BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015416
(407 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356516061|ref|XP_003526715.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Glycine max]
Length = 632
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/366 (71%), Positives = 309/366 (84%), Gaps = 5/366 (1%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF DP+VY YLMLG R D DGV RL+EEL+E+LGGVV DGVV+G LMKGYF+KGME
Sbjct: 228 RGFSPDPLVYHYLMLGHTRVSDGDGVLRLYEELRERLGGVVEDGVVFGCLMKGYFLKGME 287
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAMECY E +G+ KMSAV NSVLDAL NG+ DEAL+LFDRM E+ PPKRL+VN
Sbjct: 288 KEAMECYEEVLGKK---KMSAVGYNSVLDALSKNGRLDEALRLFDRMMKEYEPPKRLSVN 344
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYR-CSPDTLSFNNLIDQLCKNGMLAEAEELY 182
LGSFNV+ DGYCG+GRF++A+EVFRK+GEYR CSPDTLSFNNLI++LC NG + EAEE+Y
Sbjct: 345 LGSFNVIVDGYCGEGRFEEAMEVFRKIGEYRGCSPDTLSFNNLIERLCDNGRIVEAEEVY 404
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
GEM KGV+PDE+TYGLLMDACF NR DD A YFRKMVDSGLRPNLAVYNRLV LV+V
Sbjct: 405 GEMEGKGVSPDEFTYGLLMDACFRENRADDSAAYFRKMVDSGLRPNLAVYNRLVDGLVKV 464
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
G +DEAK FF++MVKKLKMD ASY+FMMK LSD G+LDE+L+IV +LDD G++F EE Q
Sbjct: 465 GKIDEAKGFFELMVKKLKMDVASYQFMMKVLSDEGRLDEMLQIVDTLLDDNGVDFDEEFQ 524
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLIPSK-FGD 361
EFVKGEL KEGREEE+ KL+E+KER KAEAKA++ EAAEAAKRSARAA+ASL+PSK FG+
Sbjct: 525 EFVKGELRKEGREEELTKLIEEKERLKAEAKAKDIEAAEAAKRSARAAVASLLPSKLFGN 584
Query: 362 KVGGTE 367
K +E
Sbjct: 585 KETDSE 590
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 23/218 (10%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNE--HNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+ +N V + K D AL+ + + N+ NP + ++ V+ G + +
Sbjct: 164 ITHNLVFQTYLDCRKPDTALEHYKQFLNDAPMNP------SPTTYRVLIKGLIDNNKLER 217
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCK----NGMLAEAEELYGEMSDKGVNPDEYTYG 198
A+E+ +M SPD L ++ L+ + +G+L EEL + GV D +G
Sbjct: 218 ALEIKTEMDSRGFSPDPLVYHYLMLGHTRVSDGDGVLRLYEELRERLG--GVVEDGVVFG 275
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV-YNRLVGKLVQVGMLDEAKSFFDIMV- 256
LM F + + +++ G + AV YN ++ L + G LDEA FD M+
Sbjct: 276 CLMKGYFLKGMEKEAMECYEEVL--GKKKMSAVGYNSVLDALSKNGRLDEALRLFDRMMK 333
Query: 257 -----KKLKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
K+L ++ S+ ++ G+ +E +E+ I
Sbjct: 334 EYEPPKRLSVNLGSFNVIVDGYCGEGRFEEAMEVFRKI 371
>gi|449456969|ref|XP_004146221.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Cucumis sativus]
gi|449511036|ref|XP_004163845.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Cucumis sativus]
Length = 624
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 277/397 (69%), Positives = 322/397 (81%), Gaps = 5/397 (1%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF DP++Y YLM G VR D DGVF+LFEELKEKLG V DGVVYG+LMKGYFMK
Sbjct: 232 MIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMK 291
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
MEEEAM+CY E VG+NS VKMSA+A NSVLDALC NGKF EAL LFDRM EH PP+ L
Sbjct: 292 EMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHL 351
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
AVNLGSFNVM DGYC +GRFK+AIEVF KMG+YRC PDTLSFNNLI+QLC NGMLAEAE
Sbjct: 352 AVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEM 411
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LYG M DKGVNPDE+TYGLLMD+CF+ NR DD A YFRKMVDSGLRPN+AVYN LV +LV
Sbjct: 412 LYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELV 471
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
++G +D+AKSFFD+MVKKLKMD +SY+F+MKALS+ GK+DEIL +V +LDD GIEFSEE
Sbjct: 472 KLGKIDDAKSFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEE 531
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLIPSK-F 359
LQEFV+GEL KE REE++ KL+E+KER KAEAKA+EAEAAEA KRSA+AA++SL+ SK F
Sbjct: 532 LQEFVRGELRKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLF 591
Query: 360 GDKVGGTEMADNANANEAASVAEAQAGKEVNLEEATA 396
+K G E + NE SV + + L E++
Sbjct: 592 ANKEGEKE----SVVNEMQSVEQEDDSGKTELAESSP 624
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 99/254 (38%), Gaps = 51/254 (20%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S+ + + N+VL+A K+ + L L + P N+ + N++ Y
Sbjct: 129 SNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVP-----NIITHNLIFQTYLDC 183
Query: 138 GRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
+ A+E ++++ + +P ++ LI L N L A EL EM +KG PD
Sbjct: 184 RKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPDPLI 243
Query: 197 YGLLMDAC------------FEVNRVDDGAT-------------YFRKMV---------- 221
Y LM C FE + GAT YF K +
Sbjct: 244 YHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKCYEE 303
Query: 222 ----DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK------LKMDDASYKFMMK 271
+S ++ + YN ++ L + G EA + FD M K+ L ++ S+ M+
Sbjct: 304 TVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNVMVD 363
Query: 272 ALSDGGKLDEILEI 285
G+ E +E+
Sbjct: 364 GYCIEGRFKEAIEV 377
>gi|307135874|gb|ADN33740.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 624
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 271/389 (69%), Positives = 320/389 (82%), Gaps = 11/389 (2%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKGF DP++Y YLM G VR D DGVF+LFEELKEKLGG V DGVVYG+LMKGYFMK
Sbjct: 232 MIVKGFAPDPLIYHYLMAGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGNLMKGYFMK 291
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
MEEEAM+CY E VG+N VKMSA+A NSVLDALC +GKF EAL LFDRM EH PP+ L
Sbjct: 292 EMEEEAMKCYEETVGDNPVVKMSAIAYNSVLDALCKHGKFSEALTLFDRMTKEHRPPRHL 351
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
AVNLG+FNVM DGYC +GRFK+AI VF +MG+YRCSPDTLSFNNLI+QLC NGMLAEAE
Sbjct: 352 AVNLGTFNVMVDGYCIKGRFKEAIGVFEEMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEM 411
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LYG M +KGVNPDE+TYGLLM +CF+ NR DD A YFRKMVDSGLRPN+AVYN LVG+LV
Sbjct: 412 LYGTMGEKGVNPDEFTYGLLMHSCFQKNRADDAAAYFRKMVDSGLRPNIAVYNILVGELV 471
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
++G +DEAKSFFD+MVKKLKMD ++Y+F+MKALS+ GK+DE+L +V +LDD GIEFSEE
Sbjct: 472 KLGKVDEAKSFFDLMVKKLKMDASNYQFIMKALSESGKMDEVLNVVDTLLDDDGIEFSEE 531
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLIPSK-F 359
LQEFV+GEL KE REE++ KL+E+KER KAEAKA+EAEAAEA KRSA+AA++SL+ SK F
Sbjct: 532 LQEFVRGELRKEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLF 591
Query: 360 GDKVGGTEMADNANANEAASVAEAQAGKE 388
+K G E + V E Q+G++
Sbjct: 592 ANKEGEKE----------SVVNEMQSGQQ 610
>gi|255551261|ref|XP_002516677.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544172|gb|EEF45696.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 290/407 (71%), Positives = 338/407 (83%), Gaps = 8/407 (1%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYFMKG 61
V+GF DP+VY YLM+G VR+ DS+GVFRLF+ELKEK+GG V+ DGVVYG LMKGYFMKG
Sbjct: 240 VRGFTPDPLVYHYLMVGCVRNLDSEGVFRLFDELKEKMGGGVIEDGVVYGDLMKGYFMKG 299
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
ME EAMECY EAVGENS V+M+AVA NSVLDALC NGKFD ALKLFDRM +HNPP+ LA
Sbjct: 300 MENEAMECYEEAVGENSKVRMNAVAYNSVLDALCKNGKFDVALKLFDRMLQQHNPPRYLA 359
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
VNLGSFNV+ DGYC QGRF+DAI+VFRKMG+YRCSPD LS+NNLIDQLCKNGML EAE+L
Sbjct: 360 VNLGSFNVIVDGYCAQGRFEDAIDVFRKMGDYRCSPDVLSYNNLIDQLCKNGMLVEAEDL 419
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
YGEM KGV PDEYTYGLLMD C E +RVDDGA YFRKMVD+GLRPNLAVYNRLV KLV+
Sbjct: 420 YGEMDGKGVKPDEYTYGLLMDTCLEKDRVDDGAGYFRKMVDTGLRPNLAVYNRLVDKLVK 479
Query: 242 VGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+ +DEAKSF+ +MVKKLKMD+ASYKFMM+AL+D ++DE++++V G+LDD IE EL
Sbjct: 480 LKKIDEAKSFYYLMVKKLKMDNASYKFMMEALADNDQMDELIKMVDGMLDDEAIELDLEL 539
Query: 302 QEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLIPSK-FG 360
QEF K L + GR EE+++LMEKKE+EKAEAKA+EAEAAEAAKRSA+AA+ASL+PSK FG
Sbjct: 540 QEFAKELLGRVGRGEELMELMEKKEKEKAEAKAKEAEAAEAAKRSAKAAVASLLPSKLFG 599
Query: 361 DKVGGTEMAD-NANANEAASVAEAQAGKEVNLEEATAVESASADANT 406
+K TE + N N +EAASV E +EEAT V S AD NT
Sbjct: 600 NKEAETESKEANGNGSEAASVNEGAP-----VEEATIVGSVPADMNT 641
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 123/284 (43%), Gaps = 45/284 (15%)
Query: 41 GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF 100
G+ + + + + + Y + A+E Y + + + + S ++ L +NGK
Sbjct: 169 AGIAPNIITHNLIFQTYLDCRKPDTALEHYKQLIND-APFNPSPTTYRILIKGLVDNGKV 227
Query: 101 DEALKLFDRMKNEHN-PPKRLAVNL------------GSFNV------------------ 129
D+AL+L D + P L + G F +
Sbjct: 228 DKALELKDEIIGVRGFTPDPLVYHYLMVGCVRNLDSEGVFRLFDELKEKMGGGVIEDGVV 287
Query: 130 ---MADGYCGQGRFKDAIEVFRK-MGE-YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ GY +G +A+E + + +GE + + +++N+++D LCKNG A +L+
Sbjct: 288 YGDLMKGYFMKGMENEAMECYEEAVGENSKVRMNAVAYNSVLDALCKNGKFDVALKLFDR 347
Query: 185 MSDKGVNPDEY------TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
M + NP Y ++ +++D R +D FRKM D P++ YN L+ +
Sbjct: 348 MLQQH-NPPRYLAVNLGSFNVIVDGYCAQGRFEDAIDVFRKMGDYRCSPDVLSYNNLIDQ 406
Query: 239 LVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDE 281
L + GML EA+ + M K +K D+ +Y +M + ++D+
Sbjct: 407 LCKNGMLVEAEDLYGEMDGKGVKPDEYTYGLLMDTCLEKDRVDD 450
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+N I L + L EA P YT +++A ++ D + R ++
Sbjct: 108 LHNRILTLIRENDLDEAALFTRHSVYSNCRPTIYTVNAVLNAQLRQSKYSDLLSLHRFII 167
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA--SYKFMMKALSDGGKL 279
+G+ PN+ +N + + D A + ++ + + +Y+ ++K L D GK+
Sbjct: 168 QAGIAPNIITHNLIFQTYLDCRKPDTALEHYKQLINDAPFNPSPTTYRILIKGLVDNGKV 227
Query: 280 DEILEI 285
D+ LE+
Sbjct: 228 DKALEL 233
>gi|356509257|ref|XP_003523367.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Glycine max]
Length = 631
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/360 (73%), Positives = 306/360 (85%), Gaps = 4/360 (1%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF DP+VY YLMLG R D D + RL+EEL+E+LGGVV DG+V+G LMKGYF+KGME
Sbjct: 228 KGFAPDPLVYHYLMLGHARVSDGDAILRLYEELRERLGGVVQDGIVFGCLMKGYFVKGME 287
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAMECY EA+G+ KMSAV NSVLDAL NG+FDEAL+LFDRM EH P KRL+VN
Sbjct: 288 KEAMECYEEALGKK---KMSAVGYNSVLDALSKNGRFDEALRLFDRMMKEHEPLKRLSVN 344
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
LGSFNV+ DGYC +GRF++A+EVFRKMGEYRCSPDTLSFNNLID+LC NG + EAEE+YG
Sbjct: 345 LGSFNVIVDGYCDEGRFEEAMEVFRKMGEYRCSPDTLSFNNLIDRLCDNGRIVEAEEVYG 404
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KGV+PDE+TYGLLMDACF NR DD A YFRKMVDSGLRPNLAVYNRLVG LV+VG
Sbjct: 405 EMEGKGVSPDEFTYGLLMDACFRENRADDAAAYFRKMVDSGLRPNLAVYNRLVGGLVKVG 464
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+DEAK FF++MVKKLKMD SY+F+MK LSD G+LDE+L+IV +LDD G++F EE QE
Sbjct: 465 KIDEAKGFFELMVKKLKMDVTSYQFIMKVLSDEGRLDEMLKIVDTLLDDNGVDFDEEFQE 524
Query: 304 FVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLIPSK-FGDK 362
FVKGEL KEGREEE+ KLME+KER KAEAKA+E EAAEAAKRSARAA+ASL+PSK FG+K
Sbjct: 525 FVKGELRKEGREEELTKLMEEKERLKAEAKAKEIEAAEAAKRSARAAVASLLPSKLFGNK 584
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 18/216 (8%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S+ + + N+VL AL ++ + L L + P N+ + N++ Y
Sbjct: 122 SNCRPTIFTINAVLAALLRQSRYSDLLSLHRFITQAGVVP-----NIITHNLVFQTYLDC 176
Query: 138 GRFKDAIEVFRK-MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
+ A+E +++ + + +P ++ LI L N L A ++ EM KG PD
Sbjct: 177 RKPDTALEHYKQFLNDAPMNPSPTTYRVLIKGLIDNSKLERAMDIKTEMDSKGFAPDPLV 236
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA-------VYNRLVGKLVQVGMLDEAK 249
Y LM RV DG R + LR L V+ L+ GM EA
Sbjct: 237 YHYLM---LGHARVSDGDAILR--LYEELRERLGGVVQDGIVFGCLMKGYFVKGMEKEAM 291
Query: 250 SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
++ + K KM Y ++ ALS G+ DE L +
Sbjct: 292 ECYEEALGKKKMSAVGYNSVLDALSKNGRFDEALRL 327
>gi|297816148|ref|XP_002875957.1| EMB1796 [Arabidopsis lyrata subsp. lyrata]
gi|297321795|gb|EFH52216.1| EMB1796 [Arabidopsis lyrata subsp. lyrata]
Length = 632
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/383 (66%), Positives = 309/383 (80%), Gaps = 2/383 (0%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G V DPVVYSYLM+G V++ D+DGV +L+EELKEKLGG V DGVVYG LMKGYFMK
Sbjct: 230 MGVRGLVVDPVVYSYLMMGCVKNSDADGVLKLYEELKEKLGGFVDDGVVYGQLMKGYFMK 289
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
ME+EAMECY EA+GENS V+MSA+A N VL+AL NGKFDEALKLFD +K EHNPP+RL
Sbjct: 290 EMEKEAMECYEEAIGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRRL 349
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
AVNLG+FNV+ DGYC +GR+++A+EVFR+MG+YRCSPDTLSFNNL++QLC NG+LAEAE+
Sbjct: 350 AVNLGTFNVVVDGYCAEGRYEEAMEVFRQMGDYRCSPDTLSFNNLMNQLCDNGLLAEAEK 409
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LYGEM +K V PDEYTYGLLMD CF+ ++D+GA Y++ MV+S LRPNLAVYNRL +L+
Sbjct: 410 LYGEMEEKKVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLI 469
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+ G LD+AKSFFD+MV KLKMDD +YKF+M+ALS+ G+LDE+L+IV +LDD + SEE
Sbjct: 470 KAGKLDDAKSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEE 529
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLIPSKFG 360
LQEFVK EL K GRE ++ KLME+KER KAEAKA+E AE K+S IASLI K
Sbjct: 530 LQEFVKEELRKGGREGDLEKLMEEKERLKAEAKAKELAEAEEKKKSQSINIASLITPKAV 589
Query: 361 DKVGGTEMADNANANEAASVAEA 383
++ E A NEA SV EA
Sbjct: 590 EE--KKETAKLLWENEAGSVEEA 610
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C P + N ++ + +L+G ++ G+ P+ TY L+ A +V + +
Sbjct: 129 CRPTIFTVNAVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIAL 188
Query: 215 TYFRKMVDSG-LRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKA 272
+++ +D+ L P+LA Y LV LV L++A D+ V+ L +D Y ++M
Sbjct: 189 EHYKLFIDNAPLNPSLATYRILVKGLVSNDNLEKAMEIKEDMGVRGLVVDPVVYSYLMMG 248
Query: 273 LSDGGKLDEILEI-------VGGILDDGGIEFSEELQEFVKGELSKEGRE 315
D +L++ +GG +DDG + + + ++ + E+ KE E
Sbjct: 249 CVKNSDADGVLKLYEELKEKLGGFVDDGVV-YGQLMKGYFMKEMEKEAME 297
>gi|15229107|ref|NP_190493.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183725|sp|Q9M3A8.1|PP273_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49240; AltName: Full=Protein EMBRYO DEFECTIVE 1796
gi|6723394|emb|CAB66403.1| putative protein [Arabidopsis thaliana]
gi|20466250|gb|AAM20442.1| putative protein [Arabidopsis thaliana]
gi|31711738|gb|AAP68225.1| At3g49240 [Arabidopsis thaliana]
gi|58013028|gb|AAW62967.1| mitochondrial embryo-defective 1796 [Arabidopsis thaliana]
gi|332644993|gb|AEE78514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/383 (65%), Positives = 307/383 (80%), Gaps = 2/383 (0%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKGFV DPVVYSYLM+G V++ D+DGV +L++ELKEKLGG V DGVVYG LMKGYFMK
Sbjct: 227 MAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMK 286
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
ME+EAMECY EAVGENS V+MSA+A N VL+AL NGKFDEALKLFD +K EHNPP+ L
Sbjct: 287 EMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHL 346
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
AVNLG+FNVM +GYC G+F++A+EVFR+MG+++CSPDTLSFNNL++QLC N +LAEAE+
Sbjct: 347 AVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEK 406
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LYGEM +K V PDEYTYGLLMD CF+ ++D+GA Y++ MV+S LRPNLAVYNRL +L+
Sbjct: 407 LYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLI 466
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+ G LD+AKSFFD+MV KLKMDD +YKF+M+ALS+ G+LDE+L+IV +LDD + SEE
Sbjct: 467 KAGKLDDAKSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEE 526
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLIPSKFG 360
LQEFVK EL K GRE ++ KLME+KER KAEAKA+E AE K++ IA+LIP K
Sbjct: 527 LQEFVKEELRKGGREGDLEKLMEEKERLKAEAKAKELADAEEKKKAQSINIAALIPPKAV 586
Query: 361 DKVGGTEMADNANANEAASVAEA 383
++ E A NEA V EA
Sbjct: 587 EE--KKETAKLLWENEAGGVEEA 607
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C P + N ++ + +L+G ++ G+ P+ TY L+ A +V + +
Sbjct: 126 CRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIAL 185
Query: 215 TYFRKMVDSG-LRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKA 272
+++ +D+ L P++A + LV LV L++A D+ VK +D Y ++M
Sbjct: 186 EHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMG 245
Query: 273 LSDGGKLDEILEI-------VGGILDDGGIEFSEELQEFVKGELSKEGRE 315
D +L++ +GG +DDG + + + ++ + E+ KE E
Sbjct: 246 CVKNSDADGVLKLYQELKEKLGGFVDDGVV-YGQLMKGYFMKEMEKEAME 294
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 10/176 (5%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L ++ +F ++ G + A+E+ M D + ++ L+ KN
Sbjct: 197 LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVL 256
Query: 180 ELYGEMSDK--GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV--DSGLRPNLAVYNRL 235
+LY E+ +K G D YG LM F + + + V +S +R + YN +
Sbjct: 257 KLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYV 316
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK------LKMDDASYKFMMKALSDGGKLDEILEI 285
+ L + G DEA FD + K+ L ++ ++ M+ GGK +E +E+
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEV 372
>gi|224118282|ref|XP_002317780.1| predicted protein [Populus trichocarpa]
gi|222858453|gb|EEE96000.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 258/355 (72%), Positives = 296/355 (83%), Gaps = 2/355 (0%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGS--LMKGYFMK 60
+KGF DPV+Y YLM+G VR GDSD VFRL+EELKEK+GG V V LMKGYFM+
Sbjct: 234 IKGFSPDPVIYHYLMVGCVRSGDSDSVFRLYEELKEKMGGEVVGNGVVVYGGLMKGYFMR 293
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM++EAMECY E + EN K SAVANNSVLDALC NG+FDEALKLF+RM EHNPPK L
Sbjct: 294 GMKKEAMECYGEFLRENLRGKWSAVANNSVLDALCKNGEFDEALKLFERMLREHNPPKSL 353
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
V+LGSFNVM DGYC +GR+KDAIEV KMG+YRC+PDTLSFNNLIDQLC NGML EAE
Sbjct: 354 VVDLGSFNVMVDGYCLEGRYKDAIEVLLKMGDYRCNPDTLSFNNLIDQLCSNGMLVEAET 413
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+YGEM KGV PDEYTY LLMD C + NR+DDGA YFRKMV+SG RPNLAVYNRLV +LV
Sbjct: 414 VYGEMDGKGVKPDEYTYVLLMDTCIKENRIDDGAAYFRKMVESGSRPNLAVYNRLVDELV 473
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+VG +DEAKSF+D+MVKKLKMDD SYKFMMK +SD GKLDE+L++ GI+DD EFSEE
Sbjct: 474 KVGKIDEAKSFYDMMVKKLKMDDESYKFMMKTMSDVGKLDEVLKMAEGIIDDEEAEFSEE 533
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLI 355
LQEFVKGEL K+GREEE+ KL+E+KER+KAEAKA+E EAAEA+KRSA+A I SLI
Sbjct: 534 LQEFVKGELRKDGREEELTKLLEEKERQKAEAKAKEVEAAEASKRSAKAVINSLI 588
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 4/169 (2%)
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMS-DKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
+ L+ +N I L + L EA LY S P T +++A ++ D +
Sbjct: 98 NRLNLHNKILTLIRENDLEEAA-LYTRHSVYSNCKPTICTVNAVLNAQLRQSKYSDLLSL 156
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMMKALS 274
R + +G+ N+ +N L + D A ++ MV + L +Y+ M+K L
Sbjct: 157 HRFITQAGIAANVITHNLLFQTYLDCRKPDTALEYYKQMVNEAPLSPSPTTYRIMIKGLV 216
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
D GKL++ LE+ ++ G + ++ + G + V +L E
Sbjct: 217 DNGKLEKALELKDEMIAIKGFSPDPVIYHYLMVGCVRSGDSDSVFRLYE 265
>gi|357463931|ref|XP_003602247.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491295|gb|AES72498.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 704
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/327 (71%), Positives = 269/327 (82%), Gaps = 2/327 (0%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GF DP+VY YLMLG R D DGV R++EELKEKLGGVV DGVV G LMKGYF+K
Sbjct: 232 MNASGFAPDPLVYHYLMLGHARSSDGDGVLRVYEELKEKLGGVVEDGVVLGCLMKGYFLK 291
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GME+EAMECY E E KMS +A NSVLDAL NGKFDEA++LFDRM EHNPP +L
Sbjct: 292 GMEKEAMECYQEVFVEGK--KMSDIAYNSVLDALAKNGKFDEAMRLFDRMIKEHNPPAKL 349
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
AVNLGSFNVM DGYC +G+FK+AIEVFR MGE RC PDTLSFNNLI+QLC NGM+ EAEE
Sbjct: 350 AVNLGSFNVMVDGYCAEGKFKEAIEVFRSMGESRCKPDTLSFNNLIEQLCNNGMILEAEE 409
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+YGEM KGVNPDEYTYGLLMD CF+ NR DD A+YF+KMV+SGLRPNLAVYNRLV LV
Sbjct: 410 VYGEMEGKGVNPDEYTYGLLMDTCFKENRPDDAASYFKKMVESGLRPNLAVYNRLVDGLV 469
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+VG +D+AK FFD+MVKKLKMD ASY+FMMK LS+ G+LD++L+IV +LDD G++F EE
Sbjct: 470 KVGKIDDAKFFFDLMVKKLKMDVASYQFMMKVLSEAGRLDDVLQIVNMLLDDNGVDFDEE 529
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKER 327
QEFVK EL KEGREE++ KLME+KER
Sbjct: 530 FQEFVKVELRKEGREEDLAKLMEEKER 556
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSD-KGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
++ +N I L + L EA LY S P +T ++ A F +R D + R
Sbjct: 101 VNLHNTILTLIRQNDLDEAA-LYTRHSIYSNCRPTIFTINAVLFALFRQSRYSDLLSLHR 159
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA--SYKFMMKALSDG 276
+ +G+ PN+ YN + + D A F +K + + +++ ++K L D
Sbjct: 160 FITQAGVVPNIITYNLIFQTYLDCRKPDTALENFKQFIKDAPFNPSPTTFRILIKGLVDN 219
Query: 277 GKLDEILEI 285
+LD ++I
Sbjct: 220 NRLDRAMDI 228
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 95/240 (39%), Gaps = 49/240 (20%)
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
+N++L L DEA L+ R H+ + + N + Q R+ D + +
Sbjct: 104 HNTIL-TLIRQNDLDEA-ALYTR----HSIYSNCRPTIFTINAVLFALFRQSRYSDLLSL 157
Query: 147 FRKMGEYRCSPDTLSFNNLIDQL---CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
R + + P+ +++N LI Q C+ A E + D NP T+ +L+
Sbjct: 158 HRFITQAGVVPNIITYN-LIFQTYLDCRKPDTA-LENFKQFIKDAPFNPSPTTFRILIKG 215
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL-----------------------VGKLV 240
+ NR+D +M SG P+ VY+ L +G +V
Sbjct: 216 LVDNNRLDRAMDIKDQMNASGFAPDPLVYHYLMLGHARSSDGDGVLRVYEELKEKLGGVV 275
Query: 241 QVGML---------------DEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ G++ + + + ++ V+ KM D +Y ++ AL+ GK DE + +
Sbjct: 276 EDGVVLGCLMKGYFLKGMEKEAMECYQEVFVEGKKMSDIAYNSVLDALAKNGKFDEAMRL 335
>gi|225455374|ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Vitis vinifera]
Length = 672
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/363 (72%), Positives = 312/363 (85%), Gaps = 2/363 (0%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF ADPVVYSYLMLG VR+ ++DGVF L+EELKEKLG V VV GSLMKGYF++
Sbjct: 227 MLGKGFAADPVVYSYLMLGHVRNLNADGVFELYEELKEKLGDVDDGVVV-GSLMKGYFLR 285
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GME+EAM+CY EAVGE S ++MSAVA NSVLDAL NGKFDEA+ LF+RM E+NPP+RL
Sbjct: 286 GMEKEAMQCYAEAVGEGSKIRMSAVAFNSVLDALSKNGKFDEAMLLFERMMAEYNPPRRL 345
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++NLGSFNVM DG+C GRFKDAIEVFRKMGE RCS DTLS+NNLI+QLC NGMLAEAEE
Sbjct: 346 SMNLGSFNVMVDGFCTAGRFKDAIEVFRKMGEKRCSADTLSYNNLIEQLCNNGMLAEAEE 405
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LYGEM++KGVNPDE+TY LLMD CF+ NR DDGA YFRKMV++GLRPNLAVY++LV LV
Sbjct: 406 LYGEMANKGVNPDEFTYVLLMDTCFKENRTDDGAGYFRKMVETGLRPNLAVYSKLVDGLV 465
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+VG +DEAKSF+D+MVKKLKMD+ASYKF+MKAL + GK D++L+++G +LDD EF+ +
Sbjct: 466 KVGKIDEAKSFYDLMVKKLKMDEASYKFLMKALFEVGKHDDVLKMIGDMLDDDASEFTTD 525
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLIPSK-F 359
LQEFVK EL KEGREE+VVKLME KEREKAEA+A+EA A EAAK SA+AA++SL+PSK F
Sbjct: 526 LQEFVKEELRKEGREEDVVKLMEDKEREKAEAQAKEAAATEAAKASAKAAVSSLLPSKLF 585
Query: 360 GDK 362
G K
Sbjct: 586 GSK 588
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
S + L+ +N I L + L EA L P +T ++ A +R D +
Sbjct: 92 SGNRLNLHNRILGLIRVNDLDEAALLTRHSIYSNCRPTIFTVNSVLAALLRQSRYSDLLS 151
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA--SYKFMMKAL 273
R + +G+ N+ +N L+ + D A + ++ + + +Y+ ++K +
Sbjct: 152 LHRFITQAGVAANVVTHNLLINAYLDCRKTDTALEHYKQLINDAPFNPSPTTYRILIKGI 211
Query: 274 SDGGKLDEILEIVGGILDDG 293
D GK++ LE+ +L G
Sbjct: 212 VDNGKVERALELKEEMLGKG 231
>gi|357135408|ref|XP_003569301.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Brachypodium distachyon]
Length = 665
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 1 MFVKGFVA-DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M +GFVA DP VY+++M GFV GD D V L+EELKEKLGG + DGVVYG+LMKGYF
Sbjct: 227 MLERGFVAPDPQVYAFIMGGFVNAGDGDTVISLYEELKEKLGGGSILDGVVYGNLMKGYF 286
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+K ME+EAM+CY+E +G+ SSV+ AV+ N VLDAL NGK ++A++LFDRM EH+PP+
Sbjct: 287 LKSMEKEAMDCYHEVLGDGSSVRFGAVSYNMVLDALGRNGKLEDAVQLFDRMCKEHDPPR 346
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
R+AVNLGSFNVM D YC RF+DA+EVF KMGE RCSPD LS+NNLID L +N ++ EA
Sbjct: 347 RIAVNLGSFNVMVDAYCRAERFQDAVEVFGKMGEKRCSPDALSYNNLIDWLGRNELVGEA 406
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E LY EM ++ +NPDEYTY LL+++C +V+RVDD YF KM D GLRPN +N+++G
Sbjct: 407 EGLYNEMGERSINPDEYTYVLLIESCLKVDRVDDAVGYFNKMFDVGLRPNANAFNKVIGG 466
Query: 239 LVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
LV+V LDEA FFD+M K++K + ASY+ +++A +D +LD+ +++ G+L D + F
Sbjct: 467 LVKVDRLDEAHRFFDLMPEKEVKPNIASYELLLRAYTDVARLDDAIKMAKGVLLDESVVF 526
Query: 298 SEELQEFVKGELSKEGREEEVVKLME 323
++EL+ ++G L KEGR E++ KL E
Sbjct: 527 TDELKAVLEGALEKEGRNEDMTKLYE 552
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 3/168 (1%)
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
L + I L + L EA L P +T ++ A R D T R
Sbjct: 95 LDLHRRILTLVRENDLEEAALLTRHSIYSNCRPTVFTCNAVLAAQLRQARYADLLTLHRF 154
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK---KLKMDDASYKFMMKALSDG 276
+ + + P +A +N L+ + A F +++K + +Y+ + ++L++
Sbjct: 155 VTQASVAPTVATHNILLQAYCDCRRPETALEHFRLLLKDDSPVLPSPTTYRILARSLAEN 214
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
KLD LE+ G+L+ G + ++ F+ G G + V+ L E+
Sbjct: 215 SKLDLALELKDGMLERGFVAPDPQVYAFIMGGFVNAGDGDTVISLYEE 262
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 90/217 (41%), Gaps = 14/217 (6%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S+ + + N+VL A ++ + L L R + + +A + + N++ YC
Sbjct: 123 SNCRPTVFTCNAVLAAQLRQARYADLLTLH-RFVTQAS----VAPTVATHNILLQAYCDC 177
Query: 138 GRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VNPDE 194
R + A+E FR + + P ++ L L +N L A EL M ++G V PD
Sbjct: 178 RRPETALEHFRLLLKDDSPVLPSPTTYRILARSLAENSKLDLALELKDGMLERGFVAPDP 237
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKM---VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
Y +M D + + ++ + G + VY L+ M EA
Sbjct: 238 QVYAFIMGGFVNAGDGDTVISLYEELKEKLGGGSILDGVVYGNLMKGYFLKSMEKEAMDC 297
Query: 252 FDIMV---KKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ ++ ++ SY ++ AL GKL++ +++
Sbjct: 298 YHEVLGDGSSVRFGAVSYNMVLDALGRNGKLEDAVQL 334
>gi|326530248|dbj|BAJ97550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 179/329 (54%), Positives = 243/329 (73%), Gaps = 3/329 (0%)
Query: 1 MFVKGFVA-DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M +G +A DP VY+++M GFV GD D L+EELKEKLGG ++ DGVVYG+LMKGYF
Sbjct: 227 MLERGLIAPDPQVYAFVMGGFVNAGDGDTAVSLYEELKEKLGGGLILDGVVYGNLMKGYF 286
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+KGME+EAM+CY E +GE S V+ AV+ N VLDAL NG+ D+A++LFDRM EH+PP+
Sbjct: 287 LKGMEKEAMDCYTEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDAVELFDRMCKEHDPPR 346
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
R+AVNLGSFNVM D YCG RF+DAIEVF KMGE C+PD LS+N+LI+ L KN ++ EA
Sbjct: 347 RIAVNLGSFNVMVDAYCGVERFQDAIEVFGKMGEKSCTPDALSYNSLINWLGKNKLVGEA 406
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EELY EM ++G+NPDEYTY LL+++CF V+ VDD YF KM D GLRPN +N+++
Sbjct: 407 EELYKEMGERGINPDEYTYVLLIESCFRVDNVDDAVGYFSKMFDVGLRPNANAFNKVISG 466
Query: 239 LVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
LV+V +DEA+ FFD+M K++K + AS + +++A + +LD+ +++ GIL D I F
Sbjct: 467 LVKVDRIDEAQGFFDLMTEKEVKPNIASCESLLRAYINVARLDDAIKMAKGILLDESIVF 526
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKE 326
++EL+ ++G L KEGR ++ KL E E
Sbjct: 527 TDELKALLEGALEKEGRNGDMTKLYEDVE 555
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 14/217 (6%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S+ + + N+VL AL ++ + L L R + + +A + + N++ YC
Sbjct: 123 SNCRPTVFTCNTVLAALLRQARYADLLSLH-RFVTQAS----VAPTVATHNLLLQAYCDC 177
Query: 138 GRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VNPDE 194
R + A+E FR + + P ++ L L +NG L A EL M ++G + PD
Sbjct: 178 RRPETALEHFRLLLKDDSPLLPSPTTYRILARSLAENGKLDLALELKDGMLERGLIAPDP 237
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKM---VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
Y +M D + + ++ + GL + VY L+ GM EA
Sbjct: 238 QVYAFVMGGFVNAGDGDTAVSLYEELKEKLGGGLILDGVVYGNLMKGYFLKGMEKEAMDC 297
Query: 252 FDIMV---KKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ ++ K++ SY ++ AL G+LD+ +E+
Sbjct: 298 YTEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDAVEL 334
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 3/168 (1%)
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
L + I L + L EA L P +T ++ A R D + R
Sbjct: 95 LDLHRRILTLVRENDLDEAALLTRHSIYSNCRPTVFTCNTVLAALLRQARYADLLSLHRF 154
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK---KLKMDDASYKFMMKALSDG 276
+ + + P +A +N L+ + A F +++K L +Y+ + ++L++
Sbjct: 155 VTQASVAPTVATHNLLLQAYCDCRRPETALEHFRLLLKDDSPLLPSPTTYRILARSLAEN 214
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
GKLD LE+ G+L+ G I ++ FV G G + V L E+
Sbjct: 215 GKLDLALELKDGMLERGLIAPDPQVYAFVMGGFVNAGDGDTAVSLYEE 262
>gi|125534241|gb|EAY80789.1| hypothetical protein OsI_35969 [Oryza sativa Indica Group]
Length = 515
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 240/326 (73%), Gaps = 3/326 (0%)
Query: 1 MFVKGFVA-DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M +G VA DP VY+ +M GFV GD D V L+EEL EKLGG + DG+VYG+LM GYF
Sbjct: 89 MLERGLVAPDPQVYALVMGGFVNAGDGDTVVSLYEELVEKLGGGQILDGMVYGNLMNGYF 148
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ GM+ EA+ CY E +GE S V+ AV+ N VLDAL NGK D+AL+LFDRM EH+PP+
Sbjct: 149 LNGMDNEALHCYAEVLGEGSKVRFGAVSYNMVLDALGRNGKLDDALQLFDRMCEEHDPPR 208
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
R+AVNLGSFNVM D YC RF+DAIEVF KMGE RC+PD LS+NNLID L KN ++ EA
Sbjct: 209 RIAVNLGSFNVMVDAYCRAERFQDAIEVFGKMGEKRCAPDALSYNNLIDWLGKNELVGEA 268
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E+LY EM ++GVNPDEYTY LL+++CF+V+RVDD YF KM D+GLRPN +N+++G
Sbjct: 269 EQLYKEMGERGVNPDEYTYVLLIESCFKVDRVDDSVAYFNKMFDAGLRPNANAFNKVIGG 328
Query: 239 LVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
LV+V LDEA+ FFD M K++K + SY+ +++A D KLD+ +++ GIL D + F
Sbjct: 329 LVKVDRLDEAQGFFDKMPEKEVKPNIGSYELLLRAYIDAVKLDDAIKMAKGILLDESVVF 388
Query: 298 SEELQEFVKGELSKEGREEEVVKLME 323
S+EL+ ++G L K+GR+ ++ KL E
Sbjct: 389 SDELKALLEGALQKDGRDGDMTKLYE 414
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+A + ++N++ YC R A+E FR + + P ++ L L +NG L +
Sbjct: 22 VAPTVATYNLLLQAYCDCRRSDTALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKLEQ 81
Query: 178 AEELYGEMSDKG-VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS---GLRPNLAVYN 233
A EL M ++G V PD Y L+M D + + ++V+ G + VY
Sbjct: 82 AIELKDGMLERGLVAPDPQVYALVMGGFVNAGDGDTVVSLYEELVEKLGGGQILDGMVYG 141
Query: 234 RLVGKLVQVGMLDEAKSFFDIMV---KKLKMDDASYKFMMKALSDGGKLDEILEI 285
L+ GM +EA + ++ K++ SY ++ AL GKLD+ L++
Sbjct: 142 NLMNGYFLNGMDNEALHCYAEVLGEGSKVRFGAVSYNMVLDALGRNGKLDDALQL 196
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK---KLKMDDAS 265
R D + R + + + P +A YN L+ D A F +++K + +
Sbjct: 6 RYADLLSLHRFVTQASVAPTVATYNLLLQAYCDCRRSDTALEHFRLLLKDDSPVLPSPTT 65
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
Y+ + ++L++ GKL++ +E+ G+L+ G + ++ V G G + VV L E+
Sbjct: 66 YRILARSLAENGKLEQAIELKDGMLERGLVAPDPQVYALVMGGFVNAGDGDTVVSLYEE 124
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 171 KNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV--DSGLRPN 228
K A+ L+ ++ V P TY LL+ A + R D +FR ++ DS + P+
Sbjct: 3 KKARYADLLSLHRFVTQASVAPTVATYNLLLQAYCDCRRSDTALEHFRLLLKDDSPVLPS 62
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMMKALSDGGKLD------ 280
Y L L + G L++A D M+++ + D Y +M + G D
Sbjct: 63 PTTYRILARSLAENGKLEQAIELKDGMLERGLVAPDPQVYALVMGGFVNAGDGDTVVSLY 122
Query: 281 -EILEIVGG--ILD 291
E++E +GG ILD
Sbjct: 123 EELVEKLGGGQILD 136
>gi|62734288|gb|AAX96397.1| expressed protein [Oryza sativa Japonica Group]
gi|77550330|gb|ABA93127.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 661
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 242/326 (74%), Gaps = 3/326 (0%)
Query: 1 MFVKGFVA-DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M +G VA DP VY+ +M GFV GD D V L+EEL EKLGG + DG+VYG+LMKGYF
Sbjct: 235 MLERGLVAPDPQVYALVMGGFVNAGDGDTVVSLYEELVEKLGGGQILDGMVYGNLMKGYF 294
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+KGME+EAM+CY E +GE S V+ AV+ N VLDAL NGK D+AL+LFDRM EH+PP+
Sbjct: 295 LKGMEKEAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGKLDDALQLFDRMCEEHDPPR 354
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
R+AVNLGSFNVM D YC RF+DAIEVF KMGE RC+PD LS+NNLID L KN ++ EA
Sbjct: 355 RIAVNLGSFNVMVDAYCRAERFQDAIEVFGKMGEKRCAPDALSYNNLIDWLGKNELVGEA 414
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E+LY EM ++GVNPDEYTY LL+++ F+V+RVDD +YF KM +GLRPN +N+++G
Sbjct: 415 EQLYKEMGERGVNPDEYTYVLLIESYFKVDRVDDSVSYFNKMFVAGLRPNANAFNKVIGG 474
Query: 239 LVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
LV+V LDEA+ FFD M K++K + SY+ +++A D +LD+ +++ IL D + F
Sbjct: 475 LVKVDRLDEAQGFFDKMPEKEVKPNIGSYELLLRAYIDAARLDDAIKMAKCILLDESVVF 534
Query: 298 SEELQEFVKGELSKEGREEEVVKLME 323
S+EL+ ++G L K+GR+ ++ KL E
Sbjct: 535 SDELKALLEGALQKDGRDGDMTKLYE 560
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 14/217 (6%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S+ + + N+VL AL ++ + L L R + + +A + ++N++ YC
Sbjct: 131 SNCRPTVFTCNAVLAALLRQARYADLLSLH-RFVTQAS----VAPTVATYNLLLQAYCDC 185
Query: 138 GRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VNPDE 194
R A+E FR + + P ++ L L +NG L +A EL M ++G V PD
Sbjct: 186 RRPDTALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKLEQAIELKDGMLERGLVAPDP 245
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDS---GLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
Y L+M D + + ++V+ G + VY L+ GM EA
Sbjct: 246 QVYALVMGGFVNAGDGDTVVSLYEELVEKLGGGQILDGMVYGNLMKGYFLKGMEKEAMDC 305
Query: 252 FDIMV---KKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ ++ K++ SY ++ AL GKLD+ L++
Sbjct: 306 YAEVLGEGSKVRFGAVSYNMVLDALGRNGKLDDALQL 342
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C P + N ++ L + A+ L+ ++ V P TY LL+ A + R D
Sbjct: 133 CRPTVFTCNAVLAALLRQARYADLLSLHRFVTQASVAPTVATYNLLLQAYCDCRRPDTAL 192
Query: 215 TYFRKMV--DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMM 270
+FR ++ DS + P+ Y L L + G L++A D M+++ + D Y +M
Sbjct: 193 EHFRLLLKDDSPVLPSPTTYRILARSLAENGKLEQAIELKDGMLERGLVAPDPQVYALVM 252
Query: 271 KALSDGGKLD-------EILEIVGG--ILD 291
+ G D E++E +GG ILD
Sbjct: 253 GGFVNAGDGDTVVSLYEELVEKLGGGQILD 282
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 3/168 (1%)
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
L + I L + L EA L P +T ++ A R D + R
Sbjct: 103 LDLHRRILALVREDDLDEAALLTRHSIYSNCRPTVFTCNAVLAALLRQARYADLLSLHRF 162
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK---KLKMDDASYKFMMKALSDG 276
+ + + P +A YN L+ D A F +++K + +Y+ + ++L++
Sbjct: 163 VTQASVAPTVATYNLLLQAYCDCRRPDTALEHFRLLLKDDSPVLPSPTTYRILARSLAEN 222
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
GKL++ +E+ G+L+ G + ++ V G G + VV L E+
Sbjct: 223 GKLEQAIELKDGMLERGLVAPDPQVYALVMGGFVNAGDGDTVVSLYEE 270
>gi|242057909|ref|XP_002458100.1| hypothetical protein SORBIDRAFT_03g026930 [Sorghum bicolor]
gi|241930075|gb|EES03220.1| hypothetical protein SORBIDRAFT_03g026930 [Sorghum bicolor]
Length = 666
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 240/326 (73%), Gaps = 3/326 (0%)
Query: 1 MFVKGFVA-DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M +G +A D VY+++M GFV GD D L+EELKEKLGG + DGVVYG+LMKGYF
Sbjct: 233 MLERGLIAPDTQVYAFIMGGFVNAGDGDKAVSLYEELKEKLGGEPILDGVVYGNLMKGYF 292
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+KGME+EAM+CY E +GE S V+ A + N VLDAL NG+ ++ALKLFDRM EH+PP+
Sbjct: 293 LKGMEKEAMDCYAEVLGEGSKVRFGATSYNMVLDALGRNGRLEDALKLFDRMCVEHDPPR 352
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+AVNLGSFNVM D YC RF+DAIEVF KM E RC+PD LS+NNLID L KN ++ EA
Sbjct: 353 TIAVNLGSFNVMVDAYCRAERFQDAIEVFGKMAEKRCAPDALSYNNLIDWLGKNELVGEA 412
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E LY EM ++GV PDEYTY LL+++CF+V+RV+D +YF KM+D+GLRPN +N+++G
Sbjct: 413 EGLYKEMGERGVKPDEYTYVLLIESCFKVDRVEDAVSYFNKMLDAGLRPNANAFNKVIGG 472
Query: 239 LVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
LV+V L EA+ FFD+M K++K + ASY+ ++KA +LD+ ++I GIL D + F
Sbjct: 473 LVKVDRLSEAQGFFDMMPEKEVKPNIASYELLLKAYVAAARLDDAIKIAKGILLDESVVF 532
Query: 298 SEELQEFVKGELSKEGREEEVVKLME 323
S+E++ ++ L KEGR+ E+ KL E
Sbjct: 533 SDEMKTLLEEALEKEGRDGEMTKLYE 558
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C P + N ++ L + A+ L+ ++ V P TY LL+ A + R D
Sbjct: 131 CRPTVFTCNAVLAALLRQARYADLLSLHRFVTQASVAPTVATYNLLLQAYCDCRRPDVAL 190
Query: 215 TYFRKMV--DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMM 270
+FR ++ DS + P+ Y L L + G LD+A D M+++ + D Y F+M
Sbjct: 191 EHFRLLLKDDSPVLPSPTTYRILARSLAENGKLDQALELKDGMLERGLIAPDTQVYAFIM 250
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGE 308
+ G D + EEL+E + GE
Sbjct: 251 GGFVNAGD------------GDKAVSLYEELKEKLGGE 276
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 3/168 (1%)
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
L + I L + L EA L P +T ++ A R D + R
Sbjct: 101 LDLHRRILTLIRENDLDEAALLTRHSIYSNCRPTVFTCNAVLAALLRQARYADLLSLHRF 160
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK---KLKMDDASYKFMMKALSDG 276
+ + + P +A YN L+ D A F +++K + +Y+ + ++L++
Sbjct: 161 VTQASVAPTVATYNLLLQAYCDCRRPDVALEHFRLLLKDDSPVLPSPTTYRILARSLAEN 220
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
GKLD+ LE+ G+L+ G I ++ F+ G G ++ V L E+
Sbjct: 221 GKLDQALELKDGMLERGLIAPDTQVYAFIMGGFVNAGDGDKAVSLYEE 268
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 14/217 (6%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S+ + + N+VL AL ++ + L L R + + +A + ++N++ YC
Sbjct: 129 SNCRPTVFTCNAVLAALLRQARYADLLSLH-RFVTQAS----VAPTVATYNLLLQAYCDC 183
Query: 138 GRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VNPDE 194
R A+E FR + + P ++ L L +NG L +A EL M ++G + PD
Sbjct: 184 RRPDVALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKLDQALELKDGMLERGLIAPDT 243
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDS-GLRPNL--AVYNRLVGKLVQVGMLDEAKSF 251
Y +M D + + ++ + G P L VY L+ GM EA
Sbjct: 244 QVYAFIMGGFVNAGDGDKAVSLYEELKEKLGGEPILDGVVYGNLMKGYFLKGMEKEAMDC 303
Query: 252 FDIMV---KKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ ++ K++ SY ++ AL G+L++ L++
Sbjct: 304 YAEVLGEGSKVRFGATSYNMVLDALGRNGRLEDALKL 340
>gi|297611745|ref|NP_001067799.2| Os11g0433600 [Oryza sativa Japonica Group]
gi|255680050|dbj|BAF28162.2| Os11g0433600, partial [Oryza sativa Japonica Group]
Length = 487
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 242/326 (74%), Gaps = 3/326 (0%)
Query: 1 MFVKGFVA-DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M +G VA DP VY+ +M GFV GD D V L+EEL EKLGG + DG+VYG+LMKGYF
Sbjct: 61 MLERGLVAPDPQVYALVMGGFVNAGDGDTVVSLYEELVEKLGGGQILDGMVYGNLMKGYF 120
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+KGME+EAM+CY E +GE S V+ AV+ N VLDAL NGK D+AL+LFDRM EH+PP+
Sbjct: 121 LKGMEKEAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGKLDDALQLFDRMCEEHDPPR 180
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
R+AVNLGSFNVM D YC RF+DAIEVF KMGE RC+PD LS+NNLID L KN ++ EA
Sbjct: 181 RIAVNLGSFNVMVDAYCRAERFQDAIEVFGKMGEKRCAPDALSYNNLIDWLGKNELVGEA 240
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E+LY EM ++GVNPDEYTY LL+++ F+V+RVDD +YF KM +GLRPN +N+++G
Sbjct: 241 EQLYKEMGERGVNPDEYTYVLLIESYFKVDRVDDSVSYFNKMFVAGLRPNANAFNKVIGG 300
Query: 239 LVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
LV+V LDEA+ FFD M K++K + SY+ +++A D +LD+ +++ IL D + F
Sbjct: 301 LVKVDRLDEAQGFFDKMPEKEVKPNIGSYELLLRAYIDAARLDDAIKMAKCILLDESVVF 360
Query: 298 SEELQEFVKGELSKEGREEEVVKLME 323
S+EL+ ++G L K+GR+ ++ KL E
Sbjct: 361 SDELKALLEGALQKDGRDGDMTKLYE 386
>gi|414881697|tpg|DAA58828.1| TPA: hypothetical protein ZEAMMB73_898527 [Zea mays]
Length = 666
Score = 353 bits (906), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 177/329 (53%), Positives = 236/329 (71%), Gaps = 3/329 (0%)
Query: 1 MFVKGFVA-DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M +G +A D VY+++M GFV GD D LFEE+KEKLGG + DGVVYG+LMKGYF
Sbjct: 232 MLERGLIAPDTQVYAFIMGGFVNAGDGDKAVSLFEEIKEKLGGESILDGVVYGNLMKGYF 291
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+KGME+EAM+CY E +GE S V+ AV+ N VLDAL NG+ D+AL LFDRM EH+PP+
Sbjct: 292 LKGMEKEAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDALNLFDRMCMEHDPPR 351
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ VNLGSFNVM D YC RF+DAIEVF KM E +C+PD LS+NNLID L KN ++ EA
Sbjct: 352 TITVNLGSFNVMVDAYCRAERFQDAIEVFGKMAEKKCAPDALSYNNLIDWLGKNKLVGEA 411
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E LY EM ++GVNPDEYTY LL+++CF+V+RV+D YF KM D+GLRPN +N+++
Sbjct: 412 EGLYKEMEERGVNPDEYTYVLLIESCFKVDRVEDAVAYFNKMFDAGLRPNANAFNKVIDG 471
Query: 239 LVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
LV+V L EA+ FFD+M K++K + ASY+ ++KA D +LD+ +++ IL D + F
Sbjct: 472 LVKVDRLSEAQGFFDMMPEKEVKPNIASYELLLKAYIDAARLDDAIKVAKCILLDESVVF 531
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKE 326
S+E + ++ L KEGR ++ KL E E
Sbjct: 532 SDETKALLEEALDKEGRNGQMTKLYEDVE 560
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C P + N ++ L + A+ L+ ++ V P TY LL+ A + R D
Sbjct: 130 CRPTVFTCNAVLAALLRQARYADLLSLHRFVTQASVAPTVATYNLLLQAYCDCRRPDVAL 189
Query: 215 TYFRKMV--DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMM 270
+FR ++ DS + P+ Y L L + G LD+A D M+++ + D Y F+M
Sbjct: 190 EHFRLLLKDDSPVLPSPTTYRILARSLAENGKLDQALELKDGMLERGLIAPDTQVYAFIM 249
Query: 271 KALSDGGK-------LDEILEIVGG--ILD 291
+ G +EI E +GG ILD
Sbjct: 250 GGFVNAGDGDKAVSLFEEIKEKLGGESILD 279
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 3/168 (1%)
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
L + I L + L EA L P +T ++ A R D + R
Sbjct: 100 LDLHRRILTLIRENDLDEAALLTRHSIYSNCRPTVFTCNAVLAALLRQARYADLLSLHRF 159
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK---KLKMDDASYKFMMKALSDG 276
+ + + P +A YN L+ D A F +++K + +Y+ + ++L++
Sbjct: 160 VTQASVAPTVATYNLLLQAYCDCRRPDVALEHFRLLLKDDSPVLPSPTTYRILARSLAEN 219
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
GKLD+ LE+ G+L+ G I ++ F+ G G ++ V L E+
Sbjct: 220 GKLDQALELKDGMLERGLIAPDTQVYAFIMGGFVNAGDGDKAVSLFEE 267
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S+ + + N+VL AL ++ + L L R + + +A + ++N++ YC
Sbjct: 128 SNCRPTVFTCNAVLAALLRQARYADLLSLH-RFVTQAS----VAPTVATYNLLLQAYCDC 182
Query: 138 GRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VNPDE 194
R A+E FR + + P ++ L L +NG L +A EL M ++G + PD
Sbjct: 183 RRPDVALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKLDQALELKDGMLERGLIAPDT 242
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDS-GLRPNL--AVYNRLVGKLVQVGMLDEAKSF 251
Y +M D + F ++ + G L VY L+ GM EA
Sbjct: 243 QVYAFIMGGFVNAGDGDKAVSLFEEIKEKLGGESILDGVVYGNLMKGYFLKGMEKEAMDC 302
Query: 252 FDIMV---KKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ ++ K++ SY ++ AL G+LD+ L +
Sbjct: 303 YAEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDALNL 339
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 97/244 (39%), Gaps = 15/244 (6%)
Query: 41 GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF 100
V Y L++ Y + A+E + + ++S V S + +L NGK
Sbjct: 163 ASVAPTVATYNLLLQAYCDCRRPDVALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKL 222
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY---RCSP 157
D+AL+L D M +A + + + G+ G A+ +F ++ E
Sbjct: 223 DQALELKDGMLER----GLIAPDTQVYAFIMGGFVNAGDGDKAVSLFEEIKEKLGGESIL 278
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGAT 215
D + + NL+ GM EA + Y E+ +G V +Y +++DA R+DD
Sbjct: 279 DGVVYGNLMKGYFLKGMEKEAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDALN 338
Query: 216 YFRKMVDSGLRP-----NLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFM 269
F +M P NL +N +V + +A F M KK D SY +
Sbjct: 339 LFDRMCMEHDPPRTITVNLGSFNVMVDAYCRAERFQDAIEVFGKMAEKKCAPDALSYNNL 398
Query: 270 MKAL 273
+ L
Sbjct: 399 IDWL 402
>gi|226531552|ref|NP_001146052.1| uncharacterized protein LOC100279583 [Zea mays]
gi|219885489|gb|ACL53119.1| unknown [Zea mays]
Length = 665
Score = 353 bits (906), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 177/329 (53%), Positives = 236/329 (71%), Gaps = 3/329 (0%)
Query: 1 MFVKGFVA-DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M +G +A D VY+++M GFV GD D LFEE+KEKLGG + DGVVYG+LMKGYF
Sbjct: 232 MLERGLIAPDTQVYAFIMGGFVNAGDGDKAVSLFEEIKEKLGGESILDGVVYGNLMKGYF 291
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+KGME+EAM+CY E +GE S V+ AV+ N VLDAL NG+ D+AL LFDRM EH+PP+
Sbjct: 292 LKGMEKEAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDALNLFDRMCMEHDPPR 351
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ VNLGSFNVM D YC RF+DAIEVF KM E +C+PD LS+NNLID L KN ++ EA
Sbjct: 352 TITVNLGSFNVMVDAYCRAERFQDAIEVFGKMAEKKCAPDALSYNNLIDWLGKNKLVGEA 411
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E LY EM ++GVNPDEYTY LL+++CF+V+RV+D YF KM D+GLRPN +N+++
Sbjct: 412 EGLYKEMEERGVNPDEYTYVLLIESCFKVDRVEDAVAYFNKMFDAGLRPNANAFNKVIDG 471
Query: 239 LVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
LV+V L EA+ FFD+M K++K + ASY+ ++KA D +LD+ +++ IL D + F
Sbjct: 472 LVKVDRLSEAQGFFDMMPEKEVKPNIASYELLLKAYIDAARLDDAIKVAKCILLDESVVF 531
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKE 326
S+E + ++ L KEGR ++ KL E E
Sbjct: 532 SDETKALLEEALDKEGRNGQMTKLYEDVE 560
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C P + N ++ L + A+ L+ ++ V P TY LL+ A + R D
Sbjct: 130 CRPTVFTCNAVLAALLRQARYADLLSLHRFVTQASVAPTVATYNLLLQAYCDCRRPDVAL 189
Query: 215 TYFRKMV--DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMM 270
+FR ++ DS + P+ Y L L + G LD+A D M+++ + D Y F+M
Sbjct: 190 EHFRLLLKDDSPVLPSPTTYRILARSLAENGKLDQALELKDGMLERGLIAPDTQVYAFIM 249
Query: 271 KALSDGGK-------LDEILEIVGG--ILD 291
+ G +EI E +GG ILD
Sbjct: 250 GGFVNAGDGDKAVSLFEEIKEKLGGESILD 279
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 3/168 (1%)
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
L + I L + L EA L P +T ++ A R D + R
Sbjct: 100 LDLHRRILTLIRENDLDEAALLTRHSIYSNCRPTVFTCNAVLAALLRQARYADLLSLHRF 159
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK---KLKMDDASYKFMMKALSDG 276
+ + + P +A YN L+ D A F +++K + +Y+ + ++L++
Sbjct: 160 VTQASVAPTVATYNLLLQAYCDCRRPDVALEHFRLLLKDDSPVLPSPTTYRILARSLAEN 219
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
GKLD+ LE+ G+L+ G I ++ F+ G G ++ V L E+
Sbjct: 220 GKLDQALELKDGMLERGLIAPDTQVYAFIMGGFVNAGDGDKAVSLFEE 267
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S+ + + N+VL AL ++ + L L R + + +A + ++N++ YC
Sbjct: 128 SNCRPTVFTCNAVLAALLRQARYADLLSLH-RFVTQAS----VAPTVATYNLLLQAYCDC 182
Query: 138 GRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VNPDE 194
R A+E FR + + P ++ L L +NG L +A EL M ++G + PD
Sbjct: 183 RRPDVALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKLDQALELKDGMLERGLIAPDT 242
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDS-GLRPNL--AVYNRLVGKLVQVGMLDEAKSF 251
Y +M D + F ++ + G L VY L+ GM EA
Sbjct: 243 QVYAFIMGGFVNAGDGDKAVSLFEEIKEKLGGESILDGVVYGNLMKGYFLKGMEKEAMDC 302
Query: 252 FDIMV---KKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ ++ K++ SY ++ AL G+LD+ L +
Sbjct: 303 YAEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDALNL 339
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 97/244 (39%), Gaps = 15/244 (6%)
Query: 41 GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF 100
V Y L++ Y + A+E + + ++S V S + +L NGK
Sbjct: 163 ASVAPTVATYNLLLQAYCDCRRPDVALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKL 222
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY---RCSP 157
D+AL+L D M +A + + + G+ G A+ +F ++ E
Sbjct: 223 DQALELKDGMLER----GLIAPDTQVYAFIMGGFVNAGDGDKAVSLFEEIKEKLGGESIL 278
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGAT 215
D + + NL+ GM EA + Y E+ +G V +Y +++DA R+DD
Sbjct: 279 DGVVYGNLMKGYFLKGMEKEAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDALN 338
Query: 216 YFRKMVDSGLRP-----NLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFM 269
F +M P NL +N +V + +A F M KK D SY +
Sbjct: 339 LFDRMCMEHDPPRTITVNLGSFNVMVDAYCRAERFQDAIEVFGKMAEKKCAPDALSYNNL 398
Query: 270 MKAL 273
+ L
Sbjct: 399 IDWL 402
>gi|223947949|gb|ACN28058.1| unknown [Zea mays]
Length = 434
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 177/329 (53%), Positives = 236/329 (71%), Gaps = 3/329 (0%)
Query: 1 MFVKGFVA-DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M +G +A D VY+++M GFV GD D LFEE+KEKLGG + DGVVYG+LMKGYF
Sbjct: 1 MLERGLIAPDTQVYAFIMGGFVNAGDGDKAVSLFEEIKEKLGGESILDGVVYGNLMKGYF 60
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+KGME+EAM+CY E +GE S V+ AV+ N VLDAL NG+ D+AL LFDRM EH+PP+
Sbjct: 61 LKGMEKEAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGRLDDALNLFDRMCMEHDPPR 120
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ VNLGSFNVM D YC RF+DAIEVF KM E +C+PD LS+NNLID L KN ++ EA
Sbjct: 121 TITVNLGSFNVMVDAYCRAERFQDAIEVFGKMAEKKCAPDALSYNNLIDWLGKNKLVGEA 180
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E LY EM ++GVNPDEYTY LL+++CF+V+RV+D YF KM D+GLRPN +N+++
Sbjct: 181 EGLYKEMEERGVNPDEYTYVLLIESCFKVDRVEDAVAYFNKMFDAGLRPNANAFNKVIDG 240
Query: 239 LVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
LV+V L EA+ FFD+M K++K + ASY+ ++KA D +LD+ +++ IL D + F
Sbjct: 241 LVKVDRLSEAQGFFDMMPEKEVKPNIASYELLLKAYIDAARLDDAIKVAKCILLDESVVF 300
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKE 326
S+E + ++ L KEGR ++ KL E E
Sbjct: 301 SDETKALLEEALDKEGRNGQMTKLYEDVE 329
>gi|147791352|emb|CAN75138.1| hypothetical protein VITISV_040755 [Vitis vinifera]
Length = 637
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 212/371 (57%), Positives = 259/371 (69%), Gaps = 50/371 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF ADPVVYSYLMLG VR+ ++DGVF L+EELKEKLG V VV GSLMKGYF++
Sbjct: 227 MLGKGFAADPVVYSYLMLGHVRNLNADGVFELYEELKEKLGDVDDGVVV-GSLMKGYFLR 285
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GME+EAM+CY EAVGE S ++MSAVA NSVLD L N
Sbjct: 286 GMEKEAMQCYAEAVGEGSKIRMSAVAFNSVLDXLSKN----------------------- 322
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKM-----GEYRCSPDTLSFNNLIDQLCKNGML 175
G+F +A+ +F +M R S + SFN ++D C G
Sbjct: 323 -----------------GKFDEAMLLFERMMAEXNPPRRLSXNLGSFNVMVDGFCTAGRF 365
Query: 176 ---AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
EAEELYGEM++KGVNPDE+TY LLMD CF+ NR DD A YFRKMV++GLRPNLAVY
Sbjct: 366 KDAIEAEELYGEMANKGVNPDEFTYVLLMDTCFKENRTDDXAGYFRKMVETGLRPNLAVY 425
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
++LV LV+VG +DEAKSF+D+MVKKLKMD+ SYKF MKAL + GK D++L+++G +LDD
Sbjct: 426 SKLVDGLVKVGKIDEAKSFYDLMVKKLKMDEXSYKFXMKALFEVGKHDDVLKMIGDMLDD 485
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIA 352
EF+ +LQEFVK EL KEGREE+VVKLME KEREKAEA+A+EA A EAAK SA+AA++
Sbjct: 486 DASEFTTDLQEFVKEELRKEGREEDVVKLMEDKEREKAEAQAKEAAATEAAKASAKAAVS 545
Query: 353 SLIPSK-FGDK 362
SL+PSK FG K
Sbjct: 546 SLLPSKLFGSK 556
>gi|125568888|gb|EAZ10403.1| hypothetical protein OsJ_00236 [Oryza sativa Japonica Group]
Length = 378
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/277 (55%), Positives = 210/277 (75%), Gaps = 1/277 (0%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
+VYG+LMKGYF+KGME+EAM+CY E +GE S V+ AV+ N VLDAL NGK D+AL+LF
Sbjct: 1 MVYGNLMKGYFLKGMEKEAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGKLDDALQLF 60
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
DRM EH+PP+R+AVNLGSFNVM D YC RF+DAIEVF KMGE RC+PD LS+NNLID
Sbjct: 61 DRMCEEHDPPRRIAVNLGSFNVMVDAYCRAERFQDAIEVFGKMGEKRCAPDALSYNNLID 120
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
L KN ++ EAE+LY EM ++GVNPDEYTY LL+++ F+V+RVDD +YF KM +GLRP
Sbjct: 121 WLGKNELVGEAEQLYKEMGERGVNPDEYTYVLLIESYFKVDRVDDSVSYFNKMFVAGLRP 180
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIV 286
N +N+++G LV+V LDEA+ FFD M K++K + SY+ +++A D +LD+ +++
Sbjct: 181 NANAFNKVIGGLVKVDRLDEAQGFFDKMPEKEVKPNIGSYELLLRAYIDAARLDDAIKMA 240
Query: 287 GGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
IL D + FS+EL+ ++G L K+GR+ ++ KL E
Sbjct: 241 KCILLDESVVFSDELKALLEGALQKDGRDGDMTKLYE 277
>gi|326524736|dbj|BAK04304.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326533626|dbj|BAK05344.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/337 (47%), Positives = 225/337 (66%), Gaps = 5/337 (1%)
Query: 1 MFVKGFV-ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M GFV DP VYS LM GFV D L++EL++KLGG V DG+VYGSLMK YF
Sbjct: 206 MLASGFVGPDPHVYSLLMAGFVEARDGAKAVELYQELQDKLGGEPVLDGIVYGSLMKAYF 265
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ GMEE+AMECY E +S V+ + N V+DAL N + ++AL LFDRM EH+PP
Sbjct: 266 LMGMEEKAMECYKEVFSPDSEVRFGTESYNEVVDALGQNQRLEDALNLFDRMLREHDPPL 325
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
R+ V++ SF++M D YC GRF+DAI VFR+MGEY+ PD ++NNLI L N ++ EA
Sbjct: 326 RITVDVRSFSMMVDAYCAAGRFEDAIAVFRRMGEYKVVPDVAAYNNLIRHLVLNRLVDEA 385
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E L+ EM ++ + DE T LLM+ACF+ +R+DDG +YF KM + L+P+ + Y+R+V
Sbjct: 386 EVLHKEMCEQILVADEETCVLLMEACFKADRIDDGISYFDKMAELELKPDASAYHRIVDG 445
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG--KLDEILEIVGGILDDGGI 295
LV + +LD+A +FD M +K + A+Y+ ++KA D G +LD+ ++ IL D +
Sbjct: 446 LVGLSLLDKAHEYFDQMREKGIHPSIATYETLLKAYVDVGAARLDDAAKVAKCILLDENV 505
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
FS+E++E ++G L EGRE+++ KL E EREKAEA
Sbjct: 506 VFSDEMRELLEGALRGEGREDDIAKLYEDVEREKAEA 542
>gi|242091205|ref|XP_002441435.1| hypothetical protein SORBIDRAFT_09g026630 [Sorghum bicolor]
gi|241946720|gb|EES19865.1| hypothetical protein SORBIDRAFT_09g026630 [Sorghum bicolor]
Length = 664
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 158/326 (48%), Positives = 221/326 (67%), Gaps = 3/326 (0%)
Query: 1 MFVKGFV-ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M GFV DP VY LM GF+ GD L++ELK+K+GG V DG+VYG+LMK YF
Sbjct: 202 MLDSGFVGPDPKVYRTLMAGFLGAGDGAKAVELYQELKDKVGGEPVLDGIVYGTLMKAYF 261
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ GMEE+AMECY E + S+V+ A + N V+DAL NG+ ++ALKLF RM EH+PP
Sbjct: 262 LMGMEEKAMECYKEVLSVESAVRFGADSYNEVVDALGQNGRLEDALKLFHRMLGEHDPPL 321
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
R+AV+L SF VM D YC GRF+DAI VFR+MGE++ PD S+NNLI L N ++ +
Sbjct: 322 RIAVDLRSFRVMVDAYCAAGRFEDAIAVFRRMGEWKLVPDVASYNNLIRHLQNNQLIDKV 381
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EELY EM + GV DE TY LLM+ACF V+R+DDG +YF KM + L+P+ Y++LV
Sbjct: 382 EELYSEMCESGVGADEETYLLLMEACFSVDRIDDGISYFDKMDELELKPDATAYHKLVDG 441
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
LV M+D+A+ +FD M +K + +SY+ ++KA +LD+ +++ GIL D + F
Sbjct: 442 LVGFSMVDKAQEYFDQMKEKGVSPSISSYETLLKAYIAADRLDDAVKVAKGILLDEKVVF 501
Query: 298 SEELQEFVKGELSKEGREEEVVKLME 323
S+ ++E ++G L +GRE+++VKL E
Sbjct: 502 SDGMRELLEGALRGDGREDDIVKLYE 527
>gi|222632349|gb|EEE64481.1| hypothetical protein OsJ_19331 [Oryza sativa Japonica Group]
Length = 506
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 149/326 (45%), Positives = 210/326 (64%), Gaps = 3/326 (0%)
Query: 1 MFVKGFV-ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M GFV DP VY+ LM GFV GD L+EELKEK+G + DG+VYGSLMK YF
Sbjct: 74 MLASGFVGPDPQVYNLLMAGFVEAGDGAKAVELYEELKEKIGREPILDGIVYGSLMKAYF 133
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ GMEE+AMECY E +G S V+ A + N V+DA N + D+A++LF+RM EH+PP
Sbjct: 134 LMGMEEKAMECYKEVLGAESEVRFGAESYNGVVDAFGRNRRLDDAIELFERMLREHDPPL 193
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++AV++ SF+V+ D YC GRF DAI FR+MGE+ D ++NNLI L G+++EA
Sbjct: 194 KIAVDVRSFSVIVDAYCAAGRFGDAISWFRRMGEWEVVADVAAYNNLIRHLSLQGLVSEA 253
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E LY EM + G+ DE TY LLM CF V+R+D+G YF M + GL+P+ Y+++V
Sbjct: 254 ELLYKEMGESGLKADEETYVLLMQGCFRVDRIDEGINYFDGMAELGLKPDATAYHKIVDG 313
Query: 239 LVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
L+ GMLD A + D M K++ ASY+ ++KA LD+ ++I IL D + F
Sbjct: 314 LIGFGMLDNAHGYLDKMRGKEISPSIASYEALLKAYIGEASLDKSIDIAKDILLDEKVVF 373
Query: 298 SEELQEFVKGELSKEGREEEVVKLME 323
S+E+++ ++G L + GRE ++ KL E
Sbjct: 374 SDEMRDLLEGALREAGREGDITKLYE 399
>gi|413946102|gb|AFW78751.1| hypothetical protein ZEAMMB73_641405 [Zea mays]
Length = 666
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 149/326 (45%), Positives = 214/326 (65%), Gaps = 3/326 (0%)
Query: 1 MFVKGFV-ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M GFV DP VYS LM GFV GD L++ELK+K+GG + DG+VYG+LMK YF
Sbjct: 202 MLTSGFVGPDPKVYSLLMAGFVGAGDGAKALELYQELKDKVGGEPILDGIVYGTLMKAYF 261
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ G E+ MECY E + S+V+ A + N V+DAL NG+ ++ALKLFDRM EH+PP
Sbjct: 262 LMGTGEKVMECYKEVLCVESAVRFGAESYNEVVDALGQNGRLEDALKLFDRMLEEHDPPL 321
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
R+AV+L SF VM D YC GRF+DA+ VFR+MGE++ PD S+NNLI L N ++ +A
Sbjct: 322 RIAVDLRSFRVMVDTYCAAGRFEDAVAVFRRMGEWKLVPDVASYNNLIRHLQINQLIDKA 381
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E LY EM + GV D+ TY LL +ACF V+R+DDG +YF KM + L+P+ Y++L+
Sbjct: 382 EVLYNEMCESGVGADKETYLLLTEACFSVDRIDDGISYFDKMDELELKPDATAYHKLIDG 441
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
LV M+D+A+ +F+ M +K + +SY+ ++KA +LD+ + + GIL + + F
Sbjct: 442 LVGFSMVDKAQEYFNQMKEKGVNPSISSYETLLKAYIAADRLDDAVNVAKGILLNEKVLF 501
Query: 298 SEELQEFVKGELSKEGREEEVVKLME 323
S ++E ++G L +GR ++ KL E
Sbjct: 502 SYGMRELLEGALRGDGRGNDIAKLYE 527
>gi|357128684|ref|XP_003566000.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Brachypodium distachyon]
Length = 683
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 147/326 (45%), Positives = 215/326 (65%), Gaps = 3/326 (0%)
Query: 1 MFVKGFV-ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M GFV DP VY+ LM GFV+ GD L++EL+ K+G ++ DG+VYGSLMK YF
Sbjct: 204 MLASGFVGPDPQVYNLLMAGFVQAGDGAKAVELYQELEHKVGDEMILDGIVYGSLMKAYF 263
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ GMEE+AMECY E +G S V+ + N V+DAL NG+ ++AL+LFDRM EHNPP
Sbjct: 264 LMGMEEKAMECYKEVIGAESEVRFGTESYNEVVDALGQNGRLEDALELFDRMLGEHNPPL 323
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
R+ VN+ SF+VM D Y GRF+DAI VFR+MGE++ PD ++NNLI L N ++ EA
Sbjct: 324 RIVVNVRSFSVMVDAYSAAGRFEDAIAVFRRMGEWKVVPDVAAYNNLIRHLGLNRLVDEA 383
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E L+ EM + + DE TY LLM+ACF +R + G +YF KMV+ L+P+ + Y+ LV
Sbjct: 384 EVLHKEMGEHSLVADEETYVLLMEACFRADRTNVGISYFDKMVELELKPDASAYHELVDG 443
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
LV + MLD+A+ +FD M + + ++Y+ ++KA +LD+ ++ IL D + F
Sbjct: 444 LVGLNMLDKAQEYFDQMRENGIDPTISTYETLLKAYVGMMQLDDAAKVAKCILLDEKVIF 503
Query: 298 SEELQEFVKGELSKEGREEEVVKLME 323
+E++E ++ L +EGR++++ KL E
Sbjct: 504 RDEMRELLESALRREGRDDDIAKLYE 529
>gi|226496595|ref|NP_001146253.1| uncharacterized protein LOC100279827 [Zea mays]
gi|219886401|gb|ACL53575.1| unknown [Zea mays]
Length = 666
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 213/326 (65%), Gaps = 3/326 (0%)
Query: 1 MFVKGFV-ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M GFV DP VYS LM GFV GD L++ELK+K+GG + DG+VYG+LMK YF
Sbjct: 202 MLTSGFVGPDPKVYSLLMAGFVGAGDGAKALELYQELKDKVGGEPILDGIVYGTLMKAYF 261
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ G E+ MECY E + S+V+ A + N V+DAL NG+ ++ALKLFDRM EH+ P
Sbjct: 262 LMGTGEKVMECYKEVLCVESAVRFGAESYNEVVDALGQNGRLEDALKLFDRMLEEHDTPL 321
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
R+AV+L SF VM D YC GRF+DA+ VFR+MGE++ PD S+NNLI L N ++ +A
Sbjct: 322 RIAVDLRSFRVMVDTYCAAGRFEDAVAVFRRMGEWKLVPDVASYNNLIRHLQINQLIDKA 381
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E LY EM + GV D+ TY LL +ACF V+R+DDG +YF KM + L+P+ Y++L+
Sbjct: 382 EVLYNEMCESGVGADKETYLLLTEACFSVDRIDDGISYFDKMDELELKPDATAYHKLIDG 441
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
LV M+D+A+ +F+ M +K + +SY+ ++KA +LD+ + + GIL + + F
Sbjct: 442 LVGFSMVDKAQEYFNQMKEKGVNPSISSYETLLKAYIAADRLDDAVNVAKGILLNEKVLF 501
Query: 298 SEELQEFVKGELSKEGREEEVVKLME 323
S ++E ++G L +GR ++ KL E
Sbjct: 502 SYGMRELLEGALRGDGRGNDIAKLYE 527
>gi|223950361|gb|ACN29264.1| unknown [Zea mays]
Length = 465
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/326 (45%), Positives = 214/326 (65%), Gaps = 3/326 (0%)
Query: 1 MFVKGFVA-DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYF 58
M GFV DP VYS LM GFV GD L++ELK+K+GG + DG+VYG+LMK YF
Sbjct: 1 MLTSGFVGPDPKVYSLLMAGFVGAGDGAKALELYQELKDKVGGEPILDGIVYGTLMKAYF 60
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ G E+ MECY E + S+V+ A + N V+DAL NG+ ++ALKLFDRM EH+PP
Sbjct: 61 LMGTGEKVMECYKEVLCVESAVRFGAESYNEVVDALGQNGRLEDALKLFDRMLEEHDPPL 120
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
R+AV+L SF VM D YC GRF+DA+ VFR+MGE++ PD S+NNLI L N ++ +A
Sbjct: 121 RIAVDLRSFRVMVDTYCAAGRFEDAVAVFRRMGEWKLVPDVASYNNLIRHLQINQLIDKA 180
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E LY EM + GV D+ TY LL +ACF V+R+DDG +YF KM + L+P+ Y++L+
Sbjct: 181 EVLYNEMCESGVGADKETYLLLTEACFSVDRIDDGISYFDKMDELELKPDATAYHKLIDG 240
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
LV M+D+A+ +F+ M +K + +SY+ ++KA +LD+ + + GIL + + F
Sbjct: 241 LVGFSMVDKAQEYFNQMKEKGVNPSISSYETLLKAYIAADRLDDAVNVAKGILLNEKVLF 300
Query: 298 SEELQEFVKGELSKEGREEEVVKLME 323
S ++E ++G L +GR ++ KL E
Sbjct: 301 SYGMRELLEGALRGDGRGNDIAKLYE 326
>gi|297604808|ref|NP_001056146.2| Os05g0534000 [Oryza sativa Japonica Group]
gi|255676520|dbj|BAF18060.2| Os05g0534000, partial [Oryza sativa Japonica Group]
Length = 363
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/256 (42%), Positives = 162/256 (63%), Gaps = 1/256 (0%)
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
CY E +G S V+ A + N V+DA N + D+A++LF+RM EH+PP ++AV++ SF+
Sbjct: 1 CYKEVLGAESEVRFGAESYNGVVDAFGRNRRLDDAIELFERMLREHDPPLKIAVDVRSFS 60
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
V+ D YC GRF DAI FR+MGE+ D ++NNLI L G+++EAE LY EM +
Sbjct: 61 VIVDAYCAAGRFGDAISWFRRMGEWEVVADVAAYNNLIRHLSLQGLVSEAELLYKEMGES 120
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ DE TY LLM CF V+R+D+G YF M + GL+P+ Y+++V L+ GMLD A
Sbjct: 121 GLKADEETYVLLMQGCFRVDRIDEGINYFDGMAELGLKPDATAYHKIVDGLIGFGMLDNA 180
Query: 249 KSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+ D M K++ ASY+ ++KA LD+ ++I IL D + FS+E+++ ++G
Sbjct: 181 HGYLDKMRGKEISPSIASYEALLKAYIGEASLDKSIDIAKDILLDEKVVFSDEMRDLLEG 240
Query: 308 ELSKEGREEEVVKLME 323
L + GRE ++ KL E
Sbjct: 241 ALREAGREGDITKLYE 256
>gi|242036531|ref|XP_002465660.1| hypothetical protein SORBIDRAFT_01g043290 [Sorghum bicolor]
gi|241919514|gb|EER92658.1| hypothetical protein SORBIDRAFT_01g043290 [Sorghum bicolor]
Length = 927
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 214/383 (55%), Gaps = 25/383 (6%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
AD +VY+ L+ G++ GD D F LF EL E+ +V DGVV+ + M+GY+ +G ++EAM
Sbjct: 238 ADSLVYNNLIAGYIDLGDWDKAFELFNELAERC--LVYDGVVHTTFMEGYWKQGKDKEAM 295
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ Y + + KM+ N +L+ L +GK EA +L++ M + H+PP + +N S+
Sbjct: 296 DNYQSLL--DRGFKMTPATCNVLLETLFKHGKHKEANELWETMIDNHSPPSFIGINAESY 353
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
NVM + +G+FK+AIEVF + D FNN+I +LC+NGMLAEAE+L+ EM
Sbjct: 354 NVMVNQCFREGKFKEAIEVFHRQPRKNVQMDVGCFNNIIGKLCENGMLAEAEKLFEEMET 413
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD---SGLRPNLAVYNRLVGKLVQVGM 244
K V PD YTY L+D+CF+ RV+D YF KM D G + N+ +NR+ L + G
Sbjct: 414 KSVLPDVYTYTYLVDSCFKEGRVEDTMQYFYKMADGREHGPKFNIGFFNRMFEGLTEAGQ 473
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI---EFSEE 300
+D+A + M K++K + +++ ++KAL G LD+ ++V + +G + EF E
Sbjct: 474 IDDALKVYGRMPDKEIKPNTITFEILVKALCKEGNLDQARDLVMDMARNGIVPPPEFRES 533
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKERE----------KAEAKAREAEAAEAAKRSARAA 350
+ +F K K R+EE+ K E+K + E ++R A A AK+ ++
Sbjct: 534 VVDFFK----KADRQEEIEKAFEEKPMPTPQPRTEYQLRNEYRSRNAVGAGQAKQPGFSS 589
Query: 351 IASLIPSKFGDKVGGTEMADNAN 373
++ P + + ++N N
Sbjct: 590 TPAVEPGFVYSQPRQSTFSNNQN 612
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S++ + V+ N+++ A C + D A++++ M + + ++ + G
Sbjct: 163 SNIVPNIVSYNTLILAHCEACRVDTAMQVYHDMLAS----APFSPSAVTYRHLTKGLVAA 218
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
GR +DA+++ R+M D+L +NNLI G +A EL+ E++++ + D +
Sbjct: 219 GRIRDALDLLREMLSRNAGADSLVYNNLIAGYIDLGDWDKAFELFNELAERCLVYDGVVH 278
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
M+ ++ + + ++ ++D G + A N L+ L + G EA ++ M+
Sbjct: 279 TTFMEGYWKQGKDKEAMDNYQSLLDRGFKMTPATCNVLLETLFKHGKHKEANELWETMID 338
Query: 258 K------LKMDDASYKFMMKALSDGGKLDEILEI 285
+ ++ SY M+ GK E +E+
Sbjct: 339 NHSPPSFIGINAESYNVMVNQCFREGKFKEAIEV 372
>gi|326507840|dbj|BAJ86663.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 931
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/330 (39%), Positives = 190/330 (57%), Gaps = 11/330 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M+ +G AD +VY L+ G++ D D LF EL EK V DGVV+ S M+GY+ K
Sbjct: 232 MYHRGQGADSIVYKNLIDGYIGLDDWDKASELFAELTEK--ATVYDGVVHTSFMEGYWKK 289
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM++EAM+ Y + N KM+ N +L+ L + K EA L++ M + H+PP +
Sbjct: 290 GMDKEAMDNYKSLLDRN--FKMTPATCNVLLETLFKHDKHKEASDLWETMIDNHSPPSFI 347
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N S+NVM + +GRF+DAIEVF + D FNN+I +LC+ GMLAEAE+
Sbjct: 348 GMNSESYNVMVNQCFKEGRFQDAIEVFHRQPRRNVQMDVGCFNNIIGKLCEKGMLAEAEK 407
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD---SGLRPNLAVYNRLVG 237
L+ EM K V PD YTY L+D CF+ RVDD YF KM D G + N+ +NR+
Sbjct: 408 LFEEMESKSVLPDVYTYTFLVDLCFKEGRVDDTMQYFYKMADGREHGPKFNIGFFNRMFE 467
Query: 238 KLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
L Q G +D+A + M K++K + +++ ++ AL G+LD L++V + GG+
Sbjct: 468 GLSQGGRIDDALKVYGRMADKEIKPNTTTFEILVNALCKEGELDRALDLVRDMA-RGGVV 526
Query: 297 FSEELQEFVKGELSKEG-REEEVVKLMEKK 325
+ E +E V GE+ K R EE+ K E+K
Sbjct: 527 ATPEFRESV-GEIFKNADRHEEIEKAFEEK 555
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 127/306 (41%), Gaps = 51/306 (16%)
Query: 22 RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVK 81
R G D LF+ + +V + V Y +L+ + G +EA+ Y E + +S
Sbjct: 145 RAGRHDDAVALFDSFFRR-SSIVPNVVSYNTLILAHCEAGRVDEALRAYQEMLDGATSFP 203
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
SAV+ + L G+ +AL+L M + + + + + DGY G +
Sbjct: 204 PSAVSYRHLTKGLVAAGRIQDALELLHSMYH-----RGQGADSIVYKNLIDGYIGLDDWD 258
Query: 142 DAIEVFRKMGE-------------------------------------YRCSPDTLSFNN 164
A E+F ++ E ++ +P T N
Sbjct: 259 KASELFAELTEKATVYDGVVHTSFMEGYWKKGMDKEAMDNYKSLLDRNFKMTPATC--NV 316
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNP-----DEYTYGLLMDACFEVNRVDDGATYFRK 219
L++ L K+ EA +L+ M D P + +Y ++++ CF+ R D F +
Sbjct: 317 LLETLFKHDKHKEASDLWETMIDNHSPPSFIGMNSESYNVMVNQCFKEGRFQDAIEVFHR 376
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGK 278
++ ++ +N ++GKL + GML EA+ F+ M K + D +Y F++ G+
Sbjct: 377 QPRRNVQMDVGCFNNIIGKLCEKGMLAEAEKLFEEMESKSVLPDVYTYTFLVDLCFKEGR 436
Query: 279 LDEILE 284
+D+ ++
Sbjct: 437 VDDTMQ 442
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 114/265 (43%), Gaps = 17/265 (6%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
NS V+ + N+V ++ G+ D+A+ LFD + N+ S+N + +C
Sbjct: 126 NSRVRPTVFTCNAVAASMGRAGRHDDAVALFDSFFRR----SSIVPNVVSYNTLILAHCE 181
Query: 137 QGRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
GR +A+ +++M G P +S+ +L L G + +A EL M +G D
Sbjct: 182 AGRVDEALRAYQEMLDGATSFPPSAVSYRHLTKGLVAAGRIQDALELLHSMYHRGQGADS 241
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM----LDEAKS 250
Y L+D ++ D + F ++ + + V+ + + GM +D KS
Sbjct: 242 IVYKNLIDGYIGLDDWDKASELFAELTEKATVYDGVVHTSFMEGYWKKGMDKEAMDNYKS 301
Query: 251 FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG----IEFSEELQEFVK 306
D + KM A+ +++ L K E ++ ++D+ I + E +
Sbjct: 302 LLD---RNFKMTPATCNVLLETLFKHDKHKEASDLWETMIDNHSPPSFIGMNSESYNVMV 358
Query: 307 GELSKEGREEEVVKLMEKKEREKAE 331
+ KEGR ++ +++ ++ R +
Sbjct: 359 NQCFKEGRFQDAIEVFHRQPRRNVQ 383
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA----T 215
LS +N + L ++G L A + V P +T + + R DD +
Sbjct: 99 LSLHNRVQSLIRSGDLDGASAAARAAVNSRVRPTVFTCNAVAASMGRAGRHDDAVALFDS 158
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV---KKLKMDDASYKFMMKA 272
+FR+ S + PN+ YN L+ + G +DEA + M+ SY+ + K
Sbjct: 159 FFRR---SSIVPNVVSYNTLILAHCEAGRVDEALRAYQEMLDGATSFPPSAVSYRHLTKG 215
Query: 273 LSDGGKLDEILEIVGGILDDG 293
L G++ + LE++ + G
Sbjct: 216 LVAAGRIQDALELLHSMYHRG 236
>gi|357131255|ref|XP_003567254.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Brachypodium distachyon]
Length = 761
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 120/338 (35%), Positives = 190/338 (56%), Gaps = 9/338 (2%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M+ +G AD +VY L+ G++ + F LF+EL+EK V DGVV+ S M+GY+ K
Sbjct: 231 MYNRGHGADSIVYKNLIDGYIHLDNWGKAFELFDELREK--AAVYDGVVHTSFMEGYWKK 288
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM++EAME Y + + KM+ N +L+ L + K EA L++ M + H PP +
Sbjct: 289 GMDKEAMENYESLL--DRKFKMTPATCNVLLETLFKHDKLKEANDLWETMVDNHTPPSFI 346
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N S+NVM + +G+F +AI+VF + D FNN+I +LC+NG+L+EAE
Sbjct: 347 GINSESYNVMVNQCFKEGKFHEAIKVFHRQPRKNVQIDVGCFNNIIGKLCENGLLSEAEM 406
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD---SGLRPNLAVYNRLVG 237
L+ EM K V PD YTY L+D+CF++ RVDD YF KM D G + N+ +NR+
Sbjct: 407 LFQEMESKSVLPDVYTYTYLVDSCFKICRVDDTMQYFYKMADGREHGPKFNIGFFNRMFE 466
Query: 238 KLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
L + G +D+A + M K++K + +++ ++KAL +LD ++V + GG+
Sbjct: 467 GLTEAGRIDDALKVYGRMPDKEIKPNTTTFEILVKALCKERELDRTRDLVRD-MSRGGVV 525
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKA 334
E +EFV R +E+ K E+K ++ +
Sbjct: 526 APPEFREFVSEIFKNADRHDEIEKAFEEKPEPPSQPRP 563
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 133/291 (45%), Gaps = 27/291 (9%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
V + V Y+ L+L D + +EL + V Y L KG G +EA
Sbjct: 165 VPNVVSYNTLILAHCEADRVDKALQANQELLDGATSFSPSAVTYRHLTKGLVAAGRIQEA 224
Query: 67 ----MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
E YN G +S + +++D + + +A +LFD ++ ++ AV
Sbjct: 225 HQLLHEMYNRGHGADS------IVYKNLIDGYIHLDNWGKAFELFDELR------EKAAV 272
Query: 123 NLGSFNV-MADGYCGQGRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
G + +GY +G K+A+E + + +++ +P T N L++ L K+ L EA
Sbjct: 273 YDGVVHTSFMEGYWKKGMDKEAMENYESLLDRKFKMTPATC--NVLLETLFKHDKLKEAN 330
Query: 180 ELYGEMSDKGVNP-----DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+L+ M D P + +Y ++++ CF+ + + F + ++ ++ +N
Sbjct: 331 DLWETMVDNHTPPSFIGINSESYNVMVNQCFKEGKFHEAIKVFHRQPRKNVQIDVGCFNN 390
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILE 284
++GKL + G+L EA+ F M K + D +Y +++ + ++D+ ++
Sbjct: 391 IIGKLCENGLLSEAEMLFQEMESKSVLPDVYTYTYLVDSCFKICRVDDTMQ 441
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 21/267 (7%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
+S V+ + N+V ++ G++D+A+ LFD N + N+ S+N + +C
Sbjct: 125 SSRVRPTVFTCNAVAASMVRAGRYDDAVSLFDFFFRRSN----IVPNVVSYNTLILAHCE 180
Query: 137 QGRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
R A++ +++ G SP +++ +L L G + EA +L EM ++G D
Sbjct: 181 ADRVDKALQANQELLDGATSFSPSAVTYRHLTKGLVAAGRIQEAHQLLHEMYNRGHGADS 240
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK-----LVQVGMLDEA- 248
Y L+D ++ F + LR AVY+ +V + GM EA
Sbjct: 241 IVYKNLIDGYIHLDNWGKAFELFDE-----LREKAAVYDGVVHTSFMEGYWKKGMDKEAM 295
Query: 249 KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG----IEFSEELQEF 304
+++ ++ +K KM A+ +++ L KL E ++ ++D+ I + E
Sbjct: 296 ENYESLLDRKFKMTPATCNVLLETLFKHDKLKEANDLWETMVDNHTPPSFIGINSESYNV 355
Query: 305 VKGELSKEGREEEVVKLMEKKEREKAE 331
+ + KEG+ E +K+ ++ R+ +
Sbjct: 356 MVNQCFKEGKFHEAIKVFHRQPRKNVQ 382
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 212 DGATYF-RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM--DDASYKF 268
DGAT R V S +RP + N + +V+ G D+A S FD ++ + + SY
Sbjct: 114 DGATVVARAAVSSRVRPTVFTCNAVAASMVRAGRYDDAVSLFDFFFRRSNIVPNVVSYNT 173
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEE---LQEFVKGELSKEGREEEVVKLME 323
++ A + ++D+ L+ +L DG FS + KG L GR +E +L+
Sbjct: 174 LILAHCEADRVDKALQANQELL-DGATSFSPSAVTYRHLTKG-LVAAGRIQEAHQLLH 229
>gi|115463453|ref|NP_001055326.1| Os05g0365500 [Oryza sativa Japonica Group]
gi|46063434|gb|AAS79737.1| putative pentatricopeptide (PPR) repeat-containing protein, PF01535
[Oryza sativa Japonica Group]
gi|54287606|gb|AAV31350.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|54291873|gb|AAV32241.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|113578877|dbj|BAF17240.1| Os05g0365500 [Oryza sativa Japonica Group]
Length = 911
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 189/329 (57%), Gaps = 9/329 (2%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G AD +VY+ L+ G++ + + D F LFEEL+ + +V DGVV+ S M+GY+ K
Sbjct: 246 MLNRGQGADSLVYNNLIAGYIEEDNWDKAFELFEELQGRC--LVYDGVVHTSFMEGYWKK 303
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM++EAME Y + + +M+ N +L+ L + K EA L++ M + H PP +
Sbjct: 304 GMDKEAMENYQSLL--DKKFRMTPATCNVLLETLFKHDKDKEANDLWETMIDNHTPPSFI 361
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N S+NVM + + +F +AIEVF + D FNN+I +LC+NGML EAE+
Sbjct: 362 GINSESYNVMVNQCFKKCKFHEAIEVFHRQPRKNVQMDVGCFNNIIGKLCENGMLEEAEK 421
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD---SGLRPNLAVYNRLVG 237
L+ EM K V PD YTY L+D+CF+V RVDD YF KM D G + N+ +NR+
Sbjct: 422 LFEEMETKSVLPDVYTYTYLVDSCFKVGRVDDTIQYFYKMADGREHGPKFNIGFFNRMFE 481
Query: 238 KLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
L + G +D+A + M K++K + +++ ++ AL G LD+ E+V + GG+
Sbjct: 482 GLTEAGRMDDALKVYGRMPDKEIKPNTTTFETLVNALCKEGDLDKARELVSDMA-KGGVT 540
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEKK 325
E ++ V GR+EE+ K E+K
Sbjct: 541 PPPEFRDSVIDIFKNAGRQEEIEKAFEEK 569
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
S V+ + N+V ++ G+ D+A+ LFD N + N+ S+N + +C
Sbjct: 141 TSRVRPTVFTCNAVAASMVRAGRHDDAVSLFDFFFRRSN----IVPNVVSYNTLILAHCE 196
Query: 137 QGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
R A++V+R+M + SP +++ +L L G + +A +L EM ++G D
Sbjct: 197 AARVDSALQVYREMLDKAPFSPSAVTYRHLTKGLVAAGRIQDALDLLREMLNRGQGADSL 256
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDI 254
Y L+ E + D F ++ L + V+ + + GM EA +++ +
Sbjct: 257 VYNNLIAGYIEEDNWDKAFELFEELQGRCLVYDGVVHTSFMEGYWKKGMDKEAMENYQSL 316
Query: 255 MVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG----IEFSEELQEFVKGELS 310
+ KK +M A+ +++ L K E ++ ++D+ I + E + +
Sbjct: 317 LDKKFRMTPATCNVLLETLFKHDKDKEANDLWETMIDNHTPPSFIGINSESYNVMVNQCF 376
Query: 311 KEGREEEVVKLMEKKEREKAE 331
K+ + E +++ ++ R+ +
Sbjct: 377 KKCKFHEAIEVFHRQPRKNVQ 397
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 110/283 (38%), Gaps = 80/283 (28%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S++ + V+ N+++ A C + D AL+++ M ++ + + ++ + G
Sbjct: 178 SNIVPNVVSYNTLILAHCEAARVDSALQVYREMLDK----APFSPSAVTYRHLTKGLVAA 233
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLI------------------------------- 166
GR +DA+++ R+M D+L +NNLI
Sbjct: 234 GRIQDALDLLREMLNRGQGADSLVYNNLIAGYIEEDNWDKAFELFEELQGRCLVYDGVVH 293
Query: 167 ----DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
+ K GM EA E Y + DK T +L++ F+ ++ + + M+D
Sbjct: 294 TSFMEGYWKKGMDKEAMENYQSLLDKKFRMTPATCNVLLETLFKHDKDKEANDLWETMID 353
Query: 223 SGLRP----------------------------------------NLAVYNRLVGKLVQV 242
+ P ++ +N ++GKL +
Sbjct: 354 NHTPPSFIGINSESYNVMVNQCFKKCKFHEAIEVFHRQPRKNVQMDVGCFNNIIGKLCEN 413
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILE 284
GML+EA+ F+ M K + D +Y +++ + G++D+ ++
Sbjct: 414 GMLEEAEKLFEEMETKSVLPDVYTYTYLVDSCFKVGRVDDTIQ 456
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 9/140 (6%)
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT---- 215
LS +N + L ++G L A V P +T + + R DD +
Sbjct: 114 LSLHNRVQSLIRSGDLDGASVAARAAVTSRVRPTVFTCNAVAASMVRAGRHDDAVSLFDF 173
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA--SYKFMMKAL 273
+FR+ S + PN+ YN L+ + +D A + M+ K + +Y+ + K L
Sbjct: 174 FFRR---SNIVPNVVSYNTLILAHCEAARVDSALQVYREMLDKAPFSPSAVTYRHLTKGL 230
Query: 274 SDGGKLDEILEIVGGILDDG 293
G++ + L+++ +L+ G
Sbjct: 231 VAAGRIQDALDLLREMLNRG 250
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 212 DGATYF-RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM--DDASYKF 268
DGA+ R V S +RP + N + +V+ G D+A S FD ++ + + SY
Sbjct: 130 DGASVAARAAVTSRVRPTVFTCNAVAASMVRAGRHDDAVSLFDFFFRRSNIVPNVVSYNT 189
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
++ A + ++D L++ +LD S + L GR ++ + L+
Sbjct: 190 LILAHCEAARVDSALQVYREMLDKAPFSPSAVTYRHLTKGLVAAGRIQDALDLL 243
>gi|222631311|gb|EEE63443.1| hypothetical protein OsJ_18256 [Oryza sativa Japonica Group]
Length = 937
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 189/329 (57%), Gaps = 9/329 (2%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G AD +VY+ L+ G++ + + D F LFEEL+ + +V DGVV+ S M+GY+ K
Sbjct: 246 MLNRGQGADSLVYNNLIAGYIEEDNWDKAFELFEELQGRC--LVYDGVVHTSFMEGYWKK 303
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM++EAME Y + + +M+ N +L+ L + K EA L++ M + H PP +
Sbjct: 304 GMDKEAMENYQSLL--DKKFRMTPATCNVLLETLFKHDKDKEANDLWETMIDNHTPPSFI 361
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N S+NVM + + +F +AIEVF + D FNN+I +LC+NGML EAE+
Sbjct: 362 GINSESYNVMVNQCFKKCKFHEAIEVFHRQPRKNVQMDVGCFNNIIGKLCENGMLEEAEK 421
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD---SGLRPNLAVYNRLVG 237
L+ EM K V PD YTY L+D+CF+V RVDD YF KM D G + N+ +NR+
Sbjct: 422 LFEEMETKSVLPDVYTYTYLVDSCFKVGRVDDTIQYFYKMADGREHGPKFNIGFFNRMFE 481
Query: 238 KLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
L + G +D+A + M K++K + +++ ++ AL G LD+ E+V + GG+
Sbjct: 482 GLTEAGRMDDALKVYGRMPDKEIKPNTTTFETLVNALCKEGDLDKARELVSD-MAKGGVT 540
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEKK 325
E ++ V GR+EE+ K E+K
Sbjct: 541 PPPEFRDSVIDIFKNAGRQEEIEKAFEEK 569
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
S V+ + N+V ++ G+ D+A+ LFD N + N+ S+N + +C
Sbjct: 141 TSRVRPTVFTCNAVAASMVRAGRHDDAVSLFDFFFRRSN----IVPNVVSYNTLILAHCE 196
Query: 137 QGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
R A++V+R+M + SP +++ +L L G + +A +L EM ++G D
Sbjct: 197 AARVDSALQVYREMLDKAPFSPSAVTYRHLTKGLVAAGRIQDALDLLREMLNRGQGADSL 256
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDI 254
Y L+ E + D F ++ L + V+ + + GM EA +++ +
Sbjct: 257 VYNNLIAGYIEEDNWDKAFELFEELQGRCLVYDGVVHTSFMEGYWKKGMDKEAMENYQSL 316
Query: 255 MVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG----IEFSEELQEFVKGELS 310
+ KK +M A+ +++ L K E ++ ++D+ I + E + +
Sbjct: 317 LDKKFRMTPATCNVLLETLFKHDKDKEANDLWETMIDNHTPPSFIGINSESYNVMVNQCF 376
Query: 311 KEGREEEVVKLMEKKEREKAE 331
K+ + E +++ ++ R+ +
Sbjct: 377 KKCKFHEAIEVFHRQPRKNVQ 397
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 110/283 (38%), Gaps = 80/283 (28%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S++ + V+ N+++ A C + D AL+++ M ++ + + ++ + G
Sbjct: 178 SNIVPNVVSYNTLILAHCEAARVDSALQVYREMLDK----APFSPSAVTYRHLTKGLVAA 233
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLI------------------------------- 166
GR +DA+++ R+M D+L +NNLI
Sbjct: 234 GRIQDALDLLREMLNRGQGADSLVYNNLIAGYIEEDNWDKAFELFEELQGRCLVYDGVVH 293
Query: 167 ----DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
+ K GM EA E Y + DK T +L++ F+ ++ + + M+D
Sbjct: 294 TSFMEGYWKKGMDKEAMENYQSLLDKKFRMTPATCNVLLETLFKHDKDKEANDLWETMID 353
Query: 223 SGLRP----------------------------------------NLAVYNRLVGKLVQV 242
+ P ++ +N ++GKL +
Sbjct: 354 NHTPPSFIGINSESYNVMVNQCFKKCKFHEAIEVFHRQPRKNVQMDVGCFNNIIGKLCEN 413
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILE 284
GML+EA+ F+ M K + D +Y +++ + G++D+ ++
Sbjct: 414 GMLEEAEKLFEEMETKSVLPDVYTYTYLVDSCFKVGRVDDTIQ 456
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 9/140 (6%)
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT---- 215
LS +N + L ++G L A G V P +T + + R DD +
Sbjct: 114 LSLHNRVQSLIRSGDLDGASVAAGAAVTSRVRPTVFTCNAVAASMVRAGRHDDAVSLFDF 173
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA--SYKFMMKAL 273
+FR+ S + PN+ YN L+ + +D A + M+ K + +Y+ + K L
Sbjct: 174 FFRR---SNIVPNVVSYNTLILAHCEAARVDSALQVYREMLDKAPFSPSAVTYRHLTKGL 230
Query: 274 SDGGKLDEILEIVGGILDDG 293
G++ + L+++ +L+ G
Sbjct: 231 VAAGRIQDALDLLREMLNRG 250
>gi|414871330|tpg|DAA49887.1| TPA: hypothetical protein ZEAMMB73_769486 [Zea mays]
Length = 775
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 194/352 (55%), Gaps = 19/352 (5%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
AD +VY+ L+ G++ D D F LF EL E+ +V DGVV+ + M+GY+ +G ++EAM
Sbjct: 200 ADSLVYNNLIAGYIDLNDWDRAFELFNELAERC--LVYDGVVHTTFMEGYWRQGKDKEAM 257
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ Y + + KM+ N +L+ L +GK EA L++ M + H PP + +N S+
Sbjct: 258 DNYQSLL--DRGFKMTPATCNVLLETLFKHGKHKEANDLWETMIDNHTPPSFIGINAESY 315
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
NVM + +G+F++AIEVF + D FNN+I +LC+NGMLAEA++L+ EM
Sbjct: 316 NVMVNQCFREGKFQEAIEVFHRQPRKNVQMDVGCFNNIIGKLCENGMLAEAKKLFEEMEK 375
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD---SGLRPNLAVYNRLVGKLVQVGM 244
K V PD YTY L+D+CF+ V+D YF KM D G + N+ +NR+ L + G
Sbjct: 376 KSVLPDVYTYTYLVDSCFKEGYVEDTLEYFYKMADEKPHGPKFNIGFFNRMFEGLTEAGR 435
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIV-----GGILDDGGIEFS 298
+D+A + M K++K + +++ ++KAL LD+ +V GGI+ G F
Sbjct: 436 IDDALKVYGRMPDKEIKPNMTTFEILVKALCKEEDLDQARGLVMDMARGGIVPPQG--FR 493
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAA 350
E + F K + GR+EE+ K E+K + + E R+A A
Sbjct: 494 ESVVNFFK----EAGRQEEIEKAFEEKPMPTPQPRTEYQPRTEYHSRNADGA 541
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 10/214 (4%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S++ + V+ N+++ A C + D AL+++ M + + +F + G
Sbjct: 125 SNIVPNIVSYNTLILAHCEADRVDTALQVYQDMLAS----APFSPSAVTFRHLTKGLVAA 180
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
GR DA+++ R+M D+L +NNLI A EL+ E++++ + D +
Sbjct: 181 GRIGDALDLLREMLSRSAGADSLVYNNLIAGYIDLNDWDRAFELFNELAERCLVYDGVVH 240
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
M+ + + + ++ ++D G + A N L+ L + G EA ++ M+
Sbjct: 241 TTFMEGYWRQGKDKEAMDNYQSLLDRGFKMTPATCNVLLETLFKHGKHKEANDLWETMID 300
Query: 258 K------LKMDDASYKFMMKALSDGGKLDEILEI 285
+ ++ SY M+ GK E +E+
Sbjct: 301 NHTPPSFIGINAESYNVMVNQCFREGKFQEAIEV 334
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 104/242 (42%), Gaps = 20/242 (8%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDT 159
D+A+ LFD N + N+ S+N + +C R A++V++ M SP
Sbjct: 112 DDAVALFDFFFRRSN----IVPNIVSYNTLILAHCEADRVDTALQVYQDMLASAPFSPSA 167
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
++F +L L G + +A +L EM + D Y L+ ++N D F +
Sbjct: 168 VTFRHLTKGLVAAGRIGDALDLLREMLSRSAGADSLVYNNLIAGYIDLNDWDRAFELFNE 227
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAK------SFFDIMVKKLKMDDASYKFMMKAL 273
+ + L VY+ +V G + K ++ ++ + KM A+ +++ L
Sbjct: 228 LAERCL-----VYDGVVHTTFMEGYWRQGKDKEAMDNYQSLLDRGFKMTPATCNVLLETL 282
Query: 274 SDGGKLDEILEIVGGILDDGG----IEFSEELQEFVKGELSKEGREEEVVKLMEKKEREK 329
GK E ++ ++D+ I + E + + +EG+ +E +++ ++ R+
Sbjct: 283 FKHGKHKEANDLWETMIDNHTPPSFIGINAESYNVMVNQCFREGKFQEAIEVFHRQPRKN 342
Query: 330 AE 331
+
Sbjct: 343 VQ 344
>gi|212275818|ref|NP_001130642.1| uncharacterized protein LOC100191742 [Zea mays]
gi|194689720|gb|ACF78944.1| unknown [Zea mays]
gi|414871331|tpg|DAA49888.1| TPA: hypothetical protein ZEAMMB73_769486 [Zea mays]
Length = 813
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 194/352 (55%), Gaps = 19/352 (5%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
AD +VY+ L+ G++ D D F LF EL E+ +V DGVV+ + M+GY+ +G ++EAM
Sbjct: 238 ADSLVYNNLIAGYIDLNDWDRAFELFNELAERC--LVYDGVVHTTFMEGYWRQGKDKEAM 295
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ Y + + KM+ N +L+ L +GK EA L++ M + H PP + +N S+
Sbjct: 296 DNYQSLL--DRGFKMTPATCNVLLETLFKHGKHKEANDLWETMIDNHTPPSFIGINAESY 353
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
NVM + +G+F++AIEVF + D FNN+I +LC+NGMLAEA++L+ EM
Sbjct: 354 NVMVNQCFREGKFQEAIEVFHRQPRKNVQMDVGCFNNIIGKLCENGMLAEAKKLFEEMEK 413
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD---SGLRPNLAVYNRLVGKLVQVGM 244
K V PD YTY L+D+CF+ V+D YF KM D G + N+ +NR+ L + G
Sbjct: 414 KSVLPDVYTYTYLVDSCFKEGYVEDTLEYFYKMADEKPHGPKFNIGFFNRMFEGLTEAGR 473
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIV-----GGILDDGGIEFS 298
+D+A + M K++K + +++ ++KAL LD+ +V GGI+ G F
Sbjct: 474 IDDALKVYGRMPDKEIKPNMTTFEILVKALCKEEDLDQARGLVMDMARGGIVPPQG--FR 531
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAA 350
E + F K + GR+EE+ K E+K + + E R+A A
Sbjct: 532 ESVVNFFK----EAGRQEEIEKAFEEKPMPTPQPRTEYQPRTEYHSRNADGA 579
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 10/214 (4%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S++ + V+ N+++ A C + D AL+++ M + + +F + G
Sbjct: 163 SNIVPNIVSYNTLILAHCEADRVDTALQVYQDMLAS----APFSPSAVTFRHLTKGLVAA 218
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
GR DA+++ R+M D+L +NNLI A EL+ E++++ + D +
Sbjct: 219 GRIGDALDLLREMLSRSAGADSLVYNNLIAGYIDLNDWDRAFELFNELAERCLVYDGVVH 278
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
M+ + + + ++ ++D G + A N L+ L + G EA ++ M+
Sbjct: 279 TTFMEGYWRQGKDKEAMDNYQSLLDRGFKMTPATCNVLLETLFKHGKHKEANDLWETMID 338
Query: 258 K------LKMDDASYKFMMKALSDGGKLDEILEI 285
+ ++ SY M+ GK E +E+
Sbjct: 339 NHTPPSFIGINAESYNVMVNQCFREGKFQEAIEV 372
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 104/242 (42%), Gaps = 20/242 (8%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDT 159
D+A+ LFD N + N+ S+N + +C R A++V++ M SP
Sbjct: 150 DDAVALFDFFFRRSN----IVPNIVSYNTLILAHCEADRVDTALQVYQDMLASAPFSPSA 205
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
++F +L L G + +A +L EM + D Y L+ ++N D F +
Sbjct: 206 VTFRHLTKGLVAAGRIGDALDLLREMLSRSAGADSLVYNNLIAGYIDLNDWDRAFELFNE 265
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAK------SFFDIMVKKLKMDDASYKFMMKAL 273
+ + L VY+ +V G + K ++ ++ + KM A+ +++ L
Sbjct: 266 LAERCL-----VYDGVVHTTFMEGYWRQGKDKEAMDNYQSLLDRGFKMTPATCNVLLETL 320
Query: 274 SDGGKLDEILEIVGGILDDGG----IEFSEELQEFVKGELSKEGREEEVVKLMEKKEREK 329
GK E ++ ++D+ I + E + + +EG+ +E +++ ++ R+
Sbjct: 321 FKHGKHKEANDLWETMIDNHTPPSFIGINAESYNVMVNQCFREGKFQEAIEVFHRQPRKN 380
Query: 330 AE 331
+
Sbjct: 381 VQ 382
>gi|224033807|gb|ACN35979.1| unknown [Zea mays]
Length = 813
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 194/352 (55%), Gaps = 19/352 (5%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
AD +VY+ L+ G++ D D F LF EL E+ +V DGVV+ + M+GY+ +G ++EAM
Sbjct: 238 ADSLVYNNLIAGYIDLNDWDRAFELFNELAERC--LVYDGVVHTTFMEGYWRQGKDKEAM 295
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ Y + + KM+ N +L+ L +GK EA L++ M + H PP + +N S+
Sbjct: 296 DNYQSLL--DRGFKMTPATCNVLLETLFKHGKHKEANDLWETMIDNHTPPSFIGINAESY 353
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
NVM + +G+F++AIEVF + D FNN+I +LC+NGMLAEA++L+ EM
Sbjct: 354 NVMVNQCFREGKFQEAIEVFHRQPRKNVQMDVGCFNNIIGKLCENGMLAEAKKLFEEMEK 413
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD---SGLRPNLAVYNRLVGKLVQVGM 244
K V PD YTY L+D+CF+ V+D YF KM D G + N+ +NR+ L + G
Sbjct: 414 KSVLPDVYTYTYLVDSCFKEGYVEDTLEYFYKMADEKPHGPKFNIGFFNRMFEGLTEAGR 473
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIV-----GGILDDGGIEFS 298
+D+A + M K++K + +++ ++KAL LD+ +V GGI+ G F
Sbjct: 474 IDDALKVYGRMPDKEIKPNMTTFEILVKALCKEEDLDQARGLVMDMARGGIVPPQG--FR 531
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAA 350
E + F K + GR+EE+ K E+K + + E R+A A
Sbjct: 532 ESVVNFFK----EAGRQEEIEKAFEEKPMPTPQPRTEYQPRTEYHSRNADGA 579
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 10/214 (4%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S++ + V+ N+++ A C + D AL+++ M + + +F + G
Sbjct: 163 SNIVPNIVSYNTLILAHCEADRVDTALQVYQDMLAS----APFSPSAVTFRHLTKGLVAA 218
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
GR DA+++ R+M D+L +NNLI A EL+ E++++ + D +
Sbjct: 219 GRIGDALDLLREMLSRSAGADSLVYNNLIAGYIDLNDWDRAFELFNELAERCLVYDGVVH 278
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
M+ + + + ++ ++D G + A N L+ L + G EA ++ M+
Sbjct: 279 TTFMEGYWRQGKDKEAMDNYQSLLDRGFKMTPATCNVLLETLFKHGKHKEANDLWETMID 338
Query: 258 K------LKMDDASYKFMMKALSDGGKLDEILEI 285
+ ++ SY M+ GK E +E+
Sbjct: 339 NHTPPSFIGINAESYNVMVNQCFREGKFQEAIEV 372
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 104/242 (42%), Gaps = 20/242 (8%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDT 159
D+A+ LFD N + N+ S+N + +C R A++V++ M SP
Sbjct: 150 DDAVALFDFFFRRSN----IVPNIVSYNTLILAHCEADRVDTALQVYQDMLASAPFSPSA 205
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
++F +L L G + +A +L EM + D Y L+ ++N D F +
Sbjct: 206 VTFRHLTKGLVAAGRIGDALDLLREMLSRSAGADSLVYNNLIAGYIDLNDWDRAFELFNE 265
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAK------SFFDIMVKKLKMDDASYKFMMKAL 273
+ + L VY+ +V G + K ++ ++ + KM A+ +++ L
Sbjct: 266 LAERCL-----VYDGVVHTTFMEGYWRQGKDKEAMDNYQSLLDRGFKMTPATCNVLLETL 320
Query: 274 SDGGKLDEILEIVGGILDDGG----IEFSEELQEFVKGELSKEGREEEVVKLMEKKEREK 329
GK E ++ ++D+ I + E + + +EG+ +E +++ ++ R+
Sbjct: 321 FKHGKHKEANDLWETMIDNHTPPSFIGINAESYNVMVNQCFREGKFQEAIEVFHRQPRKN 380
Query: 330 AE 331
+
Sbjct: 381 VQ 382
>gi|225465247|ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Vitis vinifera]
Length = 627
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 185/328 (56%), Gaps = 10/328 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD +VY+ L+ GF+ + LF+ELKE+ +V DGVV G+ M YF K
Sbjct: 233 MLNKGHGADSLVYNNLISGFLNLENEAKAIELFDELKERC--LVYDGVVNGTFMDWYFTK 290
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+ AM+ Y + + +M+ V N++L+ L + K EA LFD+M + H PP
Sbjct: 291 GREKCAMDSYKSLL--DRQFRMTPVTCNALLEVLLKHDKKAEAWALFDQMLDNHTPPNFQ 348
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-P---DTLSFNNLIDQLCKNGMLA 176
AVN SF+VM + G+F +AIEVF+K+G+ + S P D +NN+I + C+NG+L+
Sbjct: 349 AVNSDSFSVMVNECVKLGKFTEAIEVFKKVGKKQGSKPFAMDVAGYNNIIARFCENGLLS 408
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EAE+L+GE+S K + PD Y ++A F + R DD F + VDSGLR ++ N++
Sbjct: 409 EAEQLFGELSTKSLTPDVNIYRTFIEAYFGMERADDALQMFNRFVDSGLRVIVSFANKVF 468
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+LV G E M +K K D +Y+ ++K L D +++G ++ I
Sbjct: 469 DELVNKGKAGECVPVLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMV-RYNI 527
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLME 323
+ L+EFV KEGR EE+ +L+E
Sbjct: 528 GVTPSLREFVVEAFGKEGRSEEIERLLE 555
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 100/250 (40%), Gaps = 46/250 (18%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S+ + + N+++ A+ N +FD+A+ LF N+ N + N+ S+NV+ + +C
Sbjct: 129 SNTRPTVFTCNAIIAAMYRNKRFDDAIALFQFFFNQSN----IVPNIVSYNVLINTHCDA 184
Query: 138 GRFKDAIEVFRKM---GEYRCSP---------------------------------DTLS 161
GR ++++R + + SP D+L
Sbjct: 185 GRVDVGLDIYRHILANAPFSPSPVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLV 244
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+NNLI A+A EL+ E+ ++ + D G MD F R ++ ++
Sbjct: 245 YNNLISGFLNLENEAKAIELFDELKERCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLL 304
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK------MDDASYKFMMKALSD 275
D R N L+ L++ EA + FD M+ ++ S+ M+
Sbjct: 305 DRQFRMTPVTCNALLEVLLKHDKKAEAWALFDQMLDNHTPPNFQAVNSDSFSVMVNECVK 364
Query: 276 GGKLDEILEI 285
GK E +E+
Sbjct: 365 LGKFTEAIEV 374
>gi|147772351|emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]
Length = 627
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 184/328 (56%), Gaps = 10/328 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD +VY+ L+ GF+ + LF+ELKE+ +V DGVV G+ M YF K
Sbjct: 233 MLNKGHGADSLVYNNLISGFLNLENEAKAIELFDELKERC--LVYDGVVNGTFMDWYFTK 290
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+ AM+ Y + + +M+ V N++L+ L + K EA LFD+M + H PP
Sbjct: 291 GREKCAMDSYKSLL--DRQFRMTPVTCNALLEVLLKHDKKAEAWALFDQMLDNHTPPNFQ 348
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP----DTLSFNNLIDQLCKNGMLA 176
AVN SF+VM + G+F +AIEVF+K+G+ + S D +NN+I + C+NG+L+
Sbjct: 349 AVNSDSFSVMVNECVKLGKFTEAIEVFKKVGKKQGSKPFAMDVAGYNNIIARFCENGLLS 408
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EAE+L+GE+S K + PD Y ++A F + R DD F + VDSGLR ++ N++
Sbjct: 409 EAEQLFGELSTKSLTPDVNIYRTFIEAYFGMERADDALQMFNRFVDSGLRVIVSFANKVF 468
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+LV G E M +K K D +Y+ ++K L D +++G ++ I
Sbjct: 469 DELVNKGKAGECVPVLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMV-RYNI 527
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLME 323
+ L+EFV KEGR EE+ +L+E
Sbjct: 528 GVTPSLREFVVEAFGKEGRSEEIERLLE 555
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 100/250 (40%), Gaps = 46/250 (18%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S+ + + N+++ A+ N +FD+A+ LF N+ N + N+ S+NV+ + +C
Sbjct: 129 SNTRPTVFTCNAIIAAMYRNKRFDDAIALFQFFFNQSN----IVPNIVSYNVLINTHCDA 184
Query: 138 GRFKDAIEVFRKM---GEYRCSP---------------------------------DTLS 161
GR ++++R + + SP D+L
Sbjct: 185 GRVDVGLDIYRHILANAPFSPSPVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLV 244
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+NNLI A+A EL+ E+ ++ + D G MD F R ++ ++
Sbjct: 245 YNNLISGFLNLENEAKAIELFDELKERCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLL 304
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK------MDDASYKFMMKALSD 275
D R N L+ L++ EA + FD M+ ++ S+ M+
Sbjct: 305 DRQFRMTPVTCNALLEVLLKHDKKAEAWALFDQMLDNHTPPNFQAVNSDSFSVMVNECVK 364
Query: 276 GGKLDEILEI 285
GK E +E+
Sbjct: 365 LGKFTEAIEV 374
>gi|297739467|emb|CBI29649.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 184/328 (56%), Gaps = 10/328 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD +VY+ L+ GF+ + LF+ELKE+ +V DGVV G+ M YF K
Sbjct: 233 MLNKGHGADSLVYNNLISGFLNLENEAKAIELFDELKERC--LVYDGVVNGTFMDWYFTK 290
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+ AM+ Y + + +M+ V N++L+ L + K EA LFD+M + H PP
Sbjct: 291 GREKCAMDSYKSLL--DRQFRMTPVTCNALLEVLLKHDKKAEAWALFDQMLDNHTPPNFQ 348
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP----DTLSFNNLIDQLCKNGMLA 176
AVN SF+VM + G+F +AIEVF+K+G+ + S D +NN+I + C+NG+L+
Sbjct: 349 AVNSDSFSVMVNECVKLGKFTEAIEVFKKVGKKQGSKPFAMDVAGYNNIIARFCENGLLS 408
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EAE+L+GE+S K + PD Y ++A F + R DD F + VDSGLR ++ N++
Sbjct: 409 EAEQLFGELSTKSLTPDVNIYRTFIEAYFGMERADDALQMFNRFVDSGLRVIVSFANKVF 468
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+LV G E M +K K D +Y+ ++K L D +++G ++ I
Sbjct: 469 DELVNKGKAGECVPVLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMV-RYNI 527
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLME 323
+ L+EFV KEGR EE+ +L+E
Sbjct: 528 GVTPSLREFVVEAFGKEGRSEEIERLLE 555
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 100/250 (40%), Gaps = 46/250 (18%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S+ + + N+++ A+ N +FD+A+ LF N+ N + N+ S+NV+ + +C
Sbjct: 129 SNTRPTVFTCNAIIAAMYRNKRFDDAIALFQFFFNQSN----IVPNIVSYNVLINTHCDA 184
Query: 138 GRFKDAIEVFRKM---GEYRCSP---------------------------------DTLS 161
GR ++++R + + SP D+L
Sbjct: 185 GRVDVGLDIYRHILANAPFSPSPVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLV 244
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+NNLI A+A EL+ E+ ++ + D G MD F R ++ ++
Sbjct: 245 YNNLISGFLNLENEAKAIELFDELKERCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLL 304
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK------MDDASYKFMMKALSD 275
D R N L+ L++ EA + FD M+ ++ S+ M+
Sbjct: 305 DRQFRMTPVTCNALLEVLLKHDKKAEAWALFDQMLDNHTPPNFQAVNSDSFSVMVNECVK 364
Query: 276 GGKLDEILEI 285
GK E +E+
Sbjct: 365 LGKFTEAIEV 374
>gi|449484080|ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cucumis sativus]
Length = 559
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 207/412 (50%), Gaps = 21/412 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD +V++ L+ GF+ G+ + LF+ELKE+ +V DGVV + M +F +
Sbjct: 49 MLNKGHGADSLVFNNLISGFLNLGNLEKANELFDELKERC--LVYDGVVNATFMDWFFNQ 106
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+EAME Y + + KM N +L+ L + K EA LFD+M + H PP
Sbjct: 107 GKEKEAMESYKSLL--DRQFKMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQ 164
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMG-EYRCSP---DTLSFNNLIDQLCKNGMLA 176
AVN +FN+M + G+F +A+E FRK+G + + P D +NN+I + C+ GM+A
Sbjct: 165 AVNSDTFNIMVNECFKHGKFAEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMA 224
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+AE + E+ K ++PD T+ L+++ ++ ++DD F +MVD GLR + N +
Sbjct: 225 DAETFFAELCSKSLSPDVPTHRTLIESYLKIEQIDDALRVFNRMVDVGLRVVASFGNMVF 284
Query: 237 GKLVQVG-MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
G+L++ G D A+ + + K D Y +++ L + G LD E++ I+ GI
Sbjct: 285 GELIKNGKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIM-RYGI 343
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLI 355
+ L+EFVK K GR EE+ +L+ + A A R + + +
Sbjct: 344 GLTPTLEEFVKEAFVKAGRHEEIERLLNMNKWGHA--------AYRPLSGPPRISQSQVP 395
Query: 356 PSKFGDKVGGTEMADNANANEAASVAEAQAGKEVNLEEATAVESASADANTT 407
P G G +MA+ N S+ G + + ++ S TT
Sbjct: 396 PQMGGPLQGPPQMAE---PNWRPSINPQARGTYSSPQMSSPSHFQSGSPQTT 444
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 133/302 (44%), Gaps = 46/302 (15%)
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA--- 121
E + Y + N+ SAV + L + G+ +EA+ L M N+ + L
Sbjct: 5 ETLGVYRHIIA-NAPFSPSAVTYRHLTKGLIDAGRIEEAVDLLREMLNKGHGADSLVFNN 63
Query: 122 -----VNLGSFN----------------------VMADGYCGQGRFKDAIEVFRKM--GE 152
+NLG+ D + QG+ K+A+E ++ + +
Sbjct: 64 LISGFLNLGNLEKANELFDELKERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQ 123
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP-----DEYTYGLLMDACFEV 207
++ P T N L++ L K+ EA L+ +M D P + T+ ++++ CF+
Sbjct: 124 FKMVPATC--NVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKH 181
Query: 208 NRVDDGATYFRKM-VDSGLRP---NLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMD 262
+ + FRK+ RP ++A YN ++ + + GM+ +A++FF ++ K L D
Sbjct: 182 GKFAEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMADAETFFAELCSKSLSPD 241
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+++ ++++ ++D+ L + ++ D G+ V GEL K G+ + +++
Sbjct: 242 VPTHRTLIESYLKIEQIDDALRVFNRMV-DVGLRVVASFGNMVFGELIKNGKAADCAQIL 300
Query: 323 EK 324
K
Sbjct: 301 TK 302
>gi|449460722|ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cucumis sativus]
Length = 871
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 206/412 (50%), Gaps = 21/412 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD +V++ L+ GF+ G+ + LF+ELKE+ +V DGVV + M +F +
Sbjct: 215 MLNKGHGADSLVFNNLISGFLNLGNLEKANELFDELKERC--LVYDGVVNATFMDWFFNQ 272
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+EAME Y + + KM N +L+ L + K EA LFD+M + H PP
Sbjct: 273 GKEKEAMESYKSLL--DRQFKMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQ 330
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMG-EYRCSP---DTLSFNNLIDQLCKNGMLA 176
AVN +FN+M + G+F +A+E FRK+G + + P D +NN+I + C+ GM+A
Sbjct: 331 AVNSDTFNIMVNECFKHGKFAEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMA 390
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+AE + E+ K ++PD T+ L+++ ++ ++DD F +MVD GLR + N +
Sbjct: 391 DAETFFAELCSKSLSPDVPTHRTLIESYLKIEQIDDALRVFNRMVDVGLRVVASFGNMVF 450
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
G+L++ G + M ++ K D Y +++ L + G LD E++ I+ GI
Sbjct: 451 GELIKNGKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIM-RYGI 509
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLI 355
+ L+EFVK K GR EE+ +L+ + A A R + + +
Sbjct: 510 GLTPTLEEFVKEAFVKAGRHEEIERLLNMNKWGHA--------AYRPLSGPPRISQSQVP 561
Query: 356 PSKFGDKVGGTEMADNANANEAASVAEAQAGKEVNLEEATAVESASADANTT 407
P G G +MA+ N S+ G + + ++ S TT
Sbjct: 562 PQMGGPLQGPPQMAE---PNWRPSINPQARGTYSSPQMSSPSHFQSGSPQTT 610
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 152/345 (44%), Gaps = 50/345 (14%)
Query: 22 RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVK 81
R D+ +F+ F + VVS Y +L+ + +G + +E Y + N+
Sbjct: 132 RYSDAIALFQFFFNQSNIVPNVVS----YNNLINAHCDEGRVDVGLEVYRHIIA-NAPFS 186
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA--------VNLGSFN----- 128
SAV + L + G+ +EA+ L M N+ + L +NLG+
Sbjct: 187 PSAVTYRHLTKGLIDAGRIEEAVDLLREMLNKGHGADSLVFNNLISGFLNLGNLEKANEL 246
Query: 129 -----------------VMADGYCGQGRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQL 169
D + QG+ K+A+E ++ + +++ P T N L++ L
Sbjct: 247 FDELKERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATC--NVLLEVL 304
Query: 170 CKNGMLAEAEELYGEMSDKGVNP-----DEYTYGLLMDACFEVNRVDDGATYFRKM-VDS 223
K+ EA L+ +M D P + T+ ++++ CF+ + + FRK+
Sbjct: 305 LKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKHGKFAEAVETFRKVGTQP 364
Query: 224 GLRP---NLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
RP ++A YN ++ + + GM+ +A++FF ++ K L D +++ ++++ ++
Sbjct: 365 KSRPFAMDVAGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYLKIEQI 424
Query: 280 DEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
D+ L + ++ D G+ V GEL K G+ + +++ K
Sbjct: 425 DDALRVFNRMV-DVGLRVVASFGNMVFGELIKNGKAADCAQILTK 468
>gi|356541846|ref|XP_003539383.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Glycine max]
Length = 782
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 196/376 (52%), Gaps = 14/376 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD +VY+ L+ GF+ + D LF+ELKE+ +V DGVV + M+ +F K
Sbjct: 215 MLSKGHGADSLVYNNLISGFLHLDNFDKAIELFDELKERC--LVYDGVVNATFMEWFFSK 272
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +++AM+ Y + + +M+ N +L+AL N+ K EA LFD M + H PP
Sbjct: 273 GRDKDAMDSYRSLL--DRQFRMTPATCNVLLEALLNHSKTSEAWSLFDNMLDNHTPPNFQ 330
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-P---DTLSFNNLIDQLCKNGMLA 176
AVN SFN+M + G F+ A+ F+K+G S P D +NN+I + C+N ML+
Sbjct: 331 AVNSDSFNIMVNHCFKLGNFELALSTFKKVGSKPNSKPFAMDVAGYNNIIARFCENAMLS 390
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+AE L+ E+ K ++PD T+ L++ ++R+DD F +MVDSGLR N +
Sbjct: 391 QAETLFEELCSKSLSPDVPTHRTLIEVYLRMDRIDDALRIFHRMVDSGLRVVATFGNTVF 450
Query: 237 GKLVQVG-MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+L++ G +D A+ + K K D Y+ ++K L G LD+ E++ ++ G+
Sbjct: 451 HELIKNGKAIDCAQILSKMGEKDPKPDPTCYEVVIKGLCADGLLDKSRELLDEVM-RYGV 509
Query: 296 EFSEELQEFVKGELSKEGREEEVVKL--MEKKEREKAEAKAREAEAAEAAKRSAR--AAI 351
+ L+EFV K GR +E+ +L M + + R A + ++ A
Sbjct: 510 GVTSSLREFVTEVFKKAGRGDEIERLLDMNRFAYTPRPSPPRPAYCPPLVRSPSQMAAGA 569
Query: 352 ASLIPSKFGDKVGGTE 367
A PS F ++ +
Sbjct: 570 AHSPPSGFPTRMAAQQ 585
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 102/222 (45%), Gaps = 16/222 (7%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S + + N+++ A+ +G+++EA+ LF + N + N+ S+N + + +C Q
Sbjct: 111 SVTRPTVFTCNAIIAAMYRSGRYEEAIALFHFFFKQSN----IVPNIVSYNNVINTHCDQ 166
Query: 138 GRFKDAIEVFRK-MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
GR A+EV+R + SP +++ +L L + ++EA +L EM KG D
Sbjct: 167 GRVDVALEVYRHVVANAPFSPSPVTYRHLTKGLIHSERISEALDLLREMLSKGHGADSLV 226
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK------S 250
Y L+ ++ D F ++ + L VY+ +V + + S
Sbjct: 227 YNNLISGFLHLDNFDKAIELFDELKERCL-----VYDGVVNATFMEWFFSKGRDKDAMDS 281
Query: 251 FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
+ ++ ++ +M A+ +++AL + K E + +LD+
Sbjct: 282 YRSLLDRQFRMTPATCNVLLEALLNHSKTSEAWSLFDNMLDN 323
>gi|356560119|ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Glycine max]
Length = 861
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 183/329 (55%), Gaps = 12/329 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD +VY+ L+ GF+ + D LFEELKE+ +V DGVV + M+ +F K
Sbjct: 215 MLTKGHGADSLVYNNLISGFLHLDNFDKAIELFEELKERC--LVYDGVVNATFMEWFFGK 272
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++EAM+ Y + + +M+ N +L+ L + K +EA LF M + H PP
Sbjct: 273 GRDKEAMDSYRSLL--DRQFRMTPATCNVLLEVLLKHSKSNEAWSLFHLMLDNHTPPNFQ 330
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-P---DTLSFNNLIDQLCKNGMLA 176
AVN +FN+M + G F+DA+ F+K G S P D +NN+I + +NGML+
Sbjct: 331 AVNSDTFNIMVNHCFKLGNFEDALATFKKFGTKPNSKPFAMDVAGYNNIIARFSENGMLS 390
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR-L 235
AE L+ E+ K ++PD T+ L++A +NR+DD F +MVD+GLR +A + R
Sbjct: 391 HAETLFEELCSKSLSPDVPTHRTLIEAYLRMNRIDDALRIFNRMVDTGLR-VVATFGRER 449
Query: 236 VGKLVQVG-MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+L++ G LD A+ + K K D Y+ ++K L G LD+ LE++ ++ G
Sbjct: 450 DARLIKNGKALDCAQILSKMGEKDPKPDPTCYEVVIKGLCADGLLDKSLELLDEVMRY-G 508
Query: 295 IEFSEELQEFVKGELSKEGREEEVVKLME 323
+ + L+EFV K GR +E+ +L++
Sbjct: 509 VGLTSSLREFVTEVFKKAGRSDEIERLLD 537
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 101/221 (45%), Gaps = 14/221 (6%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S+ + + N+++ A+ +G+++EA+ LF + N + N+ S+N + + +C +
Sbjct: 111 SATRPTVFTCNAIIAAMYRSGRYEEAIGLFQFFFKQSN----IVPNIVSYNNVINTHCDE 166
Query: 138 GRFKDAIEVFRK-MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
GR A+EV+R + SP +++ +L L ++ ++EA +L EM KG D
Sbjct: 167 GRVDVALEVYRHVLANAPFSPSPVTYRHLTKGLIQSSRISEALDLLREMLTKGHGADSLV 226
Query: 197 YGLLMDACFEVNRVDDGATYF-----RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
Y L+ ++ D F R +V G+ N GK +D +S
Sbjct: 227 YNNLISGFLHLDNFDKAIELFEELKERCLVYDGVV-NATFMEWFFGKGRDKEAMDSYRSL 285
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
D ++ +M A+ +++ L K +E + +LD+
Sbjct: 286 LD---RQFRMTPATCNVLLEVLLKHSKSNEAWSLFHLMLDN 323
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 10/193 (5%)
Query: 70 YNEAVG------ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
Y EA+G + S++ + V+ N+V++ C+ G+ D AL+++ + N P + +
Sbjct: 133 YEEAIGLFQFFFKQSNIVPNIVSYNNVINTHCDEGRVDVALEVYRHVLA--NAP--FSPS 188
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ + G R +A+++ R+M D+L +NNLI +A EL+
Sbjct: 189 PVTYRHLTKGLIQSSRISEALDLLREMLTKGHGADSLVYNNLISGFLHLDNFDKAIELFE 248
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ ++ + D M+ F R + +R ++D R A N L+ L++
Sbjct: 249 ELKERCLVYDGVVNATFMEWFFGKGRDKEAMDSYRSLLDRQFRMTPATCNVLLEVLLKHS 308
Query: 244 MLDEAKSFFDIMV 256
+EA S F +M+
Sbjct: 309 KSNEAWSLFHLML 321
>gi|242091233|ref|XP_002441449.1| hypothetical protein SORBIDRAFT_09g026880 [Sorghum bicolor]
gi|241946734|gb|EES19879.1| hypothetical protein SORBIDRAFT_09g026880 [Sorghum bicolor]
Length = 536
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 168/286 (58%), Gaps = 9/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G AD +VY+ L+ G++ D F LF EL E+ +V DGVV+ + M+GY+ +
Sbjct: 232 MLDRGAGADSLVYNNLIAGYIDLDDWGRAFELFNELAERC--LVYDGVVHTTFMEGYWRQ 289
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++EAM+ Y + + KM+ N +L+ L +GK EA L++ M + H PP +
Sbjct: 290 GKDKEAMDNYQSLL--DRGFKMTPATCNVLLETLFKHGKHKEANDLWETMIDNHTPPSFI 347
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N S+NVM + +G+FK+AIEVF + D FNN+I +LC+NGML EAE+
Sbjct: 348 GINAESYNVMVNQCFREGKFKEAIEVFHRQPRKNVQMDVGCFNNIIGKLCENGMLGEAEK 407
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD---SGLRPNLAVYNRLVG 237
L+ EM K V PD +TY L+D+CF+ RV+D YF KM D G + N+ +NR+
Sbjct: 408 LFEEMEKKSVLPDVHTYTYLVDSCFKEGRVEDTMGYFYKMADGKQHGPKFNIGFFNRMFE 467
Query: 238 KLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALS-DGGKLDE 281
L + G +D+A + M K++K + +++ ++KAL + G LD+
Sbjct: 468 GLTEAGRIDDALKVYGRMPDKEIKPNMTTFEILVKALCKEEGDLDQ 513
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 10/214 (4%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S++ + V+ N+++ A C + D A++++ M P AV +F + G
Sbjct: 164 SNIVPNIVSYNTLIHAHCEADRVDTAVQVYHDMLAS-APFSPSAV---TFRHLTKGLVAV 219
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
GR DA+++ R+M + D+L +NNLI A EL+ E++++ + D +
Sbjct: 220 GRIHDALDLLREMLDRGAGADSLVYNNLIAGYIDLDDWGRAFELFNELAERCLVYDGVVH 279
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
M+ + + + ++ ++D G + A N L+ L + G EA ++ M+
Sbjct: 280 TTFMEGYWRQGKDKEAMDNYQSLLDRGFKMTPATCNVLLETLFKHGKHKEANDLWETMID 339
Query: 258 K------LKMDDASYKFMMKALSDGGKLDEILEI 285
+ ++ SY M+ GK E +E+
Sbjct: 340 NHTPPSFIGINAESYNVMVNQCFREGKFKEAIEV 373
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 104/242 (42%), Gaps = 20/242 (8%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDT 159
D+A+ LFD N + N+ S+N + +C R A++V+ M SP
Sbjct: 151 DDAVALFDFFFRRSN----IVPNIVSYNTLIHAHCEADRVDTAVQVYHDMLASAPFSPSA 206
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
++F +L L G + +A +L EM D+G D Y L+ +++ F +
Sbjct: 207 VTFRHLTKGLVAVGRIHDALDLLREMLDRGAGADSLVYNNLIAGYIDLDDWGRAFELFNE 266
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAK------SFFDIMVKKLKMDDASYKFMMKAL 273
+ + L VY+ +V G + K ++ ++ + KM A+ +++ L
Sbjct: 267 LAERCL-----VYDGVVHTTFMEGYWRQGKDKEAMDNYQSLLDRGFKMTPATCNVLLETL 321
Query: 274 SDGGKLDEILEIVGGILDDGG----IEFSEELQEFVKGELSKEGREEEVVKLMEKKEREK 329
GK E ++ ++D+ I + E + + +EG+ +E +++ ++ R+
Sbjct: 322 FKHGKHKEANDLWETMIDNHTPPSFIGINAESYNVMVNQCFREGKFKEAIEVFHRQPRKN 381
Query: 330 AE 331
+
Sbjct: 382 VQ 383
>gi|46095227|gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
Length = 896
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 180/327 (55%), Gaps = 10/327 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD +V++ L+ GF+ G+ LF+ELKE+ +V DGVV + M +F +
Sbjct: 241 MLNKGHGADSLVFNNLISGFLNLGNLVKANELFDELKERC--LVYDGVVNATFMDWFFNQ 298
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+EAME Y + + KM N +L+ L + K EA LFD+M + H PP
Sbjct: 299 GKEKEAMESYKSLL--DRQFKMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQ 356
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMG-EYRCSP---DTLSFNNLIDQLCKNGMLA 176
AVN +FN+M + G+F +A+E FRK+G + + P D +NN+I + C+ GM+A
Sbjct: 357 AVNSDTFNIMVNECFKLGKFTEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMA 416
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+AE + E+ K ++PD T+ L+++ ++ ++DD F +MVD GLR + N +
Sbjct: 417 DAETFFAELCSKSLSPDVPTHRTLIESYLKIEQIDDALRVFNRMVDVGLRVVASFGNMVF 476
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
G+L++ G + M ++ K D Y +++ L + G LD E++ I+ GI
Sbjct: 477 GELIKNGKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDTSRELLDQIM-RYGI 535
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLM 322
+ L+EFVK K GR EE+ +L+
Sbjct: 536 GLTPTLEEFVKDAFVKAGRHEEIERLL 562
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 153/345 (44%), Gaps = 50/345 (14%)
Query: 22 RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVK 81
R D+ +F+ F + VVS Y +L+ + +G + +E Y + N+
Sbjct: 158 RYSDAIALFQFFFNQSNIVPNVVS----YNNLINAHCDEGRVDVGLEVYRHIIA-NAPFS 212
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA--------VNLGSF------ 127
SAV + L + G+ +EA+ L M N+ + L +NLG+
Sbjct: 213 PSAVTYRHLTKGLIDAGRIEEAVDLLREMLNKGHGADSLVFNNLISGFLNLGNLVKANEL 272
Query: 128 ----------------NVMADGYCGQGRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQL 169
D + QG+ K+A+E ++ + +++ P T N L++ L
Sbjct: 273 FDELKERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATC--NVLLEVL 330
Query: 170 CKNGMLAEAEELYGEMSDKGVNP-----DEYTYGLLMDACFEVNRVDDGATYFRKM-VDS 223
K+ EA L+ +M D P + T+ ++++ CF++ + + FRK+
Sbjct: 331 LKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFTEAVETFRKVGTQP 390
Query: 224 GLRP---NLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
RP ++A YN ++ + + GM+ +A++FF ++ K L D +++ ++++ ++
Sbjct: 391 KSRPFAMDVAGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYLKIEQI 450
Query: 280 DEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
D+ L + ++ D G+ V GEL K G+ + +++ K
Sbjct: 451 DDALRVFNRMV-DVGLRVVASFGNMVFGELIKNGKAADCAQILTK 494
>gi|297843834|ref|XP_002889798.1| glutamine-rich protein23 [Arabidopsis lyrata subsp. lyrata]
gi|297335640|gb|EFH66057.1| glutamine-rich protein23 [Arabidopsis lyrata subsp. lyrata]
Length = 913
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 169/332 (50%), Gaps = 10/332 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD VY+ L+ G++ GD D F+ELK K V DG+V + M+ +F K
Sbjct: 278 MLSKGQAADSTVYNNLIRGYLDLGDFDKAIEFFDELKSKC--TVYDGIVNATFMEHWFEK 335
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++EAME Y + + +M N +L+ GK DEA LF+ M + H PP L
Sbjct: 336 GNDKEAMESYRSLL--DKKFRMHPPTGNVLLEVFLKYGKKDEAWALFNEMLDNHTPPNIL 393
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-P---DTLSFNNLIDQLCKNGMLA 176
+VN + ++M + G F +AI F+K+G S P D L + N++ + C+ GML
Sbjct: 394 SVNSDTVSIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLT 453
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EAE + E K + D ++ ++DA + R+DD +MVD LR R+
Sbjct: 454 EAERFFAEGVSKSLPADAPSHRAMIDAYLKAERMDDALKMLDRMVDVNLRVVADFGTRVF 513
Query: 237 GKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
G+L++ G L E+ M ++ K D + Y +++ L DG LD+ +IVG ++ +
Sbjct: 514 GELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGDMIRH-NV 572
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+ L+EF K GR EE+ K++ R
Sbjct: 573 GVTTVLREFTIEVFEKAGRREEIEKILNSVAR 604
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 152/357 (42%), Gaps = 63/357 (17%)
Query: 22 RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEA-------- 73
R +S +F+ F K +V + V Y ++ + +G +EA+E Y
Sbjct: 195 RYSESISLFQYFF----KQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAP 250
Query: 74 -----------------VGENSSVKMSAVANNSVLDALCNN---------GKFDEALKLF 107
+G+ +S+ ++ D+ N G FD+A++ F
Sbjct: 251 SSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAIEFF 310
Query: 108 DRMKNEHNPPKRLAVNLGSFN-VMADGYCGQGRFKDAIEVFRKM--GEYRCSPDTLSFNN 164
D +K+ + V G N + + +G K+A+E +R + ++R P T N
Sbjct: 311 DELKS------KCTVYDGIVNATFMEHWFEKGNDKEAMESYRSLLDKKFRMHPPT--GNV 362
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNP-----DEYTYGLLMDACFEVNRVDDGATYFRK 219
L++ K G EA L+ EM D P + T ++++ CF++ + F+K
Sbjct: 363 LLEVFLKYGKKDEAWALFNEMLDNHTPPNILSVNSDTVSIMVNECFKMGEFSEAINTFKK 422
Query: 220 MVDSGLRPNLAV-----YNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKAL 273
V S + V Y +V + + GML EA+ FF + + K L D S++ M+ A
Sbjct: 423 -VGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSKSLPADAPSHRAMIDAY 481
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKK-EREK 329
++D+ L+++ ++ D + + V GEL K G+ E +++ K ERE
Sbjct: 482 LKAERMDDALKMLDRMV-DVNLRVVADFGTRVFGELIKNGKLTESAEVLTKMGEREP 537
>gi|15218484|ref|NP_172498.1| glutamine-rich protein 23 [Arabidopsis thaliana]
gi|75213379|sp|Q9SY69.1|PPR29_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g10270; AltName: Full=Protein GLUTAMINE-RICH PROTEIN
23
gi|4914329|gb|AAD32877.1|AC005489_15 F14N23.15 [Arabidopsis thaliana]
gi|332190439|gb|AEE28560.1| glutamine-rich protein 23 [Arabidopsis thaliana]
Length = 913
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 169/332 (50%), Gaps = 10/332 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD VY+ L+ G++ GD D F+ELK K V DG+V + M+ +F K
Sbjct: 278 MLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKC--TVYDGIVNATFMEYWFEK 335
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++EAME Y + + +M N +L+ GK DEA LF+ M + H PP L
Sbjct: 336 GNDKEAMESYRSLL--DKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNIL 393
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-P---DTLSFNNLIDQLCKNGMLA 176
+VN + +M + G F +AI F+K+G S P D L + N++ + C+ GML
Sbjct: 394 SVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLT 453
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EAE + E + + D ++ ++DA + R+DD +MVD LR R+
Sbjct: 454 EAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVF 513
Query: 237 GKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
G+L++ G L E+ M ++ K D + Y +++ L DG LD+ +IVG ++ +
Sbjct: 514 GELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRH-NV 572
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+ L+EF+ K GR EE+ K++ R
Sbjct: 573 GVTTVLREFIIEVFEKAGRREEIEKILNSVAR 604
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 139 RFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE-MSDKGVNPDEYT 196
R+ ++I +F+ + P+ +S+N +I+ C G + EA E+Y +++ P T
Sbjct: 195 RYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVT 254
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
Y L + R+ D A+ R+M+ G + VYN L+ + +G D+A FFD +
Sbjct: 255 YRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELK 314
Query: 257 KKLKMDD 263
K + D
Sbjct: 315 SKCTVYD 321
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 153/357 (42%), Gaps = 63/357 (17%)
Query: 22 RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEA-------- 73
R +S +F+ F K +V + V Y ++ + +G +EA+E Y
Sbjct: 195 RYSESISLFQYFF----KQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAP 250
Query: 74 -----------------VGENSSVKMSAVANNSVLDALCNN---------GKFDEALKLF 107
+G+ +S+ ++ D+ N G FD+A++ F
Sbjct: 251 SSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFF 310
Query: 108 DRMKNEHNPPKRLAVNLGSFN-VMADGYCGQGRFKDAIEVFRKM--GEYRCSPDTLSFNN 164
D +K+ + V G N + + +G K+A+E +R + ++R P T N
Sbjct: 311 DELKS------KCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPT--GNV 362
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNP-----DEYTYGLLMDACFEVNRVDDGATYFRK 219
L++ K G EA L+ EM D P + T G++++ CF++ + F+K
Sbjct: 363 LLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKK 422
Query: 220 MVDSGLRPNLAV-----YNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKAL 273
V S + V Y +V + + GML EA+ FF + + + L D S++ M+ A
Sbjct: 423 -VGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAY 481
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKK-EREK 329
++D+ ++++ ++ D + + V GEL K G+ E +++ K ERE
Sbjct: 482 LKAERIDDAVKMLDRMV-DVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREP 537
>gi|224129468|ref|XP_002328724.1| predicted protein [Populus trichocarpa]
gi|222839022|gb|EEE77373.1| predicted protein [Populus trichocarpa]
Length = 689
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 184/371 (49%), Gaps = 11/371 (2%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG AD +VY+ ++ GF+ G+ + F ELKE+ +V DGV+ + M +F +
Sbjct: 244 MLVKGHGADSLVYNNVIKGFLELGNLEKADEFFNELKERC--LVYDGVINATYMDWWFKQ 301
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++EAME Y ++ + K+ N++L+ L GK + A LF+ M + H PP
Sbjct: 302 GKDKEAMESYKS--WQDRNFKVVPATCNTILEVLVKYGKKEAAWALFEHMLDNHTPPTHQ 359
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP----DTLSFNNLIDQLCKNGMLA 176
VN +FN M + +G F++AI F+K G S D +NN+I + C+NGM+
Sbjct: 360 GVNSDTFNTMVNECFREGEFEEAINTFKKAGTKPGSKPFQMDVAGYNNIIARFCENGMMK 419
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+AEE +S K + PD T+ L+D ++ +DD F KM D+GLR + R+
Sbjct: 420 QAEEFLAALSAKCLTPDVTTFRTLIDTYLKMEEIDDVLRMFNKMADAGLRVVASFGTRVF 479
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
G+L++ G E+ M K K D + Y +++ L + G LD +IV ++ G+
Sbjct: 480 GELIKNGKAVESAEILTKMGNKDPKPDSSIYDVVVRGLCNAGALDMGKDIVDQMM-KYGV 538
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLI 355
L++FV GR EV ++++ + A + + + A+ L
Sbjct: 539 GVPPVLKDFVLEVFENAGRGSEVKSVLDQSKWINNSRPAYPRQPQSQHEPTQMASGWPLG 598
Query: 356 PSKF-GDKVGG 365
PS G + G
Sbjct: 599 PSPLMGKSISG 609
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 139 RFKDAIEVFRKMGE-YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD-KGVNPDEYT 196
R+ DAI +F+ E + P+ +S+NNLI+ C G + E+Y + + +P T
Sbjct: 161 RYDDAIALFKFFFEQHHIVPNVVSYNNLINAHCDEGRVDVGLEVYRRIIEIAPFSPSSVT 220
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
Y L + R++D R+M+ G + VYN ++ +++G L++A FF+
Sbjct: 221 YRHLTKGLIDAERMEDAVALLREMLVKGHGADSLVYNNVIKGFLELGNLEKADEFFN 277
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E + + V+ N++++A C+ G+ D L+++ R+ E P +V ++ + G
Sbjct: 174 EQHHIVPNVVSYNNLINAHCDEGRVDVGLEVYRRII-EIAPFSPSSV---TYRHLTKGLI 229
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
R +DA+ + R+M D+L +NN+I + G L +A+E + E+ ++ + D
Sbjct: 230 DAERMEDAVALLREMLVKGHGADSLVYNNVIKGFLELGNLEKADEFFNELKERCLVYDGV 289
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
MD F+ + + ++ D + A N ++ LV+ G + A + F+ M
Sbjct: 290 INATYMDWWFKQGKDKEAMESYKSWQDRNFKVVPATCNTILEVLVKYGKKEAAWALFEHM 349
Query: 256 V 256
+
Sbjct: 350 L 350
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S + + N+++ A+ ++D+A+ LF +H+ + N+ S+N + + +C +
Sbjct: 140 SRTRPTVFTCNAIIAAMYRAKRYDDAIALFKFFFEQHH----IVPNVVSYNNLINAHCDE 195
Query: 138 GRFKDAIEVFRKMGEY-RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
GR +EV+R++ E SP ++++ +L L + +A L EM KG D
Sbjct: 196 GRVDVGLEVYRRIIEIAPFSPSSVTYRHLTKGLIDAERMEDAVALLREMLVKGHGADSLV 255
Query: 197 YGLLMDACFEVNRVDDGATYFRKM 220
Y ++ E+ ++ +F ++
Sbjct: 256 YNNVIKGFLELGNLEKADEFFNEL 279
>gi|357520879|ref|XP_003630728.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524750|gb|AET05204.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 918
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 174/328 (53%), Gaps = 10/328 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K AD +VY+ L+ GF+ G+ D LF+ELK + V DGVV + M+ +F +
Sbjct: 215 MLAKNHGADSMVYNNLISGFLELGNLDKANELFDELKGRCS--VYDGVVNATYMEWFFKQ 272
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++EAM+ Y + + +M+ N +L+ L + K EA KLFD+M + H PP
Sbjct: 273 GRDKEAMDSYKSFM--DREFRMTPATCNVLLEVLLKHDKKKEAWKLFDQMLDNHTPPNFQ 330
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMG-EYRCSP---DTLSFNNLIDQLCKNGMLA 176
AVN +FN+M + G+F +A++ FRK+G + P D + N++ + C+ GM++
Sbjct: 331 AVNSDTFNIMVNECFKHGKFDEALDTFRKVGTKINSKPFIMDVAGYRNIVSRFCEIGMMS 390
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EA+ L+ E K ++ D T+ ++D +V +DD F KMVD GLR NR+
Sbjct: 391 EADTLFQESLSKHLSADVPTHTAMIDGYLKVGNIDDALRVFNKMVDRGLRVTATFGNRVF 450
Query: 237 GKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+L++ G + E M + K D Y+ ++K L G LD+ E++ ++ G+
Sbjct: 451 DELIKNGKVIECAQILSKMGGQDPKPDPTCYEVVIKGLCAEGLLDKSRELLDEVM-RYGV 509
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLME 323
+ L+E V G+ EE+ +L++
Sbjct: 510 GVTPALRESVTKVFKNAGKGEEIERLLD 537
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 99/250 (39%), Gaps = 46/250 (18%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
SS + + N+++ A+ ++ +A+ LF N+ N L N+ S+N + + +C +
Sbjct: 111 SSTRPTVFTCNAIIAAMYRAKRYSDAIALFHFFFNQSN----LVPNIVSYNNVINTHCDE 166
Query: 138 GRFKDAIEVFRKMGE----------YRC--------------------------SPDTLS 161
GR A+EV+R + E YR D++
Sbjct: 167 GRVDVALEVYRHIIEHAPFGPSSVTYRHLTKGLISVGRIDEANDLLVEMLAKNHGADSMV 226
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+NNLI + G L +A EL+ E+ + D M+ F+ R + ++ +
Sbjct: 227 YNNLISGFLELGNLDKANELFDELKGRCSVYDGVVNATYMEWFFKQGRDKEAMDSYKSFM 286
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK------MDDASYKFMMKALSD 275
D R A N L+ L++ EA FD M+ ++ ++ M+
Sbjct: 287 DREFRMTPATCNVLLEVLLKHDKKKEAWKLFDQMLDNHTPPNFQAVNSDTFNIMVNECFK 346
Query: 276 GGKLDEILEI 285
GK DE L+
Sbjct: 347 HGKFDEALDT 356
>gi|224120050|ref|XP_002331124.1| predicted protein [Populus trichocarpa]
gi|222872852|gb|EEF09983.1| predicted protein [Populus trichocarpa]
Length = 832
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 193/393 (49%), Gaps = 19/393 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD +VY+ ++ GF+ G+ + F+ELKE+ +V DGV+ + M +F +
Sbjct: 243 MLAKGHGADSLVYNNVIKGFLELGNLEKANEFFDELKERC--LVYDGVINATFMDWWFKQ 300
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++EAM Y +N K+ N++L+ L GK + A LF+ M + H PP +
Sbjct: 301 GKDKEAMGSYKSWQDKN--FKVVPATCNTILEVLVRYGKKEAACALFEHMLDNHTPPTQQ 358
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP----DTLSFNNLIDQLCKNGMLA 176
AVN +FN+M + + F++AI F+K G S D +NN+I + C+NGM+
Sbjct: 359 AVNSDTFNIMVNECFKEAGFEEAIHTFKKAGTKSGSKHFQMDVAGYNNIIARFCENGMME 418
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
AEE + + K + PD T+ L+DA + +DD KM D+GLR + R+
Sbjct: 419 HAEEFFAALLAKCLTPDVVTFRTLIDAYLKREEIDDVLRTLNKMADAGLRVVASFGTRVF 478
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
G+L++ G E+ M K K D + Y +++ L G+LD +++ ++ G+
Sbjct: 479 GELIKNGKEVESAEILTKMGNKDPKPDSSIYDVVVRGLCSAGELDASKDMLDQMI-KYGV 537
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLI 355
L+EF+ GR E+ ++++ K +R A A + + A +AS
Sbjct: 538 GIPPALKEFLIEVFGNAGRASEIKSVLDE---SKWINISRPAYARQPRSQHETAQMAS-- 592
Query: 356 PSKFGDKVGGTEMADNANANEAASVAEAQAGKE 388
G +G + M + + + ++ + G+
Sbjct: 593 ----GQPLGPSPMMGRSVSRQQSTWSSQTIGQH 621
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 139 RFKDAIEVFRKMGE-YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV-NPDEYT 196
R+ DA+ +F+ E + P+ +S+NNLI+ C G + E+Y + + + +P T
Sbjct: 160 RYDDAVSLFKFFFEKHNIVPNVVSYNNLINAHCDEGKVDLGLEIYRRIIETALFSPSSVT 219
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
Y L + R++D R+M+ G + VYN ++ +++G L++A FFD
Sbjct: 220 YRHLTKGLIDAGRIEDAVALLREMLAKGHGADSLVYNNVIKGFLELGNLEKANEFFD 276
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 90/193 (46%), Gaps = 10/193 (5%)
Query: 70 YNEAVG------ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
Y++AV E ++ + V+ N++++A C+ GK D L+++ R+ + +
Sbjct: 161 YDDAVSLFKFFFEKHNIVPNVVSYNNLINAHCDEGKVDLGLEIYRRIIET----ALFSPS 216
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ + G GR +DA+ + R+M D+L +NN+I + G L +A E +
Sbjct: 217 SVTYRHLTKGLIDAGRIEDAVALLREMLAKGHGADSLVYNNVIKGFLELGNLEKANEFFD 276
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ ++ + D MD F+ + + ++ D + A N ++ LV+ G
Sbjct: 277 ELKERCLVYDGVINATFMDWWFKQGKDKEAMGSYKSWQDKNFKVVPATCNTILEVLVRYG 336
Query: 244 MLDEAKSFFDIMV 256
+ A + F+ M+
Sbjct: 337 KKEAACALFEHML 349
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 99/222 (44%), Gaps = 16/222 (7%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S + + N+++ A+ ++D+A+ LF +HN + N+ S+N + + +C +
Sbjct: 139 SRTRPTVFTCNAIIAAMYRAKRYDDAVSLFKFFFEKHN----IVPNVVSYNNLINAHCDE 194
Query: 138 GRFKDAIEVFRKMGEYRC-SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
G+ +E++R++ E SP ++++ +L L G + +A L EM KG D
Sbjct: 195 GKVDLGLEIYRRIIETALFSPSSVTYRHLTKGLIDAGRIEDAVALLREMLAKGHGADSLV 254
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK------S 250
Y ++ E+ ++ +F ++ + L VY+ ++ + K S
Sbjct: 255 YNNVIKGFLELGNLEKANEFFDELKERCL-----VYDGVINATFMDWWFKQGKDKEAMGS 309
Query: 251 FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
+ K K+ A+ +++ L GK + + +LD+
Sbjct: 310 YKSWQDKNFKVVPATCNTILEVLVRYGKKEAACALFEHMLDN 351
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/105 (20%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVD-SGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P +T ++ A + R DD + F+ + + PN+ YN L+ G +D
Sbjct: 143 PTVFTCNAIIAAMYRAKRYDDAVSLFKFFFEKHNIVPNVVSYNNLINAHCDEGKVDLGLE 202
Query: 251 FFDIMVKKLKMDDAS--YKFMMKALSDGGKLDEILEIVGGILDDG 293
+ +++ +S Y+ + K L D G++++ + ++ +L G
Sbjct: 203 IYRRIIETALFSPSSVTYRHLTKGLIDAGRIEDAVALLREMLAKG 247
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 175/367 (47%), Gaps = 51/367 (13%)
Query: 3 VKGFVADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
V G + P V+YS ++ G +D + F L+ E+ K G+ + V Y +L+ G+F
Sbjct: 188 VDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSK--GISPNVVTYSALISGFFTV 245
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A++ +N+ + EN +K N ++D C +GK E +F M + P +
Sbjct: 246 GQLKDAIDLFNKMILEN--IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVV 303
Query: 121 AV------------------------------NLGSFNVMADGYCGQGRFKDAIEVFRKM 150
++ S+N++ DG+C + +A+ +F++M
Sbjct: 304 TYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEM 363
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
PD +++N+LID LCK G ++ A +L EM D+GV PD TY ++DA + ++V
Sbjct: 364 HHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQV 423
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFM 269
D K+ D G+RPN+ Y L+ L + G L++A + F D++VK + +Y M
Sbjct: 424 DKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVM 483
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREK 329
+ + G DE L ++ + D+ I + + ++ L +K E +K
Sbjct: 484 IHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRS-------------LFDKDENDK 530
Query: 330 AEAKARE 336
AE K RE
Sbjct: 531 AE-KLRE 536
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 133/287 (46%), Gaps = 9/287 (3%)
Query: 38 EKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNN 97
+L G + + + +L+KG +KG +A+ ++ V ++ V +++ LC
Sbjct: 118 HQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVA--MGFQLDQVGYGTLIHGLCKV 175
Query: 98 GKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
G+ AL L R+ P N+ ++ + DG C DA +++ +M SP
Sbjct: 176 GETRAALDLLRRVDGNLVQP-----NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISP 230
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
+ ++++ LI G L +A +L+ +M + + PD YT+ +L+D + ++ +G T F
Sbjct: 231 NVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVF 290
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDG 276
M+ G++PN+ Y L+ V +++AKS M ++ + D SY ++
Sbjct: 291 AMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKI 350
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
K+DE + + + I + G L K G+ +KL++
Sbjct: 351 KKVDEAMNLFKEMHHKHIIPDVVTYNSLIDG-LCKLGKISYALKLVD 396
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 9/239 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y LM G+ + + + + ++ GV D Y L+ G+
Sbjct: 293 MMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQR--GVNPDIQSYNILIDGFCKI 350
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EAM + E + + V NS++D LC GK ALKL D M + PP
Sbjct: 351 KKVDEAMNLFKEM--HHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPP--- 405
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + D C + AI + K+ + P+ ++ LID LCK G L +A
Sbjct: 406 --DIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHN 463
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
++ ++ KG N TY +++ D+ KM D+ P+ Y ++ L
Sbjct: 464 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 82/275 (29%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN--LGS--------- 126
SS K++ + +S+ NN +A LF R+ ++ P + N LGS
Sbjct: 35 SSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHT 94
Query: 127 -----------------------------------FNVMADGYCGQGRFKDA-------- 143
F + G C +G+ A
Sbjct: 95 VLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVV 154
Query: 144 --------------IEVFRKMGEYRCS-------------PDTLSFNNLIDQLCKNGMLA 176
I K+GE R + P+ + ++ +ID +CK+ +
Sbjct: 155 AMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVN 214
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A +LY EM KG++P+ TY L+ F V ++ D F KM+ ++P++ +N LV
Sbjct: 215 DAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILV 274
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ G + E K+ F +M+K+ +K + +Y +M
Sbjct: 275 DGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 309
>gi|255570274|ref|XP_002526097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534594|gb|EEF36291.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 167/336 (49%), Gaps = 11/336 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD +VY+ L+ F+ G+ D F EL E+ + DG V + M +F +
Sbjct: 242 MLNKGHGADSLVYNNLIRAFLELGNLDKANEFFSELNERC--LWYDGTVNATYMDWWFKQ 299
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++E ME Y + + +K+ N++L+ L GK + A L++ M + H PP
Sbjct: 300 GKDKEGMENYKSYL--DRKLKIPPPTGNALLEVLLRYGKKEAAQCLYEAMLDNHTPPTNQ 357
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-P---DTLSFNNLIDQLCKNGMLA 176
VN + ++M + +G+F D + FRK G S P D +NN+I + C+N MLA
Sbjct: 358 GVNSETISIMVNDCFKEGKFDDVVNTFRKAGTKPGSKPFQMDVAGYNNIIVKFCENEMLA 417
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EAE+ + E+ K ++PD +Y L+D+ +V R+DD KMV L + R+
Sbjct: 418 EAEKFFAELCSKSLSPDVTSYRTLIDSYLKVERIDDALRLLSKMVQENLWVVASYGTRVF 477
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+L++ G E M ++ K D + Y +++ L D G D +I+ ++ G+
Sbjct: 478 CELIKNGKAVECAQILTKMGERDPKPDPSVYDVVVRGLCDAGAFDTSKDILEQMM-RYGV 536
Query: 296 EFSEELQEFVKGELSKEGREEEV-VKLMEKKEREKA 330
L+EFV + G+ +E+ + L E + R +
Sbjct: 537 GVPPALKEFVVKAFTNAGQSQEIGIVLDENRWRNTS 572
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 70 YNEAVG------ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
YN+A+ E + + V+ N+++++ C+ G+ D L+++ + N P + +
Sbjct: 160 YNDAITLFKYFFEQHDIVPNVVSYNNLINSHCDEGRVDVGLEIYRHIIA--NAP--FSPS 215
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ + G GR ++A+++ R+M D+L +NNLI + G L +A E +
Sbjct: 216 PVTYRHLTKGLIDVGRVEEAVDLLREMLNKGHGADSLVYNNLIRAFLELGNLDKANEFFS 275
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E++++ + D MD F+ + +G ++ +D L+ N L+ L++ G
Sbjct: 276 ELNERCLWYDGTVNATYMDWWFKQGKDKEGMENYKSYLDRKLKIPPPTGNALLEVLLRYG 335
Query: 244 MLDEAKSFFDIMV 256
+ A+ ++ M+
Sbjct: 336 KKEAAQCLYEAML 348
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 153/291 (52%), Gaps = 12/291 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GF + V Y ++ + G + L +++E+ + D V Y ++ G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER--NIKLDAVKYSIIIDGLCKD 276
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKR 119
G + A +NE E K + N+++ CN G++D+ KL D +K + +P
Sbjct: 277 GSLDNAFNLFNEM--EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP--- 331
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ +F+V+ D + +G+ ++A ++ ++M + +P+T+++N+LID CK L EA
Sbjct: 332 ---NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
++ M KG +PD T+ +L++ + NR+DDG FR+M G+ N YN LV
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 240 VQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
Q G L+ AK F MV ++++ D SYK ++ L D G+L++ LEI G I
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 139/275 (50%), Gaps = 10/275 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KGF AD + Y+ L+ GF G D +L ++ ++ + + V + L+ + +
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR--KISPNVVTFSVLIDSFVKE 346
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + E + + + + NS++D C + +EA+++ D M ++ P
Sbjct: 347 GKLREADQLLKEMM--QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP--- 401
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +FN++ +GYC R D +E+FR+M +T+++N L+ C++G L A++
Sbjct: 402 --DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM + V PD +Y +L+D + ++ F K+ S + ++ +Y ++ +
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALS 274
+D+A F + +K +K+D +Y M+ L
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 134/255 (52%), Gaps = 12/255 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D + ++ L+ G+ + D LF E+ L GV+++ V Y +L++G+
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS--LRGVIANTVTYNTLVQGFCQS 451
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A + + E V V+ V+ +LD LC+NG+ ++AL++F +++ ++
Sbjct: 452 GKLEVAKKLFQEMVSRR--VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS-----KM 504
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++G + ++ G C + DA ++F + D ++N +I +LC+ L++A+
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ +M+++G PDE TY +L+ A + A +M SG +++ ++V ++
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTV-KMVINML 623
Query: 241 QVGMLDEAKSFFDIM 255
G LD KSF D++
Sbjct: 624 SSGELD--KSFLDML 636
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 119/241 (49%), Gaps = 7/241 (2%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V N++L+ LC + EAL+L DRM + P L + N + +G C G+ DA
Sbjct: 158 TVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP-----TLITLNTLVNGLCLNGKVSDA 212
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ + +M E P+ +++ +++ +CK+G A A EL +M ++ + D Y +++D
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE-AKSFFDIMVKKLKMD 262
+ +D+ F +M G + ++ YN L+G G D+ AK D++ +K+ +
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
++ ++ + GKL E +++ ++ G + + G KE R EE ++++
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG-FCKENRLEEAIQMV 391
Query: 323 E 323
+
Sbjct: 392 D 392
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 2/194 (1%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA+++FR M + R P + FN L + K L +M KG+ YT +++
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LK 260
+ ++ + K++ G P+ ++N L+ L + EA D MV+ K
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
+ ++ L GK+ + + ++ ++ + G + +E V + K G+ ++
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMV-ETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 321 LMEKKEREKAEAKA 334
L+ K E + A
Sbjct: 250 LLRKMEERNIKLDA 263
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 148/284 (52%), Gaps = 14/284 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK--LGGVVSDGVVYGSLMKGYFMKGM 62
GF D V Y ++ + G+S LF +++E+ VV +V SL K G
Sbjct: 234 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK----DGS 289
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
++A+ +NE E +K V +S++ LCN+GK+D+ K+ M + P
Sbjct: 290 FDDALSLFNEM--EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP----- 342
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ +F+ + D + +G+ +A E++ +M +PDT+++N+LID CK L EA +++
Sbjct: 343 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 402
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M KG PD TY +L+++ + RVDDG FR++ GL PN YN LV Q
Sbjct: 403 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 462
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
G L+ AK F MV + + +Y ++ L D G+L++ LEI
Sbjct: 463 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEI 506
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 156/326 (47%), Gaps = 53/326 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG AD V YS L+ G DG D ++ E+ + ++ D V + +L+ + +
Sbjct: 300 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR--NIIPDVVTFSALIDVFVKE 357
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA E YNE + + + NS++D C EA ++FD M ++ P
Sbjct: 358 GKLLEAKELYNEMI--TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP--- 412
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++++ + YC R D + +FR++ P+T+++N L+ C++G L A+E
Sbjct: 413 --DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 470
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA-C-----------FE---------------------- 206
L+ EM +GV P TYG+L+D C FE
Sbjct: 471 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 530
Query: 207 -VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK----- 260
++VDD + F + D G++P++ YN ++G L + G L EA D++ +K+K
Sbjct: 531 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA----DMLFRKMKEDGCT 586
Query: 261 MDDASYKFMMKALSDGGKLDEILEIV 286
DD +Y +++A G L +E++
Sbjct: 587 PDDFTYNILIRAHLGGSGLISSVELI 612
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 9/199 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + + + Y+ L+LGF + G + LF+E+ + GV V YG L+ G G
Sbjct: 443 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR--GVPPSVVTYGILLDGLCDNGEL 500
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A+E + + + S + + N ++ +CN K D+A LF + ++ P +
Sbjct: 501 NKALEIFEKM--QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP-----D 553
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++NVM G C +G +A +FRKM E C+PD ++N LI L + EL
Sbjct: 554 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 613
Query: 184 EMSDKGVNPDEYTYGLLMD 202
EM G + D T +++D
Sbjct: 614 EMKVCGFSADSSTIKMVID 632
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 16/206 (7%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+F+ + +G+C +GR +A+ + +M E + PD ++ + LI+ LC G ++EA L M
Sbjct: 171 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 230
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ G PDE TYG +++ + FRKM + ++ ++ Y+ ++ L + G
Sbjct: 231 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 290
Query: 246 DEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE----ILEIVGGILDDGGIEFSEE 300
D+A S F+ M +K +K D +Y ++ L + GK D+ + E++G + + FS
Sbjct: 291 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 350
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKE 326
+ FV KEG KL+E KE
Sbjct: 351 IDVFV-----KEG------KLLEAKE 365
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 108/211 (51%), Gaps = 6/211 (2%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ +++++ C G+ EA+ L DRM P +L + + + +G C +GR +A
Sbjct: 169 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP-----DLVTVSTLINGLCLKGRVSEA 223
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ + +M EY PD +++ ++++LCK+G A A +L+ +M ++ + Y +++D+
Sbjct: 224 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 283
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE-AKSFFDIMVKKLKMD 262
+ DD + F +M G++ ++ Y+ L+G L G D+ AK +++ + + D
Sbjct: 284 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 343
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++ ++ GKL E E+ ++ G
Sbjct: 344 VVTFSALIDVFVKEGKLLEAKELYNEMITRG 374
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 9/236 (3%)
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
K ++A+ LF+ M P + FN + ++ + + M D
Sbjct: 79 KVNDAIDLFESMIQSRPLPTPI-----DFNRLCSAVARTKQYDLVLGFCKGMELNGIEHD 133
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYF 217
+ +I+ C+ L A + G G PD T+ L++ C E RV +
Sbjct: 134 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE-GRVSEAVALV 192
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDG 276
+MV+ RP+L + L+ L G + EA D MV+ + D+ +Y ++ L
Sbjct: 193 DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 252
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
G L++ +++ I+ S V L K+G ++ + L + E + +A
Sbjct: 253 GNSALALDLFRK-MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 307
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 148/284 (52%), Gaps = 14/284 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK--LGGVVSDGVVYGSLMKGYFMKGM 62
GF D V Y ++ + G+S LF +++E+ VV +V SL K G
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK----DGS 260
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
++A+ +NE E +K V +S++ LCN+GK+D+ K+ M + P
Sbjct: 261 FDDALSLFNEM--EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP----- 313
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ +F+ + D + +G+ +A E++ +M +PDT+++N+LID CK L EA +++
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M KG PD TY +L+++ + RVDDG FR++ GL PN YN LV Q
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
G L+ AK F MV + + +Y ++ L D G+L++ LEI
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEI 477
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 156/326 (47%), Gaps = 53/326 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG AD V YS L+ G DG D ++ E+ + ++ D V + +L+ + +
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR--NIIPDVVTFSALIDVFVKE 328
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA E YNE + + + NS++D C EA ++FD M ++ P
Sbjct: 329 GKLLEAKELYNEMI--TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP--- 383
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++++ + YC R D + +FR++ P+T+++N L+ C++G L A+E
Sbjct: 384 --DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA-C-----------FE---------------------- 206
L+ EM +GV P TYG+L+D C FE
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 207 -VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK----- 260
++VDD + F + D G++P++ YN ++G L + G L EA D++ +K+K
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA----DMLFRKMKEDGCT 557
Query: 261 MDDASYKFMMKALSDGGKLDEILEIV 286
DD +Y +++A G L +E++
Sbjct: 558 PDDFTYNILIRAHLGGSGLISSVELI 583
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 9/199 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + + + Y+ L+LGF + G + LF+E+ + GV V YG L+ G G
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR--GVPPSVVTYGILLDGLCDNGEL 471
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A+E + + + S + + N ++ +CN K D+A LF + ++ P +
Sbjct: 472 NKALEIFEKM--QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP-----D 524
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++NVM G C +G +A +FRKM E C+PD ++N LI L + EL
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 184 EMSDKGVNPDEYTYGLLMD 202
EM G + D T +++D
Sbjct: 585 EMKVCGFSADSSTIKMVID 603
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 16/206 (7%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+F+ + +G+C +GR +A+ + +M E + PD ++ + LI+ LC G ++EA L M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ G PDE TYG +++ + FRKM + ++ ++ Y+ ++ L + G
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 246 DEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE----ILEIVGGILDDGGIEFSEE 300
D+A S F+ M +K +K D +Y ++ L + GK D+ + E++G + + FS
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKE 326
+ FV KEG KL+E KE
Sbjct: 322 IDVFV-----KEG------KLLEAKE 336
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 108/211 (51%), Gaps = 6/211 (2%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ +++++ C G+ EA+ L DRM P +L + + + +G C +GR +A
Sbjct: 140 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP-----DLVTVSTLINGLCLKGRVSEA 194
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ + +M EY PD +++ ++++LCK+G A A +L+ +M ++ + Y +++D+
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE-AKSFFDIMVKKLKMD 262
+ DD + F +M G++ ++ Y+ L+G L G D+ AK +++ + + D
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++ ++ GKL E E+ ++ G
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 9/236 (3%)
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
K ++A+ LF+ M P + FN + ++ + + M D
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPI-----DFNRLCSAVARTKQYDLVLGFCKGMELNGIEHD 104
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYF 217
+ +I+ C+ L A + G G PD T+ L++ C E RV +
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE-GRVSEAVALV 163
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDG 276
+MV+ RP+L + L+ L G + EA D MV+ + D+ +Y ++ L
Sbjct: 164 DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
G L++ +++ I+ S V L K+G ++ + L + E + +A
Sbjct: 224 GNSALALDLFRK-MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
>gi|255660960|gb|ACU25649.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 376
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 142/282 (50%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +KE G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKES--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D AL + + M P N+ +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKP-----NVHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA L E+ DKG++P
Sbjct: 173 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM +RV+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNHWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 132/281 (46%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++G D + E+ E+ GGV+ D Y +++ G + +
Sbjct: 89 GFVEDSITYGILVHGFCKNGYIDKSLHVL-EMAEQKGGVL-DAFAYSAMINGLCKEANLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ N+ + S K + N++++ L KF++A+++F M H P +
Sbjct: 147 RALSVLNDMI--KSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTII---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C F +A + +++ + P ++++ L+ LC + + A +L+ +
Sbjct: 201 -TYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + + M PNL +N L+ + G
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKCAPNLVSHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY +K L ++ D IL
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 9/218 (4%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S V AV N++L+ K + +L++ M +E N ++ SFN+M G
Sbjct: 19 SKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNIMMRGLFDN 72
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G+ + I ++ M E D++++ L+ CKNG + ++ + KG D + Y
Sbjct: 73 GKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAY 132
Query: 198 GLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIM 255
+++ C E N +D + M+ SG +PN+ VYN L+ LV ++A + F ++
Sbjct: 133 SAMINGLCKEAN-LDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMG 191
Query: 256 VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y ++ L E +V +LD G
Sbjct: 192 TMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY+ L+ G V + R+F E+ + Y +L+ G M EA
Sbjct: 166 VYNTLINGLVGASKFEDAIRVFREMGTM--HCSPTIITYNTLINGLCKNEMFGEAYNLVK 223
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E + + + + + ++ LC + + + AL+L++++ ++ P ++ N++
Sbjct: 224 ELL--DKGLDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKGFKP-----DVQMHNILI 276
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G C G+ + A+ ++ M ++C+P+ +S N L++ K+G + A ++ + G+
Sbjct: 277 HGLCSVGKMQLALSLYFDMNHWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLE 336
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
PD +Y + + NR+ D + V
Sbjct: 337 PDIISYNITLKGLCSCNRISDAILFLHDAV 366
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++K+ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAKRVYKKIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M +SG + Y LV + G +D++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD L ++ ++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSG 159
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++K+V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAKRVYKKIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAEQK 123
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 143/282 (50%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G+ D VF ++E +KE G V D YG L+ G+ G +++
Sbjct: 62 FNTMMRGLFNNGEVDEVFSIWELMKES--GFVEDSTTYGILVHGFCKNGYNNKSLHVLEI 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + + A A ++++ LC GK D+A+ + + M P N +N + +
Sbjct: 120 AKQEGGA--LDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKP-----NTQVYNALIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VF+++G CSP +++N LI+ LCK AEA +L EM +KG NP
Sbjct: 173 GLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY LL+ + ++V+ + +++ G +P++ ++N L+ L VG + A +
Sbjct: 233 SVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ + +Y +M+ GG L I IL +G
Sbjct: 293 FDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNG 334
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 128/277 (46%), Gaps = 10/277 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D Y L+ GF ++G ++ + E K++ G + D Y +++ G G +
Sbjct: 89 GFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGAL--DAFAYSAMISGLCKMGKLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ N + S K + N++++ L KF++A+++F + H P +
Sbjct: 147 KAVSVLNGMI--ESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRHCSP-----TI 199
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C RF +A ++ ++M E +P ++++ LI LC++ + A +L+ +
Sbjct: 200 VTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ KG PD + +L+ V + + + + M PNL YN L+ + G
Sbjct: 260 VISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLD 280
A + I+ L D SY +K L ++
Sbjct: 320 TRNALVIWARILRNGLLPDIISYNITLKGLCACNRIS 356
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 106/248 (42%), Gaps = 8/248 (3%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S + AV N++L+ G+ L++ M E + N+ SFN M G
Sbjct: 19 SKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSR------NVASFNTMMRGLFNN 72
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G + ++ M E D+ ++ L+ CKNG ++ + +G D + Y
Sbjct: 73 GEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAFAY 132
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMV 256
++ ++ ++D + M++SG +PN VYN L+ L+ ++A + F ++
Sbjct: 133 SAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGT 192
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
+ +Y ++ L G + E ++V +L+ G +KG L ++ + E
Sbjct: 193 RHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKG-LCQDHKVE 251
Query: 317 EVVKLMEK 324
++L +
Sbjct: 252 MALQLWNQ 259
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 13/231 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VY+ L+ G + + R+F+EL + V Y +L+ G
Sbjct: 155 MIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTR--HCSPTIVTYNTLINGLCKG 212
Query: 61 GMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
EA + E + G N SV + + ++ LC + K + AL+L++++ ++ P
Sbjct: 213 ERFAEAYDLVKEMLEKGWNPSV----ITYSLLIKGLCQDHKVEMALQLWNQVISKGFKP- 267
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ N++ G C G+ + A E++ M + C+P+ +++N L++ K G A
Sbjct: 268 ----DVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNA 323
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
++ + G+ PD +Y + + NR+ + V + P +
Sbjct: 324 LVIWARILRNGLLPDIISYNITLKGLCACNRISVAILFLNDAVTKNIVPTV 374
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G + + L +E+ EK G + Y L+KG E A++ +
Sbjct: 200 VTYNTLINGLCKGERFAEAYDLVKEMLEK--GWNPSVITYSLLIKGLCQDHKVEMALQLW 257
Query: 71 NEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
N+ + G V+M +N ++ LC+ GK + A +L+ M + + P NL ++N
Sbjct: 258 NQVISKGFKPDVQM----HNILIHGLCSVGKTEHASELYFDMNHWNCAP-----NLVTYN 308
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ +G+ G ++A+ ++ ++ PD +S+N + LC ++ A + K
Sbjct: 309 TLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAILFLNDAVTK 368
Query: 189 GVNPDEYT 196
+ P T
Sbjct: 369 NIVPTVIT 376
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + AE +Y EM++ ++PD Y +++ F+ R+ + + M G R N+
Sbjct: 1 CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSR-NV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGG---KLDEILEI 285
A +N ++ L G +DE S +++M + ++D+ +Y ++ G K +LEI
Sbjct: 60 ASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEI 119
Query: 286 V---GGILD 291
GG LD
Sbjct: 120 AKQEGGALD 128
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG 276
+++M +S + P+ VYN ++ + G + +++M ++ + AS+ MM+ L +
Sbjct: 13 YKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSRNVASFNTMMRGLFNN 72
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
G++DE+ I + + G +E S V G K G + + ++E ++E
Sbjct: 73 GEVDEVFSIWELMKESGFVEDSTTYGILVHG-FCKNGYNNKSLHVLEIAKQE 123
>gi|255660966|gb|ACU25652.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 376
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 143/282 (50%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +KE G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKES--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D AL + + M P N+ +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKP-----NVHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA L E+ DKG++P
Sbjct: 173 GLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + +++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALMIWARILRNG 334
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 130/281 (46%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++G D + E+ E+ GGV+ D Y +++ G + +
Sbjct: 89 GFVEDSITYGILVHGFCKNGYIDKSLHVL-EMAEQKGGVL-DAFAYSAMINGLCKEANLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ N + S K + N++++ L KF++A+++F M H P +
Sbjct: 147 RALSVLNGMI--KSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTII---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C F +A + +++ + P ++++ L+ LC + + A +L+ +
Sbjct: 201 -TYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ KG PD + +L+ V ++ + + M PNL +N L+ + G
Sbjct: 260 VISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY +K L ++ D IL
Sbjct: 320 IRNALMIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 11/226 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y E V S V AV N++L+ K + +L++ M +E N ++ SFN+
Sbjct: 13 YKEIV--ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNI 64
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G G+ + I ++ M E D++++ L+ CKNG + ++ + KG
Sbjct: 65 MMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124
Query: 190 VNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D + Y +++ C E N +D + M+ SG +PN+ VYN L+ L ++A
Sbjct: 125 GVLDAFAYSAMINGLCKEAN-LDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDA 183
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F ++ +Y ++ L E +V +LD G
Sbjct: 184 IRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ Y+ L+ G ++ + L +EL +K G+ + Y LMKG + E A++ +
Sbjct: 200 ITYNTLINGLCKNEMFGEAYNLVKELLDK--GLDPGVITYSMLMKGLCLDHKVERALQLW 257
Query: 71 NEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
N+ + G V+M +N ++ LC+ GK AL L+ M P NL S N
Sbjct: 258 NQVISKGFKPDVQM----HNILIHGLCSVGKMQLALSLYFDMNRWKCAP-----NLVSHN 308
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ +G+ G ++A+ ++ ++ PD +S+N + LC +++A + K
Sbjct: 309 TLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTK 368
Query: 189 GVNPDEYT 196
+ P + T
Sbjct: 369 KIVPTKIT 376
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M +SG + Y LV + G +D++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD L ++ G++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSG 159
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAEQK 123
>gi|255660974|gb|ACU25656.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 372
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 142/282 (50%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +KE G V D + YG L+ G+ G ++++
Sbjct: 61 FNIMMRGLFDNGKVDEVISIWELMKES--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 118
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D A+ + + M P N+ +N + +
Sbjct: 119 A--EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP-----NVHVYNTLIN 171
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA L E+ DKG++P
Sbjct: 172 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDP 231
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM +RV+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 232 GVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 291
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 292 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 333
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 130/281 (46%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++G D + E+ E+ GGV+ D Y +++ G + +
Sbjct: 88 GFVEDSITYGILVHGFCKNGYIDKSLHVL-EMAEQKGGVL-DAFAYSAMINGLCKEANLD 145
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ N + S K + N++++ L KF++A+++F M H P +
Sbjct: 146 RAVSVLNGMI--KSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTII---- 199
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C F +A + +++ + P ++++ L+ LC + + A L+ +
Sbjct: 200 -TYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQ 258
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + + M PNL +N L+ + G
Sbjct: 259 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 318
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY ++ L ++ D IL
Sbjct: 319 IRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAIL 359
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 11/226 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y E V S V AV N++L+ K + +L++ M +E N ++ SFN+
Sbjct: 12 YKEIV--ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNI 63
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G G+ + I ++ M E D++++ L+ CKNG + ++ + KG
Sbjct: 64 MMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 123
Query: 190 VNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D + Y +++ C E N +D + M+ SG +PN+ VYN L+ LV ++A
Sbjct: 124 GVLDAFAYSAMINGLCKEAN-LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDA 182
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F ++ +Y ++ L E +V +LD G
Sbjct: 183 IRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKG 228
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
G A V++++ E + SPD + +N +++ + + + EL+ M +G N +
Sbjct: 2 SGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSS 60
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
+ ++M F+ +VD+ + + M +SG + Y LV + G +D++ ++
Sbjct: 61 FNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAE 120
Query: 257 KKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD + ++ G++ G
Sbjct: 121 QKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSG 158
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 5 IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 64
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + + G +E S V G K G ++ + ++E E++
Sbjct: 65 MRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAEQK 122
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 136/284 (47%), Gaps = 10/284 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V YS ++ GF R D ++LF ++ E G + + V Y +L+ G G+ +
Sbjct: 72 GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN--GCMPNLVTYNTLLSGLCRNGLMD 129
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA E +E ++ + ++++ LC GK D ALK+F+ N PP +A
Sbjct: 130 EAYELLDEM--RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA--- 184
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G C GR +A ++F KM E C PD ++F L+D LCK L EA+++
Sbjct: 185 --YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M D+ P+ TY L+D + +V D F++M+ G+ PN+ YN L+
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302
Query: 245 LDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVG 287
+D A + M + D +Y ++ L G+ E + G
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFG 346
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 139/281 (49%), Gaps = 10/281 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + V Y+ L+ G R+G D + L +E++E+ G+ D Y +LM G
Sbjct: 103 MVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRER--GLQPDKFSYDTLMAGLCKT 160
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A++ + + N VA ++++ LC G+ DEA KLF++M+ P
Sbjct: 161 GKIDMALKVFED--NSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEP--- 215
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +F + DG C R ++A +V M + C+P+ +++++LID LCK G + +A+E
Sbjct: 216 --DVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQE 273
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M +G+ P+ TY L+ N VD +M +G P++ YN L+ L
Sbjct: 274 VFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC 333
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLD 280
+ G EA F D+ K D +Y ++ ++D
Sbjct: 334 KTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 374
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 160/368 (43%), Gaps = 17/368 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G + V Y+ L+ GF D L EE+ G + D + Y +L+ G
Sbjct: 278 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT--GCLPDIITYNTLIDGLCKT 335
Query: 61 GMEEEAMECYNEAVGENSS--VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G EA N G+ + + + ++ C + D A LFD M + P
Sbjct: 336 GRAPEA----NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLP- 390
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ +F+ + +GYC G DA + +M CSPD ++ +L+D CK G + EA
Sbjct: 391 ----DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEA 446
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ M+ +G P+ TY L+DA + +MV +G++PN+ Y L+G
Sbjct: 447 RRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGG 506
Query: 239 LVQVGMLDEAKSFFDIMVK--KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
G L+EA+ + + + K D +Y+ MM L G++ LE++ I G
Sbjct: 507 FCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPP 566
Query: 297 FSEELQEFVKGELSKE--GREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASL 354
+ ++G + G+ EV++ M + + A+A EA E A+ +L
Sbjct: 567 RHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANAL 626
Query: 355 IPSKFGDK 362
G+K
Sbjct: 627 ADELLGNK 634
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 6/200 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +++ C K A L MK LA N+ +++ + G+C Q + A ++F
Sbjct: 46 NVLINGFCKVHKVHRAYLLLKEMKESG-----LAPNVVTYSTVIHGFCRQTKVDTAYKLF 100
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
R+M E C P+ +++N L+ LC+NG++ EA EL EM ++G+ PD+++Y LM +
Sbjct: 101 RQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKT 160
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASY 266
++D F + P++ Y+ L+ L + G LDEA F+ M + + D ++
Sbjct: 161 GKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTF 220
Query: 267 KFMMKALSDGGKLDEILEIV 286
+M L G +L E +++
Sbjct: 221 TALMDGLCKGDRLQEAQQVL 240
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 10/215 (4%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ ++ +M DG C R +A F KM + P+ ++N LI+ CK + A L
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM + G+ P+ TY ++ +VD FR+MV++G PNL YN L+ L +
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV----GGILDDGGIEF 297
G++DEA D M ++ L+ D SY +M L GK+D L++ G + +
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
S + G L K GR +E KL EK E
Sbjct: 186 S----TLIAG-LCKTGRLDEACKLFEKMRENSCEP 215
>gi|255660972|gb|ACU25655.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 376
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 142/282 (50%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +KE G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKES--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D A+ + + M P N+ +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP-----NVHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA L E+ DKG++P
Sbjct: 173 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM +RV+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 130/281 (46%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++G D + E+ E+ GGV+ D Y +++ G + +
Sbjct: 89 GFVEDSITYGILVHGFCKNGYIDKSLHVL-EMAEQKGGVL-DAFAYSAMINGLCKEANLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ N + S K + N++++ L KF++A+++F M H P +
Sbjct: 147 RAVSVLNGMI--KSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTII---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C F +A + +++ + P ++++ L+ LC + + A L+ +
Sbjct: 201 -TYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + + M PNL +N L+ + G
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY ++ L ++ D IL
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAIL 360
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 11/226 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y E V S V AV N++L+ K + +L++ M +E N ++ SFN+
Sbjct: 13 YKEIV--ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNI 64
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G G+ + I ++ M E D++++ L+ CKNG + ++ + KG
Sbjct: 65 MMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124
Query: 190 VNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D + Y +++ C E N +D + M+ SG +PN+ VYN L+ LV ++A
Sbjct: 125 GVLDAFAYSAMINGLCKEAN-LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDA 183
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F ++ +Y ++ L E +V +LD G
Sbjct: 184 IRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKG 229
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M +SG + Y LV + G +D++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD + ++ G++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSG 159
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAEQK 123
>gi|255660968|gb|ACU25653.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 376
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 146/283 (51%), Gaps = 12/283 (4%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +KE G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKES--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D A+ + + M P N+ +N + +
Sbjct: 120 A--EQKGGVLGAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP-----NVHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ CKN M EA L E+ DKG++P
Sbjct: 173 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDP 232
Query: 193 DEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS- 250
TY +LM+ CF+ ++V+ + ++ G +P++ ++N L+ L VG ++ A S
Sbjct: 233 GVITYSMLMEGLCFD-HKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMELALSL 291
Query: 251 FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+FD+ K + S+ +M+ G + L I IL +G
Sbjct: 292 YFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 133/281 (47%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++G D + E+ E+ GGV+ Y +++ G + +
Sbjct: 89 GFVEDSITYGILVHGFCKNGYIDKSLHVL-EMAEQKGGVLG-AFAYSAMINGLCKEANLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ N + S K + N++++ L KF++A+++F M H P +
Sbjct: 147 RAVSVLNGMI--KSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTII---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G+C F +A + +++ + P ++++ L++ LC + + A +L+ +
Sbjct: 201 -TYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V +++ + + M PNL +N L+ + G
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMELALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY ++ L ++ D IL
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAIL 360
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY+ L+ G V + R+F E+ + Y +L+ G+ M EA
Sbjct: 166 VYNTLINGLVGASKFEDAIRVFREMGTM--HCSPTIITYNTLINGFCKNKMFGEAYNLVK 223
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E + + + + + +++ LC + K + AL+L++++ ++ P ++ N++
Sbjct: 224 ELL--DKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKP-----DVQMHNILI 276
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G C G+ + A+ ++ M ++C+P+ +S N L++ K+G + A ++ + G+
Sbjct: 277 HGLCSVGKMELALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLE 336
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
PD +Y + ++ NR+ D + V
Sbjct: 337 PDIISYNITLEGLCSCNRISDAILFLHDAV 366
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 11/226 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y E V S V AV N++L+ K + +L++ M +E N ++ SFN+
Sbjct: 13 YKEIV--ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNI 64
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G G+ + I ++ M E D++++ L+ CKNG + ++ + KG
Sbjct: 65 MMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124
Query: 190 VNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+ Y +++ C E N +D + M+ SG +PN+ VYN L+ LV ++A
Sbjct: 125 GVLGAFAYSAMINGLCKEAN-LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDA 183
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F ++ +Y ++ E +V +LD G
Sbjct: 184 IRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKG 229
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M +SG + Y LV + G +D++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + A +Y M+ L LD + ++ G++ G
Sbjct: 120 AEQKGGVLGAFAYSAMINGLCKEANLDRAVSVLNGMIKSG 159
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + AE +Y E+ + V+PD Y +++ F V ++ D + M G R ++
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR-SV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGG 288
+ +N ++ L G +DE S +++M + ++D+ +Y ++ G +D+ L ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 289 ILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
GG+ + + G L KE + V ++
Sbjct: 120 AEQKGGVLGAFAYSAMING-LCKEANLDRAVSVL 152
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAEQK 123
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 136/284 (47%), Gaps = 10/284 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V YS ++ GF R D ++LF ++ E G + + V Y +L+ G G+ +
Sbjct: 191 GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN--GCMPNLVTYNTLLSGLCRNGLMD 248
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA E +E ++ + ++++ LC GK D ALK+F+ N PP +A
Sbjct: 249 EAYELLDEM--RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA--- 303
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G C GR +A ++F KM E C PD ++F L+D LCK L EA+++
Sbjct: 304 --YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 361
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M D+ P+ TY L+D + +V D F++M+ G+ PN+ YN L+
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 421
Query: 245 LDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVG 287
+D A + M + D +Y ++ L G+ E + G
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFG 465
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 139/281 (49%), Gaps = 10/281 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + V Y+ L+ G R+G D + L +E++E+ G+ D Y +LM G
Sbjct: 222 MVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRER--GLQPDKFSYDTLMAGLCKT 279
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A++ + + N VA ++++ LC G+ DEA KLF++M+ P
Sbjct: 280 GKIDMALKVFED--NSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEP--- 334
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +F + DG C R ++A +V M + C+P+ +++++LID LCK G + +A+E
Sbjct: 335 --DVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQE 392
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M +G+ P+ TY L+ N VD +M +G P++ YN L+ L
Sbjct: 393 VFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC 452
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLD 280
+ G EA F D+ K D +Y ++ ++D
Sbjct: 453 KTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 493
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 160/368 (43%), Gaps = 17/368 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G + V Y+ L+ GF D L EE+ G + D + Y +L+ G
Sbjct: 397 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT--GCLPDIITYNTLIDGLCKT 454
Query: 61 GMEEEAMECYNEAVGENSS--VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G EA N G+ + + + ++ C + D A LFD M + P
Sbjct: 455 GRAPEA----NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLP- 509
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ +F+ + +GYC G DA + +M CSPD ++ +L+D CK G + EA
Sbjct: 510 ----DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEA 565
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ M+ +G P+ TY L+DA + +MV +G++PN+ Y L+G
Sbjct: 566 RRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGG 625
Query: 239 LVQVGMLDEAKSFFDIMVK--KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
G L+EA+ + + + K D +Y+ MM L G++ LE++ I G
Sbjct: 626 FCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPP 685
Query: 297 FSEELQEFVKGELSKE--GREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASL 354
+ ++G + G+ EV++ M + + A+A EA E A+ +L
Sbjct: 686 RHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANAL 745
Query: 355 IPSKFGDK 362
G+K
Sbjct: 746 ADELLGNK 753
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 141/316 (44%), Gaps = 38/316 (12%)
Query: 2 FVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
+ G + Y+ ++ G + GD D L EE++E G V D +Y ++
Sbjct: 51 WPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRE--SGPVPDAAIYNFVIHALCKAR 108
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR-- 119
+A++ + E + + + + +D LC + EA F +MK + P
Sbjct: 109 NTAKALDYFRSMECEKNVITWTIM-----IDGLCKANRLPEATTYFAKMKKKGTVPNEWT 163
Query: 120 ----------------------------LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
LA N+ +++ + G+C Q + A ++FR+M
Sbjct: 164 YNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV 223
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
E C P+ +++N L+ LC+NG++ EA EL EM ++G+ PD+++Y LM + ++D
Sbjct: 224 ENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKID 283
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMM 270
F + P++ Y+ L+ L + G LDEA F+ M + + D ++ +M
Sbjct: 284 MALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALM 343
Query: 271 KALSDGGKLDEILEIV 286
L G +L E +++
Sbjct: 344 DGLCKGDRLQEAQQVL 359
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 121/317 (38%), Gaps = 82/317 (25%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N + +AL + DE + ++ P + N+ ++ V+ G C G A E+
Sbjct: 28 NRLFEALLRARRIDETCHIL-----KNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 148 RKMGEYRCSPDTLSFNNLI--------------------------------DQLCKNGML 175
+M E PD +N +I D LCK L
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRL 142
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN--------------------------- 208
EA + +M KG P+E+TY +L++ +V+
Sbjct: 143 PEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTV 202
Query: 209 --------RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-L 259
+VD FR+MV++G PNL YN L+ L + G++DEA D M ++ L
Sbjct: 203 IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 262
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIV----GGILDDGGIEFSEELQEFVKGELSKEGRE 315
+ D SY +M L GK+D L++ G + +S + G L K GR
Sbjct: 263 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS----TLIAG-LCKAGRL 317
Query: 316 EEVVKLMEKKEREKAEA 332
+E KL EK E
Sbjct: 318 DEACKLFEKMRENSCEP 334
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 100/261 (38%), Gaps = 39/261 (14%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
D AL+ F + N+ ++N + + R + + + +P+
Sbjct: 5 DAALRFFHWASKQQG----FDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVF 60
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE-------------------------- 194
++ +I LCK+G L +A EL EM + G PD
Sbjct: 61 TYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM 120
Query: 195 ------YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
T+ +++D + NR+ + TYF KM G PN YN L+ +V + A
Sbjct: 121 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 180
Query: 249 KSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
M + L + +Y ++ K+D ++ ++++G + + G
Sbjct: 181 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 240
Query: 308 ELSKEGREEEVVKLM-EKKER 327
L + G +E +L+ E +ER
Sbjct: 241 -LCRNGLMDEAYELLDEMRER 260
>gi|255660956|gb|ACU25647.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 376
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 142/282 (50%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +KE G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKES--GFVEDSITYGILVHGFCKNGYSDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D AL + + M P N+ +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKP-----NVHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA L E+ DKG++P
Sbjct: 173 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 132/281 (46%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++G SD + E+ E+ GGV+ D Y +++ G + +
Sbjct: 89 GFVEDSITYGILVHGFCKNGYSDKSLHVL-EMAEQKGGVL-DAFAYSAMINGLCKEANLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ N + S K + N++++ L KF++A+++F M H P +
Sbjct: 147 RALYVLNGMI--KSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTII---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C F +A + +++ + P ++++ L+ LC + + A +L+ +
Sbjct: 201 -TYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + + M PNL +N L+ + G
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY +K L ++ D IL
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 11/226 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y E V S V AV N++L+ K + +L++ M +E N ++ SFN+
Sbjct: 13 YKEIV--ESKVSPDAVVCNAMLNGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNI 64
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G G+ + I ++ M E D++++ L+ CKNG ++ + KG
Sbjct: 65 MMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYSDKSLHVLEMAEQKG 124
Query: 190 VNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D + Y +++ C E N +D M+ SG +PN+ VYN L+ LV ++A
Sbjct: 125 GVLDAFAYSAMINGLCKEAN-LDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDA 183
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F ++ +Y ++ L E +V +LD G
Sbjct: 184 IRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVCNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M +SG + Y LV + G D++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYSDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD L ++ G++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSG 159
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ V N ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKEIVESKVSPDAVVCNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHG-FCKNGYSDKSLHVLEMAEQK 123
>gi|255660962|gb|ACU25650.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 376
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 142/282 (50%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +KE G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKES--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D AL + + M P N+ +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKP-----NVHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA L E+ DKG++P
Sbjct: 173 GLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 131/281 (46%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++G D + E+ E+ GGV+ D Y +++ G + +
Sbjct: 89 GFVEDSITYGILVHGFCKNGYIDKSLHVL-EMAEQKGGVL-DAFAYSAMINGLCKEANLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ N + S K + N++++ L KF++A+++F M H P +
Sbjct: 147 RALSVLNGMI--KSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTII---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C F +A + +++ + P ++++ L+ LC + + A +L+ +
Sbjct: 201 -TYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + + M PNL +N L+ + G
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKIQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY +K L ++ D IL
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 11/226 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y E V S V AV N++L+ K + +L++ M +E N ++ SFN+
Sbjct: 13 YKEIV--ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNI 64
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G G+ + I ++ M E D++++ L+ CKNG + ++ + KG
Sbjct: 65 MMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124
Query: 190 VNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D + Y +++ C E N +D + M+ SG +PN+ VYN L+ L ++A
Sbjct: 125 GVLDAFAYSAMINGLCKEAN-LDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDA 183
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F ++ +Y ++ L E +V +LD G
Sbjct: 184 IRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M +SG + Y LV + G +D++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD L ++ G++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSG 159
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAEQK 123
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 164/334 (49%), Gaps = 23/334 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K D Y+ L+ GF G LF ++ K ++ D + L+ G+ G
Sbjct: 362 KRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSK--NIIPDVYTFSILVDGFCKDGNI 419
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA A+ S+K V +S++D C + ++A +F+ M + + + N
Sbjct: 420 KEAKNVL--AMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSH-----RGVTAN 472
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S+N+M +G+C +A+++F++M + PD +++++LID LCK+G ++ A EL
Sbjct: 473 VQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVD 532
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +G PD TY ++DA + + VD T K+ G+RP++ Y LV L Q G
Sbjct: 533 EMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSG 592
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L++A+ F D++VK +D +Y M++ D G DE L ++ + ++G I
Sbjct: 593 KLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIP------ 646
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAEAKARE 336
+ E ++ L EK E + AE RE
Sbjct: 647 -------DAKTYEIIILSLFEKDENDMAEKLLRE 673
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 136/298 (45%), Gaps = 31/298 (10%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D + + +KG+ +KG +A+ +++ + + V+ ++++ LC G+
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIA--MGFHLDQVSYGTLINGLCKVGETK 315
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
AL+L R N K + ++ +N + DG C DA +++ + R PD +
Sbjct: 316 AALELLRR-----NDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFT 370
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+N LI C G L +A +L+ +M+ K + PD YT+ +L+D + + + M+
Sbjct: 371 YNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMM 430
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
++P++ Y+ L+ V +++A+S F+ M + + + SY M+ +D
Sbjct: 431 KQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVD 490
Query: 281 EILE-------------------IVGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
E ++ ++ G+ G I ++ EL + E+ G++ +++
Sbjct: 491 EAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVD----EMHYRGQQPDII 544
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G A+ Y+ ++ GF + D +LF+E+ K + D + Y SL+ G G
Sbjct: 467 RGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHK--QIFPDVITYSSLIDGLCKSGRI 524
Query: 64 EEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
A+E +E G+ + + NS+LDALC D+A+ L ++K + P
Sbjct: 525 SYALELVDEMHYRGQQPDI----ITYNSILDALCKKHHVDKAITLLTKLKGQGIRP---- 576
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ ++ ++ G C G+ +DA +VF + + D ++ +I C G+ EA L
Sbjct: 577 -DMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALAL 635
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+M + G PD TY +++ + FE + D R+M+ GL
Sbjct: 636 LSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679
>gi|255660958|gb|ACU25648.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 348
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 142/282 (50%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +KE G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKES--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D AL + + M P N+ +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKP-----NVHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA L E+ DKG++P
Sbjct: 173 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 125/268 (46%), Gaps = 10/268 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++G D + E+ E+ GGV+ D Y +++ G + +
Sbjct: 89 GFVEDSITYGILVHGFCKNGYIDKSLHVL-EMAEQKGGVL-DAFAYSAMINGLCKEANLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ N + S K + N++++ L KF++A+++F M H P +
Sbjct: 147 RALYVLNGMI--KSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTII---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C F +A + +++ + P ++++ L+ LC + + A +L+ +
Sbjct: 201 -TYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + + M PNL +N L+ + G
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMK 271
+ A + I+ L+ D SY +K
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLK 347
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 11/226 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y E V S V AV N++L+ K + +L++ M +E N ++ SFN+
Sbjct: 13 YKEIV--ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNI 64
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G G+ + I ++ M E D++++ L+ CKNG + ++ + KG
Sbjct: 65 MMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124
Query: 190 VNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D + Y +++ C E N +D M+ SG +PN+ VYN L+ LV ++A
Sbjct: 125 GVLDAFAYSAMINGLCKEAN-LDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDA 183
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F ++ +Y ++ L E +V +LD G
Sbjct: 184 IRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M +SG + Y LV + G +D++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD L ++ G++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSG 159
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAEQK 123
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 154/324 (47%), Gaps = 11/324 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ ++ +D + L E+ ++ G+ D V Y +++ G+ G
Sbjct: 226 KGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDR--GIPPDVVTYSTILHGFCSLGHL 283
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA +NE VG N V + V ++D LC G EA +F+ M + P N
Sbjct: 284 NEATILFNEMVGRN--VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEP-----N 336
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + DGYC + +A +V M + C+P S+N LI+ CK L EA+ L
Sbjct: 337 AYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLV 396
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EMS+K + PD TY LM +V R + F++M SGL P+L Y+ L+ L + G
Sbjct: 397 EMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHG 456
Query: 244 MLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDEA M + K++ D Y +++ + GKL+ E+ + DG
Sbjct: 457 HLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYT 516
Query: 303 EFVKGELSKEGREEEVVKLMEKKE 326
+KG L KEG +E +L K E
Sbjct: 517 IMIKG-LLKEGLSDEAYELFRKME 539
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 11/333 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF G D + ++ L+ G +G+ LF E+ + G D + Y +++ G
Sbjct: 153 MFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR--GHQPDVISYSTVINGLCKS 210
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A++ + E K + VA +++D+LC + ++A+ L M + PP
Sbjct: 211 GNTSMALQLLRKM--EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPP--- 265
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + G+C G +A +F +M P+T++F L+D LCK GM++EA
Sbjct: 266 --DVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARC 323
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M+ KG P+ YTY LMD N++D+ MVD G P + YN L+
Sbjct: 324 VFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYC 383
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ LDEAKS ++ K+L D +Y +M+ L G+ E L + + G +
Sbjct: 384 KRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLM 443
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
+ G L K G +E +KL++ + K E
Sbjct: 444 TYSTLLDG-LCKHGHLDEALKLLKSMQESKIEP 475
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 153/310 (49%), Gaps = 10/310 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V YS ++ GF G + LF E+ + V+ + V + L+ G +GM
Sbjct: 261 RGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR--NVMPNTVTFTILVDGLCKEGMV 318
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA C EA+ + + + +A N+++D C N + DEA K+ D M ++ P
Sbjct: 319 SEA-RCVFEAMTKKGA-EPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV----- 371
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S+N++ +GYC + R +A + +M E +PDT++++ L+ LC+ G EA L+
Sbjct: 372 VHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFK 431
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G+ PD TY L+D + +D+ + M +S + P++ +YN L+ + G
Sbjct: 432 EMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAG 491
Query: 244 MLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L+ AK F + ++ +Y M+K L G DE E+ + DDG + S
Sbjct: 492 KLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYN 551
Query: 303 EFVKGELSKE 312
++G L +
Sbjct: 552 VIIQGFLQNQ 561
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 10/222 (4%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ S N++ + C AI V KM + PD ++FN LI+ C G + EA L+
Sbjct: 126 NVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLF 185
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM +G PD +Y +++ + RKM + G +PNL Y ++ L +
Sbjct: 186 NEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKD 245
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE--IL--EIVGGILDDGGIEF 297
++++A MV + + D +Y ++ G L+E IL E+VG + + F
Sbjct: 246 TLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTF 305
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+ V G L KEG E + E ++ AE A A
Sbjct: 306 T----ILVDG-LCKEGMVSEARCVFEAMTKKGAEPNAYTYNA 342
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 36/225 (16%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
PVV+SY +L G+ + D L E+ EK + D V Y +LM+G G +EA+
Sbjct: 370 PVVHSYNILINGYCKRRRLDEAKSLLVEMSEK--ELTPDTVTYSTLMQGLCQVGRPQEAL 427
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL--- 124
+ E +S + + +++LD LC +G DEALKL M+ P + N+
Sbjct: 428 NLFKEMC--SSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIE 485
Query: 125 ---------------------------GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
++ +M G +G +A E+FRKM + P
Sbjct: 486 GMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLP 545
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
++ S+N +I +N + A L EM K + D T+ +L+D
Sbjct: 546 NSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590
>gi|255660970|gb|ACU25654.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 350
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 145/283 (51%), Gaps = 12/283 (4%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +KE G V D + YG L+ G+ G ++++
Sbjct: 36 FNTMMRGLFDNGKVDEVISIWELMKES--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 93
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D A+ + + M P N+ +N + +
Sbjct: 94 A--EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP-----NVHVYNTLIN 146
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ CKN M EA L E+ DKG++P
Sbjct: 147 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDP 206
Query: 193 DEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS- 250
TY +LM+ CF+ ++V+ + ++ G +P++ ++N L+ L VG + A S
Sbjct: 207 GVITYSMLMEGLCFD-HKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSL 265
Query: 251 FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+FD+ K + S+ +M+ G + L I IL +G
Sbjct: 266 YFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 308
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 133/281 (47%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++G D + E+ E+ GGV+ D Y +++ G + +
Sbjct: 63 GFVEDSITYGILVHGFCKNGYIDKSLHVL-EMAEQKGGVL-DAFAYSAMINGLCKEANLD 120
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ N + S K + N++++ L KF++A+++F M H P +
Sbjct: 121 RAVSVLNGMI--KSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTII---- 174
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G+C F +A + +++ + P ++++ L++ LC + + A +L+ +
Sbjct: 175 -TYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQ 233
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + + M PNL +N L+ + G
Sbjct: 234 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 293
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY ++ L ++ D IL
Sbjct: 294 IRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAIL 334
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY+ L+ G V + R+F E+ + Y +L+ G+ M EA
Sbjct: 140 VYNTLINGLVGASKFEDAIRVFREMGTM--HCSPTIITYNTLINGFCKNKMFGEAYNLVK 197
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E + + + + + +++ LC + K + AL+L++++ ++ P ++ N++
Sbjct: 198 ELL--DKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKP-----DVQMHNILI 250
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G C G+ + A+ ++ M ++C+P+ +S N L++ K+G + A ++ + G+
Sbjct: 251 HGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLE 310
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
PD +Y + ++ NR+ D + V
Sbjct: 311 PDIISYNITLEGLCSCNRISDAILFLHDAV 340
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 9/208 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N++L K + +L++ M +E N ++ SFN M G G+ + I ++
Sbjct: 3 NAMLKGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNTMMRGLFDNGKVDEVISIW 56
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFE 206
M E D++++ L+ CKNG + ++ + KG D + Y +++ C E
Sbjct: 57 ELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKE 116
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDAS 265
N +D + M+ SG +PN+ VYN L+ LV ++A + F ++ +
Sbjct: 117 AN-LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIIT 175
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDG 293
Y ++ E +V +LD G
Sbjct: 176 YNTLINGFCKNKMFGEAYNLVKELLDKG 203
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 153/322 (47%), Gaps = 15/322 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V D + Y L+ R +D +L ELK G D V Y L+ G +
Sbjct: 663 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF--GWDPDTVTYNILVDGLWKS 720
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A+ E VG+ + V N+++D+LC G +EA +L M + + +
Sbjct: 721 GQTEQAITVLEEMVGKGHHPDV--VTYNTLIDSLCKAGDLEEARRLHGDMSSRVS--RCC 776
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS--PDTLSFNNLIDQLCKNGMLAEA 178
N+ +++V+ +G C GR +A E+ ++M C P+ +++N+ +D LCK M+AEA
Sbjct: 777 VPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEA 836
Query: 179 EELYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EL + D V+PD T+ L+D + + D+ F M+ G PN+ YN L+
Sbjct: 837 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLM 896
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG- 294
L + ++ A + + MV K + D +Y ++ A +DE LE++ G+ G
Sbjct: 897 NGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCT 956
Query: 295 ---IEFSEELQEFVKGELSKEG 313
+ F+ + K + S E
Sbjct: 957 PNVVTFNSIIDGLCKSDQSGEA 978
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 138/286 (48%), Gaps = 15/286 (5%)
Query: 7 VADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
+ DP Y++ + G + GD +++ + E +V D V + L+ G G E
Sbjct: 527 MPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLEL--ELVPDKVTFNILIAGACKAGNFE 584
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + E V +N ++ + +++D LC G+ + A + D M N PP N+
Sbjct: 585 QASALFEEMVAKN--LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP-----NV 637
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C GR ++A + +M C PD++++ +L+ LC+ +A +L E
Sbjct: 638 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 697
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ G +PD TY +L+D ++ + + T +MV G P++ YN L+ L + G
Sbjct: 698 LKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGD 757
Query: 245 LDEAKSFFDIMVKKLKM----DDASYKFMMKALSDGGKLDEILEIV 286
L+EA+ M ++ + +Y ++ L G++DE E++
Sbjct: 758 LEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELI 803
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 167/390 (42%), Gaps = 70/390 (17%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + V + V YS L+ G + G D L +E+ K V+ + + Y S + G +
Sbjct: 277 MSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ 336
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M EA E + V V ++++D LC G+ DEA +FD M P +
Sbjct: 337 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI 396
Query: 121 AVN------------------------------LGSFNVMADGYCGQGRFKDAIEVFRKM 150
N + +++V+ D +C R +A+E+ M
Sbjct: 397 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 456
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK-GVNPDEYTYGLLMDACFEVNR 209
C+P+ ++FN++ID LCK+ EA +++ +M+ K G+ PD+ TY L+D F R
Sbjct: 457 ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGR 516
Query: 210 ----------VDDGATY---------------------FRKMVDSGLRPNLAVYNRLVGK 238
+ D TY + +M++ L P+ +N L+
Sbjct: 517 AGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAG 576
Query: 239 LVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLD---EILEIVGGILDDGG 294
+ G ++A + F+ MV K L+ D ++ ++ L G+++ +IL+++G + G
Sbjct: 577 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL----G 632
Query: 295 IEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ + + L K GR EE + +E+
Sbjct: 633 VPPNVVTYNALVHGLCKSGRIEEACQFLEE 662
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 130/279 (46%), Gaps = 11/279 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y+ L+ + GD + RL ++ + V + V Y L+ G G
Sbjct: 245 RGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR--SCVPNVVTYSVLINGLCKVGRI 302
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA E E ++ V + + NS LD LC EA +L M++ + R++ +
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL---MRSLRDGSLRVSPD 359
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+F+ + DG C G+ +A VF M G Y P+ +++N L++ LCK + A +
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGY--VPNVITYNALVNGLCKADKMERAHAM 417
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M DKGV PD TY +L+DA + +RVD+ M G PN+ +N ++ L +
Sbjct: 418 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 477
Query: 242 VGMLDEAKSFFDIMVKK--LKMDDASYKFMMKALSDGGK 278
EA FD M K L D +Y ++ L G+
Sbjct: 478 SDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGR 516
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 130/278 (46%), Gaps = 10/278 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFM 59
M KG D V Y+ L+ + GD + RL ++ ++ V + V Y L+ G
Sbjct: 733 MVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCK 792
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G +EA E E + ++ V + + NS LD LC EA +L M++ + R
Sbjct: 793 VGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACEL---MRSLRDGSLR 849
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAE 177
++ + +F+ + DG C G+ +A VF M G Y P+ +++N L++ LCK +
Sbjct: 850 VSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGY--VPNVVTYNVLMNGLCKTDKMER 907
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A + M DKGV PD TY +L+DA + + VD+ M G PN+ +N ++
Sbjct: 908 AHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIID 967
Query: 238 KLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMMKAL 273
L + EA FD M K L D +Y ++ L
Sbjct: 968 GLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGL 1005
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 50/324 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V Y+ ++ G + + LFEEL E+ G D V Y
Sbjct: 211 GVAPTIVTYNTIINGLCKSNELGAGMELFEELVER--GHHPDVVTY-------------- 254
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
N+++D+LC G +EA +L M + P N+
Sbjct: 255 -----------------------NTLIDSLCKAGDLEEARRLHGDMSSRSCVP-----NV 286
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS--PDTLSFNNLIDQLCKNGMLAEAEELY 182
+++V+ +G C GR +A E+ ++M C P+ +++N+ +D LCK M AEA EL
Sbjct: 287 VTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM 346
Query: 183 GEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ D V+PD T+ L+D + ++D+ + F M+ G PN+ YN LV L
Sbjct: 347 RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLC 406
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ ++ A + + MV K + D +Y ++ A ++DE LE++ G+ G
Sbjct: 407 KADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVV 466
Query: 300 ELQEFVKGELSKEGREEEVVKLME 323
+ G L K R E ++ +
Sbjct: 467 TFNSIIDG-LCKSDRSGEAFQMFD 489
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 14/244 (5%)
Query: 88 NSVLDALCNNGKFDEALKLFD-RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N VL +LC G+ AL++F M + P + ++N + +G C +E+
Sbjct: 184 NIVLQSLCRAGETARALEIFRGEMARDGVAP-----TIVTYNTIINGLCKSNELGAGMEL 238
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F ++ E PD +++N LID LCK G L EA L+G+MS + P+ TY +L++ +
Sbjct: 239 FEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCK 298
Query: 207 VNRVDDGATYFRKMV--DSGLRPNLAVYNRLVGKLVQVGMLDEA----KSFFDIMVKKLK 260
V R+D+ ++M + PN+ YN + L + M EA +S D + ++
Sbjct: 299 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL-RVS 357
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
D ++ ++ L G++DE + ++ G + V G L K + E
Sbjct: 358 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNG-LCKADKMERAHA 416
Query: 321 LMEK 324
++E
Sbjct: 417 MIES 420
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 117/276 (42%), Gaps = 41/276 (14%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V +S L+ G + G +D +F+++ GG V + V Y LM G E A
Sbjct: 853 DTVTFSTLIDGLCKCGQTDEACNVFDDMIA--GGYVPNVVTYNVLMNGLCKTDKMERAHA 910
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
V + V + + ++DA C DEAL+L M + P N+ +FN
Sbjct: 911 MIESMV--DKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTP-----NVVTFN 963
Query: 129 VMADGYCGQGRFKDAIEVFRKMG-EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ DG C + +A ++F M ++ +PD +++ LID L + G +AE L M D
Sbjct: 964 SIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD 1023
Query: 188 K-------GVN---------------------PDEYTYGLLMDACFEVNRVDDGATYFRK 219
+N PD+ T+ +L+ + + + F +
Sbjct: 1024 PDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEE 1083
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
MV L+P++ + L+ L + G + ++ +DIM
Sbjct: 1084 MVAKNLQPDVMTFGALIDGLCKAG---QVEATWDIM 1116
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 36/197 (18%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL-------------------- 165
SFN + G AI++FR RC P+ +++ L
Sbjct: 113 SFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRR 172
Query: 166 --------------IDQLCKNGMLAEAEELY-GEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+ LC+ G A A E++ GEM+ GV P TY +++ + N +
Sbjct: 173 IRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNEL 232
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFM 269
G F ++V+ G P++ YN L+ L + G L+EA+ D+ + + +Y +
Sbjct: 233 GAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVL 292
Query: 270 MKALSDGGKLDEILEIV 286
+ L G++DE E++
Sbjct: 293 INGLCKVGRIDEARELI 309
>gi|255660986|gb|ACU25662.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 376
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 142/282 (50%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +K+ G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKKS--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D A+ + + M P N +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP-----NAHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP+ +++N LI+ LCKN M EA L E+ DKG+NP
Sbjct: 173 GLVGASKFEDAIRVFREMGTMHCSPNIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 13/223 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VY+ L+ G V + R+F E+ + + Y +L+ G
Sbjct: 155 MIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTM--HCSPNIITYNTLINGLCKN 212
Query: 61 GMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
M EA E + G N V + + ++ LC + K ++AL+L++++ ++ P
Sbjct: 213 EMFGEAYNLVKELLDKGLNPGV----ITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKP- 267
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ NV+ G C G+ + A+ ++ M ++C+P+ +S N L++ K+G + A
Sbjct: 268 ----DVQMHNVLIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNA 323
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
++ + G+ PD +Y + + NR+ D + V
Sbjct: 324 LVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAV 366
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 11/226 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y E V S V AV N++L+ K + +L++ M +E N ++ SFN+
Sbjct: 13 YKEIV--ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNI 64
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G G+ + I ++ M + D++++ L+ CKNG + ++ + KG
Sbjct: 65 MMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124
Query: 190 VNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D + Y +++ C E N +D + M+ SG +PN VYN L+ LV ++A
Sbjct: 125 GVLDAFAYSAMINGLCKEAN-LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDA 183
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F ++ + +Y ++ L E +V +LD G
Sbjct: 184 IRVFREMGTMHCSPNIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + AE +Y E+ + V+PD Y +++ F V ++ D + M G R ++
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR-SV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIV-- 286
+ +N ++ L G +DE S +++M K ++D+ +Y ++ G +D+ L ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 287 ----GGILD 291
GG+LD
Sbjct: 120 AEQKGGVLD 128
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M SG + Y LV + G +D++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD + ++ G++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSG 159
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAEQK 123
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 165/341 (48%), Gaps = 48/341 (14%)
Query: 30 FRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNS 89
F LF E+ K G+ D V Y +L+ G+ + G ++A++ +N+ + EN +K N
Sbjct: 245 FDLFSEMVSK--GISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN--IKPDVYTFNI 300
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN-------------------------- 123
+++A C +GK E +FD M + P + N
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 124 ----LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ S+++M +G+C +F +A+ +F++M PD +++++LID L K+G ++ A
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L +M D+GV P+ TY ++DA + ++VD K D G +P+++ Y+ L+ L
Sbjct: 421 QLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGL 480
Query: 240 VQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
Q G L++A+ F D++VK +D +Y M++ G +E L ++ + D+G I
Sbjct: 481 CQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIP-- 538
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+ E ++ L +K E + AE RE A
Sbjct: 539 -----------DAKTYEIIILSLFKKDENDMAEKLLREMIA 568
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 148/323 (45%), Gaps = 10/323 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G V D + + +L KG +KG ++A +++ V ++ +++ LC G+
Sbjct: 150 GYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVAL--GFHFDQISYGTLIHGLCKVGETR 207
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
AL L R+ P N+ +N + D C +A ++F +M SPD ++
Sbjct: 208 AALDLLQRVDGNLVQP-----NVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVT 262
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
++ LI C G L +A +L+ +M + + PD YT+ +L++A + ++ +G T F M+
Sbjct: 263 YSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM 322
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLD 280
G++PN YN L+ V +++AKS F+ M + + D SY M+ K D
Sbjct: 323 KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFD 382
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK-KEREKAEAKAREAEA 339
E + + + I + G LSK GR ++L+++ +R
Sbjct: 383 EAMNLFKEMHRKNIIPDVVTYSSLIDG-LSKSGRISYALQLVDQMHDRGVPPNICTYNSI 441
Query: 340 AEAAKRSARAAIASLIPSKFGDK 362
+A ++ + A + +KF DK
Sbjct: 442 LDALCKTHQVDKAIALLTKFKDK 464
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 11/231 (4%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
YS ++ GF + D LF+E+ K ++ D V Y SL+ G G A++ ++
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRK--NIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ V + NS+LDALC + D+A+ L + K++ P ++ +++++
Sbjct: 426 M--HDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP-----DISTYSILIK 478
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G C G+ +DA +VF + + D ++ +I C G+ EA L +M D G P
Sbjct: 479 GLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIP 538
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
D TY +++ + F+ + D R+M+ GL N Y+ + +L Q
Sbjct: 539 DAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNF--YDLYLTRLAQTW 587
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 11/242 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ LM G+ + + +F + + GGV D Y ++ G+
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ--GGVNPDIQSYSIMINGFCKI 378
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EAM + E +N + V +S++D L +G+ AL+L D+M + PP
Sbjct: 379 KKFDEAMNLFKEMHRKN--IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPP--- 433
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N + D C + AI + K + PD +++ LI LC++G L +A +
Sbjct: 434 --NICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARK 491
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
++ ++ KG N D Y Y +++ C E ++ KM D+G P+ Y ++ L
Sbjct: 492 VFEDLLVKGYNLDVYAYTIMIQGFCVE-GLFNEALALLSKMEDNGCIPDAKTYEIIILSL 550
Query: 240 VQ 241
+
Sbjct: 551 FK 552
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 108/228 (47%), Gaps = 8/228 (3%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+ +N + N++ A N +L +L + + L L +M+ P N
Sbjct: 67 DDAVSLFNRLLRRNTTP--PAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP-----N 119
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L + N++ + +C G A VF K+ + PDT++F L LC G + +A +
Sbjct: 120 LVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHD 179
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++ G + D+ +YG L+ +V +++ + ++PN+ +YN ++ + +V
Sbjct: 180 KVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVK 239
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
+++EA F MV K + D +Y ++ GKL + +++ ++
Sbjct: 240 LVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 86/215 (40%), Gaps = 8/215 (3%)
Query: 107 FDRMKNEHN---PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFN 163
F +KN H P +N S++ + + DA+ +F ++ +P FN
Sbjct: 30 FQFLKNTHFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFN 89
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
++ L K+ L +M +G+ P+ +L++ ++ + + F K++
Sbjct: 90 KILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKM 149
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGK---- 278
G P+ + L L G + +A F D ++ D SY ++ L G+
Sbjct: 150 GYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAA 209
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
LD + + G ++ + ++ + K +L E
Sbjct: 210 LDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 146/321 (45%), Gaps = 8/321 (2%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VAD V+Y+ L+ G ++ D + E+++ G + V Y SL+ G +
Sbjct: 74 GIVADTVIYTALLSGLWKEKRLDQALAILHEMRDH--GCEPNVVTYNSLIDGLCKNNEPD 131
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM--KNEHNPPKRLAV 122
A E + S M V N++LD L GK + A+ LF M + H+ R +
Sbjct: 132 RAQELFEHMKSVECSPSM--VTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSP 189
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ +++V+ DG C R A+E+ M CSPD +++ L+D LCK +A A E+
Sbjct: 190 NVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVL 249
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM D G P+ TY L+ RV D R M G PN+ Y L+ L +V
Sbjct: 250 REMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKV 309
Query: 243 GMLDEAKSFFDIMVKKLKMDDAS-YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G + +A + M+ K D Y ++ L ++DE + ++ + GGI+
Sbjct: 310 GRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV-SGGIKPDVVT 368
Query: 302 QEFVKGELSKEGREEEVVKLM 322
V L + R +E +L+
Sbjct: 369 YSSVIYGLCRSNRLDEACRLL 389
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 171/361 (47%), Gaps = 51/361 (14%)
Query: 7 VADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKL------------------------ 40
+ P VY+Y L+ GF R G+ D R F+E++ K
Sbjct: 4 ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63
Query: 41 ---------GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
G+V+D V+Y +L+ G + + ++A+ +E + + + V NS++
Sbjct: 64 LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEM--RDHGCEPNVVTYNSLI 121
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
D LC N + D A +LF+ MK+ P ++ ++N + DG G+ + A+ +F++M
Sbjct: 122 DGLCKNNEPDRAQELFEHMKSVECSP-----SMVTYNTLLDGLFRTGKLERAMALFQEML 176
Query: 152 EY-------RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
+ RCSP+ ++++ LID LCK +++A EL M +G +PD TY +L+D
Sbjct: 177 DRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGL 236
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDD 263
+ ++V R+M+D+G PNL YN L+ L + + +A + D+ + +
Sbjct: 237 CKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNV 296
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+Y ++ L G++ + ++ ++D GG + G L K + +E + L+
Sbjct: 297 VTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLING-LCKADQVDESIALLR 355
Query: 324 K 324
+
Sbjct: 356 R 356
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 139/325 (42%), Gaps = 11/325 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ YS L+ G + L E +K + G D + Y L+ G + A E
Sbjct: 192 ITYSVLIDGLCKANRVSQAVELLESMKAR--GCSPDVITYTILVDGLCKESKVAAAWEVL 249
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E + ++ + V NS+L LC + +AL L M P N+ ++ +
Sbjct: 250 REML--DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTP-----NVVTYGTL 302
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DG C GR KDA + M + +PD + +N LI+ LCK + E+ L G+
Sbjct: 303 IDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 362
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD TY ++ NR+D+ + G P++ +Y+ L+ L + G +DEA
Sbjct: 363 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 422
Query: 251 FFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
+++M D +Y ++ L G++DE ++ ++ G + +KG L
Sbjct: 423 LYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG-L 481
Query: 310 SKEGREEEVVKLMEKKEREKAEAKA 334
+E ++L+E+ ER A
Sbjct: 482 CDLNHLDEAIELVEEMERSNCAPSA 506
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 133/301 (44%), Gaps = 15/301 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y L+ G + G + ++ +K G D ++Y L+ G
Sbjct: 287 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK--GGTPDLMIYNMLINGLCKA 344
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+E++ AV + +K V +SV+ LC + + DEA +L +K+ PP +
Sbjct: 345 DQVDESIALLRRAV--SGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVI 402
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C G+ +A +++ M C D ++++ LID LCK G + EA
Sbjct: 403 L-----YSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHL 457
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G P TY L+ ++N +D+ +M S P+ YN L+ +
Sbjct: 458 LLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMC 517
Query: 241 QVGMLDEAKSFFD------IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
++ +D A + + +D +Y ++ L G++ E L+ ++D+G
Sbjct: 518 RMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGV 577
Query: 295 I 295
I
Sbjct: 578 I 578
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 15/259 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V YS ++ G R D RL +K + G D ++Y +L+ G G +
Sbjct: 361 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSR--GCPPDVILYSTLIDGLCKAGKVD 418
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + Y G+ + V ++++D LC G+ DEA L RM PP +
Sbjct: 419 EAFDLYEVMAGDGCDADV--VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTM---- 472
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C +AIE+ +M C+P +++N LI +C+ + A L +
Sbjct: 473 -TYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQ 531
Query: 185 MSDK-----GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ G D Y L+D + RV + YF++M+D+G+ P+ Y+ L+ L
Sbjct: 532 AKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGL 591
Query: 240 VQVGMLDEAKSF-FDIMVK 257
+ L E + D MV+
Sbjct: 592 KKSKDLHELRHLVLDQMVQ 610
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 9/248 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V + V Y+ L+ G R L ++ + G + V YG+L+ G
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR--GCTPNVVTYGTLIDGLCKV 309
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A + + + + + + N +++ LC + DE++ L R + P
Sbjct: 310 GRVKDACAMLADMIDKGGTPDL--MIYNMLINGLCKADQVDESIALLRRAVSGGIKP--- 364
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + G C R +A + + C PD + ++ LID LCK G + EA +
Sbjct: 365 --DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 422
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY M+ G + D TY L+D + RVD+ +MV G P+ YN L+ L
Sbjct: 423 LYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 482
Query: 241 QVGMLDEA 248
+ LDEA
Sbjct: 483 DLNHLDEA 490
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 157/334 (47%), Gaps = 11/334 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF G V + L+ G +LF+E+ + G + Y +++KG
Sbjct: 132 MFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKM--GFAPSLITYTTIIKGLCKI 189
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A++ + E K VA N+V+D+LC + + +EA+ F M ++ PP
Sbjct: 190 GHTTNALQLLKKM--EEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPP--- 244
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +++ + G+C G+ +A +F++M P+T++F L+D LCK GM+ EA
Sbjct: 245 --NVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARR 302
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M++ GV PD YTY LMD +++D+ F MV G P++ VYN L+
Sbjct: 303 VFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHC 362
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ L+EAK+ M + L D +Y +M+ G+ ++ + G + S
Sbjct: 363 KSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSI 422
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAK 333
+ G L K G +E +L++ + K E
Sbjct: 423 TYSILLDG-LCKHGHLDEAFRLLKAMQESKIEPH 455
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 160/321 (49%), Gaps = 11/321 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V YS ++ GF G + LF+++ + V+ + V + L+ G +GM
Sbjct: 240 QGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGR--NVMPNTVTFTILVDGLCKEGMI 297
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA + E + EN V+ A ++++D C + DEA KLFD M K A +
Sbjct: 298 LEARRVF-EMMTENG-VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVG-----KGFAPS 350
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +N++ +G+C R +A + +M + +PDT++++ L+ C+ G A++L+
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK 410
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G+ PD TY +L+D + +D+ + M +S + P++ +YN L+ + G
Sbjct: 411 EMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFG 470
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L+ A+ F ++ VK ++ +Y M+ L G +E E+ ++ +G + S
Sbjct: 471 KLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYN 530
Query: 303 EFVKGELSKEGREEEVVKLME 323
++G L + G V+L+E
Sbjct: 531 VAIQGFL-RNGDPSNAVRLIE 550
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 141/320 (44%), Gaps = 49/320 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + + V ++ L+ G ++G R+FE + E GV D Y +LM GY ++
Sbjct: 272 MIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTEN--GVEPDAYTYSALMDGYCLQ 329
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA + ++ VG+ + S N +++ C + + +EA L M + P +
Sbjct: 330 SQMDEAQKLFDIMVGKGFAP--SVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTV 387
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA-- 178
+++ + G+C GR + A ++F++M Y PD+++++ L+D LCK+G L EA
Sbjct: 388 -----TYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFR 442
Query: 179 ---------------------------------EELYGEMSDKGVNPDEYTYGLLMDACF 205
EL+ + KG+ P TY +++
Sbjct: 443 LLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLL 502
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDA 264
+ ++ FRKMV +G PN YN + ++ G A + MV + D +
Sbjct: 503 KEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSS 562
Query: 265 SYKFMMKALSDGGKLDEILE 284
+++ ++ S+ DEI+
Sbjct: 563 TFQMLLDLESN----DEIIS 578
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 104/259 (40%), Gaps = 9/259 (3%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR--FK 141
V N +L +L + + L +M + P N+ + ++ + C R
Sbjct: 69 VVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRP-----NVYTLTILINCLCHSNRDHVH 123
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
A KM + P ++F L++ LC + +A +L+ E+ G P TY ++
Sbjct: 124 FAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTII 183
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LK 260
++ + +KM + G +P++ YN ++ L + +EA FF MV + +
Sbjct: 184 KGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIP 243
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
+ +Y ++ + G+L+E + ++ + + V G L KEG E +
Sbjct: 244 PNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDG-LCKEGMILEARR 302
Query: 321 LMEKKEREKAEAKAREAEA 339
+ E E A A
Sbjct: 303 VFEMMTENGVEPDAYTYSA 321
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 141/281 (50%), Gaps = 10/281 (3%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
D V +S L+ F R G+ D E++E G++ DGV+Y ++ G+ G+ EA
Sbjct: 296 TPDVVSFSCLIGLFTRRGEMDHAAEYLREMRE--FGLMPDGVIYTMVIGGFCRAGLMLEA 353
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ +E V V N++L+ LC + +A +L + MK PP +L +
Sbjct: 354 LRVRDEMVA--FGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPP-----DLCT 406
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F + GYC G + A++ F + + R PD +++N LID +C+ G L +A EL+ +M
Sbjct: 407 FTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMH 466
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ + P+ TY +L+D+ E +VD+ + +MV+ G+ PN+ YN ++ + G +
Sbjct: 467 SREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVS 526
Query: 247 EAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIV 286
+ + F M K+ D +Y ++ GK+ E ++
Sbjct: 527 KGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLL 567
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 10/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D V+Y+ ++ GF R G R+ +E+ G + D V Y +L+ G +
Sbjct: 329 GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVA--FGCLPDVVTYNTLLNGLCKERRLS 386
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E NE + V +++ C +G ++AL+ FD + ++ RL ++
Sbjct: 387 DAEELLNEM--KERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQ-----RLRPDI 439
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG C QG A E++ M P+ ++++ LID C+ G + A E
Sbjct: 440 VTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDE 499
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +KG+ P+ TY ++ V G + KM + P+L YN L+ V+ G
Sbjct: 500 MVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK 559
Query: 245 LDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
+ EA + IM + ++ D +Y ++ S G + E
Sbjct: 560 MHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQE 597
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 134/283 (47%), Gaps = 17/283 (6%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V ++ ++ R GD + L + + K G+ V Y S++KG G ++A
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSK--GIKPGLVTYNSVLKGLLRNGRWDKAR 249
Query: 68 ECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
E + +A G V+ + N ++ C G+ +EAL+ + M+ +R+ ++
Sbjct: 250 EVFRAMDACGVAPDVR----SFNMLIGGFCRAGELEEALRFYKEMRG-----RRVTPDVV 300
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
SF+ + + +G A E R+M E+ PD + + +I C+ G++ EA + EM
Sbjct: 301 SFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM 360
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
G PD TY L++ + R+ D +M + G+ P+L + L+ + G +
Sbjct: 361 VAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNI 420
Query: 246 DEAKSFFDIMV-KKLKMDDASYKFMMKALS---DGGKLDEILE 284
++A FFD + ++L+ D +Y ++ + D GK +E+ +
Sbjct: 421 EKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWD 463
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 122/262 (46%), Gaps = 12/262 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D ++ L+ G+ RDG+ + + F+ + ++ + D V Y +L+ G +G
Sbjct: 398 RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQ--RLRPDIVTYNTLIDGMCRQGDL 455
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A E +++ + + + V + ++D+ C G+ D A D M N K + N
Sbjct: 456 GKANELWDDM--HSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVN-----KGIVPN 508
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + GYC G + KM + PD +++N LI K G + EA L
Sbjct: 509 IMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLK 568
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVN-RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M ++ V PD TY +++ F V+ + + ++KM G+ P+ Y ++ V
Sbjct: 569 IMENENVQPDAVTYNMIISG-FSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVA 627
Query: 243 GMLDEAKSFFDIMVKK-LKMDD 263
G ++ D M++K L DD
Sbjct: 628 GNSKKSFQLHDEMLQKGLAPDD 649
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 128/271 (47%), Gaps = 10/271 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + D V Y+ L+ G ++ L E+KE+ GV D + +L+ GY
Sbjct: 360 MVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKER--GVPPDLCTFTTLIHGYCRD 417
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A++ ++ + ++ V N+++D +C G +A +L+D M + P +
Sbjct: 418 GNIEKALQFFDTI--SDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHV 475
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++++ D +C +G+ +A +M P+ +++N++I C++G +++ ++
Sbjct: 476 -----TYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQ 530
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+M V PD TY L+ + ++ + + M + ++P+ YN ++
Sbjct: 531 FLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFS 590
Query: 241 QVGMLDEAKSFFDIM-VKKLKMDDASYKFMM 270
G + EA + M + ++ D +Y M+
Sbjct: 591 VHGNMQEADWVYKKMGARGIEPDRYTYMSMI 621
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 6/212 (2%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E V V +N ++DA G + A+ L D M ++ P L ++N + G
Sbjct: 186 EKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKP-----GLVTYNSVLKGLL 240
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
GR+ A EVFR M +PD SFN LI C+ G L EA Y EM + V PD
Sbjct: 241 RNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVV 300
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
++ L+ +D A Y R+M + GL P+ +Y ++G + G++ EA D M
Sbjct: 301 SFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM 360
Query: 256 VKKLKMDD-ASYKFMMKALSDGGKLDEILEIV 286
V + D +Y ++ L +L + E++
Sbjct: 361 VAFGCLPDVVTYNTLLNGLCKERRLSDAEELL 392
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 8/181 (4%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-PDTLSFNNLIDQLCKNGMLAEAEE 180
VN + N+M YC +F + V +M E RC PD ++ N ++D + G + A
Sbjct: 157 VNTYTLNIMVHSYCKTLQFGEVDTVISEM-EKRCVFPDVVTHNVMVDARFRAGDVEAAMA 215
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M KG+ P TY ++ R D FR M G+ P++ +N L+G
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVG-----GILDDGG 294
+ G L+EA F+ M +++ D S+ ++ + G++D E + G++ DG
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV 335
Query: 295 I 295
I
Sbjct: 336 I 336
>gi|255660952|gb|ACU25645.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 376
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 141/282 (50%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +KE G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKES--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D AL + + M P N+ +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKP-----NVHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG C P +++N LI+ LCKN M EA L E+ DKG++P
Sbjct: 173 GLAGASKFEDAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 132/281 (46%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++G D + E+ E+ GGV+ D Y +++ G + +
Sbjct: 89 GFVEDSITYGILVHGFCKNGYIDKSLHVL-EMAEQKGGVL-DAFAYSAMINGLCKEANLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ N + S K + N++++ L KF++A+++F M H PP +
Sbjct: 147 RALSVLNGMI--KSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCPPTII---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C F +A + +++ + P ++++ L+ LC + + A +L+ +
Sbjct: 201 -TYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + + M PNL +N L+ + G
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY +K L ++ D IL
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLKGLCSCKRISDAIL 360
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 9/218 (4%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S V AV N++L+ K + +L++ M +E N ++ SFN+M G
Sbjct: 19 SKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNIMMRGLFDN 72
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G+ + I ++ M E D++++ L+ CKNG + ++ + KG D + Y
Sbjct: 73 GKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAY 132
Query: 198 GLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIM 255
+++ C E N +D + M+ SG +PN+ VYN L+ L ++A + F ++
Sbjct: 133 SAMINGLCKEAN-LDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMG 191
Query: 256 VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y ++ L E +V +LD G
Sbjct: 192 TMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKELVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M +SG + Y LV + G +D++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD L ++ G++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSG 159
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKELVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAEQK 123
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 151/316 (47%), Gaps = 11/316 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D Y L+ G + G + LF++L GV V Y SL+ G M ++A E
Sbjct: 9 DSWSYGILIDGLAKAGKLNDARDLFQKLLHS--GVTPSTVAYTSLIHGLCMANSFDDARE 66
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + S V N ++DA C G +EA L +M + + P ++ ++N
Sbjct: 67 LFADM--NRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVP-----DVVTYN 119
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ DG C GR ++A+ +F +M C+P+ S N +I LC+ + +A +++ EM +
Sbjct: 120 TVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAR 179
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+ PD ++YG+L+D + ++++ FR+M+DSG+ P+ YN ++ + LDEA
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239
Query: 249 KSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
F M K + ++ ++ A GK+DE ++ + DDG + + G
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISG 299
Query: 308 ELSKEGREEEVVKLME 323
L R ++ L+E
Sbjct: 300 -LCSIARVDDARHLLE 314
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 134/294 (45%), Gaps = 10/294 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V D V Y+ +M G + G + LF E+ E+LG + + +++ G +
Sbjct: 106 MIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEM-ERLG-CTPNRRSHNTIILGLCQQ 163
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A + ++E E + + + ++D L GK +EA KLF RM + P +
Sbjct: 164 SKIDQACQVFHEM--EARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAV 221
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++NV+ G C +A+E+F+ M C P +FN LID CK G + EA
Sbjct: 222 -----TYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFR 276
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M+D G PD TY L+ + RVDD MV +P + N L+ L
Sbjct: 277 LLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC 336
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G + EA+ D MV + D +Y ++ G+ + E++ ++ G
Sbjct: 337 KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 127/317 (40%), Gaps = 35/317 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D Y L+ G + G + ++LF + + G+ V Y ++ G +
Sbjct: 176 MEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDS--GITPSAVTYNVVIHGMCLA 233
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
+EA+E + + + S N ++DA C GK DEA +L RM ++ + P
Sbjct: 234 YTLDEALELFKSM--RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVV 291
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
++ + + N + G C GR K+A EV M
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 351
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
SPD +++N L+ C+ G A EL +M +G+ P+ TY L+ + NR+
Sbjct: 352 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFM 269
+ F +M SG PNL Y L+ G +D F MV + D Y +
Sbjct: 412 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471
Query: 270 MKALSDGGKLDEILEIV 286
L G+ LEI+
Sbjct: 472 AAELCKSGRSARALEIL 488
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M E SPD+ S+ LID L K G L +A +L+ ++ GV P Y L+ N
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKF 268
DD F M G P+ YN ++ + GML+EA M++ + D +Y
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 269 MMKALSDGGKLDEIL 283
+M L G+++E L
Sbjct: 121 VMDGLCKSGRVEEAL 135
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 166/347 (47%), Gaps = 48/347 (13%)
Query: 30 FRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNS 89
F LF E+ K G+ D V Y +L+ G+ + G +A++ +N+ + EN +K N
Sbjct: 245 FDLFSEMISK--GISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN--IKPDVYTFNI 300
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN-------------------------- 123
+++A C +GK E +FD M + P + N
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 124 ----LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ S+++M +G+C +F +A+ +F++M PD +++++LID L K+G ++ A
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L +M D+GV P TY ++DA ++++VD K+ D G++PN+ Y+ L+ L
Sbjct: 421 QLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGL 480
Query: 240 VQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
Q G L++A+ F+ ++VK ++ +Y M++ G +E L ++ + D+G I
Sbjct: 481 CQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIP-- 538
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKR 345
+ E ++ L +K E + AE RE A R
Sbjct: 539 -----------DAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPR 574
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 14/325 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G V D + + +L+KG +KG ++A +++ V ++ +++ LC G+
Sbjct: 150 GYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVA--LGFHFDQISYGTLIHGLCKVGETR 207
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
AL L R+ P N+ +N + D C +A ++F +M SPD ++
Sbjct: 208 AALDLLQRVDGNLVQP-----NVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVT 262
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
++ LI C G L +A +L+ +M + + PD YT+ +L++A + ++ +G T F M+
Sbjct: 263 YSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM 322
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLD 280
G++PN YN L+ V +++AKS F+ M + + D SY M+ K D
Sbjct: 323 KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFD 382
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA- 339
E + + + I + G LSK GR ++L+++ R +
Sbjct: 383 EAMNLFKEMHRKNIIPDVVTYSSLIDG-LSKSGRISYALQLVDQMHDRGVPPTIRTYNSI 441
Query: 340 --AEAAKRSARAAIASLIPSKFGDK 362
A AIA L +K DK
Sbjct: 442 LDALCKIHQVDKAIALL--TKLKDK 464
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 110/221 (49%), Gaps = 10/221 (4%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
YS ++ GF + D LF+E+ K ++ D V Y SL+ G G A++ ++
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRK--NIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ V + NS+LDALC + D+A+ L ++K++ P N+ +++++
Sbjct: 426 M--HDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQP-----NMYTYSILIK 478
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G C G+ +DA +VF + + + ++ +I C G+ EA L +M D G P
Sbjct: 479 GLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIP 538
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP-NLAVY 232
D TY +++ + F+ + D R+M+ G+RP +A++
Sbjct: 539 DAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIAIW 579
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 110/228 (48%), Gaps = 8/228 (3%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+ +N + N++ A N +L +L + + L L +M+ P N
Sbjct: 67 DDAVSLFNRLLRRNTTP--PAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP-----N 119
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L + N++ + +C G A VF K+ + PDT++F LI LC G + +A +
Sbjct: 120 LVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHD 179
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++ G + D+ +YG L+ +V +++ + ++PN+ +YN ++ + +V
Sbjct: 180 KVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVK 239
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
+++EA F M+ K + D +Y ++ GKL++ +++ ++
Sbjct: 240 LVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 87/215 (40%), Gaps = 8/215 (3%)
Query: 107 FDRMKNEHN---PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFN 163
F +KN H P +N S++ + + DA+ +F ++ +P FN
Sbjct: 30 FQFLKNTHFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFN 89
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
++ L K+ L +M +G+ P+ +L++ ++ + + F K++
Sbjct: 90 KILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKM 149
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGK---- 278
G P+ + L+ L G + +A F D ++ D SY ++ L G+
Sbjct: 150 GYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAA 209
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
LD + + G ++ + ++ + K +L E
Sbjct: 210 LDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244
>gi|255660964|gb|ACU25651.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 376
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 140/282 (49%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +KE G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKES--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D AL + M P N+ +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDRALYVLTGMIKSGCKP-----NIHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI LCK M EA L E+ DKG++P
Sbjct: 173 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLISGLCKKEMFGEAYNLVKELLDKGLDP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ +K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRRKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 11/271 (4%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+F+E+ E V D VVY +++ GYF ++ E + E +G + +S
Sbjct: 4 GDIDGAERVFKEIVES--KVSPDAVVYNAMLNGYFRVAKIKDCFELW-EMMGSEGNRSVS 60
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ N ++ L +NGK DE + +++ MK + ++ ++ G+C G +
Sbjct: 61 SF--NIMMRGLFDNGKVDEVISIWELMKESGFVEDSI-----TYGILVHGFCKNGYIDKS 113
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ V + D +++ +I+ LCK L A + M G P+ + Y L++
Sbjct: 114 LHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLTGMIKSGCKPNIHVYNTLING 173
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMD 262
++ +D FR+M P + YN L+ L + M EA + +++ K L
Sbjct: 174 LVGASKFEDAIRVFREMGTMHCSPTIITYNTLISGLCKKEMFGEAYNLVKELLDKGLDPG 233
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y +MK L K++ L++ + G
Sbjct: 234 VITYSMLMKGLCLDHKVERALQLWNQVTSKG 264
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 130/281 (46%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++G D + E+ E+ GGV+ D Y +++ G + +
Sbjct: 89 GFVEDSITYGILVHGFCKNGYIDKSLHVL-EMAEQKGGVL-DAFAYSAMINGLCKEANLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ + S K + N++++ L KF++A+++F M H P +
Sbjct: 147 RALYVLTGMI--KSGCKPNIHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTII---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C + F +A + +++ + P ++++ L+ LC + + A +L+ +
Sbjct: 201 -TYNTLISGLCKKEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + + M PNL +N L+ + G
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRRKCAPNLVSHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY +K L ++ D IL
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY+ L+ G V + R+F E+ + Y +L+ G K M EA
Sbjct: 166 VYNTLINGLVGASKFEDAIRVFREMGTM--HCSPTIITYNTLISGLCKKEMFGEAYNLVK 223
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E + + + + + ++ LC + K + AL+L++++ ++ P ++ N++
Sbjct: 224 ELL--DKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKP-----DVQMHNILI 276
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G C G+ + A+ ++ M +C+P+ +S N L++ K+G + A ++ + G+
Sbjct: 277 HGLCSVGKMQLALSLYFDMNRRKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLE 336
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
PD +Y + + NR+ D + V
Sbjct: 337 PDIISYNITLKGLCSCNRISDAILFLHDAV 366
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A VF+++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVFKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M +SG + Y LV + G +D++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD L ++ G++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALYVLTGMIKSG 159
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D F+++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVFKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAEQK 123
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 145/317 (45%), Gaps = 51/317 (16%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ YS L+ G + G D RL+EE+ EK V D V Y S + G EA +C
Sbjct: 180 ISYSTLLDGLCKAGRLDEACRLWEEMVEK--SCVPDLVAYTSFVTGLCKANRVAEACDCC 237
Query: 71 NEAVGENS---SVKMSAV------------ANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
+ V + S +V S V A N +++ LC +G DEA K F+ M + ++
Sbjct: 238 RKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNH 297
Query: 116 PP---------------KRLA------------------VNLGSFNVMADGYCGQGRFKD 142
PP KRL NL ++N+M D C + +
Sbjct: 298 PPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDE 357
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A E+ +M Y SPD ++++ L+D LCK G L A +L EMS +GV PD +T +++
Sbjct: 358 AQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILN 417
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKM 261
A + +VD ++ M G P+L YN L+ L + G +DEA +F MV K
Sbjct: 418 ALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTP 477
Query: 262 DDASYKFMMKALSDGGK 278
D SY ++ AL G+
Sbjct: 478 DVFSYTIIITALCRSGQ 494
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 129/297 (43%), Gaps = 29/297 (9%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ YS ++ G + D +F+ + GG V D V + SL+KG EA +
Sbjct: 109 ITYSVVIDGCCKASRVDDALEIFKTMSSG-GGCVPDVVTFNSLLKGLCSGERMSEAFVLF 167
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + ++ +++LD LC G+ DEA +L++ M + P +L ++
Sbjct: 168 EYMA--KAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP-----DLVAYTSF 220
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF-----------------NNLIDQLCKNG 173
G C R +A + RKM D ++F N +I+ LC++G
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSG 280
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG---LRPNLA 230
ML EA + + EM + P + L+ A + R+ DG F++M PNL
Sbjct: 281 MLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE 340
Query: 231 VYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
YN +V L + LDEA+ + M L D +Y ++ L GKLD +++
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 9/266 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG+ Y+ + + + F++++ + G D Y +++G G
Sbjct: 32 KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRR--GYPPDDFTYSIVLRGLCKAGEL 89
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A E + S VK++ + + V+D C + D+AL++F M + +
Sbjct: 90 DKAKELLGQL--RESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGG----CVPD 143
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN + G C R +A +F M + C P+ +S++ L+D LCK G L EA L+
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +K PD Y + + NRV + RKMV G + + ++ ++G L + G
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263
Query: 244 MLDEAKS-FFDIMVKKLKMDDASYKF 268
+EA++ + + + +D+A F
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTF 289
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 110/261 (42%), Gaps = 45/261 (17%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ D V Y +L+ G G + A + E E V + + S+L+AL GK D
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG--VFPDSFTDASILNALSKAGKVD 426
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
AL + MK + P +L ++N + DG C GR +AI KM +C+PD S
Sbjct: 427 YALSHLETMKARGSTP-----DLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFS 481
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG----------------------- 198
+ +I LC++G A A ++ EM +GV PD Y
Sbjct: 482 YTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL 541
Query: 199 ---------LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+++D + + +D +M D+G + Y +V L ++G +D+A+
Sbjct: 542 CKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKAR 601
Query: 250 SFFD------IMVKKLKMDDA 264
D V++L M+ A
Sbjct: 602 QLVDDASETHTSVERLSMEKA 622
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 110/284 (38%), Gaps = 51/284 (17%)
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA---------- 121
+ +G + S N LDAL A + F +M+ PP
Sbjct: 26 DWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCK 85
Query: 122 --------------------VNLGSFNVMADGYCGQGRFKDAIEVFRKMGE-YRCSPDTL 160
+N+ +++V+ DG C R DA+E+F+ M C PD +
Sbjct: 86 AGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVV 145
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+FN+L+ LC ++EA L+ M+ G P+ +Y L+D + R+D+ + +M
Sbjct: 146 TFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEM 205
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLD 280
V+ P+L Y V L + + EA MV K G K D
Sbjct: 206 VEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK-----------------GSKAD 248
Query: 281 EI-LEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+ V GIL G +EE Q + L + G +E K E
Sbjct: 249 AVAFSTVIGILCKKG--HAEEAQNQMIEHLCRSGMLDEACKTFE 290
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 45/259 (17%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V YS L+ G + G D L EE+ ++ GV D S++ G +
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKE--GVFPDSFTDASILNALSKAGKVD 426
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ S+ + V N++LD LC G+ DEA+ +M P ++
Sbjct: 427 YALSHLETMKARGSTPDL--VTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTP-----DV 479
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ---------------- 168
S+ ++ C G+ A +F++M + PDT+ +++L+D
Sbjct: 480 FSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKT 539
Query: 169 ----------------LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
LCK G +A E+ M+D G D +TY ++ ++ +VD
Sbjct: 540 SLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDK 599
Query: 213 GATYFRKMVDSGLRPNLAV 231
R++VD + +V
Sbjct: 600 A----RQLVDDASETHTSV 614
>gi|255660990|gb|ACU25664.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 376
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 141/282 (50%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +K+ G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKKS--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A + + A A +++++ LC D A+ + + M P N +N + +
Sbjct: 120 A--QQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP-----NAHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA L E+ DKG+NP
Sbjct: 173 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 108/280 (38%), Gaps = 65/280 (23%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK------------------------- 39
GFV D + Y L+ GF ++G D + E ++K
Sbjct: 89 GFVEDSITYGILVHGFCKNGYIDKSLHVLEMAQQKGGVLDAFAYSAMINGLCKEANLDRA 148
Query: 40 ---LGGVVSDGV-----VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
L G++ G VY +L+ G E+A+ + E + S + + N+++
Sbjct: 149 VSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP--TIITYNTLI 206
Query: 92 DALCNNGKFDEALKLFDRMKN-------------------EHNPPKRLAV---------- 122
+ LC N F EA L + + +H K L +
Sbjct: 207 NGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFK 266
Query: 123 -NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ N++ G C G+ + A+ ++ M ++C+P+ +S N L++ K+G + A +
Sbjct: 267 PDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVI 326
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ + G+ PD +Y + + NR+ D + V
Sbjct: 327 WARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAV 366
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 11/226 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y E V S V AV N++L+ K + +L++ M +E N ++ SFN+
Sbjct: 13 YKEIV--ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNI 64
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G G+ + I ++ M + D++++ L+ CKNG + ++ + KG
Sbjct: 65 MMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAQQKG 124
Query: 190 VNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D + Y +++ C E N +D + M+ SG +PN VYN L+ LV ++A
Sbjct: 125 GVLDAFAYSAMINGLCKEAN-LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDA 183
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F ++ +Y ++ L E +V +LD G
Sbjct: 184 IRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M SG + Y LV + G +D++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD + ++ G++ G
Sbjct: 120 AQQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSG 159
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + G +E S V G K G ++ + ++E +++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAQQK 123
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 145/317 (45%), Gaps = 51/317 (16%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ YS L+ G + G D RL+EE+ EK V D V Y S + G EA +C
Sbjct: 180 ISYSTLLDGLCKAGRLDEACRLWEEMVEK--SCVPDLVAYTSFVTGLCKANRVAEACDCC 237
Query: 71 NEAVGENS---SVKMSAV------------ANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
+ V + S +V S V A N +++ LC +G DEA K F+ M + ++
Sbjct: 238 RKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNH 297
Query: 116 PP---------------KRLA------------------VNLGSFNVMADGYCGQGRFKD 142
PP KRL NL ++N+M D C + +
Sbjct: 298 PPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDE 357
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A E+ +M Y SPD ++++ L+D LCK G L A +L EMS +GV PD +T +++
Sbjct: 358 AQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILN 417
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKM 261
A + +VD ++ M G P+L YN L+ L + G +DEA +F MV K
Sbjct: 418 ALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTP 477
Query: 262 DDASYKFMMKALSDGGK 278
D SY ++ AL G+
Sbjct: 478 DVFSYTIIITALCRSGQ 494
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 129/297 (43%), Gaps = 29/297 (9%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ YS ++ G + D +F+ + GG V D V + SL+KG EA +
Sbjct: 109 ITYSVVIDGCCKASRVDDALEIFKTMSAG-GGCVPDVVTFNSLLKGLCSGERMSEAFVLF 167
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + ++ +++LD LC G+ DEA +L++ M + P +L ++
Sbjct: 168 EYMA--KAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP-----DLVAYTSF 220
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF-----------------NNLIDQLCKNG 173
G C R +A + RKM D ++F N +I+ LC++G
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSG 280
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG---LRPNLA 230
ML EA + + EM + P + L+ A + R+ DG F++M PNL
Sbjct: 281 MLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE 340
Query: 231 VYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
YN +V L + LDEA+ + M L D +Y ++ L GKLD +++
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 9/266 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG+ Y+ + + + F++++ + G D Y +++G G
Sbjct: 32 KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRR--GYPPDDFTYSIVLRGLCKAGEL 89
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A E + S VK++ + + V+D C + D+AL++F M +
Sbjct: 90 DKAKELLGQL--RESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGG----CVPD 143
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN + G C R +A +F M + C P+ +S++ L+D LCK G L EA L+
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +K PD Y + + NRV + RKMV G + + ++ ++G L + G
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263
Query: 244 MLDEAKS-FFDIMVKKLKMDDASYKF 268
+EA++ + + + +D+A F
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTF 289
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 45/261 (17%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ D V Y +L+ G G + A + E E V + + S+L+AL GK D
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG--VFPDSFTDASILNALSKAGKVD 426
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
AL + MK + P +L ++N + DG C GR +AI KM +C+PD S
Sbjct: 427 YALSHLETMKARGSTP-----DLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFS 481
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA------------------ 203
+ +I LC++G A A ++ EM +GV PD Y L+D
Sbjct: 482 YTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL 541
Query: 204 C--------------FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
C + + +D +M D+G + Y +V L ++G +D+A+
Sbjct: 542 CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKAR 601
Query: 250 SFFD------IMVKKLKMDDA 264
D V++L M+ A
Sbjct: 602 QLVDDASETHTSVERLSMEKA 622
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 110/284 (38%), Gaps = 51/284 (17%)
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA---------- 121
+ +G + S N LDAL A + F +M+ PP
Sbjct: 26 DWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCK 85
Query: 122 --------------------VNLGSFNVMADGYCGQGRFKDAIEVFRKMGE-YRCSPDTL 160
+N+ +++V+ DG C R DA+E+F+ M C PD +
Sbjct: 86 AGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVV 145
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+FN+L+ LC ++EA L+ M+ G P+ +Y L+D + R+D+ + +M
Sbjct: 146 TFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEM 205
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLD 280
V+ P+L Y V L + + EA MV K G K D
Sbjct: 206 VEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK-----------------GSKAD 248
Query: 281 EI-LEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+ V GIL G +EE Q + L + G +E K E
Sbjct: 249 AVAFSTVIGILCKKG--HAEEAQNQMIEHLCRSGMLDEACKTFE 290
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 45/259 (17%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V YS L+ G + G D L EE+ ++ GV D S++ G +
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKE--GVFPDSFTDASILNALSKAGKVD 426
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ S+ + V N++LD LC G+ DEA+ +M P ++
Sbjct: 427 YALSHLETMKARGSTPDL--VTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTP-----DV 479
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL------------------- 165
S+ ++ C G+ A +F++M + PDT+ +++L
Sbjct: 480 FSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKT 539
Query: 166 -------------IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
+D LCK G +A E+ M+D G D +TY ++ ++ +VD
Sbjct: 540 SLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDK 599
Query: 213 GATYFRKMVDSGLRPNLAV 231
R++VD + +V
Sbjct: 600 A----RQLVDDASETHTSV 614
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 149/272 (54%), Gaps = 6/272 (2%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
++Y+ ++ GF + G D F L +E+KE+ GV D +++ +L++G KG +EA+E +
Sbjct: 112 IMYTTVINGFCKAGQVDQAFELLDEMKER--GVKMDVLLHSTLIQGLCRKGRIDEALEQF 169
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+++GE S + + N+V++ LC + DEAL+LFD M+ + ++ S++ +
Sbjct: 170 -KSMGEECSP--NVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTV 226
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
D C R A E F++M C+P+ +++++LID LCK +E EL M +KG
Sbjct: 227 IDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGF 286
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-K 249
+ + ++ A ++ + + +F +++ SG +PN+ YN V L + G +DEA +
Sbjct: 287 GINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYR 346
Query: 250 SFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+++ K+ D +Y ++ G++D+
Sbjct: 347 ILLEMVESKVTPDVITYSSIIDGFCKAGRMDK 378
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 142/319 (44%), Gaps = 11/319 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V YS L+ G + L +KEK G+ + + + +++ + +E
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGI--NIIDFNAMLHALWKNDEQE 307
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + + + S K + V N + LC G+ DEA ++ M P ++
Sbjct: 308 KACQFFERLL--KSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTP-----DV 360
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + DG+C GR A +VF +M + C P ++F L+ ++ EA ++ +
Sbjct: 361 ITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHED 420
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + G P TY +LMD + V+ + KM +P+ Y L+ L +
Sbjct: 421 MVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARR 480
Query: 245 LDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+DEAK F D+M + + A +++ L G++DE ++ +++ G E +
Sbjct: 481 VDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKI 540
Query: 304 FVKGELSKEGREEEVVKLM 322
V+ EL + E KL+
Sbjct: 541 LVE-ELYLRKKWEAASKLL 558
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 119/313 (38%), Gaps = 42/313 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V + PV + L+ GF S FR+ E++ G + Y LM
Sbjct: 386 MMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVN--AGFIPGLQTYNVLMDCVCGA 443
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E A+E Y++ + + A ++ LC + DEA + D M+ ++ P
Sbjct: 444 DSVESALEIYHKMKRKKRQPDCNTYA--PLIQCLCRARRVDEAKEFLDVMEADNVVP--- 498
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP----------------------- 157
N + + + C QG +A V + E C P
Sbjct: 499 --NGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASK 556
Query: 158 ---------DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
D +++ + ++CK G EA E+ +M KGV PDE TY ++ + ++
Sbjct: 557 LLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLD 616
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
RV+ F KM G P L Y L+G+ M DEA F+ MV + +
Sbjct: 617 RVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMR 676
Query: 268 FMMKALSDGGKLD 280
+ L D G D
Sbjct: 677 TLSSCLRDAGYQD 689
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N + V+ + + R ++A + ++ E C P+ + + +I+ CK G + +A EL
Sbjct: 75 NAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELL 134
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM ++GV D + L+ R+D+ F+ M + PN+ YN +V L +
Sbjct: 135 DEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKA 193
Query: 243 GMLDEAKSFFDIMVKK------LKMDDASYKFMMKALSDGGKLDEILE 284
+DEA FD M K+ + D SY ++ AL ++D+ E
Sbjct: 194 NRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYE 241
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 53/109 (48%)
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EA L E + P+E Y +++ + +VD +M + G++ ++ +++ L+
Sbjct: 94 EAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLI 153
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
L + G +DEA F M ++ + +Y ++ L ++DE LE+
Sbjct: 154 QGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALEL 202
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 144/284 (50%), Gaps = 10/284 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V +S L+ F R G D E++ G+V DGV+Y ++ G+ G+
Sbjct: 229 RGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR--CFGLVPDGVIYTMVIGGFCRAGLM 286
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A+ +E VG V N++L+ LC + +A L + M+ PP +
Sbjct: 287 SDALRVRDEMVG--CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPP-----D 339
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +F + GYC +G+ A+++F M R PD +++N LID +C+ G L +A +L+
Sbjct: 340 LCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWD 399
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M + + P+ TY +L+D+ E +V+D + +M++ G+ PN+ YN ++ + G
Sbjct: 400 DMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 459
Query: 244 MLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+ + + F +MV K+ D +Y ++ K+ + +++
Sbjct: 460 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 503
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 147/309 (47%), Gaps = 12/309 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V Y+ ++ G R G D + +F+E+ + GV D + L+ G+
Sbjct: 156 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD--FGVAPDVRSFTILIGGFCRV 213
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA++ Y E + +K V+ + ++ GK D A+ M+ P +
Sbjct: 214 GEIEEALKIYKEM--RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 271
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ G+C G DA+ V +M C PD +++N L++ LCK L +AE
Sbjct: 272 I-----YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 326
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L EM ++GV PD T+ L+ C E ++D F M++ LRP++ YN L+ +
Sbjct: 327 LLNEMRERGVPPDLCTFTTLIHGYCIE-GKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 385
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ G LD+A +D M +++ + +Y ++ + + G++++ + +++ G +
Sbjct: 386 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 445
Query: 299 EELQEFVKG 307
+KG
Sbjct: 446 MTYNSIIKG 454
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 134/279 (48%), Gaps = 12/279 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGME 63
G V D V+Y+ ++ GF R G R+ +E+ +G G + D V Y +L+ G +
Sbjct: 265 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM---VGCGCLPDVVTYNTLLNGLCKERRL 321
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A NE V +++ C GK D+AL+LFD M N+ RL +
Sbjct: 322 LDAEGLLNEM--RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ-----RLRPD 374
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + DG C QG A +++ M P+ ++++ LID C+ G + +A
Sbjct: 375 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 434
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +KG+ P+ TY ++ V G + +KM+ + + P+L YN L+ ++
Sbjct: 435 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 494
Query: 244 MLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDE 281
+ +A ++M K K++ D +Y ++ S G + E
Sbjct: 495 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 533
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
G + D V Y+ L+ G ++ D++G L E++E+ GV D + +L+ GY ++G
Sbjct: 300 GCLPDVVTYNTLLNGLCKERRLLDAEG---LLNEMRER--GVPPDLCTFTTLIHGYCIEG 354
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP---- 117
++A++ ++ + N ++ V N+++D +C G D+A L+D M + P
Sbjct: 355 KLDKALQLFDTML--NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVT 412
Query: 118 --------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
K + N+ ++N + GYC G + +KM
Sbjct: 413 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 472
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN-RV 210
+ SPD +++N LI K + +A +L M + V PD TY +L++ F V+ V
Sbjct: 473 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLING-FSVHGNV 531
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+ F KM G+ P+ Y ++ V G EA D M+++
Sbjct: 532 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 579
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 43/275 (15%)
Query: 43 VVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE 102
V D V + ++ F G E AM + V + +K V NSVL LC +G +D+
Sbjct: 126 VFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSK--GLKPGIVTYNSVLKGLCRSGMWDK 183
Query: 103 ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
A ++F M + P ++ SF ++ G+C G ++A++++++M PD +SF
Sbjct: 184 AWEVFKEMDDFGVAP-----DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSF 238
Query: 163 NNLI---------DQ--------------------------LCKNGMLAEAEELYGEMSD 187
+ LI D C+ G++++A + EM
Sbjct: 239 SCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVG 298
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G PD TY L++ + R+ D +M + G+ P+L + L+ G LD+
Sbjct: 299 CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK 358
Query: 248 AKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDE 281
A FD M+ ++L+ D +Y ++ + G LD+
Sbjct: 359 ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 393
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 5/181 (2%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E V V +N ++DA G + A+ L D M + K L + ++N + G C
Sbjct: 122 EKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVS-----KGLKPGIVTYNSVLKGLC 176
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
G + A EVF++M ++ +PD SF LI C+ G + EA ++Y EM +G+ PD
Sbjct: 177 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLV 236
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
++ L+ ++D Y R+M GL P+ +Y ++G + G++ +A D M
Sbjct: 237 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 296
Query: 256 V 256
V
Sbjct: 297 V 297
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 43/213 (20%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC-------------------------- 155
VN + N+M YC F V +M E RC
Sbjct: 93 VNTYTLNIMVHNYCKALEFDKVDAVISEM-EKRCVFPDVVTHNVMVDARFRAGDAEAAMA 151
Query: 156 ----------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
P +++N+++ LC++GM +A E++ EM D GV PD ++ +L+
Sbjct: 152 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 211
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDA 264
V +++ +++M G++P+L ++ L+G + G +D A ++ ++ L D
Sbjct: 212 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 271
Query: 265 SYKFMMKALSDGGKLDEIL----EIVG-GILDD 292
Y ++ G + + L E+VG G L D
Sbjct: 272 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD 304
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 157/324 (48%), Gaps = 9/324 (2%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G+ D V Y+ L+ ++G + LF+ + V D + Y +L+ G+
Sbjct: 141 MPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRV 200
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EAM+ + + + + V NS+L L DEA ++F +M + P
Sbjct: 201 EKTDEAMKLFKDVIAKGYMP--DTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAP--- 255
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +++++ G+C G +E++ +M E R SPD L N +ID LCK + +A +
Sbjct: 256 --NGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHK 313
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EMS G PD TY +L+D + N VD F MVD+G P++ Y+ ++ L
Sbjct: 314 VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLC 373
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ + +A+ FD M+ +KL D ++ +M L GKLDE +++ + + +
Sbjct: 374 KTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGV 433
Query: 300 ELQEFVKGELSKEGREEEVVKLME 323
+ G L ++ R +E V+L +
Sbjct: 434 TCTTLMHG-LCRDKRTDEAVRLFQ 456
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 157/356 (44%), Gaps = 38/356 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ KG++ D V Y+ ++LG R + D +F+++ + G +G Y ++ G+
Sbjct: 213 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVD--SGCAPNGATYSIVLSGHCRV 270
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +E Y E + S + N+V+D LC K D+A K+ + M P +
Sbjct: 271 GNMARCLELYEEMTEKRFSP--DVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVV 328
Query: 121 AVNL------------------------------GSFNVMADGYCGQGRFKDAIEVFRKM 150
N+ S++V+ +G C + DA +F +M
Sbjct: 329 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 388
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E + PD ++FN L+D LCK G L EA++L MS+ V PD T LM R
Sbjct: 389 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRT 448
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK---KLKMDDASYK 267
D+ F+ MV+ G ++ +N ++ L + G L +A FF MVK + D +Y
Sbjct: 449 DEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYT 508
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
++ AL + G++D+ ++ + G + G L K+GR + +L +
Sbjct: 509 TLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNG-LRKQGRHIQADRLTQ 563
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 12/285 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF D V YS ++ G + G + EE+ EK GV D Y ++ G
Sbjct: 4 KGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEK--GVNPDVATYTIIVDRLCRAGKV 61
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA E +++ + S + VA N++++ LC + + A KL + M ++ P +
Sbjct: 62 DEADELFHKMIERGCSA--NTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNI--- 116
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + G C G+ +A + F M SPD +++N L+D L K G +AEA L+
Sbjct: 117 --TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFK 174
Query: 184 --EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+M+D+ V PD TY L+D V + D+ F+ ++ G P+ YN ++ L +
Sbjct: 175 TMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR 234
Query: 242 VGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+DEA+ F MV + A+Y ++ G + LE+
Sbjct: 235 KSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLEL 279
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 8/213 (3%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V ++++ LC GK EAL++ + M + P ++ ++ ++ D C G+ +A
Sbjct: 10 VVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNP-----DVATYTIIVDRLCRAGKVDEA 64
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
E+F KM E CS +T+++N LI+ LCK+ + A +L EM+ KG PD TY ++
Sbjct: 65 DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF---DIMVKKLK 260
+ +V + +F M G P++ YN L+ L + G + EA F D+ +K+
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
D +Y ++ K DE +++ ++ G
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKG 217
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 114/256 (44%), Gaps = 11/256 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V D V Y+ L+ G + D LF + + G D V Y ++ G
Sbjct: 322 GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD--NGCAPDIVSYSVVLNGLCKTNKVH 379
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A ++ + E V V N ++D LC GK DEA L D M +EHN + +
Sbjct: 380 DARVLFDRMI-ERKLVP-DVVTFNILMDGLCKAGKLDEAKDLLDVM-SEHN----VLPDG 432
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ + G C R +A+ +F+ M E D L N ++ LC+ G LA+A +
Sbjct: 433 VTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKS 492
Query: 185 M--SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M SD +PD TY L++A E RVD YF++M SG P+ YN L+ L +
Sbjct: 493 MVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQ 552
Query: 243 GMLDEAKSFFDIMVKK 258
G +A M +K
Sbjct: 553 GRHIQADRLTQAMKEK 568
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M E PD ++++ +I LCK G + EA E+ EM++KGVNPD TY +++D +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
VD+ F KM++ G N YN L+ L + ++ A + M K + D+ +Y
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 269 MMKALSDGGKLDE 281
++ L GK+ E
Sbjct: 121 ILSGLCRMGKVSE 133
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 144/284 (50%), Gaps = 10/284 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V +S L+ F R G D E++ G+V DGV+Y ++ G+ G+
Sbjct: 290 RGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR--CFGLVPDGVIYTMVIGGFCRAGLM 347
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A+ +E VG V N++L+ LC + +A L + M+ PP +
Sbjct: 348 SDALRVRDEMVG--CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPP-----D 400
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +F + GYC +G+ A+++F M R PD +++N LID +C+ G L +A +L+
Sbjct: 401 LCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWD 460
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M + + P+ TY +L+D+ E +V+D + +M++ G+ PN+ YN ++ + G
Sbjct: 461 DMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 520
Query: 244 MLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+ + + F +MV K+ D +Y ++ K+ + +++
Sbjct: 521 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 564
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 147/309 (47%), Gaps = 12/309 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V Y+ ++ G R G D + +F+E+ + GV D + L+ G+
Sbjct: 217 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD--FGVAPDVRSFTILIGGFCRV 274
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA++ Y E + +K V+ + ++ GK D A+ M+ P +
Sbjct: 275 GEIEEALKIYKEM--RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 332
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ G+C G DA+ V +M C PD +++N L++ LCK L +AE
Sbjct: 333 I-----YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 387
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L EM ++GV PD T+ L+ C E ++D F M++ LRP++ YN L+ +
Sbjct: 388 LLNEMRERGVPPDLCTFTTLIHGYCIE-GKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 446
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ G LD+A +D M +++ + +Y ++ + + G++++ + +++ G +
Sbjct: 447 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 506
Query: 299 EELQEFVKG 307
+KG
Sbjct: 507 MTYNSIIKG 515
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 134/279 (48%), Gaps = 12/279 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGME 63
G V D V+Y+ ++ GF R G R+ +E+ +G G + D V Y +L+ G +
Sbjct: 326 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM---VGCGCLPDVVTYNTLLNGLCKERRL 382
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A NE V +++ C GK D+AL+LFD M N+ RL +
Sbjct: 383 LDAEGLLNEM--RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ-----RLRPD 435
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + DG C QG A +++ M P+ ++++ LID C+ G + +A
Sbjct: 436 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 495
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +KG+ P+ TY ++ V G + +KM+ + + P+L YN L+ ++
Sbjct: 496 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 555
Query: 244 MLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDE 281
+ +A ++M K K++ D +Y ++ S G + E
Sbjct: 556 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 594
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
G + D V Y+ L+ G ++ D++G L E++E+ GV D + +L+ GY ++G
Sbjct: 361 GCLPDVVTYNTLLNGLCKERRLLDAEG---LLNEMRER--GVPPDLCTFTTLIHGYCIEG 415
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP---- 117
++A++ ++ + N ++ V N+++D +C G D+A L+D M + P
Sbjct: 416 KLDKALQLFDTML--NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVT 473
Query: 118 --------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
K + N+ ++N + GYC G + +KM
Sbjct: 474 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 533
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN-RV 210
+ SPD +++N LI K + +A +L M + V PD TY +L++ F V+ V
Sbjct: 534 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLING-FSVHGNV 592
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+ F KM G+ P+ Y ++ V G EA D M+++
Sbjct: 593 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 640
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 43/275 (15%)
Query: 43 VVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE 102
V D V + ++ F G E AM + V + +K V NSVL LC +G +D+
Sbjct: 187 VFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSK--GLKPGIVTYNSVLKGLCRSGMWDK 244
Query: 103 ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
A ++F M + P ++ SF ++ G+C G ++A++++++M PD +SF
Sbjct: 245 AWEVFKEMDDFGVAP-----DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSF 299
Query: 163 NNLI---------DQ--------------------------LCKNGMLAEAEELYGEMSD 187
+ LI D C+ G++++A + EM
Sbjct: 300 SCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVG 359
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G PD TY L++ + R+ D +M + G+ P+L + L+ G LD+
Sbjct: 360 CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK 419
Query: 248 AKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDE 281
A FD M+ ++L+ D +Y ++ + G LD+
Sbjct: 420 ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 454
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 5/181 (2%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E V V +N ++DA G + A+ L D M + K L + ++N + G C
Sbjct: 183 EKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVS-----KGLKPGIVTYNSVLKGLC 237
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
G + A EVF++M ++ +PD SF LI C+ G + EA ++Y EM +G+ PD
Sbjct: 238 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLV 297
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
++ L+ ++D Y R+M GL P+ +Y ++G + G++ +A D M
Sbjct: 298 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 357
Query: 256 V 256
V
Sbjct: 358 V 358
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 101/221 (45%), Gaps = 9/221 (4%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V Y+ L+ G R GD D L++++ + + + V Y L+ + KG E+A
Sbjct: 434 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR--EIFPNHVTYSILIDSHCEKGQVEDAF 491
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+E + N + + + NS++ C +G + K +M P +L ++
Sbjct: 492 GFLDEMI--NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSP-----DLITY 544
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + GY + + DA ++ M + + PD +++N LI+ +G + EA ++ +M
Sbjct: 545 NTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 604
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
KG+ PD YTY +++ + +M+ G P+
Sbjct: 605 KGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 43/213 (20%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC-------------------------- 155
VN + N+M YC F V +M E RC
Sbjct: 154 VNTYTLNIMVHNYCKALEFDKVDAVISEM-EKRCVFPDVVTHNVMVDARFRAGDAEAAMA 212
Query: 156 ----------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
P +++N+++ LC++GM +A E++ EM D GV PD ++ +L+
Sbjct: 213 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDA 264
V +++ +++M G++P+L ++ L+G + G +D A ++ ++ L D
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 332
Query: 265 SYKFMMKALSDGGKLDEIL----EIVG-GILDD 292
Y ++ G + + L E+VG G L D
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD 365
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + V YS L+ G + F +E+ K G++ + + Y S++KGY
Sbjct: 462 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK--GILPNIMTYNSIIKGYCRS 519
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + + + + S + + N+++ K +A KL + M+ E P
Sbjct: 520 GNVSKGQKFLQKMMVNKVSPDL--ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP--- 574
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N++ +G+ G ++A +F KM PD ++ ++I+ G EA +
Sbjct: 575 --DVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQ 632
Query: 181 LYGEMSDKGVNPDE 194
L+ EM +G PD+
Sbjct: 633 LHDEMLQRGFAPDD 646
>gi|255660978|gb|ACU25658.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 373
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 140/282 (49%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +KE G V D + YG L+ G+ G ++++
Sbjct: 62 FNXMMRGLFDNGKVDEVISIWELMKES--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D A+ + + M P N+ +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP-----NVHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA L E+ DKG++P
Sbjct: 173 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF- 251
TY +LM + V+ + ++ G +P++ ++N L+ L VG + A S
Sbjct: 233 GVITYSMLMXGLCLDHXVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLX 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 130/281 (46%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++G D + E+ E+ GGV+ D Y +++ G + +
Sbjct: 89 GFVEDSITYGILVHGFCKNGYIDKSLHVL-EMAEQKGGVL-DAFAYSAMINGLCKEANLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ N + S K + N++++ L KF++A+++F M H P +
Sbjct: 147 RAVSVLNGMI--KSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTII---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C F +A + +++ + P ++++ L+ LC + + A +L+ +
Sbjct: 201 -TYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMXGLCLDHXVERALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + M PNL +N L+ + G
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLXFDMNRWKCAPNLVSHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY ++ L ++ D IL
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAIL 360
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 11/226 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y E V S V AV N++L+ K + +L++ M +E N ++ SFN
Sbjct: 13 YKEIV--ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNX 64
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G G+ + I ++ M E D++++ L+ CKNG + ++ + KG
Sbjct: 65 MMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124
Query: 190 VNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D + Y +++ C E N +D + M+ SG +PN+ VYN L+ LV ++A
Sbjct: 125 GVLDAFAYSAMINGLCKEAN-LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDA 183
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F ++ +Y ++ L E +V +LD G
Sbjct: 184 IRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKG 229
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ +M F+ +VD+ + + M +SG + Y LV + G +D++ ++
Sbjct: 60 SSFNXMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD + ++ G++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSG 159
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNXM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAEQK 123
>gi|255660954|gb|ACU25646.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 375
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 141/282 (50%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +KE G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKES--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D AL + + M P N+ +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKP-----NVHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCK M EA L E+ DKG++P
Sbjct: 173 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLDP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKYAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 132/281 (46%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++G D + E+ E+ GGV+ D Y +++ G + +
Sbjct: 89 GFVEDSITYGILVHGFCKNGYIDKSLHVL-EMAEQKGGVL-DAFAYSAMINGLCKEANLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ N + S K + N++++ L KF++A+++F M H P +
Sbjct: 147 RALYVLNGMI--KSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTII---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C + F +A + +++ + P ++++ L+ LC + + A +L+ +
Sbjct: 201 -TYNTLINGLCKKEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + + M PNL +N L+ + G
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKYAPNLVSHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY +K L ++ D IL
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 11/271 (4%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+++E+ E V D VVY +++ GYF ++ E + E +G + +S
Sbjct: 4 GDIDGAERVYKEIVES--KVSPDAVVYNAMLNGYFRVAKIKDCFELW-EMMGSEGNRSVS 60
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ N ++ L +NGK DE + +++ MK + ++ ++ G+C G +
Sbjct: 61 SF--NIMMRGLFDNGKVDEVISIWELMKESGFVEDSI-----TYGILVHGFCKNGYIDKS 113
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ V + D +++ +I+ LCK L A + M G P+ + Y L++
Sbjct: 114 LHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLING 173
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMD 262
++ +D FR+M P + YN L+ L + M EA + +++ K L
Sbjct: 174 LVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLDPG 233
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y +MK L K++ L++ + G
Sbjct: 234 VITYSMLMKGLCLDHKVERALQLWNQVTSKG 264
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY+ L+ G V + R+F E+ + Y +L+ G K M EA
Sbjct: 166 VYNTLINGLVGASKFEDAIRVFREMGTM--HCSPTIITYNTLINGLCKKEMFGEAYNLVK 223
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E + + + + + ++ LC + K + AL+L++++ ++ P ++ N++
Sbjct: 224 ELL--DKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKP-----DVQMHNILI 276
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G C G+ + A+ ++ M ++ +P+ +S N L++ K+G + A ++ + G+
Sbjct: 277 HGLCSVGKMQLALSLYFDMNRWKYAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLE 336
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
PD +Y + + NR+ D + V
Sbjct: 337 PDIISYNITLKGLCSCNRISDAILFLHDAV 366
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M +SG + Y LV + G +D++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD L ++ G++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSG 159
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAEQK 123
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 155/313 (49%), Gaps = 10/313 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ ++ GF G + RLF+E+ + V+ D V + L+ G +
Sbjct: 262 MVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGR--NVMPDTVTFNILVDGLCKE 319
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM EA C +E + E + + +A N+++D C + + DEA+K+ M K
Sbjct: 320 GMVSEA-RCVSETMTEKGA-EPNAYTYNALMDGYCLHNQMDEAIKVLGIMIG-----KGC 372
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A NL S+N++ +GYC R +A + +M E +PDT++++ L+ LC+ G EA
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALN 432
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM G+ PD Y +L+D + +D+ ++M + ++PN+ +Y L+ +
Sbjct: 433 LFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMF 492
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
G L+ AK F + ++ D +Y M+K L G DE E + DDG + S
Sbjct: 493 IAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSC 552
Query: 300 ELQEFVKGELSKE 312
++G L +
Sbjct: 553 SYNVIIQGFLQNQ 565
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 157/330 (47%), Gaps = 12/330 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF G D + ++ L+ G +G LF E+ G + + Y +++ G
Sbjct: 157 MFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMV--WSGHEPNVISYNTVINGLCKN 214
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A+ + + E + K + V N+++D+LC + +EA++ M + PP
Sbjct: 215 GNTIMAVRVFRKM--EQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP--- 269
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N + G+C G+ +A +F++M PDT++FN L+D LCK GM++EA
Sbjct: 270 --DVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARC 327
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M++KG P+ YTY LMD N++D+ M+ G PNL+ YN L+
Sbjct: 328 VSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYC 387
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ ++EAK M +K L D +Y +M+ L G+ E L + + G +
Sbjct: 388 KSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLM 447
Query: 300 ELQEFVKGELSKEGREEEVVKLM-EKKERE 328
+ G K G +E +KL+ E ER
Sbjct: 448 AYSILLDG-FCKHGHLDEALKLLKEMHERR 476
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 150/317 (47%), Gaps = 11/317 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ +D + E+ ++ G+ D V Y +++ G+ G EA +
Sbjct: 237 VTYNTIIDSLCKDRLVNEAVEFLSEMVDR--GIPPDVVTYNTILHGFCSLGQLNEATRLF 294
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E VG N V V N ++D LC G EA + + M + P N ++N +
Sbjct: 295 KEMVGRN--VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEP-----NAYTYNAL 347
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DGYC + +AI+V M C+P+ S+N LI+ CK+ + EA+ L EMS+K +
Sbjct: 348 MDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNL 407
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-K 249
PD TY LM +V R + F++M SGL P+L Y+ L+ + G LDEA K
Sbjct: 408 TPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK 467
Query: 250 SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
++ +++K + Y +++ + GKL+ E+ + DG +KG L
Sbjct: 468 LLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKG-L 526
Query: 310 SKEGREEEVVKLMEKKE 326
KEG +E + K E
Sbjct: 527 LKEGLSDEAYEFFRKME 543
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 2/218 (0%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ S NV+ + C A+ V KM + PD ++FN LI+ LC G + EA L+
Sbjct: 130 NVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLF 189
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM G P+ +Y +++ + FRKM + +PN+ YN ++ L +
Sbjct: 190 NEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKD 249
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+++EA F MV + + D +Y ++ G+L+E + ++ + +
Sbjct: 250 RLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTF 309
Query: 302 QEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
V G L KEG E + E + AE A A
Sbjct: 310 NILVDG-LCKEGMVSEARCVSETMTEKGAEPNAYTYNA 346
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 99/232 (42%), Gaps = 34/232 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + Y+ L+ G+ + + RL E+ EK + D V Y +LM+G
Sbjct: 367 MIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEK--NLTPDTVTYSTLMQGLCQV 424
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-- 118
G EA+ + E +S + +A + +LD C +G DEALKL M P
Sbjct: 425 GRPREALNLFKEMC--SSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNII 482
Query: 119 -------------RLAV---------------NLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+L V ++ ++NVM G +G +A E FRKM
Sbjct: 483 LYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKM 542
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
+ PD+ S+N +I +N + A +L EM K + D T+ +L+D
Sbjct: 543 EDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Query: 96 NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
N+ D+AL F RM + P+ V G F + ++ A+ + +M +
Sbjct: 73 NDISIDDALTSFYRMVRMN--PRPSVVEFGKF---LGSIAKKKQYSSAVSLCNQMDLFGV 127
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+ + S N LI+ LC+ + A + G+M G+ PD T+ L++ ++ +
Sbjct: 128 THNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVG 187
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALS 274
F +MV SG PN+ YN ++ L + G A F M + + K + +Y ++ +L
Sbjct: 188 LFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLC 247
Query: 275 DGGKLDEILEIVGGILDDG 293
++E +E + ++D G
Sbjct: 248 KDRLVNEAVEFLSEMVDRG 266
>gi|294462101|gb|ADE76603.1| unknown [Picea sitchensis]
Length = 290
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 147/279 (52%), Gaps = 13/279 (4%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
L+ E++ + G + S+ V + +L+ G+F G +A++ ++ + + ++ N+V+
Sbjct: 7 LYMEMRRR-GSIFSEPV-FCNLIGGFFKAGEIYKALDVFHFI---PEKFERTVMSYNAVM 61
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
D C G+ EAL+ D++ P L N S+ ++ GY QG+ ++A ++FR M
Sbjct: 62 DGFCKAGQLQEALQYLDKL-----PENNLGPNATSYTILISGYITQGKLQEAEKLFRSMA 116
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
E C PD +N L+D K GM AEAE+L EM + PD TY +L++ + +++
Sbjct: 117 EKGCIPDACVYNTLLDAYFKEGMFAEAEKLLEEMVTEHREPDSVTYTMLINEFTKQGKME 176
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMM 270
F M+++GL+P++ VYN+ G L + DEA+ F MV + D +Y +
Sbjct: 177 GALKIFANMIEAGLKPDVTVYNKWFGLLCKESKFDEAQKLFQRMVDGGQNPDVGTYDILT 236
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
+ G+ +E ++ IL+ G + SEEL + G+L
Sbjct: 237 EGFGQEGRAEEAKKLFRDILEKGNL--SEELVALLAGKL 273
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 44/212 (20%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ L+ G++ G +LF + EK G + D VY +L+ YF +GM
Sbjct: 92 YTILISGYITQGKLQEAEKLFRSMAEK--GCIPDACVYNTLLDAYFKEGM---------- 139
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
F EA KL + M EH P + ++ ++ +
Sbjct: 140 ---------------------------FAEAEKLLEEMVTEHREPDSV-----TYTMLIN 167
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
+ QG+ + A+++F M E PD +N LCK EA++L+ M D G NP
Sbjct: 168 EFTKQGKMEGALKIFANMIEAGLKPDVTVYNKWFGLLCKESKFDEAQKLFQRMVDGGQNP 227
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
D TY +L + + R ++ FR +++ G
Sbjct: 228 DVGTYDILTEGFGQEGRAEEAKKLFRDILEKG 259
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + D VY+ L+ + ++G +L EE+ + D V Y L+ + +G
Sbjct: 118 KGCIPDACVYNTLLDAYFKEGMFAEAEKLLEEMVTE--HREPDSVTYTMLINEFTKQGKM 175
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A++ + + + +K N LC KFDEA KLF RM + P +
Sbjct: 176 EGALKIFANMI--EAGLKPDVTVYNKWFGLLCKESKFDEAQKLFQRMVDGGQNP-----D 228
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
+G+++++ +G+ +GR ++A ++FR + E
Sbjct: 229 VGTYDILTEGFGQEGRAEEAKKLFRDILE 257
>gi|357498031|ref|XP_003619304.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494319|gb|AES75522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 805
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 160/360 (44%), Gaps = 42/360 (11%)
Query: 2 FVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
F G+ + + + L+ G +G + LF + LG + + V YG L+ G G
Sbjct: 253 FKMGYEPNTITLTTLIKGLCLNGKVNEAL-LFHDHVLALGFHL-NHVTYGILINGLCKMG 310
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP---- 117
A++ + G+ V + V ++V+D LC + +A L+ M + PP
Sbjct: 311 QTRAALQVLRQIEGK--LVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVKRIPPTVVT 368
Query: 118 ------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM--------GEYRCSP 157
K + N+ +FN++ D C G+ K+A V KM E C P
Sbjct: 369 FKAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKP 428
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
+T+S+N LID CK+G L+ A +L +M D+G P+ TY L+ A + + VD
Sbjct: 429 NTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALV 488
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDG 276
D G++P++ YN LV L + G L +A+ F D+++K + +Y M+ L
Sbjct: 489 NNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLE 548
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKARE 336
G LDE ++ + D+G I Q + L EK E +KAE RE
Sbjct: 549 GLLDEAETLLSKMEDNGCIPDVVTYQTIIHA-------------LFEKDENDKAEKLVRE 595
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 9 DPVVYSYLML--GFVRDGD-----------SDGVFRLFEELKEKLGGVVSDGVVYGSLMK 55
+P VY++ +L +DG D LF E+ K + V Y +L+
Sbjct: 384 NPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCK-----PNTVSYNTLID 438
Query: 56 GYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
G+ G A + ++ + + + NS+L ALC N D+A+ L + K++
Sbjct: 439 GFCKSGRLSHAWKLLDQM--RDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGI 496
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P ++ ++N + DG C QGR KDA +F+ + + T ++N +I+ LC G+L
Sbjct: 497 QP-----DMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGLL 551
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
EAE L +M D G PD TY ++ A FE + D R+++
Sbjct: 552 DEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVRELI 597
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 37/231 (16%)
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPK-------RLAV-NLGSFNVMADGYCGQGRFKDAI 144
A C+N D L ++ PP RL V N F + +G+ +A+
Sbjct: 139 ASCSNFWLD----LNRSHHHQQVPPSPLSNAVLRLTVQNCSHFRSIPNGFV----VDNAV 190
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKN-GMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
F +M + R +P + FN ++ L K L +M KGV PD +T +L++
Sbjct: 191 LSFNRMLQMRHTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINC 250
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMD 262
Y+ KM G PN L+ L G ++EA F D ++ ++
Sbjct: 251 ------------YYFKM---GYEPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLN 295
Query: 263 DASYKFMMKALSDGGK----LDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
+Y ++ L G+ L + +I G +++ + +S + K +L
Sbjct: 296 HVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKL 346
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 151/315 (47%), Gaps = 14/315 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y+ ++ G+ G D RL E+ V D Y +L++G +G A+
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAARRLVAEMP-----VEPDAYTYNTLIRGLCGRGRTANALA 179
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+E + + V +L+A C + +A+KL D M+++ P ++ ++N
Sbjct: 180 VLDEMLRRRCVPDV--VTYTILLEATCKRSGYKQAMKLLDEMRDKGCTP-----DIVTYN 232
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
V+ +G C +GR DAIE + + Y C P+T+S+N ++ LC +AEEL GEM K
Sbjct: 233 VVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK 292
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G P+ T+ +L+ V+ ++ G PN YN L+ + +D+A
Sbjct: 293 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA 352
Query: 249 KSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+F D+MV + D SY ++ AL G++D +E++ + D G + G
Sbjct: 353 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 412
Query: 308 ELSKEGREEEVVKLM 322
L+K G+ +E ++L+
Sbjct: 413 -LTKAGKTKEALELL 426
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 126/268 (47%), Gaps = 10/268 (3%)
Query: 34 EELKEKLG--GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
EEL ++G G + V + L+ KG+ E A+E + ++++ N +L
Sbjct: 283 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI--PKYGCTPNSLSYNPLL 340
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
A C K D+A+ D M + P ++ S+N + C G A+E+ ++
Sbjct: 341 HAFCKQKKMDKAMAFLDLMVSRGCYP-----DIVSYNTLLTALCRSGEVDVAVELLHQLK 395
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ C+P +S+N +ID L K G EA EL EM KG+ PD TY + +R++
Sbjct: 396 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 455
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM-DDASYKFMM 270
D F K+ D G+RPN +YN ++ L + A F M+ M ++++Y ++
Sbjct: 456 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFS 298
+ L+ G + E +++ + G + S
Sbjct: 516 EGLAYEGLIKEARDLLDELCSRGVVRKS 543
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ R G+ D L +LK+K G + Y +++ G
Sbjct: 359 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK--GCAPVLISYNTVIDGLTKA 416
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+E NE V + ++ + +++ LC + ++A++ F ++++ P
Sbjct: 417 GKTKEALELLNEMVSKG--LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP--- 471
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +N + G C + AI++F M C P+ ++ LI+ L G++ EA +
Sbjct: 472 --NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 529
Query: 181 LYGEMSDKGV 190
L E+ +GV
Sbjct: 530 LLDELCSRGV 539
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 11/323 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + D + + L+ GF + G + R+ E +++ G V D + Y L+ G
Sbjct: 110 MVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED--SGAVPDVITYNVLISGMCST 167
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + + V S S V N +++ LC G A+ + ++M P L
Sbjct: 168 GRWMDAEKLLADMVRRGCSP--SVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSL 225
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
S+N + G+C + + + AIE KM C PD +++N L+ LCK+G + A E
Sbjct: 226 -----SYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVE 280
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L ++S KG +P TY ++D +V + D A +M GL+P++ Y+ LVG L
Sbjct: 281 LLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLS 340
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G +DEA FF D+ V +K + +Y +M L K D ++ + ++ G
Sbjct: 341 REGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEA 400
Query: 300 ELQEFVKGELSKEGREEEVVKLM 322
++G L+ EG +E ++L+
Sbjct: 401 SYTILIEG-LAYEGLAKEALELL 422
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 9/190 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ +DG D L +L K G + Y +++ G
Sbjct: 250 MTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSK--GCSPVLITYNTVIDGLSKV 307
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A + +E + +K + +S++ L GK DEA+K F ++ P
Sbjct: 308 GKTDQAAKLLDEMRAKG--LKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKP--- 362
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++N + G C + AI+ M + C P S+ LI+ L G+ EA E
Sbjct: 363 --NAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALE 420
Query: 181 LYGEMSDKGV 190
L E+ +GV
Sbjct: 421 LLNELCLRGV 430
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 79/202 (39%), Gaps = 8/202 (3%)
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L S + + +G+ G G ++ + + + + NN + +L +NG L E
Sbjct: 55 LQSLDKLPNGHLGNGHV--SLSPIHSLTNF----EEIESNNNLSKLVRNGELEEGFRFLE 108
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +G PD L+ ++ + + DSG P++ YN L+ + G
Sbjct: 109 SMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTG 168
Query: 244 -MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+D K D++ + ++ ++ L G L ++++ + G S
Sbjct: 169 RWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYN 228
Query: 303 EFVKGELSKEGREEEVVKLMEK 324
+ G KE + E ++ + K
Sbjct: 229 PLLHG-FCKEKKMERAIEYLGK 249
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 163/357 (45%), Gaps = 36/357 (10%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y+ ++ G G + RLF+++++K G D V Y +++ +
Sbjct: 332 QGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQK--GCKPDVVAYNTIIDSLCKDRLV 389
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV- 122
+AME +E V + + +AV +++L CN G+ DEA +LF M + P L
Sbjct: 390 NDAMEFLSEMV--DRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFS 447
Query: 123 -----------------------------NLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
N+ ++N + +GYC + + +A +VF M
Sbjct: 448 ILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGK 507
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
C+PD S+N LI+ C + + +A+ L +MS K + P+ TY +M V R+ D
Sbjct: 508 GCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDA 567
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKA 272
F+KM SG+ P L Y+ L+ L + G LDEA F M KKL+ D Y +++
Sbjct: 568 QELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEG 627
Query: 273 LSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREK 329
+ GGKL+ + + DG +KG L KEG +E +L K + K
Sbjct: 628 MFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKG-LLKEGLSDEAYELFRKWKMMK 683
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 153/322 (47%), Gaps = 38/322 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + Y+ L+ G G+++ +F+++++ G + V Y +++
Sbjct: 189 MVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQ--NGCKPNVVTYNTIIDSLCKD 246
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ +AM+ +E VG + A+ NS++ LC G+ +EA +LF RM+ P +
Sbjct: 247 RLVNDAMDFLSEMVGR--GIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVV 304
Query: 121 AVNL------------------------------GSFNVMADGYCGQGRFKDAIEVFRKM 150
N+ ++ + G C G+ +AI +F+KM
Sbjct: 305 TYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKM 364
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+ C PD +++N +ID LCK+ ++ +A E EM D+G+ P+ TY ++ + ++
Sbjct: 365 EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQL 424
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
D+ F++MV + PN ++ LV L Q GM+ EA+ F+ M +K ++ + +Y +
Sbjct: 425 DEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNAL 484
Query: 270 MKALSDGGKLDE---ILEIVGG 288
M K++E + EI+ G
Sbjct: 485 MNGYCLRCKMNEARKVFEIMVG 506
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 137/268 (51%), Gaps = 12/268 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ D + + +L+ G +G + A+E YNE V S + ++ N++++ LCN+G +
Sbjct: 158 GIQPDVITFTTLINGVCNEGKIKVAVELYNEMV--RSGHEPDVISYNTLINGLCNSGNTN 215
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
A+ +F +M+ P N+ ++N + D C DA++ +M PD ++
Sbjct: 216 MAVHVFKKMEQNGCKP-----NVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAIT 270
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+N+++ LC G L EA L+ M G PD TY +++D+ ++ V+D A + +MV
Sbjct: 271 YNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMV 330
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
D G+ P++ Y ++ L +G L+EA F M +K K D +Y ++ +L ++
Sbjct: 331 DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVN 390
Query: 281 EILEIVGGILDDG----GIEFSEELQEF 304
+ +E + ++D G + +S L F
Sbjct: 391 DAMEFLSEMVDRGIPPNAVTYSTILHGF 418
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
S N++ + C A+ V+ KM + PD ++F LI+ +C G + A ELY EM
Sbjct: 130 SLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEM 189
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
G PD +Y L++ + F+KM +G +PN+ YN ++ L + ++
Sbjct: 190 VRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLV 249
Query: 246 DEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDE 281
++A F MV + + D +Y ++ L G+L+E
Sbjct: 250 NDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNE 286
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 7/233 (3%)
Query: 96 NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
N D+AL F RM + P+ V G F ++ + + +M +
Sbjct: 70 NTISVDDALASFYRMARMN--PRPSIVEFGKF---LGSIAKMKQYSTVVYLCNQMDLFGV 124
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+ S N LI+ LC+ + A ++G+M G+ PD T+ L++ ++
Sbjct: 125 THTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVE 184
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
+ +MV SG P++ YN L+ L G + A F M + K + +Y ++ +L
Sbjct: 185 LYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLC 244
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+++ ++ + ++ G + V G L G+ E +L ++ E+
Sbjct: 245 KDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHG-LCCLGQLNEATRLFKRMEQ 296
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + YS L+ G + G D +LF+ +KEK + D ++Y L++G F+
Sbjct: 574 MCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEK--KLEPDIILYTILIEGMFIG 631
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK-NEHN 115
G E A +++ + ++ N ++ L G DEA +LF + K +HN
Sbjct: 632 GKLEVAKGLFSKLSAD--GIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMKHN 685
>gi|255660996|gb|ACU25667.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 376
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 141/282 (50%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +K+ G V D + +G L+ G+ G +++
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKKS--GFVEDSITFGILVHGFCKNGYINKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D+A+ + + M P N +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKP-----NAHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA L E+ DKG+NP
Sbjct: 173 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGEMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 13/223 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VY+ L+ G V + R+F E+ + Y +L+ G
Sbjct: 155 MIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTM--HCSPTIITYNTLINGLCKN 212
Query: 61 GMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
M EA E + G N V + + ++ LC + K + AL+L++++ ++ P
Sbjct: 213 EMFGEAYNLVKELLDKGLNPGV----ITYSMLMKGLCLDHKVERALQLWNQVTSKGFKP- 267
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ N++ G C G + A+ ++ M ++C+P+ +S N L++ K+G + A
Sbjct: 268 ----DVQMHNILIHGLCSVGEMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNA 323
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
++ + G+ PD +Y + + NR+ D + V
Sbjct: 324 LVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAV 366
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 110/272 (40%), Gaps = 48/272 (17%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+++E+ L V D VVY +++ GYF
Sbjct: 4 GDIDGAERVYKEIV--LSKVSPDSVVYNAMLNGYF------------------------- 36
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
K + +L++ M +E N ++ SFN+M G G+ +
Sbjct: 37 ------------RVAKIKDCFELWEMMGSEGNR------SVSSFNIMMRGLFDNGKVDEV 78
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
I ++ M + D+++F L+ CKNG + ++ + KG D + Y +++
Sbjct: 79 ISIWELMKKSGFVEDSITFGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMING 138
Query: 204 -CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKM 261
C E N +D + M+ SG +PN VYN L+ LV ++A + F ++
Sbjct: 139 LCKEAN-LDKAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP 197
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y ++ L E +V +LD G
Sbjct: 198 TIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + AE +Y E+ V+PD Y +++ F V ++ D + M G R ++
Sbjct: 1 CESGDIDGAERVYKEIVLSKVSPDSVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR-SV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIV-- 286
+ +N ++ L G +DE S +++M K ++D+ ++ ++ G +++ L ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITFGILVHGFCKNGYINKSLHVLEM 119
Query: 287 ----GGILD 291
GG+LD
Sbjct: 120 AEQKGGVLD 128
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ + SPD++ +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVLSKVSPDSVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M SG + + LV + G ++++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITFGILVHGFCKNGYINKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD+ + ++ G++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSG 159
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKEIVLSKVSPDSVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + G +E S V G K G + + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKKSGFVEDSITFGILVHG-FCKNGYINKSLHVLEMAEQK 123
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 149/317 (47%), Gaps = 10/317 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G V D V++ +M GF R GD F+E++++ G+ +DGV Y +L+ G
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR--GLAADGVTYTALINGLCRA 403
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA E E+ + + AV ++D C GK EA + ++M KR+
Sbjct: 404 GELKEAERVLQEM--EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ-----KRV 456
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ ++DG C QG A E+ +M + ++N+LI+ LCK G L +A
Sbjct: 457 TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+M + G+ PD YTY ++ A + +D + ++M+D G++P + YN L+
Sbjct: 517 TMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFC 576
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
G ++ K + M++K + + +Y +MK + EI G+L +
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636
Query: 300 ELQEFVKGELSKEGREE 316
+KG +E
Sbjct: 637 TYNILIKGHCKARNMKE 653
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 10/281 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G +PV Y+ ++ +G R+ E++ + GVV D V+ ++M G+ K
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV--MHGVVLDAAVFTTVMSGFCRK 368
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A ++E + + V ++++ LC G+ EA ++ M++ K L
Sbjct: 369 GDLAAARNWFDEM--QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED-----KGL 421
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
V+ ++ V+ DGYC G+ +A V KM + R +P+ +++ L D LCK G + A E
Sbjct: 422 DVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANE 481
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM KG+ + +TY L++ + ++ M ++GL+P++ Y ++G L
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
Q LD A S M+ K +K +Y +M G+++
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 10/271 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + V Y+ L G + GD L E+ K G+ + Y SL+ G
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK--GLELNIFTYNSLINGLCKA 508
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+AM + + + +K +++ ALC + + D A L M + K +
Sbjct: 509 GNLEQAMRTMIDM--DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD-----KGI 561
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++NV+ +G+C GR + + M E P+T ++N+L+ Q C + E
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+Y M + V P+E TY +L+ + + + + +M++ G R + YN L+ L
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMM 270
+ EA+ F+ M K +L + Y F +
Sbjct: 682 KKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 28/279 (10%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K F +DPV + L+L + + RL + G S L +
Sbjct: 192 KAFSSDPVSFDLLLLCL---PSAPLLLRL-----RQYGISPSPESCNAVLCRLPL----- 238
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA++ + E +N+ + N +L ALC G+ +A +LFD M + PP +
Sbjct: 239 DEAVQLFQELPEKNT------CSYNILLKALCTAGRIKDAHQLFDEMAS---PP-----D 284
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ +M GYC + AI++ +M + +++ ++I LC G +++A +
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVE 344
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M GV D + +M + +F +M GL + Y L+ L + G
Sbjct: 345 DMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAG 404
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
L EA+ M K L +D +Y ++ GK+ E
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTE 443
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 11/223 (4%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY+Y + + + D L +E+ +K G+ V Y LM G+ M G E
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDK--GIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ +N + + NS++ C +++ M ++ P N ++
Sbjct: 586 RLLEWMLEKN--IHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP-----NENTY 638
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N++ G+C K+A+ +M E S+N LI L K EA L+ +M
Sbjct: 639 NILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
+ + + Y +D F + ++ ++V+ L ++A
Sbjct: 699 ERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSIA 741
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 163/360 (45%), Gaps = 48/360 (13%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+YS ++ +D D + L+ E+ K G+ D V Y L+ G+ + G A++
Sbjct: 199 VIYSMIIDRLCKDTLVDEAYDLYTEMVGK--GISPDVVTYSILVSGFCIVGQLNRAIDLL 256
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------------------- 111
NE V EN + ++DALC GK EA + M
Sbjct: 257 NEMVLEN--INPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYC 314
Query: 112 --NEHNPPKRL---------AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
NE N KR+ ++ +++M +G C R +A+ +F ++ + PDT+
Sbjct: 315 LVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTV 374
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++ +LID LCK+G ++ +L+ EM D+G PD TY L+DA + +D F KM
Sbjct: 375 TYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKM 434
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
D +RPN+ + L+ L +VG L A FF D++ K ++ +Y M+ L G L
Sbjct: 435 KDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLL 494
Query: 280 DEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
DE L + + D+G I + + ++ +K E +KAE RE A
Sbjct: 495 DEALALQSRMEDNGCISDAVTFEIMIRA-------------FFDKDENDKAEKLVREMIA 541
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 13/223 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D YS ++ G + D LFEE+ +K +V D V Y SL+ G
Sbjct: 333 GVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQK--NMVPDTVTYTSLIDCLCKSGRIS 390
Query: 65 EAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+ ++E + G+ V + N+++DALC NG D A+ LF++MK++ P
Sbjct: 391 YVWDLFDEMLDRGQPPDV----ITYNNLIDALCKNGHLDRAIALFNKMKDQAIRP----- 441
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ +F ++ DG C GR K+A+E F+ + + ++ +I+ LCK G+L EA L
Sbjct: 442 NVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQ 501
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
M D G D T+ +++ A F+ + D R+M+ GL
Sbjct: 502 SRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 101/189 (53%), Gaps = 6/189 (3%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+ + N+++ LC GK EAL+ D++ + ++ S+ ++ +G C G +
Sbjct: 127 NTITLNTLMKGLCLEGKVKEALRFHDKVLAQ-----GFRLSGISYGILINGVCKIGETRA 181
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
AI + R++ + P+ + ++ +ID+LCK+ ++ EA +LY EM KG++PD TY +L+
Sbjct: 182 AIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVS 241
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
V +++ +MV + P++ Y LV L + G + EA++ +MVK + +
Sbjct: 242 GFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNL 301
Query: 262 DDASYKFMM 270
D Y +M
Sbjct: 302 DVVVYSTLM 310
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 140/319 (43%), Gaps = 44/319 (13%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G + + +LMKG ++G +EA+ +++ + + ++S ++ +++ +C G+
Sbjct: 123 GYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQ--GFRLSGISYGILINGVCKIGETR 180
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
A++L R++ P N+ ++++ D C +A +++ +M SPD ++
Sbjct: 181 AAIRLLRRIERWSIRP-----NVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFE-------------- 206
++ L+ C G L A +L EM + +NPD YTY +L+DA C E
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295
Query: 207 --------------------VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
VN V++ F M G+ P++ Y+ ++ L ++ +D
Sbjct: 296 KACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVD 355
Query: 247 EAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
EA + F +I K + D +Y ++ L G++ + ++ +LD G +
Sbjct: 356 EALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLI 415
Query: 306 KGELSKEGREEEVVKLMEK 324
L K G + + L K
Sbjct: 416 DA-LCKNGHLDRAIALFNK 433
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 9/216 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D VVYS LM G+ + + R+F + + GV D Y ++ G +EA+
Sbjct: 302 DVVVYSTLMDGYCLVNEVNNAKRVFYTMTQM--GVTPDVHCYSIMINGLCKIKRVDEALN 359
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ E +N + V S++D LC +G+ LFD M + PP ++ ++N
Sbjct: 360 LFEEIHQKN--MVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPP-----DVITYN 412
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ D C G AI +F KM + P+ +F L+D LCK G L A E + ++ K
Sbjct: 413 NLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTK 472
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
G + TY ++++ + +D+ +M D+G
Sbjct: 473 GYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNG 508
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 96/201 (47%), Gaps = 6/201 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +L +L N ++ A+ L+ +M+ P + N++ + +C G+ A
Sbjct: 62 NKILISLVNVKRYPTAISLYKQMELSEVEPDYF-----TLNIIINCFCHFGQVVLAFSGV 116
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
K+ + P+T++ N L+ LC G + EA + ++ +G +YG+L++ ++
Sbjct: 117 SKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKI 176
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASY 266
R++ +RPN+ +Y+ ++ +L + ++DEA + MV K + D +Y
Sbjct: 177 GETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTY 236
Query: 267 KFMMKALSDGGKLDEILEIVG 287
++ G+L+ ++++
Sbjct: 237 SILVSGFCIVGQLNRAIDLLN 257
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA+ F M +P T FN ++ L A LY +M V PD +T +++
Sbjct: 41 DAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIII 100
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLK 260
+ +V + K++ G +PN N L+ L G + EA F D ++ + +
Sbjct: 101 NCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFR 160
Query: 261 MDDASYKFMMKALSDGGK 278
+ SY ++ + G+
Sbjct: 161 LSGISYGILINGVCKIGE 178
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 150/316 (47%), Gaps = 11/316 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D Y L+ G + G + LF++L GV V Y SL+ G M ++A E
Sbjct: 9 DSWSYGILIDGLAKAGKLNDARNLFQKLLHS--GVTPSTVAYTSLIHGLCMANSFDDARE 66
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + S V N ++DA C G +EA L +M + + P ++ ++N
Sbjct: 67 LFADM--NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVP-----DVVTYN 119
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ DG C R ++A+ +F +M C+P+ S N +I LC+ + +A +++ EM K
Sbjct: 120 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK 179
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+ PD ++YG+L+D + ++++ F++M+DSG+ P+ YN ++ + LDEA
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEA 239
Query: 249 KSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
F M K + ++ ++ A GKLDE ++ + DDG + + G
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISG 299
Query: 308 ELSKEGREEEVVKLME 323
L R ++ L+E
Sbjct: 300 -LCSIARVDDARHLLE 314
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 10/294 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V D V Y+ +M G + + LF E+ E+LG + + +++ G +
Sbjct: 106 MIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM-ERLG-CTPNRRSHNTIILGLCQQ 163
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A + ++E E + + + ++D L GK +EA KLF RM + P +
Sbjct: 164 SKIDQACQVFHEM--EAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAV 221
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++NV+ G C +A+E+F+ M C P +FN LID CK G L EA
Sbjct: 222 -----TYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFR 276
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M+D G PD TY L+ + RVDD MV +P + N L+ L
Sbjct: 277 LLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC 336
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G + EA+ D MV + D +Y ++ G+ + E++ ++ G
Sbjct: 337 KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 128/317 (40%), Gaps = 35/317 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K D Y L+ G + G + ++LF+ + + G+ V Y ++ G +
Sbjct: 176 MEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDS--GITPSAVTYNVVIHGMCLA 233
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
+EA+E + + + S N ++DA C GK DEA +L RM ++ + P
Sbjct: 234 YTLDEALELFKSM--RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVV 291
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
++ + + N + G C GR K+A EV M
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 351
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
SPD +++N L+ C+ G A EL +M +G+ P+ TY L+ + NR+
Sbjct: 352 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFM 269
+ F +M SG PNL Y L+ G +D F MV + D Y +
Sbjct: 412 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471
Query: 270 MKALSDGGKLDEILEIV 286
L G+ LEI+
Sbjct: 472 AAELCKSGRSARALEIL 488
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M E SPD+ S+ LID L K G L +A L+ ++ GV P Y L+ N
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKF 268
DD F M G P+ YN ++ + GML+EA M++ + D +Y
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 269 MMKALSDGGKLDEIL 283
+M L +++E L
Sbjct: 121 VMDGLCKSSRVEEAL 135
>gi|255660992|gb|ACU25665.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 376
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 140/282 (49%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G + V ++E +K+ G V D + YG L+ G+ G +++
Sbjct: 62 FNIMMRGLFDNGKVNEVISIWELMKKS--GFVEDSITYGILVHGFCKNGYINKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D+A+ + + M P N +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKP-----NAHVYNTLVN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA L E+ DKG+NP
Sbjct: 173 GLVGVSKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + ++ G +P++ + N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMLNILIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 19/226 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDG---VVYGSLMKGY 57
M G + VY+ L+ G V + R+F E+ G V + Y +L+ G
Sbjct: 155 MIKSGCKPNAHVYNTLVNGLVGVSKFEDAIRVFREM-----GTVHCSPTIITYNTLINGL 209
Query: 58 FMKGMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
M EA E + G N V + + ++ LC + K + AL+L++++ ++
Sbjct: 210 CKNEMFGEAYNLVKELLDKGLNPGV----ITYSMLMKGLCLDHKVERALQLWNQVTSKGF 265
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P ++ N++ G C G+ + A+ ++ M ++C+P+ +S N L++ K+G +
Sbjct: 266 KP-----DVQMLNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDI 320
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
A ++ + G+ PD +Y + + NR+ D + V
Sbjct: 321 RNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAV 366
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 11/232 (4%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A Y E V S V AV N++L+ K + +L++ M ++ N +
Sbjct: 7 DSAERVYKEIV--ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSKGNR------S 58
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ SFN+M G G+ + I ++ M + D++++ L+ CKNG + ++ +
Sbjct: 59 VSSFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGFCKNGYINKSLHVLE 118
Query: 184 EMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
KG D + Y +++ C E N +D + M+ SG +PN VYN LV LV V
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEAN-LDKAVSVLNGMIKSGCKPNAHVYNTLVNGLVGV 177
Query: 243 GMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++A + F ++ +Y ++ L E +V +LD G
Sbjct: 178 SKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M KG N
Sbjct: 1 CESGDIDSAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSKG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +V++ + + M SG + Y LV + G ++++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGFCKNGYINKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD+ + ++ G++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSG 159
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M K +S+ M
Sbjct: 6 IDSAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSKGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK++E++ I + G +E S V G K G + + ++E E++
Sbjct: 66 MRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHG-FCKNGYINKSLHVLEMAEQK 123
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 149/317 (47%), Gaps = 10/317 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G V D V++ +M GF R GD F+E++++ G+ +DGV Y +L+ G
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR--GLAADGVTYTALINGLCRA 403
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA E E+ + + AV ++D C GK EA + ++M KR+
Sbjct: 404 GELKEAERVLQEM--EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ-----KRV 456
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ ++DG C QG A E+ +M + ++N+LI+ LCK G L +A
Sbjct: 457 TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+M + G+ PD YTY ++ A + +D + ++M+D G++P + YN L+
Sbjct: 517 TMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFC 576
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
G ++ K + M++K + + +Y +MK + EI G+L +
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636
Query: 300 ELQEFVKGELSKEGREE 316
+KG +E
Sbjct: 637 TYNILIKGHCKARNMKE 653
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 10/281 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G +PV Y+ ++ +G R+ E++ + GVV D V+ ++M G+ K
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV--MHGVVLDAAVFTTVMSGFCRK 368
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A ++E + + V ++++ LC G+ EA ++ M++ K L
Sbjct: 369 GDLAAARNWFDEM--QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED-----KGL 421
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
V+ ++ V+ DGYC G+ +A V KM + R +P+ +++ L D LCK G + A E
Sbjct: 422 DVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANE 481
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM KG+ + +TY L++ + ++ M ++GL+P++ Y ++G L
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
Q LD A S M+ K +K +Y +M G+++
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 10/271 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + V Y+ L G + GD L E+ K G+ + Y SL+ G
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK--GLELNIFTYNSLINGLCKA 508
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+AM + + + +K +++ ALC + + D A L M ++ P
Sbjct: 509 GNLEQAMRTMIDM--DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP--- 563
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++NV+ +G+C GR + + M E P+T ++N+L+ Q C + E
Sbjct: 564 --TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+Y M + V P+E TY +L+ + + + + +M++ G R + YN L+ L
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMM 270
+ EA+ F+ M K +L + Y F +
Sbjct: 682 KKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 15/219 (6%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA++ + E +N+ + N +L ALC G+ +A +LFD M + PP +
Sbjct: 239 DEAVQLFQELPEKNT------CSYNILLKALCTAGRIKDAHQLFDEMAS---PP-----D 284
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ +M GYC + AI++ +M + +++ ++I LC G +++A +
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVE 344
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M GV D + +M + +F +M GL + Y L+ L + G
Sbjct: 345 DMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAG 404
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
L EA+ M K L +D +Y ++ GK+ E
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTE 443
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 11/223 (4%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY+Y + + + D L +E+ +K G+ V Y LM G+ M G E
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDK--GIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ +N + + NS++ C +++ M ++ P N ++
Sbjct: 586 RLLEWMLEKN--IHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP-----NENTY 638
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N++ G+C K+A+ +M E S+N LI L K EA L+ +M
Sbjct: 639 NILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
+ + + Y +D F + ++ ++V+ L ++A
Sbjct: 699 ERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSIA 741
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 147/317 (46%), Gaps = 45/317 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D + + L+ G G L +++ E G + V YG ++ G
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY--GCQPNAVTYGPVLNVMCKSGQTA 343
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
AME + E ++K+ AV + ++D LC +G D A LF+ M+ K + N+
Sbjct: 344 LAMELLRKM--EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM-----KGITTNI 396
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ G+C GR+ D ++ R M + + +P+ ++F+ LID K G L EAEEL+ E
Sbjct: 397 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 456
Query: 185 MSDKGVNPDEYTYGLLMDA-CFE----------------------------------VNR 209
M +G+ PD TY L+D C E NR
Sbjct: 457 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 516
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKF 268
+DDG FRKM G+ + YN L+ ++G L+ AK F MV +K+ + +YK
Sbjct: 517 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 576
Query: 269 MMKALSDGGKLDEILEI 285
++ L D G+ ++ LEI
Sbjct: 577 LLDGLCDNGESEKALEI 593
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 154/329 (46%), Gaps = 13/329 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGD-SDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
M +KG + + Y+ L+ GF G DG L + +K K+ V V + L+ +
Sbjct: 387 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV---VTFSVLIDSFVK 443
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+G EA E + E + + + + S++D C D+A ++ D M ++ P
Sbjct: 444 EGKLREAEELHKEMI--HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP-- 499
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ +FN++ +GYC R D +E+FRKM DT+++N LI C+ G L A+
Sbjct: 500 ---NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 556
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ EM + V P+ TY +L+D + + F K+ S + ++ +YN ++ +
Sbjct: 557 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 616
Query: 240 VQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+D+A F + +K +K +Y M+ L G L E + + +DG
Sbjct: 617 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 676
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKER 327
++ L +G + VKL+E+ +R
Sbjct: 677 WTYNILIRAHLG-DGDATKSVKLIEELKR 704
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 105/200 (52%), Gaps = 6/200 (3%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+ + +++++ LC G+ EAL+L DRM + P +L + N + +G C G+ +
Sbjct: 255 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP-----DLITINTLVNGLCLSGKEAE 309
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ + KM EY C P+ +++ +++ +CK+G A A EL +M ++ + D Y +++D
Sbjct: 310 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 369
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE-AKSFFDIMVKKLKM 261
+ +D+ F +M G+ N+ YN L+G G D+ AK D++ +K+
Sbjct: 370 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 429
Query: 262 DDASYKFMMKALSDGGKLDE 281
+ ++ ++ + GKL E
Sbjct: 430 NVVTFSVLIDSFVKEGKLRE 449
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 14/219 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G VAD V Y+ L+ GF G + LF+E+ + V + V Y L+ G
Sbjct: 527 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR--KVPPNIVTYKILLDGLCDN 584
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A+E + + E S +++ N ++ +CN K D+A LF + P K +
Sbjct: 585 GESEKALEIFEKI--EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-----PLKGV 637
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++N+M G C +G +A +FRKM E +PD ++N LI +G ++ +
Sbjct: 638 KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVK 697
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
L E+ G + D T +++D DD A YF K
Sbjct: 698 LIEELKRCGFSVDASTIKMVIDML-----SDDKANYFSK 731
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 110/266 (41%), Gaps = 23/266 (8%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+ A+ ++D L L +M+ K +A NL + ++M + +C + A K
Sbjct: 192 LFSAIAKTKQYDLVLALCKQME-----LKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 246
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
+ + P+T++F+ LI+ LC G ++EA EL M + G PD T L++ +
Sbjct: 247 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 306
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+ KMV+ G +PN Y ++ + + G A M ++ +K+D Y
Sbjct: 307 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 366
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
++ L G LD + ++ GI + + G GR ++ KL+ +
Sbjct: 367 IIDGLCKHGSLDNAFNLFNE-MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 425
Query: 329 KA----------------EAKAREAE 338
K E K REAE
Sbjct: 426 KINPNVVTFSVLIDSFVKEGKLREAE 451
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 161/322 (50%), Gaps = 10/322 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G P YS ++ G + + +FE + +K G ++ +Y +L+ Y G
Sbjct: 319 RGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQK--GCRANVAIYTALIDSYSKNGSM 376
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EEAM + +N + AV + +++ LC +G+ D+ ++LFD +N K +A+N
Sbjct: 377 EEAMRLFERM--KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRN-----KGVAIN 429
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + DG GR +DA +F +M E C+ D+ +N +ID L K+G + +A L+G
Sbjct: 430 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFG 489
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M ++G + YT+ +L+D F+ ++ ++ ++ KM+D G+ P +A + L L G
Sbjct: 490 RMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCG 549
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+ A D + + + +++ M+ L ++ E ++ GI+D G E ++
Sbjct: 550 KVARACKILDDLAPMGIIPETAFEDMINTLCKAQRIKEACKLADGIVDRGR-EIPGRIRT 608
Query: 304 FVKGELSKEGREEEVVKLMEKK 325
+ L K G + V+KLM K
Sbjct: 609 VLINALRKAGNSDLVIKLMHSK 630
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 7/243 (2%)
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
M+ A NS++ + N G +E L ++ RMK P +L ++N + +G +
Sbjct: 183 MTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDP-----SLYTYNFLVNGLVNSMFIE 237
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
A +VF M + PDT+++N +I CK G L +A E + +M K V PD+ TY L+
Sbjct: 238 SAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLI 297
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LK 260
AC+ D + + +M + GL Y+ ++G L + EA + F+ M +K +
Sbjct: 298 QACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCR 357
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
+ A Y ++ + S G ++E + + + ++G + V G L K GR ++ ++
Sbjct: 358 ANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNG-LCKSGRLDDGME 416
Query: 321 LME 323
L +
Sbjct: 417 LFD 419
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 137/357 (38%), Gaps = 89/357 (24%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVF-----RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
DP +Y+Y F+ +G + +F ++FE + G +V D V Y ++KGY G
Sbjct: 217 DPSLYTY---NFLVNGLVNSMFIESAEKVFEVMDG--GKIVPDTVTYNIMIKGYCKAGKL 271
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++AME + + E +VK + +++ A + FD L L+ M+ + L +
Sbjct: 272 QKAMEKFRDM--EMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEE-----RGLEIP 324
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S++++ G C Q + +A VF M + C + + LID KNG + EA L
Sbjct: 325 PHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRL-- 382
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
F +M + G P+ Y+ LV L + G
Sbjct: 383 ---------------------------------FERMKNEGFEPDAVTYSVLVNGLCKSG 409
Query: 244 MLDEAKSFFDIMVKK------------------------------------LKMDDASYK 267
LD+ FD K D Y
Sbjct: 410 RLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYN 469
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ AL+ GK+D+ L + G + ++G + + G L KE + EE +K +K
Sbjct: 470 AIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDG-LFKEHKNEEAIKFWDK 525
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
+LI+ L + L + ++ E+ D+G+ E L+ + + V++ +R+M ++
Sbjct: 155 SLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKEN 214
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEI 282
G+ P+L YN LV LV ++ A+ F++M K+ D +Y M+K GKL +
Sbjct: 215 GIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKA 274
Query: 283 LE 284
+E
Sbjct: 275 ME 276
>gi|218197158|gb|EEC79585.1| hypothetical protein OsI_20759 [Oryza sativa Indica Group]
Length = 282
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
MGE+ D ++NNLI L G+++EAE LY EM + G+ DE TY LLM CF V+R
Sbjct: 1 MGEWEVVADVAAYNNLIRHLSLQGLVSEAELLYKEMGESGLKADEETYVLLMQGCFRVDR 60
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKF 268
+D+G YF M + GL+P+ Y+++V L+ GMLD A + D M K++ ASY+
Sbjct: 61 IDEGINYFDGMAELGLKPDATAYHKIVDGLIGFGMLDNAHGYLDKMRGKEISPSIASYEA 120
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
++KA LD+ ++I IL D + FS+E+++ ++G L + GRE ++ KL E
Sbjct: 121 LLKAYIGEASLDKSIDIAKDILLDEKVVFSDEMRDLLEGALREAGREGDITKLYE 175
>gi|255660984|gb|ACU25661.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 376
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 140/282 (49%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G + D V ++E +K+ G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNDKVDEVISIWELMKKS--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D A+ + + M P N +N + +
Sbjct: 120 A--EQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP-----NAHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA L E+ DKG+NP
Sbjct: 173 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 13/223 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VY+ L+ G V + R+F E+ + Y +L+ G
Sbjct: 155 MIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTM--HCSPTIITYNTLINGLCKN 212
Query: 61 GMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
M EA E + G N V + + ++ LC + K ++AL+L++++ ++ P
Sbjct: 213 EMFGEAYNLVKELLDKGLNPGV----ITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKP- 267
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ N++ G C G+ + A+ ++ M ++C+P+ +S N L++ K+G + A
Sbjct: 268 ----DVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNA 323
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
++ + G+ PD +Y + + NR+ D + V
Sbjct: 324 LVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAV 366
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 11/226 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y E V S V AV N++L+ K + +L++ M +E N ++ SFN+
Sbjct: 13 YKEIV--ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNI 64
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G + + I ++ M + D++++ L+ CKNG + ++ + KG
Sbjct: 65 MMRGLFDNDKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124
Query: 190 VNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D + Y +++ C E N +D + M+ SG +PN VYN L+ LV ++A
Sbjct: 125 GVVDAFAYSAMINGLCKEAN-LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDA 183
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F ++ +Y ++ L E +V +LD G
Sbjct: 184 IRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ ++VD+ + + M SG + Y LV + G +D++ ++
Sbjct: 60 SSFNIMMRGLFDNDKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD + ++ G++ G
Sbjct: 120 AEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSG 159
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D K+DE++ I + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNDKVDEVISIWELMKKSGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAEQK 123
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 149/317 (47%), Gaps = 10/317 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G V D V++ +M GF R GD F+E++++ G+ +DGV Y +L+ G
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR--GLAADGVTYTALINGLCRA 403
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA E E+ + + AV ++D C GK EA + ++M KR+
Sbjct: 404 GELKEAERVLQEM--EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ-----KRV 456
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ ++DG C QG A E+ +M + ++N+LI+ LCK G L +A
Sbjct: 457 TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMR 516
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+M + G+ PD YTY ++ A + +D + ++M+D G++P + YN L+
Sbjct: 517 TMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFC 576
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
G ++ K + M++K + + +Y +MK + EI G+L +
Sbjct: 577 MSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNEN 636
Query: 300 ELQEFVKGELSKEGREE 316
+KG +E
Sbjct: 637 TYNILIKGHCKARNMKE 653
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 10/281 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G +PV Y+ ++ +G R+ E++ + GVV D V+ ++M G+ K
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV--MHGVVLDAAVFTTVMSGFCRK 368
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A ++E + + V ++++ LC G+ EA ++ M++ K L
Sbjct: 369 GDLAAARNWFDEM--QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED-----KGL 421
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
V+ ++ V+ DGYC G+ +A V KM + R +P+ +++ L D LCK G + A E
Sbjct: 422 DVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANE 481
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM KG+ + +TY L++ + ++ M ++GL+P++ Y ++G L
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
Q LD A S M+ K +K +Y +M G+++
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 10/271 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + V Y+ L G + GD L E+ K G+ + Y SL+ G
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK--GLELNIFTYNSLINGLCKA 508
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+AM + + + +K +++ ALC + + D A L M ++ P
Sbjct: 509 GNLEQAMRTMIDM--DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP--- 563
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++NV+ +G+C GR + + M E P+T ++N+L+ Q C + E
Sbjct: 564 --TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+Y M + V P+E TY +L+ + + + + +M++ G R + YN L+ L
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMM 270
+ EA+ F+ M K +L + Y F +
Sbjct: 682 KKKKFTEARRLFEKMRKDRLTAEPDVYNFYI 712
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 15/219 (6%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA++ + E +N+ + N +L ALC G+ +A +LFD M + PP +
Sbjct: 239 DEAVQLFQELPEKNT------CSYNILLKALCTAGRIKDAHQLFDEMAS---PP-----D 284
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ +M GYC + AI++ +M + +++ ++I LC G +++A +
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVE 344
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M GV D + +M + +F +M GL + Y L+ L + G
Sbjct: 345 DMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAG 404
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
L EA+ M K L +D +Y ++ GK+ E
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTE 443
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 11/223 (4%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY+Y + + + D L +E+ +K G+ V Y LM G+ M G E
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDK--GIKPTIVTYNVLMNGFCMSGRVEGGK 585
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ +N + + NS++ C +++ M ++ P N ++
Sbjct: 586 RLLEWMLEKN--IHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP-----NENTY 638
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N++ G+C K+A+ +M E S+N LI L K EA L+ +M
Sbjct: 639 NILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
+ + Y +D F + ++ ++V+ L ++A
Sbjct: 699 DRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSIA 741
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 161/322 (50%), Gaps = 10/322 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G P YS ++ G + + +FE + +K G ++ +Y +L+ Y G
Sbjct: 317 RGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQK--GCRANVAIYTALIDSYSKNGSM 374
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EEAM + +N + AV + +++ LC +G+ D+ ++LFD +N K +A+N
Sbjct: 375 EEAMRLFERM--KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRN-----KGVAIN 427
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + DG GR +DA +F +M E C+ D+ +N +ID L K+G + +A L+G
Sbjct: 428 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFG 487
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M ++G + YT+ +L+D F+ ++ ++ ++ KM+D G+ P +A + L L G
Sbjct: 488 RMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCG 547
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+ A D + + + +++ M+ L ++ E ++ GI+D G E ++
Sbjct: 548 KVARACKILDDLAPMGIIPETAFEDMINTLCKAQRIKEACKLADGIVDRGR-EIPGRIRT 606
Query: 304 FVKGELSKEGREEEVVKLMEKK 325
+ L K G + V+KLM K
Sbjct: 607 VLINALRKAGNSDLVIKLMHSK 628
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 7/243 (2%)
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
M+ A NS++ + N G +E L ++ RMK P +L ++N + +G +
Sbjct: 181 MTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDP-----SLYTYNFLVNGLVNSMFIE 235
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
A +VF M + PDT+++N +I CK G L +A E + +M K V PD+ TY L+
Sbjct: 236 SAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLI 295
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LK 260
AC+ D + + +M + GL Y+ ++G L + EA + F+ M +K +
Sbjct: 296 QACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCR 355
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
+ A Y ++ + S G ++E + + + ++G + V G L K GR ++ ++
Sbjct: 356 ANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNG-LCKSGRLDDGME 414
Query: 321 LME 323
L +
Sbjct: 415 LFD 417
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 137/357 (38%), Gaps = 89/357 (24%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVF-----RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
DP +Y+Y F+ +G + +F ++FE + G +V D V Y ++KGY G
Sbjct: 215 DPSLYTY---NFLVNGLVNSMFIESAEKVFEVMDG--GKIVPDTVTYNIMIKGYCKAGKL 269
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++AME + + E +VK + +++ A + FD L L+ M+ + L +
Sbjct: 270 QKAMEKFRDM--EMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEE-----RGLEIP 322
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S++++ G C Q + +A VF M + C + + LID KNG + EA L
Sbjct: 323 PHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRL-- 380
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
F +M + G P+ Y+ LV L + G
Sbjct: 381 ---------------------------------FERMKNEGFEPDAVTYSVLVNGLCKSG 407
Query: 244 MLDEAKSFFDIMVKK------------------------------------LKMDDASYK 267
LD+ FD K D Y
Sbjct: 408 RLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYN 467
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ AL+ GK+D+ L + G + ++G + + G L KE + EE +K +K
Sbjct: 468 AIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDG-LFKEHKNEEAIKFWDK 523
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
+LI+ L + L + ++ E+ D+G+ E L+ + + V++ +R+M ++
Sbjct: 153 SLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKEN 212
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEI 282
G+ P+L YN LV LV ++ A+ F++M K+ D +Y M+K GKL +
Sbjct: 213 GIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKA 272
Query: 283 LE 284
+E
Sbjct: 273 ME 274
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 155/338 (45%), Gaps = 25/338 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-VYGSLMKGYFMKGM 62
+G D + Y+ L+ GF G G F L +E+ K ++ GV +Y L+ +G
Sbjct: 179 RGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILK---NINPGVYIYNILINALCKEGN 235
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+EA AV +K V ++++D C G+ A ++F M P
Sbjct: 236 VKEAKNLL--AVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNP----- 288
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ S+N+M +G C R +A+ + R+M PDT+++N+LID LCK+G + A L
Sbjct: 289 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 348
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM +G D TY L+DA + +D F KM + G++P + Y L+ L +
Sbjct: 349 NEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKG 408
Query: 243 GMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G L A+ F ++VK +D +Y M+ L G DE L I + D+G I +
Sbjct: 409 GRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 468
Query: 302 QEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+ ++ L EK E +KAE E A
Sbjct: 469 EIIIRS-------------LFEKDENDKAEKLLHEMIA 493
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 148/333 (44%), Gaps = 11/333 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG A+ V + L+ F G F + ++ + G D + +LMKG +K
Sbjct: 36 MEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKL--GYQPDTITLNTLMKGLCLK 93
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++++ +++ V + +M V+ ++L+ LC G+ A+KL +++ P
Sbjct: 94 GEVKKSLHFHDKVVAQ--GFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRP--- 148
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +N + DG C +A +++ +M PD +++ LI C G L A
Sbjct: 149 --NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFS 206
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM K +NP Y Y +L++A + V + M G++P + Y+ L+
Sbjct: 207 LLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYC 266
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
VG + AK F MV+ + + SY M+ L ++DE + ++ +L + +
Sbjct: 267 LVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV 326
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
+ G L K GR + LM + A
Sbjct: 327 TYNSLIDG-LCKSGRITSALNLMNEMHHRGQPA 358
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 11/220 (5%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+P VYSY ++ G + D L E+ K +V D V Y SL+ G G
Sbjct: 286 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHK--NMVPDTVTYNSLIDGLCKSGRITS 343
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A+ NE + V S+LDALC N D+A LF +MK P +
Sbjct: 344 ALNLMNEM--HHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP-----TMY 396
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ + DG C GR K+A E+F+ + C D ++ +I LCK GM EA + +M
Sbjct: 397 TYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKM 456
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
D G P+ T+ +++ + FE + D +M+ GL
Sbjct: 457 EDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 109/248 (43%), Gaps = 9/248 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V YS LM G+ G+ ++F + + GV + Y ++ G +EAM
Sbjct: 256 VTYSTLMDGYCLVGEVQNAKQIFHAMVQM--GVNPNVYSYNIMINGLCKCKRVDEAMNLL 313
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E + +N + V NS++D LC +G+ AL L + M + P ++ ++ +
Sbjct: 314 REMLHKN--MVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPA-----DVVTYTSL 366
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
D C A +F KM E P ++ LID LCK G L A+EL+ + KG
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGC 426
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
D +TY +++ + D+ KM D+G PN + ++ L + D+A+
Sbjct: 427 CIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEK 486
Query: 251 FFDIMVKK 258
M+ K
Sbjct: 487 LLHEMIAK 494
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 78/165 (47%), Gaps = 5/165 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +L +L ++ A+ L +M+ K + N + N++ + +C G+ + V
Sbjct: 14 NKILGSLAKMKQYLTAISLSKQME-----VKGIRANFVTLNILINCFCHLGQMAFSFSVL 68
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
K+ + PDT++ N L+ LC G + ++ + ++ +G D +YG L++ ++
Sbjct: 69 GKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKI 128
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
R + D RPN+ +YN ++ L + +++EA +
Sbjct: 129 GETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLY 173
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
R +P + FN ++ L K A L +M KG+ + T +L++ + ++
Sbjct: 5 RHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFS 64
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKA 272
+ K++ G +P+ N L+ L G + ++ F D ++ + +MD SY ++
Sbjct: 65 FSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNG 124
Query: 273 LSDGG 277
L G
Sbjct: 125 LCKIG 129
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 143/284 (50%), Gaps = 10/284 (3%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ ++ G G D L++ L EK + D V +G+L+ G G +A +
Sbjct: 370 TYNIMIKGLFDSGMVDEAIELWD-LLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
EA S ++ + +S+++ LCN G+ +A+K++++M + P N +N +
Sbjct: 429 EA--RVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKP-----NSHIYNALI 481
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G+C R DA+ ++ KM + CSP +++N LID LCK EA + EM + G
Sbjct: 482 SGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
PD TYG L+ F ++DD + +++++ GL+ ++ ++N L+ L G +DEA
Sbjct: 542 PDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHV 601
Query: 252 FDIMVKK--LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
F M +K + +Y +M L + G +D+ + I +DG
Sbjct: 602 FSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG 645
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 43/320 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY--- 57
M D + Y L+ G R GD DG R++ E+ + G+V D +Y SL+KG+
Sbjct: 290 MVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKT--GLVIDAAMYNSLVKGFCQA 347
Query: 58 -------------------------------FMKGMEEEAMECYNEAVGENSSVKMSAVA 86
F GM +EA+E + + + ++ + V
Sbjct: 348 GRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVT 406
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
+++ LC NG ++A +F+ + +++ S++ M +G C GR DA++V
Sbjct: 407 FGTLIHGLCQNGFANKAFTIFEEARVSGK-----QLDVFSYSSMINGLCNVGRLVDAVKV 461
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
+ KM + C P++ +N LI C+ ++A +Y +M+D G +P TY L+D +
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDAS 265
+ + ++ R+MV++G P++ Y L+ L +D+A S + I+ K LK+D
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMM 581
Query: 266 YKFMMKALSDGGKLDEILEI 285
+ ++ L GK+DE L +
Sbjct: 582 HNILIHGLCSAGKVDEALHV 601
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 131/268 (48%), Gaps = 11/268 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ ++ GD D LF+ L+ + V D + Y +LM G + + A++ +
Sbjct: 160 TYNIVLRSLCARGDLDRAVTLFDSLRRR--QVAPDRITYSTLMCGLAKQDRLDHALDLLD 217
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E S V+ V N++L G+F++ ++++D++ + P R NL ++NVM
Sbjct: 218 EM--PRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKD--PGAR--PNLATYNVML 271
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
DG C GRFK+ EV+ +M PD +++ LI LC++G + A +Y E+ G+
Sbjct: 272 DGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLV 331
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
D Y L+ + RV + ++ +GLR NL YN ++ L GM+DEA
Sbjct: 332 IDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIEL 390
Query: 252 FDIMVKKLKM--DDASYKFMMKALSDGG 277
+D++ K + D ++ ++ L G
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNG 418
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 8/261 (3%)
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A +G N ++ ++N++LDA +F +A F + + +R+A NL
Sbjct: 104 DAFRALPSILGCNPGIR----SHNALLDAFVRARRFSDADAFFASLSHGAFG-RRIAPNL 158
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ C +G A+ +F + + +PD ++++ L+ L K L A +L E
Sbjct: 159 QTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDE 218
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV-DSGLRPNLAVYNRLVGKLVQVG 243
M V PD Y L+ CF+ + + K+V D G RPNLA YN ++ L + G
Sbjct: 219 MPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFG 278
Query: 244 MLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
E ++ MV L+ D +Y ++ L G +D + I+ G + +
Sbjct: 279 RFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYN 338
Query: 303 EFVKGELSKEGREEEVVKLME 323
VKG + GR +E K +
Sbjct: 339 SLVKG-FCQAGRVQEAWKFWD 358
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 132/310 (42%), Gaps = 46/310 (14%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+ D V + L+ G ++G ++ F +FEE ++ G D Y S++ G G +A
Sbjct: 401 IPDTVTFGTLIHGLCQNGFANKAFTIFEE--ARVSGKQLDVFSYSSMINGLCNVGRLVDA 458
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
++ Y + + K ++ N+++ C + +A++++ +M + P + +
Sbjct: 459 VKVYEKM--DKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI-----T 511
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF------------------------ 162
+N + DG C ++++A V R+M E +PD ++
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQIL 571
Query: 163 -----------NNLIDQLCKNGMLAEAEELYGEMSDK-GVNPDEYTYGLLMDACFEVNRV 210
N LI LC G + EA ++ +M +K P+ TY LMD +E +
Sbjct: 572 YKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYI 631
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFM 269
D AT + + + GL P++ YN + L + E D ++ + + ++ +
Sbjct: 632 DKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNIL 691
Query: 270 MKALSDGGKL 279
++A+ G +
Sbjct: 692 VRAVIKYGPI 701
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 6/188 (3%)
Query: 143 AIEVFRKMGEYR-CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD----KGVNPDEYTY 197
A++ FR + C+P S N L+D + ++A+ + +S + + P+ TY
Sbjct: 102 ALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTY 161
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
+++ + +D T F + + P+ Y+ L+ L + LD A D M +
Sbjct: 162 NIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPR 221
Query: 258 -KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
+++ D Y ++ G+ ++++ + ++ D G + + L K GR +
Sbjct: 222 SRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFK 281
Query: 317 EVVKLMEK 324
EV ++ E+
Sbjct: 282 EVGEVWER 289
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 147/317 (46%), Gaps = 45/317 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D + + L+ G G L +++ E G + V YG ++ G
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY--GCQPNAVTYGPVLNVMCKSGQTA 245
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
AME + E ++K+ AV + ++D LC +G D A LF+ M+ K + N+
Sbjct: 246 LAMELLRKM--EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM-----KGITTNI 298
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ G+C GR+ D ++ R M + + +P+ ++F+ LID K G L EAEEL+ E
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 185 MSDKGVNPDEYTYGLLMDA-CFE----------------------------------VNR 209
M +G+ PD TY L+D C E NR
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKF 268
+DDG FRKM G+ + YN L+ ++G L+ AK F MV +K+ + +YK
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 269 MMKALSDGGKLDEILEI 285
++ L D G+ ++ LEI
Sbjct: 479 LLDGLCDNGESEKALEI 495
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 154/329 (46%), Gaps = 13/329 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGD-SDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
M +KG + + Y+ L+ GF G DG L + +K K+ V V + L+ +
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV---VTFSVLIDSFVK 345
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+G EA E + E + + + + S++D C D+A ++ D M ++ P
Sbjct: 346 EGKLREAEELHKEMI--HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP-- 401
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ +FN++ +GYC R D +E+FRKM DT+++N LI C+ G L A+
Sbjct: 402 ---NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ EM + V P+ TY +L+D + + F K+ S + ++ +YN ++ +
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 240 VQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+D+A F + +K +K +Y M+ L G L E + + +DG
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKER 327
++ L +G + VKL+E+ +R
Sbjct: 579 WTYNILIRAHLG-DGDATKSVKLIEELKR 606
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 105/200 (52%), Gaps = 6/200 (3%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+ + +++++ LC G+ EAL+L DRM + P +L + N + +G C G+ +
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP-----DLITINTLVNGLCLSGKEAE 211
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ + KM EY C P+ +++ +++ +CK+G A A EL +M ++ + D Y +++D
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE-AKSFFDIMVKKLKM 261
+ +D+ F +M G+ N+ YN L+G G D+ AK D++ +K+
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 262 DDASYKFMMKALSDGGKLDE 281
+ ++ ++ + GKL E
Sbjct: 332 NVVTFSVLIDSFVKEGKLRE 351
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G VAD V Y+ L+ GF G + LF+E+ + V + V Y L+ G
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR--KVPPNIVTYKILLDGLCDN 486
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A+E + + E S +++ N ++ +CN K D+A LF + P K +
Sbjct: 487 GESEKALEIFEKI--EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-----PLKGV 539
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++N+M G C +G +A +FRKM E +PD ++N LI +G ++ +
Sbjct: 540 KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVK 599
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L E+ G + D T +++D
Sbjct: 600 LIEELKRCGFSVDASTIKMVID 621
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 110/266 (41%), Gaps = 23/266 (8%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+ A+ ++D L L +M+ K +A NL + ++M + +C + A K
Sbjct: 94 LFSAIAKTKQYDLVLALCKQME-----LKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 148
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
+ + P+T++F+ LI+ LC G ++EA EL M + G PD T L++ +
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+ KMV+ G +PN Y ++ + + G A M ++ +K+D Y
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
++ L G LD + ++ GI + + G GR ++ KL+ +
Sbjct: 269 IIDGLCKHGSLDNAFNLFNE-MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 329 KA----------------EAKAREAE 338
K E K REAE
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAE 353
>gi|255660988|gb|ACU25663.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 376
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 140/282 (49%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G + V ++E +K+ G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNGKVEEVIXIWELMKKS--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D A+ + + M P N +N + +
Sbjct: 120 A--EQKGGVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSGCKP-----NAHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA L E+ DKG+NP
Sbjct: 173 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +L ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLXKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQHALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 108/280 (38%), Gaps = 65/280 (23%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK------------------------- 39
GFV D + Y L+ GF ++G D + E ++K
Sbjct: 89 GFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRA 148
Query: 40 ---LGGVVSDGV-----VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
L G++ G VY +L+ G E+A+ + E + S + + N+++
Sbjct: 149 VCVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP--TIITYNTLI 206
Query: 92 DALCNNGKFDEALKLFDRMKN-------------------EHNPPKRLAV---------- 122
+ LC N F EA L + + +H K L +
Sbjct: 207 NGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLXKGLCLDHKVEKALQLWNQVTSKGFK 266
Query: 123 -NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ N++ G C G+ + A+ ++ M ++C+P+ +S N L++ K+G + A +
Sbjct: 267 PDVQMHNILIHGLCSVGKMQHALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVI 326
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ + G+ PD +Y + + NR+ D + V
Sbjct: 327 WARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAV 366
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 11/226 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
YNE V S V AV N++L+ K + +L++ M E N ++ SFN+
Sbjct: 13 YNEIV--ESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGREGNR------SVSSFNI 64
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G G+ ++ I ++ M + D++++ L+ CKNG + ++ + KG
Sbjct: 65 MMRGLFDNGKVEEVIXIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124
Query: 190 VNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D + Y +++ C E N +D M+ SG +PN VYN L+ LV ++A
Sbjct: 125 GVVDAFAYSAMINGLCKEAN-LDRAVCVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDA 183
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F ++ +Y ++ L E +V +LD G
Sbjct: 184 IRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKG 229
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + AE +Y E+ + V+PD Y +++ F V ++ D + M G R ++
Sbjct: 1 CESGDIDGAERVYNEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGREGNR-SV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIV-- 286
+ +N ++ L G ++E +++M K ++D+ +Y ++ G +D+ L ++
Sbjct: 60 SSFNIMMRGLFDNGKVEEVIXIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 287 ----GGILD 291
GG++D
Sbjct: 120 AEQKGGVVD 128
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 74/160 (46%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V+ ++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYNEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGREG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +V++ + M SG + Y LV + G +D++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVEEVIXIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD + ++ G++ G
Sbjct: 120 AEQKGGVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSG 159
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D + ++V+S + P+ VYN ++ +V + + +++M ++ +S+ M
Sbjct: 6 IDGAERVYNEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGREGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK++E++ I + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNGKVEEVIXIWELMKKSGFVEDSITYGILVHG-FCKNGYIDKSLHVLEMAEQK 123
>gi|255660982|gb|ACU25660.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 350
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 140/282 (49%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G + D V ++E +K+ G V D + YG L+ G+ G ++++
Sbjct: 36 FNIMMRGLFDNDKVDEVISIWELMKKS--GFVEDSITYGILVHGFCKNGYIDKSLHVLEM 93
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D A+ + + M P N +N + +
Sbjct: 94 A--EQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP-----NAHVYNTLIN 146
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA L E+ DKG+NP
Sbjct: 147 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNP 206
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 207 GVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 266
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 267 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 308
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 108/280 (38%), Gaps = 65/280 (23%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK------------------------- 39
GFV D + Y L+ GF ++G D + E ++K
Sbjct: 63 GFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRA 122
Query: 40 ---LGGVVSDGV-----VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
L G++ G VY +L+ G E+A+ + E + S + + N+++
Sbjct: 123 VSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP--TIITYNTLI 180
Query: 92 DALCNNGKFDEALKLFDRMKN-------------------EHNPPKRLAV---------- 122
+ LC N F EA L + + +H K L +
Sbjct: 181 NGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFK 240
Query: 123 -NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ N++ G C G+ + A+ ++ M ++C+P+ +S N L++ K+G + A +
Sbjct: 241 PDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVI 300
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ + G+ PD +Y + + NR+ D + V
Sbjct: 301 WARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAV 340
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 9/208 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N++L+ K + +L++ M +E N ++ SFN+M G + + I ++
Sbjct: 3 NAMLNGYFRVAKIKDCFELWEMMGSEGNR------SVSSFNIMMRGLFDNDKVDEVISIW 56
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFE 206
M + D++++ L+ CKNG + ++ + KG D + Y +++ C E
Sbjct: 57 ELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKE 116
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDAS 265
N +D + M+ SG +PN VYN L+ LV ++A + F ++ +
Sbjct: 117 AN-LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIIT 175
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDG 293
Y ++ L E +V +LD G
Sbjct: 176 YNTLINGLCKNEMFGEAYNLVKELLDKG 203
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 131 bits (330), Expect = 5e-28, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 134/256 (52%), Gaps = 11/256 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGFV D V Y L+ G +GD + LF E + K G+ D VVY SL+KG ++G+
Sbjct: 319 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK--GIKPDIVVYNSLVKGLCLQGLI 376
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEA-LKLFDRMKNEHNPPKRLAV 122
A++ NE E + N V++ LC G +A + + D + + P
Sbjct: 377 LHALQVMNEMAEEGCHPDIQTY--NIVINGLCKMGNISDATVVMNDAIMKGYLP------ 428
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ +FN + DGYC + + A+++ +M EY +PDT+++N++++ LCK G + E E +
Sbjct: 429 DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETF 488
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM KG +P+ TY +L++ N++++ + KM GL P+ +N L+ +
Sbjct: 489 QEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRN 548
Query: 243 GMLDEAKSFFDIMVKK 258
G L+ A F + +K
Sbjct: 549 GDLEGAYLLFQKLEEK 564
Score = 86.7 bits (213), Expect = 2e-14, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 11/272 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y ++ G G + +LF+++ V + + ++ +G EA
Sbjct: 152 VAYCTVVCGLYAHGHTHDARQLFDQMLHT--HVFPNLAAFNKVLHALCKRGDVLEAGLLL 209
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + S+ + N + LC G+ EA++L D M+ P ++ ++N +
Sbjct: 210 GKVIQRGMSINL--FTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP------DVVTYNTL 261
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C + ++A+ R+M C PD ++N +ID CK M+ EA EL + KG
Sbjct: 262 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 321
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD+ TY L++ V+ F + G++P++ VYN LV L G++ A
Sbjct: 322 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 381
Query: 251 FFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ M ++ D +Y ++ L G + +
Sbjct: 382 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 413
Score = 84.3 bits (207), Expect = 9e-14, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP-------------KR----------- 119
AVA +V+ L +G +A +LFD+M + H P KR
Sbjct: 151 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 210
Query: 120 ------LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
+++NL ++N+ G C GR +A+ + M Y PD +++N LI LCK
Sbjct: 211 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAY-AVPDVVTYNTLIRGLCKKS 269
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
M EA M ++G PD++TY ++D +++ V + + V G P+ Y
Sbjct: 270 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 329
Query: 234 RLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
L+ L G ++ A F + K +K D Y ++K L G + L+++ + ++
Sbjct: 330 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 389
Query: 293 G 293
G
Sbjct: 390 G 390
Score = 64.3 bits (155), Expect = 9e-08, Method: Composition-based stats.
Identities = 59/262 (22%), Positives = 104/262 (39%), Gaps = 44/262 (16%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+KG++ D ++ L+ G+ + D +L E + E G+ D + Y S++ G G
Sbjct: 423 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY--GIAPDTITYNSVLNGLCKAGK 480
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
E E + E + + + + N +++ C + K +EA K+ +M E P +
Sbjct: 481 VNEVNETFQEMILK--GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAV-- 536
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGE--YRCSPDTL-------------------- 160
SFN + G+C G + A +F+K+ E Y + DT
Sbjct: 537 ---SFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIF 593
Query: 161 -------------SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
++ LID CK + A EM KG P T+G ++++
Sbjct: 594 DEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVN 653
Query: 208 NRVDDGATYFRKMVDSGLRPNL 229
+RV MV G+ P +
Sbjct: 654 HRVFQAVGIIHIMVKIGVVPEV 675
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 37/275 (13%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK--RLAVNLGSFNVMAD-------- 132
+A A N+++DAL + D+A K++ RM P + L SF + A
Sbjct: 84 AAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLL 143
Query: 133 ---------GYC-------GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
YC G DA ++F +M P+ +FN ++ LCK G +
Sbjct: 144 RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVL 203
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR----PNLAVY 232
EA L G++ +G++ + +TY + + E R+ + ++VD G+R P++ Y
Sbjct: 204 EAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV----RLVD-GMRAYAVPDVVTY 258
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILD 291
N L+ L + M EA + M+ + + DD +Y ++ + E E++ +
Sbjct: 259 NTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVF 318
Query: 292 DGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
G + + G L EG E ++L + +
Sbjct: 319 KGFVPDQVTYCSLING-LCAEGDVERALELFNEAQ 352
Score = 62.0 bits (149), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 32/189 (16%)
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
Y GR +DA++ F +M + C P ++N ++D L +A ++Y M GV+P
Sbjct: 59 AYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSP 118
Query: 193 DEYTYGL-LMDACFEV------------------------------NRVDDGATYFRKMV 221
D +T+ + L C D F +M+
Sbjct: 119 DLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQML 178
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
+ + PNLA +N+++ L + G + EA ++++ + ++ +Y ++ L + G+L
Sbjct: 179 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLP 238
Query: 281 EILEIVGGI 289
E + +V G+
Sbjct: 239 EAVRLVDGM 247
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 143/284 (50%), Gaps = 10/284 (3%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ ++ G G D L++ L EK + D V +G+L+ G G +A +
Sbjct: 370 TYNIMIKGLFDSGMVDEAIELWD-LLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
EA S ++ + +S+++ LCN G+ +A+K++++M + P N +N +
Sbjct: 429 EA--RVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKP-----NSHIYNALI 481
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G+C R DA+ ++ KM + CSP +++N LID LCK EA + EM + G
Sbjct: 482 SGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
PD TYG L+ F ++DD + +++++ GL+ ++ ++N L+ L G +DEA
Sbjct: 542 PDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHV 601
Query: 252 FDIMVKK--LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
F M +K + +Y +M L + G +D+ + I +DG
Sbjct: 602 FSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG 645
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 43/320 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY--- 57
M D + Y L+ G R GD DG R++ E+ + G+V D +Y SL+KG+
Sbjct: 290 MVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKT--GLVIDAAMYNSLVKGFCQA 347
Query: 58 -------------------------------FMKGMEEEAMECYNEAVGENSSVKMSAVA 86
F GM +EA+E + + + ++ + V
Sbjct: 348 GRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVT 406
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
+++ LC NG ++A +F+ + +++ S++ M +G C GR DA++V
Sbjct: 407 FGTLIHGLCQNGFANKAFTIFEEARVSGK-----QLDVFSYSSMINGLCNVGRLVDAVKV 461
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
+ KM + C P++ +N LI C+ ++A +Y +M+D G +P TY L+D +
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDAS 265
+ + ++ R+MV++G P++ Y L+ L +D+A S + I+ K LK+D
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMM 581
Query: 266 YKFMMKALSDGGKLDEILEI 285
+ ++ L GK+DE L +
Sbjct: 582 HNILIHGLCSAGKVDEALHV 601
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 131/268 (48%), Gaps = 11/268 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ ++ GD D LF+ L+ + V D + Y +LM G + + A++ +
Sbjct: 160 TYNIVLRSLCARGDLDRAVTLFDSLRRR--QVAPDCITYSTLMCGLAKQDRLDHALDLLD 217
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E S V+ V N++L G+F++ ++++D++ + P R NL ++NVM
Sbjct: 218 EM--PRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKD--PGAR--PNLATYNVML 271
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
DG C GRFK+ EV+ +M PD +++ LI LC++G + A +Y E+ G+
Sbjct: 272 DGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLV 331
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
D Y L+ + RV + ++ +GLR NL YN ++ L GM+DEA
Sbjct: 332 IDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIEL 390
Query: 252 FDIMVKKLKM--DDASYKFMMKALSDGG 277
+D++ K + D ++ ++ L G
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNG 418
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 8/297 (2%)
Query: 29 VFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANN 88
+ L L+ + S +V S M +A +G N ++ ++N
Sbjct: 68 LLNLLPRLRHRPRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIR----SHN 123
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
++LDA +F +A F + + +R+A NL ++N++ C +G A+ +F
Sbjct: 124 ALLDAFVRARRFSDADAFFASLSHGAFG-RRIAPNLQTYNIVLRSLCARGDLDRAVTLFD 182
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+ + +PD ++++ L+ L K L A +L EM GV PD Y L+ CF+
Sbjct: 183 SLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAG 242
Query: 209 RVDDGATYFRKMV-DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASY 266
+ + K+V D G RPNLA YN ++ L + G E ++ MV L+ D +Y
Sbjct: 243 EFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITY 302
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
++ L G +D + I+ G + + VKG + GR +E K +
Sbjct: 303 GILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKG-FCQAGRVQEAWKFWD 358
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 132/310 (42%), Gaps = 46/310 (14%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+ D V + L+ G ++G ++ F +FEE ++ G D Y S++ G G +A
Sbjct: 401 IPDTVTFGTLIHGLCQNGFANKAFTIFEE--ARVSGKQLDVFSYSSMINGLCNVGRLVDA 458
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
++ Y + + K ++ N+++ C + +A++++ +M + P + +
Sbjct: 459 VKVYEKM--DKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI-----T 511
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF------------------------ 162
+N + DG C ++++A V R+M E +PD ++
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQIL 571
Query: 163 -----------NNLIDQLCKNGMLAEAEELYGEMSDK-GVNPDEYTYGLLMDACFEVNRV 210
N LI LC G + EA ++ +M +K P+ TY LMD +E +
Sbjct: 572 YKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYI 631
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFM 269
D AT + + + GL P++ YN + L + E D ++ + + ++ +
Sbjct: 632 DKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNIL 691
Query: 270 MKALSDGGKL 279
++A+ G +
Sbjct: 692 VRAVIKYGPI 701
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG----LRPNLAVYNRLVGKLVQVGM 244
G NP ++ L+DA R D +F + + PNL YN ++ L G
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
LD A + FD + ++ + D +Y +M L+ +LD L+++ + G++
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDE-MPRSGVQPDVVCYN 232
Query: 304 FVKGELSKEGREEEVVKLMEK 324
+ G K G E+V+++ +K
Sbjct: 233 ALLGGCFKAGEFEKVMRVWDK 253
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 131 bits (330), Expect = 5e-28, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 134/256 (52%), Gaps = 11/256 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGFV D V Y L+ G +GD + LF E + K G+ D VVY SL+KG ++G+
Sbjct: 320 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK--GIKPDIVVYNSLVKGLCLQGLI 377
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEA-LKLFDRMKNEHNPPKRLAV 122
A++ NE E + N V++ LC G +A + + D + + P
Sbjct: 378 LHALQVMNEMAEEGCHPDIQTY--NIVINGLCKMGNISDATVVMNDAIMKGYLP------ 429
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ +FN + DGYC + + A+++ +M EY +PDT+++N++++ LCK G + E E +
Sbjct: 430 DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETF 489
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM KG +P+ TY +L++ N++++ + KM GL P+ +N L+ +
Sbjct: 490 QEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRN 549
Query: 243 GMLDEAKSFFDIMVKK 258
G L+ A F + +K
Sbjct: 550 GDLEGAYLLFQKLEEK 565
Score = 86.7 bits (213), Expect = 2e-14, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 11/272 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y ++ G G + +LF+++ V + + ++ +G EA
Sbjct: 153 VAYCTVVCGLYAHGHTHDARQLFDQMLHT--HVFPNLAAFNKVLHALCKRGDVLEAGLLL 210
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + S+ + N + LC G+ EA++L D M+ P ++ ++N +
Sbjct: 211 GKVIQRGMSINL--FTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP------DVVTYNTL 262
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C + ++A+ R+M C PD ++N +ID CK M+ EA EL + KG
Sbjct: 263 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 322
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD+ TY L++ V+ F + G++P++ VYN LV L G++ A
Sbjct: 323 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 382
Query: 251 FFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ M ++ D +Y ++ L G + +
Sbjct: 383 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 414
Score = 84.3 bits (207), Expect = 1e-13, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP-------------KR----------- 119
AVA +V+ L +G +A +LFD+M + H P KR
Sbjct: 152 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 211
Query: 120 ------LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
+++NL ++N+ G C GR +A+ + M Y PD +++N LI LCK
Sbjct: 212 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAY-AVPDVVTYNTLIRGLCKKS 270
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
M EA M ++G PD++TY ++D +++ V + + V G P+ Y
Sbjct: 271 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 330
Query: 234 RLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
L+ L G ++ A F + K +K D Y ++K L G + L+++ + ++
Sbjct: 331 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 390
Query: 293 G 293
G
Sbjct: 391 G 391
Score = 64.3 bits (155), Expect = 1e-07, Method: Composition-based stats.
Identities = 59/262 (22%), Positives = 104/262 (39%), Gaps = 44/262 (16%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+KG++ D ++ L+ G+ + D +L E + E G+ D + Y S++ G G
Sbjct: 424 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY--GIAPDTITYNSVLNGLCKAGK 481
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
E E + E + + + + N +++ C + K +EA K+ +M E P +
Sbjct: 482 VNEVNETFQEMILK--GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAV-- 537
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGE--YRCSPDTL-------------------- 160
SFN + G+C G + A +F+K+ E Y + DT
Sbjct: 538 ---SFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIF 594
Query: 161 -------------SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
++ LID CK + A EM KG P T+G ++++
Sbjct: 595 DEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVN 654
Query: 208 NRVDDGATYFRKMVDSGLRPNL 229
+RV MV G+ P +
Sbjct: 655 HRVFQAVGIIHIMVKIGVVPEV 676
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 37/275 (13%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK--RLAVNLGSFNVMAD-------- 132
+A A N+++DAL + D+A K++ RM P + L SF + A
Sbjct: 85 AAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLL 144
Query: 133 ---------GYC-------GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
YC G DA ++F +M P+ +FN ++ LCK G +
Sbjct: 145 RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVL 204
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR----PNLAVY 232
EA L G++ +G++ + +TY + + E R+ + ++VD G+R P++ Y
Sbjct: 205 EAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV----RLVD-GMRAYAVPDVVTY 259
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILD 291
N L+ L + M EA + M+ + + DD +Y ++ + E E++ +
Sbjct: 260 NTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVF 319
Query: 292 DGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
G + + G L EG E ++L + +
Sbjct: 320 KGFVPDQVTYCSLING-LCAEGDVERALELFNEAQ 353
Score = 62.0 bits (149), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 32/189 (16%)
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
Y GR +DA++ F +M + C P ++N ++D L +A ++Y M GV+P
Sbjct: 60 AYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSP 119
Query: 193 DEYTYGL-LMDACFEV------------------------------NRVDDGATYFRKMV 221
D +T+ + L C D F +M+
Sbjct: 120 DLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQML 179
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
+ + PNLA +N+++ L + G + EA ++++ + ++ +Y ++ L + G+L
Sbjct: 180 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLP 239
Query: 281 EILEIVGGI 289
E + +V G+
Sbjct: 240 EAVRLVDGM 248
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 149/311 (47%), Gaps = 14/311 (4%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ ++ G+ G D RL E+ V D Y +L++G +G A+ +E
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEMP-----VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ + V +L+A C + +A+KL D M+++ P ++ ++NV+ +
Sbjct: 58 MLRRRCVPDV--VTYTILLEATCKRSGYKQAMKLLDEMRDKGCTP-----DIVTYNVVVN 110
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G C +GR DAIE + + Y C P+T+S+N ++ LC +AEEL GEM KG P
Sbjct: 111 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 170
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+ T+ +L+ V+ ++ G PN YN L+ + +D+A +F
Sbjct: 171 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 230
Query: 253 DIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSK 311
D+MV + D SY ++ AL G++D +E++ + D G + G L+K
Sbjct: 231 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG-LTK 289
Query: 312 EGREEEVVKLM 322
G+ +E ++L+
Sbjct: 290 AGKTKEALELL 300
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 125/267 (46%), Gaps = 10/267 (3%)
Query: 34 EELKEKLG--GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
EEL ++G G + V + L+ KG+ E A+E + ++++ N +L
Sbjct: 157 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI--PKYGCTPNSLSYNPLL 214
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
A C K D+A+ D M + P ++ S+N + C G A+E+ ++
Sbjct: 215 HAFCKQKKMDKAMAFLDLMVSRGCYP-----DIVSYNTLLTALCRSGEVDVAVELLHQLK 269
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ C+P +S+N +ID L K G EA EL EM KG+ PD TY + +R++
Sbjct: 270 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 329
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM-DDASYKFMM 270
D F K+ D G+RPN +YN ++ L + A F M+ M ++++Y ++
Sbjct: 330 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 389
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEF 297
+ L+ G + E +++ + G E
Sbjct: 390 EGLAYEGLIKEARDLLDELCSRAGEEI 416
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ R G+ D L +LK+K G + Y +++ G
Sbjct: 233 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK--GCAPVLISYNTVIDGLTKA 290
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+E NE V + ++ + +++ LC + ++A++ F ++++ P
Sbjct: 291 GKTKEALELLNEMVSK--GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP--- 345
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +N + G C + AI++F M C P+ ++ LI+ L G++ EA +
Sbjct: 346 --NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 403
Query: 181 LYGEMSDKG 189
L E+ +
Sbjct: 404 LLDELCSRA 412
>gi|255660976|gb|ACU25657.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 376
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 140/282 (49%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E + E G V D YG L+ G+ G ++++
Sbjct: 62 FNTMMRGLFDNGKVDEVISIWELMNES--GFVEDSRTYGILVHGFCKNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D A+ + + M P N+ +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKP-----NVHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ CKN M EA L E+ DKG++P
Sbjct: 173 GLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM+ ++V + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMEGLCLDHKVARALQLWNQVTSKGFKPDVQMHNILIRGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ + K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNLWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 133/281 (47%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D Y L+ GF ++G D + E+ E+ GGV+ D Y +++ G + +
Sbjct: 89 GFVEDSRTYGILVHGFCKNGYIDKSLHVL-EMAEQKGGVL-DAFAYSAMINGLCKEANLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ N + S K + N++++ L KF++A+++F M H P +
Sbjct: 147 RAVSVLNGMI--KSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTII---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G+C F +A + +++ + P ++++ L++ LC + +A A +L+ +
Sbjct: 201 -TYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCLDHKVARALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + + M PNL +N L+ + G
Sbjct: 260 VTSKGFKPDVQMHNILIRGLCSVGKMQLALSLYFDMNLWKCAPNLVSHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY ++ L ++ D IL
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAIL 360
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY+ L+ G V + R+F E+ + Y +L+ G+ M EA
Sbjct: 166 VYNTLINGLVGASKFEDAIRVFREMGTM--HCSPTIITYNTLINGFCKNKMFGEAYNLVK 223
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E + + + + + +++ LC + K AL+L++++ ++ P ++ N++
Sbjct: 224 ELL--DKGLDPGVITYSMLMEGLCLDHKVARALQLWNQVTSKGFKP-----DVQMHNILI 276
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G C G+ + A+ ++ M ++C+P+ +S N L++ K+G + A ++ + G+
Sbjct: 277 RGLCSVGKMQLALSLYFDMNLWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLE 336
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYF 217
PD +Y + ++ NR+ D +
Sbjct: 337 PDIISYNITLEGLCSCNRISDAILFL 362
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 109/272 (40%), Gaps = 48/272 (17%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+++E+ E V D VVY ++ GYF
Sbjct: 4 GDIDGAERVYKEIVES--KVSPDAVVYNIMLNGYF------------------------- 36
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
VA K + +L++ M +E N ++ SFN M G G+ +
Sbjct: 37 RVA------------KIKDCFELWEMMGSEGNR------SVSSFNTMMRGLFDNGKVDEV 78
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
I ++ M E D+ ++ L+ CKNG + ++ + KG D + Y +++
Sbjct: 79 ISIWELMNESGFVEDSRTYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMING 138
Query: 204 -CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKM 261
C E N +D + M+ SG +PN+ VYN L+ LV ++A + F ++
Sbjct: 139 LCKEAN-LDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSP 197
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y ++ E +V +LD G
Sbjct: 198 TIITYNTLINGFCKNKMFGEAYNLVKELLDKG 229
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + AE +Y E+ + V+PD Y ++++ F V ++ D + M G R ++
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNIMLNGYFRVAKIKDCFELWEMMGSEGNR-SV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIV-- 286
+ +N ++ L G +DE S +++M + ++D+ +Y ++ G +D+ L ++
Sbjct: 60 SSFNTMMRGLFDNGKVDEVISIWELMNESGFVEDSRTYGILVHGFCKNGYIDKSLHVLEM 119
Query: 287 ----GGILD 291
GG+LD
Sbjct: 120 AEQKGGVLD 128
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNIMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ +M F+ +VD+ + + M +SG + Y LV + G +D++ ++
Sbjct: 60 SSFNTMMRGLFDNGKVDEVISIWELMNESGFVEDSRTYGILVHGFCKNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD + ++ G++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSG 159
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKEIVESKVSPDAVVYNIMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNTM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + + G +E S V G K G ++ + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMNESGFVEDSRTYGILVHG-FCKNGYIDKSLHVLEMAEQK 123
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 146/323 (45%), Gaps = 11/323 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ +D + E+ ++ G+ + Y ++ G+ + G
Sbjct: 223 GCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDR--GIPPNVFTYNCMVHGFCILGQLN 280
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + E VG + V V ++D LC G EA +F+ M + P N+
Sbjct: 281 EATRLFKEMVGRD--VMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEP-----NI 333
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DGYC Q +A +VF M C+P S+N LI+ CK+ + EA+ L E
Sbjct: 334 STYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAE 393
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M K +NPD TY LM + R + F++M GL PNL Y+ L+ + G
Sbjct: 394 MYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGH 453
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
LDEA M KKL+ + + +++ + GKL+ E+ + DG
Sbjct: 454 LDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTV 513
Query: 304 FVKGELSKEGREEEVVKLMEKKE 326
+KG L KEG +E L K E
Sbjct: 514 MIKG-LLKEGLSDEAYDLFRKME 535
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 154/333 (46%), Gaps = 11/333 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF G ++ L+ G +G LF E+ + G + + Y +++ G
Sbjct: 149 MFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR--GHEPNVISYNTIINGLCKT 206
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A++ + + E + K V N+++D+LC + ++A++ M + PP
Sbjct: 207 GNTSMAVDVFKKM--EQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPP--- 261
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N M G+C G+ +A +F++M PDT++ L+D LCK GM++EA
Sbjct: 262 --NVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARL 319
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M++KGV P+ TY LMD +++ F M+ G P + YN L+
Sbjct: 320 VFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFC 379
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ +DEAKS M K L D +Y +M+ L G+ E L I + G +
Sbjct: 380 KSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLV 439
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
+ G K G +E +KL++ + +K E
Sbjct: 440 TYSILLDG-FCKHGHLDEALKLLKSMQEKKLEP 471
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +++ LC D A+ + +M P +FN + +G C +G+ K+A+E+F
Sbjct: 127 NVLINCLCRLNHVDFAVSILGKMFKLGIHPTA-----STFNALINGLCNEGKIKEAVELF 181
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M P+ +S+N +I+ LCK G + A +++ +M G PD TY ++D+ +
Sbjct: 182 NEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKD 241
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SY 266
V+D + +M+D G+ PN+ YN +V +G L+EA F MV + M D +
Sbjct: 242 RLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTL 301
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIE 296
++ L G + E +V + + G+E
Sbjct: 302 TILVDGLCKEGMVSEA-RLVFETMTEKGVE 330
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 130/298 (43%), Gaps = 41/298 (13%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+ D V + L+ G ++G +FE + EK GV + Y +LM GY ++ + EA
Sbjct: 295 MPDTVTLTILVDGLCKEGMVSEARLVFETMTEK--GVEPNISTYNALMDGYCLQRLMNEA 352
Query: 67 ---------------MECYNEAV-GENSSVKMS-----------------AVANNSVLDA 93
+ YN + G S +M V ++++
Sbjct: 353 KKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 412
Query: 94 LCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
LC G+ EAL +F M + P NL +++++ DG+C G +A+++ + M E
Sbjct: 413 LCQFGRPKEALNIFKEMCSYGLLP-----NLVTYSILLDGFCKHGHLDEALKLLKSMQEK 467
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
+ P+ + LI+ + G L A+EL+ ++ G+ P TY +++ + D+
Sbjct: 468 KLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEA 527
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
FRKM D G PN YN ++ +Q A D MV K+ + ++++ ++
Sbjct: 528 YDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 2/218 (0%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ S NV+ + C A+ + KM + P +FN LI+ LC G + EA EL+
Sbjct: 122 NVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELF 181
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM +G P+ +Y +++ + F+KM +G +P++ YN ++ L +
Sbjct: 182 NEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKD 241
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
++++A F M+ + + + +Y M+ G+L+E + ++ + + L
Sbjct: 242 RLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTL 301
Query: 302 QEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
V G L KEG E + E + E A
Sbjct: 302 TILVDG-LCKEGMVSEARLVFETMTEKGVEPNISTYNA 338
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 92/210 (43%), Gaps = 12/210 (5%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
V+NNS N D+AL F RM + P ++ F + + ++ +
Sbjct: 60 VSNNST------NISIDDALASFYRMVRMNPRP-----SVAEFGKFLGSFAKKKQYSTVV 108
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
+ +M + + + S N LI+ LC+ + A + G+M G++P T+ L++
Sbjct: 109 SLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGL 168
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
++ + F +MV G PN+ YN ++ L + G A F M + K D
Sbjct: 169 CNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDV 228
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y ++ +L +++ +E + +LD G
Sbjct: 229 VTYNTIIDSLCKDRLVNDAMEFLSEMLDRG 258
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V+SY +L GF + D L E+ K + D V Y +LM+G G +EA+
Sbjct: 366 PGVHSYNILINGFCKSRRMDEAKSLLAEMYHK--ALNPDTVTYSTLMQGLCQFGRPKEAL 423
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK--------- 118
+ E + + + V + +LD C +G DEALKL M+ + P
Sbjct: 424 NIFKEMC--SYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIE 481
Query: 119 ------RLAV---------------NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
+L V + ++ VM G +G +A ++FRKM + P
Sbjct: 482 GMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 541
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
++ S+N +I +N + A L EM K + + T+ +L+D
Sbjct: 542 NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 144/280 (51%), Gaps = 11/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D + +S L+ G+ D +L E+ + G+V++ + Y +L+ G+
Sbjct: 379 MATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRR--GLVANTITYTTLIHGFCQL 436
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEH 114
G A++ E + +S V + V N++LD LCNNGK +AL++F M+ +
Sbjct: 437 GNLNAALDLLQEMI--SSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDAS 494
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
+P + ++ ++N++ G +G+F +A E++ +M PDT+++N++ID LCK
Sbjct: 495 HPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSR 554
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L EA +++ M KG +PD T+ L++ +V RV DG F +M G+ N Y
Sbjct: 555 LDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRT 614
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
L+ QVG ++ A F M+ + D + + M+ L
Sbjct: 615 LIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 156/328 (47%), Gaps = 10/328 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ ++ LM G R+G L + + E G+ + + YG+++ G G A+
Sbjct: 178 IAFTTLMNGLCREGRVVEAVALLDRMVED--GLQPNQITYGTIVDGMCKMGDTVSALNLL 235
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + E S +K + V ++++D L +G+ +A LF M+ + P NL ++N M
Sbjct: 236 RK-MEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISP-----NLFTYNCM 289
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+C GR+ +A + R+M E + SPD ++F+ LI+ L K G EAEELY EM +G+
Sbjct: 290 INGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ TY ++D + NR+D F M G P++ ++ L+ +D+
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMK 409
Query: 251 FFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
M ++ L + +Y ++ G L+ L+++ ++ G + G L
Sbjct: 410 LLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDG-L 468
Query: 310 SKEGREEEVVKLMEKKEREKAEAKAREA 337
G+ ++ +++ + ++ K + A
Sbjct: 469 CNNGKLKDALEMFKVMQKSKMDLDASHP 496
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 144/296 (48%), Gaps = 19/296 (6%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+YS ++ G +DG LF E++EK G+ + Y ++ G+ G EA
Sbjct: 249 VIYSAIIDGLWKDGRQTDAQNLFSEMQEK--GISPNLFTYNCMINGFCSSGRWSEAQRLL 306
Query: 71 NEAVGENSSVKMS--AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
E KMS V + +++AL GKF EA +L++ M P+ + N ++N
Sbjct: 307 REMFER----KMSPDVVTFSVLINALVKEGKFFEAEELYNEML-----PRGIIPNTITYN 357
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
M DG+ Q R A +F M CSPD ++F+ LID C + + +L EMS +
Sbjct: 358 SMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRR 417
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ + TY L+ ++ ++ ++M+ SG+ PN+ N L+ L G L +A
Sbjct: 418 GLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDA 477
Query: 249 KSFFDIMVKKLKMD-DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
F +M +K KMD DAS+ F + + IL + G++++G +EEL E
Sbjct: 478 LEMFKVM-QKSKMDLDASHPF--NDVEPDVQTYNIL--ICGLINEGKFSEAEELYE 528
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 119/235 (50%), Gaps = 13/235 (5%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
V + +L+ G ++ EA+ +++ N +A ++++ LC G+ EA+ L
Sbjct: 147 VTFSTLLHGLCVEDRVSEALHFFHQICKPN------VIAFTTLMNGLCREGRVVEAVALL 200
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY-RCSPDTLSFNNLI 166
DRM + P ++ ++ + DG C G A+ + RKM E R P+ + ++ +I
Sbjct: 201 DRMVEDGLQPNQI-----TYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAII 255
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
D L K+G +A+ L+ EM +KG++P+ +TY +++ R + R+M + +
Sbjct: 256 DGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMS 315
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
P++ ++ L+ LV+ G EA+ ++ M+ + + + +Y M+ S +LD
Sbjct: 316 PDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLD 370
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 127/297 (42%), Gaps = 21/297 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF + D V +S L+ V++G L+ E+ + G++ + + Y S++ G+ +
Sbjct: 309 MFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPR--GIIPNTITYNSMIDGFSKQ 366
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ A + + S + + ++D C + D+ +KL M + L
Sbjct: 367 NRLDAAERMFYLMATKGCSP--DVITFSILIDGYCGAKRVDDGMKLLHEMSR-----RGL 419
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++ + G+C G A+++ ++M P+ ++ N L+D LC NG L +A E
Sbjct: 420 VANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALE 479
Query: 181 LYGEMSDKG-----------VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
++ M V PD TY +L+ + + + +M GL P+
Sbjct: 480 MFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDT 539
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
YN ++ L + LDEA FD M K D ++ ++ G++ + LE+
Sbjct: 540 ITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEV 596
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 94/194 (48%), Gaps = 11/194 (5%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
++ C+ K AL F ++ P +L +F+ + G C + R +A+ F +
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHP-----SLVTFSTLLHGLCVEDRVSEALHFFHQ 171
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
+ C P+ ++F L++ LC+ G + EA L M + G+ P++ TYG ++D ++
Sbjct: 172 I----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 227
Query: 210 VDDGATYFRKMVD-SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
RKM + S ++PN+ +Y+ ++ L + G +A++ F M +K + + +Y
Sbjct: 228 TVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYN 287
Query: 268 FMMKALSDGGKLDE 281
M+ G+ E
Sbjct: 288 CMINGFCSSGRWSE 301
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DAI++F M R P + F L+ + + L+ +M + + + Y++ +L+
Sbjct: 59 DAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILI 118
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
+++ + F K+ G P+L ++ L+ L + EA FF + K
Sbjct: 119 KCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKP--- 175
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ ++ +M L G++ E + ++ +++DG
Sbjct: 176 NVIAFTTLMNGLCREGRVVEAVALLDRMVEDG 207
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 165/321 (51%), Gaps = 17/321 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V YS ++ GF G S+ LF+++ E+ V+ D V + L+ G +
Sbjct: 143 MVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVER--NVMPDTVTFNILVDGLSKE 200
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM EA +C E + E V+ + N+++D C+ + DEA KLF+ M + P
Sbjct: 201 GMILEA-QCVFETMIEKG-VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAP--- 255
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+N++ G+C GR +A + +M +PDT++++ L+ C++G +A++
Sbjct: 256 --SVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQK 313
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM G+ PD TY +++D + +D+ + M +S + PN+ +Y L+ +
Sbjct: 314 LLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMC 373
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEI-----VGGILDDGG 294
G L+ A+ F ++ VK ++ D +Y M+ L GG +E E+ V G L +
Sbjct: 374 NFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPN-S 432
Query: 295 IEFSEELQEFVK-GELSKEGR 314
++ +Q F++ G+ S GR
Sbjct: 433 CTYNVIIQGFLRNGDTSNAGR 453
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 160/338 (47%), Gaps = 21/338 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF G + V +S L+ G +LF+E+ + G D + Y +++ G
Sbjct: 38 MFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKM--GYEPDVITYSTIINGLCKM 95
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A++ + E K + V ++++D+LC + EA++ M N P
Sbjct: 96 GSTTMAIQLLKKM--EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP--- 150
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +++ + G+C GR +A +F++M E PDT++FN L+D L K GM+ EA+
Sbjct: 151 --NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQC 208
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M +KGV P+ TY LMD +++D+ F MV G P++ YN L+
Sbjct: 209 VFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHC 268
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV-----GGILDDGG 294
+ G +DEAK M K L D +Y +MK G+ + +++ G+L D
Sbjct: 269 KSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPD-L 327
Query: 295 IEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
+ +S V L K+G +E +L++ + K E
Sbjct: 328 MTYS-----IVLDGLCKQGHLDEAFELLKAMQESKIEP 360
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 127/286 (44%), Gaps = 14/286 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + Y+ LM G+ D +LF + K G Y L+KG+
Sbjct: 213 MIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRK--GCAPSVRSYNILIKGHCKS 270
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA E + ++ V ++++ C +G+ +A KL + M++ P
Sbjct: 271 GRIDEAKGLLAEM--SHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLP--- 325
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L +++++ DG C QG +A E+ + M E + P+ + LI +C G L A E
Sbjct: 326 --DLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARE 383
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ + KG+ PD TY +++ + ++ FR M G PN YN ++ +
Sbjct: 384 LFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFL 443
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ G A + MV + D ++++ LSD DEI+ +
Sbjct: 444 RNGDTSNAGRLIEEMVGRGFSADSSTFQM----LSDLESRDEIISL 485
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 87/191 (45%), Gaps = 4/191 (2%)
Query: 126 SFNVMADGYC--GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + +C F A V M + P+ ++F+ L++ L + +A +L+
Sbjct: 12 TLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFD 71
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G PD TY +++ ++ +KM + G +PN+ VY+ ++ L +
Sbjct: 72 EMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDK 131
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++ EA F MV + + + +Y ++ + G+ +E + +++ + +
Sbjct: 132 LITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFN 191
Query: 303 EFVKGELSKEG 313
V G LSKEG
Sbjct: 192 ILVDG-LSKEG 201
>gi|255660998|gb|ACU25668.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 376
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 140/282 (49%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G G D V ++E +K+ V D + YG L+ G+ G +++
Sbjct: 62 FNIMMRGLFDKGKVDEVISIWELMKK--SDFVEDSITYGILVHGFCKNGYINKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D+A+ + + M P N +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKP-----NAHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG RCSP +++N LI+ LCKN M EA +L EM +KG+NP
Sbjct: 173 GLVGASKFEDAIRVFREMGTVRCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
TY +LM ++V+ + +++ G +P++ ++N L+ L VG A S +
Sbjct: 233 SVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLY 292
Query: 253 -DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
D+ K + ++ +M+ G + L I +L +G
Sbjct: 293 JDMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNG 334
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 136/308 (44%), Gaps = 12/308 (3%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+++E+ E V D VVY +++ GYF ++ E + E +G + +S
Sbjct: 4 GDIDGAERVYKEIVE--SKVSPDAVVYNAMLNGYFRVAKIKDCFELW-EMMGNEGNRSVS 60
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ N ++ L + GK DE + +++ MK + ++ ++ G+C G +
Sbjct: 61 SF--NIMMRGLFDKGKVDEVISIWELMKKSDFVEDSI-----TYGILVHGFCKNGYINKS 113
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ V + D +++ +I+ LCK L +A + +M G P+ + Y L++
Sbjct: 114 LHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLING 173
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
++ +D FR+M P + YN L+ L + M EA M++K L
Sbjct: 174 LVGASKFEDAIRVFREMGTVRCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPS 233
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+Y +MK L K++ L++ ++ G + ++ + L G+ + + L
Sbjct: 234 VITYSMLMKGLCLDHKVERALQLWNQVISK-GFKPDVQMHNILIHGLCSVGKTQLALSLY 292
Query: 323 EKKEREKA 330
R K
Sbjct: 293 JDMNRWKC 300
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 128/288 (44%), Gaps = 44/288 (15%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
FV D + Y L+ GF ++G + + E + E+ GGV+ D Y +++ G + ++
Sbjct: 90 FVEDSITYGILVHGFCKNGYINKSLHVLE-MAEQKGGVL-DAFAYSAMINGLCKEANLDK 147
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A+ N+ + S K +A N++++ L KF++A+++F M P +
Sbjct: 148 AVSVLNDMI--KSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVRCSPTII----- 200
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + +G C F +A ++ ++M E +P ++++ L+ LC + + A +L+ ++
Sbjct: 201 TYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQV 260
Query: 186 SDKGVNPDEYTYGLLMDA-C------------FEVNR----------------------V 210
KG PD + +L+ C ++NR +
Sbjct: 261 ISKGFKPDVQMHNILIHGLCSVGKTQLALSLYJDMNRWKCAPNLVTHNTLMEGFYKDGDI 320
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+ + +++ +GL P++ YN + L + +A F V+K
Sbjct: 321 RNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDAVRK 368
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDG---VVYGSLMKGY 57
M G + VY+ L+ G V + R+F E+ G V + Y +L+ G
Sbjct: 155 MIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREM-----GTVRCSPTIITYNTLINGL 209
Query: 58 FMKGMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
M EA + E + G N SV + + ++ LC + K + AL+L++++ ++
Sbjct: 210 CKNEMFGEAYDLVKEMLEKGLNPSV----ITYSMLMKGLCLDHKVERALQLWNQVISKGF 265
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P ++ N++ G C G+ + A+ ++ M ++C+P+ ++ N L++ K+G +
Sbjct: 266 KP-----DVQMHNILIHGLCSVGKTQLALSLYJDMNRWKCAPNLVTHNTLMEGFYKDGDI 320
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
A ++ + G+ PD +Y + + NR+ D + V + P
Sbjct: 321 RNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDAVRKKIVPT 373
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ Y+ L+ G ++ + L +E+ EK G+ + Y LMKG + E A++ +
Sbjct: 200 ITYNTLINGLCKNEMFGEAYDLVKEMLEK--GLNPSVITYSMLMKGLCLDHKVERALQLW 257
Query: 71 NEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
N+ + G V+M +N ++ LC+ GK AL L+ M P NL + N
Sbjct: 258 NQVISKGFKPDVQM----HNILIHGLCSVGKTQLALSLYJDMNRWKCAP-----NLVTHN 308
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ +G+ G ++A+ ++ ++ PD +S+N + LC + +A + K
Sbjct: 309 TLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDAVRK 368
Query: 189 GVNPDEYT 196
+ P + T
Sbjct: 369 KIVPTKIT 376
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + AE +Y E+ + V+PD Y +++ F V ++ D + M + G R ++
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGNEGNR-SV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIV-- 286
+ +N ++ L G +DE S +++M K ++D+ +Y ++ G +++ L ++
Sbjct: 60 SSFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGYINKSLHVLEM 119
Query: 287 ----GGILD 291
GG+LD
Sbjct: 120 AEQKGGVLD 128
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M ++G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGNEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M S + Y LV + G ++++ ++
Sbjct: 60 SSFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGYINKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD+ + ++ ++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSG 159
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 148/322 (45%), Gaps = 14/322 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++GF D + Y YLM G + G D LF + + V++ +L+ G+
Sbjct: 307 MLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK------PTSVIFNTLIHGFVTH 360
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A ++ V V NS++ G AL++ M+N+ P
Sbjct: 361 GRLDDAKAVLSDMVTSYGIVP-DVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKP--- 416
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ S+ ++ DG+C G+ +A + +M P+T+ FN LI CK + EA E
Sbjct: 417 --NVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 474
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM KG PD YT+ L+ EV+ + R M+ G+ N YN L+ +
Sbjct: 475 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 534
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G + EA+ + MV + +D+ +Y ++K L G++D+ + +L DG + S
Sbjct: 535 RRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSI 594
Query: 300 ELQEFVKGELSKEGREEEVVKL 321
+ G L + G EE V+
Sbjct: 595 SCNILING-LCRSGMVEEAVEF 615
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 10/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V ++ L+ F ++ +F E+ K G D + SL+ G +
Sbjct: 448 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK--GCKPDVYTFNSLISGLCEVDEIK 505
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ + + E V + V N++++A G+ EA KL + M + + +
Sbjct: 506 HALWLLRDMISE--GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEI---- 559
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C G A +F KM P ++S N LI+ LC++GM+ EA E E
Sbjct: 560 -TYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKE 618
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +G PD T+ L++ R++DG T FRK+ G+ P+ YN L+ L + G
Sbjct: 619 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGF 678
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ +A D ++ +D ++ ++++L LD
Sbjct: 679 VYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 110/216 (50%), Gaps = 9/216 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G VA+ V Y+ L+ F+R G+ +L E+ G + D + Y SL+KG
Sbjct: 514 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV--FQGSLLDEITYNSLIKGLCRA 571
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A + + + + + S+++ N +++ LC +G +EA++ M + P
Sbjct: 572 GEVDKARSLFEKMLRD--GLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP--- 626
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +FN + +G C GR +D + +FRK+ PDT+++N L+ LCK G + +A
Sbjct: 627 --DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACL 684
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
L E + G P++ T+ +L+ + +D Y
Sbjct: 685 LLDEGIEDGFVPNDRTWSILLQSLVPQETLDRRTFY 720
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 128/292 (43%), Gaps = 11/292 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG+ VY L+ +G+ + RL ++K++ G+V ++ S+M+ Y G
Sbjct: 99 KGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDE--GIVFKESLFISIMRDYDKAGFP 156
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ E + S + + + N VL+ L + A +F M + PP
Sbjct: 157 GQTTRLMLE-MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP-----T 210
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +F V+ C A+ V R M ++ C P+++ + LI L K + EA +L
Sbjct: 211 LFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 270
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G PD T+ ++ + +R+++ A +M+ G P+ Y L+ L ++G
Sbjct: 271 EMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIG 330
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+D AK D+ + K + ++ G+LD+ ++ ++ GI
Sbjct: 331 RVDAAK---DLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 379
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 155/321 (48%), Gaps = 17/321 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDG-----DSDGVFRLFEELKEKL-GGVVSDGVVYGSLMKGYF 58
G D V Y+ ++ GF ++G + + + E L + GV+ D + Y S++ GY
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 255
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G +EA+ + + V+ + V +S+++ LC NG+ EA K+FD M P
Sbjct: 256 SSGQPKEAIGTLKKM--RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP- 312
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ ++ + G+C +GR ++ ++F M PD +++N LID C G + EA
Sbjct: 313 ----DIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 368
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+L M GV PD TYG L++ V+R+DD F++MV SG+ PN+ YN ++
Sbjct: 369 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 428
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI-LDDGGIE 296
L AK + + K +++ ++Y ++ L DE L + + L D ++
Sbjct: 429 LFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--LQ 486
Query: 297 FSEELQEFVKGELSKEGREEE 317
+ G L K GR +E
Sbjct: 487 LETRTFNIMIGALLKCGRMDE 507
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 148/308 (48%), Gaps = 10/308 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V YS LM ++G S ++F+ + ++ G+ D Y +L++G+ +G
Sbjct: 274 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR--GLEPDIATYRTLLQGHCKEGRVI 331
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E+ + ++ V VK + N+++D C GK DEA KL M + P ++
Sbjct: 332 ESEKLFDLMV--RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP-----DI 384
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + +GYC R DA+ +F++M SP+ +++N ++ L A A+ELY
Sbjct: 385 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 444
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ G + TY +++ + N D+ F+ + + L+ +N ++G L++ G
Sbjct: 445 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 504
Query: 245 LDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+DEAK F L D +Y M + L + G L+E+ ++ + ++G S L
Sbjct: 505 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS 564
Query: 304 FVKGELSK 311
V+ L +
Sbjct: 565 IVRKLLQR 572
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 139/328 (42%), Gaps = 47/328 (14%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V++Y +L R G D F + +K G D + + L+KG +AM
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKK--GFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH---NPPKRLAVN- 123
+ + E + + N++L LC+ + EAL+L M ++ +PP ++ N
Sbjct: 148 DIVLRRMTELGCIP-DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206
Query: 124 -------------------------------------LGSFNVMADGYCGQGRFKDAIEV 146
++N + GYC G+ K+AI
Sbjct: 207 VLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 266
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
+KM P+ +++++L++ LCKNG EA +++ M+ +G+ PD TY L+ +
Sbjct: 267 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCK 326
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDAS 265
RV + F MV G++P++ YN L+ G +DEA MV +K D +
Sbjct: 327 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 386
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDG 293
Y ++ ++D+ L + ++ G
Sbjct: 387 YGTLINGYCRVSRMDDALALFKEMVSSG 414
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 126/273 (46%), Gaps = 10/273 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + Y+ L+ G G D +L + GV D V YG+L+ GY
Sbjct: 340 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV--GVKPDIVTYGTLINGYCRV 397
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A+ + E V +S V + + N +L L + + A +L+ +
Sbjct: 398 SRMDDALALFKEMV--SSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGT----- 450
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ L ++N++ G C +A+ +F+ + +T +FN +I L K G + EA++
Sbjct: 451 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKD 510
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ S G+ PD TY L+ + E +++ F M ++G + + N +V KL+
Sbjct: 511 LFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 570
Query: 241 QVGMLDEAKSF-FDIMVKKLKMDDASYKFMMKA 272
Q G + A ++ F I K ++ ++ F++++
Sbjct: 571 QRGDITRAGTYLFMIDEKHFSLEASTASFLLES 603
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 11/127 (8%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V P +TY +L+ C R+D G +V G R + +
Sbjct: 71 AAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITF 130
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASYKFMMKALSDGGKLDEILEIVG 287
L+ L +A DI+++++ D SY ++K L D + E LE++
Sbjct: 131 TPLLKGLCADKRTSDA---MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLH 187
Query: 288 GILDDGG 294
+ DD G
Sbjct: 188 MMADDRG 194
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 166/357 (46%), Gaps = 48/357 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ G +R+G D + LF+E+ ++ G+ + + Y L+ GY G +
Sbjct: 201 GCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQ--GMSPNCITYNCLLHGYCSSGKPK 258
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVN 123
EA+ + + + V+ V N+++ LC NG+ EA K+FD M K H P +
Sbjct: 259 EAIGIFRKMCRD--GVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSI--- 313
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + GY +G ++ M PD FN LI K+GM+ EA +
Sbjct: 314 ---YGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFS 370
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN--------------- 228
+M +G++P+ TYG +MDA V +VDD + F +++ GL PN
Sbjct: 371 KMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACD 430
Query: 229 -------LAV-------------YNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYK 267
LAV +N L+ L + GM+ AK+ FD+MV+ ++ D +Y
Sbjct: 431 KWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYT 490
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ GK+DE +++ G++ D G++ +E + K GR E+ L +
Sbjct: 491 TLIDGYCLDGKVDEATKLLEGMVLD-GVKPNEVTYNTIINGYCKNGRIEDACSLFRQ 546
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 156/365 (42%), Gaps = 56/365 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A + +S L+ G D + + LG + Y L+KG + +
Sbjct: 126 GWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALG-CTPNAFSYNILLKGLCDENRSQ 184
Query: 65 EAMECYNEAVGENSS--VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A+ + + +++ V+ +V++ L G+ D+A LFD M ++ P
Sbjct: 185 QALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSP----- 239
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N ++N + GYC G+ K+AI +FRKM PD +++N L+ LCKNG EA +++
Sbjct: 240 NCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVF 299
Query: 183 GEMSDKG-----------------------------------VNPDEYTYGLLMDACFEV 207
M KG PD Y + +L+ A +
Sbjct: 300 DSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKH 359
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
VD+ F KM GL PN+ Y ++ L +VG +D+A S FD ++ + L + +
Sbjct: 360 GMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVF 419
Query: 267 KFMMKALSDGGKLDE----ILEIVGGILDDGGIEFSEELQEFVKGELSKEG---REEEVV 319
+ ++ L K D+ +E++G + I F+ L L KEG R + +
Sbjct: 420 RTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLN-----HLCKEGMVTRAKNIF 474
Query: 320 KLMEK 324
LM +
Sbjct: 475 DLMVR 479
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 137/291 (47%), Gaps = 10/291 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y +M R G D F+ L + G+ +GVV+ +L+ G
Sbjct: 375 QGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISE--GLTPNGVVFRTLIHGLCACDKW 432
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A E E +G + + + N++L+ LC G A +FD M + +
Sbjct: 433 DKAEELAVEMIGR--GICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD-----VQCD 485
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + DGYC G+ +A ++ M P+ +++N +I+ CKNG + +A L+
Sbjct: 486 VITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFR 545
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M+ KGVNP Y ++ F+ R+ + M+ G++ + YN ++ L Q
Sbjct: 546 QMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNN 605
Query: 244 MLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
D+A + F ++ + + + ++ M+ AL GG+ DE ++ +L G
Sbjct: 606 CTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARG 656
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 153/350 (43%), Gaps = 40/350 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D +Y L+ G+ +G + +L + + G D ++ L+ Y
Sbjct: 302 MVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRN--GTQPDHYIFNILIGAYAKH 359
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
GM +EAM +++ + + V +V+DALC GK D+A+ FDR+ +E P
Sbjct: 360 GMVDEAMLAFSKM--RQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGV 417
Query: 118 ------------------KRLAV---------NLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ LAV N FN + + C +G A +F M
Sbjct: 418 VFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLM 477
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
D +++ LID C +G + EA +L M GV P+E TY +++ + R+
Sbjct: 478 VRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRI 537
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFM 269
+D + FR+M G+ P + +Y+ ++ L Q + AK + M+K +K+ +Y +
Sbjct: 538 EDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNII 597
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKGELSKEGREEE 317
++ L D+ L + + I+F + + F + L K GR +E
Sbjct: 598 LQGLCQNNCTDDALRMFHNLCL---IDFHLQNRTFNIMIDALLKGGRHDE 644
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 12/251 (4%)
Query: 84 AVANNSVLDALCNNGKFDEALKL-FDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
A+ + +L LC++ + +A+ + RM P N S+N++ G C + R +
Sbjct: 131 AITFSPLLKGLCHDKRTSDAMDIALRRM-----PALGCTPNAFSYNILLKGLCDENRSQQ 185
Query: 143 AIEVFRKM--GEYR--CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
A+ + M + R C PD +S+ +I+ L + G L +A L+ EM D+G++P+ TY
Sbjct: 186 ALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYN 245
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
L+ + + FRKM G+ P++ YN L+ L + G EA+ FD MVKK
Sbjct: 246 CLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKK 305
Query: 259 -LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
K D + Y ++ + G L ++ +++ ++ G + + + G +K G +E
Sbjct: 306 GHKPDSSIYGTLLHGYATEGYLVQMHQLL-DVMVRNGTQPDHYIFNILIGAYAKHGMVDE 364
Query: 318 VVKLMEKKERE 328
+ K ++
Sbjct: 365 AMLAFSKMRQQ 375
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 139/282 (49%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D + YS L+ G +DG++ F+LF+E+K + G D + + +LM G +
Sbjct: 179 GCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRR--GRKPDSITFTALMDALGKAGRVD 236
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+E +E + VK V N+++ G EA L D MK P ++
Sbjct: 237 DALELLDEM--KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKP-----DV 289
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + G + +A +V +KM + C PDT+++N LI+ L K G+L +A L+
Sbjct: 290 VTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDR 349
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG NPD TY L+ A + RV+ F +M G++P+L Y ++ L + G
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQ 409
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEI 285
+D+A F M K L D +Y + +L GG+ E +I
Sbjct: 410 VDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKI 451
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 36/316 (11%)
Query: 3 VKGFVADPVV-YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
+KGF + VV Y+ L+ + G + LFEELK D V Y L+ G
Sbjct: 1 MKGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKA--AKWTPDVVSYSCLINSLGRAG 58
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP---- 117
E A+E E + K + N+++D L G+FDEAL+L M++ P
Sbjct: 59 KWEAALEVVAEM--QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRT 116
Query: 118 -KRLAVNLG-------------------------SFNVMADGYCGQGRFKDAIEVFRKMG 151
L LG ++N + G GR + A+E+ +M
Sbjct: 117 YNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEME 176
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ C PD +++++LI L K+G +A +L+ EM +G PD T+ LMDA + RVD
Sbjct: 177 RHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVD 236
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
D +M + G++P + YN L+ +VG L EA + D M + K D +Y ++
Sbjct: 237 DALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLI 296
Query: 271 KALSDGGKLDEILEIV 286
L +LDE +++
Sbjct: 297 TGLIKASQLDEACQVL 312
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 144/304 (47%), Gaps = 14/304 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D + ++ LM + G D L +E+KE+ GV V Y +L+ G+ G
Sbjct: 213 RGRKPDSITFTALMDALGKAGRVDDALELLDEMKER--GVKPGVVTYNALIAGFGKVGDL 270
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA +E + + K V + ++ L + DEA ++ +M+ E PP +
Sbjct: 271 VEAYNLLDEM--KRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTI--- 325
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + +G G DA +F +M C+PD ++++ LI L K + A L+
Sbjct: 326 --TYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFE 383
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G+ PD +TY ++ + +VDD F +M GL P++ YN + L + G
Sbjct: 384 EMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGG 443
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFS 298
EA+ F+ M + L D A+Y ++ LS ++D+ ++ +++ G ++F
Sbjct: 444 RFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFD 503
Query: 299 EELQ 302
E L+
Sbjct: 504 ECLE 507
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 10/278 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V YS L+ + + LFEE++ G+ D Y S++
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESV--GIQPDLFTYCSIITVLGKA 407
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A ++E G+ S + + N+ L++L G+F EA K+F+ MK P
Sbjct: 408 GQVDDADRLFSEMRGKGLSPDV--ITYNAFLNSLGRGGRFKEARKIFEDMKESGLLP--- 462
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + G DA + +++ E C+ D+L F+ ++ L G + EA E
Sbjct: 463 --DVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHE 520
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L + KG+ P +Y L+DA + RV + + + G +P++ Y+ L+ L
Sbjct: 521 LLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALG 580
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
Q G +D A + M K+ LK+ SY +++ L D G
Sbjct: 581 QTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 141/327 (43%), Gaps = 45/327 (13%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V Y+ L+ GF + GD + L +E+K G D V Y L+ G
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRN--GCKPDVVTYSCLITGLIKASQL 305
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + + E + N++++ L G ++A +LFDRMK++ P +
Sbjct: 306 DEACQVLKKM--EKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNP-----D 358
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +++ + R + A +F +M PD ++ ++I L K G + +A+ L+
Sbjct: 359 VVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFS 418
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KG++PD TY +++ R + F M +SGL P++A Y+ L+ L +
Sbjct: 419 EMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTK 478
Query: 244 MLDEAKSFFDIMVKK------LKMDD------------------------------ASYK 267
+D+A ++++ LK D+ +SY
Sbjct: 479 EVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYN 538
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGG 294
++ AL+ G++ E + + + GG
Sbjct: 539 ALIDALAKAGRVSEAFNTLEDLKEQGG 565
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 2/206 (0%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ ++N + + G+ ++A +F ++ + +PD +S++ LI+ L + G A E+
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM KG P+ +TY L+D + + D+ +M D+G P++ YN L+ L +
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G L EA + F M ++ + D +Y ++ L G+ + +E++ + G
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187
Query: 302 QEFVKGELSKEGREEEVVKLMEKKER 327
+ G L K+G + KL ++ +R
Sbjct: 188 SSLITG-LGKDGETVKAFKLFQEMKR 212
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
SP+ +++N+L++ L K G EA+ L+ E+ PD +Y L+++ + +
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALS 274
+M G +PNL YN LV L + G DEA M + D +Y ++ L
Sbjct: 66 VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
G+L E + + + G + + + G L K GR ++ ++L+E+ ER
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYG-LGKVGRSQKAMELLEEMERH 178
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 148/322 (45%), Gaps = 14/322 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++GF D + Y YLM G + G D LF + + + V++ +L+ G+
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK------PEIVIFNTLIHGFVTH 366
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A ++ V V NS++ G AL++ M+N+ P
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVP-DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP--- 422
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ S+ ++ DG+C G+ +A V +M P+T+ FN LI CK + EA E
Sbjct: 423 --NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM KG PD YT+ L+ EV+ + R M+ G+ N YN L+ +
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G + EA+ + MV + +D+ +Y ++K L G++D+ + +L DG +
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI 600
Query: 300 ELQEFVKGELSKEGREEEVVKL 321
+ G L + G EE V+
Sbjct: 601 SCNILING-LCRSGMVEEAVEF 621
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 109/210 (51%), Gaps = 7/210 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
GVV++ V Y +L+ + +G +EA + NE V + S + + NS++ LC G+ D
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP--LDEITYNSLIKGLCRAGEVD 581
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A LF++M + + P + S N++ +G C G ++A+E ++M +PD ++
Sbjct: 582 KARSLFEKMLRDGHAPSNI-----SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 636
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
FN+LI+ LC+ G + + ++ ++ +G+ PD T+ LM + V D + +
Sbjct: 637 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI 696
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
+ G PN ++ L+ ++ LD + +
Sbjct: 697 EDGFVPNHRTWSILLQSIIPQETLDRRRFY 726
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 9/249 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V ++ L+ F ++ +F E+ K G D + SL+ G +
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK--GCKPDVYTFNSLISGLCEVDEIK 511
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ + + E V + V N++++A G+ EA KL + M + +P +
Sbjct: 512 HALWLLRDMISE--GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI---- 565
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C G A +F KM +P +S N LI+ LC++GM+ EA E E
Sbjct: 566 -TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +G PD T+ L++ R++DG T FRK+ G+ P+ +N L+ L + G
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
Query: 245 LDEAKSFFD 253
+ +A D
Sbjct: 685 VYDACLLLD 693
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 127/284 (44%), Gaps = 11/284 (3%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY L+ +G+ + RL ++K++ G+V ++ S+M+ Y G +
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDE--GIVFKESLFISIMRDYDKAGFPGQTTRLML 170
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E + S + + + N VL+ L + A +F M + PP L +F V+
Sbjct: 171 E-MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP-----TLFTFGVVM 224
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
+C A+ + R M ++ C P+++ + LI L K + EA +L EM G
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
PD T+ ++ + +R+++ A +M+ G P+ Y L+ L ++G +D AK
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK-- 342
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
D+ + K + + ++ G+LD+ ++ ++ GI
Sbjct: 343 -DLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 142/313 (45%), Gaps = 13/313 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G ++ + D LFE +K V Y +L+ G F G E AM +
Sbjct: 11 VTYNSLIDGLCKNNEPDRAQELFEHMKSV--ECSPSMVTYNTLLDGLFRTGKLERAMALF 68
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E + S ++ N ++ LC GK + AL+ F +M + +P N+ +++V+
Sbjct: 69 QEMLDRRSH---DVISFNILVTGLCRAGKIETALEFFRKMDDRCSP------NVITYSVL 119
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DG C R A+E+ M CSPD +++ L+D LCK +A A E+ EM D G
Sbjct: 120 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 179
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ TY L+ RV D R M G PN+ Y L+ L +VG + +A +
Sbjct: 180 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239
Query: 251 FFDIMVKKLKMDDAS-YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
M+ K D Y ++ L ++DE + ++ + GGI+ V L
Sbjct: 240 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV-SGGIKPDVVTYSSVIYGL 298
Query: 310 SKEGREEEVVKLM 322
+ R +E +L+
Sbjct: 299 CRSNRLDEACRLL 311
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 32/272 (11%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN------------------- 123
+ V NS++D LC N + D A +LF+ MK+ P + N
Sbjct: 9 NVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALF 68
Query: 124 ----------LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
+ SFN++ G C G+ + A+E FRKM + RCSP+ ++++ LID LCK
Sbjct: 69 QEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSVLIDGLCKAN 127
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
+++A EL M +G +PD TY +L+D + ++V R+M+D+G PNL YN
Sbjct: 128 RVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYN 187
Query: 234 RLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
L+ L + + +A + D+ + + +Y ++ L G++ + ++ ++D
Sbjct: 188 SLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK 247
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
GG + G L K + +E + L+ +
Sbjct: 248 GGTPDLMIYNMLING-LCKADQVDESIALLRR 278
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 139/319 (43%), Gaps = 24/319 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V + V Y+ L+ G R L ++ + G + V YG+L+ G
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR--GCTPNVVTYGTLIDGLCKV 231
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A + + + + + + N +++ LC + DE++ L R + P
Sbjct: 232 GRVKDACAMLADMIDKGGTPDL--MIYNMLINGLCKADQVDESIALLRRAVSGGIKP--- 286
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + G C R +A + + C PD + ++ LID LCK G + EA +
Sbjct: 287 --DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 344
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY M+ G + D TY L+D + RVD+ +MV G P+ YN L+ L
Sbjct: 345 LYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 404
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALS-----DGGKLDEILEIV-GGILDDG 293
+ LDEA + M + A +Y ++ + D LD E++ G++ D
Sbjct: 405 DLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDH 464
Query: 294 --------GIEFSEELQEF 304
G++ S++L E
Sbjct: 465 ITYSILLEGLKKSKDLHEL 483
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 11/259 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D ++Y+ L+ G + D L + GG+ D V Y S++ G
Sbjct: 244 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLR--RAVSGGIKPDVVTYSSVIYGLCRS 301
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA C ++ + ++++D LC GK DEA L++ M +
Sbjct: 302 NRLDEA--CRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG-----C 354
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + DG C GR +A + +M P T+++N+LI LC L EA E
Sbjct: 355 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 414
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT-YFRKMVDSGLRPNLAVYNRLVGKL 239
L EM P TY +L+ + RVD A YF++M+D+G+ P+ Y+ L+ L
Sbjct: 415 LVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGL 474
Query: 240 VQVGMLDEAKSF-FDIMVK 257
+ L E + D MV+
Sbjct: 475 KKSKDLHELRHLVLDQMVQ 493
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M ++ C P+ +++N+LID LCKN A+EL+ M +P TY L+D F +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
++ F++M+D ++ +N LV L + G ++ A FF M + + +Y +
Sbjct: 61 LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVL 119
Query: 270 MKALSDGGKLDEILEIV 286
+ L ++ + +E++
Sbjct: 120 IDGLCKANRVSQAVELL 136
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 135/281 (48%), Gaps = 10/281 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V ++ LM G R+G L + + E G + V YG+++ G
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVEN--GHQPNEVTYGTIVNGMCKM 58
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+ + + S +K V +++D LC +G +A LF M ++ P
Sbjct: 59 GDTDSALNLLRKM--DESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFP--- 113
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N M DG C G++ DA ++ R M E PD ++FN LI+ K G ++EAEE
Sbjct: 114 --NVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEE 171
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY EM + + PD TY L+D + +R+DD F MV G PN+ N L+G
Sbjct: 172 LYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCC 231
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
+ +D+ M+++ L D SY ++ G L+
Sbjct: 232 RAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLN 272
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 128/260 (49%), Gaps = 9/260 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y ++ G + GD+D L ++ E + +D V+Y +++
Sbjct: 36 MVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMDE--SHIKADVVIYTAIIDRLCKD 93
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + E + + + + N ++D C+ GK+ +A +L M + P
Sbjct: 94 GHHSKAQNLFTEM--HDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNVDP--- 148
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +FN + + + +G+ +A E++R+M PDT+++N+LID CK+ L +A+
Sbjct: 149 --DVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKH 206
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M KG +P+ T L+ C RVDDG +M+ GL P+ YN L+
Sbjct: 207 IFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFC 266
Query: 241 QVGMLDEAKSFFDIMVKKLK 260
Q G L+ A+ F M+ +++
Sbjct: 267 QAGDLNAAQDLFQEMISQVR 286
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 158/325 (48%), Gaps = 16/325 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++GF D + Y YLM G R G D L ++ + V+Y +L+ GY
Sbjct: 301 MLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN------PNTVLYNTLISGYVAS 354
Query: 61 GMEEEAMEC-YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G EEA + YN V + + A N ++D L G AL+L + M KR
Sbjct: 355 GRFEEAKDLLYNNMV--IAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMV-----AKR 407
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ ++ ++ +G+C QGR ++A E+ M S +T+ +N LI LCK+G + EA
Sbjct: 408 FEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEAL 467
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L+GEMS KG PD YT+ L++ + +++++ + + M G+ N YN LV
Sbjct: 468 QLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAF 527
Query: 240 VQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ + +A D ++ + +D+ +Y ++KAL G +++ L + +L G
Sbjct: 528 LMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTI 587
Query: 299 EELQEFVKGELSKEGREEEVVKLME 323
+ G L + G+ + +K ++
Sbjct: 588 ISCNILISG-LCRTGKVNDALKFLQ 611
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 116/238 (48%), Gaps = 9/238 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D ++ L+ G ++ + L+ ++ L GV+++ V Y +L+ + M+
Sbjct: 476 KGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF--LEGVIANTVTYNTLVHAFLMRDSI 533
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A + +E + + + N ++ ALC G ++ L LF+ M + P +
Sbjct: 534 QQAFKLVDEMLFRGCP--LDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTII--- 588
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S N++ G C G+ DA++ + M +PD +++N+LI+ LCK G + EA L+
Sbjct: 589 --SCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFN 646
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
++ +G+ PD TY L+ +D K VDSG PN ++ L+ +V+
Sbjct: 647 KLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 137/296 (46%), Gaps = 10/296 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K F + + Y+ L+ GF + G + + + K G+ + V Y L+
Sbjct: 403 MVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAK--GLSLNTVGYNCLICALCKD 460
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA++ + E G+ K NS+++ LC N K +EAL L+ M E +
Sbjct: 461 GNIEEALQLFGEMSGKGC--KPDIYTFNSLINGLCKNHKMEEALSLYHDMFLE-----GV 513
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++N + + + + A ++ +M C D +++N LI LCK G + +
Sbjct: 514 IANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLG 573
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM KG+ P + +L+ +V+D + + M+ GL P++ YN L+ L
Sbjct: 574 LFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLC 633
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
++G + EA + F+ + + ++ D +Y ++ G ++ ++ +D G I
Sbjct: 634 KMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFI 689
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 132/318 (41%), Gaps = 18/318 (5%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
P VY++ +M + D L ++ + G V + V+Y +L+ E
Sbjct: 201 VSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKH--GCVPNSVIYQTLIHALCENNRVSE 258
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A++ + + N V+ LC G+ EA KL DRM + + +
Sbjct: 259 ALQLLEDMFLMCCEPDVQTF--NDVIHGLCRAGRIHEAAKLLDRML-----LRGFSTDAL 311
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE-LYGE 184
++ + G C G+ +A + K+ +P+T+ +N LI +G EA++ LY
Sbjct: 312 TYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNN 367
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G PD YT+ +++D + + +MV PN+ Y L+ + G
Sbjct: 368 MVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGR 427
Query: 245 LDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L+EA + M K L ++ Y ++ AL G ++E L++ G + G
Sbjct: 428 LEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNS 487
Query: 304 FVKGELSKEGREEEVVKL 321
+ G L K + EE + L
Sbjct: 488 LING-LCKNHKMEEALSL 504
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 20/239 (8%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
V+ ALC + D A L M P + + + C R +A+++
Sbjct: 211 VMKALCMVSEVDSACSLLRDMAKHGCVPNSVI-----YQTLIHALCENNRVSEALQLLED 265
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M C PD +FN++I LC+ G + EA +L M +G + D TYG LM + +
Sbjct: 266 MFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQ 325
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF--DIMVKKLKMDDASYK 267
VD+ R +++ PN +YN L+ V G +EAK ++++ + D ++
Sbjct: 326 VDEA----RALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFN 381
Query: 268 FMMKALSDGGKLDEILEIVGGIL----DDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
M+ L G L LE++ ++ + I ++ + F K+GR EE +++
Sbjct: 382 IMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGF-----CKQGRLEEAAEIV 435
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 12/239 (5%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
++D L G F KL +MK+E L F ++ Y G A +
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDE-----GLLFKESLFILIMKHYGKAGLPGQATRLLLD 159
Query: 150 M-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
M G Y C P S+N ++D L A ++ +M +GV+P YT+G++M A V+
Sbjct: 160 MWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVS 219
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYK 267
VD + R M G PN +Y L+ L + + EA D+ + + D ++
Sbjct: 220 EVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFN 279
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE--FVKGELSKEGREEEVVKLMEK 324
++ L G++ E +++ +L G FS + ++ L + G+ +E L+ K
Sbjct: 280 DVIHGLCRAGRIHEAAKLLDRMLLRG---FSTDALTYGYLMHGLCRMGQVDEARALLNK 335
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 130/251 (51%), Gaps = 11/251 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGFV D V Y L+ G +GD + LF E + K G+ D VVY SL+KG ++G+
Sbjct: 322 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK--GIKPDIVVYNSLVKGLCLQGLI 379
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKRLAV 122
A++ NE E + N V++ LC G +A + D + + P
Sbjct: 380 LHALQVMNEMAEEGCHPDIQTY--NIVINGLCKMGNISDATVVMNDAIMKGYLP------ 431
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ +FN + DGYC + + A+++ +M EY +PDT+++N++++ LCK G + E E +
Sbjct: 432 DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETF 491
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM KG +P+ TY +L++ N++++ + KM GL P+ +N L+ +
Sbjct: 492 QEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRN 551
Query: 243 GMLDEAKSFFD 253
G L+ A F
Sbjct: 552 GDLEGAYLLFQ 562
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 11/272 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y ++ G G + +LF+++ V + + ++ +G EA
Sbjct: 155 VAYCTVVCGLYAHGHTHDARQLFDQMLHT--HVFPNLAAFNKVLHALCKRGDVLEAGLLL 212
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + S+ + N + LC G+ EA++L D M+ P ++ ++N +
Sbjct: 213 GKVIQRGMSINL--FTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP------DVVTYNTL 264
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C + ++A+ R+M C PD ++N +ID CK M+ EA EL + KG
Sbjct: 265 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 324
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD+ TY L++ V+ F + G++P++ VYN LV L G++ A
Sbjct: 325 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 384
Query: 251 FFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ M ++ D +Y ++ L G + +
Sbjct: 385 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 416
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP-------------KR----------- 119
AVA +V+ L +G +A +LFD+M + H P KR
Sbjct: 154 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 213
Query: 120 ------LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
+++NL ++N+ G C GR +A+ + M Y PD +++N LI LCK
Sbjct: 214 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAY-AVPDVVTYNTLIRGLCKKS 272
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
M EA M ++G PD++TY ++D +++ V + + V G P+ Y
Sbjct: 273 MPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYC 332
Query: 234 RLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
L+ L G ++ A F+ K +K D Y ++K L G + L+++ + ++
Sbjct: 333 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 392
Query: 293 G 293
G
Sbjct: 393 G 393
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 37/275 (13%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--KRLAVNLGSFNVMAD-------- 132
+A A N+++DAL + D+A K++ RM P + L SF + A
Sbjct: 87 AAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLL 146
Query: 133 ---------GYC-------GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
YC G DA ++F +M P+ +FN ++ LCK G +
Sbjct: 147 RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVL 206
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR----PNLAVY 232
EA L G++ +G++ + +TY + + E R+ + ++VD G+R P++ Y
Sbjct: 207 EAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAV----RLVD-GMRAYAVPDVVTY 261
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILD 291
N L+ L + M EA + M+ + + DD +Y ++ + E E++ +
Sbjct: 262 NTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVF 321
Query: 292 DGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
G + + G L EG E ++L + +
Sbjct: 322 KGFVPDQVTYCSLING-LCAEGDVERALELFNEAQ 355
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 32/189 (16%)
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
Y GR +DA++ F +M + C P ++N ++D L +A ++Y M GV+P
Sbjct: 62 AYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSP 121
Query: 193 DEYTYGL-LMDACFEVN------------------------------RVDDGATYFRKMV 221
D +T+ + L C D F +M+
Sbjct: 122 DLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQML 181
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
+ + PNLA +N+++ L + G + EA ++++ + ++ +Y ++ L + G+L
Sbjct: 182 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLP 241
Query: 281 EILEIVGGI 289
E + +V G+
Sbjct: 242 EAVRLVDGM 250
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 44/261 (16%)
Query: 2 FVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
+KG++ D ++ L+ G+ + D +L E + E G+ D + Y S++ G G
Sbjct: 425 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY--GIAPDTITYNSVLNGLCKAG 482
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E E + E + + + + N +++ C + K +EA K+ +M E P +
Sbjct: 483 KVNEVNETFQEMILKGCHP--NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAV- 539
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGE--YRCSPDTL------------------- 160
SFN + G+C G + A +F+K+ E Y + DT
Sbjct: 540 ----SFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 595
Query: 161 --------------SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
++ LID CK + A EM KG P T+G ++++
Sbjct: 596 FDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTV 655
Query: 207 VNRVDDGATYFRKMVDSGLRP 227
+RV MV G+ P
Sbjct: 656 NHRVFQAVGIIHIMVKIGVVP 676
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 166/340 (48%), Gaps = 23/340 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V YS L+ GF G + LF ++ + + D + L+ G+ +
Sbjct: 222 MVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISE--EINPDVYTFSILVDGFCKE 279
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA A+ +K V S++D C + ++A +F+ M +
Sbjct: 280 GRVKEAKNVL--AMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQ-----GGV 332
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ S+N+M +G+C + +A+ +F++M PD +++N+LID LCK+G ++ A +
Sbjct: 333 TANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALK 392
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM D+GV D+ TY ++DA + ++VD KM D G++P++ Y L+ L
Sbjct: 393 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLC 452
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G L +A++ F D++VK + +Y M++ D D+ L ++ + D+G I
Sbjct: 453 KGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIP--- 509
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+ + E ++ L EK E + AE RE A
Sbjct: 510 ----------NAKTYEIIILSLFEKDENDMAEKLLREMIA 539
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 163/358 (45%), Gaps = 14/358 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G +D V ++ L+ F + G + F +F + +K G + + +L+KG +KG
Sbjct: 86 GIASDLVTFNILINCFSQLGHTHFSFSVFANILKK--GYEPNAITLTTLIKGLCLKGQIH 143
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ +++ V ++ V ++++ LC G+ AL+L R+ + P N+
Sbjct: 144 QALHFHDKVVA--LGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQP-----NV 196
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+N + D C +A +++ +M SPD ++++ LI C G L +A L+ +
Sbjct: 197 VMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNK 256
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + +NPD YT+ +L+D + RV + M+ G++P++ Y L+ V
Sbjct: 257 MISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQ 316
Query: 245 LDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+++AKS F+ M + + + SY M+ K+DE + + + I
Sbjct: 317 VNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNS 376
Query: 304 FVKGELSKEGREEEVVKLM-EKKEREKAEAKAREAEAAEAAKRSARA--AIASLIPSK 358
+ G L K G+ +KL+ E +R K +A ++ + AIA L K
Sbjct: 377 LIDG-LCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 433
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G A+ Y+ ++ GF + D LF+E+ K ++ D V Y SL+ G G
Sbjct: 331 GVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCK--NIIPDVVTYNSLIDGLCKSGKIS 388
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ +E + V + NS+LDALC N + D+A+ L +MK+E P ++
Sbjct: 389 YALKLVDEM--HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP-----DM 441
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ ++ DG C GR KDA +F + + ++ +I C N + +A L +
Sbjct: 442 YTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSK 501
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
M D G P+ TY +++ + FE + D R+M+ GL
Sbjct: 502 MEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 1/144 (0%)
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ F ++ +P F ++ L K A L+ EM G+ D T+ +L++
Sbjct: 41 VSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINC 100
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMD 262
++ + F ++ G PN L+ L G + +A F D ++ ++
Sbjct: 101 FSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLN 160
Query: 263 DASYKFMMKALSDGGKLDEILEIV 286
Y ++ L G+ L+++
Sbjct: 161 KVCYGTLINGLCKVGQTSAALQLL 184
>gi|255661000|gb|ACU25669.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 376
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 139/282 (49%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G G D V ++E +K+ V D + YG L+ G+ G +++
Sbjct: 62 FNIMMRGLFDXGKVDEVISIWELMKK--SDFVEDSITYGILVHGFCKNGXINKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC D+A+ + + M P N +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKP-----NAHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG CSP +++N LI+ LCKN M EA +L EM +KG+NP
Sbjct: 173 GLVGASKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
TY +LM ++V+ + +++ G +P++ ++N L+ L VG A S +
Sbjct: 233 SVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLY 292
Query: 253 DIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
M + K + ++ +M+ G + L I +L +G
Sbjct: 293 FXMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNG 334
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 136/308 (44%), Gaps = 12/308 (3%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+++E+ E V D VVY +++ GYF ++ E + E +G + +S
Sbjct: 4 GDIDGAERVYKEIVE--SKVSPDAVVYNTMLNGYFRVAKIKDCFELW-EMMGNEGNRSVS 60
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ N ++ L + GK DE + +++ MK + ++ ++ G+C G +
Sbjct: 61 SF--NIMMRGLFDXGKVDEVISIWELMKKSDFVEDSI-----TYGILVHGFCKNGXINKS 113
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ V + D +++ +I+ LCK L +A + +M G P+ + Y L++
Sbjct: 114 LHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLING 173
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
++ +D FR+M P + YN L+ L + M EA M++K L
Sbjct: 174 LVGASKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPS 233
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+Y +MK L K++ L++ ++ G + ++ + L G+ + + L
Sbjct: 234 VITYSMLMKGLCLDHKVERALQLWNQVISK-GFKPDVQMHNILIHGLCSVGKTQRALSLY 292
Query: 323 EKKEREKA 330
R K
Sbjct: 293 FXMNRWKC 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 129/288 (44%), Gaps = 44/288 (15%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
FV D + Y L+ GF ++G + + E + E+ GGV+ D Y +++ G + ++
Sbjct: 90 FVEDSITYGILVHGFCKNGXINKSLHVLE-MAEQKGGVL-DAFAYSAMINGLCKEANLDK 147
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A+ N+ + S K +A N++++ L KF++A+++F M H P +
Sbjct: 148 AVSVLNDMI--KSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVHCSPTII----- 200
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + +G C F +A ++ ++M E +P ++++ L+ LC + + A +L+ ++
Sbjct: 201 TYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQV 260
Query: 186 SDKGVNPDEYTYGLLMDA-C------------FEVNR----------------------V 210
KG PD + +L+ C F +NR +
Sbjct: 261 ISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFXMNRWKCAPNLVTHNTLMEGFYKDGDI 320
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+ + +++ +GL P++ YN + L + +A F V+K
Sbjct: 321 RNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDSVRK 368
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDG---VVYGSLMKGY 57
M G + VY+ L+ G V + R+F E+ G V + Y +L+ G
Sbjct: 155 MIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREM-----GTVHCSPTIITYNTLINGL 209
Query: 58 FMKGMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
M EA + E + G N SV + + ++ LC + K + AL+L++++ ++
Sbjct: 210 CKNEMFGEAYDLVKEMLEKGLNPSV----ITYSMLMKGLCLDHKVERALQLWNQVISKGF 265
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P ++ N++ G C G+ + A+ ++ M ++C+P+ ++ N L++ K+G +
Sbjct: 266 KP-----DVQMHNILIHGLCSVGKTQRALSLYFXMNRWKCAPNLVTHNTLMEGFYKDGDI 320
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
A ++ + G+ PD +Y + + NR+ D + V + P
Sbjct: 321 RNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDSVRKKIVPT 373
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ Y+ L+ G ++ + L +E+ EK G+ + Y LMKG + E A++ +
Sbjct: 200 ITYNTLINGLCKNEMFGEAYDLVKEMLEK--GLNPSVITYSMLMKGLCLDHKVERALQLW 257
Query: 71 NEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
N+ + G V+M +N ++ LC+ GK AL L+ M P NL + N
Sbjct: 258 NQVISKGFKPDVQM----HNILIHGLCSVGKTQRALSLYFXMNRWKCAP-----NLVTHN 308
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ +G+ G ++A+ ++ ++ PD +S+N + LC + +A + K
Sbjct: 309 TLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDSVRK 368
Query: 189 GVNPDEYT 196
+ P + T
Sbjct: 369 KIVPTKIT 376
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + AE +Y E+ + V+PD Y +++ F V ++ D + M + G R ++
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGYFRVAKIKDCFELWEMMGNEGNR-SV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIV-- 286
+ +N ++ L G +DE S +++M K ++D+ +Y ++ G +++ L ++
Sbjct: 60 SSFNIMMRGLFDXGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLEM 119
Query: 287 ----GGILD 291
GG+LD
Sbjct: 120 AEQKGGVLD 128
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M ++G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGYFRVAKIKDCFELWEMMGNEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M S + Y LV + G ++++ ++
Sbjct: 60 SSFNIMMRGLFDXGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L LD+ + ++ ++ G
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSG 159
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 135/258 (52%), Gaps = 13/258 (5%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
D V +S L+ F R G+ D E+K G+V DGV+Y ++ G+ G EA
Sbjct: 294 TPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGL--GLVPDGVIYTMVIGGFCRAGSMSEA 351
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ +E VG V N++L+ LC + +A KL + M+ P +L +
Sbjct: 352 LRVRDEMVG--FGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTP-----DLCT 404
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F + GYC QG F++A+++F + R PD +++N+LID +C+ G LA+A EL+ +M
Sbjct: 405 FTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMH 464
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ + P+ TY +L+D+ E +V+D + +MV G PN+ YN ++ + G +
Sbjct: 465 AREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVK 524
Query: 247 EAKSFFDIMVKKLKMDDA 264
+ + F ++K++ D+
Sbjct: 525 KGQQF----LQKMRQDNV 538
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 139/294 (47%), Gaps = 13/294 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGME 63
G V D V+Y+ ++ GF R G R+ +E+ +G G + D V Y +L+ G +
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM---VGFGCLPDVVTYNTLLNGLCKQHRL 383
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + NE E V +++ C G F+ AL+LFD + + RL +
Sbjct: 384 LDAEKLLNEM--EERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQ-----RLRPD 436
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + DG C +G A E++ M P+ ++++ LID C+ G + +A
Sbjct: 437 VVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLD 496
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KG P+ TY ++ V G + +KM + P+L +N L+ ++
Sbjct: 497 EMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEE 556
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+ A + F+IM K++ DA +Y ++ S+ G + + + G + D GIE
Sbjct: 557 NMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKG-MGDSGIE 609
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 11/256 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEEL-KEKLGGVVSDGVVYGSLMKGYFMKGM 62
+G D ++ L+ G+ R G+ + +LF+ L +++L D V Y SL+ G KG
Sbjct: 396 RGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLR---PDVVTYNSLIDGMCRKGD 452
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A E +++ + + + + ++D+ C G+ ++A D M + N P
Sbjct: 453 LAKANELWDDM--HAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLP----- 505
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ ++N + GYC G K + +KM + PD ++FN LI K + A ++
Sbjct: 506 NIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVF 565
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M + V PD TY ++++ E + D F+ M DSG+ P+ Y L+ V
Sbjct: 566 NIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTA 625
Query: 243 GMLDEAKSFFDIMVKK 258
G +A D M+ +
Sbjct: 626 GNSKQAFQLHDEMIHR 641
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 7/255 (2%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E V V +N ++DA G D A+ L D M N + L + ++N + G C
Sbjct: 184 EKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMAN-----RGLKPGIVTYNSVLKGLC 238
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
RF A EVFR M + +PD SFN LI C+ G + EA + Y EM + V PD
Sbjct: 239 KHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVV 298
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
++ L+ +D Y R+M GL P+ +Y ++G + G + EA D M
Sbjct: 299 SFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM 358
Query: 256 VKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
V + D +Y ++ L +L + +++ + + G + G ++G
Sbjct: 359 VGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHG-YCRQGN 417
Query: 315 EEEVVKLMEKKEREK 329
E ++L + R++
Sbjct: 418 FENALQLFDTLLRQR 432
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 50/313 (15%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V + + +V+SY + + DG + E++++ V D V + L+ F G
Sbjct: 155 VNAYTLNIMVHSY-----CKTLEFDGADTVISEMEKRC--VFPDVVTHNVLIDARFRAGD 207
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+ A+ + N +K V NSVL LC + +FD+A ++F M P
Sbjct: 208 VDAAIALVDSMA--NRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAP----- 260
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI---------DQ----- 168
++ SFN++ G+C G K+A++ +++M +PD +SF+ LI D
Sbjct: 261 DVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYL 320
Query: 169 ---------------------LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
C+ G ++EA + EM G PD TY L++ +
Sbjct: 321 REMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQ 380
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASY 266
+R+ D +M + G+ P+L + L+ + G + A FD +++ +L+ D +Y
Sbjct: 381 HRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTY 440
Query: 267 KFMMKALSDGGKL 279
++ + G L
Sbjct: 441 NSLIDGMCRKGDL 453
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 21/257 (8%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK---FDEALK 105
V+ L++ Y EA E + + + V + A A+N++L L G EA +
Sbjct: 89 VFDLLIRTYTQSRKPREAFEAFRLLL--DHRVPVPASASNALLAVLSRAGWPHLAQEAYR 146
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-PDTLSFNN 164
L +E VN + N+M YC F A V +M E RC PD ++ N
Sbjct: 147 LVLSSDSE--------VNAYTLNIMVHSYCKTLEFDGADTVISEM-EKRCVFPDVVTHNV 197
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
LID + G + A L M+++G+ P TY ++ + R D FR M
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCS 257
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE-- 281
+ P++ +N L+G +VG + EA F+ M + + D S+ ++ S G++D
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAG 317
Query: 282 --ILEIVG-GILDDGGI 295
+ E+ G G++ DG I
Sbjct: 318 AYLREMKGLGLVPDGVI 334
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 34/217 (15%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V Y+ L+ G R GD L++++ + ++ + + Y L+ + KG E+A
Sbjct: 435 PDVVTYNSLIDGMCRKGDLAKANELWDDMHAR--EILPNHITYSILIDSHCEKGQVEDAF 492
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL--- 124
+E V + + + NS++ C +G + + +M+ ++ P + N
Sbjct: 493 GFLDEMVKKGNLPNIRTY--NSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIH 550
Query: 125 ---------GSFNV------------------MADGYCGQGRFKDAIEVFRKMGEYRCSP 157
G+FNV + +G+ QG +DA VF+ MG+ P
Sbjct: 551 GYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEP 610
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
D ++ +LI+ G +A +L+ EM +G PD+
Sbjct: 611 DRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDD 647
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 156/329 (47%), Gaps = 13/329 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D V Y+ ++ G ++G D ++ E + ++ G + Y +LM+G G +
Sbjct: 431 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKR--GCTPSVITYTALMEGLCRTGRVD 488
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + E V ++ + A+A S+++ C + + EA K+ D ++ +
Sbjct: 489 EAHHIFKEMVSKDCTA--DALAYVSLVNGYCKSSRTKEAQKVVDGIRG--------TPYI 538
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+N + DGYC +GR + VF M C P+ ++N ++D LCK+G + EA
Sbjct: 539 DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLES 598
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G PD +Y +++D F+ ++ + +M+ +G+ P+ YN L+ + +
Sbjct: 599 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 658
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
D+A M+K + D+ +Y ++ LS +L + E++ +L +G + +
Sbjct: 659 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 718
Query: 304 FVKGELSKEGREEEVVKLMEKKEREKAEA 332
+ L KEG ++ + LM+ EA
Sbjct: 719 TIIDRLCKEGCLKQALLLMDHMTGHGVEA 747
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 148/346 (42%), Gaps = 39/346 (11%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y+ ++ G R D DG +E+ E+ V D Y L+ G ++A E
Sbjct: 225 DAIAYNAIIHGHCRKNDCDGALEFLKEMNER--KVAPDVFTYNILIDGLCKASKTDKASE 282
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN----- 123
+E V + V V NS++D LC GKF+ A L M + P N
Sbjct: 283 MLHEMV--DRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISG 340
Query: 124 -------------------------LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
+ +++++ADG C +GR +A E+ ++M C+P+
Sbjct: 341 LCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPN 400
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
+++N LID LCK +A EL + G PD TY +++D + R+D
Sbjct: 401 LVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVE 460
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGG 277
M+ G P++ Y L+ L + G +DEA F MV K DA +Y ++
Sbjct: 461 GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSS 520
Query: 278 KLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+ E ++V GI G + + + G KEGR +E+ + E
Sbjct: 521 RTKEAQKVVDGI---RGTPYIDVYNALMDG-YCKEGRLDEIPNVFE 562
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 154/361 (42%), Gaps = 22/361 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + Y+ LM G R G D +F+E+ K +D + Y SL+ GY
Sbjct: 462 MLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK--DCTADALAYVSLVNGYCKS 519
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA + + G N+++D C G+ DE +F+ M P
Sbjct: 520 SRTKEAQKVVDGIRGTPY-----IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVP--- 571
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N++ DG C G+ +A M C PD +S+N +ID L K EA +
Sbjct: 572 --NIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQ 629
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +M G+ PD TY LM + R DD + M+ +G+ P+ YN L+ L
Sbjct: 630 VLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLS 689
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA--SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
Q L +A M++ + A +Y ++ L G L + L ++ + G+E +
Sbjct: 690 QTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH-MTGHGVEAN 748
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAR-------EAEAAEAAKRSARAAI 351
L KEGR +E L+ + + + E +AE + A + AR +
Sbjct: 749 TVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMV 808
Query: 352 A 352
A
Sbjct: 809 A 809
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 133/288 (46%), Gaps = 13/288 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V Y+ LM F ++ D + + + + GV D V Y +L+ G
Sbjct: 634 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK--AGVDPDNVTYNTLISGLSQT 691
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A E +E + N V + N+++D LC G +AL L D M +
Sbjct: 692 NRLGDAYELMHEML-RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHG-----V 745
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++N+ D C +GR +A + +M R D +S+ +I LCK L A +
Sbjct: 746 EANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDRASK 802
Query: 181 LYGEM-SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L EM + KG+ +T+ LL+DA + R+D+ T MV G P++ YN ++ L
Sbjct: 803 LAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCL 862
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
++ +D+A FD M V+ + SY ++ L G+ E L+++
Sbjct: 863 CKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVL 910
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 137/321 (42%), Gaps = 15/321 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF + + + +G SD + +FE + + G D Y ++K
Sbjct: 119 RGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLD--AGYAPDSYTYHLVIKSLCQMNQI 176
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A ++A + K + A C G+ +AL++F N P A+
Sbjct: 177 DKAFTMLDKA--KVRGFKPEVSVYTILTRAFCKTGRLKDALEIF------RNIPSPDAI- 227
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + G+C + A+E ++M E + +PD ++N LID LCK +A E+
Sbjct: 228 --AYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLH 285
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM D+GV PD T+ +MD + + + + M + RP+ YN L+ L +
Sbjct: 286 EMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQ 345
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+D AK D V D +Y + L G++DE E+V + G
Sbjct: 346 NVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYN 405
Query: 303 EFVKGELSKEGREEEVVKLME 323
+ G L K + E+ +L+E
Sbjct: 406 TLIDG-LCKASKTEKAYELLE 425
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 139 RFKD---AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
R KD AI F G+ T + N + L +NG ++ M D G PD Y
Sbjct: 102 RLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSY 161
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
TY L++ + ++N++D T K G +P ++VY L + G L +A F
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF 218
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y+ +++G + D +L E+ G ++ + L+ + +EA+
Sbjct: 780 DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHT-FNLLIDAFTKTKRLDEALT 838
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
V S S + N V+ LC K D+A +LFD M + + + S+
Sbjct: 839 LLGLMVQRGCSP--SVITYNMVITCLCKLDKVDKAWELFDEMAV-----RGIVASSVSYT 891
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
V+ G CGQGR K+A++V +M C D L + ++
Sbjct: 892 VLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDV 928
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 5/145 (3%)
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
D+G +T + E D F +M+D+G P+ Y+ ++ L Q+ +D
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQID 177
Query: 247 EAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
+A + D V+ K + + Y + +A G+L + LEI I I ++ +
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYN----AII 233
Query: 306 KGELSKEGREEEVVKLMEKKEREKA 330
G K + + L E ER+ A
Sbjct: 234 HGHCRKNDCDGALEFLKEMNERKVA 258
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 156/333 (46%), Gaps = 11/333 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF G V ++ L+ G +LF+E+ + G D + Y +++ G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKM--GHEPDVITYSTIINGLCKM 58
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A++ + E K + VA N+++D+LC + EA+ F M E PP
Sbjct: 59 GNTTMALQLLKKM--EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPP--- 113
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + G+C GR +A +F++M E P+ ++F LID LCK M++EA
Sbjct: 114 --DVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWL 171
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M++KG+ PD YTY L+D +++D+ F M G PN+ YN L+
Sbjct: 172 VFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHC 231
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G +DEAK M K L D +Y +M+ G+ E E++ + G +
Sbjct: 232 KSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLI 291
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
+ G L K G +E +L++ + K E
Sbjct: 292 TYSIVLDG-LCKHGHLDEAFELLKAMQESKIEP 323
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 158/346 (45%), Gaps = 39/346 (11%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D + YS ++ G + G++ +L ++++EK G + V Y +++ +
Sbjct: 40 GHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEK--GCKPNVVAYNTIIDSLCKDRLVT 97
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EAM+ ++E V E + +S+L CN G+ +EA LF +M + P ++ +
Sbjct: 98 EAMDFFSEMVKE--GIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTI 155
Query: 125 ------------------------------GSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
++N + DGYC + + +A ++F M
Sbjct: 156 LIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKG 215
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C+P+ S+N LI+ CK+G + EA+ L EMS K + PD +TY LM +V R +
Sbjct: 216 CAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQ 275
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKAL 273
++M GL PNL Y+ ++ L + G LDEA M + K++ + Y +++ +
Sbjct: 276 ELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGM 335
Query: 274 SDGGKLDEILEIVGGILDDG----GIEFSEELQEFVKGELSKEGRE 315
GKL+ E+ + G + ++ + +KG LS E E
Sbjct: 336 CTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACE 381
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 133/314 (42%), Gaps = 39/314 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + + V ++ L+ G + + +FE + EK G+ D Y +L+ GY +
Sbjct: 141 MVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK--GLEPDVYTYNALVDGYCSR 198
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR- 119
+EA + +N + + + + N +++ C +G+ DEA L M ++ P
Sbjct: 199 SQMDEAQKLFN--IMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIF 256
Query: 120 -----------------------------LAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
L NL +++++ DG C G +A E+ + M
Sbjct: 257 TYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAM 316
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E + P+ + LI+ +C G L A EL+ + KG+ P TY +++ +
Sbjct: 317 QESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLS 376
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFM 269
++ FR+M +G PN YN ++ ++ G A + MV K D ++++
Sbjct: 377 NEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRM- 435
Query: 270 MKALSDGGKLDEIL 283
LSD DEI+
Sbjct: 436 ---LSDLESSDEII 446
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 143/296 (48%), Gaps = 11/296 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + D Y+ L+ GF + SD R+FE+L + G D V Y L+ G +
Sbjct: 80 MVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR--GFRPDVVTYSCLIDGLCKE 137
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA++ + + S + + V NS++ C GK DEA+ L +RM + P
Sbjct: 138 GRLKEAIDLFGRMIKSGSCMP-NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP--- 193
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + +G+C R DA ++ +M +P+ ++F +L+D LC+ L++A
Sbjct: 194 --DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVH 251
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ GEM K +P YTY ++D VN++++ + + +D PN+ +N ++ L
Sbjct: 252 ILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMDCP--PNVVSFNIMIRGLC 309
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+V EA + ++ D Y ++ L K+DE + +L++ G
Sbjct: 310 KVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGC 365
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 131/282 (46%), Gaps = 13/282 (4%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
V V Y+ L+ G + + + L EE+ G + D Y +L+ G+ ++A
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMV--YSGCIPDIFTYTTLITGFCKSKKSDDA 108
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ + + V + V + ++D LC G+ EA+ LF RM + N +
Sbjct: 109 LRVFEQLVARG--FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS----CMPNTVT 162
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + G+C G+ +A+ + +M E SPD +++ L++ CK L +A +L +M+
Sbjct: 163 YNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMT 222
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
KG+ P+ T+ LMD NR+ D +M P + YN ++ +V L+
Sbjct: 223 RKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLE 282
Query: 247 EAKSFFDIMVKKLKMDD--ASYKFMMKALSDGGKLDEILEIV 286
EA+ F M++++ S+ M++ L + E +E+V
Sbjct: 283 EARKF---MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELV 321
>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 373
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 10/284 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ +M G +GD D ++E + + G V D YG L+ G+ G +++
Sbjct: 60 VSFNIMMRGLFGNGDVDKAISIWELMTQS--GFVEDSTTYGILVDGFCKNGYINKSLRVL 117
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ E + A A +++++ LC K DEA+ + + M P N +N +
Sbjct: 118 --GIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTP-----NAHVYNTL 170
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ G +F DAI VFR+MG CSP +++N LI+ LCK AEA +L EM +KG
Sbjct: 171 INGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGW 230
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-K 249
P TY LLM + ++V+ + +++ +GL+P++ + N L+ L VG A
Sbjct: 231 KPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALM 290
Query: 250 SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+FD+ + ++ +M+ G + L I IL +G
Sbjct: 291 LYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNG 334
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 128/271 (47%), Gaps = 11/271 (4%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+++E+ E V D VVY +++ G+F G ++ +E + E +G S +
Sbjct: 4 GDIDGAERVYKEMAES--KVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREDS--QN 58
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V+ N ++ L NG D+A+ +++ M + ++ ++ DG+C G +
Sbjct: 59 VVSFNIMMRGLFGNGDVDKAISIWELMTQSG-----FVEDSTTYGILVDGFCKNGYINKS 113
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ V E D +++ +I+ LCK L EA + M G P+ + Y L++
Sbjct: 114 LRVLGIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLING 173
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
V++ DD FR+M + P + YN L+ L + EA M++K K
Sbjct: 174 FVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPC 233
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y +MK L G K++ L++ ++ +G
Sbjct: 234 VITYSLLMKGLCQGHKVEMALQLWNQVISNG 264
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 130/295 (44%), Gaps = 45/295 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GFV D Y L+ GF ++G + R+ +EK GGV+ D Y +++ G +
Sbjct: 85 MTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEEK-GGVL-DAFAYSAMINGLCKE 142
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA+ N + + +A N++++ KFD+A+++F M + + P +
Sbjct: 143 AKLDEAVSVLNGMIKNGGTP--NAHVYNTLINGFVGVSKFDDAIRVFREMGSTNCSPTVV 200
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + +G C RF +A ++ ++M E P ++++ L+ LC+ + A +
Sbjct: 201 -----TYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQ 255
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA-C------------FEVNR------------------ 209
L+ ++ G+ PD +L+ C F++NR
Sbjct: 256 LWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFY 315
Query: 210 ----VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKL 259
+ + + +++ +GL+P++ YN + L + A F D + KK+
Sbjct: 316 KDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKI 370
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 98/228 (42%), Gaps = 9/228 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VY+ L+ GFV D R+F E+ V Y +L+ G
Sbjct: 155 MIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMGST--NCSPTVVTYNTLINGLCKG 212
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA + E + K + + ++ LC K + AL+L++++ + P
Sbjct: 213 ERFAEAYDLVKEML--EKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKP--- 267
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ N++ G C G+ + A+ ++ M + C+P+ ++ N L++ K+G + A
Sbjct: 268 --DVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALG 325
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
++ + G+ PD +Y + + +R+ + + + + P+
Sbjct: 326 IWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPS 373
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V+++M E + SPD + +N +++ + G + + EL+ E+ + + +
Sbjct: 1 CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREDSQNV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F VD + + M SG + Y LV + G ++++ I
Sbjct: 60 VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGI 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+K + DA +Y M+ L KLDE + ++ G++ +GG + + G
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLING 173
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM--VDSGLRP 227
C++G + AE +Y EM++ V+PD Y +++ F R+ D + M DS
Sbjct: 1 CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREDS---Q 57
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIV 286
N+ +N ++ L G +D+A S +++M + ++D+ +Y ++ G +++ L ++
Sbjct: 58 NVVSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVL 117
Query: 287 GGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
G + GG+ + + G L KE + +E V ++
Sbjct: 118 GIAEEKGGVLDAFAYSAMING-LCKEAKLDEAVSVL 152
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 164/359 (45%), Gaps = 48/359 (13%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V+YS ++ +D + + F L+ E+ + + S+ V Y +L+ G+ + G ++A+
Sbjct: 209 DVVMYSTIIDSMCKDKNVNDAFDLYSEMVSR--RISSNIVTYSALISGFCIVGKLKDAIG 266
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN----- 123
+N+ EN + N ++DA C G+ EA M + P + N
Sbjct: 267 LFNKMTSEN--INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDG 324
Query: 124 -------------------------LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
+ S+N++ +G+C A+++F++M + P+
Sbjct: 325 YCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPN 384
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
+++N+LID LCK+G ++ A EL M D+G PD TY ++DA + + VD
Sbjct: 385 VITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLI 444
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGG 277
K+ D G+RPN+ Y L+ L + G L++A++ F D++VK + +Y M++ G
Sbjct: 445 KLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHG 504
Query: 278 KLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKARE 336
DE L ++ + D+ I E + L +K E +KAE RE
Sbjct: 505 LFDEALSLLSKMKDNSCIP-------------DAITYEIIICSLFDKDENDKAEKLLRE 550
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 145/310 (46%), Gaps = 14/310 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D + + + GF G ++L G D V YG+L+ G G
Sbjct: 135 GYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVAL--GFHLDQVSYGTLINGLCKVGETR 192
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+E G+ V++ V ++++D++C + ++A L+ M + +R++ N+
Sbjct: 193 AALELLRRVDGK--LVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVS-----RRISSNI 245
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + G+C G+ KDAI +F KM +PD +FN L+D CK G + EA+
Sbjct: 246 VTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAM 305
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +G+ PD TY LMD VN V+ + M G+ + YN ++ ++ M
Sbjct: 306 MMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKM 365
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG----IEFSE 299
+D+A F ++ K++ + +Y ++ L G++ LE++ + D G I +S
Sbjct: 366 VDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSS 425
Query: 300 ELQEFVKGEL 309
L K L
Sbjct: 426 ILDALCKNHL 435
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 13/224 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G A Y+ ++ GF + D +LF+E+ K + + + Y SL+ G G
Sbjct: 344 RGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHK--QIFPNVITYNSLIDGLCKSGRI 401
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A+E + + + + + +S+LDALC N D+A+ L ++K++ P N
Sbjct: 402 SYALELID--LMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRP-----N 454
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+ ++ ++ DG C GR +DA +F + Y + +T + +I C +G+ EA L
Sbjct: 455 MYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNT--YTVMIQGFCSHGLFDEALSL 512
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+M D PD TY +++ + F+ + D R+M+ GL
Sbjct: 513 LSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL 556
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 107/239 (44%), Gaps = 9/239 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ LM G+ + + + + + GV + Y ++ G+
Sbjct: 306 MMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHR--GVTATVRSYNIVINGFCKI 363
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M ++AM+ + E + + + + NS++D LC +G+ AL+L D M + P
Sbjct: 364 KMVDQAMKLFKEM--HHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQP--- 418
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + D C AI + K+ + P+ ++ LID LCK G L +A
Sbjct: 419 --DIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARN 476
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
++ ++ KG N TY +++ D+ + KM D+ P+ Y ++ L
Sbjct: 477 IFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSL 535
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 91/228 (39%), Gaps = 41/228 (17%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+L +L + + L LF +M+ P N +FN++ + +C G A V K
Sbjct: 76 ILGSLVKSKHYHTVLSLFQKMEYRGIKP-----NFVNFNILINCFCQLGLIPFAFSVLAK 130
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD------- 202
+ + PDT++ N I C G + +A + ++ G + D+ +YG L++
Sbjct: 131 ILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGE 190
Query: 203 --ACFEVNR--------------------------VDDGATYFRKMVDSGLRPNLAVYNR 234
A E+ R V+D + +MV + N+ Y+
Sbjct: 191 TRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSA 250
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
L+ VG L +A F+ M + + D ++ ++ A G++ E
Sbjct: 251 LISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKE 298
>gi|255660994|gb|ACU25666.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 376
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 139/282 (49%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +K+ G V D +G L+ G+ G +++
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKKS--GFVEDSXTFGILVHGFCKNGYINKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC FD+A+ + + M P N +N + +
Sbjct: 120 A--EQKGGVLDAFAYSAMINGLCKEANFDKAVSVLNGMIKSGCKP-----NAHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G +F+DAI VFR+MG CSP +++N LI+ LCK M EA L E+ DKG+NP
Sbjct: 173 GLVAASKFEDAIIVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVRMHNILIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 133/281 (47%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + L+ GF ++G + + E+ E+ GGV+ D Y +++ G + +
Sbjct: 89 GFVEDSXTFGILVHGFCKNGYINKSLHVL-EMAEQKGGVL-DAFAYSAMINGLCKEANFD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ N + S K +A N++++ L KF++A+ +F M H P +
Sbjct: 147 KAVSVLNGMI--KSGCKPNAHVYNTLINGLVAASKFEDAIIVFREMGTMHCSPTII---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C + F +A + +++ + +P ++++ L+ LC + + A +L+ +
Sbjct: 201 -TYNTLINGLCKKEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + + M PNL +N L+ + G
Sbjct: 260 VTSKGFKPDVRMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY +K L ++ D IL
Sbjct: 320 IRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAIL 360
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VY+ L+ G V + +F E+ + Y +L+ G K
Sbjct: 155 MIKSGCKPNAHVYNTLINGLVAASKFEDAIIVFREMGTM--HCSPTIITYNTLINGLCKK 212
Query: 61 GMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
M EA E + G N V + + ++ LC + K + AL+L++++ ++ P
Sbjct: 213 EMFGEAYNLVKELLDKGLNPGV----ITYSMLMKGLCLDHKVERALQLWNQVTSKGFKP- 267
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ N++ G C G+ + A+ ++ M ++C+P+ +S N L++ K+G + A
Sbjct: 268 ----DVRMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNA 323
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
++ + G+ PD +Y + + NR+ D + V
Sbjct: 324 LVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAV 366
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 106/272 (38%), Gaps = 48/272 (17%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+++E+ E + D VVY +++ GYF
Sbjct: 4 GDIDGAERVYKEIVES--KMSPDAVVYNAMLNGYF------------------------- 36
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
K + +L++ M +E N ++ SFN+M G G+ +
Sbjct: 37 ------------RVAKIKDCFELWEMMGSEGNR------SVSSFNIMMRGLFDNGKVDEV 78
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
I ++ M + D+ +F L+ CKNG + ++ + KG D + Y +++
Sbjct: 79 ISIWELMKKSGFVEDSXTFGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMING 138
Query: 204 -CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKM 261
C E N D + M+ SG +PN VYN L+ LV ++A F M
Sbjct: 139 LCKEAN-FDKAVSVLNGMIKSGCKPNAHVYNTLINGLVAASKFEDAIIVFREMGTMHCSP 197
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y ++ L E +V +LD G
Sbjct: 198 TIITYNTLINGLCKKEMFGEAYNLVKELLDKG 229
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +V + + +++M + +S+ M
Sbjct: 6 IDGAERVYKEIVESKMSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I + G +E S V G K G + + ++E E++
Sbjct: 66 MRGLFDNGKVDEVISIWELMKKSGFVEDSXTFGILVHG-FCKNGYINKSLHVLEMAEQK 123
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVESKMSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M SG + + LV + G ++++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSXTFGILVHGFCKNGYINKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
+K + DA +Y M+ L D+ + ++ G++ G + + G ++
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANFDKAVSVLNGMIKSGCKPNAHVYNTLINGLVAASK 179
Query: 314 REEEVVKLME 323
E+ ++ E
Sbjct: 180 FEDAIIVFRE 189
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 10/290 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D VY+ ++ GF GD R F+E++ K G+ +DGV Y +L+ G
Sbjct: 355 MVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRK--GLATDGVTYTTLINGLCRA 412
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA + E + V V ++D C GK EA ++ + M + +
Sbjct: 413 GELKEAEKVLQEMLARRLDV--DEVTYTVLVDGYCKRGKMAEAFQVHNTMVQ-----RGV 465
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A N+ ++ ++DG C QG + A E+ +M + ++N+LI+ LCK G L +A
Sbjct: 466 APNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMR 525
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+M G+ PD YTY L+DA + +D ++M+D+G++P + YN L+
Sbjct: 526 TMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFC 585
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
G ++ K + M++K + + +Y +MK G + EI G+
Sbjct: 586 MSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGM 635
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 138/315 (43%), Gaps = 44/315 (13%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ L+ G + +LF+E+ D V YG L+ GY G E A++ ++
Sbjct: 265 YNILLKVLCGAGRVEDARQLFDEMASP-----PDVVTYGILIHGYCALGELENAVKLLDD 319
Query: 73 AVGE----NSSVKMSAVA-----------------------------NNSVLDALCNNGK 99
V N++V S VA +VL CN G
Sbjct: 320 MVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGD 379
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
A + FD M+ K LA + ++ + +G C G K+A +V ++M R D
Sbjct: 380 LVSARRWFDEMQR-----KGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDE 434
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
+++ L+D CK G +AEA +++ M +GV P+ TY L D + V +
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHE 494
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGK 278
M + GL N YN L+ L + G LD+A ++ D+ LK D +Y ++ AL G+
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554
Query: 279 LDEILEIVGGILDDG 293
LD +++ +LD+G
Sbjct: 555 LDRAHDLLQEMLDNG 569
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ L G + GD L E+ K G+ + Y SL+ G
Sbjct: 460 MVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK--GLELNACTYNSLINGLCKA 517
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++AM A + + +K +++DALC +G+ D A L M + P
Sbjct: 518 GYLDQAMR--TMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKP--- 572
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++NV+ +G+C GR + ++ M E P+ ++N+L+ Q C + E
Sbjct: 573 --TIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTE 630
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+Y M + V P+E TY +L+ + + + + +M++ G R + Y+ L+ L
Sbjct: 631 IYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLN 690
Query: 241 QVGMLDEAKSFFDIMVKK 258
+ EA+ F M K+
Sbjct: 691 KKKKFVEARKLFHDMRKE 708
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 144/317 (45%), Gaps = 11/317 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V YS ++ +D + E+ E+ G+ + Y S++ G+ G EA +
Sbjct: 234 VTYSTIIDSLCKDRLVNDAMEFLSEMVER--GIPPNVFTYNSIVHGFCNLGQLNEATRLF 291
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E VG + V + V ++D LC G EA +F+ M + P ++ ++N +
Sbjct: 292 KEMVGRD--VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEP-----DISTYNAL 344
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DGYC Q +A +VF M C+P S+N LI+ CK+ + EA+ L EM K +
Sbjct: 345 MDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKAL 404
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
NPD TY LM ++ R + F++M G PNL Y L+ + G LDEA
Sbjct: 405 NPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALK 464
Query: 251 FFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
M KKL+ + Y +++ + GKL+ E+ + DG +KG L
Sbjct: 465 LLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKG-L 523
Query: 310 SKEGREEEVVKLMEKKE 326
KEG +E L K E
Sbjct: 524 LKEGLSDEAYDLFRKME 540
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 115/202 (56%), Gaps = 12/202 (5%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
A+ N++++ LCN GK EA++LF+ M K H P N+ S+ + +G C G
Sbjct: 163 AITFNALINGLCNEGKIKEAVELFNEMVKRGHEP------NVISYTTVINGLCKTGNTSM 216
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A++VF+KM + C P+ ++++ +ID LCK+ ++ +A E EM ++G+ P+ +TY ++
Sbjct: 217 AVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVH 276
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+ ++++ F++MV + PN + LV L + GM+ EA+ F+ M +K ++
Sbjct: 277 GFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEP 336
Query: 262 DDASYKFMMKALSDGGKLDEIL 283
D ++Y AL DG L ++
Sbjct: 337 DISTY----NALMDGYCLQRLM 354
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 138/287 (48%), Gaps = 17/287 (5%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ D + + +L+ G +G +EA+E +NE V + + ++ +V++ LC G
Sbjct: 158 GIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH--EPNVISYTTVINGLCKTGNTS 215
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
A+ +F +M+ P N+ +++ + D C DA+E +M E P+ +
Sbjct: 216 MAVDVFKKMEQNGCKP-----NVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFT 270
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+N+++ C G L EA L+ EM + V P+ T+ +L+D + V + F M
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMT 330
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLD 280
+ G+ P+++ YN L+ +++EAK F+IM++K A SY ++ ++D
Sbjct: 331 EKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMD 390
Query: 281 E----ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
E + E+ L+ + +S +Q L + GR +E + L +
Sbjct: 391 EAKSLLAEMYHKALNPDTVTYSTLMQ-----GLCQLGRPKEALNLFK 432
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D Y+ LM G+ + ++FE + K G Y L+ GY
Sbjct: 332 KGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRK--GCAPGAHSYNILINGYCKSRRM 389
Query: 64 EEA----MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+EA E Y++A+ ++ V ++++ LC G+ EAL LF M + P
Sbjct: 390 DEAKSLLAEMYHKALNPDT------VTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHP-- 441
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
NL ++ ++ DG+C G +A+++ + M E + P+ + + LI+ + G L A+
Sbjct: 442 ---NLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAK 498
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ ++ G PD TY +++ + D+ FRKM D G PN YN ++
Sbjct: 499 ELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 558
Query: 240 VQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
+Q A D MV K+ ++ ++++ ++
Sbjct: 559 LQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
R+ N+ S N++ + C ++ V KM + PD ++FN LI+ LC G + EA
Sbjct: 123 RVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEA 182
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EL+ EM +G P+ +Y +++ + F+KM +G +PN+ Y+ ++
Sbjct: 183 VELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDS 242
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
L + ++++A F MV++ + + +Y ++ + G+L+E
Sbjct: 243 LCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNE 286
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
V+NNS NN D+AL F RM + P+ V G F + + ++ +
Sbjct: 65 VSNNS------NNVCVDDALASFYRMVRIN--PRPSVVEFGKF---LGSFAKKKQYSTVV 113
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
+ +M +R + + S N LI+ LC+ + + + G+M G++PD T+ L++
Sbjct: 114 SLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGL 173
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
++ + F +MV G PN+ Y ++ L + G A F M + K +
Sbjct: 174 CNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNV 233
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y ++ +L +++ +E + +++ G
Sbjct: 234 VTYSTIIDSLCKDRLVNDAMEFLSEMVERG 263
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 142/295 (48%), Gaps = 11/295 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + D Y+ L+ GF + SD R+FE+L + G D V Y L+ G +
Sbjct: 141 MVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR--GFRPDVVTYSCLIDGLCKE 198
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA++ + + S + + V NS++ C GK DEA+ L +RM + P
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMP-NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP--- 254
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + +G+C R DA ++ +M +PD ++F +L+D LC+ L++A
Sbjct: 255 --DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVH 312
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ GEM K +P YTY ++D N++++ + + +D PN+ +N ++ L
Sbjct: 313 ILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP--PNVVSFNIMIRGLC 370
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+V EA + ++ D Y ++ L K+DE + +L++ G
Sbjct: 371 KVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG 425
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 15/286 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K V V Y+ L+ G + + + L EE+ G + D Y +L+ G+
Sbjct: 109 KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMV--YSGCIPDIFTYTTLITGFCKSKKS 166
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAV 122
++A+ + + V + V + ++D LC G+ EA+ LF RM K+ P
Sbjct: 167 DDALRVFEQLVAR--GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP----- 219
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N ++N + G+C G+ +A+ + +M E SPD +++ L++ CK L +A +L
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 279
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M+ KG+ PD T+ LMD NR+ D +M P + YN ++ +
Sbjct: 280 NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRA 339
Query: 243 GMLDEAKSFFDIMVKKLKMDD--ASYKFMMKALSDGGKLDEILEIV 286
L+EA+ F M++++ S+ M++ L + E +E+V
Sbjct: 340 NQLEEARKF---MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELV 382
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 145/330 (43%), Gaps = 23/330 (6%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-----VYGSLMKGYFMKGM 62
AD V Y+ L+ G + V RL E+ LG +VS G Y +++ ++
Sbjct: 9 ADFVTYTSLIQGLCK------VKRL-EQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA + E N + + V ++D LC G+ DEA+ L +M+ + P AV
Sbjct: 62 LHEARKFLEEMANRN--LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT---AV 116
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++N + G C R +A ++ +M C PD ++ LI CK+ +A ++
Sbjct: 117 ---TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 173
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG-LRPNLAVYNRLVGKLVQ 241
++ +G PD TY L+D + R+ + F +M+ SG PN YN L+ +
Sbjct: 174 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 233
Query: 242 VGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+G +DEA + + M + D +Y +M +LD+ +++ + G
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKA 330
+ G L +E R + V ++ + R+
Sbjct: 294 FTSLMDG-LCRENRLSDAVHILGEMRRKSC 322
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
CS D +++ +LI LCK L +A G+M KG +PD YTY ++ A NR+ +
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALS 274
+ +M + L PN+ Y L+ L + G +DEA + M KK +Y ++ L
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLC 126
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ E +++ ++ G I + G K + ++ +++ E+
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITG-FCKSKKSDDALRVFEQ 175
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 142/295 (48%), Gaps = 11/295 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + D Y+ L+ GF + SD R+FE+L + G D V Y L+ G +
Sbjct: 141 MVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR--GFRPDVVTYSCLIDGLCKE 198
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA++ + + S + + V NS++ C GK DEA+ L +RM + P
Sbjct: 199 GRLKEAIDLFGRMIKSGSCMP-NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP--- 254
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + +G+C R DA ++ +M +PD ++F +L+D LC+ L++A
Sbjct: 255 --DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVH 312
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ GEM K +P YTY ++D N++++ + + +D PN+ +N ++ L
Sbjct: 313 ILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP--PNVVSFNIMIRGLC 370
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+V EA + ++ D Y ++ L K+DE + +L++ G
Sbjct: 371 KVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG 425
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 15/286 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K V V Y+ L+ G + + + L EE+ G + D Y +L+ G+
Sbjct: 109 KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMV--YSGCIPDIFTYTTLITGFCKSKKS 166
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAV 122
++A+ + + V + V + ++D LC G+ EA+ LF RM K+ P
Sbjct: 167 DDALRVFEQLVAR--GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP----- 219
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N ++N + G+C G+ +A+ + +M E SPD +++ L++ CK L +A +L
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 279
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M+ KG+ PD T+ LMD NR+ D +M P + YN ++ +
Sbjct: 280 NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRA 339
Query: 243 GMLDEAKSFFDIMVKKLKMDD--ASYKFMMKALSDGGKLDEILEIV 286
L+EA+ F M++++ S+ M++ L + E +E+V
Sbjct: 340 NQLEEARKF---MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELV 382
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 145/330 (43%), Gaps = 23/330 (6%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-----VYGSLMKGYFMKGM 62
AD V Y+ L+ G + V RL E+ LG +VS G Y +++ ++
Sbjct: 9 ADFVTYTSLIQGLCK------VKRL-EQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA + E N + + V ++D LC G+ DEA+ L +M+ + P AV
Sbjct: 62 LHEARKFLEEMANRN--LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT---AV 116
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++N + G C R +A ++ +M C PD ++ LI CK+ +A ++
Sbjct: 117 ---TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 173
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG-LRPNLAVYNRLVGKLVQ 241
++ +G PD TY L+D + R+ + F +M+ SG PN YN L+ +
Sbjct: 174 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 233
Query: 242 VGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+G +DEA + + M + D +Y +M +LD+ +++ + G
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKA 330
+ G L +E R + V ++ + R+
Sbjct: 294 FTSLMDG-LCRENRLSDAVHILGEMRRKSC 322
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
CS D +++ +LI LCK L +A G+M KG +PD YTY ++ A NR+ +
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALS 274
+ +M + L PN+ Y L+ L + G +DEA + M KK +Y ++ L
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLC 126
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ E +++ ++ G I + G K + ++ +++ E+
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITG-FCKSKKSDDALRVFEQ 175
>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 376
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 10/284 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ +M G +GD D ++E + + G V D YG L+ G+ G +++
Sbjct: 60 VSFNIMMRGLFGNGDVDKAISIWELMTQS--GFVEDSTTYGILVDGFCKNGYINKSLRVL 117
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ E + A A +++++ LC K DEA+ + + M P N +N +
Sbjct: 118 E--IAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTP-----NAHVYNTL 170
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ G +F DAI VFR+MG CSP +++N LI+ LCK AEA +L EM +KG
Sbjct: 171 INGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGW 230
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-K 249
P TY LLM + ++V+ + +++ +GL+P++ + N L+ L VG A
Sbjct: 231 KPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALM 290
Query: 250 SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+FD+ + ++ +M+ G + L I IL +G
Sbjct: 291 LYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNG 334
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 128/271 (47%), Gaps = 11/271 (4%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+++E+ E V D VVY +++ G+F G ++ +E + E +G S +
Sbjct: 4 GDIDGAERVYKEMAES--KVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREXS--QN 58
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V+ N ++ L NG D+A+ +++ M + ++ ++ DG+C G +
Sbjct: 59 VVSFNIMMRGLFGNGDVDKAISIWELMTQSG-----FVEDSTTYGILVDGFCKNGYINKS 113
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ V E D +++ +I+ LCK L EA + M G P+ + Y L++
Sbjct: 114 LRVLEIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLING 173
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
V++ DD FR+M + P + YN L+ L + EA M++K K
Sbjct: 174 FMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPC 233
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y +MK L G K++ L++ ++ +G
Sbjct: 234 VITYSLLMKGLCQGHKVEMALQLWNQVISNG 264
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 131/295 (44%), Gaps = 45/295 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GFV D Y L+ GF ++G + R+ E +EK GGV+ D Y +++ G +
Sbjct: 85 MTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEK-GGVL-DAFAYSAMINGLCKE 142
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA+ N + + +A N++++ KFD+A+++F M + + P +
Sbjct: 143 AKLDEAVSVLNGMIKNGGTP--NAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVV 200
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + +G C RF +A ++ ++M E P ++++ L+ LC+ + A +
Sbjct: 201 -----TYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQ 255
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA-C------------FEVNR------------------ 209
L+ ++ G+ PD +L+ C F++NR
Sbjct: 256 LWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFY 315
Query: 210 ----VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKL 259
+ + + +++ +GL+P++ YN + L + A F D + KK+
Sbjct: 316 KDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKI 370
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V+++M E + SPD + +N +++ + G + + EL+ E+ + + +
Sbjct: 1 CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREXSQNV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F VD + + M SG + Y LV + G ++++ +I
Sbjct: 60 VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEI 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+K + DA +Y M+ L KLDE + ++ G++ +GG + + G
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLING 173
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + AE +Y EM++ V+PD Y +++ F R+ D + +++ N+
Sbjct: 1 CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREXSQNV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGG 288
+N ++ L G +D+A S +++M + ++D+ +Y ++ G +++ L ++
Sbjct: 60 VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEI 119
Query: 289 ILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+ GG+ + + G L KE + +E V ++
Sbjct: 120 AEEKGGVLDAFAYSAMING-LCKEAKLDEAVSVL 152
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D +++M +S + P+ VYN ++ + G + + +++M ++ + S+ M
Sbjct: 6 IDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREXSQNVVSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
M+ L G +D+ + I + G +E S V G K G + ++++E E
Sbjct: 66 MRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDG-FCKNGYINKSLRVLEIAE 121
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 158/325 (48%), Gaps = 15/325 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ + + ++ L+ G G ++L G + + YG+L+ G G
Sbjct: 152 GYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVAL--GFQFNQISYGTLIDGLCKVGETR 209
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ G+ V+ + V ++++D +C + ++A L+ M + K ++ N+
Sbjct: 210 AALDLLRRVDGK--LVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVS-----KGISPNV 262
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + G+ G+ KDA+++F KM PD +FN L+D CK+G ++ A +L E
Sbjct: 263 VTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDE 322
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M D+G P+ TY ++DA + +RVD K+ D G+RPN+ Y L+ L G
Sbjct: 323 MHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGK 382
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L++A++ F D++VK + +Y M G DE ++ + ++G I + E
Sbjct: 383 LEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIP-DAKTYE 441
Query: 304 FVKGELSKEGREEEVVKLMEKKERE 328
+K L K+G + + EK RE
Sbjct: 442 LIKLSLFKKGEND----MAEKLHRE 462
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 130/317 (41%), Gaps = 52/317 (16%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
+ Y S + ++A+ +N + +N + A+ N +L +L + + L L
Sbjct: 53 IPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTP--PAIEFNKILGSLVKSKHYHTVLYLS 110
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
+M+ P NL + N++ + +C G A VF K+ + +P+T++F LI
Sbjct: 111 KKMEFRGIKP-----NLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIK 165
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV-------------------- 207
LC G + +A + ++ G ++ +YG L+D +V
Sbjct: 166 GLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQP 225
Query: 208 ---------------NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
V+D + +MV G+ PN+ Y+ L+ VG L +A F
Sbjct: 226 NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLF 285
Query: 253 DIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG----IEFSEELQEFVKG 307
+ M+ + +K D ++ ++ GK+ L++V + D G + +S L
Sbjct: 286 NKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD----- 340
Query: 308 ELSKEGREEEVVKLMEK 324
L K R ++ V L+ K
Sbjct: 341 ALCKTHRVDKAVALLTK 357
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 44/232 (18%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V YS L+ GF F
Sbjct: 253 MVSKGISPNVVTYSALISGF-------------------------------------FTV 275
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A++ +N+ + EN +K N ++D C +GK ALKL D M + PP
Sbjct: 276 GKLKDAVDLFNKMISEN--IKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPP--- 330
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +++ + D C R A+ + K+ + P+ ++ LID LC +G L +A
Sbjct: 331 --NIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARN 388
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
++ ++ KG + TY ++ + D+ + KM ++G P+ Y
Sbjct: 389 IFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTY 440
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 78/184 (42%), Gaps = 4/184 (2%)
Query: 107 FDRMKNEHN---PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFN 163
F +KN H P +NL ++ + + DA+ +F + +P + FN
Sbjct: 32 FQFLKNTHFNFIPCSSSKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFN 91
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
++ L K+ L +M +G+ P+ +L++ ++ + + F K++
Sbjct: 92 KILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKM 151
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEI 282
G PN + L+ L G + +A +F D +V + + SY ++ L G+
Sbjct: 152 GYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAA 211
Query: 283 LEIV 286
L+++
Sbjct: 212 LDLL 215
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 149/287 (51%), Gaps = 14/287 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ GF G + E++E+ GG+ + YG+++ G+ G +EA++ +
Sbjct: 520 VTYNTVIAGFCSRGRVQAALDIMREMRER-GGIAPNQYTYGTVISGWCKVGRVDEAVKVF 578
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+E + + VK AV N+++ C+ GK D AL DRM + +A+ + ++N++
Sbjct: 579 DEMLTKG-EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE-----RGVAMTVATYNLL 632
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
GR +A E+ +MG +PD ++N LI+ CK G + +A E++ MS +GV
Sbjct: 633 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 692
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
TY L+ A + +V + F + V G+RP+L +YN L+ G +D A
Sbjct: 693 RATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA-- 750
Query: 251 FFDIM----VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
F+IM K++ DD +Y +M+ L G++DE +++ + + G
Sbjct: 751 -FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 796
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 16/278 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G Y+ L+ DG + L EE+ K G+ D Y L+ G+ +
Sbjct: 617 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK--GLAPDVFTYNILINGHCKE 674
Query: 61 GMEEEAMECYNEAVGENSS---VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G ++A+E + EN S V+ + V +++ AL G+ E KLFD P
Sbjct: 675 GNVKKALEIF-----ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 729
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+L +N + + + G A E+ +M + R +PD +++N L+ LC G + E
Sbjct: 730 -----DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A +L EM+++G+ PD TY L+ V D +M++ G P L YN L+
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
L + G D+A++ MV+ + DD++Y +++ L+
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 882
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 10/246 (4%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
+ V Y +++ G+ +G + A++ E + E + + +V+ C G+ DEA+
Sbjct: 517 PNAVTYNTVIAGFCSRGRVQAALDIMRE-MRERGGIAPNQYTYGTVISGWCKVGRVDEAV 575
Query: 105 KLFDRM--KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
K+FD M K E P + +N + GYC QG+ A+ +M E + ++
Sbjct: 576 KVFDEMLTKGEVKPEAVM------YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 629
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
N L+ L +G EA EL EM KG+ PD +TY +L++ + V F M
Sbjct: 630 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 689
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
G+R + Y L+ L + G + E FD V++ ++ D Y ++ + S G +D
Sbjct: 690 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 749
Query: 282 ILEIVG 287
EI+G
Sbjct: 750 AFEIMG 755
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQG 138
S+ +S + + +L AL + F +F R+ RL + +FN+M C G
Sbjct: 452 SLPISTASLHPLLSALPSAPAFALFADMF-RL--------RLPLCTTTFNIMLRHLCSAG 502
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK-GVNPDEYTY 197
+ A+E+ R+M P+ +++N +I C G + A ++ EM ++ G+ P++YTY
Sbjct: 503 KPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 558
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSG-LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
G ++ +V RVD+ F +M+ G ++P +YN L+G G LD A + D MV
Sbjct: 559 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 618
Query: 257 KK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
++ + M A+Y ++ AL G+ E E+V
Sbjct: 619 ERGVAMTVATYNLLVHALFMDGRGTEAYELV 649
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 149/287 (51%), Gaps = 14/287 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ GF G + E++E+ GG+ + YG+++ G+ G +EA++ +
Sbjct: 515 VTYNTVIAGFCSRGRVQAALDIMREMRER-GGIAPNQYTYGTVISGWCKVGRVDEAVKVF 573
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+E + + VK AV N+++ C+ GK D AL DRM + +A+ + ++N++
Sbjct: 574 DEMLTKG-EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE-----RGVAMTVATYNLL 627
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
GR +A E+ +MG +PD ++N LI+ CK G + +A E++ MS +GV
Sbjct: 628 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 687
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
TY L+ A + +V + F + V G+RP+L +YN L+ G +D A
Sbjct: 688 RATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA-- 745
Query: 251 FFDIM----VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
F+IM K++ DD +Y +M+ L G++DE +++ + + G
Sbjct: 746 -FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 791
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 16/278 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G Y+ L+ DG + L EE+ K G+ D Y L+ G+ +
Sbjct: 612 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK--GLAPDVFTYNILINGHCKE 669
Query: 61 GMEEEAMECYNEAVGENSS---VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G ++A+E + EN S V+ + V +++ AL G+ E KLFD P
Sbjct: 670 GNVKKALEIF-----ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 724
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+L +N + + + G A E+ +M + R +PD +++N L+ LC G + E
Sbjct: 725 -----DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 779
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A +L EM+++G+ PD TY L+ V D +M++ G P L YN L+
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 839
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
L + G D+A++ MV+ + DD++Y +++ L+
Sbjct: 840 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 877
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 10/246 (4%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
+ V Y +++ G+ +G + A++ E + E + + +V+ C G+ DEA+
Sbjct: 512 PNAVTYNTVIAGFCSRGRVQAALDIMRE-MRERGGIAPNQYTYGTVISGWCKVGRVDEAV 570
Query: 105 KLFDRM--KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
K+FD M K E P + +N + GYC QG+ A+ +M E + ++
Sbjct: 571 KVFDEMLTKGEVKPEAVM------YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 624
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
N L+ L +G EA EL EM KG+ PD +TY +L++ + V F M
Sbjct: 625 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 684
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
G+R + Y L+ L + G + E FD V++ ++ D Y ++ + S G +D
Sbjct: 685 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 744
Query: 282 ILEIVG 287
EI+G
Sbjct: 745 AFEIMG 750
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQG 138
S+ +S + + +L AL + F +F R+ RL + +FN+M C G
Sbjct: 447 SLPISTASLHPLLSALPSAPAFALFADMF-RL--------RLPLCTTTFNIMLRHLCSAG 497
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK-GVNPDEYTY 197
+ A+E+ R+M P+ +++N +I C G + A ++ EM ++ G+ P++YTY
Sbjct: 498 KPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 553
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSG-LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
G ++ +V RVD+ F +M+ G ++P +YN L+G G LD A + D MV
Sbjct: 554 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 613
Query: 257 KK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
++ + M A+Y ++ AL G+ E E+V
Sbjct: 614 ERGVAMTVATYNLLVHALFMDGRGTEAYELV 644
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 135/279 (48%), Gaps = 10/279 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG+V D + Y+ ++ G R G + F+ + + G D V Y L+ + +
Sbjct: 175 MASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSR--GYSPDVVAYNGLLDALYKE 232
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EAM+ + + + + V NS+L L DEA ++F +M P
Sbjct: 233 GKTDEAMKLFKDVIAK--GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAP--- 287
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +++++ G+C + DA +V +M + PD +++N L+D LCK ++ +A E
Sbjct: 288 --NGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHE 345
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M D G PD +Y ++++ + N+V D F +M++ L P++ +N L+ L
Sbjct: 346 LFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLC 405
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGK 278
+ G LDEAK D M D +Y +M L G+
Sbjct: 406 KAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGR 444
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 158/324 (48%), Gaps = 11/324 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G A+ V Y+ L+ G +D + + ++L EE+ K G V D + Y +++ G
Sbjct: 140 MIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK--GYVPDNITYNTILSGLCRM 197
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + ++ S VA N +LDAL GK DEA+KLF + + P +
Sbjct: 198 GKVSEAKQFFDSMPSRGYSP--DVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTV 255
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + G + +A E+F+KM C+P+ +++ ++ C+ + +A +
Sbjct: 256 -----TYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHK 310
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EMS G PD TY +L+D + N VD F MVD+G P++ Y+ ++ L
Sbjct: 311 VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLC 370
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ + +A+ FD M+ +KL D ++ +M L GKLDE +++ + G
Sbjct: 371 KTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYV 430
Query: 300 ELQEFVKGELSKEGREEEVVKLME 323
+ G L K+GR + +L +
Sbjct: 431 AYNTLMNG-LRKQGRHIQADRLTQ 453
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 150/324 (46%), Gaps = 57/324 (17%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+ S+ G +RDG ++LFE++ + G+ DG+ Y L+ GY KG +EA Y
Sbjct: 14 VLKSFCKQGKLRDG-----YKLFEQMLD--NGISPDGIEYNILIDGYAKKGRVDEANRLY 66
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E V + ++ S NS+L+A C K EA++LF M + P ++ +++ +
Sbjct: 67 EEMV--SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEP-----DVVTYSTI 119
Query: 131 ADGYCGQGRFKDAIE-VFRKMGEYRCS--------------------------------- 156
G C G+ +A+E +F KM E CS
Sbjct: 120 ISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG 179
Query: 157 --PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
PD +++N ++ LC+ G ++EA++ + M +G +PD Y L+DA ++ + D+
Sbjct: 180 YVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAM 239
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM--- 270
F+ ++ G P+ YN ++ L + +DEA+ F MV + A+Y ++
Sbjct: 240 KLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGH 299
Query: 271 ---KALSDGGKLDEILEIVGGILD 291
K + D K+ E + +G + D
Sbjct: 300 CRAKKVDDAHKVLEEMSKIGAVPD 323
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G+ D V Y+ L+ ++G +D +LF+++ K G + D V Y S++ G K
Sbjct: 210 MPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAK--GYMPDTVTYNSILLGLARK 267
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA E + + V S + + VL C K D+A K+ + M P
Sbjct: 268 SNMDEAEEMFKKMVA--SGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVP--- 322
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N++ DG C A E+F M + C+PD +S++ +++ LCK + +A
Sbjct: 323 --DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARV 380
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M ++ + PD T+ +LMD + ++D+ +M SG P+ YN L+ L
Sbjct: 381 LFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLR 440
Query: 241 QVGMLDEAKSFFDIMVKK 258
+ G +A M +K
Sbjct: 441 KQGRHIQADRLTQAMKEK 458
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 113/238 (47%), Gaps = 12/238 (5%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
VL + C GK + KLF++M + P + +N++ DGY +GR +A ++ +
Sbjct: 14 VLKSFCKQGKLRDGYKLFEQMLDNGISPDGI-----EYNILIDGYAKKGRVDEANRLYEE 68
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M P ++N+L++ CK + EA EL+ M++KG PD TY ++ + +
Sbjct: 69 MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK 128
Query: 210 VDDGA-TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
V + F KM++ G N YN L+ L + ++ A + M K D+ +Y
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYN 188
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKGELSKEGREEEVVKLME 323
++ L GK+ E + + G +S ++ + + L KEG+ +E +KL +
Sbjct: 189 TILSGLCRMGKVSEAKQFFDSMPSRG---YSPDVVAYNGLLDALYKEGKTDEAMKLFK 243
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+ + N +F V+ +C QG+ +D ++F +M + SPD + +N LID K G + E
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A LY EM G+ P YTY L++A + ++ + F+ M + G P++ Y+ ++
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 238 KLVQVGMLDEA-KSFFDIMVKK 258
L + G + EA + F M+++
Sbjct: 122 GLCKTGKVTEALEMLFHKMIER 143
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
CSP+ +F ++ CK G L + +L+ +M D G++PD Y +L+D + RVD+
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
+ +MV GL P++ YN L+ + + EA F M +K + D +Y ++ L
Sbjct: 64 RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
GK+ E LE++ + + G + + L K+ E KL+E
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLE 173
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 149/287 (51%), Gaps = 14/287 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ GF G + E++E+ GG+ + YG+++ G+ G +EA++ +
Sbjct: 146 VTYNTVIAGFCSRGRVQAALDIMREMRER-GGIAPNQYTYGTVISGWCKVGRVDEAVKVF 204
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+E + + VK AV N+++ C+ GK D AL DRM + +A+ + ++N++
Sbjct: 205 DEMLTKG-EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE-----RGVAMTVATYNLL 258
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
GR +A E+ +MG +PD ++N LI+ CK G + +A E++ MS +GV
Sbjct: 259 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 318
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
TY L+ A + +V + F + V G+RP+L +YN L+ G +D A
Sbjct: 319 RATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA-- 376
Query: 251 FFDIM----VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
F+IM K++ DD +Y +M+ L G++DE +++ + + G
Sbjct: 377 -FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 422
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 16/278 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G Y+ L+ DG + L EE+ K G+ D Y L+ G+ +
Sbjct: 243 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK--GLAPDVFTYNILINGHCKE 300
Query: 61 GMEEEAMECYNEAVGENSS---VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G ++A+E + EN S V+ + V +++ AL G+ E KLFD P
Sbjct: 301 GNVKKALEIF-----ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 355
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+L +N + + + G A E+ +M + R +PD +++N L+ LC G + E
Sbjct: 356 -----DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 410
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A +L EM+++G+ PD TY L+ V D +M++ G P L YN L+
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 470
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
L + G D+A++ MV+ + DD++Y +++ L+
Sbjct: 471 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 508
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 10/246 (4%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
+ V Y +++ G+ +G + A++ E + E + + +V+ C G+ DEA+
Sbjct: 143 PNAVTYNTVIAGFCSRGRVQAALDIMRE-MRERGGIAPNQYTYGTVISGWCKVGRVDEAV 201
Query: 105 KLFDRM--KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
K+FD M K E P + +N + GYC QG+ A+ +M E + ++
Sbjct: 202 KVFDEMLTKGEVKPEAVM------YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 255
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
N L+ L +G EA EL EM KG+ PD +TY +L++ + V F M
Sbjct: 256 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 315
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
G+R + Y L+ L + G + E FD V++ ++ D Y ++ + S G +D
Sbjct: 316 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 375
Query: 282 ILEIVG 287
EI+G
Sbjct: 376 AFEIMG 381
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 7/171 (4%)
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
RL + +FN+M C G+ A+E+ R+M P+ +++N +I C G + A
Sbjct: 109 RLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAA 164
Query: 179 EELYGEMSDK-GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG-LRPNLAVYNRLV 236
++ EM ++ G+ P++YTYG ++ +V RVD+ F +M+ G ++P +YN L+
Sbjct: 165 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 224
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
G G LD A + D MV++ + M A+Y ++ AL G+ E E+V
Sbjct: 225 GGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 275
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 148/315 (46%), Gaps = 14/315 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y+ +M G+ G D R E V D +L++G +G A+
Sbjct: 127 DVMAYNAMMAGYCGAGQVDAARRWCAE-----RAVERDAYTCDTLIRGLCGRGRTANALA 181
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+E + + V +L+A C + +A+KL D M+++ P ++ ++N
Sbjct: 182 VLDEMLRRRCVPDV--VTYTILLEATCKRSGYKQAMKLLDEMRDKGCTP-----DIVTYN 234
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
V+ +G C +GR DAIE + + Y C P+T+S+N ++ LC +AEEL GEM K
Sbjct: 235 VVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK 294
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G P+ T+ +L+ V+ ++ G PN YN L+ + +D+A
Sbjct: 295 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKA 354
Query: 249 KSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+F D+MV + D SY ++ AL G++D +E++ + D G + G
Sbjct: 355 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 414
Query: 308 ELSKEGREEEVVKLM 322
L+K G+ +E ++L+
Sbjct: 415 -LTKAGKTKEALELL 428
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 10/251 (3%)
Query: 34 EELKEKLG--GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
EEL ++G G + V + L+ KG+ E A+E + S ++++ N +L
Sbjct: 285 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSP--NSLSYNPLL 342
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
A C K D+A+ D M + P ++ S+N + C G A+E+ ++
Sbjct: 343 HAFCKQKKMDKAMAFLDLMVSRGCYP-----DIVSYNTLLTALCRSGEVDVAVELLHQLK 397
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ C+P +S+N +ID L K G EA EL EM KG+ PD TY + +R++
Sbjct: 398 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 457
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM-DDASYKFMM 270
D F K+ D G+RPN +YN ++ L + A F M+ M ++++Y ++
Sbjct: 458 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 517
Query: 271 KALSDGGKLDE 281
+ L+ G + E
Sbjct: 518 EGLAYEGLIKE 528
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 9/189 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ R G+ D L +LK+K G + Y +++ G
Sbjct: 361 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK--GCAPVLISYNTVIDGLTKA 418
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+E NE V + ++ + +++ LC + ++A++ F ++++ P
Sbjct: 419 GKTKEALELLNEMVSKG--LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP--- 473
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +N + G C + AI++F M C P+ ++ LI+ L G++ EA +
Sbjct: 474 --NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 531
Query: 181 LYGEMSDKG 189
L E+ +G
Sbjct: 532 LLDELCSRG 540
>gi|255660980|gb|ACU25659.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 376
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G V ++E +K G V D + YG L+ G+ G ++++
Sbjct: 62 FNIMMRGLFDNGKVXEVIXIWELMKXS--GFVEDSITYGILVHGFCXNGYIDKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC B A+ + + M P N +N + +
Sbjct: 120 A--EQKGGVLXAFAYSAMINGLCKEANLBRAVSVLNGMIKSGCKP-----NAHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+M CSP +++N LI+ LCKN M A L E+ DKG+NP
Sbjct: 173 GLVGASKFEDAIRVFREMXTMHCSPTIITYNTLINGLCKNEMFGXAYNLVKELLDKGLNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 GVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + S+ +M+ G + L I IL +G
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VY+ L+ G V + R+F E+ + Y +L+ G
Sbjct: 155 MIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMXTM--HCSPTIITYNTLINGLCKN 212
Query: 61 GMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
M A E + G N V + + ++ LC + K ++AL+L++++ ++ P
Sbjct: 213 EMFGXAYNLVKELLDKGLNPGV----ITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKP- 267
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ N++ G C G+ + A+ ++ M ++C+P+ +S N L++ K+G + A
Sbjct: 268 ----DVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNA 323
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
++ + G+ PD +Y + + NR+ D + V
Sbjct: 324 LVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAV 366
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 11/226 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y E V S V AV N++L+ K + +L++ M +E N ++ SFN+
Sbjct: 13 YKEIV--ESKVSPDAVVYNAMLNGYFRXXKIKDCFELWEMMGSEGNR------SVSSFNI 64
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G G+ + I ++ M D++++ L+ C NG + ++ + KG
Sbjct: 65 MMRGLFDNGKVXEVIXIWELMKXSGFVEDSITYGILVHGFCXNGYIDKSLHVLEMAEQKG 124
Query: 190 VNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+ Y +++ C E N +B + M+ SG +PN VYN L+ LV ++A
Sbjct: 125 GVLXAFAYSAMINGLCKEAN-LBRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDA 183
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F ++ +Y ++ L +V +LD G
Sbjct: 184 IRVFREMXTMHCSPTIITYNTLINGLCKNEMFGXAYNLVKELLDKG 229
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 72/160 (45%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRXXKIKDCFELWEMMGSEG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +V + + M SG + Y LV G +D++ ++
Sbjct: 60 SSFNIMMRGLFDNGKVXEVIXIWELMKXSGFVEDSITYGILVHGFCXNGYIDKSLHVLEM 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + A +Y M+ L LB + ++ G++ G
Sbjct: 120 AEQKGGVLXAFAYSAMINGLCKEANLBRAVSVLNGMIKSG 159
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 74/167 (44%), Gaps = 3/167 (1%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + AE +Y E+ + V+PD Y +++ F ++ D + M G R ++
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRXXKIKDCFELWEMMGSEGNR-SV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGG 288
+ +N ++ L G + E +++M ++D+ +Y ++ G +D+ L ++
Sbjct: 60 SSFNIMMRGLFDNGKVXEVIXIWELMKXSGFVEDSITYGILVHGFCXNGYIDKSLHVLEM 119
Query: 289 ILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
GG+ + + G L KE + V ++ + + A
Sbjct: 120 AEQKGGVLXAFAYSAMING-LCKEANLBRAVSVLNGMIKSGCKPNAH 165
>gi|255661002|gb|ACU25670.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 376
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 140/282 (49%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G G D V ++E +K+ V D + +G L+ G+ G +++
Sbjct: 62 FNIMMRGLFDKGKVDEVISIWELMKK--SDFVEDSITFGILVHGFCKNGYINKSLHVLEM 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A Z + A A +++++ LC D+A+ + + M P N +N + +
Sbjct: 120 A--ZXKGGVLDAFAYSAMINGLCKEANLDKAVXVLNDMIKSGCKP-----NAHVYNTLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VFR+MG RCSP +++N LI+ LCKN M EA +L +M +KG+NP
Sbjct: 173 GLVGASKFEDAIRVFREMGXVRCSPTIITYNTLINGLCKNEMFGEAYDLVKDMLEKGLNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +LM ++V+ + +++ G +P++ ++N L+ L VG A S +
Sbjct: 233 SVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ K + ++ +M+ G + L I L +G
Sbjct: 293 FDMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARXLRNG 334
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
FV D + + L+ GF ++G + + E + Z GGV+ D Y +++ G + ++
Sbjct: 90 FVEDSITFGILVHGFCKNGYINKSLHVLE-MAZXKGGVL-DAFAYSAMINGLCKEANLDK 147
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A+ N+ + S K +A N++++ L KF++A+++F M P +
Sbjct: 148 AVXVLNDMI--KSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGXVRCSPTII----- 200
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + +G C F +A ++ + M E +P ++++ L+ LC + + A +L+ ++
Sbjct: 201 TYNTLINGLCKNEMFGEAYDLVKDMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQV 260
Query: 186 SDKGVNPDEYTYGLLMDA-C------------FEVNR----------------------V 210
KG PD + +L+ C F++NR +
Sbjct: 261 ISKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRWKCAPNLVTHNTLMEGFYKDGDI 320
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+ + + + +GL P++ YN + L + +A F V+K
Sbjct: 321 RNALVIWARXLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDAVRK 368
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 10/184 (5%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y E V S V AV +N++L+ K + +L++ M NE N ++ SFN+
Sbjct: 13 YKEIV--ESKVSPDAVVHNAMLNGYFRVAKIKDCFELWEMMGNEGNR------SVSSFNI 64
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G +G+ + I ++ M + D+++F L+ CKNG + ++ + KG
Sbjct: 65 MMRGLFDKGKVDEVISIWELMKKSDFVEDSITFGILVHGFCKNGYINKSLHVLEMAZXKG 124
Query: 190 VNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D + Y +++ C E N +D M+ SG +PN VYN L+ LV ++A
Sbjct: 125 GVLDAFAYSAMINGLCKEAN-LDKAVXVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDA 183
Query: 249 KSFF 252
F
Sbjct: 184 IRVF 187
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 17/232 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVV--YGSLMKGYF 58
M G + VY+ L+ G V + R+F E+ G V + Y +L+ G
Sbjct: 155 MIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREM----GXVRCSPTIITYNTLINGLC 210
Query: 59 MKGMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
M EA + + + G N SV + + ++ LC + K + AL+L++++ ++
Sbjct: 211 KNEMFGEAYDLVKDMLEKGLNPSV----ITYSMLMKGLCLDHKVERALQLWNQVISKGFK 266
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P ++ N++ G C G+ + A+ ++ M ++C+P+ ++ N L++ K+G +
Sbjct: 267 P-----DVQMHNILIHGLCSVGKTQLALSLYFDMNRWKCAPNLVTHNTLMEGFYKDGDIR 321
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
A ++ G+ PD +Y + + NR+ D + V + P
Sbjct: 322 NALVIWARXLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDAVRKKIVPT 373
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 13/188 (6%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ Y+ L+ G ++ + L +++ EK G+ + Y LMKG + E A++ +
Sbjct: 200 ITYNTLINGLCKNEMFGEAYDLVKDMLEK--GLNPSVITYSMLMKGLCLDHKVERALQLW 257
Query: 71 NEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
N+ + G V+M +N ++ LC+ GK AL L+ M P NL + N
Sbjct: 258 NQVISKGFKPDVQM----HNILIHGLCSVGKTQLALSLYFDMNRWKCAP-----NLVTHN 308
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ +G+ G ++A+ ++ + PD +S+N + LC + +A + K
Sbjct: 309 TLMEGFYKDGDIRNALVIWARXLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDAVRK 368
Query: 189 GVNPDEYT 196
+ P + T
Sbjct: 369 KIVPTKIT 376
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + E +Y E+ + V+PD + +++ F V ++ D + M + G R ++
Sbjct: 1 CESGDIDGPERVYKEIVESKVSPDAVVHNAMLNGYFRVAKIKDCFELWEMMGNEGNR-SV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIV-- 286
+ +N ++ L G +DE S +++M K ++D+ ++ ++ G +++ L ++
Sbjct: 60 SSFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITFGILVHGFCKNGYINKSLHVLEM 119
Query: 287 ----GGILD 291
GG+LD
Sbjct: 120 AZXKGGVLD 128
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 157/360 (43%), Gaps = 37/360 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V + V YS L+ G + G D L +E+ K V+ + + Y S + G +
Sbjct: 98 MSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ 157
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M EA E + V V ++++D LC G+ DEA +FD M P +
Sbjct: 158 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI 217
Query: 121 AVN------------------------------LGSFNVMADGYCGQGRFKDAIEVFRKM 150
N + +++V+ D +C R +A+E+ M
Sbjct: 218 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 277
Query: 151 GEYRCSPDTL-----SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
C+P+ L +FN LI CK G +A L+ EM K + PD T+G L+D
Sbjct: 278 ASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 337
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA- 264
+ +V+ M + G+ PN+ YN LV L + G ++EA F + MV + D+
Sbjct: 338 KAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSI 397
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+Y ++ AL + D+ L++V + G + V G L K G+ E+ + ++E+
Sbjct: 398 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG-LWKSGKTEQAITVLEE 456
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 160/332 (48%), Gaps = 22/332 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y+ L+ + GD + RL ++ + G V + V Y L+ G G
Sbjct: 66 RGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR--GCVPNVVTYSVLINGLCKVGRI 123
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA E E ++ V + + NS LD LC EA +L M++ + R++ +
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL---MRSLRDGSLRVSPD 180
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+F+ + DG C G+ +A VF M G Y P+ +++N L++ LCK + A +
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGY--VPNVITYNALVNGLCKADKMERAHAM 238
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV-----YNRLV 236
M DKGV PD TY +L+DA + +RVD+ M G PN+ V +N L+
Sbjct: 239 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILI 298
Query: 237 GKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLD---EILEIVGGILDD 292
+ G ++A + F+ MV K L+ D ++ ++ L G+++ +IL+++G +
Sbjct: 299 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL--- 355
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
G+ + + L K GR EE + +E+
Sbjct: 356 -GVPPNVVTYNALVHGLCKSGRIEEACQFLEE 386
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 132/297 (44%), Gaps = 11/297 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G+V + + Y+ L+ G + + + E + +K GV D + Y L+ +
Sbjct: 207 MIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK--GVTPDVITYSVLVDAFCKA 264
Query: 61 GMEEEAMECYNEAVGENSSVKM---SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
+EA+E + + + V N ++ C G F++A LF+ M
Sbjct: 265 SRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMV-----A 319
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
K L ++ +F + DG C G+ + A ++ MG P+ +++N L+ LCK+G + E
Sbjct: 320 KNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEE 379
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A + EM G PD TYG L+ A +R DD ++ G P+ YN LV
Sbjct: 380 ACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVD 439
Query: 238 KLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
L + G ++A + + MV K D+ ++ L G L +E++ +L G
Sbjct: 440 GLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKG 496
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 129/279 (46%), Gaps = 36/279 (12%)
Query: 50 YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR 109
Y +++ G A+E + + + V + V N++++ LC + ++LF+
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDG-VAPTIVTYNTIINGLCKSNDLGAGMELFEE 62
Query: 110 M-KNEHNP--------------------PKRL---------AVNLGSFNVMADGYCGQGR 139
+ + H+P +RL N+ +++V+ +G C GR
Sbjct: 63 LVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGR 122
Query: 140 FKDAIEVFRKMGEYRCS--PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG--VNPDEY 195
+A E+ ++M C P+ +++N+ +D LCK M AEA EL + D V+PD
Sbjct: 123 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 182
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
T+ L+D + ++D+ + F M+ G PN+ YN LV L + ++ A + + M
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 242
Query: 256 VKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
V K + D +Y ++ A ++DE LE++ G+ G
Sbjct: 243 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 281
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 114/244 (46%), Gaps = 14/244 (5%)
Query: 88 NSVLDALCNNGKFDEALKLFD-RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N VL +LC G AL++F M + P + ++N + +G C +E+
Sbjct: 5 NIVLQSLCRAGDTARALEIFRGEMARDGVAP-----TIVTYNTIINGLCKSNDLGAGMEL 59
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F ++ E PD +++N LID LCK G L EA L+G+MS +G P+ TY +L++ +
Sbjct: 60 FEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCK 119
Query: 207 VNRVDDGATYFRKMV--DSGLRPNLAVYNRLVGKLVQVGMLDEA----KSFFDIMVKKLK 260
V R+D+ ++M + PN+ YN + L + M EA +S D + ++
Sbjct: 120 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL-RVS 178
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
D ++ ++ L G++DE + ++ G + V G L K + E
Sbjct: 179 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNG-LCKADKMERAHA 237
Query: 321 LMEK 324
++E
Sbjct: 238 MIES 241
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 5/182 (2%)
Query: 127 FNVMADGYCGQGRFKDAIEVFR-KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+N++ C G A+E+FR +M +P +++N +I+ LCK+ L EL+ E+
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
++G +PD TY L+D+ + +++ M G PN+ Y+ L+ L +VG +
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123
Query: 246 DEAKSFFDIMVKK---LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
DEA+ M +K + + +Y + L E E++ L DG + S +
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS-LRDGSLRVSPDTV 182
Query: 303 EF 304
F
Sbjct: 183 TF 184
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 146/280 (52%), Gaps = 14/280 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ GF G + E++E+ GG+ + YG+++ G+ G +EA++ +
Sbjct: 73 VTYNTVIAGFCSRGRVQAALDIMREMRER-GGIAPNQYTYGTVISGWCKVGRVDEAVKVF 131
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+E + + VK AV N+++ C+ GK D AL DRM + +A+ + ++N++
Sbjct: 132 DEMLTK-GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE-----RGVAMTVATYNLL 185
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
GR +A E+ +MG +PD ++N LI+ CK G + +A E++ MS +GV
Sbjct: 186 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 245
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
TY L+ A + +V + F + V G+RP+L +YN L+ G +D A
Sbjct: 246 RATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA-- 303
Query: 251 FFDIM----VKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
F+IM K++ DD +Y +M+ L G++DE +++
Sbjct: 304 -FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 342
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 16/278 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G Y+ L+ DG + L EE+ K G+ D Y L+ G+ +
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK--GLAPDVFTYNILINGHCKE 227
Query: 61 GMEEEAMECYNEAVGENSS---VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G ++A+E + EN S V+ + V S++ AL G+ E KLFD P
Sbjct: 228 GNVKKALEIF-----ENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 282
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+L +N + + + G A E+ +M + R +PD +++N L+ LC G + E
Sbjct: 283 -----DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 337
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A +L EM+ +G+ PD TY L+ V D +M++ G P L YN L+
Sbjct: 338 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 397
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
L + G D+A++ MV+ + DD++Y +++ L+
Sbjct: 398 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 435
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 10/246 (4%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
+ V Y +++ G+ +G + A++ E + E + + +V+ C G+ DEA+
Sbjct: 70 PNAVTYNTVIAGFCSRGRVQAALDIMRE-MRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128
Query: 105 KLFDRM--KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
K+FD M K E P + +N + GYC QG+ A+ +M E + ++
Sbjct: 129 KVFDEMLTKGEVKPEAVM------YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 182
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
N L+ L +G EA EL EM KG+ PD +TY +L++ + V F M
Sbjct: 183 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 242
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
G+R + Y L+ L + G + E FD V++ ++ D Y ++ + S G +D
Sbjct: 243 RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 302
Query: 282 ILEIVG 287
EI+G
Sbjct: 303 AFEIMG 308
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 7/171 (4%)
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
RL + +FN+M C G+ A+E+ R+M P+ +++N +I C G + A
Sbjct: 36 RLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAA 91
Query: 179 EELYGEMSDK-GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG-LRPNLAVYNRLV 236
++ EM ++ G+ P++YTYG ++ +V RVD+ F +M+ G ++P +YN L+
Sbjct: 92 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 151
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
G G LD A + D MV++ + M A+Y ++ AL G+ E E+V
Sbjct: 152 GGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 202
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 13/252 (5%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ + N +L LC+ GK AL+L +M P+ AV ++N + G+C +GR
Sbjct: 37 LPLCTTTFNIMLRHLCSAGKPARALELLRQM------PRPNAV---TYNTVIAGFCSRGR 87
Query: 140 FKDAIEVFRKMGEY-RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VNPDEYTY 197
+ A+++ R+M E +P+ ++ +I CK G + EA +++ EM KG V P+ Y
Sbjct: 88 VQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY 147
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-V 256
L+ + ++D Y +MV+ G+ +A YN LV L G EA + M
Sbjct: 148 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 207
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
K L D +Y ++ G + + LEI + G+ + + LSK+G+ +
Sbjct: 208 KGLAPDVFTYNILINGHCKEGNVKKALEIFEN-MSRRGVRATVVTYTSLIYALSKKGQVQ 266
Query: 317 EVVKLMEKKERE 328
E KL ++ R
Sbjct: 267 ETDKLFDEAVRR 278
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 146/288 (50%), Gaps = 15/288 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++ F AD ++ YLM G R G D + ++ + V+Y +L+ GY +
Sbjct: 296 MLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN------PNTVLYNTLINGYVVS 349
Query: 61 GMEEEAMEC-YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G EEA + Y V + + A N ++D LC G AL+ D M + P
Sbjct: 350 GRFEEAKDLLYKNMVI--AGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEP-- 405
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ ++ ++ DG+C QG F++A +V M S +T+ +N LI LCK+G + +A
Sbjct: 406 ---NVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
++YGEMS KG PD YT+ L+ + +++++ +R M+ G+ N YN L+
Sbjct: 463 QMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAF 522
Query: 240 VQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+++ ++ +A ++ + +D+ +Y ++KAL G ++ L ++
Sbjct: 523 LRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLI 570
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 119/241 (49%), Gaps = 15/241 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D ++ L+ G ++ + L+ ++ L GV+++ V Y +L+ + +
Sbjct: 471 KGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML--LEGVIANTVTYNTLIHAFLRLELI 528
Query: 64 EEAMECYNEAVGENS--SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
++A ++ VGE + + N ++ ALC G ++ L L ++M E P
Sbjct: 529 QQA----DKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFP---- 580
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ S N++ + +C G+ DA++ R M + +PD +++N+LI+ LCK G EA L
Sbjct: 581 -SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL 639
Query: 182 YGEMSDKGVNPDEYTYGLLMD-ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ + KG++PD TY L+ C+E +D K V +G PN ++ L+ V
Sbjct: 640 FNGLQAKGIHPDAVTYNTLISRYCYE-GLFNDACQLLFKGVSNGFIPNEITWSILINYFV 698
Query: 241 Q 241
+
Sbjct: 699 K 699
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 151/346 (43%), Gaps = 49/346 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + GF D ++ ++ G + G +E+ +K G + + Y L+ G+ +
Sbjct: 363 MVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK--GFEPNVITYTILIDGFCKQ 420
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA + N + S ++ V N ++ ALC +GK +AL+++ M ++ P
Sbjct: 421 GHFEEASKVVNSMSAKGLS--LNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKP--- 475
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKM------------------------------ 150
++ +FN + G C + ++A+ ++R M
Sbjct: 476 --DIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADK 533
Query: 151 --GEYR---CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
GE R C D +++N LI LCK G + L +M + + P + +L+++
Sbjct: 534 LVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFC 593
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDA 264
+V+D + R M+ GL P++ YN L+ L ++G EA + F+ + K + D
Sbjct: 594 RTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAV 653
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIE----FSEELQEFVK 306
+Y ++ G ++ +++ + +G I +S + FVK
Sbjct: 654 TYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 142/346 (41%), Gaps = 54/346 (15%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY++ +M F + D L ++ + G V + ++Y L+ EAM
Sbjct: 198 PTVYTFGVVMKAFCMVNEVDSACSLLRDMTKH--GCVPNSIIYQMLIHALSENNRVNEAM 255
Query: 68 ECYNEA--VGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM--------------- 110
+ E +G V+ N V+ LC G+ EA KL DRM
Sbjct: 256 KLLEEMFLMGCEPDVQ----TFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311
Query: 111 -----------------KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE-VFRKMGE 152
NP N +N + +GY GRF++A + +++ M
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNP------NTVLYNTLINGYVVSGRFEEAKDLLYKNMVI 365
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
PD +FN +ID LCK G L A E EM KG P+ TY +L+D + ++
Sbjct: 366 AGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE 425
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
+ M GL N YN L+G L + G + +A + M K K D ++ ++
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIY 485
Query: 272 ALSDGGKLDEILEIVGGILDDGGI----EFSEELQEFVKGELSKEG 313
L K++E L + +L +G I ++ + F++ EL ++
Sbjct: 486 GLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ-GRFKDAIEVFR 148
++D L N G+F KL +MK+E K S ++ Y G+ G A +
Sbjct: 100 LIDKLGNVGEFKMIDKLLKQMKDEGCVFKE------SLFILIMRYYGKAGLPGQATRLLL 153
Query: 149 KM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M G Y P S+N +++ L A ++ +M +G++P YT+G++M A V
Sbjct: 154 DMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMV 213
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASY 266
N VD + R M G PN +Y L+ L + ++EA ++ + + D ++
Sbjct: 214 NEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTF 273
Query: 267 KFMMKALSDGGKLDE 281
++ L G++ E
Sbjct: 274 NDVIHGLCKAGRIHE 288
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 126 bits (317), Expect = 2e-26, Method: Composition-based stats.
Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 10/313 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D VVY+ ++ GF + G+ +LF+E++ K +V D V Y S++ G G
Sbjct: 342 GVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRK--KIVPDIVTYTSVIHGICKSGKMV 399
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA E +NE + + ++ V +++D C G+ EA + ++M K L N+
Sbjct: 400 EAREMFNEMLVK--GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQ-----KGLTPNV 452
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ +ADG C G A E+ +M P+ ++N +++ LCK G + + +L E
Sbjct: 453 VTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEE 512
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G PD TY LMDA ++ + R M++ L+P L +N L+ GM
Sbjct: 513 MDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGM 572
Query: 245 LDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L++ + + M++K M +A ++ +MK + EI + D G + S
Sbjct: 573 LEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNI 632
Query: 304 FVKGELSKEGREE 316
+KG +E
Sbjct: 633 LIKGHCKARNMKE 645
Score = 100 bits (250), Expect = 9e-19, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 126/282 (44%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG D V Y+ L+ G+ + G+ F + ++ +K G+ + V Y +L G
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQK--GLTPNVVTYTALADGLCKN 465
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A E +E ++ + N++++ LC G ++ +KL + M P +
Sbjct: 466 GEIDVANELLHEM--SRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTI 523
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + D YC G A E+ R M R P ++FN L++ C +GML + E
Sbjct: 524 -----TYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGER 578
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M +KG+ P+ T+ LM N + ++ M D G+ P+ YN L+
Sbjct: 579 LIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHC 638
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ + EA MV+K + A+Y +++ K E
Sbjct: 639 KARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVE 680
Score = 99.4 bits (246), Expect = 3e-18, Method: Composition-based stats.
Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 11/258 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ L G ++G+ D L E+ K G+ + Y +++ G
Sbjct: 443 MVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRK--GLQPNVYTYNTIVNGLCKI 500
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+ ++ E + + + +++DA C G+ +A +L M N KRL
Sbjct: 501 GNIEQTVKLMEEM--DLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLN-----KRL 553
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLC-KNGMLAEAE 179
L +FNV+ +G+C G +D + M E P+ +FN+L+ Q C KN M A E
Sbjct: 554 QPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTE 613
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+Y M D+GV PD TY +L+ + + + ++MV+ G A Y+ L+
Sbjct: 614 -IYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGF 672
Query: 240 VQVGMLDEAKSFFDIMVK 257
+ EA+ F+ M K
Sbjct: 673 YKRKKFVEARKLFEEMRK 690
Score = 97.4 bits (241), Expect = 1e-17, Method: Composition-based stats.
Identities = 64/245 (26%), Positives = 121/245 (49%), Gaps = 16/245 (6%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+++ LC NG+ EA +L M+ P + + + G+C G A ++F
Sbjct: 316 NNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVV-----YTTVISGFCKLGNVSAACKLF 370
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M + PD +++ ++I +CK+G + EA E++ EM KG+ PDE TY L+D +
Sbjct: 371 DEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKA 430
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+ + + +MV GL PN+ Y L L + G +D A M +K L+ + +Y
Sbjct: 431 GEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTY 490
Query: 267 KFMMKALSDGGKLDEILEI-----VGGILDDGGIEFSEELQEFVK-GELSKEGREEEVVK 320
++ L G +++ +++ + G D I ++ + + K GE++K E+++
Sbjct: 491 NTIVNGLCKIGNIEQTVKLMEEMDLAGFYPD-TITYTTLMDAYCKMGEMAK---AHELLR 546
Query: 321 LMEKK 325
+M K
Sbjct: 547 IMLNK 551
Score = 77.8 bits (190), Expect = 8e-12, Method: Composition-based stats.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + Y+ ++ G + G+ + +L EE+ L G D + Y +LM Y
Sbjct: 478 MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMD--LAGFYPDTITYTTLMDAYCKM 535
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A E + N ++ + V N +++ C +G ++ +L + M + P
Sbjct: 536 GEMAKAHELLR--IMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMP--- 590
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +FN + YC + + E+++ M + PD+ ++N LI CK + EA
Sbjct: 591 --NATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWF 648
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
L+ EM +KG + TY L+ ++ + + F +M GL +Y+ V
Sbjct: 649 LHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 6/200 (3%)
Query: 95 CNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
CN A+K+F E P + N S N++ C G+ ++A + +M +
Sbjct: 218 CNFEGIKIAVKVF-----EEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRG 272
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
PD +S+ ++ C+ G L + +L E+ KG+ PDEY Y ++ + V +
Sbjct: 273 NFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAE 332
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKAL 273
R M G+ P+ VY ++ ++G + A FD M KK+ D +Y ++ +
Sbjct: 333 QLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGI 392
Query: 274 SDGGKLDEILEIVGGILDDG 293
GK+ E E+ +L G
Sbjct: 393 CKSGKMVEAREMFNEMLVKG 412
Score = 55.1 bits (131), Expect = 6e-05, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 87/207 (42%), Gaps = 11/207 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFE-ELKEKLGGVVSDGVVYGSLMKGYFM 59
M + GF D + Y+ LM + + G+ L L ++L + V + LM G+ M
Sbjct: 513 MDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTL---VTFNVLMNGFCM 569
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
GM E+ + + +A NS++ C +++ M + P
Sbjct: 570 SGMLEDGERLIEWML--EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMP-- 625
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ ++N++ G+C K+A + ++M E S +++ LI K EA
Sbjct: 626 ---DSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEAR 682
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFE 206
+L+ EM G+ ++ Y + +D +E
Sbjct: 683 KLFEEMRKHGLVAEKDIYDIFVDVNYE 709
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 147/310 (47%), Gaps = 10/310 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D VVY+ L+ GF + G+ ++LF+E+K K +V D V Y S++ G G EA
Sbjct: 355 PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRK--KIVPDFVTYTSMIHGLCQAGKVVEAR 412
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ ++E + + +K V +++D C G+ EA L ++M K L N+ ++
Sbjct: 413 KLFSEMLSK--GLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVE-----KGLTPNVVTY 465
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ DG C G A E+ +M E P+ ++N LI+ LCK G + +A +L EM
Sbjct: 466 TALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDL 525
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G PD TY +MDA ++ + R M+D GL+P + +N L+ GML++
Sbjct: 526 AGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLED 585
Query: 248 AKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
+ M+ K M +A ++ +MK + +EI G+ G + + +K
Sbjct: 586 GERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIK 645
Query: 307 GELSKEGREE 316
G +E
Sbjct: 646 GHCKARNMKE 655
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 10/291 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D V YS ++ G+ + V +L EEL+ K G+ + Y S++ G
Sbjct: 281 RGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRK--GLKPNQYTYNSIISFLCKTGRV 338
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA + V +N + V +++ +G KLFD MK K++ +
Sbjct: 339 VEAEQVLR--VMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKR-----KKIVPD 391
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ M G C G+ +A ++F +M PD +++ LID CK G + EA L+
Sbjct: 392 FVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHN 451
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M +KG+ P+ TY L+D + VD +M + GL+PN+ YN L+ L +VG
Sbjct: 452 QMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVG 511
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+++A + M + D +Y +M A G++ + E++ +LD G
Sbjct: 512 NIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V Y+ L+ G+ + G+ F L ++ EK G+ + V Y +L+ G
Sbjct: 418 MLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEK--GLTPNVVTYTALVDGLCKC 475
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A E +E ++ + N++++ LC G ++A+KL + M P +
Sbjct: 476 GEVDIANELLHEM--SEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTI 533
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + D YC G A E+ R M + P ++FN L++ C +GML + E
Sbjct: 534 -----TYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGER 588
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M DKG+ P+ T+ LM N + ++ M G+ P+ YN L+
Sbjct: 589 LIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHC 648
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ + EA MV+K + ASY ++K K +E
Sbjct: 649 KARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEE 690
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 9/255 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ L+ G + G+ D L E+ EK G+ + Y +L+ G
Sbjct: 453 MVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEK--GLQPNVCTYNALINGLCKV 510
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A++ E + + + +++DA C G+ +A +L M + K L
Sbjct: 511 GNIEQAVKLMEEM--DLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLD-----KGL 563
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +FNV+ +G+C G +D + + M + P+ +FN+L+ Q C + E
Sbjct: 564 QPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIE 623
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+Y M +GV PD TY +L+ + + + ++MV+ G A YN L+
Sbjct: 624 IYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFY 683
Query: 241 QVGMLDEAKSFFDIM 255
+ +EA+ F+ M
Sbjct: 684 KRKKFEEARKLFEEM 698
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 6/215 (2%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
V + V+ N +L LC GK EA L +M+ N P ++ S++V+ DGYC +
Sbjct: 248 VCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVP-----DVVSYSVIVDGYCQVEQ 302
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+++ ++ P+ ++N++I LCK G + EAE++ M ++ + PD Y
Sbjct: 303 LGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTT 362
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
L+ + V F +M + P+ Y ++ L Q G + EA+ F M+ K
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG 422
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
LK D+ +Y ++ G++ E + +++ G
Sbjct: 423 LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG 457
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 9/233 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + Y+ L+ G + G+ + +L EE+ L G D + Y ++M Y G
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMD--LAGFFPDTITYTTIMDAYCKMGEM 548
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A E + + ++ + V N +++ C +G ++ +L M ++ P N
Sbjct: 549 AKAHELLR--IMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMP-----N 601
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+FN + YC + + IE+++ M PDT ++N LI CK + EA L+
Sbjct: 602 ATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHK 661
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EM +KG + +Y L+ ++ + ++ F +M G +Y+ V
Sbjct: 662 EMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFV 714
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV----MADGYCGQGRFKDAIEV 146
L G EA KLFD++ N + V++ S N+ +++ + G + A V
Sbjct: 188 FQVLVEAGLLLEAGKLFDKLLNYG-----VLVSVDSCNLFLARLSNSFDG---IRTAFRV 239
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
FR+ E +T+S+N ++ LC+ G + EA L +M +G PD +Y +++D +
Sbjct: 240 FREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQ 299
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDAS 265
V ++ ++ GL+PN YN ++ L + G + EA+ +M +++ D+
Sbjct: 300 VEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVV 359
Query: 266 YKFMMKALSDGGKL 279
Y ++ G +
Sbjct: 360 YTTLISGFGKSGNV 373
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 134/273 (49%), Gaps = 8/273 (2%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V ++ ++ GF + G + + E L G V + V Y +L+ G+ G EA++
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSM--GCVPNAVTYTTLIDGFCKSGNLSEALQ 231
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + + + V N+++ LC + + A +L +MK + L + ++
Sbjct: 232 LFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMK-----ARDLRADTFTYT 286
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ DG C QGR + VF +M C+P +++ L+ CK G L +A+++ M K
Sbjct: 287 TLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAK 346
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ PD TY +L++ FE +V +F K++ P VY+ LV + ++DEA
Sbjct: 347 GIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEA 406
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLD 280
K + +++ ++L D A+ K +++ L G+ D
Sbjct: 407 VKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 7/242 (2%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V + V Y+ L+ GF + G+ +LF+ L + + V + +L+ G E
Sbjct: 205 GCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLE 264
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A E + + ++ +++D LC G+ E ++F+ M E P ++
Sbjct: 265 HAFELVKQMKARD--LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNP-----SV 317
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + +C G +DA +V R M PD ++ L++ L +NG + A E + +
Sbjct: 318 VTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEK 377
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ + P Y L+ C + VD+ Y+ +M+D L P+ A LV L + G
Sbjct: 378 ILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437
Query: 245 LD 246
D
Sbjct: 438 TD 439
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 112/250 (44%), Gaps = 12/250 (4%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
+ L+ G+ + ++A+E ++E + +N ++ A +++ C + D+A +L
Sbjct: 71 ITLNILINGFCELQLLDKALELFHE-MEKNFALVPEATTYTAIIKCYCKMDRLDQARQLL 129
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-PDTLSFNNLI 166
+ + ++ + +A G+C R +A ++ M E + + PD +++N +I
Sbjct: 130 EESSC-------CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVII 182
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV--DSG 224
CK G + EA E+ + G P+ TY L+D + + + F+ + D
Sbjct: 183 HGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHH 242
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEIL 283
PN+ +N L+ L + L+ A M + L+ D +Y +M L G+ E+
Sbjct: 243 AEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVS 302
Query: 284 EIVGGILDDG 293
+ +L +G
Sbjct: 303 RVFEEMLREG 312
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 110/241 (45%), Gaps = 19/241 (7%)
Query: 89 SVLDA-LCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
SVL A LC G+ EA++ +++M H P NL N++ C G A+ +F
Sbjct: 7 SVLIAGLCKAGRLGEAVECYNQMLERHCVP-----NLRDINLLLASLCQAGTMDQAMAIF 61
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK-GVNPDEYTYGLLMDACFE 206
R + +CSP ++ N LI+ C+ +L +A EL+ EM + P+ TY ++ +
Sbjct: 62 RGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCK 118
Query: 207 VNRVDDGATYFRKMVD--SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMD 262
++R+D R++++ S ++ + + +DEA MV+K K D
Sbjct: 119 MDRLDQA----RQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
++ ++ G++ E E++ ++ G + + + G K G E ++L
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDG-FCKSGNLSEALQLF 233
Query: 323 E 323
+
Sbjct: 234 K 234
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 125/317 (39%), Gaps = 49/317 (15%)
Query: 50 YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR 109
+ L+ G G EA+ECYN+ + + + + N +L +LC G D+A+ +F
Sbjct: 6 FSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDI--NLLLASLCQAGTMDQAMAIFRG 63
Query: 110 MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE-YRCSPDTLSFNNLIDQ 168
++ + ++ + N++ +G+C A+E+F +M + + P+ ++ +I
Sbjct: 64 IQ--------CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115
Query: 169 LCKNGMLAEAEELYGEMS----------------------------------DKGVNPDE 194
CK L +A +L E S K PD
Sbjct: 116 YCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
+ +++ + RV + +V G PN Y L+ + G L EA F +
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235
Query: 255 MVKK---LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSK 311
+ + + + ++ ++ L +L+ E+V + + + G L K
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDG-LCK 294
Query: 312 EGREEEVVKLMEKKERE 328
+GR EV ++ E+ RE
Sbjct: 295 QGRTSEVSRVFEEMLRE 311
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +F+V+ G C GR +A+E + +M E C P+ N L+ LC+ G + +A ++
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIF 61
Query: 183 GEMSDKGV--NPDEYTYGLLMDACFEVNRVDDGATYFRKM-VDSGLRPNLAVYNRLVGKL 239
+G+ +P T +L++ E+ +D F +M + L P Y ++
Sbjct: 62 -----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCY 116
Query: 240 VQVGMLDEAKSFFD 253
++ LD+A+ +
Sbjct: 117 CKMDRLDQARQLLE 130
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P+ +F+ LI LCK G L EA E Y +M ++ P+ LL+ + + +D
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM--DDASYKFMMKALS 274
FR + S P++ N L+ ++ +LD+A F M K + + +Y ++K
Sbjct: 61 FRGIQCS---PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117
Query: 275 DGGKLDE 281
+LD+
Sbjct: 118 KMDRLDQ 124
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 124/255 (48%), Gaps = 10/255 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G VA VVY+ L+ G R G +D +LF E+ K G+ D V + SL+ G +
Sbjct: 220 MTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSK--GLQPDHVTFTSLVYGLGVA 277
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + EA + + N ++D LC + + DEA ++F ++ + P
Sbjct: 278 GRASEARRIFQEA--RDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVP--- 332
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +FN + DG C GR DA + M C+PD +N LID L K+G + EA +
Sbjct: 333 --DVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQ 390
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM G PD TY L+D + R++D F ++ G N YN ++ L
Sbjct: 391 LLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLC 449
Query: 241 QVGMLDEAKSFFDIM 255
G +DEA F+ M
Sbjct: 450 MAGRVDEAYKLFNGM 464
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 140/286 (48%), Gaps = 9/286 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + Y+ ++ G + G D F LFEE+ + G+V+ VVY SL+ G G
Sbjct: 188 RGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSE--GLVATRVVYNSLIHGLGRSGRA 245
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A + + E + + ++ V S++ L G+ EA ++F ++ L VN
Sbjct: 246 DAAAKLFREMLSKG--LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCA---LDVN 300
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +NV+ D C R +A E+F ++ E PD +FN L+D LCK+G + +A L G
Sbjct: 301 L--YNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLG 358
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M G PD Y L+D + RV++ +M G P++ YN L+ + + G
Sbjct: 359 DMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGG 418
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
+++A F+ + K + +Y ++ L G++DE ++ G+
Sbjct: 419 RIEDALRLFEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGM 464
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 15/282 (5%)
Query: 50 YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR 109
Y SL+ + G ++A+ Y V S ++ N +++A + D KLF+
Sbjct: 92 YNSLIDAFVKAGYTQKALAVYR--VMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEE 149
Query: 110 MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQL 169
M+N++ P N+ +++++ D C G + A++VF M C P+ ++ ++ID L
Sbjct: 150 MQNQNCSP-----NVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGL 204
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
K+G + +A L+ EM+ +G+ Y L+ R D A FR+M+ GL+P+
Sbjct: 205 GKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDH 264
Query: 230 AVYNRLVGKLVQVGMLDEAKSFF----DIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ LV L G EA+ F D+ +D Y ++ L +LDE EI
Sbjct: 265 VTFTSLVYGLGVAGRASEARRIFQEARDV---GCALDVNLYNVLIDTLCKSKRLDEAWEI 321
Query: 286 VGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
G + +DG + + G L K GR + L+ +R
Sbjct: 322 FGELEEDGLVPDVYTFNALMDG-LCKSGRIHDAFILLGDMKR 362
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 157/361 (43%), Gaps = 43/361 (11%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE------------------KLGGV--- 43
G D ++ LM F + D V++LFEE++ K GGV
Sbjct: 119 GLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKA 178
Query: 44 -------VSDGV-----VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
S G Y S++ G G ++A + E E + + V NS++
Sbjct: 179 LKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEG--LVATRVVYNSLI 236
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
L +G+ D A KLF M ++ P + +F + G GR +A +F++
Sbjct: 237 HGLGRSGRADAAAKLFREMLSKGLQPDHV-----TFTSLVYGLGVAGRASEARRIFQEAR 291
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ C+ D +N LID LCK+ L EA E++GE+ + G+ PD YT+ LMD + R+
Sbjct: 292 DVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIH 351
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMM 270
D M +G P++ VYN L+ L + G ++EA + ++ + D +Y ++
Sbjct: 352 DAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKA 330
GG++++ L + I G + + G L GR +E KL ++E
Sbjct: 412 DESCKGGRIEDALRLFEEI-SAKGFANTVTYNTILNG-LCMAGRVDEAYKLFNGMKQETV 469
Query: 331 E 331
+
Sbjct: 470 D 470
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 2/199 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F +A GY G + ++E ++M +RC+ ++N+LID K G +A +Y M
Sbjct: 57 FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMG 116
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G+ PD YT+ +LM+A + RVD F +M + PN+ Y+ L+ + + G ++
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVE 176
Query: 247 EA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
+A K F D+ + + + +Y M+ L G +D+ + + +G + +
Sbjct: 177 KALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLI 236
Query: 306 KGELSKEGREEEVVKLMEK 324
G L + GR + KL +
Sbjct: 237 HG-LGRSGRADAAAKLFRE 254
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 7/228 (3%)
Query: 98 GKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
G +++++ RM+ R A+ ++N + D + G + A+ V+R MG+ P
Sbjct: 68 GLLEKSVEALKRMEGH-----RCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRP 122
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
DT +FN L++ K + +L+ EM ++ +P+ TY +L+DA + V+ F
Sbjct: 123 DTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVF 182
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDG 276
M G RPN+ Y ++ L + G +D+A F+ M + L Y ++ L
Sbjct: 183 LDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRS 242
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
G+ D ++ +L G V G L GR E ++ ++
Sbjct: 243 GRADAAAKLFREMLSKGLQPDHVTFTSLVYG-LGVAGRASEARRIFQE 289
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 134/273 (49%), Gaps = 8/273 (2%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V ++ ++ GF + G + + E L G V + V Y +L+ G+ G EA++
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSM--GCVPNAVTYTTLIDGFCKSGNLSEALQ 231
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + + + V N+++ LC + + A +L +MK + L + ++
Sbjct: 232 LFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMK-----ARDLRADTFTYT 286
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ DG C QGR + VF +M C+P +++ L+ CK G L +A+++ M K
Sbjct: 287 TLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAK 346
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ PD TY +L++ FE +V +F K++ P VY+ LV + ++DEA
Sbjct: 347 GIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEA 406
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLD 280
K + +++ ++L D A+ K +++ L G+ D
Sbjct: 407 VKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 7/242 (2%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V + V Y+ L+ GF + G+ +LF+ L + + V + +L+ G E
Sbjct: 205 GCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLE 264
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A E + + ++ +++D LC G+ E ++F+ M E P ++
Sbjct: 265 HAFELVKQMKARD--LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNP-----SV 317
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + +C G +DA +V R M PD ++ L++ L +NG + A E + +
Sbjct: 318 VTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEK 377
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ + P Y L+ C + VD+ Y+ +M+D L P+ A LV L + G
Sbjct: 378 ILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437
Query: 245 LD 246
D
Sbjct: 438 TD 439
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 112/250 (44%), Gaps = 12/250 (4%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
+ L+ G+ + ++A+E ++E + +N ++ A +++ C + D+A +L
Sbjct: 71 ITLNILINGFCELQLLDKALELFHE-MEKNFALVPEATTYTAIIKCYCKMDRLDQARQLL 129
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-PDTLSFNNLI 166
+ + ++ + +A G+C R +A ++ M E + + PD +++N +I
Sbjct: 130 EESSC-------CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVII 182
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV--DSG 224
CK G + EA E+ + G P+ TY L+D + + + F+ + D
Sbjct: 183 HGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHH 242
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEIL 283
PN+ +N L+ L + L+ A M + L+ D +Y +M L G+ E+
Sbjct: 243 AEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVS 302
Query: 284 EIVGGILDDG 293
+ +L +G
Sbjct: 303 RVFEEMLREG 312
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 126/317 (39%), Gaps = 49/317 (15%)
Query: 50 YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR 109
+ L+ G G EA+ECYN+ + + + + N +L +LC GK D+A+ +F
Sbjct: 6 FSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDI--NLLLASLCQAGKMDQAMAIFRG 63
Query: 110 MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE-YRCSPDTLSFNNLIDQ 168
++ + ++ + N++ +G+C A+E+F +M + + P+ ++ +I
Sbjct: 64 IQ--------CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115
Query: 169 LCKNGMLAEAEELYGEMS----------------------------------DKGVNPDE 194
CK L +A +L E S K PD
Sbjct: 116 YCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
+ +++ + RV + +V G PN Y L+ + G L EA F +
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235
Query: 255 MVKK---LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSK 311
+ + + + ++ ++ L +L+ E+V + + + G L K
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDG-LCK 294
Query: 312 EGREEEVVKLMEKKERE 328
+GR EV ++ E+ RE
Sbjct: 295 QGRTSEVSRVFEEMLRE 311
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +F+V+ G C GR +A+E + +M E C P+ N L+ LC+ G + +A ++
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIF 61
Query: 183 GEMSDKGV--NPDEYTYGLLMDACFEVNRVDDGATYFRKM-VDSGLRPNLAVYNRLVGKL 239
+G+ +P T +L++ E+ +D F +M + L P Y ++
Sbjct: 62 -----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCY 116
Query: 240 VQVGMLDEAKSFFD 253
++ LD+A+ +
Sbjct: 117 CKMDRLDQARQLLE 130
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 5/132 (3%)
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P+ +F+ LI LCK G L EA E Y +M ++ P+ LL+ + + ++D
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM--DDASYKFMMKALS 274
FR + S P++ N L+ ++ +LD+A F M K + + +Y ++K
Sbjct: 61 FRGIQCS---PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117
Query: 275 DGGKLDEILEIV 286
+LD+ +++
Sbjct: 118 KMDRLDQARQLL 129
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 144/322 (44%), Gaps = 10/322 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ LM G +GD D L L G V Y +++KG
Sbjct: 228 MRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSH--GCKPSTVNYNTVLKGLCSA 285
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A E E + EN + N V+ +LC G +A++L ++M ++H
Sbjct: 286 ERWGDADELVTEMLRENCPPNEATF--NVVIYSLCRKGLLQQAIQLLEKM-SKHG----C 338
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N + +G C Q A+ + KM Y C PD +++N L+ LC +AEE
Sbjct: 339 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEE 398
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M+ G PD T+ L+ + + D F++M D G PN Y+ ++ L
Sbjct: 399 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 458
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+ LD+A F+ M K D Y+ + + L+D ++E ++ V L D GI
Sbjct: 459 KATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRK-LQDSGISPHTV 517
Query: 301 LQEFVKGELSKEGREEEVVKLM 322
L + L + G+ E + +M
Sbjct: 518 LYNAILLGLCRNGKTEFAIDIM 539
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 139/277 (50%), Gaps = 16/277 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+YS R G +L E++ + G ++ V Y +++ G + + AM
Sbjct: 313 VIYS-----LCRKGLLQQAIQLLEKMSKH--GCTANIVTYNAIINGLCEQRNVDGAMGLL 365
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
++ ++ K V N++L LC+ ++ +A +L D M P + +FN +
Sbjct: 366 SKM--KSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNV-----TFNTL 418
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
C +G DAIEVF++M + C+P++++++ +I L K L +A EL+ EM KG
Sbjct: 419 IGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGF 478
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
NPD+ Y LL + + + +++ RK+ DSG+ P+ +YN ++ L + G + A
Sbjct: 479 NPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 537
Query: 251 FFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIV 286
MV M DD +Y +++ L+ G L+E E++
Sbjct: 538 IMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 116/268 (43%), Gaps = 19/268 (7%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
V GD D RL E D + L++ +G ++A E A G ++
Sbjct: 81 LVHRGDLDAALRLVESSPRP-----PDAALANRLVRDLCRRGRPDDA-ERVVGACGPAAT 134
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
V VA ++ D C G+ +A ++ M + N ++N + C +G+
Sbjct: 135 V----VAYGALTDGYCRAGRLGDARRVVGGMP--------VQPNAYTYNPLIHTLCERGQ 182
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+DA+ V M C+PD +++N L++ CK +A EL M +G P+ TY +
Sbjct: 183 VRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNV 242
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
LMD VDD R + G +P+ YN ++ L +A M+++
Sbjct: 243 LMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLREN 302
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIV 286
++A++ ++ +L G L + ++++
Sbjct: 303 CPPNEATFNVVIYSLCRKGLLQQAIQLL 330
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 11/240 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G + V YG+L GY G +A VG V+ +A N ++ LC G+
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDA----RRVVG-GMPVQPNAYTYNPLIHTLCERGQVR 184
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+AL + D M + A ++ ++N++ + C ++ A+E+ M C+P+ ++
Sbjct: 185 DALSVLDDMLC-----RGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVT 239
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+N L+D +C G + +A EL + G P Y ++ R D +M+
Sbjct: 240 YNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEML 299
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
PN A +N ++ L + G+L +A + M K + +Y ++ L + +D
Sbjct: 300 RENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVD 359
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G L + + + G + D V + +L+ KG+
Sbjct: 372 GCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQN--GCLPDNVTFNTLIGFLCQKGLMV 429
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+E + + + +++ ++++ L K D+AL+LF+ M ++ P ++
Sbjct: 430 DAIEVFKQM--PDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI---- 483
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ ++A+ ++AI+ RK+ + SP T+ +N ++ LC+NG A ++
Sbjct: 484 --YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAY 541
Query: 185 MSDKGVNPDEYTYGLLMD 202
M G PD+ TY +L++
Sbjct: 542 MVSSGCMPDDLTYVILIE 559
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 150/313 (47%), Gaps = 16/313 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V Y+ ++ G R GD+ L +++E+ V +D Y +++
Sbjct: 174 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER--NVKADVFTYSTIIDSLCRD 231
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF-DEALKLFDRMKNEHNPPKR 119
G + A+ + E E +K S V NS++ LC GK+ D AL L D + E P
Sbjct: 232 GCIDAAISLFKEM--ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP--- 286
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ +FNV+ D + +G+ ++A E++++M SP+ +++N L+D C L+EA
Sbjct: 287 ---NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 343
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ M +PD T+ L+ V RVDDG FR + GL N Y+ LV
Sbjct: 344 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 403
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGI----LDDGG 294
Q G + A+ F MV + D +Y ++ L D GKL++ LEI + +D G
Sbjct: 404 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 463
Query: 295 IEFSEELQEFVKG 307
+ ++ ++ KG
Sbjct: 464 VMYTTIIEGMCKG 476
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 141/283 (49%), Gaps = 21/283 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + V + + ++ L+ FV++G L++E+ + G+ + + Y +LM GY M+
Sbjct: 279 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR--GISPNIITYNTLMDGYCMQ 336
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR- 119
EA + V S + V S++ C + D+ +K+F N KR
Sbjct: 337 NRLSEANNMLDLMVRNKCSPDI--VTFTSLIKGYCMVKRVDDGMKVF------RNISKRG 388
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L N +++++ G+C G+ K A E+F++M + PD +++ L+D LC NG L +A
Sbjct: 389 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 448
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
E++ ++ ++ Y +++ + +V+D F + G++PN+ Y ++ L
Sbjct: 449 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 508
Query: 240 VQVGMLDEAKSFFDIMVKKLKMD-----DASYKFMMKA-LSDG 276
+ G L EA +I+++K++ D D +Y +++A L DG
Sbjct: 509 CKKGSLSEA----NILLRKMEEDGNAPNDCTYNTLIRAHLRDG 547
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+++ L GK EA+ L DRM P ++ ++N + +G C G A+++
Sbjct: 152 NTLIKGLFLEGKVSEAVVLVDRMVENGCQP-----DVVTYNSIVNGICRSGDTSLALDLL 206
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
RKM E D +++ +ID LC++G + A L+ EM KG+ TY L+ +
Sbjct: 207 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 266
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+ +DGA + MV + PN+ +N L+ V+ G L EA + M+ + + + +Y
Sbjct: 267 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 326
Query: 267 KFMMKALSDGGKLDE 281
+M +L E
Sbjct: 327 NTLMDGYCMQNRLSE 341
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+FN + G +G+ +A+ + +M E C PD +++N++++ +C++G + A +L +M
Sbjct: 150 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 209
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
++ V D +TY ++D+ +D + F++M G++ ++ YN LV L + G
Sbjct: 210 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 269
Query: 246 DEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++ D++ +++ + ++ ++ GKL E E+ ++ G
Sbjct: 270 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 318
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 10/203 (4%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+A N+ + N+M + +C + A V K+ + PDT +FN LI L G ++EA
Sbjct: 109 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 168
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L M + G PD TY +++ RKM + ++ ++ Y+ ++ L
Sbjct: 169 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 228
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE----ILEIVGGILDDGG 294
+ G +D A S F M K +K +Y +++ L GK ++ + ++V +
Sbjct: 229 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 288
Query: 295 IEFSEELQEFVKGELSKEGREEE 317
I F+ L FV KEG+ +E
Sbjct: 289 ITFNVLLDVFV-----KEGKLQE 306
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 156/328 (47%), Gaps = 11/328 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KGF AD ++Y+ L+ GF G D +L ++ ++ + D V + +L+ + +
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR--KITPDVVAFSALIDCFVKE 330
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA E + E + + V S++D C + D+A + D M ++ P
Sbjct: 331 GKLREAEELHKEMI--QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP--- 385
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +FN++ +GYC D +E+FRKM DT+++N LI C+ G L A+E
Sbjct: 386 --NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM + V PD +Y +L+D + + F K+ S + ++ +YN ++ +
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+D+A F + +K +K D +Y M+ L G L E + + +DG
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKER 327
++ L EG + KL+E+ +R
Sbjct: 564 TYNILIRAHLG-EGDATKSAKLIEEIKR 590
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 142/311 (45%), Gaps = 45/311 (14%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ + L+ G +G L + + E G + V YG ++K G AME
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVET--GFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ E +K+ AV + ++D LC +G D A LF+ M+ K ++ + +
Sbjct: 236 RKM--EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME-----IKGFKADIIIYTTL 288
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G+C GR+ D ++ R M + + +PD ++F+ LID K G L EAEEL+ EM +G+
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 191 NPDEYTYGLLMDA-CFE----------------------------------VNRVDDGAT 215
+PD TY L+D C E N +DDG
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALS 274
FRKM G+ + YN L+ ++G L+ AK F MV ++++ D SYK ++ L
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 275 DGGKLDEILEI 285
D G+ ++ LEI
Sbjct: 469 DNGEPEKALEI 479
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 33/282 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G VAD V Y+ L+ GF G + LF+E+ + V D V Y L+ G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR--RVRPDIVSYKILLDGLCDN 470
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A+E + + E S +++ N ++ +CN K D+A LF + P K +
Sbjct: 471 GEPEKALEIFEKI--EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-----PLKGV 523
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFN----------------N 164
++ ++N+M G C +G +A +FRKM E SP+ ++N
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK 583
Query: 165 LIDQLCKNGMLAEAEEL------YGEMSDKGVNPDEYTY-GLLMDACFEVN-RVDDGATY 216
LI+++ + G +A L M G PD +T+ LL C E N V D T
Sbjct: 584 LIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTL 643
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
F+ M G +PN+ YN ++ L+ M+ + D M ++
Sbjct: 644 FKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFER 685
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+F+ + +G C +GR +A+E+ +M E P ++ N L++ LC NG +++A L M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ G P+E TYG ++ + + RKM + ++ + Y+ ++ L + G L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 246 DEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
D A + F+ M +K K D Y +++ G+ D+
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 111/253 (43%), Gaps = 11/253 (4%)
Query: 32 LFEELKEKLGGVVSDG---VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANN 88
LF ++ VSDG V Y ++ + E++A++ + E S + + +
Sbjct: 19 LFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMT--RSRPRPRLIDFS 76
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
+ + ++D L L +M+ K +A NL + ++M + C + A
Sbjct: 77 RLFSVVARTKQYDLVLDLCKQME-----LKGIAHNLYTLSIMINCCCRCRKLSLAFSAMG 131
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
K+ + PDT++F+ LI+ LC G ++EA EL M + G P T L++
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYK 267
+V D +MV++G +PN Y ++ + + G A M +K+K+D Y
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 268 FMMKALSDGGKLD 280
++ L G LD
Sbjct: 252 IIIDGLCKDGSLD 264
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 147/294 (50%), Gaps = 16/294 (5%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGVVSDGVV-YGSLMKGYFMK 60
G V D YS L+ + G +D + R+ E G V S VV Y +++ G+F +
Sbjct: 190 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPNVVAYNTVIDGFFKE 245
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + + E V + V NSV+ ALC D+A +M N KR+
Sbjct: 246 GDVNKACDLFKEMV--QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN-----KRV 298
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++N + GY G++K+A+ VF++M + PD ++ + L+ LCK G + EA +
Sbjct: 299 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 358
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M+ KG NPD ++Y ++++ + D F M+ G+ P+ +N L+
Sbjct: 359 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 418
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
GMLD+A F+ M +K D +Y+ ++ AL GK+D+ +E ++D G
Sbjct: 419 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 472
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 140/274 (51%), Gaps = 14/274 (5%)
Query: 9 DPVVYSY-LML-GFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGMEEE 65
+P V+SY +ML G+ G + LF+ + LG G+ D + L+K Y GM ++
Sbjct: 369 NPDVFSYNIMLNGYATKGCLVDMTDLFDLM---LGDGIAPDFYTFNVLIKAYANCGMLDK 425
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
AM +NE + VK V +V+ ALC GK D+A++ F++M ++ P + A
Sbjct: 426 AMIIFNEM--RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA---- 479
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+N + G+C G A E+ ++ D + F+++I+ LCK G + +A+ ++
Sbjct: 480 -YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLT 538
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ G++PD Y +LMD V +++ F MV +G+ PN+ VY LV ++G +
Sbjct: 539 VNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRI 598
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
DE S F M+++ +K Y ++ L G+
Sbjct: 599 DEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 632
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 129/280 (46%), Gaps = 10/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ ++ + D ++ K V+ + Y +L+ GY
Sbjct: 258 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK--RVLPNNWTYNNLIYGYSST 315
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + E S+ V + ++ +LC GK EA +FD M + P
Sbjct: 316 GQWKEAVRVFKEM--RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP--- 370
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+N+M +GY +G D ++F M +PD +FN LI GML +A
Sbjct: 371 --DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 428
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM D GV PD TY ++ A + ++DD F +M+D G+ P+ YN L+
Sbjct: 429 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 488
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
G L +AK +IM + +D + ++ L G++
Sbjct: 489 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 528
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 150/343 (43%), Gaps = 31/343 (9%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G D V Y ++ R G D F ++ ++ GV D Y L++G+ G
Sbjct: 436 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ--GVAPDKYAYNCLIQGFCTHGSL 493
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A E +E + N+ + + V +S+++ LC G+ +A +FD L VN
Sbjct: 494 LKAKELISEIM--NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD-----------LTVN 540
Query: 124 LG------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+G ++++ DGYC G+ + A+ VF M P+ + + L++ CK G + E
Sbjct: 541 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDE 600
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
L+ EM +G+ P Y +++D F+ R F +M +SG+ ++ YN ++
Sbjct: 601 GLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLR 660
Query: 238 KLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI----LDD 292
L + DEA F ++ +K++ + M+ + +++E ++ I L
Sbjct: 661 GLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVP 720
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
+ +S + + KEG EE + + E +R
Sbjct: 721 NVVTYSIMITNLI-----KEGLVEEAEDMFSSMQNAGCEPNSR 758
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 9/220 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VVY L+ G+ + G D LF E+ ++ G+ ++Y ++ G F
Sbjct: 573 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQR--GIKPSTILYSIIIDGLFQA 630
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A ++E S + M N VL L N FDEA+ LF ++ + +
Sbjct: 631 GRTVPAKMKFHEMT--ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN-----V 683
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N+ + N M DG R ++A ++F + R P+ ++++ +I L K G++ EAE+
Sbjct: 684 KINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAED 743
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++ M + G P+ ++ + N + Y K+
Sbjct: 744 MFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 783
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 115/237 (48%), Gaps = 9/237 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D VVYS LM G+ G + R+F+ + G+ + VVY +L+ GY G +
Sbjct: 542 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS--AGIEPNVVVYCTLVNGYCKIGRID 599
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + E + +K S + + ++D L G+ A +MK +A+++
Sbjct: 600 EGLSLFREML--QRGIKPSTILYSIIIDGLFQAGRTVPA-----KMKFHEMTESGIAMDI 652
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ G F +AI +F+++ + ++ N +ID + + + EA++L+
Sbjct: 653 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFAS 712
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+S + P+ TY +++ + V++ F M ++G PN + N +V +L++
Sbjct: 713 ISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 769
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L VN+ N + +G+C R +A+++ + E C PD S++ L+ LC G +A
Sbjct: 155 LRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 214
Query: 179 EELYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++L M++ G +P+ Y ++D F+ V+ F++MV G+ P+L YN +V
Sbjct: 215 DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVV 274
Query: 237 GKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEI 285
L + +D+A++F MV K++ ++ +Y ++ S G+ E + +
Sbjct: 275 HALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 324
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 28/200 (14%)
Query: 170 CKNGMLAEAEELYGEMSDKG-----VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
C++G A A L+ + + ++P +TY +LMD C +R + +F +++ +G
Sbjct: 96 CRSGP-ALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTG 154
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASYKFMMKALSDGGK- 278
LR N+ + N L+ + DEA DI++ + D SY ++K+L D GK
Sbjct: 155 LRVNIIIANHLLEGFCEAKRTDEA---LDILLHRTPELGCVPDVFSYSILLKSLCDQGKS 211
Query: 279 --LDEILEIV---GGILDDGGIEFSEELQEFVK-------GELSKEGREEEVVK-LMEKK 325
D++L ++ G + + ++ + F K +L KE + + L+
Sbjct: 212 GQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYN 271
Query: 326 EREKAEAKAREAEAAEAAKR 345
A KAR + AEA R
Sbjct: 272 SVVHALCKARAMDKAEAFLR 291
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 147/294 (50%), Gaps = 16/294 (5%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGVVSDGVV-YGSLMKGYFMK 60
G V D YS L+ + G +D + R+ E G V S VV Y +++ G+F +
Sbjct: 180 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPNVVAYNTVIDGFFKE 235
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + + E V + V NSV+ ALC D+A +M N KR+
Sbjct: 236 GDVNKACDLFKEMV--QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN-----KRV 288
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++N + GY G++K+A+ VF++M + PD ++ + L+ LCK G + EA +
Sbjct: 289 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 348
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M+ KG NPD ++Y ++++ + D F M+ G+ P+ +N L+
Sbjct: 349 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 408
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
GMLD+A F+ M +K D +Y+ ++ AL GK+D+ +E ++D G
Sbjct: 409 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 462
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 129/280 (46%), Gaps = 10/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ ++ + D ++ K V+ + Y +L+ GY
Sbjct: 248 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK--RVLPNNWTYNNLIYGYSST 305
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + E S+ V + ++ +LC GK EA +FD M + P
Sbjct: 306 GQWKEAVRVFKEM--RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP--- 360
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+N+M +GY +G D ++F M +PD +FN LI GML +A
Sbjct: 361 --DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 418
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM D GV PD TY ++ A + ++DD F +M+D G+ P+ YN L+
Sbjct: 419 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 478
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
G L +AK +IM + +D + ++ L G++
Sbjct: 479 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 518
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 146/333 (43%), Gaps = 11/333 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G D V Y ++ R G D F ++ ++ GV D Y L++G+ G
Sbjct: 426 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ--GVAPDKYAYNCLIQGFCTHGSL 483
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A E +E + N+ + + V +S+++ LC G+ +A +FD N P +
Sbjct: 484 LKAKELISEIM--NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV-- 539
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+N++ DGYC G+ + A+ VF M P+ + + L++ CK G + E L+
Sbjct: 540 ---YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 596
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +G+ P Y +++D FE R F +M +SG+ ++ YN ++ L +
Sbjct: 597 EMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNR 656
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
DEA F ++ +K++ + M+ + +++E ++ I + S
Sbjct: 657 CFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI-SRSRLVPSVVTY 715
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
+ L KEG EE + + E +R
Sbjct: 716 SIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 748
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L VN+ N + +G+C R +A+++ + E C PD S++ L+ LC G +A
Sbjct: 145 LRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 204
Query: 179 EELYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++L M++ G +P+ Y ++D F+ V+ F++MV G+ P+L YN +V
Sbjct: 205 DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVV 264
Query: 237 GKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEI 285
L + +D+A++F MV K++ ++ +Y ++ S G+ E + +
Sbjct: 265 HALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 314
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 114/237 (48%), Gaps = 9/237 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D VVY+ LM G+ G + R+F+ + G+ + V YG+L+ GY G +
Sbjct: 532 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS--AGIEPNVVGYGTLVNGYCKIGRID 589
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + E + +K S + + ++D L G+ A +MK +A+++
Sbjct: 590 EGLSLFREML--QRGIKPSTILYSIIIDGLFEAGRTVPA-----KMKFHEMTESGIAMDI 642
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ G F +AI +F+++ + ++ N +ID + + + EA++L+
Sbjct: 643 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFAS 702
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+S + P TY +++ + V++ F M ++G PN + N +V +L++
Sbjct: 703 ISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 759
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 9/220 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y L+ G+ + G D LF E+ ++ G+ ++Y ++ G F
Sbjct: 563 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQR--GIKPSTILYSIIIDGLFEA 620
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A ++E S + M N VL L N FDEA+ LF ++ + +
Sbjct: 621 GRTVPAKMKFHEMT--ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN-----V 673
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N+ + N M DG R ++A ++F + R P ++++ +I L K G++ EAE+
Sbjct: 674 KINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAED 733
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++ M + G P+ ++ + N + Y K+
Sbjct: 734 MFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 773
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 28/200 (14%)
Query: 170 CKNGMLAEAEELYGEMSDKG-----VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
C++G A A L+ + + ++P +TY +LMD C +R + +F +++ +G
Sbjct: 86 CRSGP-ALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTG 144
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASYKFMMKALSDGGK- 278
LR N+ + N L+ + DEA DI++ + D SY ++K+L D GK
Sbjct: 145 LRVNIIIANHLLEGFCEAKRTDEA---LDILLHRTPELGCVPDVFSYSILLKSLCDQGKS 201
Query: 279 --LDEILEIV---GGILDDGGIEFSEELQEFVK-------GELSKEGREEEVVK-LMEKK 325
D++L ++ G + + ++ + F K +L KE + + L+
Sbjct: 202 GQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYN 261
Query: 326 EREKAEAKAREAEAAEAAKR 345
A KAR + AEA R
Sbjct: 262 SVVHALCKARAMDKAEAFLR 281
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 147/294 (50%), Gaps = 16/294 (5%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGVVSDGVV-YGSLMKGYFMK 60
G V D YS L+ + G +D + R+ E G V S VV Y +++ G+F +
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPNVVAYNTVIDGFFKE 232
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + + E V + V NSV+ ALC D+A +M N KR+
Sbjct: 233 GDVNKACDLFKEMV--QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN-----KRV 285
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++N + GY G++K+A+ VF++M + PD ++ + L+ LCK G + EA +
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 345
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M+ KG NPD ++Y ++++ + D F M+ G+ P+ +N L+
Sbjct: 346 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 405
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
GMLD+A F+ M +K D +Y+ ++ AL GK+D+ +E ++D G
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 459
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 140/274 (51%), Gaps = 14/274 (5%)
Query: 9 DPVVYSY-LML-GFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGMEEE 65
+P V+SY +ML G+ G + LF+ + LG G+ D + L+K Y GM ++
Sbjct: 356 NPDVFSYNIMLNGYATKGCLVDMTDLFDLM---LGDGIAPDFYTFNVLIKAYANCGMLDK 412
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
AM +NE + VK V +V+ ALC GK D+A++ F++M ++ P + A
Sbjct: 413 AMIIFNEM--RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA---- 466
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+N + G+C G A E+ ++ D + F+++I+ LCK G + +A+ ++
Sbjct: 467 -YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLT 525
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ G++PD Y +LMD V +++ F MV +G+ PN+ VY LV ++G +
Sbjct: 526 VNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRI 585
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
DE S F M+++ +K Y ++ L G+
Sbjct: 586 DEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 619
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 129/280 (46%), Gaps = 10/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ ++ + D ++ K V+ + Y +L+ GY
Sbjct: 245 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK--RVLPNNWTYNNLIYGYSST 302
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + E S+ V + ++ +LC GK EA +FD M + P
Sbjct: 303 GQWKEAVRVFKEM--RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP--- 357
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+N+M +GY +G D ++F M +PD +FN LI GML +A
Sbjct: 358 --DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 415
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM D GV PD TY ++ A + ++DD F +M+D G+ P+ YN L+
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 475
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
G L +AK +IM + +D + ++ L G++
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 146/333 (43%), Gaps = 11/333 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G D V Y ++ R G D F ++ ++ GV D Y L++G+ G
Sbjct: 423 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ--GVAPDKYAYNCLIQGFCTHGSL 480
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A E +E + N+ + + V +S+++ LC G+ +A +FD N P +
Sbjct: 481 LKAKELISEIM--NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV-- 536
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++++ DGYC G+ + A+ VF M P+ + + L++ CK G + E L+
Sbjct: 537 ---YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFR 593
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +G+ P Y +++D F+ R F +M +SG+ ++ YN ++ L +
Sbjct: 594 EMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNR 653
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
DEA F ++ +K++ + M+ + +++E ++ I + S
Sbjct: 654 CFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI-SRSRLVPSVVTY 712
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
+ L KEG EE + + E +R
Sbjct: 713 SIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 745
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 9/220 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VVY L+ G+ + G D LF E+ ++ G+ ++Y ++ G F
Sbjct: 560 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQR--GIKPSTILYSIIIDGLFQA 617
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A ++E S + M N VL L N FDEA+ LF ++ + +
Sbjct: 618 GRTVPAKVKFHEMT--ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN-----V 670
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N+ + N M DG R ++A ++F + R P ++++ +I L K G++ EAE+
Sbjct: 671 KINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAED 730
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++ M + G P+ ++ + N + Y K+
Sbjct: 731 MFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 770
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 113/237 (47%), Gaps = 9/237 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D VVYS LM G+ G + R+F+ + G+ + VVY +L+ GY G +
Sbjct: 529 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS--AGIEPNVVVYCTLVNGYCKIGRID 586
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + E + +K S + + ++D L G+ A F M +A+++
Sbjct: 587 EGLSLFREML--QRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESG-----IAMDI 639
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ G F +AI +F+++ + ++ N +ID + + + EA++L+
Sbjct: 640 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFAS 699
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+S + P TY +++ + V++ F M ++G PN + N +V +L++
Sbjct: 700 ISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 756
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L VN+ N + +G+C R +A+++ + E C PD S++ L+ LC G +A
Sbjct: 142 LRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201
Query: 179 EELYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++L M++ G +P+ Y ++D F+ V+ F++MV G+ P+L YN +V
Sbjct: 202 DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVV 261
Query: 237 GKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEI 285
L + +D+A++F MV K++ ++ +Y ++ S G+ E + +
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 311
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 28/200 (14%)
Query: 170 CKNGMLAEAEELYGEMSDKG-----VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
C++G A A L+ + + ++P +TY +LMD C +R + +F +++ +G
Sbjct: 83 CRSGP-ALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTG 141
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASYKFMMKALSDGGK- 278
LR N+ + N L+ + DEA DI++ + D SY ++K+L D GK
Sbjct: 142 LRVNIIIANHLLEGFCEAKRTDEA---LDILLHRTPELGCVPDVFSYSILLKSLCDQGKS 198
Query: 279 --LDEILEIV---GGILDDGGIEFSEELQEFVK-------GELSKEGREEEVVK-LMEKK 325
D++L ++ G + + ++ + F K +L KE + + L+
Sbjct: 199 GQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYN 258
Query: 326 EREKAEAKAREAEAAEAAKR 345
A KAR + AEA R
Sbjct: 259 SVVHALCKARAMDKAEAFLR 278
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 136/275 (49%), Gaps = 10/275 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
AD V+YS ++ + D LF E+ K G+ D Y SL+ G +A
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK--GIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
++ + + + V NS++DA GK EA KLFD M P N+ ++
Sbjct: 296 RLLSDML--ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP-----NIVTY 348
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + +G+C R +A ++F M C PD +++N LI+ CK + + EL+ +MS
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G+ + TY L+ F+ + D+ F++MV G+ PN+ YN L+ L + G L++
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468
Query: 248 AKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDE 281
A F+ + K K++ D +Y M + + GK+++
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 145/312 (46%), Gaps = 46/312 (14%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D YS L+ G RL ++ E+ + + V + SL+ + +G
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER--KINPNVVTFNSLIDAFAKEGKL 326
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA + ++E + S+ + V NS+++ C + + DEA ++F M ++ P +
Sbjct: 327 IEAEKLFDEMI--QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP-----D 379
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKM-----------------GEYRCS---------- 156
+ ++N + +G+C + D +E+FR M G ++ S
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 157 --------PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
P+ +++N L+D LCKNG L +A ++ + + PD YTY ++ + +
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYK 267
+V+DG F + G++P++ YN ++ + G+ +EA + F M + + D+ +Y
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559
Query: 268 FMMKA-LSDGGK 278
+++A L DG K
Sbjct: 560 TLIRAHLRDGDK 571
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 112/239 (46%), Gaps = 8/239 (3%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
V SL+ G+ EA+ ++ V + V +++ L + K EA+ L
Sbjct: 136 VTLNSLLNGFCHGNRISEAVALVDQMV--EMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
+RM + P +L ++ + +G C +G A+ + KM + + D + ++ +ID
Sbjct: 194 ERMVVKGCQP-----DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
LCK + +A L+ EM +KG+ PD +TY L+ R D + M++ + P
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
N+ +N L+ + G L EA+ FD M+++ + + +Y ++ +LDE +I
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 35/243 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + D V Y+ L+ GF + LF ++ + G+V + V Y +L+ G+F
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR--GLVGNTVTYTTLIHGFFQA 428
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ A + + V + V + + N++LD LC NGK ++A+ +F+ ++ P
Sbjct: 429 SDCDNAQMVFKQMVSD--GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 121 AVNLGS------------------------------FNVMADGYCGQGRFKDAIEVFRKM 150
N+ S +N M G+C +G ++A +F KM
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E PD+ ++N LI ++G A + EL EM D TYGL+ D + R+
Sbjct: 547 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD-GRL 605
Query: 211 DDG 213
D G
Sbjct: 606 DKG 608
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 129/293 (44%), Gaps = 20/293 (6%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA++ + E V S S V + +L A+ KFD + ++M+ ++ N
Sbjct: 47 DEAVDLFGEMV--KSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKME-----ILGVSHN 99
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L ++N+M + C + + A+ + KM + P ++ N+L++ C ++EA L
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M + G PD T+ L+ F+ N+ + +MV G +P+L Y ++ L + G
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 244 MLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
D A + + M K K++ D Y ++ +L +D+ L + +D+ GI
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE-MDNKGIRPDVFTY 278
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREK-----------AEAKAREAEAAEAAK 344
+ L GR + +L+ K +A A+E + EA K
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 132/271 (48%), Gaps = 10/271 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D V +S LM F R+ D F ++K+ G+V D V+Y LM GY
Sbjct: 97 MLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKK--FGLVPDNVIYTVLMHGYCRN 154
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA++ +E + E V + +A N++L+ LC +A KLFD M P
Sbjct: 155 GNMLEALKIRDEML-EQGCV-LDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALP--- 209
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +F + G+C G A+ +F M + PD +++N LID CK G + +A E
Sbjct: 210 --DFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 267
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M + + P+ TYG+L++A V V + + M++ G++P L N ++
Sbjct: 268 LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 327
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ G +A F M+ K + D SY ++
Sbjct: 328 RSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 121/253 (47%), Gaps = 8/253 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ D Y +L+ + EA E + E + + V V+ +S++ N D
Sbjct: 66 GLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQ--GVVPDLVSFSSLMAVFSRNRHLD 123
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+AL F MK P + + V+ GYC G +A+++ +M E C D ++
Sbjct: 124 QALVYFRDMKKFGLVPDNVI-----YTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA 178
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+N +++ LCK ML +A++L+ EM ++G PD YT+ L+ + + + F M
Sbjct: 179 YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMT 238
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLD 280
++P++ YN L+ +VG +++A +D M+ +K+ + +Y ++ A G +
Sbjct: 239 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVS 298
Query: 281 EILEIVGGILDDG 293
E + +++ G
Sbjct: 299 EAFRLWDVMIEKG 311
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 15/209 (7%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
V N+++ A C G +EA ++ + M + K L +L ++N + +G C +GR+ A
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMAD-----KGLKPSLFTYNAIINGLCKKGRYARAK 56
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
+ +M SPDT ++N L+ + C+ +EA+E++GEM +GV PD ++ LM A
Sbjct: 57 GILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLM-AV 115
Query: 205 FEVNR-VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
F NR +D YFR M GL P+ +Y L+ + G + EA D M+++ +D
Sbjct: 116 FSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLD 175
Query: 263 DASYKFMM------KALSDGGKL-DEILE 284
+Y ++ K L+D KL DE++E
Sbjct: 176 VIAYNTILNGLCKEKMLTDADKLFDEMVE 204
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D + Y+ ++ G ++ +LF+E+ E+ G + D + +L+ G+
Sbjct: 167 MLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER--GALPDFYTFTTLIHGHCQD 224
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A+ + N +K VA N+++D C G+ ++A +L+D M + P +
Sbjct: 225 GNMTKALSLFGTMTQRN--IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHI 282
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + YC G +A ++ M E P ++ N +I C++G ++A+E
Sbjct: 283 -----TYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADE 337
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
G M KGV PD +Y L++
Sbjct: 338 FLGRMIAKGVAPDHISYNTLIN 359
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 8/241 (3%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
V Y +L+ Y +G+ EEA E N + +K S N++++ LC G++ A +
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMA--DKGLKPSLFTYNAIINGLCKKGRYARAKGIL 59
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
M N P + ++N + C + F +A E+F +M PD +SF++L+
Sbjct: 60 IEMLNIGLSP-----DTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMA 114
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
+N L +A + +M G+ PD Y +LM + + +M++ G
Sbjct: 115 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 174
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIV 286
++ YN ++ L + ML +A FD MV++ + D ++ ++ G + + L +
Sbjct: 175 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 234
Query: 287 G 287
G
Sbjct: 235 G 235
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 138/282 (48%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KGF AD ++Y+ L+ GF G D +L ++ ++ + D V + +L+ + +
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR--KITPDVVAFSALIDCFVKE 330
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA E + E + + V S++D C + D+A + D M ++ P
Sbjct: 331 GKLREAEELHKEMI--QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP--- 385
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +FN++ +GYC D +E+FRKM DT+++N LI C+ G L A+E
Sbjct: 386 --NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM + V PD +Y +L+D + + F K+ S + ++ +YN ++ +
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+D+A F + +K +K D +Y M+ L G L E
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 142/311 (45%), Gaps = 45/311 (14%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ + L+ G +G L + + E G + V YG ++K G AME
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVET--GFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ E +K+ AV + ++D LC +G D A LF+ M+ K ++ + +
Sbjct: 236 RKM--EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME-----IKGFKADIIIYTTL 288
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G+C GR+ D ++ R M + + +PD ++F+ LID K G L EAEEL+ EM +G+
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 191 NPDEYTYGLLMDA-CFE----------------------------------VNRVDDGAT 215
+PD TY L+D C E N +DDG
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALS 274
FRKM G+ + YN L+ ++G L+ AK F MV ++++ D SYK ++ L
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 275 DGGKLDEILEI 285
D G+ ++ LEI
Sbjct: 469 DNGEPEKALEI 479
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G VAD V Y+ L+ GF G + LF+E+ + V D V Y L+ G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR--RVRPDIVSYKILLDGLCDN 470
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A+E + + E S +++ N ++ +CN K D+A LF + P K +
Sbjct: 471 GEPEKALEIFEKI--EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-----PLKGV 523
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N+M G C +G +A +FRKM E SP+ ++N LI G ++ +
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK 583
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L E+ G + D T +++D
Sbjct: 584 LIEEIKRCGFSVDASTVKMVVD 605
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+F+ + +G C +GR +A+E+ +M E P ++ N L++ LC NG +++A L M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ G P+E TYG ++ + + RKM + ++ + Y+ ++ L + G L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 246 DEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
D A + F+ M +K K D Y +++ G+ D+
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 11/241 (4%)
Query: 44 VSDG---VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF 100
VSDG V Y ++ + E++A++ + E S + + + + + ++
Sbjct: 31 VSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMT--RSRPRPRLIDFSRLFSVVARTKQY 88
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
D L L +M+ K +A NL + ++M + C + A K+ + PDT+
Sbjct: 89 DLVLDLCKQME-----LKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTV 143
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+F+ LI+ LC G ++EA EL M + G P T L++ +V D +M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKL 279
V++G +PN Y ++ + + G A M +K+K+D Y ++ L G L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 280 D 280
D
Sbjct: 264 D 264
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 10/328 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ +ML R + D +F E+ EK G+ + Y L+ G+F E
Sbjct: 478 KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK--GLQPNNFTYSILIDGFFKNQDE 535
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A E N+ + N + + V N++++ LC G+ +A ++ + E KR ++
Sbjct: 536 QNAWEVINQMIASN--FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE----KRYSMG 589
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N + DG+ +G A+E +R+M E SP+ ++F +LI+ CK+ + A E+
Sbjct: 590 CTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIH 649
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM K + D YG L+D + N + T F ++++ GL PN++VYN L+ +G
Sbjct: 650 EMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLG 709
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+D A + MV + D +Y M+ L G L ++ +L G + E L
Sbjct: 710 KMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVP-DEILY 768
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKA 330
+ LSK+G+ K++E+ +++ A
Sbjct: 769 VVLVNGLSKKGQFVRASKMLEEMKKKDA 796
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 123/259 (47%), Gaps = 10/259 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ ++ GF ++GD+D + E+ E G+ + V + SL+ G+ + A+E +E
Sbjct: 593 YNSIIDGFFKEGDTDSAVEAYREMSE--NGISPNVVTFTSLINGFCKSNRMDLALEMIHE 650
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
++ +K+ A +++D C A LF + L N+ +N +
Sbjct: 651 M--KSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLE-----LGLMPNVSVYNNLIS 703
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G+ G+ AI++++KM S D ++ +ID L K+G L A +LY E+ G+ P
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVP 763
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
DE Y +L++ + + + +M PN+ +Y+ ++ + G L+EA
Sbjct: 764 DEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVH 823
Query: 253 DIMVKK-LKMDDASYKFMM 270
D M++K L DD + ++
Sbjct: 824 DEMLEKGLVHDDTIFNLLV 842
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 128/319 (40%), Gaps = 69/319 (21%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
L E++EK GGV + Y S++ +G EEA++ +E VG + MS +A S++
Sbjct: 296 LLREMREK-GGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVG--FGIPMSVIAATSLI 352
Query: 92 DALCN-----------------------------------NGKFDEALKLFDRMKNEHNP 116
CN N + ++A++++ RMK+
Sbjct: 353 TGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIA 412
Query: 117 PKRLAVN---------------LGSFN-----VMADGY---------CGQGRFKDAIEVF 147
P + V+ L FN +A G+ C QG+ A
Sbjct: 413 PSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFL 472
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
R M P+ + +NN++ C+ + A ++ EM +KG+ P+ +TY +L+D F+
Sbjct: 473 RMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKN 532
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV--KKLKMDDAS 265
+ +M+ S N +YN ++ L +VG +AK ++ K+ M S
Sbjct: 533 QDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTS 592
Query: 266 YKFMMKALSDGGKLDEILE 284
Y ++ G D +E
Sbjct: 593 YNSIIDGFFKEGDTDSAVE 611
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 144/364 (39%), Gaps = 44/364 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G D V LM +R+ + ++F + + G DG+++ ++
Sbjct: 230 MVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSR--GAEPDGLLFSLAVQAACKM 287
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
A++ E + E V S SV+ A G +EA+K+ D M P +
Sbjct: 288 KDLVMALDLLRE-MREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVI 346
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A + G+C A++ F +M E +PD + F+ +I+ CKN + +A E
Sbjct: 347 AA-----TSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVE 401
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVN-------------------------------- 208
+Y M G+ P ++ C +
Sbjct: 402 IYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCK 461
Query: 209 --RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDAS 265
+VD ++ R M + G+ PN+ YN ++ ++ +D A+S F M++K L+ ++ +
Sbjct: 462 QGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFT 521
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKK 325
Y ++ E++ ++ E +E + + L K G+ + ++++
Sbjct: 522 YSILIDGFFKNQDEQNAWEVINQMI-ASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Query: 326 EREK 329
+EK
Sbjct: 581 IKEK 584
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V ++ L+ GF + D + E+K K + D YG+L+ G+ K +
Sbjct: 620 GISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSK--DLKLDVPAYGALIDGFCKKNDMK 677
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A ++E + E + +V NN ++ N GK D A+ L+ +M N+ ++ +L
Sbjct: 678 TAYTLFSELL-ELGLMPNVSVYNN-LISGFRNLGKMDAAIDLYKKMVNDG-----ISCDL 730
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ M DG G A +++ ++ PD + + L++ L K G A ++ E
Sbjct: 731 FTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEE 790
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M K P+ Y ++ +++ +M++ GL + ++N LV V+
Sbjct: 791 MKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGRVE 847
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 118 KRLAVNLGS--FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
KR L S FN + + Y R A++ F M + P NN++ L ++ ++
Sbjct: 161 KRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLI 220
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
EA+E+Y +M GV D T LLM A + ++ FR+++ G P+
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPD 273
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 120/272 (44%), Gaps = 17/272 (6%)
Query: 50 YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR 109
+ L+ Y + A++C+N V N + V N+VL +L + DEA +++++
Sbjct: 172 FNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYV--NNVLSSLVRSNLIDEAKEIYNK 229
Query: 110 MKNEHNPPKRLAVNLGSFNV----MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
M + + + NV + + + ++A+++FR++ PD L F+
Sbjct: 230 M---------VLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLA 280
Query: 166 IDQLCKNGMLAEAEELYGEMSDK-GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+ CK L A +L EM +K GV + TY ++ AC + +++ +MV G
Sbjct: 281 VQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFG 340
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
+ ++ L+ L +A FF+ M ++ L D + M++ ++++ +
Sbjct: 341 IPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAV 400
Query: 284 EIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
EI + G S + + ++G L E E
Sbjct: 401 EIYKRMKSVGIAPSSVLVHKMIQGCLKAESPE 432
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 130/254 (51%), Gaps = 9/254 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V +S L+ F G D E+K G+V DGV+Y ++ G+ G
Sbjct: 291 RGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGL--GLVPDGVIYTMVIGGFCRAGSM 348
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA+ +E VG + V N++L+ LC + +A +L + MK P +
Sbjct: 349 SEALRVRDEMVGLGCLPDV--VTYNTLLNGLCKQHRLLDAEELLNEMKERGVTP-----D 401
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +F + GYC G F+ A+++F + R PD +++N+LID +C+ G LA+A EL+
Sbjct: 402 LCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWD 461
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M + + P+ TY +L+D+ E +V++ + +MV G PN+ YN ++ + G
Sbjct: 462 DMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSG 521
Query: 244 MLDEAKSFFDIMVK 257
+ + + F M++
Sbjct: 522 NVKKGQQFLQKMMQ 535
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 12/279 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGME 63
G V D V+Y+ ++ GF R G R+ +E+ +G G + D V Y +L+ G +
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM---VGLGCLPDVVTYNTLLNGLCKQHRL 383
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A E NE + V +++ C +G F++AL+LFD + ++ RL +
Sbjct: 384 LDAEELLNEM--KERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQ-----RLRPD 436
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + DG C +G A E++ M P+ ++++ LID C+ G + EA
Sbjct: 437 VVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLD 496
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KG P+ TY ++ V G + +KM+ + P+L +N L+ ++
Sbjct: 497 EMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEE 556
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDE 281
+ A + F+IM K++ DA +Y ++ S+ G ++E
Sbjct: 557 NMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEE 595
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 96/205 (46%), Gaps = 6/205 (2%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E V V +N ++DA G D A+ L D M N K L + +FN + G C
Sbjct: 184 EKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMAN-----KGLKPGIVTFNSVLKGLC 238
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
RF A EVFR M + +PD SFN LI C+ G + EA + Y EM +GV PD
Sbjct: 239 KHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVV 298
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
++ L+ ++D A Y R+M GL P+ +Y ++G + G + EA D M
Sbjct: 299 SFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM 358
Query: 256 VKKLKMDD-ASYKFMMKALSDGGKL 279
V + D +Y ++ L +L
Sbjct: 359 VGLGCLPDVVTYNTLLNGLCKQHRL 383
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 120/255 (47%), Gaps = 9/255 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D ++ L+ G+ RDG+ + +LF+ L + + D V Y SL+ G KG
Sbjct: 396 RGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQ--RLRPDVVAYNSLIDGMCRKGDL 453
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A E +++ + + V + ++D+ C G+ +EA D M ++ N P N
Sbjct: 454 AKANELWDDM--HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLP-----N 506
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + GYC G K + +KM + PD ++FN LI K + A ++
Sbjct: 507 IMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFN 566
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + V PD TY ++++ E +++ F+KM SG+ P+ Y L+ V G
Sbjct: 567 IMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAG 626
Query: 244 MLDEAKSFFDIMVKK 258
EA D M+ +
Sbjct: 627 NSKEAFQLHDEMMHR 641
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 8/181 (4%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-PDTLSFNNLIDQLCKNGMLAEAEE 180
VN + N+M YC F A V +M E RC PD ++ N LID + G + A
Sbjct: 155 VNAYTLNIMVHSYCKSLEFDKADTVISEM-EKRCVFPDVVTHNVLIDARFRAGDVDAAIA 213
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M++KG+ P T+ ++ + R D FR M + P++ +N L+G
Sbjct: 214 LVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFC 273
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE----ILEIVG-GILDDGG 294
+VG ++EA F+ M ++ + D S+ ++ S GK+D + E+ G G++ DG
Sbjct: 274 RVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGV 333
Query: 295 I 295
I
Sbjct: 334 I 334
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 9/194 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + V YS L+ G + F +E+ K G + + + Y S++KGY
Sbjct: 463 MHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSK--GNLPNIMTYNSIIKGYCRS 520
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++ + + + +N + + N+++ A +F+ M+ E P +
Sbjct: 521 GNVKKGQQFLQKMMQDN--ILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAV 578
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N++ +G+ QG ++A VF+KMG PD ++ +LI+ G EA +
Sbjct: 579 -----TYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQ 633
Query: 181 LYGEMSDKGVNPDE 194
L+ EM +G PD+
Sbjct: 634 LHDEMMHRGFAPDD 647
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 160/346 (46%), Gaps = 22/346 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D V +S L+ F R+ D F ++K+ G+V D V+Y LM GY
Sbjct: 249 MLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK--FGLVPDNVIYTVLMHGYCRN 306
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA++ +E + E V + +A N++L+ LC +A KLFD M P
Sbjct: 307 GNMLEALKIRDEML-EQGCV-LDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALP--- 361
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +F + G+C G A+ +F M + PD +++N LID CK G + +A E
Sbjct: 362 --DFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 419
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M + + P+ TYG+L++A V V + + M++ G++P L N ++
Sbjct: 420 LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 479
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVG-----GILDDGG 294
+ G +A F M+ K + D SY ++ +D+ + G+L D
Sbjct: 480 RSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPD-I 538
Query: 295 IEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAA 340
I ++ + F ++GR +E +L+ +K EK R A
Sbjct: 539 ITYNVVMNGF-----CRQGRMQE-AELVLRKMIEKGINPDRSTYTA 578
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 135/282 (47%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D + Y+ ++ G ++ +LF+E+ E+ G + D + +L+ G+
Sbjct: 319 MLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER--GALPDFYTFTTLIHGHCQD 376
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A+ + N +K VA N+++D C G+ ++A +L+D M + P +
Sbjct: 377 GNMTKALSLFGTMTQRN--IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHI 434
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + YC G +A ++ M E P ++ N +I C++G ++A+E
Sbjct: 435 -----TYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADE 489
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
G M KGV PD +Y L++ + +D + KM GL P++ YN ++
Sbjct: 490 FLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFC 549
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ G + EA+ M++K + D ++Y ++ L+E
Sbjct: 550 RQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNE 591
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 121/253 (47%), Gaps = 8/253 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ D Y +L+ + EA E + E + + V V+ +S++ N D
Sbjct: 218 GLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQ--GVVPDLVSFSSLIAVFSRNRHLD 275
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+AL F MK P + + V+ GYC G +A+++ +M E C D ++
Sbjct: 276 QALVYFRDMKKFGLVPDNVI-----YTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA 330
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+N +++ LCK ML +A++L+ EM ++G PD YT+ L+ + + + F M
Sbjct: 331 YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMT 390
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLD 280
++P++ YN L+ +VG +++A +D M+ +K+ + +Y ++ A G +
Sbjct: 391 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVS 450
Query: 281 EILEIVGGILDDG 293
E + +++ G
Sbjct: 451 EAFRLWDVMIEKG 463
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 114/218 (52%), Gaps = 15/218 (6%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E + + V N+++ A C G +EA ++ + M ++ P +L ++N + +G C
Sbjct: 145 EGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKP-----SLFTYNAIINGLC 199
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+GR+ A + +M SPDT ++N L+ + C+ +EA+E++GEM +GV PD
Sbjct: 200 KKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLV 259
Query: 196 TYGLLMDACFEVNR-VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ L+ A F NR +D YFR M GL P+ +Y L+ + G + EA D
Sbjct: 260 SFSSLI-AVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDE 318
Query: 255 MVKK-LKMDDASYKFMM------KALSDGGKL-DEILE 284
M+++ +D +Y ++ K L+D KL DE++E
Sbjct: 319 MLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE 356
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 104/220 (47%), Gaps = 9/220 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y+ L+ GF + G+ + L++ + + + + + YG L+ Y G EA
Sbjct: 397 DIVAYNTLIDGFCKVGEMEKASELWDGMISR--KIFPNHITYGILINAYCSVGHVSEAFR 454
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
++ + +K + V N+V+ C +G +A + RM + P + S+N
Sbjct: 455 LWDVMI--EKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHI-----SYN 507
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ +G+ + A KM + PD +++N +++ C+ G + EAE + +M +K
Sbjct: 508 TLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEK 567
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
G+NPD TY L++ + +++ + +M+ G P+
Sbjct: 568 GINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ +N+ + N+M + C G+F D +M D +++N LI C+ G+L EA
Sbjct: 114 IELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAF 173
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
E+ M+DKG+ P +TY +++ + R +M++ GL P+ YN L+ +
Sbjct: 174 EIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVES 233
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
+ EAK F M+++ + D S+ ++ S LD+ L
Sbjct: 234 CRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + + Y L+ + G FRL++ + EK G+ V +++KGY
Sbjct: 424 MISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEK--GIKPTLVTCNTVIKGYCRS 481
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A E + + V ++ N++++ D+A ++M+ E P
Sbjct: 482 GDSSKADEFLGRMIAK--GVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLP--- 536
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++NV+ +G+C QGR ++A V RKM E +PD ++ LI+ L EA
Sbjct: 537 --DIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFR 594
Query: 181 LYGEMSDKGVNPDE 194
+ EM +G PD+
Sbjct: 595 FHDEMLQRGFAPDD 608
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C + L F+ LI + L E E + + KG L+ +++ V+
Sbjct: 44 CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAW 103
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
R++V SG+ N+ N +V L + G D+ KSF M + D +Y ++ A
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163
Query: 274 SDGGKLDEILEIVGGILDDG 293
G L+E EI+ + D G
Sbjct: 164 CREGLLEEAFEIMNSMADKG 183
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 149/327 (45%), Gaps = 16/327 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D + Y+ L+ GF + D L E+ + G D V Y +++ G
Sbjct: 170 MVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRR--GFTPDIVTYSTVIDGLCKA 227
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A++ + E S +A+ NS++ C G DEA++L +M ++ P
Sbjct: 228 GRLRDAVDIFEEM-----SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAP--- 279
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + +C GR DA E+F++M + SPD ++F +L+D LC G + +A E
Sbjct: 280 --DVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 337
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L E++ +G P YTY ++D + N+V G PN YN LV
Sbjct: 338 LLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 397
Query: 241 QVGMLDEAKSFFDIMVKK---LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
+ G D+A + D + + A Y ++ AL G+ D+ ++ ++ G +
Sbjct: 398 RAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPA 457
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEK 324
+ V L K + ++ +L+E+
Sbjct: 458 AATFATVVFA-LCKAHQPQQAHELLEE 483
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF D V YS ++ G + G +FEE+ + Y SL+ GY G
Sbjct: 208 RGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS-----CAPTAITYNSLIGGYCRAGDM 262
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA+ + V + + + V +++ A C G+ D+A +LF +M +L+ +
Sbjct: 263 DEAIRLLGKMVDDKCAPDV--VTYTTLMSAFCKMGRLDDAYELFQQMVA-----NKLSPD 315
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +F + DG CG+GR +DA+E+ ++ C P ++N ++D CK + +AEEL
Sbjct: 316 VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVA 375
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVD-------------------------------- 211
+ +G P+ TY +L+ C R D
Sbjct: 376 DFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCR 435
Query: 212 -----DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
D ++ +M+ G P A + +V L + +A + M+K
Sbjct: 436 DGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 486
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 12/241 (4%)
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
+N V+ LC G+ AL ++ +M + H PP L ++ + G R +DA++V
Sbjct: 8 HNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFL-----TYTKLVHGLSKARRLRDAVQV 61
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
++M R PD + ++ LC + +A EL EM +G+ + TY L+D +
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDAS 265
R+D+ M + G P + YN ++ + +DEA F + MV + D +
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKGELSKEGREEEVVKLME 323
Y ++ + LE++G + G F+ ++ + V L K GR + V + E
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRG---FTPDIVTYSTVIDGLCKAGRLRDAVDIFE 238
Query: 324 K 324
+
Sbjct: 239 E 239
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 146/361 (40%), Gaps = 64/361 (17%)
Query: 11 VVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
++++ ++ G R G + GV+R + D + Y L+ G +A+
Sbjct: 6 LLHNVVIGGLCRAGRLRHALGVYRQMNDAHPP------DFLTYTKLVHGLSKARRLRDAV 59
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E V + + V+ +LC + D+A +L + M + + +A N ++
Sbjct: 60 QVLQEMVSARHVPDNTTL--TVVVQSLCLGDRVDDARELVEEMLH-----RGMAANAITY 112
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE-------- 179
+ + DG C R +A+ + M E C+P +++N++I C+ + EA
Sbjct: 113 SALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVA 172
Query: 180 ---------------------------ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
EL GE++ +G PD TY ++D + R+ D
Sbjct: 173 EGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRD 232
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMK 271
F +M P YN L+G + G +DEA MV K D +Y +M
Sbjct: 233 AVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMS 289
Query: 272 ALSDGGKLDEILEI----VGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
A G+LD+ E+ V L + F+ V G L EGR E+ ++L+E+ R
Sbjct: 290 AFCKMGRLDDAYELFQQMVANKLSPDVVTFT----SLVDG-LCGEGRMEDALELLEEITR 344
Query: 328 E 328
Sbjct: 345 R 345
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 40/218 (18%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEEL-KEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V Y+ LM F + G D + LF+++ KL D V + SL+ G +G E+A+
Sbjct: 280 DVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLS---PDVVTFTSLVDGLCGEGRMEDAL 336
Query: 68 E------------------CYNEAVGENSSVKMS---------------AVANNSVLDAL 94
E C + + + V+ + V N ++
Sbjct: 337 ELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGC 396
Query: 95 CNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
C G+ D+AL+ D++ +E P ++ + ++ D C GR DA++ + +M +
Sbjct: 397 CRAGRTDQALQYLDQLNSEGGP---CPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRG 453
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
P +F ++ LCK +A EL EM G P
Sbjct: 454 YVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTP 491
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+P TL N +I LC+ G L A +Y +M+D PD TY L+ + R+ D
Sbjct: 2 NPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQ 60
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
++MV + P+ +V L +D+A+ + M+ + + + +Y ++ L
Sbjct: 61 VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+LDE + +V + + G + G + R +E ME+
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITG-FCRARRVDEAHGFMEQ 169
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 151/318 (47%), Gaps = 16/318 (5%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+P V SY ++ G+ G D RL + + D Y +L++G +G +
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME-----PDTYTYNTLIRGLCGRGRTDN 170
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A+ ++ + + V +L+A C + +A+KL D M++ K A ++
Sbjct: 171 ALAVLDDMLRRGCVPDV--VTYTILLEATCKRSGYKQAVKLLDEMRD-----KGCAPDIV 223
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++NV+ +G C +GR DA+E + + Y C P+T+S+N ++ LC +AE+L EM
Sbjct: 224 TYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 283
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
S KG P+ T+ +L+ V+ ++ G PN YN ++ + +
Sbjct: 284 SRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKM 343
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
D A +F ++MV D SY ++ AL GG++D +E++ + D G
Sbjct: 344 DRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTV 403
Query: 305 VKGELSKEGREEEVVKLM 322
+ G L+K G+ EE ++L+
Sbjct: 404 IDG-LTKAGKTEEALELL 420
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 132/292 (45%), Gaps = 10/292 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ ++ G + +L E+ K G + V + L+ +G+ E
Sbjct: 252 GCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRK--GRPPNVVTFNMLISFLCRRGLVE 309
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
AME ++ ++++ N +L A C K D A+ + M + P ++
Sbjct: 310 PAMEILDQI--PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYP-----DI 362
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S+N + C G A+E+ ++ + C+P +S+N +ID L K G EA EL E
Sbjct: 363 VSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNE 422
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG+ PD TY + R+++ F K+ D G+RPN +YN ++ L +
Sbjct: 423 MVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRA 482
Query: 245 LDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
A F MV M ++++Y +++ L+ G + E E++ + G +
Sbjct: 483 THSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVV 534
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 9/190 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V Y+ L+ R G+ D L +LK+K G + Y +++ G
Sbjct: 353 MVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK--GCTPVLISYNTVIDGLTKA 410
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA+E NE V ++ + +++ LC G+ +EA+K F ++++ P
Sbjct: 411 GKTEEALELLNEMV--TKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRP--- 465
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +N + G C + AI++F M C P+ ++ LI+ L G++ EA E
Sbjct: 466 --NTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEARE 523
Query: 181 LYGEMSDKGV 190
+ E+ +GV
Sbjct: 524 MMAELCSRGV 533
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 101/260 (38%), Gaps = 17/260 (6%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y AV N+ SA A+N L L G +EA++L + M G
Sbjct: 43 YAGAVAPNAVPHRSA-ASNDRLRVLVRRGDLEEAIRLVESMAGLE------PSAAGPCAA 95
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ C GR +A V C PD +S+N ++ C G L A L M
Sbjct: 96 LIKKLCASGRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP--- 147
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ PD YTY L+ R D+ M+ G P++ Y L+ + +A
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGE 308
D M K D +Y ++ + G++D+ +E + + G + +KG
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267
Query: 309 LSKEGREEEVVKLMEKKERE 328
+ E R E+ KLM + R+
Sbjct: 268 CTAE-RWEDAEKLMAEMSRK 286
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 139/275 (50%), Gaps = 13/275 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGM 62
KGF D Y L+ GF +DGD D +F K+ LG G+ V+Y +L+KG +G+
Sbjct: 324 KGFKPDEFTYCSLINGFCKDGDPDRAMAVF---KDGLGKGLRPSIVLYNTLIKGLSQQGL 380
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
A++ NE + EN + + N V++ LC G +A L D + PP
Sbjct: 381 ILPALQLMNE-MAENGCLP-NIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPP----- 433
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ ++N + DGYC Q + A E+ +M +PD +++N L++ LCK G E E++
Sbjct: 434 DIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIF 493
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M +KG P+ TY +++D+ + +V++ +M GL+P++ + L ++
Sbjct: 494 KAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKI 553
Query: 243 GMLDEAKSFFDIMVKKLKM--DDASYKFMMKALSD 275
G +D A F M K+ + A+Y ++ A S+
Sbjct: 554 GDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSE 588
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 154/368 (41%), Gaps = 55/368 (14%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G +D Y+ + F + RL + E G S+ V Y +++ G + G
Sbjct: 140 RGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPEL--GCDSNAVAYCTVVAGLYDSGEH 197
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A E ++E + + VA N ++ LC G E+ +L ++ P N
Sbjct: 198 DHARELFDEMLAR--CLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCP-----N 250
Query: 124 LGSFNVMADGYCGQG---------RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
L +FN+ G C +G R +A E RKM PD L++N++ID CK GM
Sbjct: 251 LFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGM 310
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+ +A + + KG PDE+TY L++ + D F+ + GLRP++ +YN
Sbjct: 311 VQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNT 370
Query: 235 LVGKLVQVGMLDEAKSF---------------FDIMVKKL-KM----------DDASYK- 267
L+ L Q G++ A +++++ L KM DDA K
Sbjct: 371 LIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKG 430
Query: 268 -----FMMKALSDGG----KLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
F L DG KLD E+V + G + G L K G+ EEV
Sbjct: 431 CPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNG-LCKAGKSEEV 489
Query: 319 VKLMEKKE 326
+++ + E
Sbjct: 490 MEIFKAME 497
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 18/260 (6%)
Query: 4 KGFVADPVVYSYLMLGFVR----DGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
KG D Y+ L+ G+ + D ++ V R++ + G+ D + Y +L+ G
Sbjct: 429 KGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQ------GMTPDVITYNTLLNGLCK 482
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G EE ME + E + + N ++D+LC K +EA+ L MK+ K
Sbjct: 483 AGKSEEVMEIFKAM--EEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKS-----KG 535
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L ++ SF + G+C G A ++FR+M +Y T ++N ++ + + A
Sbjct: 536 LKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMA 595
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+L+ M + G +PD YTY +++D ++ + G + + ++ P+L + R++
Sbjct: 596 MKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNC 655
Query: 239 LVQVGMLDEAKSFFDIMVKK 258
L + EA +M++K
Sbjct: 656 LCVKDKVHEAVGIIHLMLQK 675
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 7/257 (2%)
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+E +N A E+ K +A ++ L ++G+F+E KL M+ N A+
Sbjct: 22 KALEMFNSAKSEDG-FKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNN----ALLE 76
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
G++ Y +G+ ++A++ F +M Y C P S N +++ L + G +A ++Y
Sbjct: 77 GAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMR 136
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M D+GV D YTY + + + + R R M + G N Y +V L G
Sbjct: 137 MRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE 196
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
D A+ FD M+ + L D ++ ++ L G + E ++G +L G
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNI 256
Query: 304 FVKGELSKEGREEEVVK 320
FV+G L +EG + V+
Sbjct: 257 FVQG-LCREGALDRAVR 272
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 102/227 (44%), Gaps = 8/227 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M+ +G D + Y+ L+ G + G S+ V +F+ ++EK G + + Y ++
Sbjct: 461 MWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEK--GCTPNIITYNIIVDSLCKA 518
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA++ E ++ +K V+ ++ C G D A +LF RM+ +++ +
Sbjct: 519 KKVNEAVDLLGEM--KSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYD----V 572
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N++ + Q A+++F M C PD ++ +ID CK G + + +
Sbjct: 573 CHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYK 632
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
E +K P T+G +++ ++V + M+ G+ P
Sbjct: 633 FLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVP 679
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 146/311 (46%), Gaps = 22/311 (7%)
Query: 8 ADPVVYSYLML--GFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
DP Y++ +L ++G ++ GV + + EK D V Y +LM+GY +
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEK-----PDIVTYNALMEGYCSREN 315
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA E +N V ++ + N ++D C DEA+ LF + N K L
Sbjct: 316 VHEARELFNRMVKR--GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN-----KNLVP 368
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ S+N + DG C GR ++ +M PD +++N LID LCK G + EA +
Sbjct: 369 TIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVL 428
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M KGV P+ TY +MD N V+ F +MV SGL P++ YN L+ +
Sbjct: 429 VMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKT 488
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG----IEF 297
M+DEA F M K L D ASY ++ L + G++ + E++ + D G I +
Sbjct: 489 EMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITY 548
Query: 298 SEELQEFVKGE 308
+ L F K +
Sbjct: 549 NILLDAFCKTQ 559
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 139/280 (49%), Gaps = 12/280 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGME 63
G+ + V ++ ++ GF +G +F+ + + L G + D YG+L+ G G
Sbjct: 120 GYQPNLVTFNTIINGFCING---MIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A+ E E SSV+ + V ++++D LC +G +AL L ++ + + ++
Sbjct: 177 KAALHLLQEM--EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGE-----RGILLD 229
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + DG C GR+++ ++ KM PD +FN LID LCK G + EA+ +
Sbjct: 230 AVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLA 289
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
MS +G PD TY LM+ V + F +MV GL P++ YN L+ +
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
M+DEA F ++ K L ASY ++ L + G++ +
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 155/355 (43%), Gaps = 39/355 (10%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y+ LM G+ + LF + ++ G+ D + Y L+ GY M
Sbjct: 294 RGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR--GLEPDVLNYNVLIDGYCKTKMV 351
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------ 117
+EAM + E +N +++ NS++D LCN+G+ KL D M PP
Sbjct: 352 DEAMVLFKELCNKNLVPTIASY--NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409
Query: 118 ------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
K + N+ ++N M DGYC + A ++F +M +
Sbjct: 410 ILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKS 469
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
PD L++N LI+ CK M+ EA L+ EM K + PD +Y L+D + R+
Sbjct: 470 GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHV 529
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKAL 273
+M DSG P++ YN L+ + D+A S F +V+ + D + ++ L
Sbjct: 530 QELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNL 589
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKGELSKEGREEEVVKLMEKKE 326
G KL + + +L G S +Q + + L K+G E + L+ K E
Sbjct: 590 CKGEKLKMAEDALKHLLMHGC---SPNVQTYTILINALCKDGSFGEAMLLLSKME 641
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 121/258 (46%), Gaps = 10/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ +M G+ + + +F + + G+ D + Y L+ GY
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK--SGLEPDILNYNVLINGYCKT 488
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M +EA+ + E +N +++ NS++D LCN G+ +L D M + P +
Sbjct: 489 EMVDEAIVLFKEMRHKNLIPDIASY--NSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVI 546
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N++ D +C F AI +FR++ E PD + + ++D LCK L AE+
Sbjct: 547 -----TYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAED 600
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ G +P+ TY +L++A + + KM D+ P+ + ++G L+
Sbjct: 601 ALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLL 660
Query: 241 QVGMLDEAKSFFDIMVKK 258
Q D+A+ + M+ +
Sbjct: 661 QRNETDKAEKLREEMIAR 678
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 129/277 (46%), Gaps = 11/277 (3%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+ C+N V S + +L A+ G + A+ LF ++++ K ++ +
Sbjct: 37 DDAVTCFNRMVRVFPPPPTSVF--DKLLGAIVRMGHYPTAISLFTQLQS-----KGISPS 89
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +F ++ + Y Q A + + + P+ ++FN +I+ C NGM+ +A +
Sbjct: 90 IATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ +G D++TYG L++ + ++ ++M S ++PNL +Y+ L+ L + G
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+ +A I + + +D +Y ++ G+ E+ +++ ++ + ++ +
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE-NVDPDDYTF 268
Query: 303 EFVKGELSKEGR--EEEVVKLMEKKEREKAEAKAREA 337
+ L KEGR E + V M K EK + A
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 160/341 (46%), Gaps = 54/341 (15%)
Query: 30 FRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS---------- 79
F L+ E+ K G+ D V Y +L+ G+ + G ++A + +N+ + EN +
Sbjct: 232 FDLYSEMVSK--GISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289
Query: 80 -----------------------VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+K NS++D C + ++A +F+ +
Sbjct: 290 DGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVN 349
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P N+ S+++M G+C + +A+ +F++M PD +++N+LID LCK G ++
Sbjct: 350 P-----NIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKIS 404
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
A +L EM D+GV D+ TY ++DA + ++VD KM D G++P++ Y LV
Sbjct: 405 YALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLV 464
Query: 237 GKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
L + G L++A+ F D++VK +D Y M++ G DE L+++ + ++G I
Sbjct: 465 DGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCI 524
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKARE 336
+ E + L +K E +KAE RE
Sbjct: 525 P-------------NAVTYEIIICSLFDKDENDKAEKLLRE 552
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 168/359 (46%), Gaps = 12/359 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G +D V+ S L+ F + G + F + ++ + G + + +L+KG +KG
Sbjct: 102 GITSDLVILSILINCFSQLGQNPLSFSVLAKILKM--GYEPNVITLTTLIKGLCLKGQIH 159
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A++ +++ V ++ V+ ++++ LC G+ AL+L R+ + P N+
Sbjct: 160 QALQFHDKVVA--LGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQP-----NV 212
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+N + D C +A +++ +M SPD +++N LI C G + +A +L+ +
Sbjct: 213 VMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNK 272
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + +NP+ YT+ +L+D + R+ + M+ G++P++ YN L+ + V
Sbjct: 273 MIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKE 332
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+++AK F+ + ++ + + SY M+ K+DE + + + + I
Sbjct: 333 VNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNS 392
Query: 304 FVKGELSKEGREEEVVKLM-EKKEREKAEAKAREAEAAEAAKRSARAAIASLIPSKFGD 361
+ G L K G+ +KL+ E +R K +A ++ + A + +K D
Sbjct: 393 LIDG-LCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKD 450
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 11/220 (5%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+P ++SY ++ GF + D LF+E+ ++ D V Y SL+ G G
Sbjct: 348 VNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMH--CNNIIPDVVTYNSLIDGLCKLGKISY 405
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A++ +E + V + NS+LDALC N + D+A+ L +MK+E P ++
Sbjct: 406 ALKLVDEM--HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP-----DIC 458
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ + DG C GR +DA VF + D + +I C +G+ E+ +L +M
Sbjct: 459 TYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKM 518
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+ G P+ TY +++ + F+ + D R+M+ GL
Sbjct: 519 EENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 124/264 (46%), Gaps = 12/264 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P ++ + ++ V+ V L +++ G+ SD V+ L+ + G +
Sbjct: 70 PSIFQFGKILGSLVKSNHYSTVVSLHRQME--FNGITSDLVILSILINCFSQLGQNPLSF 127
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + + + + +++ LC G+ +AL+ D++ +N S+
Sbjct: 128 SVLAKIL--KMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV-----ALGFHLNKVSY 180
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ +G C G+ A+++ R++ P+ + +N +ID +CK ++ EA +LY EM
Sbjct: 181 GTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS 240
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
KG++PD TY L+ V ++ D F KM+ + PN+ +N LV + L E
Sbjct: 241 KGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKE 300
Query: 248 AKSFFDIMVKK-LKMDDASYKFMM 270
AK+ +M+K+ +K D +Y +M
Sbjct: 301 AKNVLAMMMKQGIKPDVFTYNSLM 324
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 9/239 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ LM + + + +F + ++ GV + Y ++ G+
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQR--GVNPNIHSYSIMIHGFCKI 365
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EAM + E N + V NS++D LC GK ALKL D M + P ++
Sbjct: 366 KKVDEAMNLFKEMHCNN--IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKI 423
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + D C + AI + KM + PD ++ L+D LCKNG L +A
Sbjct: 424 -----TYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARI 478
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
++ ++ KG D Y ++ D+ KM ++G PN Y ++ L
Sbjct: 479 VFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSL 537
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 129/246 (52%), Gaps = 8/246 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+V DGV+Y ++ G+ G+ +A+ +E VG V N++L+ LC +
Sbjct: 11 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVG--CGCLPDVVTYNTLLNGLCKERRLL 68
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A L + M+ PP +L +F + GYC +G+ A+++F M R PD ++
Sbjct: 69 DAEGLLNEMRERGVPP-----DLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+N LID +C+ G L +A +L+ +M + + P+ TY +L+D+ E +V+D + +M+
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLD 280
+ G+ PN+ YN ++ + G + + + F +MV K+ D +Y ++ K+
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243
Query: 281 EILEIV 286
+ +++
Sbjct: 244 DAFKLL 249
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 132/278 (47%), Gaps = 10/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V D V+Y+ ++ GF R G R+ +E+ G + D V Y +L+ G +
Sbjct: 11 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVG--CGCLPDVVTYNTLLNGLCKERRLL 68
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A NE V +++ C GK D+AL+LFD M N+ RL ++
Sbjct: 69 DAEGLLNEM--RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ-----RLRPDI 121
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG C QG A +++ M P+ ++++ LID C+ G + +A E
Sbjct: 122 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 181
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +KG+ P+ TY ++ V G + +KM+ + + P+L YN L+ ++
Sbjct: 182 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 241
Query: 245 LDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDE 281
+ +A ++M K K++ D +Y ++ S G + E
Sbjct: 242 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 279
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
G + D V Y+ L+ G ++ D++G L E++E+ GV D + +L+ GY ++G
Sbjct: 46 GCLPDVVTYNTLLNGLCKERRLLDAEG---LLNEMRER--GVPPDLCTFTTLIHGYCIEG 100
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP---- 117
++A++ ++ + N ++ V N+++D +C G D+A L+D M + P
Sbjct: 101 KLDKALQLFDTML--NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVT 158
Query: 118 --------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
K + N+ ++N + GYC G + +KM
Sbjct: 159 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 218
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN-RV 210
+ SPD +++N LI K + +A +L M + V PD TY +L++ F V+ V
Sbjct: 219 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLING-FSVHGNV 277
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+ F KM G+ P+ Y ++ V G EA D M+++
Sbjct: 278 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 325
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V Y+ L+ G R GD D L++++ + + + V Y L+ + KG E+A
Sbjct: 119 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR--EIFPNHVTYSILIDSHCEKGQVEDAF 176
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+E + N + + + NS++ C +G + K +M +++ +L ++
Sbjct: 177 GFLDEMI--NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM-----VNKVSPDLITY 229
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + GY + + DA ++ M + + PD +++N LI+ +G + EA ++ +M
Sbjct: 230 NTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 289
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
KG+ PD YTY +++ + +M+ G P+
Sbjct: 290 KGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
R+M + PD + + +I C+ G++++A + EM G PD TY L++ +
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDAS 265
R+ D +M + G+ P+L + L+ G LD+A FD M+ ++L+ D +
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 266 YKFMMKALSDGGKLDE 281
Y ++ + G LD+
Sbjct: 124 YNTLIDGMCRQGDLDK 139
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + V YS L+ G + F +E+ K G++ + + Y S++KGY
Sbjct: 147 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK--GILPNIMTYNSIIKGYCRS 204
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + + + + S + + N+++ K +A KL + M+ E P
Sbjct: 205 GNVSKGQKFLQKMMVNKVSPDL--ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP--- 259
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N++ +G+ G ++A +F KM PD ++ ++I+ G EA +
Sbjct: 260 --DVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQ 317
Query: 181 LYGEMSDKGVNPDE 194
L+ EM +G PD+
Sbjct: 318 LHDEMLQRGFAPDD 331
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 138/267 (51%), Gaps = 13/267 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGFV D Y+ L+ G+ D L E+ + VV D + ++ G KG+
Sbjct: 383 KGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQN--NVVLDSTTHNIMICGLCKKGLI 440
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++AM+ ++E +GE+ + + N+++D L G +EA LF +M+ +NP L +
Sbjct: 441 DKAMQVFDE-MGEHGC-HPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLT 498
Query: 124 LG--------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
LG S + DG C G+ A ++ R + E PD +++N LI+ LCK L
Sbjct: 499 LGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNL 558
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
A L+ E+ KG++PDE TYG L+D + +R +D F+ ++ SG P+L +YN +
Sbjct: 559 DGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTM 618
Query: 236 VGKLVQVGMLDEAKS-FFDIMVKKLKM 261
+ L ++ L +A + + D + KK +
Sbjct: 619 MRSLCRMKKLSQAINLWLDYLPKKYNL 645
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 137/295 (46%), Gaps = 11/295 (3%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE-KLGGVVSDGVVYGSLMKGYFMKG 61
+K + P++YS + + + D V +F+ L + + G+ + + +L+ + G
Sbjct: 101 IKRRLRSPLLYSR-AVSVLLASEPDAV-AMFDALADARAAGLPAPSAAFRALVLAHSSAG 158
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
+EA+E ++ + + +A N+V L + G AL L++RM + P
Sbjct: 159 RHQEAVEAFSRM--GDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLP---- 212
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N ++ V+ DG C +G DA+++F +M E PD + L+ LC G + +A L
Sbjct: 213 -NSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRL 271
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M + G PDE TY + + + RVD+ F + D G L Y+ L+ L Q
Sbjct: 272 LCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQ 331
Query: 242 VGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
G DE S++ M+ K + D Y +++ ++ G+ + ++ + D G +
Sbjct: 332 AGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFV 386
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 9/255 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D +Y+ L+ +G + RL +KE G D V Y + G
Sbjct: 240 MLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKEN--GCPPDEVTYTVFLSGLCKA 297
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA + + ++ + + + ++D L G+FDE L + M + P
Sbjct: 298 GRVDEAFHRFE--LLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISP--- 352
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + ++ + GR KDA + +M + PDT +N L+ L G + A+
Sbjct: 353 --DITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQS 410
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM V D T+ +++ + +D F +M + G P + YN L+ L
Sbjct: 411 LMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLY 470
Query: 241 QVGMLDEAKSFFDIM 255
+ GML+EA+ F M
Sbjct: 471 RAGMLEEARMLFHKM 485
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 13/257 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + Y LM G + G + ++F+E+ E+ G+V D +Y L+ +
Sbjct: 205 MVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLER--GIVPDVKIYTVLLSSLCNE 262
Query: 61 GMEEEA--MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G E+A + C ++ EN V L LC G+ DEA F+ +++
Sbjct: 263 GRIEDAGRLLC---SMKENGCPP-DEVTYTVFLSGLCKAGRVDEAFHRFELLQDGG---- 314
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ L ++ + DG GRF + + + +M SPD + LI + + G +A
Sbjct: 315 -FTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDA 373
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
L EM DKG PD + Y L+ A F+V +D + +M+ + + + +N ++
Sbjct: 374 FLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICG 433
Query: 239 LVQVGMLDEAKSFFDIM 255
L + G++D+A FD M
Sbjct: 434 LCKKGLIDKAMQVFDEM 450
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 167/346 (48%), Gaps = 37/346 (10%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G+ + V Y+ L+ G + RLF + +KLG D V YG+L+KG G
Sbjct: 133 RGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM-QKLG-CTPDVVTYGTLIKGLCGTGNI 190
Query: 64 EEAMECYNEAVGENS----SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
A++ + E + + S + K + + N ++D LC G+ DEA +LF+ MK + P
Sbjct: 191 NIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNE 250
Query: 120 -----LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
L ++ +FNV+ D C +G+ +A ++ M E PD +++N+LI+ C G
Sbjct: 251 MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGD 310
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L A EL+ M KG PD +Y +L++ + +V++ + +M+ G RPN+ Y+
Sbjct: 311 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDS 370
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKF---------------MMKALSDGGKL 279
L+ + G +D+AK F +M K + + SY + MK ++
Sbjct: 371 LLKGIFLAGKVDDAKKLFSVM-KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSS 429
Query: 280 DEILEI------VGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
+ LEI + G+ G +E + EL E +LS EG E VV
Sbjct: 430 NFKLEIENLNCLIDGLCKAGKLETAWELFE----KLSNEGHEPNVV 471
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 134/289 (46%), Gaps = 14/289 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V D V Y+ L+ GF GD + LF + K G D + Y L+ GY
Sbjct: 286 MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK--GCEPDVISYNVLINGYSKT 343
Query: 61 GMEEEAMECYNEA--VGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
EEAM+ YNE VG+ +V + +S+L + GK D+A KLF MK
Sbjct: 344 LKVEEAMKLYNEMLLVGKRPNV----ITYDSLLKGIFLAGKVDDAKKLFSVMKAH----- 394
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+A N ++ + DG C +A+++F ++ + + N LID LCK G L A
Sbjct: 395 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETA 454
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EL+ ++S++G P+ TY +++ +VD +KM +G P++ YN L+
Sbjct: 455 WELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG 514
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+ L+E M +K + D + ++ LS K E L ++
Sbjct: 515 FYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 563
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 10/204 (4%)
Query: 134 YCGQGRFK--DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
+C G A+ F M +P SFN+L+ L K ++ LY +M G++
Sbjct: 42 HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
D T +L++ VNR+ +G F ++ G PN+ YN L+ L + EA
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161
Query: 252 FDIMVKKL--KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG---IEFSEELQEF-- 304
F + ++KL D +Y ++K L G ++ L++ +L+D I + +
Sbjct: 162 F-LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNI 220
Query: 305 VKGELSKEGREEEVVKLMEKKERE 328
+ L K GRE+E +L E+ + +
Sbjct: 221 IVDGLCKVGREDEAKQLFEEMKTQ 244
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 92/244 (37%), Gaps = 57/244 (23%)
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFN--------------------------------- 128
AL F M P +L SFN
Sbjct: 52 HALHFFHLMMRSTPTP-----SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCT 106
Query: 129 --VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
++ + C R ++ F + SP+ +++N LI LC ++EA L+ M
Sbjct: 107 LNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQ 166
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS------GLRPNLAVYNRLVGKLV 240
G PD TYG L+ ++ ++M++ +PN+ YN +V L
Sbjct: 167 KLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLC 226
Query: 241 QVGMLDEAKSFFDIMVKK-----------LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
+VG DEAK F+ M + L+ D ++ ++ L GK+ E +++G +
Sbjct: 227 KVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM 286
Query: 290 LDDG 293
++ G
Sbjct: 287 IESG 290
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 159/357 (44%), Gaps = 43/357 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFE-------------------------- 34
M G V D V+Y+ L+ GF G ++ ++
Sbjct: 326 MIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMV 385
Query: 35 -------ELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
EL EK + D V + +++ G KG ++++ EA S ++ +
Sbjct: 386 DKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEA--RTSGKELDEFSY 443
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+S++ LC +G+ D+A+KL++++ + P N +N + +G+C +F DAI V+
Sbjct: 444 SSMISGLCKDGRLDDAVKLYEKISMDSFKP-----NSHIYNALINGFCQASKFSDAIRVY 498
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M E CSP T+++N LI LCK EA EM +KG D TYG L+
Sbjct: 499 SQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRD 558
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMDDAS 265
++D + +++D GL+ ++ ++N L+ L G +DEA M +K + +
Sbjct: 559 KKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVT 618
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
Y +M + G D+ + IL++G + +KG L R E V+L+
Sbjct: 619 YNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKG-LCSCNRTPEGVQLL 674
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 25/292 (8%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+G D + YS LM GFV++ D L +E+ V D V Y +L+ G F G
Sbjct: 187 CRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSY--EVQPDAVCYNALLGGCFRNGE 244
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLA 121
E+AM + + V + + N +LD LC G F EA +++RM N H P
Sbjct: 245 FEKAMRVWEQLV-RDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQP----- 298
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ ++ M G C A V+ +M + PD + +N+L+ C G + EA +
Sbjct: 299 -DMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKF 357
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM-VDSGLRPNLAVYNRLVGKLV 240
+ MS G+ + +Y +++ F+ VD + + D L P++ ++ ++ L
Sbjct: 358 WDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLC 416
Query: 241 QVG-------MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ G +L+EA++ ++D+ SY M+ L G+LD+ +++
Sbjct: 417 EKGFANKSLQILEEART------SGKELDEFSYSSMISGLCKDGRLDDAVKL 462
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 142/349 (40%), Gaps = 80/349 (22%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ ++ GD D LF+ L+ + G+ D + Y +LM G+
Sbjct: 161 TYNIMLRSLCVRGDLDRAVTLFDSLRCR--GLAPDRITYSTLMSGFV------------- 205
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
N + D AL L D M + P + +N +
Sbjct: 206 ------------------------KNNRLDNALYLLDEMPSYEVQPDAVC-----YNALL 236
Query: 132 DGYCGQGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G G F+ A+ V+ ++ + SP+ ++N ++D LCK GM EA +++ M
Sbjct: 237 GGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNH 296
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD TYG ++ VD A + +M+ +GL P++ +YN L+ G + EA
Sbjct: 297 QPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWK 356
Query: 251 FFDIMVKKLKMDDASYKFMMKALSDGGKLD------EILE--------------IVGGIL 290
F+D M + SY M+K L DGG +D E+LE ++ G+
Sbjct: 357 FWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLC 416
Query: 291 DDG----GIEFSE-------ELQEFVKGE----LSKEGREEEVVKLMEK 324
+ G ++ E EL EF L K+GR ++ VKL EK
Sbjct: 417 EKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEK 465
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 123/269 (45%), Gaps = 11/269 (4%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
YS ++ G +DG D +L+E++ + + +Y +L+ G+ +A+ Y++
Sbjct: 443 YSSMISGLCKDGRLDDAVKLYEKIS--MDSFKPNSHIYNALINGFCQASKFSDAIRVYSQ 500
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ S + + N+++ LC K+ EA + F R E K +++ ++ +
Sbjct: 501 MAENDCSP--TTITYNTLIHGLCKAEKYLEASR-FTREMLE----KGCMLDVNTYGSLIR 553
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VN 191
G C + A+ ++ ++ + D + N LI LC G + EA +L EM +K
Sbjct: 554 GLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCC 613
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P+ TY LMD +E D A+ + ++++GL P++ YN + L E
Sbjct: 614 PNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQL 673
Query: 252 FDIMVKKLKMDDA-SYKFMMKALSDGGKL 279
+ M+ + A ++ +++A+ G +
Sbjct: 674 LNEMLASGIIPTAITWNILVRAVIKYGPI 702
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG--SFNVMADGYCGQGRFKDAIEVF 147
VL A D AL F R+ P L N G S N + D + RF DA F
Sbjct: 90 VLSAFSRALMPDAALAAFRRL------PSFLGCNPGVRSHNALLDAFVRARRFSDADAFF 143
Query: 148 RKMGE----YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ R +P+ ++N ++ LC G L A L+ + +G+ PD TY LM
Sbjct: 144 ASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSG 203
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKM 261
+ NR+D+ +M ++P+ YN L+G + G ++A ++ +V+
Sbjct: 204 FVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASP 263
Query: 262 DDASYKFMMKALSDGGKLDE 281
+ A+Y M+ L G E
Sbjct: 264 NLATYNVMLDGLCKLGMFKE 283
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V+++ L+ G G D +L E+KEK + V Y +LM G++ G
Sbjct: 574 KGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEK-NNCCPNVVTYNTLMDGFYETGCF 632
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A + A+ EN V ++ N+ + LC+ + E ++L + M P + N
Sbjct: 633 DKAASLW-MAILENGLVP-DIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWN 690
Query: 124 L 124
+
Sbjct: 691 I 691
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 148/284 (52%), Gaps = 13/284 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG D V Y ++ G + G+ D L ++++ G + +D V+Y +++ G
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK--GKIEADVVIYNTIIDGLCKY 263
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKR 119
++A + +N+ E +K N ++ LCN G++ +A +L D ++ NP
Sbjct: 264 KHMDDAFDLFNKM--ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP--- 318
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR-CSPDTLSFNNLIDQLCKNGMLAEA 178
+L FN + D + +G+ +A +++ +M + + C PD +++N LI CK + E
Sbjct: 319 ---DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E++ EMS +G+ + TY L+ F+ D+ F++MV G+ P++ YN L+
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
L G ++ A F+ M K+ +K+D +Y M++AL GK+++
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 113/240 (47%), Gaps = 9/240 (3%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
V SL+ G+ EA+ ++ V + V +++ L + K EA+ L
Sbjct: 146 VTLNSLLNGFCHGNRISEAVALVDQMV--EMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
+RM + P +L ++ + +G C +G A+ + KM + + D + +N +ID
Sbjct: 204 ERMVVKGCQP-----DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
LCK + +A +L+ +M KG+ PD +TY L+ R D + M++ + P
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM--DDASYKFMMKALSDGGKLDEILEI 285
+L +N L+ V+ G L EA+ +D MVK D +Y ++K +++E +E+
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 20/255 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K D V ++ L+ FV++G +L++E+ K D V Y +L+KG+
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM-VKSKHCFPDVVAYNTLIKGFCKY 369
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF-----DEALKLFDRMKNEHN 115
EE ME + E + + N+V +G F D A +F +M ++
Sbjct: 370 KRVEEGMEVFRE-------MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P ++ ++N++ DG C G + A+ VF M + D +++ +I+ LCK G +
Sbjct: 423 HP-----DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+ +L+ +S KGV P+ TY +M ++ F +M + G PN YN L
Sbjct: 478 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTL 537
Query: 236 VGKLVQVGMLDEAKS 250
+ ++ G DEA S
Sbjct: 538 IRARLRDG--DEAAS 550
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S V + +L A+ KFD + L ++M+N ++ NL ++++ + +C + +
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQN-----LGISHNLYTYSIFINYFCRRSQLSL 128
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ + KM + P ++ N+L++ C ++EA L +M + G PD T+ L+
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 188
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKM 261
F+ N+ + +MV G +P+L Y ++ L + G D A + + M K K++
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 248
Query: 262 DDASYKFMMKALSDGGKLDEILEI 285
D Y ++ L +D+ ++
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDL 272
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 6/197 (3%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ DAI +F M + R P + F+ L+ + K L +M + G++ + YTY
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+ ++ +++ KM+ G P++ N L+ + EA + D MV+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 259 -LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKGELSKEGRE 315
+ D ++ ++ L K E + +V ++ G +L + V L K G
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC---QPDLVTYGAVINGLCKRGEP 231
Query: 316 EEVVKLMEKKEREKAEA 332
+ + L+ K E+ K EA
Sbjct: 232 DLALNLLNKMEKGKIEA 248
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 150/313 (47%), Gaps = 16/313 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V Y+ ++ G R GD+ L +++E+ V +D Y +++
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER--NVKADVFTYSTIIDSLCRD 241
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF-DEALKLFDRMKNEHNPPKR 119
G + A+ + E E +K S V NS++ LC GK+ D AL L D + E P
Sbjct: 242 GCIDAAISLFKEM--ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP--- 296
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ +FNV+ D + +G+ ++A E++++M SP+ +++N L+D C L+EA
Sbjct: 297 ---NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ M +PD T+ L+ V RVDDG FR + GL N Y+ LV
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGI----LDDGG 294
Q G + A+ F MV + D +Y ++ L D GKL++ LEI + +D G
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 295 IEFSEELQEFVKG 307
+ ++ ++ KG
Sbjct: 474 VMYTTIIEGMCKG 486
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 141/283 (49%), Gaps = 21/283 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + V + + ++ L+ FV++G L++E+ + G+ + + Y +LM GY M+
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR--GISPNIITYNTLMDGYCMQ 346
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR- 119
EA + V S + V S++ C + D+ +K+F N KR
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDI--VTFTSLIKGYCMVKRVDDGMKVF------RNISKRG 398
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L N +++++ G+C G+ K A E+F++M + PD +++ L+D LC NG L +A
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
E++ ++ ++ Y +++ + +V+D F + G++PN+ Y ++ L
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518
Query: 240 VQVGMLDEAKSFFDIMVKKLKMD-----DASYKFMMKA-LSDG 276
+ G L EA +I+++K++ D D +Y +++A L DG
Sbjct: 519 CKKGSLSEA----NILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+++ L GK EA+ L DRM P ++ ++N + +G C G A+++
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENGCQP-----DVVTYNSIVNGICRSGDTSLALDLL 216
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
RKM E D +++ +ID LC++G + A L+ EM KG+ TY L+ +
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+ +DGA + MV + PN+ +N L+ V+ G L EA + M+ + + + +Y
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
Query: 267 KFMMKALSDGGKLDE 281
+M +L E
Sbjct: 337 NTLMDGYCMQNRLSE 351
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+FN + G +G+ +A+ + +M E C PD +++N++++ +C++G + A +L +M
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
++ V D +TY ++D+ +D + F++M G++ ++ YN LV L + G
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 246 DEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++ D++ +++ + ++ ++ GKL E E+ ++ G
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 10/203 (4%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+A N+ + N+M + +C + A V K+ + PDT +FN LI L G ++EA
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L M + G PD TY +++ RKM + ++ ++ Y+ ++ L
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE----ILEIVGGILDDGG 294
+ G +D A S F M K +K +Y +++ L GK ++ + ++V +
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 295 IEFSEELQEFVKGELSKEGREEE 317
I F+ L FV KEG+ +E
Sbjct: 299 ITFNVLLDVFV-----KEGKLQE 316
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 143/314 (45%), Gaps = 45/314 (14%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF+ D V Y+ ++ G + G + F E++ + G D V Y +L+ G+ M
Sbjct: 216 RGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNR--GYEPDAVTYAALIDGFMKAKMI 273
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A Y + + S +S V N +LD LC G+ EA F M+ +
Sbjct: 274 PKAHRVYRQML--QSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEE-----RGCVAT 326
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE---- 179
+ +++ + DG+C +G A+E+FR+M + C P+ +S+N +I LC+ G LA+A
Sbjct: 327 VVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFE 386
Query: 180 --------------------------------ELYGEMSDKGVNPDEYTYGLLMDACFEV 207
EL+ M +G +P+ ++Y +LMD
Sbjct: 387 KLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRA 446
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
++ FR+MV G+ P++ V+N L+ L G +DEA F + ++ D SY
Sbjct: 447 GGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYW 506
Query: 268 FMMKALSDGGKLDE 281
++ LS +++E
Sbjct: 507 SLLDGLSRCERMEE 520
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 148/326 (45%), Gaps = 33/326 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEEL--KEKLGGVVSDGVVYGSLMKGYF 58
M G D VY+ L+ G + G + + L++E ++ V D V Y SL+ G
Sbjct: 138 MLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLC 197
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G EA + +++ E + AV S++D LC G+ +E + F M+N P
Sbjct: 198 KAGRILEARQVFDDEAVERGFIP-DAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPD 256
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ ++ + DG+ A V+R+M + T+++N ++D LCK G +AEA
Sbjct: 257 AV-----TYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEA 311
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
+ M ++G TY LMD C E N V FR+M+D G PNL YN ++
Sbjct: 312 YATFLAMEERGCVATVVTYSALMDGFCSEGN-VSAAVELFRRMLDRGCEPNLVSYNIIIR 370
Query: 238 KLVQVGMLDEAKSFFDIMVKKLKMDDASYKF---------MMKALSDGGKLDEILE---- 284
L + G L +A +F+ ++++ D Y F + +SDG +L E +
Sbjct: 371 GLCRAGKLAKAYFYFEKLLQRRLCPDV-YTFNAFLHGLCQRLDTVSDGVELFESMVSQGT 429
Query: 285 ---------IVGGILDDGGIEFSEEL 301
++ GI GG+E + E+
Sbjct: 430 SPNLHSYSILMDGICRAGGLEVALEI 455
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 115/239 (48%), Gaps = 12/239 (5%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
VA V++ LC + DEA + +R P + ++NV DG C R DA
Sbjct: 8 VAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYV-----TYNVFIDGLCKAERVDDAF 62
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
++ +KM E +C P T+++ L+D L K G L EA + +M +KG +P TY +++D
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKM-- 261
+ RV++ F M+ +G RP+ VY L+ L + G +EA + + + +K
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182
Query: 262 --DDASYKFMMKALSDGGKLDEILEIVGG-ILDDGGIEFSEELQEFVKGELSKEGREEE 317
D +Y ++ L G++ E ++ ++ G I + + G L K GR EE
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDG-LCKLGRVEE 240
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 129/314 (41%), Gaps = 50/314 (15%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V ++ ++ G R+ D F + E + G D V Y + G ++A +
Sbjct: 6 DMVAFTVVINGLCREKRLDEAFSVLE--RAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + + V +++D L G+ DEA+ + ++M + N P L ++
Sbjct: 64 LLKKM--DEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSP-----TLKTYT 116
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCS-------------------------------- 156
V+ DG GR ++A +F M C
Sbjct: 117 VVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANAR 176
Query: 157 -------PDTLSFNNLIDQLCKNGMLAEAEELY-GEMSDKGVNPDEYTYGLLMDACFEVN 208
PD +++ +LID LCK G + EA +++ E ++G PD TY ++D ++
Sbjct: 177 KHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLG 236
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
RV++G F +M + G P+ Y L+ ++ M+ +A + M++ + +Y
Sbjct: 237 RVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYN 296
Query: 268 FMMKALSDGGKLDE 281
++ L G++ E
Sbjct: 297 IILDGLCKAGRVAE 310
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
CSPD ++F +I+ LC+ L EA + G PD TY + +D + RVDD
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKAL 273
+KM + P Y LV L++ G LDEA + + MV+K +Y ++ L
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAK 333
S G+++E I +L +G + +KG L K G+ EE L ++ K A
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKG-LCKSGKPEEAYALYKEANARKHHAT 181
Query: 334 A 334
A
Sbjct: 182 A 182
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 46/228 (20%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKG------- 56
+G VA V YS LM GF +G+ LF + ++ G + V Y +++G
Sbjct: 321 RGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR--GCEPNLVSYNIIIRGLCRAGKL 378
Query: 57 -----YFMKGMEE------------------------EAMECYNEAVGENSSVKMSAVAN 87
YF K ++ + +E + V + +S + +
Sbjct: 379 AKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSY-- 436
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+ ++D +C G + AL++F M + P ++ FN + C GR +A+EVF
Sbjct: 437 SILMDGICRAGGLEVALEIFREMVSRGVAP-----DVVVFNTLIRWLCIAGRVDEALEVF 491
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
R++ E R +PD S+ +L+D L + + EA L M +G P Y
Sbjct: 492 REL-ERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPRHY 538
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 133/264 (50%), Gaps = 17/264 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGFV D V Y L+ G +GD + LF E + K + D VVY SL+KG +G+
Sbjct: 344 KGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAK--DLKPDLVVYNSLVKGLCRQGLI 401
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF-DEALKLFDRMKNEHNPPKRLAV 122
A++ NE V E + N +++ LC G D A+ + D + + P
Sbjct: 402 LHALQVMNEMVEEGCHPDIWTY--NIIINGLCKMGNISDAAVVMNDAIVKGYLP------ 453
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ +FN + DGYC + + A+++ +M Y +PD +++N++++ LCK G E E +
Sbjct: 454 DVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETF 513
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM KG P+ TY +L++ ++N++++ + +M GL P+ +N L+ +
Sbjct: 514 EEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRN 573
Query: 243 GMLDEAKSFFDIMVKKLKMDDASY 266
G LD A F K+D+ Y
Sbjct: 574 GDLDGAYLLFQ------KLDEKGY 591
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 24/299 (8%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG-- 61
+G A P Y ++ G G LF+E+ + V D + +++ KG
Sbjct: 170 RGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGR--DVFPDVATFNNVLHALCQKGDV 227
Query: 62 MEEEAMECYNEAVGENSSVKMSA--VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
ME A+ + + MSA N + LC +G+ +EA+ L +RM
Sbjct: 228 MESGAL------LAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG------AY 275
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+A ++ ++N + G C + ++A + +M C PD ++N +ID CK+GML EA
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL + KG PD TY L++ ++ F + L+P+L VYN LV L
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL-----EIVGGILDD 292
+ G++ A + MV++ D +Y ++ L G + + IV G L D
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPD 454
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 10/243 (4%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--KRLAVNLGSFNVMADGYCGQGRF 140
+A A N+++DAL N D+A K++ RM P + V L SF C GR
Sbjct: 105 AAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSF-------CLTGRP 157
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
A+ + R + E C ++ ++ L +G A L+ EM + V PD T+ +
Sbjct: 158 HVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNV 217
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK 260
+ A + V + K++ G+ N N + L + G L+EA + + M +
Sbjct: 218 LHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVA 277
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
D +Y +M+ L K+ E + +G +++ G I + G K G +E +
Sbjct: 278 PDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDG-YCKSGMLQEATE 336
Query: 321 LME 323
L++
Sbjct: 337 LLK 339
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 2/193 (1%)
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
Y GR + A++ F +M + C P ++N ++D L +A ++Y M GV P
Sbjct: 80 AYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAP 139
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
D T+ + + + R R + + G A Y +V L G A+ F
Sbjct: 140 DARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLF 199
Query: 253 DIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSK 311
D M+ + + D A++ ++ AL G + E ++ +L G +++G L +
Sbjct: 200 DEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRG-LCE 258
Query: 312 EGREEEVVKLMEK 324
+GR EE V L+E+
Sbjct: 259 DGRLEEAVALVER 271
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 153/338 (45%), Gaps = 25/338 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D + YS L+ GF G G F L E+ L + D Y L+ +G
Sbjct: 301 RGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMT--LKNINPDVYTYTILIDALCKEGKL 358
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAV 122
+EA V VK + V ++++D C G+ A ++F M + E NP
Sbjct: 359 KEAKNLL--GVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNP------ 410
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ S+N+M +G C +A+ + R+M P+T+++N+LID LCK+G + A +L
Sbjct: 411 SVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLM 470
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
E+ +G D TY L+D + +D F KM + G++PN Y L+ L +
Sbjct: 471 KELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 530
Query: 243 GMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
L A+ F I+VK +D +Y M+ L G LDE L + + D+G I +
Sbjct: 531 ARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTF 590
Query: 302 QEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+ ++ L EK E +KAE E A
Sbjct: 591 EIIIRS-------------LFEKDENDKAEKLLHEMIA 615
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 151/345 (43%), Gaps = 10/345 (2%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ + ++ + LM G G+ +++ + G + V YG+L+ G G
Sbjct: 197 GYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQ--GFQMNQVSYGTLLNGLCKIGETR 254
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ E+ S + V N+++D LC + +EA + M + P ++
Sbjct: 255 CAIKLLRMI--EDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFP-----DV 307
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + G+C G+ A + +M +PD ++ LID LCK G L EA+ L G
Sbjct: 308 ITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGV 367
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ +GV P+ TY LMD V V + F MV + + P++ YN ++ L +
Sbjct: 368 MTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKS 427
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+DEA + +++ K + + +Y ++ L G++ L+++ + G
Sbjct: 428 VDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTS 487
Query: 304 FVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSAR 348
+ G + ++ + M+ KER K + + AR
Sbjct: 488 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGAR 532
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 88/191 (46%), Gaps = 6/191 (3%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+L +L F A+ L +M+ + P +L + +++ + +C G+ + V K
Sbjct: 138 ILGSLVKMKHFPTAISLSKQMEVKGIEP-----DLVTLSILINCFCHLGQMAFSFSVLGK 192
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
+ + P+T+ L+ LC G + ++ + ++ +G ++ +YG L++ ++
Sbjct: 193 ILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGE 252
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
R + D RP++ +YN ++ L + +++EA F+ M + + D +Y
Sbjct: 253 TRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYST 312
Query: 269 MMKALSDGGKL 279
++ G+L
Sbjct: 313 LICGFCLAGQL 323
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
DA+ F M R +P + F ++ L K A L +M KG+ PD T +L
Sbjct: 114 HDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSIL 173
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKL 259
++ + ++ + K++ G +PN + L+ L G + ++ F D ++ +
Sbjct: 174 INCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGF 233
Query: 260 KMDDASYKFMMKALSDGG 277
+M+ SY ++ L G
Sbjct: 234 QMNQVSYGTLLNGLCKIG 251
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 146/311 (46%), Gaps = 22/311 (7%)
Query: 8 ADPVVYSYLML--GFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
DP Y++ +L ++G ++ GV + + EK D V Y +LM+GY +
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEK-----PDIVTYNALMEGYCSREN 315
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA E +N V ++ + N ++D C DEA+ LF + N K L
Sbjct: 316 VHEARELFNRMVKR--GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN-----KNLVP 368
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ S+N + DG C GR ++ +M PD +++N LID LCK G + EA +
Sbjct: 369 TIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVL 428
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M KGV P+ TY +MD N V+ F +MV SGL P++ YN L+ +
Sbjct: 429 VMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKT 488
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG----IEF 297
M+DEA F M K L D ASY ++ L + G++ + E++ + D G I +
Sbjct: 489 EMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITY 548
Query: 298 SEELQEFVKGE 308
+ L F K +
Sbjct: 549 NILLDAFCKTQ 559
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 139/280 (49%), Gaps = 12/280 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGME 63
G+ + V ++ ++ GF +G +F+ + + L G + D YG+L+ G G
Sbjct: 120 GYQPNLVTFNTIINGFCING---MIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A+ E E SSV+ + V ++++D LC +G +AL L ++ + + ++
Sbjct: 177 KAALHLLQEM--EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGE-----RGILLD 229
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + DG C GR+++ ++ KM PD +FN LID LCK G + EA+ +
Sbjct: 230 AVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLA 289
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
MS +G PD TY LM+ V + F +MV GL P++ YN L+ +
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
M+DEA F ++ K L ASY ++ L + G++ +
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 155/355 (43%), Gaps = 39/355 (10%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y+ LM G+ + LF + ++ G+ D + Y L+ GY M
Sbjct: 294 RGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR--GLEPDVLNYNVLIDGYCKTKMV 351
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------ 117
+EAM + E +N +++ NS++D LCN+G+ KL D M PP
Sbjct: 352 DEAMVLFKELCNKNLVPTIASY--NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409
Query: 118 ------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
K + N+ ++N M DGYC + A ++F +M +
Sbjct: 410 ILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKS 469
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
PD L++N LI+ CK M+ EA L+ EM K + PD +Y L+D + R+
Sbjct: 470 GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHV 529
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKAL 273
+M DSG P++ YN L+ + D+A S F +V+ + D + ++ L
Sbjct: 530 QELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNL 589
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKGELSKEGREEEVVKLMEKKE 326
G KL + + +L G S +Q + + L K+G E + L+ K E
Sbjct: 590 CKGEKLKMAEDALKHLLMHGC---SPNVQTYTILINALCKDGSFGEAMLLLSKME 641
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 121/258 (46%), Gaps = 10/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ +M G+ + + +F + + G+ D + Y L+ GY
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK--SGLEPDILNYNVLINGYCKT 488
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M +EA+ + E +N +++ NS++D LCN G+ +L D M + P +
Sbjct: 489 EMVDEAIVLFKEMRHKNLIPDIASY--NSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVI 546
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N++ D +C F AI +FR++ E PD + + ++D LCK L AE+
Sbjct: 547 -----TYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAED 600
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ G +P+ TY +L++A + + KM D+ P+ + ++G L+
Sbjct: 601 ALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLL 660
Query: 241 QVGMLDEAKSFFDIMVKK 258
Q D+A+ + M+ +
Sbjct: 661 QRNETDKAEKLREEMIAR 678
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 129/277 (46%), Gaps = 11/277 (3%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+ C+N V S + +L A+ G + A+ LF ++++ K ++ +
Sbjct: 37 DDAVTCFNRMVRVFPPPPTSVF--DKLLGAIVRMGHYPTAISLFTQLQS-----KGISPS 89
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +F ++ + Y Q A + + + P+ ++FN +I+ C NGM+ +A +
Sbjct: 90 IATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ +G D++TYG L++ + ++ ++M S ++PNL +Y+ L+ L + G
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+ +A I + + +D +Y ++ G+ E+ +++ ++ + ++ +
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE-NVDPDDYTF 268
Query: 303 EFVKGELSKEGR--EEEVVKLMEKKEREKAEAKAREA 337
+ L KEGR E + V M K EK + A
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 124 bits (311), Expect = 8e-26, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 135/280 (48%), Gaps = 11/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + D Y L+ G + + +L E++K G D YG ++
Sbjct: 1042 MTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMK---GNCKGDVFTYGMIIDALCKD 1098
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM EA++ ++E +G + + V +S++D LC G+ EAL+ F M+ + +
Sbjct: 1099 GMTTEALDMFSEMIG--AGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG-----RGI 1151
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ ++N + G G +K+ M + SPD +F LID LCK G + EA++
Sbjct: 1152 SADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQ 1211
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M KG PD TY LM+ V +++D F + D G++ N+ YN L+
Sbjct: 1212 ILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC 1271
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
+ +DEA FF+ M K LK +Y ++ AL G++
Sbjct: 1272 KDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRV 1311
Score = 117 bits (292), Expect = 1e-23, Method: Composition-based stats.
Identities = 88/355 (24%), Positives = 162/355 (45%), Gaps = 36/355 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + D VVYS LM G R G F+E++ + G+ +D Y SL+ G
Sbjct: 1111 MIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR--GISADVYTYNSLIHGLSRA 1168
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
G+ +E N V S A ++D LC GK EA ++ + M+++ P
Sbjct: 1169 GLWKEVTWFLNLMVDRGFSP--DAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDIL 1226
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ + +N+ S+N++ +GYC + +A F +M
Sbjct: 1227 TYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEM 1286
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
P T+++N LI LC++G + A++L+ EM G TY +L+D + +
Sbjct: 1287 RPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHL 1346
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFM 269
++ F+ + + +PN+ V++ L+ + + G L+EA K F +I L+ D +Y +
Sbjct: 1347 EEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNIL 1406
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ L + G L E ++++ + + G + S ++ L KE E ++L+E+
Sbjct: 1407 INGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQ-NLLKENEIHEAIQLLEE 1460
Score = 116 bits (291), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/234 (29%), Positives = 119/234 (50%), Gaps = 11/234 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + Y+ L+ G+ +D D FR FEE++ K G+ V Y +L+ G
Sbjct: 1254 RGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPK--GLKPSTVTYNTLIGALCQSGRV 1311
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK-NEHNPPKRLAV 122
A + + E +K+S +LD LC NG +EA+ LF +K EH P
Sbjct: 1312 RTAQKLFVEMQTCGQFLKLSTYC--VLLDGLCKNGHLEEAMDLFQSIKKTEHKP------ 1363
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ F+++ DG C G+ ++A + F ++ + PDT+++N LI+ LC GML+EA +L
Sbjct: 1364 NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 1423
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+M +KG PD T+ +++ + N + + +M + P+ AV + L+
Sbjct: 1424 WQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 97.8 bits (242), Expect = 8e-18, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 9/271 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D + Y+ LM G G + +LFE L ++ G+ + Y L+ GY
Sbjct: 1219 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR--GIKLNVFSYNILINGYCKDQKI 1276
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + E +K S V N+++ ALC +G+ A KLF M+ +
Sbjct: 1277 DEAFRFFEEM--RPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ-----FLK 1329
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L ++ V+ DG C G ++A+++F+ + + P+ F+ L+D +C+ G L EA + +
Sbjct: 1330 LSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 1389
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+S G+ PD Y +L++ + + +M + G P+ +N ++ L++
Sbjct: 1390 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 1449
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALS 274
+ EA + M + D + M+ L+
Sbjct: 1450 EIHEAIQLLEEMRNRNFSPDEAVTSMLLCLA 1480
Score = 90.5 bits (223), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 7/186 (3%)
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A++LFD M K L + ++ ++ +G C + AI++ KM + C D +
Sbjct: 1034 DAVQLFDEMTK-----KGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFT 1087
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ +ID LCK+GM EA +++ EM G+ PD Y LMD R+ + +F++M
Sbjct: 1088 YGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 1147
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLD 280
G+ ++ YN L+ L + G+ E F ++MV + DA ++ ++ L GK+
Sbjct: 1148 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVG 1207
Query: 281 EILEIV 286
E +I+
Sbjct: 1208 EAQQIL 1213
Score = 58.9 bits (141), Expect = 5e-06, Method: Composition-based stats.
Identities = 68/307 (22%), Positives = 119/307 (38%), Gaps = 87/307 (28%)
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
K ++A+KLFDR P +FN + G + ++RK+ + PD
Sbjct: 926 KLNDAIKLFDRSLCSEPMP-----CTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPD 980
Query: 159 TLSFNNLIDQLC------------------------------------KNGMLAEAEELY 182
+ N LI C +NG + +A +L+
Sbjct: 981 LYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENG-IPDAVQLF 1039
Query: 183 GEMSDKGV----------------------------------NPDEYTYGLLMDACFEVN 208
EM+ KG+ D +TYG+++DA +
Sbjct: 1040 DEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDG 1099
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYK 267
+ F +M+ +G+ P++ VY+ L+ L + G L EA FF M + + D +Y
Sbjct: 1100 MTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYN 1159
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF---VKGELSKEGR---EEEVVKL 321
++ LS G E+ + ++D G FS + F + G L KEG+ +++++L
Sbjct: 1160 SLIHGLSRAGLWKEVTWFLNLMVDRG---FSPDAFTFTILIDG-LCKEGKVGEAQQILEL 1215
Query: 322 MEKKERE 328
M K +E
Sbjct: 1216 MRHKGKE 1222
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 14/178 (7%)
Query: 115 NPPKRLAVN-----------LGSFNVMADGYCGQG--RFKDAIEVFRKMGEYRCSPDTLS 161
NPP+R N L F C G + DAI++F + P T +
Sbjct: 889 NPPQRSGSNSKSEKIGTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDT 948
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
FN+L+ + K G + +Y +++D G+ PD YT +L+ C + V G F +
Sbjct: 949 FNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFL 1008
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGK 278
G P+ LV + + +A FD M KK + DA +Y ++ L K
Sbjct: 1009 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARK 1066
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 150/330 (45%), Gaps = 22/330 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G ++ S ++LF+E+ L G+V D V Y +L++G G
Sbjct: 230 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA--LRGLVLDTVCYTALIRGLLQAGKIP 287
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A Y + + V ++++D LC G+ A+++F M+ + LA N
Sbjct: 288 QASSVYKTMTSQGCVPDV--VTLSTMIDGLCKAGRIGAAVRIFKSME-----ARGLAPNE 340
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G C + A+E+ +M + C+PDT+++N LID LCK+G + A + E
Sbjct: 341 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 400
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + G PD YTY +L+ + D F M S PN+ Y L+ L +
Sbjct: 401 MLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQ 460
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI-----LDDGGIEFS 298
L +A +F M ++ D Y ++ L GKL+ GG ++ G+ S
Sbjct: 461 LTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLE------GGCMLFDEMERSGVANS 514
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKERE 328
+ + L K R +E V L +E
Sbjct: 515 QTRTRLI-FHLCKANRVDEAVSLFNAIRKE 543
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 129/282 (45%), Gaps = 14/282 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D V S ++ G + G R+F+ ++ + G+ + VVY +L+ G
Sbjct: 296 MTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR--GLAPNEVVYSALIHGL--- 350
Query: 61 GMEEEAMECYNEAVGE--NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ M+C E + + + + N ++D LC +G + A FD M P
Sbjct: 351 -CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP- 408
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ ++N++ G+C G A VF M CSP+ +++ LI LCK L +A
Sbjct: 409 ----DVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKA 464
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ M ++G PD + Y L+D + +++ G F +M SG+ N RL+
Sbjct: 465 SLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFH 523
Query: 239 LVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLD 280
L + +DEA S F+ + K+ +Y ++ L K++
Sbjct: 524 LCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISTLIKSAKVN 565
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 133/293 (45%), Gaps = 9/293 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G V D V Y+ L+ G ++ G +++ + + G V D V +++ G
Sbjct: 261 MALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQ--GCVPDVVTLSTMIDGLCKA 318
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A+ + E + + V ++++ LC K D AL++ +MK P +
Sbjct: 319 GRIGAAVRIFKSM--EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 376
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N++ DG C G + A F +M E C PD ++N L+ CK G A
Sbjct: 377 -----TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACG 431
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +MS +P+ TYG L+ + ++ + YF+ M + G P+ VY+ LV L
Sbjct: 432 VFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLC 491
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G L+ FD M + + + ++ L ++DE + + I +G
Sbjct: 492 KSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 544
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 131/283 (46%), Gaps = 9/283 (3%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
F+ D ++ L+ G+ + + F + E++E G V + ++ G G
Sbjct: 90 FLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYG-VAPSLKTHNLVLHGLCKSGKVLA 148
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
AM+ + ++ + +++D L N K +A+ L +++ P +
Sbjct: 149 AMDHFETTTTNGCTIDIHTY--TAIVDWLAKNKKIQDAVALMEKITANGCTP-----TIA 201
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + +G C GR ++AI++ RK+ + C+PD +++ +LID L K EA +L+ EM
Sbjct: 202 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 261
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ +G+ D Y L+ + ++ ++ ++ M G P++ + ++ L + G +
Sbjct: 262 ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 321
Query: 246 DEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
A F M + L ++ Y ++ L K+D LE++
Sbjct: 322 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 364
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 100/244 (40%), Gaps = 41/244 (16%)
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRF 140
+ S N++LD + EA L +KNE ++ ++NV+ GYC
Sbjct: 56 QHSVHTGNALLDVFARTKRHREAGNL---LKNEL--ATTFLPDVETWNVLITGYCLAREP 110
Query: 141 KDAIEVFRKMGE-YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
++A V R+M E Y +P + N ++ LCK+G + A + + + G D +TY
Sbjct: 111 EEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTA 170
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKL 259
++D + ++ D K+ +G P +A YN L+ L ++
Sbjct: 171 IVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKM----------------- 213
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
G+L+E ++++ I+D+G + G L KE R E
Sbjct: 214 -----------------GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG-LGKEKRSFEAY 255
Query: 320 KLME 323
KL +
Sbjct: 256 KLFK 259
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 164/353 (46%), Gaps = 41/353 (11%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D + YS L+ GF + D +RL +E++++ G+V VY +++KG G + A+
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKR--GIVPHNAVYNTIIKGLCDNGRVDSAL 222
Query: 68 ECYN-----------------EAVGENSSVK---------------MSAVANNSVLDALC 95
Y +A+ +++ + + V N++++ C
Sbjct: 223 VHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 282
Query: 96 NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
G DEA+ LF++M P ++ ++N++ DGYC Q R +D ++ ++M +Y C
Sbjct: 283 KLGNMDEAVVLFNQMLENSCSP-----DVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 337
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
P+ +++N L+D L K+G +A L M + P +T+ L++D +V ++D
Sbjct: 338 EPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 397
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
F+ M D G P++ YN ++ + +D+A+ + M + D +Y ++ L
Sbjct: 398 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 457
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
++DE E V +L +GG + L K R ++ KL+ + ER
Sbjct: 458 KASQVDEAYE-VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 509
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 144/310 (46%), Gaps = 12/310 (3%)
Query: 16 LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVG 75
L+ FVR + + LF+ + G D + Y +L+ G+ ++A +E
Sbjct: 138 LLSAFVRKKKAQEAYDLFKN--HRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM-- 193
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E + N+++ LC+NG+ D AL + M+ P ++ ++ ++ D C
Sbjct: 194 EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAP------SVITYTILVDALC 247
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
R DA + M E C+P+ +++N LI+ CK G + EA L+ +M + +PD +
Sbjct: 248 KSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVF 307
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
TY +L+D + R DGA ++MV G PN YN L+ LV+ G +A + +M
Sbjct: 308 TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMM 367
Query: 256 VKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
+++ K ++ M+ G+LD E+ + D G + + G + R
Sbjct: 368 LRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGA-CRANR 426
Query: 315 EEEVVKLMEK 324
++ +L+E+
Sbjct: 427 IDDARQLLER 436
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 9/252 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + D Y+ ++ G R D +L E + E G D V Y S++ G
Sbjct: 405 RGCLPDIYTYNIMISGACRANRIDDARQLLERMTE--AGCPPDVVTYNSIVSGLCKASQV 462
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA E Y V N + V ++++D LC + + D+A KL M+ + P +A
Sbjct: 463 DEAYEVYE--VLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVA-- 518
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ G+C + ++ F +M + C P ++++ +ID+LCK+ + + L
Sbjct: 519 ---YTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLK 575
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M ++GV PD Y ++D + + D+ ++ M +G P + YN LV KL +V
Sbjct: 576 TMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVS 635
Query: 244 MLDEAKSFFDIM 255
LDEA ++M
Sbjct: 636 RLDEAIHLLEVM 647
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 149/357 (41%), Gaps = 37/357 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y+ L+ GF + G+ D LF ++ E D Y L+ GY +
Sbjct: 262 MIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLE--NSCSPDVFTYNILIDGYCKQ 319
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++ + E V + + + N+++D+L +GK+ +A L M P
Sbjct: 320 ERPQDGAKLLQEMV--KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHF 377
Query: 121 AVNL------------------------------GSFNVMADGYCGQGRFKDAIEVFRKM 150
NL ++N+M G C R DA ++ +M
Sbjct: 378 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM 437
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E C PD +++N+++ LCK + EA E+Y + + G D T L+D + R+
Sbjct: 438 TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRL 497
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFM 269
DD R+M +G P++ Y L+ + LD++ +FF M+ K + +Y +
Sbjct: 498 DDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIV 557
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE--EVVKLMEK 324
+ L ++ + ++ +L+ G + + G + +E E+ KLM++
Sbjct: 558 IDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQ 614
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 9/249 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D V S L+ G + D +L E++ G D V Y L+ G+ +
Sbjct: 476 GYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER--NGSAPDVVAYTILIHGFCKADQLD 533
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+++ ++E + + + + + V+D LC + + + L M P +
Sbjct: 534 KSLAFFSEML--DKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIV--- 588
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ + DG C + +A E+++ M + C+P +++N L+D+LCK L EA L
Sbjct: 589 --YTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEV 646
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G PD TY + D ++ D F+ M G P +Y+ L+ KLV
Sbjct: 647 MESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEK 706
Query: 245 LDEAKSFFD 253
+D+A ++
Sbjct: 707 MDQAMEIWE 715
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 41/211 (19%)
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
D+A+K FD + + + N + + + + ++A ++F+ CSPD+
Sbjct: 112 LDKAVKFFDWCTGQPG----YKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDS 167
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE------------------------- 194
++++ LI+ CK +A L EM +G+ P
Sbjct: 168 ITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRD 227
Query: 195 ---------YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
TY +L+DA + R+ D + M+++G PN+ YN L+ ++G +
Sbjct: 228 MQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNM 287
Query: 246 DEAKSFFDIMVKKLKMDDASYKFMMKALSDG 276
DEA F+ M++ D F L DG
Sbjct: 288 DEAVVLFNQMLENSCSPDV---FTYNILIDG 315
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 150/309 (48%), Gaps = 16/309 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ G R GD+ F + +++E+ V +D Y +++ G +
Sbjct: 188 GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEER--NVKADVFTYSTIIDSLCRDGCID 245
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF-DEALKLFDRMKNEHNPPKRLAVN 123
A+ + E E +K S V NS++ LC GK+ D AL L D + E P N
Sbjct: 246 AAISLFKEM--ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP------N 297
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FNV+ D + +G+ ++A E++++M SP+ +++N L+D C L+EA +
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +PD T+ L+ V RVDDG FR + GL N Y+ LV Q G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGI----LDDGGIEFS 298
+ A+ F MV + D +Y ++ L D GKL++ LEI + +D G + ++
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 299 EELQEFVKG 307
++ KG
Sbjct: 478 TIIEGMCKG 486
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 157/324 (48%), Gaps = 28/324 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + V + + ++ L+ FV++G L++E+ + G+ + + Y +LM GY M+
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR--GISPNIITYNTLMDGYCMQ 346
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR- 119
EA + V S + V S++ C + D+ +K+F N KR
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDI--VTFTSLIKGYCMVKRVDDGMKVF------RNISKRG 398
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L N +++++ G+C G+ K A E+F++M + PD +++ L+D LC NG L +A
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
E++ ++ ++ Y +++ + +V+D F + G++PN+ Y ++ L
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518
Query: 240 VQVGMLDEAKSFFDIMVKKLKMD-----DASYKFMMKA-LSDG-----GKLDEILEIVGG 288
+ G L EA +I+++K++ D D +Y +++A L DG KL E ++ G
Sbjct: 519 CKKGSLSEA----NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 289 ILDDGGIEFSEELQEFVKGELSKE 312
D I+ ++ + GEL K
Sbjct: 575 SADASSIKMVIDM--LLSGELDKS 596
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N++++ LC GK +A+ L DRM P ++ ++N + +G C G A ++
Sbjct: 162 NTLINGLCLEGKVSKAVVLVDRMVENGCQP-----DMVTYNSIVNGICRSGDTSLAFDML 216
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
RKM E D +++ +ID LC++G + A L+ EM KG+ TY L+ +
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+ +DGA + MV + PN+ +N L+ V+ G L EA + M+ + + + +Y
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
Query: 267 KFMMKALSDGGKLDE 281
+M +L E
Sbjct: 337 NTLMDGYCMQNRLSE 351
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 85/157 (54%), Gaps = 1/157 (0%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+FN + +G C +G+ A+ + +M E C PD +++N++++ +C++G + A ++ +M
Sbjct: 160 TFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKM 219
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
++ V D +TY ++D+ +D + F++M G++ ++ YN LV L + G
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 246 DEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
++ D++ +++ + ++ ++ GKL E
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+A N+ + N+M + +C + A V K+ + PDT +FN LI+ LC G +++A
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAV 178
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF---RKMVDSGLRPNLAVYNRLV 236
L M + G PD TY +++ + R D + F RKM + ++ ++ Y+ ++
Sbjct: 179 VLVDRMVENGCQPDMVTYNSIVNG---ICRSGDTSLAFDMLRKMEERNVKADVFTYSTII 235
Query: 237 GKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE----ILEIVGGILD 291
L + G +D A S F M K +K +Y +++ L GK ++ + ++V +
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 292 DGGIEFSEELQEFVKGELSKEGREEE 317
I F+ L FV KEG+ +E
Sbjct: 296 PNVITFNVLLDVFV-----KEGKLQE 316
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y+ ++ G+ G D RL ++ + D Y +L++G +G A+
Sbjct: 123 DVMAYNAMVAGYCVTGQLDAARRLVADMPME-----PDSYTYNTLIRGLCGRGRTGNALV 177
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
++ + + V +L+A C + +A+KL D M+ K A ++ ++N
Sbjct: 178 VLDDMLRRGCVPDV--VTYTILLEATCKRSGYKQAMKLLDEMRA-----KGCAPDIITYN 230
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
V+ +G C +GR DAIE + + + C P+T+S+N ++ LC +AE+L EMS K
Sbjct: 231 VVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQK 290
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G P+ T+ +L+ V+ ++ G PN YN ++ + +D A
Sbjct: 291 GYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRA 350
Query: 249 KSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+F ++MV + D SY ++ AL GG++D +E++ + D G + G
Sbjct: 351 MAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDG 410
Query: 308 ELSKEGREEEVVKLM 322
L+K G+ +E ++L+
Sbjct: 411 -LTKAGKTKEALELL 424
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 10/291 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G + V Y+ ++ G + +L E+ +K G + V + L+ +G+
Sbjct: 255 HGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQK--GYPPNVVTFNMLISFLCRRGLV 312
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E AME ++ ++++ N +L A C K D A+ + M + P +
Sbjct: 313 EPAMEVLDQI--PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYP-----D 365
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S+N + C G A+E+ ++ + C+P +S+N +ID L K G EA EL
Sbjct: 366 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLN 425
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KG+ PD TY + +R+++ F K+ D G+RPN +YN ++ L +
Sbjct: 426 EMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRR 485
Query: 244 MLDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
A F M+ M ++++Y +++ L+ G + E E++G + G
Sbjct: 486 ETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRG 536
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ R G+ D L +LK+K G + Y +++ G
Sbjct: 357 MVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK--GCTPVLISYNTVIDGLTKA 414
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+E NE V ++ + +++ LC + +EA++ F ++++ P
Sbjct: 415 GKTKEALELLNEMV--TKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRP--- 469
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +N + G C + +AI++F M C P+ ++ LI+ L G++ EA E
Sbjct: 470 --NTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARE 527
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
L GE+ +GV + GL+ A R+ DG T+
Sbjct: 528 LLGELCSRGV----VSKGLINKAAI---RLLDGTTH 556
>gi|255661020|gb|ACU25679.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 376
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 140/282 (49%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +K+ G V D + YG L+ G+ G +++
Sbjct: 62 FNIMMRGLFNNGKVDEVILIWELMKKS--GFVEDSITYGILVHGFCKNGDVNKSLHVLE- 118
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ E + A A +++++ LC + K D+A+ + + M P N +N + +
Sbjct: 119 -IAEMKGGVLDAFAYSAMINGLCKDSKLDKAVSVLNGMIKSGCKP-----NAHVYNALIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VF++MG CSP +++N LI+ LCK EA +L EM +KG NP
Sbjct: 173 GLVGSSKFEDAIRVFQEMGSTHCSPTIITYNTLINGLCKGERFGEAYDLVKEMLEKGWNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY +L+ ++V+ + ++ G +P++ ++N L+ L VG + A S +
Sbjct: 233 CVITYSMLIKGLCLCHKVEMALQLWYQVTSKGFKPDIQMHNILIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ + ++ +M+ G + L I IL +G
Sbjct: 293 FDMNHWNCAPNLVTHNTLMEGFYKDGDVRNALVIWARILRNG 334
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 133/276 (48%), Gaps = 10/276 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++GD + + E+ E GGV+ D Y +++ G +
Sbjct: 89 GFVEDSITYGILVHGFCKNGDVNKSLHVL-EIAEMKGGVL-DAFAYSAMINGLCKDSKLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ N + S K +A N++++ L + KF++A+++F M + H P +
Sbjct: 147 KAVSVLNGMI--KSGCKPNAHVYNALINGLVGSSKFEDAIRVFQEMGSTHCSPTII---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C RF +A ++ ++M E +P ++++ LI LC + A +L+ +
Sbjct: 201 -TYNTLINGLCKGERFGEAYDLVKEMLEKGWNPCVITYSMLIKGLCLCHKVEMALQLWYQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + + M PNL +N L+ + G
Sbjct: 260 VTSKGFKPDIQMHNILIHGLCSVGKMQLALSLYFDMNHWNCAPNLVTHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
+ A + I+ L+ D SY +K L ++
Sbjct: 320 VRNALVIWARILRNGLQPDIISYNITLKGLCSCNRI 355
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 102/231 (44%), Gaps = 7/231 (3%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S + + AV N++L+ G+ + +L++ M E + N+ SFN+M G
Sbjct: 19 SKLSLDAVVYNTMLNGFFRVGRIKDCFELWELMGKEGSR------NVASFNIMMRGLFNN 72
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G+ + I ++ M + D++++ L+ CKNG + ++ + KG D + Y
Sbjct: 73 GKVDEVILIWELMKKSGFVEDSITYGILVHGFCKNGDVNKSLHVLEIAEMKGGVLDAFAY 132
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-V 256
+++ + +++D + M+ SG +PN VYN L+ LV ++A F M
Sbjct: 133 SAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKFEDAIRVFQEMGS 192
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+Y ++ L G + E ++V +L+ G +KG
Sbjct: 193 THCSPTIITYNTLINGLCKGERFGEAYDLVKEMLEKGWNPCVITYSMLIKG 243
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++ +V+S L + VYN ++ +VG + + +++M K+ + AS+ M
Sbjct: 6 IDGAEMVYKDIVESKLSLDAVVYNTMLNGFFRVGRIKDCFELWELMGKEGSRNVASFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
M+ L + GK+DE++ I + G +E S V G K G + + ++E E
Sbjct: 66 MRGLFNNGKVDEVILIWELMKKSGFVEDSITYGILVHG-FCKNGDVNKSLHVLEIAE 121
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 143/280 (51%), Gaps = 11/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D + ++ L+ G+ R D +L E+ E G+V++ + Y +L+ G+
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE--AGLVANTITYTTLIHGFCQV 409
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEH 114
G A + E V +S V + V N++LD LC+NGK +AL++F M+ +
Sbjct: 410 GDLNAAQDLLQEMV--SSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDAS 467
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
+P + ++ ++N++ G +G+F +A E++ +M PDT+++N++I LCK
Sbjct: 468 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSR 527
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L EA +++ M K +P+ T+ L++ + RVDDG F +M G+ N Y
Sbjct: 528 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 587
Query: 235 LVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKAL 273
L+ +VG ++ A F ++M + D + + M+ L
Sbjct: 588 LIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGL 627
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 147/309 (47%), Gaps = 18/309 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVY-----GSLMK 55
M G + + Y ++ G + GD+ L +++E + + + V++ ++
Sbjct: 205 MLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE-VSHIKPNVVIWPLERRTCMIN 263
Query: 56 GYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
G+ G EA + E + E + V N++++A GKF EA +L+D M
Sbjct: 264 GFCSSGRWSEAQQLLQEML-ERKKISPDVVTYNALINAFVKEGKFFEAEELYDEML---- 318
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P+ + + +++ M DG+C Q R A +F M CSPD ++FN LI C+ +
Sbjct: 319 -PRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRV 377
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+ +L EM++ G+ + TY L+ +V ++ ++MV SG+ PN+ N L
Sbjct: 378 DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTL 437
Query: 236 VGKLVQVGMLDEAKSFFDIMVKKLKMD-DASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+ L G L +A F M +K KMD DAS+ F + + IL + G++++G
Sbjct: 438 LDGLCDNGKLKDALEMFKAM-QKSKMDIDASHPF--NGVEPDVQTYNIL--ISGLINEGK 492
Query: 295 IEFSEELQE 303
+EEL E
Sbjct: 493 FLEAEELYE 501
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 137/281 (48%), Gaps = 13/281 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ LM G R+G L + + E G+ + + YG+++ G G A+
Sbjct: 180 VTFTTLMNGLCREGRVVEAVALLDRMLED--GLQPNQITYGTIVDGMCKMGDTVSALNLL 237
Query: 71 NEAVGENSSVKMSAVA-----NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
+ + E S +K + V +++ C++G++ EA +L M K+++ ++
Sbjct: 238 RK-MEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLER----KKISPDVV 292
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + + + +G+F +A E++ +M P T++++++ID CK L AE ++ M
Sbjct: 293 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLM 352
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ KG +PD T+ L+ RVDDG +M ++GL N Y L+ QVG L
Sbjct: 353 ATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 412
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+ A+ MV + + + ++ L D GKL + LE+
Sbjct: 413 NAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEM 453
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 21/261 (8%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E V +A + ++ C+ K AL F ++ P + +F+ + G C
Sbjct: 105 EMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHP-----TVVTFSTLLHGLC 159
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+ R +A+++F +M C P+ ++F L++ LC+ G + EA L M + G+ P++
Sbjct: 160 VEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQI 215
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVD-SGLRPNLAVY-----NRLVGKLVQVGMLDEAK 249
TYG ++D ++ RKM + S ++PN+ ++ ++ G EA+
Sbjct: 216 TYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQ 275
Query: 250 SFFDIMV--KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
M+ KK+ D +Y ++ A GK E E+ +L G I + + G
Sbjct: 276 QLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDG 335
Query: 308 ELSKEGR---EEEVVKLMEKK 325
K+ R E + LM K
Sbjct: 336 -FCKQNRLDAAEHMFYLMATK 355
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+DAI++F M R P + F L+ + + G L L+ +M + V + Y++ +
Sbjct: 59 LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKL 259
LM +++ + F K+ G P + ++ L+ L + EA F M K
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKP- 177
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ ++ +M L G++ E + ++ +L+DG
Sbjct: 178 --NVVTFTTLMNGLCREGRVVEAVALLDRMLEDG 209
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 5/130 (3%)
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
GR I + RKM R + SF L+ C L A +G+++ G +P T+
Sbjct: 92 GRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTF 151
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
L+ +R+ + F +M +PN+ + L+ L + G + EA + D M++
Sbjct: 152 STLLHGLCVEDRISEALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLE 207
Query: 258 K-LKMDDASY 266
L+ + +Y
Sbjct: 208 DGLQPNQITY 217
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 168/363 (46%), Gaps = 54/363 (14%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+YS ++ +D + F L+ E+ K + D V Y SL+ G+ + G + A++ +
Sbjct: 199 VMYSTIIDSMCKDKLVNDAFDLYCEMVSK--RISPDVVTYSSLISGFCVVGKLKYAVDLF 256
Query: 71 NEAVGEN---------------------------------SSVKMSAVANNSVLDALCNN 97
N + +N +VK+ V NS++D C
Sbjct: 257 NRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLV 316
Query: 98 GKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
+ ++A LF+ M P ++ S+++M +G+C +A+++F +M + P
Sbjct: 317 KQVNKAKSLFNVMAQRGVTP-----DVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFP 371
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
+ +++N+L+D LCK+G + A EL EM D+G + TY ++DA + N VD
Sbjct: 372 NVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLL 431
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDG 276
K+ + G++P++ Y L+ L +VG LD+A+ F D++VK + +Y ++ +
Sbjct: 432 TKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNK 491
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKARE 336
G DE L ++ + D+G I + + + L EK E +KAE RE
Sbjct: 492 GFFDEGLAMLSKMKDNGCIPNAITYEILIHS-------------LFEKDENDKAEKLLRE 538
Query: 337 AEA 339
A
Sbjct: 539 MIA 541
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 138/282 (48%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D + + LM F + G F +F ++ +K G D V + L+KG +KG
Sbjct: 88 GIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKK--GYHPDAVTFTILIKGLCLKGEVH 145
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ +++ V + ++ V+ ++++ LC G+ A++L R+ + P N+
Sbjct: 146 KALYFHDKVVAQ--GFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRP-----NV 198
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + D C DA +++ +M R SPD +++++LI C G L A +L+
Sbjct: 199 VMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNR 258
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +NP+ YT+ +L+D + +V + M+ ++ ++ YN L+ V
Sbjct: 259 MISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQ 318
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+++AKS F++M ++ + D SY M+ +DE +++
Sbjct: 319 VNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKL 360
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 9/241 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K D V Y+ LM G+ + LF + ++ GV D Y ++ G+
Sbjct: 294 MMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQR--GVTPDVWSYSIMINGFCKI 351
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M +EAM+ + E + + V NS++D LC +G+ AL+L D M + P
Sbjct: 352 KMVDEAMKLFEEM--HCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPS--- 406
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N + D C AI + K+ E PD ++ LI+ LCK G L +A++
Sbjct: 407 --NIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQK 464
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ ++ KG +P+ YTY L++ D+G KM D+G PN Y L+ L
Sbjct: 465 VFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLF 524
Query: 241 Q 241
+
Sbjct: 525 E 525
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 13/224 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D YS ++ GF + D +LFEE+ K + + V Y SL+ G G
Sbjct: 332 RGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCK--QIFPNVVTYNSLVDGLCKSGRT 389
Query: 64 EEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
A+E +E G+ S++ + NS+LDA+C N D+A+ L ++K + P
Sbjct: 390 SCALELVDEMHDRGQPSNI----ITYNSILDAICKNNHVDKAIVLLTKIKEKGIQP---- 441
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ ++ V+ +G C GR DA +VF + SP+ ++ +LI+ C G E +
Sbjct: 442 -DIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAM 500
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+M D G P+ TY +L+ + FE + D R+M+ GL
Sbjct: 501 LSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 68/158 (43%), Gaps = 5/158 (3%)
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P + F ++ L K A L +M G+ PD T LLM+ ++ + +
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSD 275
F K++ G P+ + L+ L G + +A F D ++ + ++D SY ++ L
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175
Query: 276 GGKLDEILEIV----GGILDDGGIEFSEELQEFVKGEL 309
G+ ++++ G ++ + +S + K +L
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKL 213
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 111/259 (42%), Gaps = 44/259 (16%)
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
LF+R+ +++NP A+ G + +++ A+ + ++M PD ++ N L
Sbjct: 44 LFNRLLHKNNPIPP-AIEFGK---ILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLL 99
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-C-------------------F 205
++ + G + + ++ ++ KG +PD T+ +L+ C F
Sbjct: 100 MNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGF 159
Query: 206 EVNRVDDG--------------ATYFRKMVDSGL-RPNLAVYNRLVGKLVQVGMLDEAKS 250
++++V G A + VD L RPN+ +Y+ ++ + + ++++A
Sbjct: 160 QLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFD 219
Query: 251 FFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
+ MV K++ D +Y ++ GKL +++ ++ D + G
Sbjct: 220 LYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDG-F 278
Query: 310 SKEGREEE---VVKLMEKK 325
KEG+ E V+ +M KK
Sbjct: 279 CKEGKVREAKNVLAVMMKK 297
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 149/308 (48%), Gaps = 11/308 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ L+ G+ +DG + R+ +E+KE G +V D V YG ++ GY +G
Sbjct: 282 KGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKET-GDIVVDEVAYGMMINGYCQRGRM 340
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A NE ++ + ++ N++++ LC G+ +E K+ M++ P +
Sbjct: 341 DDATRVRNEM--RDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKY--- 395
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N + DGYC +G + A E+ R M + TL++N L+ C + +A L+
Sbjct: 396 --SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +GV P+E + L+D F+ + + +++ + GL N+ +N ++ L ++G
Sbjct: 454 LMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIG 513
Query: 244 MLDEAKSFFDIMVKKLKM--DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+ EA+ D M K+L+ D +Y+ + G+L ++ + G E
Sbjct: 514 RMAEAEELLDRM-KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMF 572
Query: 302 QEFVKGEL 309
F+ G
Sbjct: 573 NSFITGHF 580
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 156/388 (40%), Gaps = 72/388 (18%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G A + Y+ L+ GF D RL+ + ++ GV + + +L+ G F
Sbjct: 420 MVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKR--GVAPNEISCSTLLDGLFKA 477
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A+ + E + + + + N+V++ LC G+ EA +L DRMK PP L
Sbjct: 478 GKTEQALNLWKETLAR--GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSL 535
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKM-----------------GEYRC-------- 155
++ + DGYC G+ A + KM G +
Sbjct: 536 -----TYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVND 590
Query: 156 ----------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
SP+ +++ LI CK G L EA LY EM + G+NP+ + LM +
Sbjct: 591 IHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFY 650
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAV--------------------------YNRLVGKL 239
+ +VD+ +K+V+ + P ++ +N ++ L
Sbjct: 651 KEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGL 710
Query: 240 VQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ G + +AKS F+ + K+ D+ +Y ++ + G +DE + +L G
Sbjct: 711 CKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNI 770
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKE 326
+ G L K G+ V L K +
Sbjct: 771 ITYNSLIYG-LCKSGKLSRAVNLFNKLQ 797
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 145/325 (44%), Gaps = 10/325 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G + D + + + RDG EE++ G+ + V Y ++M Y
Sbjct: 209 MRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGM--GLEVNLVAYHAVMDCYCGM 266
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A + + + V ++ C +G+ +EA ++ MK + +
Sbjct: 267 GWTEDARRILESL--QRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGD----I 320
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
V+ ++ +M +GYC +GR DA V +M + + +N +I+ LCK G + E ++
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EM D G+ PD+Y+Y L+D + R MV +GL YN L+
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFC 440
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ +D+A + +M+K+ + ++ S ++ L GK ++ L + L G +
Sbjct: 441 SLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVI 500
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+ G L K GR E +L+++
Sbjct: 501 TFNTVING-LCKIGRMAEAEELLDR 524
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 9/250 (3%)
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP--P------KRLAVNLGSFNVMAD 132
+ S V++ +L L +F +A L + P P + + SF+++
Sbjct: 97 RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLR 156
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
+ G+ A+ VF MG+ C P S N L+++L ++G A +YG+M GV P
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLP 216
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
DE+T ++ A RV + +M GL NL Y+ ++ +G ++A+
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276
Query: 253 DIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSK 311
+ + +K L + +Y ++K G+++E +V + + G I E + +
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQ 336
Query: 312 EGREEEVVKL 321
GR ++ ++
Sbjct: 337 RGRMDDATRV 346
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 116/279 (41%), Gaps = 40/279 (14%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ + V YG+L+ G+ +G EA Y E V N+ + + ++++ GK D
Sbjct: 599 GLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV--NNGMNPNVFICSALMSCFYKEGKVD 656
Query: 102 EALKLFDRMKN-EHNPPKRLAV----------------NLGSFNVMAD----GYCGQGRF 140
EA + ++ N + P ++ N S NVM + G C GR
Sbjct: 657 EANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRI 716
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
DA +F + R PD ++++LI +G + EA L M G+ P+ TY L
Sbjct: 717 ADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSL 776
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV----------------GKLVQVGM 244
+ + ++ F K+ G+ PN YN L+ K+V+ G
Sbjct: 777 IYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGY 836
Query: 245 LDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEI 282
++EA D M++ + + +Y ++ G ++EI
Sbjct: 837 MEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEI 875
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+++ ++ G + G LFE L+ K + D Y SL+ G G +EA
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNK--RFLPDNFTYSSLIHGCAASGSIDEAFSLR 758
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ V ++ + + + NS++ LC +GK A+ LF+++++ K ++ N ++N +
Sbjct: 759 D--VMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS-----KGISPNGITYNTL 811
Query: 131 ADGYCGQGR----FK------------DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
D YC +G+ FK +AI++ +M E P+ +++ LI K+G
Sbjct: 812 IDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGN 871
Query: 175 LAEAEELYGEMSDKGVNPDEY 195
+ E +LY EM +G+ P +
Sbjct: 872 MEEISKLYDEMHIRGLLPTNW 892
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 122/303 (40%), Gaps = 72/303 (23%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y L+ G+ ++G+ L+ E+ G+ + + +LM ++ +
Sbjct: 595 MSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNN--GMNPNVFICSALMSCFYKE 652
Query: 61 GMEEEAMECYNEAVGEN-------SSVKMSAVAN-----------------NSVLDALCN 96
G +EA + V + S++++ +++ N ++ LC
Sbjct: 653 GKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCK 712
Query: 97 NGKFDEALKLFDRMKNEHNPPKR------------------------------LAVNLGS 126
+G+ +A LF+ ++N+ P L N+ +
Sbjct: 713 SGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIIT 772
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + G C G+ A+ +F K+ SP+ +++N LID+ CK G EA +L +M
Sbjct: 773 YNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMV 832
Query: 187 DKG----------------VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
++G V+P+ TY L+ + +++ + + +M GL P
Sbjct: 833 EEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNW 892
Query: 231 VYN 233
+ N
Sbjct: 893 IGN 895
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 161/322 (50%), Gaps = 20/322 (6%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVF-RLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
G+ D +V + L+ G R G++ V R E+ +LG VVS Y +L+KG +
Sbjct: 114 GWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLG-VVS----YNTLLKGLCDR 168
Query: 61 GMEEEAMECYNEAV-GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
EEA E + V G++SS V+ N V++ N G+ D+A LF M
Sbjct: 169 RRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMG-------- 220
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ ++ ++N + DG C A +VF++M E P+ +++N +ID LCK + AE
Sbjct: 221 VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAE 280
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
++ +M DKGV P TY ++D + VD F++M+D G++P+ YN ++ L
Sbjct: 281 GVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGL 340
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ +D+A+ F M+ K +K D+ +Y ++ L +D + ++D G +
Sbjct: 341 CKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNN 400
Query: 299 EELQEFVKGELSKEGREEEVVK 320
+ G LS G+ EEVV+
Sbjct: 401 GTYNCLIHGYLST-GQWEEVVQ 421
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 138/292 (47%), Gaps = 22/292 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-----VYGSLMK 55
M KG +Y ++ G+ + G E+ + L +V++G+ ++ +++
Sbjct: 461 MIRKGIKPSVTIYGIMLHGYGKKGA-------LSEMHDLLNLMVANGISPNHRIFNTVIC 513
Query: 56 GYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
Y + M +E M + + + + + V +++DALC G+ D+A+ F++M NE
Sbjct: 514 AYAKRAMIDEVMHIFIKM--KQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGV 571
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P + FN + G C +++ E+F +M PD + FN ++ LCK G +
Sbjct: 572 TPNNVV-----FNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRV 626
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
EA L M G+ PD +Y L+D CF +R+D+ MV +GL+PN+ YN
Sbjct: 627 MEARRLIDSMVCMGLKPDVISYNTLIDGHCF-ASRMDEAVKLLDGMVSAGLKPNIVSYNT 685
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
L+ + G +D A F M++K + +Y ++ L G+ E E+
Sbjct: 686 LLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 10/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + +++ ++ + + D V +F ++K++ G+ + V YG+L+
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQ--GLSPNVVTYGTLIDALCKL 553
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ +N+ + N V + V NS++ LC K+++ +LF M N+ P
Sbjct: 554 GRVDDAVLQFNQMI--NEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRP--- 608
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ FN + C +GR +A + M PD +S+N LID C + EA +
Sbjct: 609 --DIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVK 666
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G+ P+ +Y L+ + R+D+ FR+M+ G+ P + YN ++ L
Sbjct: 667 LLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLF 726
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI 285
+ G EA+ + M+K K+ +Y ++ DE +I
Sbjct: 727 RSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKI 772
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 139/294 (47%), Gaps = 10/294 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V Y+ ++ G + D +F+++ ++ GV D V Y +++ G
Sbjct: 286 MVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDR--GVKPDHVTYNTIIDGLCKA 343
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A + + + + VK + ++D LC D A +F +M ++ P
Sbjct: 344 QAIDKAEGVFQQMI--DKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKP--- 398
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N G++N + GY G++++ ++ ++M + PD ++ L+D LCKNG EA
Sbjct: 399 --NNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARS 456
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M KG+ P YG+++ + + + MV +G+ PN ++N ++
Sbjct: 457 LFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYA 516
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ M+DE F M ++ L + +Y ++ AL G++D+ + ++++G
Sbjct: 517 KRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG 570
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 11/221 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y+ L+ G+ + G D + LF E+ K GV Y +++ G F
Sbjct: 671 MVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRK--GVTPGVETYNTILNGLFRS 728
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSV-LDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G EA E Y + S K+ ++ S+ LD C N FDEA K+F + +
Sbjct: 729 GRFSEARELYVNMI---KSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMD----- 780
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L +++ +FN+M DG GR +DA+++F + P +++ + + L + G L E +
Sbjct: 781 LQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELD 840
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
L+ M G P+ + L+ + + Y K+
Sbjct: 841 CLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKL 881
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 9/273 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + Y+ L+ G D +L + + G+ + V Y +L+ GY
Sbjct: 636 MVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS--AGLKPNIVSYNTLLHGYCKA 693
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A + E + V N++L+ L +G+F EA +L+ M R
Sbjct: 694 GRIDNAYCLFREML--RKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKS-----RK 746
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++++ DG+C F +A ++F+ + D ++FN +ID L K G +A +
Sbjct: 747 LWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMD 806
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ + G+ P TY L+ + E +++ F M SG PN + N L+ KL+
Sbjct: 807 LFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLL 866
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKAL 273
G + A ++ + +K +AS M+ +L
Sbjct: 867 DRGEIPRAGAYLSKLDEKNFSLEASTTSMLISL 899
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 79/193 (40%), Gaps = 10/193 (5%)
Query: 97 NGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM---GEY 153
N +ALKLFD + P A+N +V++ C K A+ F +M
Sbjct: 21 NLGLHDALKLFDELLLHARPASVRALN-QLLSVVSRAKCSSSS-KLAVSRFNRMLRDCSN 78
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
+ +PD +++ +I C+ G L +G + G D+ L+ + RV +
Sbjct: 79 KVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEA 138
Query: 214 -ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV----KKLKMDDASYKF 268
R+M + G R + YN L+ L +EA+ +MV D SY
Sbjct: 139 MHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNI 198
Query: 269 MMKALSDGGKLDE 281
++ + G++D+
Sbjct: 199 VINGFFNEGQVDK 211
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 137/275 (49%), Gaps = 10/275 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
A+ V+Y+ ++ G + D F LF +++ K G+ D Y SL+ G +A
Sbjct: 254 ANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK--GIKPDVFTYNSLISCLCNYGRWSDAS 311
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
++ + + + V NS++DA GK EA KLFD M P N+ ++
Sbjct: 312 RLLSDMI--ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP-----NIVTY 364
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + +G+C R +A ++F M C PD +++N LI CK + E EL+ EMS
Sbjct: 365 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQ 424
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G+ + TY L+ F+ D F+KMV G+ P++ Y+ L+ L + G L++
Sbjct: 425 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 484
Query: 248 AKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDE 281
A F+ + K K++ + +Y M++ + GK+++
Sbjct: 485 ALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVED 519
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D V S L+ G+ L +++ E G D V + +L+ G F+
Sbjct: 146 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM--GYKPDTVTFNTLIHGLFLHNKAS 203
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ + V + +V++ LC G D AL L +M+ ++ N+
Sbjct: 204 EAVALIDRMVARGCQPDL--FTYGTVVNGLCKRGDIDLALSLLKKMEK-----GKIEANV 256
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+N + DG C DA ++F KM PD ++N+LI LC G ++A L +
Sbjct: 257 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSD 316
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++ +NP+ T+ L+DA + ++ + F +M+ + PN+ YN L+
Sbjct: 317 MIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 376
Query: 245 LDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI 285
LDEA+ F +MV K + D +Y ++K +++E +E+
Sbjct: 377 LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMEL 418
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 134/270 (49%), Gaps = 11/270 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ L+ F ++G +LF+E+ ++ + + V Y SL+ G+ M +EA + +
Sbjct: 327 VTFNSLIDAFAKEGKLIEAEKLFDEMIQR--SIDPNIVTYNSLINGFCMHDRLDEAQQIF 384
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
V ++ V N+++ C + +E ++LF M + L N ++N +
Sbjct: 385 TLMVSKDCLP--DVVTYNTLIKGFCKAKRVEEGMELFREMSQ-----RGLVGNTVTYNTL 437
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G G A ++F+KM PD ++++ L+D LCK G L +A ++ + +
Sbjct: 438 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 497
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ YTY ++++ + +V+DG F + G++PN+ +Y ++ + G+ +EA +
Sbjct: 498 EPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 557
Query: 251 FFDIMVKKLKMDDA-SYKFMMKA-LSDGGK 278
F M + + D+ Y +++A L DG K
Sbjct: 558 LFREMKEDGTLPDSGCYNTLIRARLRDGDK 587
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + D V Y+ L+ GF + + LF E+ ++ G+V + V Y +L++G F
Sbjct: 387 MVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQR--GLVGNTVTYNTLIQGLFQA 444
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A + + + V + V + + +LD LC GK ++AL +F+ ++ P
Sbjct: 445 GDCDMAQKIFKKMVSD--GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP--- 499
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N+M +G C G+ +D ++F + P+ + + +I C+ G+ EA+
Sbjct: 500 --NIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 557
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
L+ EM + G PD Y L+ A R+ DG
Sbjct: 558 LFREMKEDGTLPDSGCYNTLIRA-----RLRDG 585
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S + + +L A+ KFD + L ++M+N P N +++++ + +C + +
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPH-----NHYTYSILLNCFCRRSQLPL 134
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ V KM + PD ++ ++L++ C ++EA L +M + G PD T+ L+
Sbjct: 135 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIH 194
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKM 261
F N+ + +MV G +P+L Y +V L + G +D A S M K K++
Sbjct: 195 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 254
Query: 262 DDASYKFMMKALSDGGKLDEILEI 285
+ Y ++ L +D+ ++
Sbjct: 255 NVVIYNTIIDGLCKYKHMDDAFDL 278
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ DA+ +F +M + R P + F+ L+ + K L +M + G+ + YTY
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+L++ +++ KM+ G P++ + L+ + EA + D MV+
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 259 -LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
K D ++ ++ L K E + ++ ++ G V G L K G +
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG-LCKRGDIDL 239
Query: 318 VVKLMEKKEREKAEA 332
+ L++K E+ K EA
Sbjct: 240 ALSLLKKMEKGKIEA 254
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 153/330 (46%), Gaps = 25/330 (7%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+YS ++ G +D + + L+ E+ + + + + Y +L+ + + G A
Sbjct: 151 VMYSAIIDGLCKDKLVNEAYDLYSEMDAR--EIFPNVITYNTLICAFCLAGQLMGAFSLL 208
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+E + +N + + ++DALC GK A ++F M P N+ S+N+M
Sbjct: 209 HEMILKN--INPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNP-----NVYSYNIM 259
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G C R +A+ + R+M PDT+++N+LID LCK+G + A L EM +G
Sbjct: 260 INGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQ 319
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
D TY L+DA + +D F KM + G++P + Y L+ L + G L A+
Sbjct: 320 PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQE 379
Query: 251 FF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
F ++VK +D +Y M+ L G DE L I + D+G I + + ++
Sbjct: 380 LFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS-- 437
Query: 310 SKEGREEEVVKLMEKKEREKAEAKAREAEA 339
L EK E +KAE E A
Sbjct: 438 -----------LFEKDENDKAEKLLHEMIA 456
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 11/220 (5%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+P VYSY ++ G + D L E+ K +V D V Y SL+ G G
Sbjct: 249 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHK--NMVPDTVTYNSLIDGLCKSGRITS 306
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A+ NE + V S+LDALC N D+A LF +MK P +
Sbjct: 307 ALNLMNEM--HHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP-----TMY 359
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ + DG C GR K+A E+F+ + C D ++ +I LCK GM EA + +M
Sbjct: 360 TYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKM 419
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
D G P+ T+ +++ + FE + D +M+ GL
Sbjct: 420 EDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG-DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
M +K D +S L+ ++G ++ +F ++ GV + Y ++ G
Sbjct: 211 MILKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQM-----GVNPNVYSYNIMINGLCK 265
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+EAM E + +N + V NS++D LC +G+ AL L + M + P
Sbjct: 266 CKRVDEAMNLLREMLHKN--MVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPA-- 321
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ ++ + D C A +F KM E P ++ LID LCK G L A+
Sbjct: 322 ---DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQ 378
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ + KG D +TY +++ + D+ KM D+G PN + ++ L
Sbjct: 379 ELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSL 438
Query: 240 VQVGMLDEAKSFFDIMVKK 258
+ D+A+ M+ K
Sbjct: 439 FEKDENDKAEKLLHEMIAK 457
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 113/251 (45%), Gaps = 9/251 (3%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+ + +++ LC G+ + L D++ + N S+ + +G C G +
Sbjct: 79 NTITWTTLMKGLCLKGEVKKLLHFHDKV-----VAQAFQTNQVSYGTLLNGLCKTGETRC 133
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
AI++ R + + P+ + ++ +ID LCK+ ++ EA +LY EM + + P+ TY L+
Sbjct: 134 AIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLIC 193
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
A ++ + +M+ + P++ ++ L+ L + G AK F MV+ +
Sbjct: 194 AFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNP 251
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
+ SY M+ L ++DE + ++ +L + + + G L K GR + L
Sbjct: 252 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDG-LCKSGRITSALNL 310
Query: 322 MEKKEREKAEA 332
M + A
Sbjct: 311 MNEMHHRGQPA 321
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 86/200 (43%), Gaps = 6/200 (3%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
++ + V + +++ C+ G+ + L ++ P N ++ + G C +G
Sbjct: 41 IEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXP-----NTITWTTLMKGLCLKGE 95
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
K + K+ + +S+ L++ LCK G A +L + D+ P+ Y
Sbjct: 96 VKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSA 155
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKK 258
++D + V++ + +M + PN+ YN L+ G L A S ++++K
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKN 215
Query: 259 LKMDDASYKFMMKALSDGGK 278
+ D ++ ++ AL GK
Sbjct: 216 INPDVYTFSILIDALCKEGK 235
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/158 (17%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
NL + +++ + +C G+ + + K+ + P+T+++ L+ LC G + + +
Sbjct: 44 NLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFH 103
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
++ + ++ +YG L++ + R + D RPN+ +Y+ ++ L +
Sbjct: 104 DKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKD 163
Query: 243 GMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKL 279
+++EA + M +++ + +Y ++ A G+L
Sbjct: 164 KLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQL 201
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 165/357 (46%), Gaps = 11/357 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF + V ++ LM G R+G L + + E G+ + YG+++ G K
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED--GLQPTQITYGTIVDGMCKK 232
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A+ + + E S + + V ++++D+LC +G+ +A LF M+ + P
Sbjct: 233 GDTVSALNLLRK-MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP--- 288
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L ++N M G+C GR+ DA ++ ++M E + SPD +++N LI+ K G EAEE
Sbjct: 289 --DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY EM +G+ P+ TY ++D + NR+D F M G PNL +N L+
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+D+ M + L D +Y ++ G L+ L+++ ++ G
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREA-EAAEAAKRSARAAIASLI 355
+ G L G+ ++ +++ + ++ K + A E ++ I+ LI
Sbjct: 467 TCDTLLDG-LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 13/301 (4%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V + + V+YS ++ +DG LF E++EK G+ D Y S++ G+ G
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK--GIFPDLFTYNSMIVGFCSSGR 305
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A + E + + V N++++A GKF EA +L+D M P+ +
Sbjct: 306 WSDAEQLLQEML--ERKISPDVVTYNALINAFVKEGKFFEAEELYDEML-----PRGIIP 358
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +++ M DG+C Q R A +F M CSP+ ++FN LID C + + EL
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM++ G+ D TY L+ + V ++ ++M+ SGL P++ + L+ L
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
G L +A F +M K K DAS+ F + + IL + G++++G +EEL
Sbjct: 479 GKLKDALEMFKVMQKSKKDLDASHPF--NGVEPDVQTYNIL--ISGLINEGKFLEAEELY 534
Query: 303 E 303
E
Sbjct: 535 E 535
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 135/262 (51%), Gaps = 10/262 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + + ++ L+ G+ D L E+ E G+V+D Y +L+ G+++
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET--GLVADTTTYNTLIHGFYLV 443
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEH 114
G A++ E + +S + V +++LD LC+NGK +AL++F M+ +
Sbjct: 444 GDLNAALDLLQEMI--SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
+P + ++ ++N++ G +G+F +A E++ +M PDT++++++ID LCK
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L EA +++ M K +P+ T+ L++ + RVDDG F +M G+ N Y
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 235 LVGKLVQVGMLDEAKSFFDIMV 256
L+ +VG ++ A F M+
Sbjct: 622 LICGFRKVGNINGALDIFQEMI 643
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 135/329 (41%), Gaps = 56/329 (17%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D Y+ +++GF G +L +E+ E+ + D V Y +L+ + +G
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER--KISPDVVTYNALINAFVKEGKF 341
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E Y+E + + + + +S++D C + D A +F M + P N
Sbjct: 342 FEAEELYDEMLPRG--IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-----N 394
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI----------------- 166
L +FN + DGYCG R D +E+ +M E DT ++N LI
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 167 ------------------DQLCKNGMLAEAEELYGEMSDK-----------GVNPDEYTY 197
D LC NG L +A E++ M GV PD TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-V 256
+L+ + + + +M G+ P+ Y+ ++ L + LDEA FD M
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 574
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEI 285
K + ++ ++ G++D+ LE+
Sbjct: 575 KSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 17/243 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VAD Y+ L+ GF GD + L +E+ G+ D V +L+ G G +
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS--GLCPDIVTCDTLLDGLCDNGKLK 482
Query: 65 EAMECYN---------EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
+A+E + +A + V+ N ++ L N GKF EA +L++ M
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM----- 537
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P + + + +++ M DG C Q R +A ++F MG SP+ ++F LI+ CK G +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN-LAVYNR 234
+ EL+ EM +G+ + TY L+ +V ++ F++M+ SG+ P+ + + N
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Query: 235 LVG 237
L G
Sbjct: 658 LTG 660
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 7/208 (3%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E ++ + ++ C+ K AL F ++ P ++ +FN + G C
Sbjct: 106 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHP-----DVVTFNTLLHGLC 160
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+ R +A+ +F +M E C P+ ++F L++ LC+ G + EA L M + G+ P +
Sbjct: 161 VEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVD-SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
TYG ++D + RKM + S + PN+ +Y+ ++ L + G +A++ F
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 255 MVKK-LKMDDASYKFMMKALSDGGKLDE 281
M +K + D +Y M+ G+ +
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSD 308
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 82/185 (44%), Gaps = 1/185 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
I +++KM + D SF LI C L A +G+++ G++PD T+ L+
Sbjct: 98 VISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLH 157
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+RV + F +M ++ RPN+ + L+ L + G + EA + D M++ L+
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
+Y ++ + G L ++ + + I + + + L K+GR + L
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 322 MEKKE 326
+ +
Sbjct: 278 FTEMQ 282
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 51/213 (23%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKL------GGVVSDGVVYG 51
M G D V L+ G +G D+ +F++ ++ K+ L GV D Y
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 52 SLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK 111
L+ G +G EA E Y E + + + +S++D LC + DEA ++FD M
Sbjct: 516 ILISGLINEGKFLEAEELYEEM--PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 112 NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE----------------YR- 154
++ P N+ +F + +GYC GR D +E+F +MG +R
Sbjct: 574 SKSFSP-----NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 155 ------------------CSPDTLSFNNLIDQL 169
PDT++ N++ L
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 165/357 (46%), Gaps = 11/357 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF + V ++ LM G R+G L + + E G+ + YG+++ G K
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED--GLQPTQITYGTIVDGMCKK 232
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A+ + + E S + + V ++++D+LC +G+ +A LF M+ + P
Sbjct: 233 GDTVSALNLLRK-MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP--- 288
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L ++N M G+C GR+ DA ++ ++M E + SPD +++N LI+ K G EAEE
Sbjct: 289 --DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY EM +G+ P+ TY ++D + NR+D F M G PNL +N L+
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+D+ M + L D +Y ++ G L+ L+++ ++ G
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREA-EAAEAAKRSARAAIASLI 355
+ G L G+ ++ +++ + ++ K + A E ++ I+ LI
Sbjct: 467 TCDTLLDG-LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 13/301 (4%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V + + V+YS ++ +DG LF E++EK G+ D Y S++ G+ G
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK--GIFPDLFTYNSMIVGFCSSGR 305
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A + E + + V N++++A GKF EA +L+D M P+ +
Sbjct: 306 WSDAEQLLQEML--ERKISPDVVTYNALINAFVKEGKFFEAEELYDEML-----PRGIIP 358
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +++ M DG+C Q R A +F M CSP+ ++FN LID C + + EL
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM++ G+ D TY L+ + V ++ ++M+ SGL P++ + L+ L
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
G L +A F +M K K DAS+ F + + IL + G++++G +EEL
Sbjct: 479 GKLKDALEMFKVMQKSKKDLDASHPF--NGVEPDVQTYNIL--ISGLINEGKFLEAEELY 534
Query: 303 E 303
E
Sbjct: 535 E 535
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 135/262 (51%), Gaps = 10/262 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + + ++ L+ G+ D L E+ E G+V+D Y +L+ G+++
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET--GLVADTTTYNTLIHGFYLV 443
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEH 114
G A++ E + +S + V +++LD LC+NGK +AL++F M+ +
Sbjct: 444 GDLNAALDLLQEMI--SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
+P + ++ ++N++ G +G+F +A E++ +M PDT++++++ID LCK
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L EA +++ M K +P+ T+ L++ + RVDDG F +M G+ N Y
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 235 LVGKLVQVGMLDEAKSFFDIMV 256
L+ +VG ++ A F M+
Sbjct: 622 LICGFRKVGNINGALDIFQEMI 643
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 135/329 (41%), Gaps = 56/329 (17%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D Y+ +++GF G +L +E+ E+ + D V Y +L+ + +G
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER--KISPDVVTYNALINAFVKEGKF 341
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E Y+E + + + + +S++D C + D A +F M + P N
Sbjct: 342 FEAEELYDEMLPRG--IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-----N 394
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI----------------- 166
L +FN + DGYCG R D +E+ +M E DT ++N LI
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 167 ------------------DQLCKNGMLAEAEELYGEMSDK-----------GVNPDEYTY 197
D LC NG L +A E++ M GV PD TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-V 256
+L+ + + + +M G+ P+ Y+ ++ L + LDEA FD M
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 574
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEI 285
K + ++ ++ G++D+ LE+
Sbjct: 575 KSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 17/243 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VAD Y+ L+ GF GD + L +E+ G+ D V +L+ G G +
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS--GLCPDIVTCDTLLDGLCDNGKLK 482
Query: 65 EAMECYN---------EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
+A+E + +A + V+ N ++ L N GKF EA +L++ M
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM----- 537
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P + + + +++ M DG C Q R +A ++F MG SP+ ++F LI+ CK G +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN-LAVYNR 234
+ EL+ EM +G+ + TY L+ +V ++ F++M+ SG+ P+ + + N
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Query: 235 LVG 237
L G
Sbjct: 658 LTG 660
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 7/208 (3%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E ++ + N ++ C+ K AL F ++ P ++ +F + G C
Sbjct: 106 ERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP-----DVVTFTTLLHGLC 160
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+ R +A+ +F +M E C P+ ++F L++ LC+ G + EA L M + G+ P +
Sbjct: 161 VEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVD-SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
TYG ++D + RKM + S + PN+ +Y+ ++ L + G +A++ F
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 255 MVKK-LKMDDASYKFMMKALSDGGKLDE 281
M +K + D +Y M+ G+ +
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSD 308
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 1/185 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
I +++KM + D SFN LI C L A +G+++ G++PD T+ L+
Sbjct: 98 VISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH 157
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+RV + F +M ++ RPN+ + L+ L + G + EA + D M++ L+
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
+Y ++ + G L ++ + + I + + + L K+GR + L
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 322 MEKKE 326
+ +
Sbjct: 278 FTEMQ 282
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 51/213 (23%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKL------GGVVSDGVVYG 51
M G D V L+ G +G D+ +F++ ++ K+ L GV D Y
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 52 SLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK 111
L+ G +G EA E Y E + + + +S++D LC + DEA ++FD M
Sbjct: 516 ILISGLINEGKFLEAEELYEEM--PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 112 NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE----------------YR- 154
++ P N+ +F + +GYC GR D +E+F +MG +R
Sbjct: 574 SKSFSP-----NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 155 ------------------CSPDTLSFNNLIDQL 169
PDT++ N++ L
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 165/357 (46%), Gaps = 11/357 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF + V ++ LM G R+G L + + E G+ + YG+++ G K
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED--GLQPTQITYGTIVDGMCKK 232
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A+ + + E S + + V ++++D+LC +G+ +A LF M+ + P
Sbjct: 233 GDTVSALNLLRK-MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP--- 288
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L ++N M G+C GR+ DA ++ ++M E + SPD +++N LI+ K G EAEE
Sbjct: 289 --DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY EM +G+ P+ TY ++D + NR+D F M G PNL +N L+
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+D+ M + L D +Y ++ G L+ L+++ ++ G
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREA-EAAEAAKRSARAAIASLI 355
+ G L G+ ++ +++ + ++ K + A E ++ I+ LI
Sbjct: 467 TCDTLLDG-LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 13/301 (4%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V + + V+YS ++ +DG LF E++EK G+ D Y S++ G+ G
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK--GIFPDLFTYNSMIVGFCSSGR 305
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A + E + + V N++++A GKF EA +L+D M P+ +
Sbjct: 306 WSDAEQLLQEML--ERKISPDVVTYNALINAFVKEGKFFEAEELYDEML-----PRGIIP 358
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +++ M DG+C Q R A +F M CSP+ ++FN LID C + + EL
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM++ G+ D TY L+ + V ++ ++M+ SGL P++ + L+ L
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
G L +A F +M K K DAS+ F + + IL + G++++G +EEL
Sbjct: 479 GKLKDALEMFKVMQKSKKDLDASHPF--NGVEPDVQTYNIL--ISGLINEGKFLEAEELY 534
Query: 303 E 303
E
Sbjct: 535 E 535
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 135/262 (51%), Gaps = 10/262 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + + ++ L+ G+ D L E+ E G+V+D Y +L+ G+++
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET--GLVADTTTYNTLIHGFYLV 443
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEH 114
G A++ E + +S + V +++LD LC+NGK +AL++F M+ +
Sbjct: 444 GDLNAALDLLQEMI--SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
+P + ++ ++N++ G +G+F +A E++ +M PDT++++++ID LCK
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L EA +++ M K +P+ T+ L++ + RVDDG F +M G+ N Y
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 235 LVGKLVQVGMLDEAKSFFDIMV 256
L+ +VG ++ A F M+
Sbjct: 622 LICGFRKVGNINGALDIFQEMI 643
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 135/329 (41%), Gaps = 56/329 (17%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D Y+ +++GF G +L +E+ E+ + D V Y +L+ + +G
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER--KISPDVVTYNALINAFVKEGKF 341
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E Y+E + + + + +S++D C + D A +F M + P N
Sbjct: 342 FEAEELYDEMLPRG--IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-----N 394
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI----------------- 166
L +FN + DGYCG R D +E+ +M E DT ++N LI
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 167 ------------------DQLCKNGMLAEAEELYGEMSDK-----------GVNPDEYTY 197
D LC NG L +A E++ M GV PD TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-V 256
+L+ + + + +M G+ P+ Y+ ++ L + LDEA FD M
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 574
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEI 285
K + ++ ++ G++D+ LE+
Sbjct: 575 KSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 17/243 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VAD Y+ L+ GF GD + L +E+ G+ D V +L+ G G +
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS--GLCPDIVTCDTLLDGLCDNGKLK 482
Query: 65 EAMECYN---------EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
+A+E + +A + V+ N ++ L N GKF EA +L++ M
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM----- 537
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P + + + +++ M DG C Q R +A ++F MG SP+ ++F LI+ CK G +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN-LAVYNR 234
+ EL+ EM +G+ + TY L+ +V ++ F++M+ SG+ P+ + + N
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Query: 235 LVG 237
L G
Sbjct: 658 LTG 660
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 7/208 (3%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E ++ + ++ C+ K AL F ++ P ++ +FN + G C
Sbjct: 106 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHP-----DVVTFNTLLHGLC 160
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+ R +A+ +F +M E C P+ ++F L++ LC+ G + EA L M + G+ P +
Sbjct: 161 VEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVD-SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
TYG ++D + RKM + S + PN+ +Y+ ++ L + G +A++ F
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 255 MVKK-LKMDDASYKFMMKALSDGGKLDE 281
M +K + D +Y M+ G+ +
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSD 308
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 82/185 (44%), Gaps = 1/185 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
I +++KM + D SF LI C L A +G+++ G++PD T+ L+
Sbjct: 98 VISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLH 157
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+RV + F +M ++ RPN+ + L+ L + G + EA + D M++ L+
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
+Y ++ + G L ++ + + I + + + L K+GR + L
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 322 MEKKE 326
+ +
Sbjct: 278 FTEMQ 282
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 51/213 (23%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKL------GGVVSDGVVYG 51
M G D V L+ G +G D+ +F++ ++ K+ L GV D Y
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 52 SLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK 111
L+ G +G EA E Y E + + + +S++D LC + DEA ++FD M
Sbjct: 516 ILISGLINEGKFLEAEELYEEM--PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 112 NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE----------------YR- 154
++ P N+ +F + +GYC GR D +E+F +MG +R
Sbjct: 574 SKSFSP-----NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 155 ------------------CSPDTLSFNNLIDQL 169
PDT++ N++ L
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 149/308 (48%), Gaps = 11/308 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ L+ G+ +DG + R+ +E+KE G +V D V YG ++ GY +G
Sbjct: 282 KGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKET-GDIVVDEVAYGMMINGYCQRGRM 340
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A NE ++ + ++ N++++ LC G+ +E K+ M++ P +
Sbjct: 341 DDATRVRNEM--RDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKY--- 395
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N + DGYC +G + A E+ R M + TL++N L+ C + +A L+
Sbjct: 396 --SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +GV P+E + L+D F+ + + +++ + GL N+ +N ++ L ++G
Sbjct: 454 LMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIG 513
Query: 244 MLDEAKSFFDIMVKKLKM--DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+ EA+ D M K+L+ D +Y+ + G+L ++ + G E
Sbjct: 514 RMAEAEELLDRM-KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMF 572
Query: 302 QEFVKGEL 309
F+ G
Sbjct: 573 NSFITGHF 580
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 156/388 (40%), Gaps = 72/388 (18%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G A + Y+ L+ GF D RL+ + ++ GV + + +L+ G F
Sbjct: 420 MVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKR--GVAPNEISCSTLLDGLFKA 477
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A+ + E + + + + N+V++ LC G+ EA +L DRMK PP L
Sbjct: 478 GKTEQALNLWKETLAR--GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSL 535
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKM-----------------GEYRC-------- 155
++ + DGYC G+ A + KM G +
Sbjct: 536 -----TYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVND 590
Query: 156 ----------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
SP+ +++ LI CK G L EA LY EM + G+NP+ + LM +
Sbjct: 591 IHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFY 650
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAV--------------------------YNRLVGKL 239
+ +VD+ +K+V+ + P ++ +N ++ L
Sbjct: 651 KEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGL 710
Query: 240 VQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ G + +AKS F+ + K+ D+ +Y ++ + G +DE + +L G
Sbjct: 711 CKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNI 770
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKE 326
+ G L K G+ V L K +
Sbjct: 771 ITYNSLIYG-LCKSGKLSRAVNLFNKLQ 797
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 145/325 (44%), Gaps = 10/325 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G + D + + + RDG EE++ G+ + V Y ++M Y
Sbjct: 209 MRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGM--GLEVNLVAYHAVMDCYCGM 266
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A + + + V ++ C +G+ +EA ++ MK + +
Sbjct: 267 GWTEDARRILESL--QRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGD----I 320
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
V+ ++ +M +GYC +GR DA V +M + + +N +I+ LCK G + E ++
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EM D G+ PD+Y+Y L+D + R MV +GL YN L+
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFC 440
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ +D+A + +M+K+ + ++ S ++ L GK ++ L + L G +
Sbjct: 441 SLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVI 500
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+ G L K GR E +L+++
Sbjct: 501 TFNTVING-LCKIGRMAEAEELLDR 524
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 143/307 (46%), Gaps = 32/307 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y L+ G+ ++G+ L+ E+ G+ + + +LM ++ +
Sbjct: 595 MSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNN--GMNPNVFICSALMSCFYKE 652
Query: 61 GMEEEAMECYNEAVGEN-------SSVKMSAVAN-----------------NSVLDALCN 96
G +EA + V + S++++ +++ N ++ LC
Sbjct: 653 GKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCK 712
Query: 97 NGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
+G+ +A LF+ ++N KR + +++ + G G +A + M +
Sbjct: 713 SGRIADAKSLFESLRN-----KRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLT 767
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P+ +++N+LI LCK+G L+ A L+ ++ KG++P+ TY L+D + + +
Sbjct: 768 PNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKL 827
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSD 275
+KMV+ G++P + Y+ L+ L G ++EA D M++ + + +Y ++
Sbjct: 828 KQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIK 887
Query: 276 GGKLDEI 282
G ++EI
Sbjct: 888 SGNMEEI 894
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 110/218 (50%), Gaps = 9/218 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+++ ++ G + G LFE L+ K + D Y SL+ G G +EA
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNK--RFLPDNFTYSSLIHGCAASGSIDEAFSLR 758
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ V ++ + + + NS++ LC +GK A+ LF+++++ K ++ N ++N +
Sbjct: 759 D--VMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS-----KGISPNGITYNTL 811
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
D YC +G+ +A ++ +KM E P ++++ LI LC G + EA +L +M + V
Sbjct: 812 IDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNV 871
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
+P+ TY L+ + +++ + + +M GL P
Sbjct: 872 DPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 909
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 9/192 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K F+ D YS L+ G G D F L + + G+ + + Y SL+ G G
Sbjct: 729 KRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS--AGLTPNIITYNSLIYGLCKSGKL 786
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A+ +N+ ++ + + + N+++D C GK EA KL +M E P +
Sbjct: 787 SRAVNLFNKL--QSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVI--- 841
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++++ G C QG ++AI++ +M E P+ +++ LI K+G + E +LY
Sbjct: 842 --TYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYD 899
Query: 184 EMSDKGVNPDEY 195
EM +G+ P +
Sbjct: 900 EMHIRGLLPTNW 911
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 9/250 (3%)
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP--P------KRLAVNLGSFNVMAD 132
+ S V++ +L L +F +A L + P P + + SF+++
Sbjct: 97 RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLR 156
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
+ G+ A+ VF MG+ C P S N L+++L ++G A +YG+M GV P
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLP 216
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
DE+T ++ A RV + +M GL NL Y+ ++ +G ++A+
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276
Query: 253 DIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSK 311
+ + +K L + +Y ++K G+++E +V + + G I E + +
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQ 336
Query: 312 EGREEEVVKL 321
GR ++ ++
Sbjct: 337 RGRMDDATRV 346
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 165/357 (46%), Gaps = 11/357 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF + V ++ LM G R+G L + + E G+ + YG+++ G K
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED--GLQPTQITYGTIVDGMCKK 232
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A+ + + E S + + V ++++D+LC +G+ +A LF M+ + P
Sbjct: 233 GDTVSALNLLRK-MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP--- 288
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L ++N M G+C GR+ DA ++ ++M E + SPD +++N LI+ K G EAEE
Sbjct: 289 --DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY EM +G+ P+ TY ++D + NR+D F M G PNL +N L+
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+D+ M + L D +Y ++ G L+ L+++ ++ G
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREA-EAAEAAKRSARAAIASLI 355
+ G L G+ ++ +++ + ++ K + A E ++ I+ LI
Sbjct: 467 TCDTLLDG-LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 13/301 (4%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V + + V+YS ++ +DG LF E++EK G+ D Y S++ G+ G
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK--GIFPDLFTYNSMIVGFCSSGR 305
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A + E + + V N++++A GKF EA +L+D M P+ +
Sbjct: 306 WSDAEQLLQEML--ERKISPDVVTYNALINAFVKEGKFFEAEELYDEML-----PRGIIP 358
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +++ M DG+C Q R A +F M CSP+ ++FN LID C + + EL
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM++ G+ D TY L+ + V ++ ++M+ SGL P++ + L+ L
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
G L +A F +M K K DAS+ F + + IL + G++++G +EEL
Sbjct: 479 GKLKDALEMFKVMQKSKKDLDASHPF--NGVEPDVQTYNIL--ISGLINEGKFLEAEELY 534
Query: 303 E 303
E
Sbjct: 535 E 535
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 135/262 (51%), Gaps = 10/262 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + + ++ L+ G+ D L E+ E G+V+D Y +L+ G+++
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET--GLVADTTTYNTLIHGFYLV 443
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEH 114
G A++ E + +S + V +++LD LC+NGK +AL++F M+ +
Sbjct: 444 GDLNAALDLLQEMI--SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
+P + ++ ++N++ G +G+F +A E++ +M PDT++++++ID LCK
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L EA +++ M K +P+ T+ L++ + RVDDG F +M G+ N Y
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 235 LVGKLVQVGMLDEAKSFFDIMV 256
L+ +VG ++ A F M+
Sbjct: 622 LICGFRKVGNINGALDIFQEMI 643
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 135/329 (41%), Gaps = 56/329 (17%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D Y+ +++GF G +L +E+ E+ + D V Y +L+ + +G
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER--KISPDVVTYNALINAFVKEGKF 341
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E Y+E + + + + +S++D C + D A +F M + P N
Sbjct: 342 FEAEELYDEMLPRG--IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-----N 394
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI----------------- 166
L +FN + DGYCG R D +E+ +M E DT ++N LI
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 167 ------------------DQLCKNGMLAEAEELYGEMSDK-----------GVNPDEYTY 197
D LC NG L +A E++ M GV PD TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-V 256
+L+ + + + +M G+ P+ Y+ ++ L + LDEA FD M
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 574
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEI 285
K + ++ ++ G++D+ LE+
Sbjct: 575 KSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 17/243 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VAD Y+ L+ GF GD + L +E+ G+ D V +L+ G G +
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS--GLCPDIVTCDTLLDGLCDNGKLK 482
Query: 65 EAMECYN---------EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
+A+E + +A + V+ N ++ L N GKF EA +L++ M
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM----- 537
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P + + + +++ M DG C Q R +A ++F MG SP+ ++F LI+ CK G +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN-LAVYNR 234
+ EL+ EM +G+ + TY L+ +V ++ F++M+ SG+ P+ + + N
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Query: 235 LVG 237
L G
Sbjct: 658 LTG 660
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 7/208 (3%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E ++ + N ++ C+ K AL F ++ P ++ +F + G C
Sbjct: 106 ERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP-----DVVTFTTLLHGLC 160
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+ R +A++ F +M E C P+ ++F L++ LC+ G + EA L M + G+ P +
Sbjct: 161 VEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVD-SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
TYG ++D + RKM + S + PN+ +Y+ ++ L + G +A++ F
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 255 MVKK-LKMDDASYKFMMKALSDGGKLDE 281
M +K + D +Y M+ G+ +
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSD 308
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
I +++KM + D SFN LI C L A +G+++ G++PD T+ L+
Sbjct: 98 VISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH 157
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+RV + +F +M ++ RPN+ + L+ L + G + EA + D M++ L+
Sbjct: 158 GLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
+Y ++ + G L ++ + + I + + + L K+GR + L
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 322 MEKKE 326
+ +
Sbjct: 278 FTEMQ 282
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 51/213 (23%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKL------GGVVSDGVVYG 51
M G D V L+ G +G D+ +F++ ++ K+ L GV D Y
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 52 SLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK 111
L+ G +G EA E Y E + + + +S++D LC + DEA ++FD M
Sbjct: 516 ILISGLINEGKFLEAEELYEEM--PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 112 NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE----------------YR- 154
++ P N+ +F + +GYC GR D +E+F +MG +R
Sbjct: 574 SKSFSP-----NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 155 ------------------CSPDTLSFNNLIDQL 169
PDT++ N++ L
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 165/345 (47%), Gaps = 27/345 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG-- 61
KGF + V Y+ ++ + G + F ++ + G+ D + + SL+ G G
Sbjct: 324 KGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSE--GLSPDIITFTSLIHGLCTIGEW 381
Query: 62 --MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+E+ + E N + N A+ N+++D+LC G+ EA FD++ + P
Sbjct: 382 KKVEKLSFEMINRGIHPN------AIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKP-- 433
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ S+ ++ DGYC G+ ++I++ +M PD ++++ L++ CKNG + +A
Sbjct: 434 ---DVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDAL 490
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
LY EM K V P+ TY +++ F RV ++ K+VDSG++ + YN ++G L
Sbjct: 491 ALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGL 550
Query: 240 VQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----G 294
+ +DEA F + K+ +++ ++ M+ L G++ + + IL G
Sbjct: 551 CENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDA 610
Query: 295 IEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
I + +Q + +EG EE +L E+ A +R A
Sbjct: 611 IIYGLMIQSHI-----EEGLLEESDELFLSMEKNGCTANSRTLNA 650
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 128/285 (44%), Gaps = 25/285 (8%)
Query: 50 YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALC-------------- 95
Y ++ G F +G ++A ++E +G+ + V NSV+D LC
Sbjct: 142 YNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNI--VTYNSVIDGLCKAQAMDKAEAVLQQ 199
Query: 96 --NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
+ G+ +EA++L +M P ++ +++++ D YC GR +A +F M
Sbjct: 200 MFDKGQLEEAVRLLKKMSGGGLQP-----DVVTYSLLIDYYCKIGRCTEARNIFDSMVRR 254
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
+PD ++ L+ G L + +L M G+ +++ + +L+ A + +D
Sbjct: 255 GQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKA 314
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKA 272
T F +M G PN+ Y ++ L + G +++A S F MV + L D ++ ++
Sbjct: 315 MTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHG 374
Query: 273 LSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
L G+ ++ E + + + GI + + L KEGR E
Sbjct: 375 LCTIGEWKKV-EKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLE 418
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 121/262 (46%), Gaps = 15/262 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G+ DG D +L + G+ D V Y +L+ GY G +
Sbjct: 430 GVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSI--GLRPDNVTYSALLNGYCKNGRVD 487
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ Y E ++ VK +A+ N +L L + G+ A + + ++ + + + +
Sbjct: 488 DALALYREMFSKD--VKPNAITYNIILHGLFHAGRVVAAREFYMKIVDS-----GIQLGI 540
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ G C +A+ +F+ + + +FN +I L K G + +A+ L+
Sbjct: 541 NTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSA 600
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ G+ PD YGL++ + E +++ F M +G N N +V KL++ G
Sbjct: 601 ILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGD 660
Query: 245 LDEAKSFFDIMVKKLKMDDASY 266
+ A ++ K+D+ Y
Sbjct: 661 VRRAGTYLT------KIDEKEY 676
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 105/218 (48%), Gaps = 29/218 (13%)
Query: 103 ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE--------VFRKMGE-- 152
A+ LF+ M +LA + +F ++ +C G A+E M +
Sbjct: 75 AVSLFNTMAQV--GVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDG 132
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-C------- 204
Y C P+ LS+N +I+ L K G + +A L+ EM +G P+ TY ++D C
Sbjct: 133 YNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDK 192
Query: 205 --------FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
F+ ++++ +KM GL+P++ Y+ L+ ++G EA++ FD MV
Sbjct: 193 AEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMV 252
Query: 257 KKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
++ + DA +Y+ ++ + G L ++ +++ ++ DG
Sbjct: 253 RRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDG 290
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 164/352 (46%), Gaps = 41/352 (11%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + YS L+ GF + D +RL +E++++ G+V VY +++KG G + A+
Sbjct: 32 DSITYSTLINGFCKARDFQQAYRLLDEMEKR--GIVPHNAVYNTIIKGLCDNGRVDSALV 89
Query: 69 CYN-----------------EAVGENSSVK---------------MSAVANNSVLDALCN 96
Y +A+ +++ + + V N++++ C
Sbjct: 90 HYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149
Query: 97 NGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
G DEA+ LF++M P ++ ++N++ DGYC Q R +D ++ ++M +Y C
Sbjct: 150 LGNMDEAVVLFNQMLENSCSP-----DVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE 204
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P+ +++N L+D L K+G +A L M + P +T+ L++D +V ++D
Sbjct: 205 PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 264
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSD 275
F+ M D G P++ YN ++ + +D+A+ + M + D +Y ++ L
Sbjct: 265 FQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCK 324
Query: 276 GGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
++DE E V +L +GG + L K R ++ KL+ + ER
Sbjct: 325 ASQVDEAYE-VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 375
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 146/311 (46%), Gaps = 14/311 (4%)
Query: 16 LMLGFVRDGDSDGVFRLFEELKEKLGGVVS-DGVVYGSLMKGYFMKGMEEEAMECYNEAV 74
L+ FVR + + LF K L G+ S D + Y +L+ G+ ++A +E
Sbjct: 4 LLSAFVRKKKAQEAYDLF---KNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM- 59
Query: 75 GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGY 134
E + N+++ LC+NG+ D AL + M+ P ++ ++ ++ D
Sbjct: 60 -EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAP------SVITYTILVDAL 112
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C R DA + M E C+P+ +++N LI+ CK G + EA L+ +M + +PD
Sbjct: 113 CKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDV 172
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
+TY +L+D + R DGA ++MV G PN YN L+ LV+ G +A + +
Sbjct: 173 FTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQM 232
Query: 255 MVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
M+++ K ++ M+ G+LD E+ + D G + + G +
Sbjct: 233 MLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGA-CRAN 291
Query: 314 REEEVVKLMEK 324
R ++ +L+E+
Sbjct: 292 RIDDARQLLER 302
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 121/288 (42%), Gaps = 34/288 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y+ L+ GF + G+ D LF ++ E D Y L+ GY +
Sbjct: 128 MIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLE--NSCSPDVFTYNILIDGYCKQ 185
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++ + E V + + + N+++D+L +GK+ +A L M P
Sbjct: 186 ERPQDGAKLLQEMV--KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHF 243
Query: 121 AVNL------------------------------GSFNVMADGYCGQGRFKDAIEVFRKM 150
NL ++N+M G C R DA ++ +M
Sbjct: 244 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM 303
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E C PD +++N+++ LCK + EA E+Y + + G D T L+D + R+
Sbjct: 304 TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRL 363
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
DD R+M +G P++ Y L+ + LD++ +FF M+ K
Sbjct: 364 DDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK 411
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
F + G D + LF+ + ++ G + D Y ++ G ++A + E + E +
Sbjct: 252 FCKVGQLDLAYELFQLMTDR--GCLPDIYTYNIMISGACRANRIDDARQ-LLERMTE-AG 307
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
V NS++ LC + DEA ++++ ++N +++ + + + DG C R
Sbjct: 308 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG-----YFLDVVTCSTLIDGLCKSRR 362
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
DA ++ R+M +PD +++ LI CK L ++ + EM DKG P TY +
Sbjct: 363 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 422
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGL 225
++D + RV DG + M++ G+
Sbjct: 423 VIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 37/183 (20%)
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + + + + ++A ++F+ CSPD+++++ LI+ CK +A L EM
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 188 KGVNPDE----------------------------------YTYGLLMDACFEVNRVDDG 213
+G+ P TY +L+DA + R+ D
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDA 121
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKAL 273
+ M+++G PN+ YN L+ ++G +DEA F+ M++ D F L
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDV---FTYNIL 178
Query: 274 SDG 276
DG
Sbjct: 179 IDG 181
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 144/322 (44%), Gaps = 10/322 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ LM G +GD D L L G V Y +++KG
Sbjct: 68 MRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSH--GCKPSTVNYNTVLKGLCSA 125
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A E E + EN + N V+ +LC G +A++L ++M ++H
Sbjct: 126 ERWGDADELVTEMLRENCPPNEATF--NVVIYSLCRKGLLQQAIQLLEKM-SKHG----C 178
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N + +G C Q A+ + KM Y C PD +++N L+ LC +AEE
Sbjct: 179 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEE 238
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M+ G PD T+ L+ + + D F++M D G PN Y+ ++ L
Sbjct: 239 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 298
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+ LD+A F+ M K D Y+ + + L+D ++E ++ V L D GI
Sbjct: 299 KATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRK-LQDSGISPHTV 357
Query: 301 LQEFVKGELSKEGREEEVVKLM 322
L + L + G+ E + +M
Sbjct: 358 LYNAILLGLCRNGKTEFAIDIM 379
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 139/277 (50%), Gaps = 16/277 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+YS R G +L E++ + G ++ V Y +++ G + + AM
Sbjct: 153 VIYS-----LCRKGLLQQAIQLLEKMSKH--GCTANIVTYNAIINGLCEQRNVDGAMGLL 205
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
++ ++ K V N++L LC+ ++ +A +L D M P + +FN +
Sbjct: 206 SKM--KSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNV-----TFNTL 258
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
C +G DAIEVF++M + C+P++++++ +I L K L +A EL+ EM KG
Sbjct: 259 IGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGF 318
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
NPD+ Y LL + + + +++ RK+ DSG+ P+ +YN ++ L + G + A
Sbjct: 319 NPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 377
Query: 251 FFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIV 286
MV M DD +Y +++ L+ G L+E E++
Sbjct: 378 IMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 414
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 6/203 (2%)
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQG 138
V+ +A N ++ LC G+ +AL + D M P ++ ++N++ + C
Sbjct: 2 PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAP-----DVVTYNILLEATCKGR 56
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
++ A+E+ M C+P+ +++N L+D +C G + +A EL + G P Y
Sbjct: 57 GYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYN 116
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
++ R D +M+ PN A +N ++ L + G+L +A + M K
Sbjct: 117 TVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKH 176
Query: 259 -LKMDDASYKFMMKALSDGGKLD 280
+ +Y ++ L + +D
Sbjct: 177 GCTANIVTYNAIINGLCEQRNVD 199
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N ++N + C +G+ +DA+ V M C+PD +++N L++ CK +A EL
Sbjct: 6 NAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELI 65
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M +G P+ TY +LMD VDD R + G +P+ YN ++ L
Sbjct: 66 DLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSA 125
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+A M+++ ++A++ ++ +L G L + ++++
Sbjct: 126 ERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLL 170
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 33/215 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G L + + + G + D V + +L+ KG+
Sbjct: 212 GCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQN--GCLPDNVTFNTLIGFLCQKGLMV 269
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE-HNPPKR---- 119
+A+E + + + +++ ++++ L K D+AL+LF+ M ++ NP K
Sbjct: 270 DAIEVFKQM--PDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLL 327
Query: 120 ------------------------LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
++ + +N + G C G+ + AI++ M C
Sbjct: 328 AECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGC 387
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
PD L++ LI+ L G L EA EL ++ + V
Sbjct: 388 MPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV 422
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 160/364 (43%), Gaps = 49/364 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + D + + L+ GF R G + R+ E L+ G V D + Y L+ GY
Sbjct: 132 MIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN--SGAVPDVITYNVLIGGYCKS 189
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+E V E SV V N++L +LC++GK EA+++ DR P
Sbjct: 190 GEIDKALE-----VLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYP--- 241
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ ++ + C A+++ +M + C PD +++N LI+ +CK G L EA +
Sbjct: 242 --DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIK 299
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN------- 233
M G P+ T+ +++ + R D M+ G P++ +N
Sbjct: 300 FLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLC 359
Query: 234 --RLVGKLVQV--------------------------GMLDEAKSFFDIMVKK-LKMDDA 264
RL+G+ + V +D A + +IMV + D
Sbjct: 360 RKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIV 419
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+Y ++ AL GK+D +EI+ + G + G L+K G+ E V+L+E+
Sbjct: 420 TYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDG-LTKVGKTEYAVELLEE 478
Query: 325 KERE 328
R+
Sbjct: 479 MRRK 482
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 141/317 (44%), Gaps = 35/317 (11%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D + Y+ L+ D +L +E+++K G D V Y L+ G +G +EA+
Sbjct: 241 PDVITYTILIEATCNDSGVGQAMKLLDEMRKK--GCKPDVVTYNVLINGICKEGRLDEAI 298
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN---- 123
+ N + K + + +N +L ++C+ G++ +A +L M + P + N
Sbjct: 299 KFLNNM--PSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILIN 356
Query: 124 -------LG-------------------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
LG S+N + G+C + + AIE M C P
Sbjct: 357 FLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 416
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
D +++N L+ LCK+G + A E+ ++S KG +P TY ++D +V + +
Sbjct: 417 DIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELL 476
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDG 276
+M GL+P++ Y+ L+ L + G +DEA K F D+ +K +Y +M L
Sbjct: 477 EEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKA 536
Query: 277 GKLDEILEIVGGILDDG 293
+ ++ + +++ G
Sbjct: 537 QQTSRAIDFLAYMVEKG 553
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 117/239 (48%), Gaps = 12/239 (5%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
VR+G+ + + E + + G + D + SL++G+ G ++A + ENS
Sbjct: 116 LVRNGELEEGLKFLERMIYQ--GDIPDVIACTSLIRGFCRSGKTKKATRIME--ILENSG 171
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ N ++ C +G+ D+AL++ +RM +A ++ ++N + C G+
Sbjct: 172 AVPDVITYNVLIGGYCKSGEIDKALEVLERMS--------VAPDVVTYNTILRSLCDSGK 223
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
K+A+EV + + C PD +++ LI+ C + + +A +L EM KG PD TY +
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
L++ + R+D+ + M G +PN+ +N ++ + G +A+ M++K
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRK 342
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 6/194 (3%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
++++ N +L C K D A++ + M + P ++ ++N + C G+
Sbjct: 382 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP-----DIVTYNTLLTALCKDGKVDA 436
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+E+ ++ CSP +++N +ID L K G A EL EM KG+ PD TY L+
Sbjct: 437 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLR 496
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+VD+ F M ++P+ YN ++ L + A F MV+K K
Sbjct: 497 GLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKP 556
Query: 262 DDASYKFMMKALSD 275
+A+Y +++ ++D
Sbjct: 557 TEATYTILIEGIAD 570
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 34/254 (13%)
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------- 122
+ +G N S A+N L L NG+ +E LK +RM + + P +A
Sbjct: 93 SSPIGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFC 152
Query: 123 ----------------------NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
++ ++NV+ GYC G A+EV +M +PD +
Sbjct: 153 RSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVV 209
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N ++ LC +G L EA E+ + PD TY +L++A + V +M
Sbjct: 210 TYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEM 269
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
G +P++ YN L+ + + G LDEA F + M K + ++ +++++ G+
Sbjct: 270 RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRW 329
Query: 280 DEILEIVGGILDDG 293
+ ++ +L G
Sbjct: 330 MDAERLLSDMLRKG 343
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V + + Y+ L+ GF ++ D E + + G D V Y +L+ G +
Sbjct: 378 GCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR--GCYPDIVTYNTLLTALCKDGKVD 435
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+E N+ + S + + N+V+D L GK + A++L + M+ K L ++
Sbjct: 436 AAVEILNQLSSKGCSPVL--ITYNTVIDGLTKVGKTEYAVELLEEMRR-----KGLKPDI 488
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + G +G+ +AI++F M P +++N ++ LCK + A +
Sbjct: 489 ITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAY 548
Query: 185 MSDKGVNPDEYTYGLLMD 202
M +KG P E TY +L++
Sbjct: 549 MVEKGCKPTEATYTILIE 566
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 9/167 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ +DG D + +L K G + Y +++ G
Sbjct: 409 MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSK--GCSPVLITYNTVIDGLTKV 466
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A+E E +K + +++L L GK DEA+K+F M+ P +
Sbjct: 467 GKTEYAVELLEEM--RRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAV 524
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
++N + G C + AI+ M E C P ++ LI+
Sbjct: 525 -----TYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIE 566
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 150/319 (47%), Gaps = 13/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D VVY+ L+ GF + GD +RLFEE+ EK G + Y SL+ G+ K
Sbjct: 148 MVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK--GCIPTVFTYNSLLSGFSRK 205
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + + + + + N++LD C G EA +LF M++ PP
Sbjct: 206 GEFGRVQSLFKDMLRQGCVPNIFTF--NNLLDGFCKMGDMVEAHRLFLEMRSLGCPP--- 260
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+N + G C +G+ +A + R+M PD +S+N LID K+G L A +
Sbjct: 261 --DVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ E+ G+ PD ++Y ++D +V F+ M+ +G P+ AV LV L
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG---GIE 296
+ L E+ F MVK + Y +M L + D++ EI + + G +E
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVE 438
Query: 297 FSEELQEFVKGELSKEGRE 315
S+ + E ++ KE E
Sbjct: 439 ISKVILETLRRSDDKEAAE 457
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 126/275 (45%), Gaps = 12/275 (4%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
P V+SY L+ G R D L E+ + GG + V YGSL+ G G +E
Sbjct: 83 CSPNVFSYSILIAGLCRGQKVDEAAELLNEMID--GGHQPNVVTYGSLLSGLCKMGKLKE 140
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A++ ++ V V N ++D G EA +LF+ M + P +
Sbjct: 141 AVDLFSRMVYRGCPP--DGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP-----TVF 193
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + G+ +G F +F+ M C P+ +FNNL+D CK G + EA L+ EM
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
G PD +Y LM + + R+M+ SG+ P++ YN L+ + G L
Sbjct: 254 RSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313
Query: 246 DEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKL 279
D A K F++I L+ D SY ++ L GK+
Sbjct: 314 DHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 140/321 (43%), Gaps = 11/321 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y L+ G + G LF + + G DGVVY L+ G+ KG
Sbjct: 117 GHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYR--GCPPDGVVYNVLIDGFSKKGDMG 174
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + E + E + + NS+L G+F LF M + P N+
Sbjct: 175 EAYRLFEEML-EKGCIP-TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP-----NI 227
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN + DG+C G +A +F +M C PD +S+N L+ +C G EA+ L E
Sbjct: 228 FTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLRE 287
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M GV PD +Y +L+D + +D F ++ SGL P+ Y+ ++ L + G
Sbjct: 288 MIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK 347
Query: 245 LDEAKSFFDIMVKKLKMDDASYKF-MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+ A F M+ DA+ ++ L G +L E E+ ++ + E
Sbjct: 348 VGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYN- 406
Query: 304 FVKGELSKEGREEEVVKLMEK 324
+ +L K R ++V ++ +
Sbjct: 407 LLMYKLCKAKRSDDVCEIFHE 427
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 10/242 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
+ + G ++ N +L+ L +G+ D ++ M P N ++
Sbjct: 3 FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVP-----NTYTYGY 57
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ C RF++A VFR M CSP+ S++ LI LC+ + EA EL EM D G
Sbjct: 58 LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
P+ TYG L+ ++ ++ + F +MV G P+ VYN L+ + G + EA
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177
Query: 250 SFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIE----FSEELQEF 304
F+ M++K + +Y ++ S G+ + + +L G + F+ L F
Sbjct: 178 RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237
Query: 305 VK 306
K
Sbjct: 238 CK 239
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 2/204 (0%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
S+N + + GR + M C P+T ++ L+ LC+ EA ++ M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ +G +P+ ++Y +L+ +VD+ A +M+D G +PN+ Y L+ L ++G L
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
EA F MV + D Y ++ S G + E + +L+ G I
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 305 VKGELSKEGREEEVVKLMEKKERE 328
+ G S++G V L + R+
Sbjct: 199 LSG-FSRKGEFGRVQSLFKDMLRQ 221
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 10/171 (5%)
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
TLS+N L++ L K+G Y +M G P+ YTYG L+ + + R ++ + FR
Sbjct: 17 TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGG 277
M G PN+ Y+ L+ L + +DEA + M+ + +Y ++ L G
Sbjct: 77 GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136
Query: 278 KLDEILEIVGGILDDG----GIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
KL E +++ ++ G G+ ++ + F SK+G E +L E+
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGF-----SKKGDMGEAYRLFEE 182
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
N +Y L++ + R D + M+ +G PN Y L+ L Q +EA+S
Sbjct: 14 NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARS 73
Query: 251 FFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
F M + + SY ++ L G K+DE E++ ++D G + G L
Sbjct: 74 VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSG-L 132
Query: 310 SKEGREEEVVKLMEK 324
K G+ +E V L +
Sbjct: 133 CKMGKLKEAVDLFSR 147
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 149/309 (48%), Gaps = 16/309 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ G R GD+ L +++E+ V +D Y +++ G +
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER--NVKADVFTYSTIIDSLCRDGCID 245
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF-DEALKLFDRMKNEHNPPKRLAVN 123
A+ + E E +K S V NS++ LC GK+ D AL L D + E P N
Sbjct: 246 AAISLFKEM--ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP------N 297
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FNV+ D + +G+ ++A E++++M SP+ +++N L+D C L+EA +
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +PD T+ L+ V RVDDG FR + GL N Y+ LV Q G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGI----LDDGGIEFS 298
+ A+ F MV + D +Y ++ L D GKL++ LEI + +D G + ++
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 299 EELQEFVKG 307
++ KG
Sbjct: 478 TIIEGMCKG 486
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 157/324 (48%), Gaps = 28/324 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + V + + ++ L+ FV++G L++E+ + G+ + + Y +LM GY M+
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR--GISPNIITYNTLMDGYCMQ 346
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR- 119
EA + V S + V S++ C + D+ +K+F N KR
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDI--VTFTSLIKGYCMVKRVDDGMKVF------RNISKRG 398
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L N +++++ G+C G+ K A E+F++M + PD +++ L+D LC NG L +A
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
E++ ++ ++ Y +++ + +V+D F + G++PN+ Y ++ L
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518
Query: 240 VQVGMLDEAKSFFDIMVKKLKMD-----DASYKFMMKA-LSDG-----GKLDEILEIVGG 288
+ G L EA +I+++K++ D D +Y +++A L DG KL E ++ G
Sbjct: 519 CKKGSLSEA----NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 289 ILDDGGIEFSEELQEFVKGELSKE 312
D I+ ++ + GEL K
Sbjct: 575 SADASSIKMVIDM--LLSGELDKS 596
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+++ L GK EA+ L DRM P ++ ++N + +G C G A+++
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENGCQP-----DVVTYNSIVNGICRSGDTSLALDLL 216
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
RKM E D +++ +ID LC++G + A L+ EM KG+ TY L+ +
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+ +DGA + MV + PN+ +N L+ V+ G L EA + M+ + + + +Y
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
Query: 267 KFMMKALSDGGKLDE 281
+M +L E
Sbjct: 337 NTLMDGYCMQNRLSE 351
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 84/157 (53%), Gaps = 1/157 (0%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+FN + G +G+ +A+ + +M E C PD +++N++++ +C++G + A +L +M
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
++ V D +TY ++D+ +D + F++M G++ ++ YN LV L + G
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 246 DEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
++ D++ +++ + ++ ++ GKL E
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 10/203 (4%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+A N+ + N+M + +C + A V K+ + PDT +FN LI L G ++EA
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L M + G PD TY +++ RKM + ++ ++ Y+ ++ L
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE----ILEIVGGILDDGG 294
+ G +D A S F M K +K +Y +++ L GK ++ + ++V +
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 295 IEFSEELQEFVKGELSKEGREEE 317
I F+ L FV KEG+ +E
Sbjct: 299 ITFNVLLDVFV-----KEGKLQE 316
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 154/317 (48%), Gaps = 10/317 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D VVY+ L+ GF + G+ ++LF+E++++ +V D + Y +++ G
Sbjct: 71 MINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQ--RIVPDFIAYTAVICGLCRC 128
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + +N+ + V+ V +++D C +G+ ++A L ++M P
Sbjct: 129 GKMMEADKVFNKMF--SRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP--- 183
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ +ADG C G+ A E+ +M + ++N+L++ LCK+G + +A +
Sbjct: 184 --NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVK 241
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM G+ PD T+ LMDA + + R+M+D GL+P + +N L+
Sbjct: 242 LMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFC 301
Query: 241 QVGMLDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
GML++ + M++K M + +Y +MK + EI G+ G + S
Sbjct: 302 MSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSN 361
Query: 300 ELQEFVKGELSKEGREE 316
+KG +E
Sbjct: 362 TYNILIKGHCKARNMKE 378
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 140/280 (50%), Gaps = 15/280 (5%)
Query: 39 KLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNG 98
K G D V Y +++ GY + G ++ ++ E + +K + NS++ LC +G
Sbjct: 2 KFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEM--QMKGLKPNLYTYNSIILLLCKSG 59
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
K D+A ++ M N+ P + + + DG+C G + A ++F +M + R PD
Sbjct: 60 KVDDAERVLREMINQGIVPDTVV-----YTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPD 114
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
+++ +I LC+ G + EA++++ +M +GV PDE TY L+D + ++ +
Sbjct: 115 FIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHN 174
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGG 277
+MV SGL PN+ Y L L ++G +D A M K L+++ +Y ++ L G
Sbjct: 175 QMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSG 234
Query: 278 KLDEILEI-----VGGILDDGGIEFSEELQEFVK-GELSK 311
+ + +++ V G+ D I F+ + + K GE+ K
Sbjct: 235 NIRQAVKLMEEMEVAGMYPD-TITFTTLMDAYCKTGEMVK 273
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 138/317 (43%), Gaps = 35/317 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF +G D V Y+ L+ G+ + G+ + F L ++ + G+ + V Y +L G
Sbjct: 141 MFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQ--SGLTPNVVTYTALADGLCKL 198
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
G + A E +E G+ ++++ NS+++ LC +G +A+KL + M+ P
Sbjct: 199 GQVDTANELLHEMCGK--GLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTI 256
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ L + +FNV+ +G+C G +D + M
Sbjct: 257 TFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWM 316
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E P+T ++N+L+ Q C + E+Y M +GV PD TY +L+ + +
Sbjct: 317 LEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNM 376
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM 270
+ ++M + G + YN ++ + + EA+ F+ M ++ DA +
Sbjct: 377 KEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLF 436
Query: 271 KALSDG-GKLDEILEIV 286
+S G G ++ LE+
Sbjct: 437 VDISYGEGNMETALELC 453
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 167/356 (46%), Gaps = 30/356 (8%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G++ D V Y+ L+ G + LF + +KLG + + YG+LMKG G
Sbjct: 160 RGYIPDIVTYTTLIKGLCMEHRISKAALLFTRM-QKLG-CTPNAITYGTLMKGLCRTGNI 217
Query: 64 EEAMECYNEAVGENS----SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP-- 117
A++ + E + ++S + K ++ + ++DALC + + DEA LF+ MK + P
Sbjct: 218 SIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTV 277
Query: 118 -----------KRL---AVNLG------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
KRL VN G +FNV+ D C +G+ +A ++ M + P
Sbjct: 278 ISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP 337
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
+ L++N+LI+ C G L A EL+ M KG PD Y +L++ + ++V++ +
Sbjct: 338 NLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLY 397
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDG 276
M+ G RP++ Y L+ L Q G + +AK F +M V + D Y + L
Sbjct: 398 NGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKN 457
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
G L E +E+ L I+ E + L K G+ E +L EK +E+ +
Sbjct: 458 GCLFEAMELFNK-LKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQP 512
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 119/260 (45%), Gaps = 13/260 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V + + Y+ L+ GF GD + LF + K G D + Y L+ GY
Sbjct: 330 MIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK--GCEPDVICYTVLINGYCKT 387
Query: 61 GMEEEAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
EEAM+ YN VG+ VK ++L L GK +A KLF MK + P
Sbjct: 388 SKVEEAMKLYNGMLQVGKRPDVKTYG----ALLTGLFQGGKVGDAKKLFGVMK-VYGIPG 442
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L + + + +G C G +A+E+F K+ Y D FN LID LCK G L A
Sbjct: 443 DLYI----YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETA 498
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EL+ ++ + + PD TY +++ +V F+KM +G P+ Y L+
Sbjct: 499 WELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRG 558
Query: 239 LVQVGMLDEAKSFFDIMVKK 258
+ L++ +MV++
Sbjct: 559 FFESKKLEKVVELLHMMVQR 578
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 9/186 (4%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D Y L+ G + G +LF +K + G+ D +YG + G G EAM
Sbjct: 407 PDVKTYGALLTGLFQGGKVGDAKKLFGVMK--VYGIPGDLYIYGIFLNGLCKNGCLFEAM 464
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E +N+ N +K+ N ++D LC GK + A +LF+++ P + L ++ ++
Sbjct: 465 ELFNKLKSYN--IKLDIECFNCLIDGLCKAGKLETAWELFEKL-----PQEELQPDVVTY 517
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N+M +C G+ A +F+KM + C+PD +++ LI ++ L + EL M
Sbjct: 518 NIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 577
Query: 188 KGVNPD 193
+ V+ D
Sbjct: 578 RDVSLD 583
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 8/212 (3%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
A + F M +P SF +L+ L K ++ LY +M G++PD T +L+
Sbjct: 79 QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
+ VNRV +G ++ G P++ Y L+ L + +A F M K
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198
Query: 262 DDA-SYKFMMKALSDGGKLDEILEIVGGILDDG---GIEFSEELQEF--VKGELSKEGRE 315
+A +Y +MK L G + L++ +L+D GI F + + + L K+ RE
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 316 EEVVKLME--KKEREKAEAKAREAEAAEAAKR 345
+E L E K + + + E AKR
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLMWEEAKR 290
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 24/201 (11%)
Query: 95 CNNGKFD--EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
C G +A + F M + P L SF + G + ++ +M
Sbjct: 70 CKTGNITAIQAFQFFHLMMYSNPTPP-----LSSFTHLLSGLAKIKHYSQVFYLYNQMRL 124
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVD 211
SPD + N L++ LC + E + + +G PD TY L+ C E +R+
Sbjct: 125 SGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCME-HRIS 183
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG-----------MLDEAKSFFDIMVKKLK 260
A F +M G PN Y L+ L + G ML+++ S + I K +
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDS-SLYGINFKPVV 242
Query: 261 MDDASYKFMMKALSDGGKLDE 281
+ SY ++ AL + DE
Sbjct: 243 I---SYSIIIDALCKDRREDE 260
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 145/284 (51%), Gaps = 14/284 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKL--GGVVSDGVVYGSLMKGYFMKGM 62
G A+ + Y ++ + G++ LF +++E+ VV +V SL K G
Sbjct: 204 GCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCK----DGN 259
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
++A+ +NE E +K VA +S++ LCN+G++D+ K+ M + P
Sbjct: 260 LDDALSLFNEM--EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIP----- 312
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ +F+ + D + +G+ +A E++ +M +PDT+++++LID CK L EA ++
Sbjct: 313 NVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQML 372
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M KG P+ TY +L+++ + RVD+G F ++ GL + YN LV Q
Sbjct: 373 DLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQS 432
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
G L+ AK F MV + + +Y ++ L D G+L + LEI
Sbjct: 433 GKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEI 476
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 138/282 (48%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG AD V YS ++ G DG D ++ E+ + ++ + V + +L+ + +
Sbjct: 270 MEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR--NIIPNVVTFSALIDVFVKE 327
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA E YNE V + + +S++D C + EA ++ D M ++ P
Sbjct: 328 GKLLEAKELYNEMVAR--GIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEP--- 382
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +++++ + YC R + + +F ++ DT+++N L+ C++G L A+E
Sbjct: 383 --NIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKE 440
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM +GV P TYG+L+D + + F KM S + + +YN ++ +
Sbjct: 441 LFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMC 500
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+D+A S F + VK +K D +Y M+ L G L E
Sbjct: 501 NASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSE 542
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 115/241 (47%), Gaps = 8/241 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G + + + +L+ G+ ++G EA+ + V + + V N++++ LC G+
Sbjct: 134 GFEPNTITFSTLINGFCLEGRVSEAVALVDRMV--EMKYRPNVVTVNTLINGLCLKGRVT 191
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EAL L DRM + ++ + + C G A+++FRKM E +
Sbjct: 192 EALVLIDRMVKYGCEANEI-----TYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQ 246
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
++ +ID LCK+G L +A L+ EM KG+ D Y ++ R DDGA R+M+
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMI 306
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
+ PN+ ++ L+ V+ G L EAK ++ MV + + D +Y ++ +L
Sbjct: 307 GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLG 366
Query: 281 E 281
E
Sbjct: 367 E 367
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 23/245 (9%)
Query: 88 NSVLDALCNNGKFDEALKLFDR-MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N +++ C K A + R +K P N +F+ + +G+C +GR +A+ +
Sbjct: 108 NIMINCFCRKRKLLFAFSVVGRALKFGFEP------NTITFSTLINGFCLEGRVSEAVAL 161
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
+M E + P+ ++ N LI+ LC G + EA L M G +E TYG +++ +
Sbjct: 162 VDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCK 221
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDAS 265
FRKM + ++ ++ Y+ ++ L + G LD+A S F+ M +K +K D +
Sbjct: 222 SGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVA 281
Query: 266 YKFMMKALSDGGKLDE----ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
Y ++ L + G+ D+ + E++G + + FS + FV KEG KL
Sbjct: 282 YSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFV-----KEG------KL 330
Query: 322 MEKKE 326
+E KE
Sbjct: 331 LEAKE 335
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG VAD V Y+ L+ GF + G + LF+E+ + GV V YG L+ G G
Sbjct: 413 KGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSR--GVPPSVVTYGILLDGLCDNGEL 470
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+E + + + S + + N ++ +CN K D+A LF + + P L
Sbjct: 471 QKALEIFEKM--QKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVL--- 525
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++NVM G C +G +A +FRKM E C+P ++N LI + + EL
Sbjct: 526 --TYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIE 583
Query: 184 EMSDKGVNPDEYTYGLLM 201
EM +G D T +++
Sbjct: 584 EMKMRGFAADASTIKMVV 601
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 149/330 (45%), Gaps = 22/330 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G + S ++LF+E+ + G+ D V Y +L++G G
Sbjct: 99 GCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASR--GLALDTVCYTALIRGLLQAGKIP 156
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A Y + + V ++++D LC G+ A+++F M+ + LA N
Sbjct: 157 QASSVYKTMTSQGCVPDV--VTLSTMIDGLCKAGRIGAAVRIFKSME-----ARGLAPNE 209
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G C + A+E+ +M + C+PDT+++N LID LCK+G +A A + E
Sbjct: 210 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDE 269
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + G PD YTY +L+ + D F M S PN+ Y L+ L +
Sbjct: 270 MLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQ 329
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI-----LDDGGIEFS 298
L +A ++ M ++ D Y ++ L GKL+ GG ++ G+ S
Sbjct: 330 LTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLE------GGCMLFDEMERSGVANS 383
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKERE 328
+ + L K R +E V L +E
Sbjct: 384 QTRTRLI-FHLCKANRVDEAVSLFNAIRKE 412
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 132/283 (46%), Gaps = 14/283 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D V S ++ G + G R+F+ ++ + G+ + VVY +L+ G
Sbjct: 165 MTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR--GLAPNEVVYSALIHGL--- 219
Query: 61 GMEEEAMECYNEAVGE--NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ M+C E + + + + N ++D LC +G A FD M P
Sbjct: 220 -CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKP- 277
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ ++N++ G+C G A VF M RCSP+ +++ LI LCK L +A
Sbjct: 278 ----DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKA 333
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
Y M ++G PD + Y L+D + +++ G F +M SG+ N RL+
Sbjct: 334 SLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFH 392
Query: 239 LVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
L + +DEA S F+ + K+ +Y ++ AL GK++E
Sbjct: 393 LCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNE 435
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 9/293 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ G ++ G +++ + + G V D V +++ G
Sbjct: 130 MASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQ--GCVPDVVTLSTMIDGLCKA 187
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A+ + E + + V ++++ LC K D AL++ +MK P +
Sbjct: 188 GRIGAAVRIFKSM--EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 245
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N++ DG C G A F +M E C PD ++N LI CK G A
Sbjct: 246 -----TYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +MS +P+ TYG L+ + ++ + Y++ M + G P+ VY+ LV L
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G L+ FD M + + + ++ L ++DE + + I +G
Sbjct: 361 KSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 413
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 8/239 (3%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
+ L+ G GM +A E ++ + +++D L N K EA+ L +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTY--TTIVDWLAKNKKIQEAVALME 58
Query: 109 RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
++ P + ++N + +G C GR ++AI++ RK+ + C+PD +++ +LID
Sbjct: 59 KITANGCTP-----TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 113
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
L K EA +L+ EM+ +G+ D Y L+ + ++ ++ ++ M G P+
Sbjct: 114 LGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPD 173
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+ + ++ L + G + A F M + L ++ Y ++ L K+D LE++
Sbjct: 174 VVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 232
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 2/202 (0%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+F+++ +G G A + ++ C+ D ++ ++D L KN + EA L ++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ G P TY L++ ++ R+++ RK+VD+G P++ Y L+ L +
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
EA F M + L +D Y +++ L GK+ + + + G + L
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 305 VKGELSKEGREEEVVKLMEKKE 326
+ G L K GR V++ + E
Sbjct: 181 IDG-LCKAGRIGAAVRIFKSME 201
>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 376
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 140/284 (49%), Gaps = 10/284 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ +M G +G+ D ++E +K+ G V D + YG ++ G+ G +++
Sbjct: 60 VSFNIMMRGLFDNGEVDKAISIWELMKKS--GFVEDSITYGIIIDGFCKNGYINKSLHVL 117
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
A G+ + A A +++++ LC K D+A+ + + M P N +N +
Sbjct: 118 EIAEGKGGV--LDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKP-----NAHVYNTL 170
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ G +F DAI VFR+MG CSP ++++ LI+ LCK +EA +L EM +KG
Sbjct: 171 INGFVGASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGW 230
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-K 249
P TY LLM + ++V+ + +++ G +P++ ++N L+ L VG A
Sbjct: 231 KPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALM 290
Query: 250 SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+FD+ + ++ +M+ G + L I IL G
Sbjct: 291 LYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSG 334
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 45/291 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y ++ GF ++G + + E + E GGV+ D Y +++ G + +
Sbjct: 89 GFVEDSITYGIIIDGFCKNGYINKSLHVLE-IAEGKGGVL-DAFAYSAMINGLCKEAKLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ N + S K +A N++++ KFD+A+++F M + P +
Sbjct: 147 KAVSVLNGMI--KSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSP-----TI 199
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKM---GEYRC-------------------------- 155
+++ + +G C RF +A ++ ++M G C
Sbjct: 200 VTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQ 259
Query: 156 ------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
PD N LI LC G A LY +M+ P+ T+ LM+ ++
Sbjct: 260 VLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGD 319
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKL 259
+ + + +++ SGL+P++ YN + L + A F D + KK+
Sbjct: 320 IRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLHDALTKKI 370
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 11/236 (4%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S V AV N++L G+ + L++ M ++ + N+ SFN+M G
Sbjct: 19 SKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMG------RKGSQNVVSFNIMMRGLFDN 72
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G AI ++ M + D++++ +ID CKNG + ++ + KG D + Y
Sbjct: 73 GEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAY 132
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMV 256
+++ + ++D + M+ SG +PN VYN L+ V D+A + F ++
Sbjct: 133 SAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGS 192
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG----IEFSEELQEFVKGE 308
+Y ++ L G + E ++V +L+ G I +S ++ +G
Sbjct: 193 MDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGH 248
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 95/218 (43%), Gaps = 9/218 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY+ L+ GFV D R+F E+ V Y +L+ G EA +
Sbjct: 166 VYNTLINGFVGASKFDDAIRVFREMGSM--DCSPTIVTYHTLINGLCKGERFSEAYDLVK 223
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E + K + + ++ LC K + AL+L++++ ++ P ++ N++
Sbjct: 224 EML--EKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKP-----DVQMHNILI 276
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G C G+ + A+ ++ M + C+P+ ++ N L++ K+G + A ++ + G+
Sbjct: 277 HGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQ 336
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
PD +Y + + NR+ + + + P +
Sbjct: 337 PDIISYNITLKGLCSCNRISFAILFLHDALTKKIFPTI 374
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + A+ +Y EM++ V+PD Y ++ V R+ D + M G N+
Sbjct: 1 CESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKG-SQNV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIV-- 286
+N ++ L G +D+A S +++M K ++D+ +Y ++ G +++ L ++
Sbjct: 60 VSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEI 119
Query: 287 ----GGILD 291
GG+LD
Sbjct: 120 AEGKGGVLD 128
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D + +M +S + P+ VYN ++ ++VG + + +++M +K + S+ M
Sbjct: 6 IDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKGSQNVVSFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
M+ L D G++D+ + I + G +E S + G K G + + ++E E
Sbjct: 66 MRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDG-FCKNGYINKSLHVLEIAE 121
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 160/337 (47%), Gaps = 23/337 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K D Y+ L+ GF + LF ++K++ + + + L+ G+ +
Sbjct: 227 MVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKE--NINPNVYTFNILVDGFCKE 284
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A A+ +K V NS++D C+ K ++A +FD M + +
Sbjct: 285 GKVNDAKVVL--AIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMAS-----GGV 337
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ + M +G+C +AI +F +M + P+ +++++LID LCK G + A +
Sbjct: 338 IANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALK 397
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM D+G P+ TY ++DA + + VD + D G+RP++ Y L+ L
Sbjct: 398 LVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLC 457
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
Q G L++A++ F D++VK +D +Y M++ D G D+ L ++ + D+G I
Sbjct: 458 QSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIP--- 514
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKARE 336
+ + E ++ L EK E + AE RE
Sbjct: 515 ----------NAKTYELVILSLFEKDENDTAEKLLRE 541
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 138/291 (47%), Gaps = 10/291 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG+ + ++ L+ G G +++ + G D V YG+L+ G G
Sbjct: 125 KGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQ--GFHLDQVSYGTLINGLCKVGRI 182
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A++ G+ V+ +AV N ++D +C ++A L+ +M KR+ +
Sbjct: 183 TAALQLLKRVDGK--LVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV-----AKRICPD 235
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + G+ + AI++F KM + +P+ +FN L+D CK G + +A+ +
Sbjct: 236 VFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLA 295
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + PD TY LMD +N+V+ F M G+ N+ +Y +V ++
Sbjct: 296 IMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIK 355
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
M+DEA + F+ M +K+ + +Y ++ L G++ L++V + D G
Sbjct: 356 MVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G +A+ +Y+ ++ GF + D LFEE++ + ++ + V Y SL+ G G
Sbjct: 336 GVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCR--KIIPNVVTYSSLIDGLCKLGRIF 393
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ +E + + V +S+LDALC N D+A+ L +K++ P ++
Sbjct: 394 YALKLVDEM--HDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRP-----DM 446
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ ++ G C GR +DA VF + + D ++ +I C G +A L +
Sbjct: 447 YTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSK 506
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
M D G P+ TY L++ + FE + D R+M+ GL
Sbjct: 507 MEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 95/199 (47%), Gaps = 6/199 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +L +L AL L +M+ + + +FN++ + + G + +F
Sbjct: 65 NKILSSLVKAKHHSTALSLHQQME-----LNGIESDFFTFNILINCFSQLGLNSLSFSIF 119
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
K+ + P ++FN LI LC G + +A + ++ +G + D+ +YG L++ +V
Sbjct: 120 AKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKV 179
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASY 266
R+ +++ ++PN +YN ++ + + ++++A + MV K++ D +Y
Sbjct: 180 GRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTY 239
Query: 267 KFMMKALSDGGKLDEILEI 285
++ S KL+ +++
Sbjct: 240 NALISGFSAVSKLNYAIDL 258
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+P T FN ++ L K + A L+ +M G+ D +T+ +L++ ++ +
Sbjct: 58 TPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFS 117
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALS 274
F K++ G P +N L+ L G + +A F D ++ + +D SY ++ L
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177
Query: 275 DGGKLDEILEIV----GGILDDGGIEFSEELQEFVKGELSKEG 313
G++ L+++ G ++ + ++ + K +L +
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDA 220
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 144/289 (49%), Gaps = 13/289 (4%)
Query: 9 DPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP V++Y L+ GF G V RL ++ ++ V + Y L+ KGM +A
Sbjct: 250 DPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDR--NVNLNVYTYNILIDALCKKGMLGKA 307
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ N + + V N+++ C EA KLFD P ++ S
Sbjct: 308 HDMRNLMIERGQ--RPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITP-----DVWS 360
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N++ GYC R +A+ +F KM + +P+ +++++LID LCK+G ++ A EL+ +
Sbjct: 361 YNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIH 420
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
D G +P+ TY +++DA ++ VD F M + GL PN++ YN L+ + +D
Sbjct: 421 DGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRID 480
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
EA + F+ M ++ L D +Y ++ L G++ E+ ++ DGG
Sbjct: 481 EAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELF-NVMHDGG 528
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L++G+ ++ D LF ++ K + + V Y SL+ G G
Sbjct: 353 GITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYK--KLAPNIVTYSSLIDGLCKSGRIS 410
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A E ++ + + + N +LDALC D+A++LF+ M P N+
Sbjct: 411 YAWELFSAI--HDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTP-----NV 463
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S+N++ +GYC R +A+ +F +M PD++++N LID LCK+G ++ A EL+
Sbjct: 464 SSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNV 523
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRV 210
M D G D TY +L DA ++ V
Sbjct: 524 MHDGGPPVDVITYNILFDAFSKIQHV 549
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 9/235 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V ++ LM G+ D +LF+ E G+ D Y L+ GY
Sbjct: 314 MIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAE--CGITPDVWSYNILIIGYCKN 371
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA+ +N+ + + V +S++D LC +G+ A +LF + + P
Sbjct: 372 NRIDEALSLFNKM--NYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSP--- 426
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N+M D C AIE+F M E +P+ S+N LI+ CK+ + EA
Sbjct: 427 --NVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMN 484
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
L+ EM + + PD TY L+D + R+ F M D G ++ YN L
Sbjct: 485 LFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNIL 539
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 125/286 (43%), Gaps = 10/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G V S L+ + G F + + ++ G + + ++MKG +
Sbjct: 104 MGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKR--GYQLNAITLTTIMKGLCIN 161
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A+E ++ V + + V ++++ LC G EA +L +M+ + P
Sbjct: 162 GEVRKALEFHDSVVAQ--GFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRP--- 216
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +N++ DG C G +A +++ + PD ++ LI C G E
Sbjct: 217 --NVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTR 274
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M D+ VN + YTY +L+DA + + M++ G RP+L +N L+
Sbjct: 275 LLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYC 334
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+ EA+ FD + + D SY ++ ++DE L +
Sbjct: 335 LYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSL 380
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 94/227 (41%), Gaps = 41/227 (18%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
D+A+ LF R+ H P + FN++ + AI + ++MG +P +
Sbjct: 60 DDAVALFTRLITMHPLPSVV-----EFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIV 114
Query: 161 SFNNLIDQ-----------------------------------LCKNGMLAEAEELYGEM 185
+ + LI+ LC NG + +A E + +
Sbjct: 115 TLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSV 174
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+G DE TYG L++ ++ + KM +RPN+ +YN +V L + G++
Sbjct: 175 VAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLV 234
Query: 246 DEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
EA+ + D++ + + D +Y ++ G+ E+ ++ ++D
Sbjct: 235 TEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVD 281
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 164/361 (45%), Gaps = 28/361 (7%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V+Y+ ++ G +D + F L+ E+ K + V Y +L+ G + ++A+
Sbjct: 150 PDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK--RICPSVVTYNTLICGLCIMAQLKDAI 207
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
++ + E+ + + + ++DA C GK EA +F M E P N+ ++
Sbjct: 208 GLLHKMILED--INPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKP-----NIVTY 260
Query: 128 NVMADGYCGQGRFK--------------DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
N + DG+ K +A+ +F +M + PD + +N+LID LCK+G
Sbjct: 261 NSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSG 320
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
A + GEM +G PD +TY L+DA + VD K+ D G++P++ YN
Sbjct: 321 RTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYN 380
Query: 234 RLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
L+ L + G L +A+ F D++VK D +Y M+K G DE L +V + D
Sbjct: 381 ILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSK-MKD 439
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIA 352
G + E + L +G ++ K E R K REA A+ KR +
Sbjct: 440 SGCSPDAKNCEIIIRSLFDKGENDKAGKFREMIVRGKCH---REAPASTIRKRHPLVTVI 496
Query: 353 S 353
+
Sbjct: 497 A 497
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
A+ +++ LC G+ +AL D++ + +N S+ + +G C G+ + A
Sbjct: 82 AITFTTLIKGLCLKGEIHKALHFHDKVVAQ-----GFKLNQVSYGTLINGLCKVGQTRAA 136
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+E R++ PD + +N +ID LCK+ ++ +A LY EM K + P TY L+
Sbjct: 137 LEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICG 196
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
+ ++ D KM+ + P + ++ L+ + G + EAK+ F +M+K+ +K +
Sbjct: 197 LCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPN 256
Query: 263 DASYKFMMKALSDGGKLDEILE 284
+Y +M DG L +++
Sbjct: 257 IVTYNSLM----DGHHLVNVVK 274
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 145/280 (51%), Gaps = 14/280 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ GF G + E++E+ GG+ + YG+++ G+ G +EA++ +
Sbjct: 186 VTYNTVIAGFCSRGRVQAALDIMREMRER-GGIAPNQYTYGTVISGWCKVGRVDEAVKVF 244
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+E + + VK AV N+++ C+ GK D AL DRM + +A+ + ++N++
Sbjct: 245 DEMLTKG-EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE-----RGVAMTVATYNLL 298
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
GR +A E+ +MG + D ++N LI+ CK G + +A E++ MS +GV
Sbjct: 299 VHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 358
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
TY L+ A + +V + F + V G+RP+L +YN L+ G +D A
Sbjct: 359 RATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA-- 416
Query: 251 FFDIM----VKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
F+IM K++ DD +Y +M+ L G++DE +++
Sbjct: 417 -FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 455
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 16/278 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G Y+ L+ DG + L EE+ K G+ D Y L+ G+ +
Sbjct: 283 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK--GLALDVFTYNILINGHCKE 340
Query: 61 GMEEEAMECYNEAVGENSS---VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G ++A+E + EN S V+ + V S++ AL G+ E KLFD P
Sbjct: 341 GNVKKALEIF-----ENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 395
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+L +N + + + G A E+ +M + R +PD +++N L+ LC G + E
Sbjct: 396 -----DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A +L EM+ +G+ PD TY L+ V D +M++ G P L YN L+
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 510
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
L + G D+A++ MV+ + DD++Y +++ L+
Sbjct: 511 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 548
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 10/246 (4%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
+ V Y +++ G+ +G + A++ E + E + + +V+ C G+ DEA+
Sbjct: 183 PNAVTYNTVIAGFCSRGRVQAALDIMRE-MRERGGIAPNQYTYGTVISGWCKVGRVDEAV 241
Query: 105 KLFDRM--KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
K+FD M K E P + +N + GYC QG+ A+ +M E + ++
Sbjct: 242 KVFDEMLTKGEVKPEAVM------YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 295
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
N L+ L +G EA EL EM KG+ D +TY +L++ + V F M
Sbjct: 296 NLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSR 355
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
G+R + Y L+ L + G + E FD V++ ++ D Y ++ + S G +D
Sbjct: 356 RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 415
Query: 282 ILEIVG 287
EI+G
Sbjct: 416 AFEIMG 421
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 7/171 (4%)
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
RL + +FN+M C G+ A+E+ R+M P+ +++N +I C G + A
Sbjct: 149 RLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAA 204
Query: 179 EELYGEMSDK-GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG-LRPNLAVYNRLV 236
++ EM ++ G+ P++YTYG ++ +V RVD+ F +M+ G ++P +YN L+
Sbjct: 205 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 264
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
G G LD A + D MV++ + M A+Y ++ AL G+ E E+V
Sbjct: 265 GGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 315
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 13/252 (5%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ + N +L LC+ GK AL+L +M P+ AV ++N + G+C +GR
Sbjct: 150 LPLCTTTFNIMLRHLCSAGKPARALELLRQM------PRPNAV---TYNTVIAGFCSRGR 200
Query: 140 FKDAIEVFRKMGEY-RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VNPDEYTY 197
+ A+++ R+M E +P+ ++ +I CK G + EA +++ EM KG V P+ Y
Sbjct: 201 VQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY 260
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-V 256
L+ + ++D Y +MV+ G+ +A YN LV L G EA + M
Sbjct: 261 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 320
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
K L +D +Y ++ G + + LEI + G+ + + LSK+G+ +
Sbjct: 321 KGLALDVFTYNILINGHCKEGNVKKALEIFEN-MSRRGVRATVVTYTSLIYALSKKGQVQ 379
Query: 317 EVVKLMEKKERE 328
E KL ++ R
Sbjct: 380 ETDKLFDEAVRR 391
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 161/375 (42%), Gaps = 52/375 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D +++ L+LG + G F+++ + G + VY L+ G
Sbjct: 141 MIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH--GCQPNVPVYNVLLHGLCSS 198
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A + E ++ S V N++LDA+C + +E KLF+ M+ P
Sbjct: 199 GQLEQANTLFAEM--KSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVP--- 253
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +F+ + G C G + A+EVF M E C P+ ++ LI LC+ + +A E
Sbjct: 254 --NVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARE 311
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD-SGLRPNLAVYNRLVGKL 239
L+ +M+ + PD Y L+ + +D+ +R+M +GL+P + +N L+
Sbjct: 312 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 371
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI------------- 285
++G L A M K L D +Y+ ++ LS KLDE LE+
Sbjct: 372 CKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 431
Query: 286 ------VGGILDDGGIEFS---------------EELQEFVKGELSKEGREEEVVKLMEK 324
VGG+ G I+ + E + L K GR E+ KLME
Sbjct: 432 VSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME- 490
Query: 325 KEREKAEAKAREAEA 339
AKAR+ A
Sbjct: 491 ------PAKARDITA 499
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 136/286 (47%), Gaps = 10/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D ++ +M GF R + + +++ + E G D V Y L+ G
Sbjct: 36 MMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVE--SGYKPDNVSYHILIHGLAKI 93
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +E+++ +E V + M A + S++ AL + D A LFD M + P RL
Sbjct: 94 GKLDESLKILSEMVMRGQTPSMQAYS--SLVRALAKARRVDHASSLFDEMIRGGHHPDRL 151
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
F + G C G+ KDA E F++M ++ C P+ +N L+ LC +G L +A
Sbjct: 152 M-----FYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANT 206
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM +PD TY L+DA + RV++G F M +G PN+ ++ L+ L
Sbjct: 207 LFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLC 266
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+ G L++A F M++ K + +Y ++ L K+ + E+
Sbjct: 267 RTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAREL 312
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 73/140 (52%)
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
K +A N+ +++ + + + +++ +V +M C+PD +FN ++ ++ + +
Sbjct: 4 KNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEK 63
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A E+Y M + G PD +Y +L+ ++ ++D+ +MV G P++ Y+ LV
Sbjct: 64 AREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVR 123
Query: 238 KLVQVGMLDEAKSFFDIMVK 257
L + +D A S FD M++
Sbjct: 124 ALAKARRVDHASSLFDEMIR 143
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
+ +++++I L K E+ ++ EM G NPD + + +M N ++ +
Sbjct: 9 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDG 276
+ MV+SG +P+ Y+ L+ L ++G LDE+ MV + + +Y +++AL+
Sbjct: 69 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128
Query: 277 GKLDE 281
++D
Sbjct: 129 RRVDH 133
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 147/310 (47%), Gaps = 13/310 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D VVY+ L+ GF + GD +RLFEE+ EK G + Y SL+ G+ K
Sbjct: 148 MVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK--GCIPTVFTYNSLLSGFSRK 205
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + + + + + N++LD C G EA +LF M++ PP
Sbjct: 206 GEFGRVQSLFKDMLRQGCVPNIFTF--NNLLDGFCKMGDMVEAHRLFLEMRSLGCPP--- 260
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+N + G C +G+ +A + R+M PD +S+N LID K+G L A +
Sbjct: 261 --DVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ E+ G+ PD ++Y ++D +V F+ M+ +G P+ AV LV L
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG---GIE 296
+ L E+ F MVK + Y +M L + D++ EI + + G +E
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVE 438
Query: 297 FSEELQEFVK 306
S+ + E ++
Sbjct: 439 ISKVILETLR 448
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 126/275 (45%), Gaps = 12/275 (4%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
P V+SY L+ G R D L E+ + GG + V YGSL+ G G +E
Sbjct: 83 CSPNVFSYSILIAGLCRGQKVDEAAELLNEMID--GGHQPNVVTYGSLLSGLCKMGKLKE 140
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A++ ++ V V N ++D G EA +LF+ M + P +
Sbjct: 141 AVDLFSRMVYRGCPP--DGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP-----TVF 193
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + G+ +G F +F+ M C P+ +FNNL+D CK G + EA L+ EM
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
G PD +Y L+ + + R+M+ SG+ P++ YN L+ + G L
Sbjct: 254 RSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313
Query: 246 DEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKL 279
D A K F++I L+ D SY ++ L GK+
Sbjct: 314 DHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 140/321 (43%), Gaps = 11/321 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y L+ G + G LF + + G DGVVY L+ G+ KG
Sbjct: 117 GHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYR--GCPPDGVVYNVLIDGFSKKGDMG 174
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + E + E + + NS+L G+F LF M + P N+
Sbjct: 175 EAYRLFEEML-EKGCIP-TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP-----NI 227
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN + DG+C G +A +F +M C PD +S+N LI +C G EA+ L E
Sbjct: 228 FTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLRE 287
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M GV PD +Y +L+D + +D F ++ SGL P+ Y+ ++ L + G
Sbjct: 288 MIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK 347
Query: 245 LDEAKSFFDIMVKKLKMDDASYKF-MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+ A F M+ DA+ ++ L G +L E E+ ++ + E
Sbjct: 348 VGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYN- 406
Query: 304 FVKGELSKEGREEEVVKLMEK 324
+ +L K R ++V ++ +
Sbjct: 407 LLMYKLCKAKRSDDVCEIFHE 427
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 10/242 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
+ + G ++ N +L+ L +G+ D ++ M P N ++
Sbjct: 3 FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVP-----NTYTYGY 57
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ C RF++A VFR M CSP+ S++ LI LC+ + EA EL EM D G
Sbjct: 58 LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
P+ TYG L+ ++ ++ + F +MV G P+ VYN L+ + G + EA
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177
Query: 250 SFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIE----FSEELQEF 304
F+ M++K + +Y ++ S G+ + + +L G + F+ L F
Sbjct: 178 RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237
Query: 305 VK 306
K
Sbjct: 238 CK 239
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 2/204 (0%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
S+N + + GR + M C P+T ++ L+ LC+ EA ++ M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ +G +P+ ++Y +L+ +VD+ A +M+D G +PN+ Y L+ L ++G L
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
EA F MV + D Y ++ S G + E + +L+ G I
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 305 VKGELSKEGREEEVVKLMEKKERE 328
+ G S++G V L + R+
Sbjct: 199 LSG-FSRKGEFGRVQSLFKDMLRQ 221
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 10/171 (5%)
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
TLS+N L++ L K+G Y +M G P+ YTYG L+ + + R ++ + FR
Sbjct: 17 TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGG 277
M G PN+ Y+ L+ L + +DEA + M+ + +Y ++ L G
Sbjct: 77 GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136
Query: 278 KLDEILEIVGGILDDG----GIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
KL E +++ ++ G G+ ++ + F SK+G E +L E+
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGF-----SKKGDMGEAYRLFEE 182
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
N +Y L++ + R D + M+ +G PN Y L+ L Q +EA+S
Sbjct: 14 NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARS 73
Query: 251 FFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
F M + + SY ++ L G K+DE E++ ++D G + G L
Sbjct: 74 VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSG-L 132
Query: 310 SKEGREEEVVKLMEK 324
K G+ +E V L +
Sbjct: 133 CKMGKLKEAVDLFSR 147
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 10/290 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + D +Y+ ++ GF GD R F+E++ K G+ +DGV Y +++ G
Sbjct: 352 MVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRK--GLATDGVTYTTMINGLCRA 409
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA + E V V ++D C GK EA ++ + M P
Sbjct: 410 VELEEAEKLLQEMWARRLDV--DEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTP--- 464
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + DG C QG + A E+ +M + ++N+LI+ LCK G L +A
Sbjct: 465 --NVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMR 522
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+M + PD YTY L+DA + +D + ++M+D G++P + YN L+
Sbjct: 523 TMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFC 582
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
G ++ K D M++K + + A+Y +MK + EI G+
Sbjct: 583 MSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGM 632
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ L G + GD L E+ K G+ + Y SL+ G
Sbjct: 457 MVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNK--GLELNACTYNSLINGLCKA 514
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+AM A + + +K +++DALC +G D A L M + K +
Sbjct: 515 GYLEQAMR--TMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLD-----KGI 567
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++NV+ +G+C GR + ++ M E P+ ++N+L+ Q C + E
Sbjct: 568 KPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTE 627
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+Y M + V P+E TY +L+ + + + + +M+ G R Y+ L+ L
Sbjct: 628 IYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLN 687
Query: 241 QVGMLDEAKSFFDIMVKK 258
+ EA+ F M K+
Sbjct: 688 KKKKFVEARELFHDMRKE 705
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 128/291 (43%), Gaps = 28/291 (9%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K F +DP + +L+L S + R + G+ +++ +
Sbjct: 198 KTFSSDPASFDFLLLCL----PSAPLLRRLRQY-----GISPSPEACNAVLSRLPL---- 244
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA+E + E +N + N +L ALC+ G+ +A +LFD M + A +
Sbjct: 245 DEAIELFQELPHKN------VCSYNILLKALCDAGRVKDARQLFDEMAS--------APD 290
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ ++ G+C G ++A+++ +M P+ + +++ LC G +++A +
Sbjct: 291 VVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVE 350
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M + V DE Y ++ + +F +M GL + Y ++ L +
Sbjct: 351 DMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAV 410
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L+EA+ ++ ++L +D+ +Y ++ GK+ E ++ ++ G
Sbjct: 411 ELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRG 461
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY+Y L + GD D L +E+ +K G+ V Y LM G+ M G E
Sbjct: 534 PDVYTYTTLIDALCKSGDLDRAHSLLQEMLDK--GIKPTIVTYNVLMNGFCMSGRVEGGK 591
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + + +N + +A NS++ C +++ M++ P N ++
Sbjct: 592 KLLDWMLEKN--IHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGP-----NENTY 644
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N++ G+C K+A+ +M + S++ LI L K EA EL+ +M
Sbjct: 645 NILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRK 704
Query: 188 KGVNPDEYTYGLLMDACF 205
+G+ + Y +D F
Sbjct: 705 EGLTAESDVYDFYIDLNF 722
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 145/301 (48%), Gaps = 13/301 (4%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+ + + V+YS ++ +DG LF E++EK G+ D Y S++ G+ G
Sbjct: 248 ISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK--GIFPDLFTYNSMIVGFCSSGR 305
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A + E + + V N++++A GKF EA +L+D M P+ +
Sbjct: 306 WSDAEQLLQEML--ERKISPDVVTYNALINAFVKEGKFFEAEELYDEML-----PRGIIP 358
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +++ M DG+C Q R A +F M CSP+ ++FN LID C + + EL
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM++ G+ D TY L+ + V ++ ++M+ SGL P++ + L+ L
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
G L +A F +M K K DAS+ F + + IL + G++++G +EEL
Sbjct: 479 GKLKDALEMFKVMQKSKKDLDASHPF--NGVEPDVQTYNIL--ISGLINEGKFLEAEELY 534
Query: 303 E 303
E
Sbjct: 535 E 535
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 165/357 (46%), Gaps = 11/357 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF + V ++ LM G R+G L + + E G+ + YG+++ G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED--GLQPTQITYGTIVDGMCKI 232
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A++ + + E S + + V ++++D+LC +G+ +A LF M+ + P
Sbjct: 233 GDTVSALDLLRK-MEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP--- 288
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L ++N M G+C GR+ DA ++ ++M E + SPD +++N LI+ K G EAEE
Sbjct: 289 --DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY EM +G+ P+ TY ++D + NR+D F M G PNL +N L+
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+D+ M + L D +Y ++ G L+ L+++ ++ G
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREA-EAAEAAKRSARAAIASLI 355
+ G L G+ ++ +++ + ++ K + A E ++ I+ LI
Sbjct: 467 TCDTLLDG-LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 135/262 (51%), Gaps = 10/262 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + + ++ L+ G+ D L E+ E G+V+D Y +L+ G+++
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET--GLVADTTTYNTLIHGFYLV 443
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEH 114
G A++ E + +S + V +++LD LC+NGK +AL++F M+ +
Sbjct: 444 GDLNAALDLLQEMI--SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
+P + ++ ++N++ G +G+F +A E++ +M PDT++++++ID LCK
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L EA +++ M K +P+ T+ L++ + RVDDG F +M G+ N Y
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 235 LVGKLVQVGMLDEAKSFFDIMV 256
L+ +VG ++ A F M+
Sbjct: 622 LICGFRKVGNINGALDIFQEMI 643
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 135/329 (41%), Gaps = 56/329 (17%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D Y+ +++GF G +L +E+ E+ + D V Y +L+ + +G
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER--KISPDVVTYNALINAFVKEGKF 341
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E Y+E + + + + +S++D C + D A +F M + P N
Sbjct: 342 FEAEELYDEMLPRG--IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-----N 394
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI----------------- 166
L +FN + DGYCG R D +E+ +M E DT ++N LI
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 167 ------------------DQLCKNGMLAEAEELYGEMSDK-----------GVNPDEYTY 197
D LC NG L +A E++ M GV PD TY
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-V 256
+L+ + + + +M G+ P+ Y+ ++ L + LDEA FD M
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 574
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEI 285
K + ++ ++ G++D+ LE+
Sbjct: 575 KSFSPNVVTFTTLINGYCKAGRVDDGLEL 603
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 17/243 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VAD Y+ L+ GF GD + L +E+ G+ D V +L+ G G +
Sbjct: 425 GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS--GLCPDIVTCDTLLDGLCDNGKLK 482
Query: 65 EAMECYN---------EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
+A+E + +A + V+ N ++ L N GKF EA +L++ M
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM----- 537
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P + + + +++ M DG C Q R +A ++F MG SP+ ++F LI+ CK G +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN-LAVYNR 234
+ EL+ EM +G+ + TY L+ +V ++ F++M+ SG+ P+ + + N
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Query: 235 LVG 237
L G
Sbjct: 658 LTG 660
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 7/208 (3%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E ++ + ++ C+ K AL F ++ P ++ +FN + G C
Sbjct: 106 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHP-----DVVTFNTLLHGLC 160
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+ R +A+ +F +M E C P+ ++F L++ LC+ G + EA L M + G+ P +
Sbjct: 161 VEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVD-SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
TYG ++D ++ RKM + S + PN+ +Y+ ++ L + G +A++ F
Sbjct: 221 TYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 255 MVKK-LKMDDASYKFMMKALSDGGKLDE 281
M +K + D +Y M+ G+ +
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSD 308
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 1/185 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
I +++KM + D SF LI C L A +G+++ G++PD T+ L+
Sbjct: 98 VISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLH 157
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+RV + F +M ++ RPN+ + L+ L + G + EA + D M++ L+
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
+Y ++ + G L+++ + + I + + + L K+GR + L
Sbjct: 218 TQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 322 MEKKE 326
+ +
Sbjct: 278 FTEMQ 282
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 51/213 (23%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKL------GGVVSDGVVYG 51
M G D V L+ G +G D+ +F++ ++ K+ L GV D Y
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 52 SLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK 111
L+ G +G EA E Y E + + + +S++D LC + DEA ++FD M
Sbjct: 516 ILISGLINEGKFLEAEELYEEM--PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 112 NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE----------------YR- 154
++ P N+ +F + +GYC GR D +E+F +MG +R
Sbjct: 574 SKSFSP-----NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 155 ------------------CSPDTLSFNNLIDQL 169
PDT++ N++ L
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 152/321 (47%), Gaps = 13/321 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D YS L+ G G+ DG R+++E+ E GV D VVY +++ GY G EE +E
Sbjct: 264 DLYTYSTLIHGLCGSGNLDGATRVYKEMAE--NGVSPDVVVYNTMLNGYLRAGRIEECLE 321
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ V E + + V+ N ++ L N K DEA+ +++ + P K + ++
Sbjct: 322 LWK--VMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELL-----PEKDCCADSMTYG 373
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
V+ G C G A+ + + R DT +++++I+ LC+ G L E + +M+
Sbjct: 374 VLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH 433
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G P+ Y +++ ++++D +F MV G P + YN L+ L + EA
Sbjct: 434 GCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 493
Query: 249 KSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+ M++K K + +Y +M L G KLD L + L+ G + ++ +
Sbjct: 494 YALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKPDVKMHNIIIH 552
Query: 308 ELSKEGREEEVVKLM-EKKER 327
L G+ E+ ++L E K+R
Sbjct: 553 GLCSSGKVEDALQLYSEMKQR 573
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 141/293 (48%), Gaps = 14/293 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M+ +GF D Y L+ ++G +LF+E+ E+ GV D Y L+ G+F K
Sbjct: 150 MWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER--GVTPDVACYNILIDGFFKK 207
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A E + E + + SV + + N +++ LC GKFDE+ +++ RMK
Sbjct: 208 GDILNASEIW-ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER----- 261
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L +++ + G CG G A V+++M E SPD + +N +++ + G + E E
Sbjct: 262 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 321
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M +G +Y +L+ FE +VD+ + + + + + Y LV L
Sbjct: 322 LWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 380
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
+ G L++A S + + +D +Y M+ L G+LDE V G+LD
Sbjct: 381 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDE----VAGVLDQ 429
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 155/345 (44%), Gaps = 29/345 (8%)
Query: 55 KGYFMKGMEEEAMECY---NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK 111
Y M ++A++ + +E G ++ + NS+L+AL + K+DEA F +
Sbjct: 61 HAYAKNSMPDQALDIFQRMHEIFGCQPGIR----SYNSLLNALIESNKWDEAESFFLYFE 116
Query: 112 NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCK 171
L+ NL ++N++ C + +F A E+ M SPD S+ LI+ L K
Sbjct: 117 T-----MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAK 171
Query: 172 NGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD-SGLRPNLA 230
NG +++A +L+ EM ++GV PD Y +L+D F+ + + + + +++ + PN+
Sbjct: 172 NGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIP 231
Query: 231 VYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGI 289
YN ++ L + G DE+ + M K + D +Y ++ L G LD + +
Sbjct: 232 SYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM 291
Query: 290 LDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAA----EAAKR 345
++G + G L + GR EE ++L + E+E E AK
Sbjct: 292 AENGVSPDVVVYNTMLNGYL-RAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKV 350
Query: 346 SARAAIASLIPSK--------FGDKVGGTEMADNANANEAASVAE 382
+I L+P K +G V G + N N+A S+ E
Sbjct: 351 DEAISIWELLPEKDCCADSMTYGVLVHG--LCKNGYLNKALSILE 393
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 128/262 (48%), Gaps = 13/262 (4%)
Query: 25 DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSA 84
+++ F FE + G+ + Y L+K K ++A E N G+ S + +
Sbjct: 107 EAESFFLYFETM-----GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFS 161
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
+++++L NG +ALKLFD M P + + ++ +N++ DG+ +G +A
Sbjct: 162 YG--TLINSLAKNGYMSDALKLFDEM-----PERGVTPDVACYNILIDGFFKKGDILNAS 214
Query: 145 EVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
E++ R + P+ S+N +I+ LCK G E+ E++ M D YTY L+
Sbjct: 215 EIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHG 274
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD 263
+D +++M ++G+ P++ VYN ++ ++ G ++E + +M K+
Sbjct: 275 LCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTV 334
Query: 264 ASYKFMMKALSDGGKLDEILEI 285
SY +++ L + K+DE + I
Sbjct: 335 VSYNILIRGLFENAKVDEAISI 356
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G +P V + ++ GFVR + R F + K G V Y +L+ G
Sbjct: 430 MTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSK--GCFPTVVTYNTLINGLSKA 487
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA E + + M + + +++ LC K D AL L+ + + P
Sbjct: 488 ERFSEAYALVKEMLQKGWKPNM--ITYSLLMNGLCQGKKLDMALNLWCQALEKGFKP--- 542
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ N++ G C G+ +DA++++ +M + C P+ ++ N L++ K A +
Sbjct: 543 --DVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASK 600
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++ + G+ PD +Y + + +R+ D + VD G+ P +N LV
Sbjct: 601 IWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 656
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 112/245 (45%), Gaps = 9/245 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D YS ++ G R+G D V + +++ + G + V +++ G+ E+A+
Sbjct: 403 DTFAYSSMINGLCREGRLDEVAGVLDQMTKH--GCKPNPYVCNAVINGFVRASKLEDALR 460
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ V + + V N++++ L +F EA L M + P N+ +++
Sbjct: 461 FFGNMVSKGCFP--TVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKP-----NMITYS 513
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
++ +G C + A+ ++ + E PD N +I LC +G + +A +LY EM +
Sbjct: 514 LLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 573
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
P+ T+ LM+ ++V + + + ++ GL+P++ YN + L + +A
Sbjct: 574 NCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDA 633
Query: 249 KSFFD 253
F +
Sbjct: 634 VGFLN 638
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
V A N D+AL +F RM + S+N + + ++ +A F
Sbjct: 59 VAHAYAKNSMPDQALDIFQRMHEIFG----CQPGIRSYNSLLNALIESNKWDEAESFFLY 114
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
SP+ ++N LI C+ +A+EL M +G +PD ++YG L+++ +
Sbjct: 115 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGY 174
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK--KLKMDDASYK 267
+ D F +M + G+ P++A YN L+ + G + A ++ ++K + + SY
Sbjct: 175 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 234
Query: 268 FMMKALSDGGKLDEILEI 285
M+ L GK DE EI
Sbjct: 235 VMINGLCKCGKFDESFEI 252
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 146/295 (49%), Gaps = 18/295 (6%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGVVS--DGVVYGSLMKGYFM 59
G V D Y+ L+ + G +D + R+ E GG V D V Y +++ G+F
Sbjct: 143 GCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAE-----GGTVCSPDVVAYNTVIDGFFK 197
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+G +A + + E V + V NSV+ ALC D+A +M N KR
Sbjct: 198 EGDVNKACDLFKEMV--QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN-----KR 250
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ N ++N + GY G++K+A+ VF++M + PD ++ + L+ LCK G + EA
Sbjct: 251 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 310
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+++ M+ KG NPD ++Y ++++ + D F M+ G+ P+ +N +
Sbjct: 311 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAY 370
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
GMLD+A F+ M +K D +Y+ ++ AL GK+D+ +E ++D G
Sbjct: 371 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 425
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 122/278 (43%), Gaps = 46/278 (16%)
Query: 5 GFVADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGS---------- 52
G V P V Y+ ++ GF ++GD + LF+E+ ++ G+ D V Y S
Sbjct: 178 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQR--GIPPDLVTYNSVVHALCKARA 235
Query: 53 -------------------------LMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
L+ GY G +EA+ + E S+ V
Sbjct: 236 MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM--RRHSILPDVVTL 293
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+ ++ +LC GK EA +FD M + P ++ S+N+M +GY +G D ++F
Sbjct: 294 SMLMGSLCKYGKIKEARDVFDTMAMKGQNP-----DVFSYNIMLNGYATKGCLVDMTDLF 348
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M +PD +FN I GML +A ++ EM D GV PD TY ++ A +
Sbjct: 349 DLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 408
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
++DD F +M+D G+ P+ YN L+ G+L
Sbjct: 409 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGIL 446
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Query: 133 GYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV- 190
G+C R +A+++ + E C PD S+N L+ LC G +A+ L M++ G
Sbjct: 121 GFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTV 180
Query: 191 -NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+PD Y ++D F+ V+ F++MV G+ P+L YN +V L + +D+A+
Sbjct: 181 CSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAE 240
Query: 250 SFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEI 285
+F MV K++ ++ +Y ++ S G+ E + +
Sbjct: 241 AFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 277
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 9/176 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+ D V S LM + G +F+ + K G D Y ++ GY KG
Sbjct: 284 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK--GQNPDVFSYNIMLNGYATKGCL 341
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ + ++ +G+ + N + A N G D+A+ +F+ M++ P +
Sbjct: 342 VDMTDLFDLMLGDGIAPDFYTF--NVQIKAYANCGMLDKAMIIFNEMRDHGVKP-----D 394
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ ++ + C G+ DA+E F +M + +PD ++N LI C +G+L + +
Sbjct: 395 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQ 450
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 22/175 (12%)
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
++P YTY +LMD C +R + +F +++ +GLR + + + L+ + DEA
Sbjct: 73 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA- 131
Query: 250 SFFDIMVKKLK-----MDDASYKFMMKALSDGGK---LDEILEIV---GGILDDGGIEFS 298
DI++ + D SY ++K+L + GK D +L ++ G + + ++
Sbjct: 132 --LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYN 189
Query: 299 EELQEFVK-------GELSKEGREEEVVK-LMEKKEREKAEAKAREAEAAEAAKR 345
+ F K +L KE + + L+ A KAR + AEA R
Sbjct: 190 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLR 244
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 152/320 (47%), Gaps = 10/320 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
AD V+++ ++ + D LF+E++ K G+ + V Y SL+ G +A
Sbjct: 220 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETK--GIRPNVVTYSSLISCLCSYGRWSDAS 277
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ ++ + + + V N+++DA GKF EA KL+D M P ++ ++
Sbjct: 278 QLLSDMI--EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP-----DIFTY 330
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + +G+C R A ++F M C PD +++N LI CK+ + + EL+ EMS
Sbjct: 331 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 390
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G+ D TY L+ F D+ F++MV G+ P++ Y+ L+ L G L++
Sbjct: 391 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 450
Query: 248 AKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A FD M K ++K+D Y M++ + GK+D+ ++ + G +
Sbjct: 451 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 510
Query: 307 GELSKEGREEEVVKLMEKKE 326
G SK +E L + KE
Sbjct: 511 GLCSKRLLQEAYALLKKMKE 530
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 8/235 (3%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
V SL+ GY +A+ ++ V + + +++ L + K EA+ L
Sbjct: 118 VTLSSLLNGYCHGKRISDAVALVDQMV--EMGYRPDTITFTTLIHGLFLHNKASEAVALV 175
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
DRM P NL ++ V+ +G C +G A+ + KM + D + FN +ID
Sbjct: 176 DRMVQRGCQP-----NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 230
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
LCK + +A L+ EM KG+ P+ TY L+ R D + M++ + P
Sbjct: 231 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 290
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
NL +N L+ V+ G EA+ +D M+K+ + D +Y ++ +LD+
Sbjct: 291 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 345
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 11/230 (4%)
Query: 9 DPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP +++Y L+ GF D ++FE + K D V Y +L+KG+ E+
Sbjct: 324 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK--DCFPDVVTYNTLIKGFCKSKRVEDG 381
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
E + E + + V +++ L ++G D A K+F +M ++ PP ++ +
Sbjct: 382 TELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP-----DIMT 434
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
++++ DG C G+ + A+EVF M + D + +I+ +CK G + + +L+ +S
Sbjct: 435 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 494
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
KGV P+ TY ++ + + +KM + G PN YN L+
Sbjct: 495 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 544
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D V Y+ L+ G DGD D ++F+++ GV D + Y L+ G G
Sbjct: 391 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD--GVPPDIMTYSILLDGLCNNGKL 448
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A+E ++ + S +K+ ++++ +C GK D+ LF + + P N
Sbjct: 449 EKALEVFDYM--QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP-----N 501
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N M G C + ++A + +KM E P++ ++N LI ++G A + EL
Sbjct: 502 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 561
Query: 184 EMSDKGVNPDEYTYGLL 200
EM D T GL+
Sbjct: 562 EMRSCRFVGDASTIGLV 578
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 10/206 (4%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV--NLGSFNVMADGYCGQGRF 140
S V N +L A+ KFD + L ++M+ RL + L ++N++ + +C + +
Sbjct: 46 SIVEFNKLLSAIAKMKKFDVVISLGEKMQ-------RLEIVHGLYTYNILINCFCRRSQI 98
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
A+ + KM + P ++ ++L++ C +++A L +M + G PD T+ L
Sbjct: 99 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 158
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKL 259
+ F N+ + +MV G +PNL Y +V L + G D A + + M K+
Sbjct: 159 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI 218
Query: 260 KMDDASYKFMMKALSDGGKLDEILEI 285
+ D + ++ +L +D+ L +
Sbjct: 219 EADVVIFNTIIDSLCKYRHVDDALNL 244
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 66/184 (35%), Gaps = 36/184 (19%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNN---------------------------------- 164
+ DAI +F M + R P + FN
Sbjct: 27 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86
Query: 165 -LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
LI+ C+ ++ A L G+M G P T L++ R+ D +MV+
Sbjct: 87 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEI 282
G RP+ + L+ L EA + D MV++ + + +Y ++ L G D
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206
Query: 283 LEIV 286
L ++
Sbjct: 207 LNLL 210
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 152/320 (47%), Gaps = 10/320 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
AD V+++ ++ + D LF+E++ K G+ + V Y SL+ G +A
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETK--GIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ ++ + + + V N+++DA GKF EA KL+D M P ++ ++
Sbjct: 316 QLLSDMI--EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP-----DIFTY 368
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + +G+C R A ++F M C PD +++N LI CK+ + + EL+ EMS
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G+ D TY L+ F D+ F++MV G+ P++ Y+ L+ L G L++
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 488
Query: 248 AKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A FD M K ++K+D Y M++ + GK+D+ ++ + G +
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Query: 307 GELSKEGREEEVVKLMEKKE 326
G SK +E L + KE
Sbjct: 549 GLCSKRLLQEAYALLKKMKE 568
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 8/235 (3%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
V SL+ GY +A+ ++ V + + +++ L + K EA+ L
Sbjct: 156 VTLSSLLNGYCHGKRISDAVALVDQMV--EMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
DRM P NL ++ V+ +G C +G A+ + KM + D + FN +ID
Sbjct: 214 DRMVQRGCQP-----NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
LCK + +A L+ EM KG+ P+ TY L+ R D + M++ + P
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
NL +N L+ V+ G EA+ +D M+K+ + D +Y ++ +LD+
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 11/230 (4%)
Query: 9 DPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP +++Y L+ GF D ++FE + K D V Y +L+KG+ E+
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK--DCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
E + E + + V +++ L ++G D A K+F +M ++ PP ++ +
Sbjct: 420 TELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP-----DIMT 472
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
++++ DG C G+ + A+EVF M + D + +I+ +CK G + + +L+ +S
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
KGV P+ TY ++ + + +KM + G PN YN L+
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D V Y+ L+ G DGD D ++F+++ GV D + Y L+ G G
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD--GVPPDIMTYSILLDGLCNNGKL 486
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A+E ++ + S +K+ ++++ +C GK D+ LF + + P N
Sbjct: 487 EKALEVFDYM--QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP-----N 539
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N M G C + ++A + +KM E P++ ++N LI ++G A + EL
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Query: 184 EMSDKGVNPDEYTYGLL 200
EM D T GL+
Sbjct: 600 EMRSCRFVGDASTIGLV 616
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 10/206 (4%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV--NLGSFNVMADGYCGQGRF 140
S V N +L A+ KFD + L ++M+ RL + L ++N++ + +C + +
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQ-------RLEIVHGLYTYNILINCFCRRSQI 136
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
A+ + KM + P ++ ++L++ C +++A L +M + G PD T+ L
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKL 259
+ F N+ + +MV G +PNL Y +V L + G D A + + M K+
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI 256
Query: 260 KMDDASYKFMMKALSDGGKLDEILEI 285
+ D + ++ +L +D+ L +
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNL 282
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 66/184 (35%), Gaps = 36/184 (19%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNN---------------------------------- 164
+ DAI +F M + R P + FN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 165 -LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
LI+ C+ ++ A L G+M G P T L++ R+ D +MV+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEI 282
G RP+ + L+ L EA + D MV++ + + +Y ++ L G D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 283 LEIV 286
L ++
Sbjct: 245 LNLL 248
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 125/250 (50%), Gaps = 9/250 (3%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
V D V +S +M F R G+ D F +KE G++ D V+Y L++GY KGM A
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE--AGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
M NE + + + M V N++L LC EA KLF+ M P +
Sbjct: 430 MNLRNEMLQQGCA--MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY-----T 482
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
++ DG+C G ++A+E+F+KM E R D +++N L+D K G + A+E++ +M
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
K + P +Y +L++A + + + +M+ ++P + + N ++ + G
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 247 EAKSFFDIMV 256
+ +SF + M+
Sbjct: 603 DGESFLEKMI 612
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 140/285 (49%), Gaps = 14/285 (4%)
Query: 4 KGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
KGF P VY+Y ++ G + G + +F E+ G+ D Y SL+ KG
Sbjct: 299 KGF--SPGVYTYNTVINGLCKHGKYERAKEVFAEMLR--SGLSPDSTTYRSLLMEACKKG 354
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E + +++ + V V +S++ +G D+AL F+ +K P +
Sbjct: 355 DVVETEKVFSDM--RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+ ++ GYC +G A+ + +M + C+ D +++N ++ LCK ML EA++L
Sbjct: 413 -----YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ EM+++ + PD YT +L+D ++ + + F+KM + +R ++ YN L+ +
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 242 VGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
VG +D AK + D++ K++ SY ++ AL G L E +
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+ D + L+ G + G+ LF+++KEK + D V Y +L+ G+ G
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK--RIRLDVVTYNTLLDGFGKVGDI 531
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A E + + V + + + ++ + +++ALC+ G EA +++D M +++ P + N
Sbjct: 532 DTAKEIWADMVSK--EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
M GYC G D KM PD +S+N LI + +++A L
Sbjct: 590 -----SMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 184 EMSDK--GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+M ++ G+ PD +TY ++ N++ + RKM++ G+ P+ + Y ++ V
Sbjct: 645 KMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVS 704
Query: 242 VGMLDEAKSFFDIMVKK 258
L EA D M+++
Sbjct: 705 QDNLTEAFRIHDEMLQR 721
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 148/327 (45%), Gaps = 11/327 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF + L+ VR G + + +++E+ G+ V ++M K +
Sbjct: 194 KGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI---NVYTLNIMVNALCKDGK 250
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E + + V E V V N+++ A + G +EA +L + M P K +
Sbjct: 251 MEKVGTFLSQVQE-KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM-----PGKGFSPG 304
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + +G C G+++ A EVF +M SPD+ ++ +L+ + CK G + E E+++
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFS 364
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M + V PD + +M +D YF + ++GL P+ +Y L+ + G
Sbjct: 365 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
M+ A + + M+++ MD +Y ++ L L E ++ + + S L
Sbjct: 425 MISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLT 484
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREK 329
+ G K G + ++L +K + ++
Sbjct: 485 ILIDGH-CKLGNLQNAMELFQKMKEKR 510
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 104/222 (46%), Gaps = 11/222 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y+ L+ GF + GD D ++ ++ K ++ + Y L+ KG EA
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSK--EILPTPISYSILVNALCSKGHLAEAFR 571
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
++E + +N +K + + NS++ C +G + ++M +E P + S+N
Sbjct: 572 VWDEMISKN--IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI-----SYN 624
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYR--CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+ G+ + A + +KM E + PD ++N+++ C+ + EAE + +M
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
++GVNPD TY +++ + + + +M+ G P+
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GFV D + Y+ L+ GFVR+ + F L ++++E+ GG+V D Y S++ G+ +
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 61 GMEEEA 66
+EA
Sbjct: 671 NQMKEA 676
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 141/290 (48%), Gaps = 10/290 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G D VV++ ++ GF GD RLFEE++++ G+ +D V + +L+ G
Sbjct: 348 MTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKR--GLAADRVTHTALINGLCRA 405
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA E V + + + V ++D C G EA ++ + M +R+
Sbjct: 406 GELKEADRVLQEMV--DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVG-----RRV 458
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A N+ ++ ++DG C QG + A E+ +M + ++N+LI+ LCK G L +A
Sbjct: 459 APNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMR 518
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EM G D YTY L+D + D ++M+D G++P++A YN L+
Sbjct: 519 IMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFC 578
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
G ++ K + M++K ++ + +Y +MK + EI G+
Sbjct: 579 MSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGM 628
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 14/263 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L G + GD L E+ K G+ + Y SL+ G G E+AM
Sbjct: 463 VTYTALSDGLCKQGDVRAANELLHEMCNK--GLELNVYTYNSLINGLCKFGNLEQAMRIM 520
Query: 71 NE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
E A G + V +++D LC +G+FD A + M + K + ++ ++N
Sbjct: 521 TEMEAAGHRTDV----YTYTTLIDTLCKSGEFDRAHNMLQEMLD-----KGIKPSIATYN 571
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
V+ +G+C GR + ++ M E P+ +++N+L+ Q C + + E+Y M +
Sbjct: 572 VLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQ 631
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
V P+E TY +L+ + + + + ++M++ GLR + Y+ L+ L + EA
Sbjct: 632 EVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEA 691
Query: 249 KSFFDIMVKK-LKMDDASYKFMM 270
+ FFD M + L + Y F M
Sbjct: 692 RVFFDKMRNEGLTAEPDVYSFYM 714
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Query: 46 DGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK 105
D V YG+++ GY ++G E A++ +E + ++ +A SV+ LCN G+ +AL+
Sbjct: 286 DVVTYGTMVHGYCVRGELENAVKLLDEMAAK--GLESNATVYTSVIALLCNKGQVSDALR 343
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
+ + M H +A++ F + G+C +G A +F +M + + D ++ L
Sbjct: 344 VLEDM-TMHG----VALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTAL 398
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
I+ LC+ G L EA+ + EM DKG++ D TY +L+D + + + +MV +
Sbjct: 399 INGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRV 458
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILE 284
PN+ Y L L + G + A M K L+++ +Y ++ L G L++ +
Sbjct: 459 APNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMR 518
Query: 285 IV 286
I+
Sbjct: 519 IM 520
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 121/299 (40%), Gaps = 51/299 (17%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA+ + E +N ++N +L AL + G+ +A + FD M + PP +
Sbjct: 241 DEAIALFRELPDKN------VCSHNILLKALLSAGRLKDACQHFDEMSS---PP-----D 286
Query: 124 LGSFNVMADGYCGQG-----------------------------------RFKDAIEVFR 148
+ ++ M GYC +G + DA+ V
Sbjct: 287 VVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLE 346
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
M + + D + F +I C G LA A L+ EM +G+ D T+ L++
Sbjct: 347 DMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAG 406
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYK 267
+ + ++MVD GL ++ Y L+ + G + EA + MV +++ + +Y
Sbjct: 407 ELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYT 466
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
+ L G + E++ + + G+E + + L K G E+ +++M + E
Sbjct: 467 ALSDGLCKQGDVRAANELLHEMCNK-GLELNVYTYNSLINGLCKFGNLEQAMRIMTEME 524
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 96/220 (43%), Gaps = 9/220 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ + G+ D + +E+ +K G+ Y LM G+ M G E
Sbjct: 527 GHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDK--GIKPSIATYNVLMNGFCMSGRVE 584
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ + +N V+ + V NS++ C + +++ M ++ +A N
Sbjct: 585 GGKKLLEWMLEKN--VRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQ-----EVAPNE 637
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ G+C K+A+ ++M E S++ LI L K +EA + +
Sbjct: 638 NTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDK 697
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
M ++G+ + Y MD F + ++ T ++V++
Sbjct: 698 MRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVEAS 737
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 143/320 (44%), Gaps = 10/320 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D Y+ L G + G D F+L +E+ E L V D V Y +L+ F
Sbjct: 310 GFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM-EHLSIVSPDVVTYNTLVDACFKYQRSS 368
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ E + VK S V +N V+ LC G+ +EAL M E LA ++
Sbjct: 369 DALNLLEEM--RDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEE-----GLAPDV 421
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + D YC A + +M DT + N L+ LCK EAEEL
Sbjct: 422 ITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRS 481
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+G PDE +YG +M A F+ N+ + + +M L P++ YN L+ L +G
Sbjct: 482 PPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGK 541
Query: 245 LDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L EA ++M K L DD +Y ++ A G L++ + +L++
Sbjct: 542 LTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNT 601
Query: 304 FVKGELSKEGREEEVVKLME 323
+ G L G+ E+ +KL E
Sbjct: 602 LMNG-LCLHGKLEKAIKLFE 620
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 27/241 (11%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G V D V YG++M YF + E A+ ++E + S N+++ LC GK
Sbjct: 486 GFVPDEVSYGTVMAAYFKENKPEPALYLWDEM--SKRKLTPSIYTYNTLIKGLCTIGKLT 543
Query: 102 EAL-KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
EA+ KL + MK K L + ++N++ YC +G + A + KM E PD +
Sbjct: 544 EAIDKLNELMK------KGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVV 597
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+ N L++ LC +G L +A +L+ ++KG D TY L+ A + VD +F M
Sbjct: 598 TCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADM 657
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLD 280
GL+P+ YN ++ L + G +EA++ M+ L + GKL
Sbjct: 658 EARGLQPDAFTYNVVLSALSEAGRSEEAQN------------------MLHKLDESGKLS 699
Query: 281 E 281
E
Sbjct: 700 E 700
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 142/317 (44%), Gaps = 13/317 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEEL-KEKLGGVVSDGVVYGSLMKGYFMKGM 62
+GFV D V Y +M + ++ + L++E+ K KL + Y +L+KG G
Sbjct: 485 RGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSI---YTYNTLIKGLCTIGK 541
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA++ NE + + + N ++ A C G ++A + ++M + P
Sbjct: 542 LTEAIDKLNELMKKG--LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKP----- 594
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ + N + +G C G+ + AI++F E D +++N LI LCK+G + A +
Sbjct: 595 DVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFF 654
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL--V 240
+M +G+ PD +TY +++ A E R ++ K+ +SG Y + V
Sbjct: 655 ADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEV 714
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+ G E KS + D SY +K L GG+L E ++ ++ G S
Sbjct: 715 KTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSST 774
Query: 301 LQEFVKGELSKEGREEE 317
++G + ++ R+
Sbjct: 775 YITLMEGLIKRQKRQTH 791
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 10/244 (4%)
Query: 80 VKMSAVANNSVLDALCNNGKFDE--ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
V+ S A N+VL AL + +L +F + RL N +FN++ +C +
Sbjct: 169 VRPSLQAANAVLSALARSPSTSPQASLDVFRSLIA-----LRLHPNHYTFNLLVHTHCSK 223
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G DA+ M + SPD +++N L+ C+ GML EA L M +G+ P TY
Sbjct: 224 GTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATY 283
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-- 255
L+ A + + M G P+L YN L L Q G +DEA D M
Sbjct: 284 NTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEH 343
Query: 256 VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
+ + D +Y ++ A + + L ++ + D G++ S V L +EG+
Sbjct: 344 LSIVSPDVVTYNTLVDACFKYQRSSDALNLLEE-MRDKGVKSSLVTHNIVVKGLCREGQL 402
Query: 316 EEVV 319
EE +
Sbjct: 403 EEAL 406
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 165/338 (48%), Gaps = 29/338 (8%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGFV D Y+ ++ GD + L E+ + +V D ++ G +G+
Sbjct: 376 KGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN--NLVLDSTTQTIMICGLCKRGLV 433
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAM+ ++E +GE+ + + N+++D G+ +EA LF +M+ +NP L +
Sbjct: 434 DEAMQIFDE-MGEHGC-DPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLT 491
Query: 124 LG--------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
LG S + C G+ A ++ R + + PD +++N LI+ LCK L
Sbjct: 492 LGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNL 551
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
A L+ E+ KG++PDE TYG L+D +R +D F+ ++ SG P+L++YN +
Sbjct: 552 DGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSM 611
Query: 236 VGKLVQVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKA--LSDGGKLDEILEIVGGILDD 292
+ L ++ L +A + + D + KK Y F +++ L++ K EI G LDD
Sbjct: 612 MRSLCRMKKLSQAINLWLDYLPKK-------YNFPVESEVLANAHK-----EIEDGSLDD 659
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKA 330
G E + QE+ G +S ++ L + + + A
Sbjct: 660 GVRELIKIDQEY--GSISSNPYTIWLIGLCQVRRTDDA 695
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 14/304 (4%)
Query: 22 RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVK 81
R D+ F +E + + VY +++K G+ A+ YN V +
Sbjct: 152 RHADAVQAFSRMDEFQSR-----PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPN 206
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
+ N ++D LC G +ALK+FD M + P N+ + V+ C G+
Sbjct: 207 RATY--NVLMDGLCKQGMAGDALKMFDEMLDRGIMP-----NVKIYTVLLSSLCNAGKID 259
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
+A+++ M + C PD +++N + LCK G + EA + + D G Y L+
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LK 260
D F+ R D+G Y++ M++ + P++ +Y ++ + G +++A SF D+M KK
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV 379
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
D Y ++K L D G L+ + +L + + Q + L K G +E ++
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN-NLVLDSTTQTIMICGLCKRGLVDEAMQ 438
Query: 321 LMEK 324
+ ++
Sbjct: 439 IFDE 442
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 9/255 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + +Y+ L+ G D +L +K+K G + D V Y + + G
Sbjct: 233 MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDK--GCLPDEVTYNAFLSGLCKV 290
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + + ++ + + ++D L +FDE + M + P
Sbjct: 291 GRVNEAFQ--RLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP--- 345
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + +M G GR +DA+ M + PDT +N ++ LC +G L A
Sbjct: 346 --DVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHT 403
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM + D T +++ + VD+ F +M + G P + YN L+
Sbjct: 404 LRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFY 463
Query: 241 QVGMLDEAKSFFDIM 255
+ G L+EA+ F M
Sbjct: 464 REGRLEEARMLFHKM 478
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 150/317 (47%), Gaps = 10/317 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V+Y+ L+ GF + G++ ++LF E++ + +V D + + +L+ G
Sbjct: 206 MMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAR--EIVPDSIAFSALICGLSGS 263
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + +NE + + V +++D C G+ +A L ++M P
Sbjct: 264 GKVVEADKLFNEMI--KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTP--- 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ +ADG C G A E+ +M + ++N +++ LCK G + +A +
Sbjct: 319 --NVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVK 376
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM + G++PD TY LMDA ++ + R+M+D GL+P + +N L+ L
Sbjct: 377 LMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLC 436
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
G L++ + M++K M + A+Y +MK + EI G+ G + S
Sbjct: 437 MSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSN 496
Query: 300 ELQEFVKGELSKEGREE 316
+KG +E
Sbjct: 497 TYNILIKGHCKARNMKE 513
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 10/275 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ LM R G L ++ K G + D V Y +++ GY G ++ ++ E
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFK--GCIPDVVSYTTIIDGYCHVGELQKVVQLVKE 170
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ +K + +S++ LC +GK E K+ M P + + + D
Sbjct: 171 M--QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVI-----YTTLID 223
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G+C G + A ++F +M PD+++F+ LI L +G + EA++L+ EM KG P
Sbjct: 224 GFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEP 283
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
DE TY L+D ++ + +MV GL PN+ Y L L + G LD A
Sbjct: 284 DEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELL 343
Query: 253 DIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
M +K L+++ ++Y ++ L G + + ++++
Sbjct: 344 HEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLM 378
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 121/264 (45%), Gaps = 9/264 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + Y+ ++ G + G+ +L EE+KE G+ D + Y +LM Y+
Sbjct: 346 MCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKE--AGLHPDTITYTTLMDAYYKT 403
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A E E + + ++ + V N +++ LC +GK ++ +L M + P
Sbjct: 404 GEMVKARELLREML--DRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMP--- 458
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++N + YC + + + E++R M PD+ ++N LI CK + EA
Sbjct: 459 --NAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWF 516
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM +K N +Y L+ F+ ++ + F +M GL + +YN V
Sbjct: 517 LHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNY 576
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA 264
+ G ++ D ++K +D A
Sbjct: 577 EEGNMETTLELCDEAIEKCLLDKA 600
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 13/241 (5%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE-- 102
SD V+ + G+ EA + +++ + N V +SA + N L C + K D
Sbjct: 37 SDPHVFDVFFQVLVEAGLLNEARKFFDKLL--NYGVALSAGSCNLYLT--CLSSKRDMLG 92
Query: 103 -ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
LK+F P + N S+N++ + G+ ++A + +M C PD +S
Sbjct: 93 MVLKVFSEF-----PQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVS 147
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ +ID C G L + +L EM KG+ P+ YTY ++ + +V +G R+M+
Sbjct: 148 YTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMM 207
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLD 280
G+ P+ +Y L+ ++G A F M +++ D ++ ++ LS GK+
Sbjct: 208 KRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVV 267
Query: 281 E 281
E
Sbjct: 268 E 268
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 160/347 (46%), Gaps = 65/347 (18%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDS-DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
M KGFV D YS + +GF+ D + F LFEE+K G+V Y L+ +
Sbjct: 451 MMGKGFVPDDSTYSKV-IGFLCDASKVEKAFSLFEEMKR--NGIVPSVYTYTILIDSFCK 507
Query: 60 KGMEEEAMECYNEAVGENSS---------------------------------VKMSAVA 86
G+ ++A + ++E + + + K + V
Sbjct: 508 AGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVT 567
Query: 87 NNSVLDALCNNGKFDEALKLFDRM-------------KNEHNPPKRLAVNLGSFNVMADG 133
+++D C G+ ++A +++ RM K +HN + N+ ++ + DG
Sbjct: 568 YTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCE--GPNVITYGALVDG 625
Query: 134 YCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD 193
C R K+A E+ M + C P+ + ++ +ID CK G L +A+E++ +MS++G +P+
Sbjct: 626 LCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPN 685
Query: 194 EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
YTY +D F+ NR+D KM+++ PN+ +Y +V L ++G DEA +
Sbjct: 686 LYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEA---YK 742
Query: 254 IMVKKLKMDD-------ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+M LKM++ +Y M+ GK+++ LE+ + G
Sbjct: 743 LM---LKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKG 786
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 123/304 (40%), Gaps = 56/304 (18%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ L+ +++ LFE + L G + V Y +L+ G+
Sbjct: 521 MLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMML--LEGCKPNVVTYTALIDGHCKA 578
Query: 61 GMEEEAMECYNEAVGENSSVKM--------------SAVANNSVLDALCNNGKFDEALKL 106
G E+A + Y G+ S M + + +++D LC + EA +L
Sbjct: 579 GQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHEL 638
Query: 107 FDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY------------- 153
D M P ++ ++ + DG+C G+ +DA EVF KM E
Sbjct: 639 LDTMLAHGCEPNQIV-----YDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFI 693
Query: 154 ----------------------RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
C+P+ + + ++D LCK G EA +L +M +KG N
Sbjct: 694 DCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCN 753
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P+ TY ++D + +++ FR M G PN Y L+ G+LDEA
Sbjct: 754 PNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKL 813
Query: 252 FDIM 255
D M
Sbjct: 814 LDEM 817
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 149/336 (44%), Gaps = 39/336 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + +VY ++ GF + G +F ++ E+ G + Y S + F
Sbjct: 642 MLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSER--GYSPNLYTYSSFIDCLFKD 699
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ ++ ++ + ENS + V ++D LC GK DEA KL +M+ + P
Sbjct: 700 NRLDLVLKVLSKML-ENSCTP-NVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNP--- 754
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ M DG+ G+ + +E+FR M C+P+ +++ LI+ C NG+L EA +
Sbjct: 755 --NVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYK 812
Query: 181 LYGEMSD--------------KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
L EM +G + + T L+D E V + Y R ++D+ ++
Sbjct: 813 LLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPVDSLY-RILIDNYIK 871
Query: 227 PNLAVYNRLVGKL-VQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
G+L V + +L+E S V + Y +++ LS K+D+ LE+
Sbjct: 872 ---------AGRLEVALDLLEEISSSPSHAVS----NKYLYASLIENLSHASKVDKALEL 918
Query: 286 VGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
++ + L +KG L K + +E ++L
Sbjct: 919 YASMISKNVVPELSILVHLIKG-LIKVDKWQEALQL 953
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 130/336 (38%), Gaps = 53/336 (15%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKL-----GGVVSDGVVYGSLMKGYFMK 60
FV D V Y+ ++ G LFEE + L + + V Y L+ G K
Sbjct: 275 FVPDTVFYNRMVSGLCEAS-------LFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRK 327
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM---------- 110
G + + E NS++ A C + + A KLF +M
Sbjct: 328 GQLGRCKRILSMMITEGCYPNREIF--NSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 385
Query: 111 ----------KNEHNPPKR--------------LAVNLGSFNV--MADGYCGQGRFKDAI 144
NE P L V L NV A CG G+F A
Sbjct: 386 VYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAF 445
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
++ +M PD +++ +I LC + +A L+ EM G+ P YTY +L+D+
Sbjct: 446 KIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSF 505
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
+ + +F +M+ G PN+ Y L+ ++ + A F++M+ + K +
Sbjct: 506 CKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNV 565
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+Y ++ G++++ +I + G IE S+
Sbjct: 566 VTYTALIDGHCKAGQIEKACQIYARM--RGDIESSD 599
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 135/297 (45%), Gaps = 25/297 (8%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+Y+ ++ G + G +D ++L +++EK G + V Y +++ G+ G E+ +E +
Sbjct: 722 VIYTEMVDGLCKIGKTDEAYKLMLKMEEK--GCNPNVVTYTAMIDGFGKSGKIEQCLELF 779
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + + +++ C+NG DEA KL D MK + P L S +
Sbjct: 780 RDMCSKGCAPNF--ITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHIL-----SHRKI 832
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ F +I + ++ E P + LID K G L A +L E+S
Sbjct: 833 IEGF--SQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPS 890
Query: 191 N--PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+ ++Y Y L++ ++VD + M+ + P L++ L+ L++V EA
Sbjct: 891 HAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEA 950
Query: 249 KSFFDIMVKKLKMDDASYKFMMKALSD--GGKLDEILEIVGGILDDGGIEFSEELQE 303
L++ D+ + + L + G+ +E++++V + + SEE+ E
Sbjct: 951 ----------LQLSDSICQMDIHWLQEKATGRTEEMVKLVIAAMVEAETGVSEEILE 997
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 131/325 (40%), Gaps = 50/325 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + +++ L+ + + D ++LF+++ + G G L+ F+
Sbjct: 340 MITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKM-------IKCGCQPGYLVYNIFIG 392
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLD---------------ALCNNGKFDEALK 105
+ C NE + + + A + +LD LC GKFD+A K
Sbjct: 393 SV------CSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFK 446
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
+ M + P +++ + C + + A +F +M P ++ L
Sbjct: 447 IICEMMGKGFVPDD-----STYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTIL 501
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
ID CK G++ +A + + EM KG P+ TY L+ A + ++ F M+ G
Sbjct: 502 IDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGC 561
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFF-----DI----MVKKLKMDD--------ASYKF 268
+PN+ Y L+ + G +++A + DI M K K+D +Y
Sbjct: 562 KPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGA 621
Query: 269 MMKALSDGGKLDEILEIVGGILDDG 293
++ L ++ E E++ +L G
Sbjct: 622 LVDGLCKANRVKEAHELLDTMLAHG 646
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 101/242 (41%), Gaps = 15/242 (6%)
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
+LC GK EA L D ++ + +N M G C F++A+++ +M
Sbjct: 255 SLCKGGKCREAFDLIDEAED-------FVPDTVFYNRMVSGLCEASLFEEAMDILHRMRS 307
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
C P+ +++ L+ + G L + + M +G P+ + L+ A +
Sbjct: 308 SSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSY 367
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLV------QVGMLDEA-KSFFDIMVKKLKMDDAS 265
F+KM+ G +P VYN +G + +LD K++ +++ + ++ +
Sbjct: 368 AYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVN 427
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKK 325
+ L GK D+ +I+ ++ G + + V G L + E+ L E+
Sbjct: 428 VSNFARCLCGAGKFDQAFKIICEMMGKGFVP-DDSTYSKVIGFLCDASKVEKAFSLFEEM 486
Query: 326 ER 327
+R
Sbjct: 487 KR 488
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 7/169 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N ++ C NG ++ AL+ R+K+ P + ++N + + + A V
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQ-----TTYNALIQVFLRADKLDTAYLVK 234
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
R+M Y D + + LCK G EA +L E D PD Y ++ E
Sbjct: 235 REMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAED--FVPDTVFYNRMVSGLCEA 292
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
+ ++ +M S PN+ Y L+ ++ G L K +M+
Sbjct: 293 SLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMI 341
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 66/165 (40%), Gaps = 7/165 (4%)
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
N L+ + C+NG A E G + D G P + TY L+ +++D R+M+
Sbjct: 179 LNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREML 238
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM--VKKLKMDDASYKFMMKALSDGGKL 279
+ + L + G EA FD++ + D Y M+ L +
Sbjct: 239 SYAFVMDRYTLSCFAYSLCKGGKCREA---FDLIDEAEDFVPDTVFYNRMVSGLCEASLF 295
Query: 280 DEILEIVGGILDDGGIEFSEELQEFVKGELSK--EGREEEVVKLM 322
+E ++I+ + I + + G L K GR + ++ +M
Sbjct: 296 EEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMM 340
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 133/264 (50%), Gaps = 17/264 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGFV D V Y L+ G +GD + LF E + K + D VVY SL+KG +G+
Sbjct: 248 KGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAK--DLKPDLVVYNSLVKGLCRQGLI 305
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF-DEALKLFDRMKNEHNPPKRLAV 122
A++ NE V + + N V++ LC G D A+ + D + + P
Sbjct: 306 LHALQVMNEMVEDGCHPDIWTY--NIVINGLCKMGNISDAAVVMNDAIVKGYLP------ 357
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ +FN M DGYC + + A+++ +M Y +PD +++N++++ LCK G E E +
Sbjct: 358 DVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETF 417
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM KG P+ TY +L++ ++N++++ + +M GL P+ +N L+ +
Sbjct: 418 EEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRN 477
Query: 243 GMLDEAKSFFDIMVKKLKMDDASY 266
G LD A F K+D+ Y
Sbjct: 478 GDLDGAYLLFQ------KLDEKGY 495
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 123/258 (47%), Gaps = 13/258 (5%)
Query: 2 FVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
VKG++ D ++ ++ G+ + D +L E + + G+ D + Y S++ G G
Sbjct: 351 IVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMW--MYGIAPDAITYNSVLNGLCKAG 408
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
+E E + E + + + +A+ N +++ C + +EA + RM + P +
Sbjct: 409 KAKEVNETFEEMILKGC--RPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTI- 465
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGE--YRCSPDTLSFNNLIDQLCKNGMLAEAE 179
SFN + G+C G A +F+K+ E Y + DT FN LI + AE
Sbjct: 466 ----SFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADT--FNILIGAYSSKLNMQMAE 519
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+++GEM KG PD YTY +L+D + VD + +MV G P++A + R++ L
Sbjct: 520 KIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSL 579
Query: 240 VQVGMLDEAKSFFDIMVK 257
+ EA + IMV+
Sbjct: 580 AMNHRVSEAVAIIHIMVR 597
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 11/279 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G P+ Y ++ G G LF+E+ + V D + +++ KG
Sbjct: 74 RGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRR--DVFPDVATFNNVLHALCQKGDI 131
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+ + + SV + N + LC G+ +EA+ L + M +A +
Sbjct: 132 MESGALLAKVLKRGMSV--NKFTCNIWIRGLCEGGRLEEAVALVESMD------AYIAPD 183
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + G C + ++A + R+M C PD ++N +ID CK ML EA EL
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ KG PD TY L++ V+ F + L+P+L VYN LV L + G
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 303
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
++ A + MV+ D +Y ++ L G + +
Sbjct: 304 LILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISD 342
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 107/237 (45%), Gaps = 9/237 (3%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+A A N+++DAL N D+A K++ RM + P + + V +C GR
Sbjct: 9 AAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAP-----DARTHTVRIKSFCITGRPHV 63
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ + R + E C L++ ++ L +G +A L+ EM + V PD T+ ++
Sbjct: 64 ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMD 262
A + + + K++ G+ N N + L + G L+EA + + M + D
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPD 183
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIE----FSEELQEFVKGELSKEGRE 315
+Y +M+ L K+ E + + +++ G I ++ + + K ++ +E E
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATE 240
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 12/221 (5%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M + C P ++N ++D L +A ++Y M GV PD T+ + + + R
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
R + + G Y +V L G +A+ FD M+++ + D A++
Sbjct: 61 PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
++ AL G + E ++ +L G +++G L + GR EE V L+E +
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRG-LCEGGRLEEAVALVESMDAY 179
Query: 329 KA----------EAKAREAEAAEAAKRSARAAIASLIPSKF 359
A ++++ EAA+ R IP F
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDF 220
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 18/295 (6%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGVVS--DGVVYGSLMKGYFM 59
G V D YS L+ + G +D + R+ E GG V D V Y +++ G+F
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE-----GGAVCSPDVVAYNTVIDGFFK 231
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+G +A + + E V + V +SV+ ALC D+A +M N+ P
Sbjct: 232 EGDVNKACDLFKEMV--QRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP-- 287
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N ++N + GY G++K+A+ VF++M PD ++FN L+ LCK G + EA
Sbjct: 288 ---NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEAR 344
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+++ M+ KG NPD ++Y ++++ + D F M+ G+ P + +N L+
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 404
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
GMLD+A F+ M +K + +Y ++ AL GK+D+ +E ++D G
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQG 459
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 129/280 (46%), Gaps = 10/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V YS ++ + D ++ K GV+ + Y +L+ GY
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK--GVLPNNWTYNNLIYGYSST 302
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + E S+ V N ++ +LC GK EA +FD M + P
Sbjct: 303 GQWKEAVRVFKEM--RRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNP--- 357
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+N+M +GY +G D ++F M +P +FN LI GML +A
Sbjct: 358 --DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMI 415
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM D GV P+ TY ++ A + ++DD F +M+D G+ P+ Y+ L+
Sbjct: 416 IFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFC 475
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
G L +AK +IM + +D + ++ L G++
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV 515
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 146/333 (43%), Gaps = 11/333 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G + + Y+ ++ R G D F ++ ++ GV D Y L++G+ G
Sbjct: 423 HGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQ--GVAPDKYAYHCLIQGFCTHGSL 480
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A E +E + N+ + + V +S+++ LC G+ +A +FD N P +
Sbjct: 481 LKAKELISEIM--NNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVV-- 536
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++++ DGYC G+ + A+ VF M P+ + + L++ CK G + E L+
Sbjct: 537 ---YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KG+ P Y +++D FE R F +M +SG+ N Y+ ++ L +
Sbjct: 594 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNR 653
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
DEA F ++ +K+D + M+ + +++E ++ I G +
Sbjct: 654 CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYS 713
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
+ L KEG EE + + E +R
Sbjct: 714 IMIT-NLIKEGLVEEAEDMFSSMQNAGCEPDSR 745
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L V++ N + G+C R +A+++ + E C PD S++ L+ LC G +A
Sbjct: 142 LRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201
Query: 179 EELYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++L M++ G +PD Y ++D F+ V+ F++MV G+ P+ Y+ +V
Sbjct: 202 DDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVV 261
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
L + +D+A++F MV K + ++ +Y ++ S G+ E + +
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRV 311
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 9/220 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VVY L+ G+ + G D LF E+ +K G+ ++Y ++ G F
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQK--GIKPSTILYNIIIDGLFEA 617
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A ++E S + M+ + VL L N FDEA+ LF ++ + +
Sbjct: 618 GRTVPAKVKFHEMT--ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMN-----V 670
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ + N M G R ++A ++F + P ++++ +I L K G++ EAE+
Sbjct: 671 KIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAED 730
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++ M + G PD ++ + N + Y K+
Sbjct: 731 MFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 770
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 15/134 (11%)
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
++P +TY +LMD C +R + +F +++ +GLR ++ + N L+ + DEA
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA- 165
Query: 250 SFFDIMVKKLK-----MDDASYKFMMKALSDGGK---LDEILEIV---GGILDDGGIEFS 298
DI++ + D SY ++K+L D GK D++L ++ G + + ++
Sbjct: 166 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYN 223
Query: 299 EELQEFVK-GELSK 311
+ F K G+++K
Sbjct: 224 TVIDGFFKEGDVNK 237
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 149/322 (46%), Gaps = 12/322 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K D V Y+ ++ G + D RL EE+ + G + Y +++ G+
Sbjct: 38 KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDN--GFAPNVFSYNTVLHGFCKANRV 95
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A+ + V + V+ +V++ LC + DEA ++ D+M P N
Sbjct: 96 ENALWLLEQMVMRGCPPDV--VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQP-----N 148
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + DG+C G A+E+ RKM E P+ +++NN++ LC L A +L+
Sbjct: 149 VITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFK 208
Query: 184 EMSDKG-VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM + G PD +TY ++D+ + +VDD MV G PN+ Y+ L+ L +
Sbjct: 209 EMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKA 268
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G LDEA + M + + +Y ++ G++DE ++ ++ DGG + +
Sbjct: 269 GKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV-DGGCQPNVVT 327
Query: 302 QEFVKGELSKEGREEEVVKLME 323
+ K G+ E+ + L+E
Sbjct: 328 YTVLLDAFCKCGKAEDAIGLVE 349
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 138/282 (48%), Gaps = 9/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + Y L+ GF R GD DG L ++ E+ G + + Y ++M G
Sbjct: 140 MIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER--GYRPNAITYNNIMHGLCSG 197
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ A++ + E + E+ S ++++D+L +GK D+A +L + M ++ P
Sbjct: 198 RKLDSALQLFKE-MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSP--- 253
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +++ + G C G+ +A + ++M CSP+ +++N +ID CK G + EA
Sbjct: 254 --NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYH 311
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM D G P+ TY +L+DA + + +D MV+ G PNL YN L+
Sbjct: 312 LLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFC 371
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDE 281
+ ++ A M++K + + SY ++ L K+ E
Sbjct: 372 KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHE 413
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 144/327 (44%), Gaps = 10/327 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G+ + + Y+ +M G D +LF+E++E G D Y +++ G
Sbjct: 178 RGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEES-GSCPPDVFTYSTIVDSLVKSGKV 236
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A V + S + V +S+L LC GK DEA L RM P N
Sbjct: 237 DDACRLVEAMVSKGCSP--NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP-----N 289
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + DG+C GR +A + +M + C P+ +++ L+D CK G +A L
Sbjct: 290 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 349
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +KG P+ +TY L+D + + V+ M+ G PN+ YN ++ L +
Sbjct: 350 VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKAT 409
Query: 244 MLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+ E + M+ + D ++ ++ A+ ++D E+ I + G
Sbjct: 410 KVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYN 469
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREK 329
V G L K R ++ L+ + R++
Sbjct: 470 SLVHG-LCKSRRFDQAEYLLREMTRKQ 495
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 132/301 (43%), Gaps = 28/301 (9%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V YS L+ G + G D L + + G + V Y +++ G+
Sbjct: 246 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR--SGCSPNIVTYNTIIDGHCKL 303
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA E V + + + V +LDA C GK ++A+ L + M + P
Sbjct: 304 GRIDEAYHLLEEMV--DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP--- 358
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL ++N + D +C + + A ++ M + C P+ +S+N +I LCK + E
Sbjct: 359 --NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL 416
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M PD T+ ++DA + RVD F + +SG PNL YN LV L
Sbjct: 417 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 476
Query: 241 QVGMLDEAKSFF-----------DIMVKKLKMD--------DASYKFMMKALSDGGKLDE 281
+ D+A+ DI+ +D D +YK ++ LSDG D+
Sbjct: 477 KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD 536
Query: 282 I 282
+
Sbjct: 537 V 537
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 132/281 (46%), Gaps = 11/281 (3%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
V+ S+++G G +A+ + E + + +V N++++ L + + D+A++L +
Sbjct: 12 VHKSILRGLCDAGQCSDAVLHFREM---SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLE 68
Query: 109 RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
M + P N+ S+N + G+C R ++A+ + +M C PD +S+ +I+
Sbjct: 69 EMVDNGFAP-----NVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVING 123
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
LCK + EA + +M +G P+ TYG L+D V +D RKM + G RPN
Sbjct: 124 LCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPN 183
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIMVK--KLKMDDASYKFMMKALSDGGKLDEILEIV 286
YN ++ L LD A F M + D +Y ++ +L GK+D+ +V
Sbjct: 184 AITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLV 243
Query: 287 GGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
++ G + G L K G+ +E L+++ R
Sbjct: 244 EAMVSKGCSPNVVTYSSLLHG-LCKAGKLDEATALLQRMTR 283
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 148/332 (44%), Gaps = 19/332 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y+ ++ G + G D + L EE+ + GG + V Y L+ +
Sbjct: 281 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD--GGCQPNVVTYTVLLDAFCKC 338
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A+ E + E V + NS+LD C + + A +L M + P
Sbjct: 339 GKAEDAIG-LVEVMVEKGYVP-NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP--- 393
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ S+N + G C + + + + +M C PD ++FN +ID +CK + A E
Sbjct: 394 --NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYE 451
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV-DSGLRPNLAVYNRLVGKL 239
L+ + + G P+ TY L+ + R D R+M G P++ YN ++ L
Sbjct: 452 LFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGL 511
Query: 240 VQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE---ILEI-VGGILDDGG 294
+ +D A K F ++ L DD +Y ++ +L +DE +LE+ + D G
Sbjct: 512 CKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGA 571
Query: 295 IEFSEELQEFVK-GELSKEGREEEVVKLMEKK 325
I + + F K G L K E+++L+ K
Sbjct: 572 ITYGTLIDGFCKTGNLDK---ALEILQLLLSK 600
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 120/299 (40%), Gaps = 40/299 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V D V ++ ++ + D + LF ++E G + V Y SL+ G K
Sbjct: 421 MLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE--SGCTPNLVTYNSLVHG-LCK 477
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ E + + N+V+D LC + + D A KLF +M ++ P +
Sbjct: 478 SRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 537
Query: 121 AVNLG------------------------------SFNVMADGYCGQGRFKDAIEVFRKM 150
++ ++ + DG+C G A+E+ + +
Sbjct: 538 TYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLL 597
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
PD ++F+ ID L K G L +A EL M G+ PD TY L+ + +R
Sbjct: 598 LSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRT 657
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK-MDDASYKF 268
+D F M G P+ A Y LVG LV + KS+ D++ + K M D +K
Sbjct: 658 EDAVDLFEVMRQCGCEPDNATYTTLVGHLV------DKKSYKDLLAEVSKSMVDTGFKL 710
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 2/177 (1%)
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
K L + G + G C G+ DA+ FR+M + C PD++++N +I+ L K+ L +
Sbjct: 4 KGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK-TCPPDSVTYNTMINGLSKSDRLDD 62
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A L EM D G P+ ++Y ++ + NRV++ +MV G P++ Y ++
Sbjct: 63 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVIN 122
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L ++ +DEA D M+++ + + +Y ++ G LD +E+V + + G
Sbjct: 123 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 11/271 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G A+ V YS ++ G ++ G + + ++++ G + D V Y +L+ G+F +
Sbjct: 273 GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD--AGCLPDAVTYNTLIDGFFKRQRLR 330
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ E + + S V ++ LC +G+FDEA+++ D M P N
Sbjct: 331 EAVGLLREML--EAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAP-----NA 383
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMG-EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++ + DG C GR +A+ F KM + +P ++++ LID LCK G + EA E
Sbjct: 384 ITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLE 443
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M G PD T+ +L++ + R+D G FR M + G P++ Y LV +L +
Sbjct: 444 RMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRAS 503
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
+DEA F M L D ++ + M+ L
Sbjct: 504 RVDEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 151/337 (44%), Gaps = 9/337 (2%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF V YS L+ G RD + D +L EE+ + G + V Y +L+ +G +
Sbjct: 96 GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGR--GCAPNAVTYNTLVNALLGQGRSK 153
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + ++ + ++ LC G+ + A ++ D M + L+ ++
Sbjct: 154 EAFSLLEQMAANGCPPEL--ITFGLIIKGLCKEGEIEAAFRVVDEMFMIESG---LSPDV 208
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN + DG C + R DA VF++ E C P+ ++++ LID L K + EA +L +
Sbjct: 209 ITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAK 268
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + G + TY ++D +V R++D R+M D+G P+ YN L+ +
Sbjct: 269 MVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQR 328
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L EA M++ +Y + L G+ DE +EI+ + G +
Sbjct: 329 LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS 388
Query: 304 FVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAA 340
V G L K GR E + EK R++ A A +A
Sbjct: 389 IVDG-LCKAGRVTEALGYFEKMARDEVVAPHVIAYSA 424
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 8/281 (2%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y+ L+ + G S F L E++ G + + +G ++KG +G
Sbjct: 130 RGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAAN--GCPPELITFGLIIKGLCKEGEI 187
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A +E S + + NSVLD LC + +A +F R P N
Sbjct: 188 EAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRP-----N 242
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +++ + DG + +A+++ KM E C +T++++ ++D L K G + +A +
Sbjct: 243 VVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLR 302
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M D G PD TY L+D F+ R+ + R+M+++G P++ Y L L + G
Sbjct: 303 QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG 362
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEIL 283
DEA D M + +A +Y ++ L G++ E L
Sbjct: 363 RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 403
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 151/342 (44%), Gaps = 38/342 (11%)
Query: 19 GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENS 78
G + D LF+++ +K + D V YG+L+ G + +EA + + EA +
Sbjct: 4 GLCKSRKVDKAITLFKQMVDK--AIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGC 61
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMK--------------------NEHNPPK 118
+ V N+++D LC G+ + AL L+D M +H K
Sbjct: 62 HP--TVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDK 119
Query: 119 -----------RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
A N ++N + + GQGR K+A + +M C P+ ++F +I
Sbjct: 120 GCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIK 179
Query: 168 QLCKNGMLAEAEELYGE--MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
LCK G + A + E M + G++PD T+ ++D + R+ D F++ ++ G
Sbjct: 180 GLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILE 284
RPN+ Y+ L+ L ++ +DEA MV+ + + +Y ++ L G++++ +
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 299
Query: 285 IVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
++ + D G + + + G ++ E V L E E
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 341
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 120/250 (48%), Gaps = 10/250 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D V Y+ L+ GF + L E+ E G V Y +L G G +
Sbjct: 308 GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE--AGFHPSVVTYTTLCHGLCRSGRFD 365
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVN 123
EA+E + + +A+ +S++D LC G+ EAL F++M ++E P +A
Sbjct: 366 EAVEILDYMAARGCAP--NAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIA-- 421
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ + DG C G+ +A E +M PD ++F+ LI+ LC G + EL+
Sbjct: 422 ---YSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFR 478
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M+++G PD TY L+D +RVD+ F++M GL P+ + ++ L++V
Sbjct: 479 GMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVN 538
Query: 244 MLDEAKSFFD 253
++AK D
Sbjct: 539 RDEDAKRIQD 548
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 136/292 (46%), Gaps = 11/292 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V YS L+ G + D +L ++ E G ++ V Y +++ G G
Sbjct: 237 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL--GCRANTVTYSTVVDGLLKVGRM 294
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A+ + ++ AV N+++D + EA+ L M P +
Sbjct: 295 EDAVVVLRQM--RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHP-----S 347
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + G C GRF +A+E+ M C+P+ +++++++D LCK G + EA +
Sbjct: 348 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 407
Query: 184 EMS-DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M+ D+ V P Y L+D + ++D+ + +M+ +G P++ ++ L+ L
Sbjct: 408 KMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 467
Query: 243 GMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
G +D F M ++ + D +Y ++ L ++DE ++ + DG
Sbjct: 468 GRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDG 519
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 7/199 (3%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
++D LC + K D+A+ LF +M ++ P ++ ++ + DG Q R K+A ++F +
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYP-----DVVTYGALIDGLGKQRRVKEAYDLFEE 55
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK-GVNPDEYTYGLLMDACFEVN 208
C P +++N +ID LCK G + A LY +M+ G P TY L+D +
Sbjct: 56 ARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDH 115
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
VD G +M G PN YN LV L+ G EA S + M + ++
Sbjct: 116 EVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFG 175
Query: 268 FMMKALSDGGKLDEILEIV 286
++K L G+++ +V
Sbjct: 176 LIIKGLCKEGEIEAAFRVV 194
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M DG C + AI +F++M + PD +++ LID L K + EA +L+ E KG
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKM-VDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+P TY ++D + R+++ T + M + G RP + Y+ L+ L + +D+
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 249 KSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--- 304
+ M + +A +Y ++ AL G+ E ++ + +G EL F
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANG---CPPELITFGLI 177
Query: 305 VKGELSKEGREEEVVKLMEK 324
+KG L KEG E +++++
Sbjct: 178 IKG-LCKEGEIEAAFRVVDE 196
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 151/328 (46%), Gaps = 17/328 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSD-GVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
M +G A+ + YS L+ G + D V L E+ + G D V Y +++ G
Sbjct: 210 MLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRR--GFTPDIVTYSTVIDGLCK 267
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G +A++ + E S +A+ NS++ C G DEA++L +M +++ P
Sbjct: 268 AGRLRDAVDIFEEM-----SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAP-- 320
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ ++ + +C GR DA E+F++M + SPD ++F +L+D LC G + +A
Sbjct: 321 ---DVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDAL 377
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL E++ +G P YTY ++D + N+V G PN YN LV
Sbjct: 378 ELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGC 437
Query: 240 VQVGMLDEAKSFFDIMVKK---LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+ G D+A + D + + A Y ++ AL G+ D+ ++ ++ G +
Sbjct: 438 CRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVP 497
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEK 324
+ V L K + ++ +L+E+
Sbjct: 498 AAATFATVVFA-LCKAHQPQQAHELLEE 524
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 124/291 (42%), Gaps = 49/291 (16%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF D V YS ++ G + G +FEE+ + Y SL+ GY G
Sbjct: 249 RGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS-----CAPTAITYNSLIGGYCRAGDM 303
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA+ + V +N + + + +++ A C G+ D+A +LF +M +L+ +
Sbjct: 304 DEAIRLLGKMVDDNCAPDV--ITYTTLMSAFCKMGRLDDAYELFQQMVA-----NKLSPD 356
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +F + DG CG+GR +DA+E+ ++ C P ++N ++D CK+ + +AEEL
Sbjct: 357 VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVA 416
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVD-------------------------------- 211
+ +G P+ TY +L+ C R D
Sbjct: 417 DFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCR 476
Query: 212 -----DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
D ++ +M+ G P A + +V L + +A + M+K
Sbjct: 477 DGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 527
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 152/366 (41%), Gaps = 60/366 (16%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G DPV + ++ D+ LF+++ E LG V + Y +L+ +
Sbjct: 40 RGLSPDPVELNTILAELCDARDTTTAMALFDKMAE-LGAV--NHTTYYNLIHPLCKARLL 96
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAM + ++ + + +N V+ LC G+ AL ++ +M + H PP L
Sbjct: 97 DEAMGLLLDM--KSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFL--- 150
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD------------------------- 158
++ + G GR +DA++V ++M R PD
Sbjct: 151 --TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVE 208
Query: 159 ----------TLSFNNLIDQLCKNGMLAEAEE-LYGEMSDKGVNPDEYTYGLLMDACFEV 207
++++ L+D LCK L EA L GE++ +G PD TY ++D +
Sbjct: 209 EMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKA 268
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASY 266
R+ D F +M P YN L+G + G +DEA MV D +Y
Sbjct: 269 GRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITY 325
Query: 267 KFMMKALSDGGKLDEILEI----VGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+M A G+LD+ E+ V L + F+ V G L EGR E+ ++L+
Sbjct: 326 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFT----SLVDG-LCGEGRMEDALELL 380
Query: 323 EKKERE 328
E+ R
Sbjct: 381 EEITRR 386
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 42/219 (19%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEEL-KEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D + Y+ LM F + G D + LF+++ KL D V + SL+ G +G E+A+
Sbjct: 321 DVITYTTLMSAFCKMGRLDDAYELFQQMVANKLS---PDVVTFTSLVDGLCGEGRMEDAL 377
Query: 68 E------------------CYNEAVGENSSVKMS---------------AVANNSVLDAL 94
E C + +++ V+ + V N ++
Sbjct: 378 ELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGC 437
Query: 95 CNNGKFDEALKLFDRMKNEHNP-PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
C G+ D+AL+ D++ +E P P +A+ + ++ D C GR DA++ + +M +
Sbjct: 438 CRAGRTDQALQYLDQLNSEGGPCPTSVAM----YAIILDALCRDGRTDDAVQFYEEMIQR 493
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
P +F ++ LCK +A EL EM G P
Sbjct: 494 GYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTP 532
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 154/361 (42%), Gaps = 22/361 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + Y+ LM G R G D +F+E+ K +D + Y SL+ GY
Sbjct: 211 MLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK--DCTADALAYVSLVNGYCKS 268
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA + + G N+++D C G+ DE +F+ M P
Sbjct: 269 SRTKEAQKVVDGIRGTPY-----IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVP--- 320
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N++ DG C G+ +A M C PD +S+N +ID L K EA +
Sbjct: 321 --NIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQ 378
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +M G+ PD TY LM + R DD + M+ +G+ P+ YN L+ L
Sbjct: 379 VLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLS 438
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA--SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
Q L +A M++ + A +Y ++ L G L + L ++ + G+E +
Sbjct: 439 QTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH-MTGHGVEAN 497
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAR-------EAEAAEAAKRSARAAI 351
L KEGR +E L+ + + + E +AE + A + AR +
Sbjct: 498 TVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMV 557
Query: 352 A 352
A
Sbjct: 558 A 558
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 143/316 (45%), Gaps = 14/316 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D Y+ L+ G + +D + E+ ++ GV D V + S+M G G E A
Sbjct: 9 DVFTYNILIDGLCKASKTDKASEMLHEMVDR--GVTPDTVTFNSIMDGLCKAGKFERAHS 66
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
AV + + S N+++ LC D A L D + P ++ +++
Sbjct: 67 LL--AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVP-----DVVTYS 119
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
++ADG C +GR +A E+ ++M C+P+ +++N LID LCK +A EL +
Sbjct: 120 ILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS 179
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G PD TY +++D + R+D M+ G P++ Y L+ L + G +DEA
Sbjct: 180 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 239
Query: 249 KSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
F MV K DA +Y ++ + E ++V GI G + + + G
Sbjct: 240 HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDG 296
Query: 308 ELSKEGREEEVVKLME 323
KEGR +E+ + E
Sbjct: 297 -YCKEGRLDEIPNVFE 311
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 148/356 (41%), Gaps = 43/356 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D V YS L G + G D F L +E+ G + V Y +L+ G E
Sbjct: 110 GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSG--NGCTPNLVTYNTLIDGLCKASKTE 167
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E V +S V ++D LC G+ D+ALK+ + M P +
Sbjct: 168 KAYELLETLV--SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI---- 221
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS----------------------- 161
++ + +G C GR +A +F++M C+ D L+
Sbjct: 222 -TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDG 280
Query: 162 ---------FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
+N L+D CK G L E ++ +M+ +G P+ TY ++MD + +VD+
Sbjct: 281 IRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDE 340
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
+ M +G P++ YN ++ L + EA+ D M++ + D +Y +M
Sbjct: 341 AFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMA 400
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+ D+ + I+ ++ G + + G LS+ R + +LM + R
Sbjct: 401 QFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG-LSQTNRLGDAYELMHEMLR 455
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+++A ++ ++N++ DG C + A E+ +M + +PDT++FN+++D LCK G
Sbjct: 4 RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 63
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A L M+++ P TY L+ + VD T + V SG P++ Y+ L
Sbjct: 64 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILAD 123
Query: 238 KLVQVGMLDEAKSFFDIMVKKLKMDDA-----SYKFMMKALSDGGKLDEILEIVGGILDD 292
L + G +DEA F+ +VK++ + +Y ++ L K ++ E++ ++
Sbjct: 124 GLCKRGRIDEA---FE-LVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS 179
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLME 323
G + V G L KEGR ++ +K++E
Sbjct: 180 GFVPDVVTYTIIVDG-LCKEGRLDKALKMVE 209
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M E + +PD ++N LID LCK +A E+ EM D+GV PD T+ +MD + +
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+ + M + RP+ YN L+ L + +D AK+ D V D +Y
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+ L G++DE E+V + +G + G L K + E+ +L+E
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDG-LCKASKTEKAYELLE 174
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 31/229 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V Y+ L+ G + + L E+ G VVS Y +++ +
Sbjct: 418 MIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRN-GCVVSACTTYNTIIDRLCKE 476
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN-------- 112
G ++A+ + G V+ + V N +D LC G+ DEA L M
Sbjct: 477 GCLKQALLLMDHMTGHG--VEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYT 534
Query: 113 --------------------EHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
E K L + +FN++ D + R +A+ + M +
Sbjct: 535 TVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQ 594
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
CSP +++N +I LCK + +A EL+ EM+ +G+ +Y +L+
Sbjct: 595 RGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLI 643
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 162/325 (49%), Gaps = 10/325 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y+ +MLG R + D +F + EK G+ + Y L+ G F E
Sbjct: 472 RGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK--GLKPNNYTYSILIDGCFRNHDE 529
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A+E N N ++++ V ++++ LC G+ +A +L M E KRL V+
Sbjct: 530 QNALEVVNHMTSSN--IEVNGVVYQTIINGLCKVGQTSKARELLANMIEE----KRLCVS 583
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N + DG+ +G A+ + +M SP+ +++ +L++ LCKN + +A E+
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +KGV D YG L+D + + ++ + F ++++ GL P+ +YN L+ +G
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+ A + M+K L+ D +Y ++ L G L E+ + G+ E +
Sbjct: 704 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTE-MQAVGLVPDEIIY 762
Query: 303 EFVKGELSKEGREEEVVKLMEKKER 327
+ LSK+G+ +VVK+ E+ ++
Sbjct: 763 TVIVNGLSKKGQFVKVVKMFEEMKK 787
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 128/262 (48%), Gaps = 16/262 (6%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ ++ GF ++G+ D +EE+ G+ + + Y SLM G ++A+E +E
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCG--NGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE-HNPPKRLAVNLGSFNVMA 131
+N VK+ A +++D C + A LF + E NP + + +N +
Sbjct: 645 M--KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPI------YNSLI 696
Query: 132 DGYCGQGRFKDAIEVFRKMGE--YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
G+ G A+++++KM + RC D ++ LID L K+G L A ELY EM G
Sbjct: 697 SGFRNLGNMVAALDLYKKMLKDGLRC--DLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ PDE Y ++++ + + F +M + + PN+ +YN ++ + G LDEA
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814
Query: 250 SFFDIMVKK-LKMDDASYKFMM 270
D M+ K + D A++ ++
Sbjct: 815 RLHDEMLDKGILPDGATFDILV 836
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 16/284 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V + L+ G ++ D LF++++++ G + V + L++ +
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKE--GPSPNSVTFSVLIEWFRKN 387
Query: 61 GMEEEAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G E+A+E Y E +G SV ++++ K +EALKLFD
Sbjct: 388 GEMEKALEFYKKMEVLGLTPSV----FHVHTIIQGWLKGQKHEEALKLFDESFETG---- 439
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N+ N + C QG+ +A E+ KM P+ +S+NN++ C+ + A
Sbjct: 440 --LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLA 497
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
++ + +KG+ P+ YTY +L+D CF + + M S + N VY ++
Sbjct: 498 RIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIING 557
Query: 239 LVQVGMLDEAKSFFDIMV--KKLKMDDASYKFMMKALSDGGKLD 280
L +VG +A+ M+ K+L + SY ++ G++D
Sbjct: 558 LCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMD 601
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 11/246 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + Y+ LM G ++ D + +E+K K GV D YG+L+ G+ + E
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK--GVKLDIPAYGALIDGFCKRSNME 671
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A ++E + E + S NS++ N G AL L+ +M + L +L
Sbjct: 672 SASALFSELLEE--GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG-----LRCDL 724
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
G++ + DG G A E++ +M PD + + +++ L K G + +++ E
Sbjct: 725 GTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEE 784
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M V P+ Y ++ + +D+ +M+D G+ P+ A ++ LV QVG
Sbjct: 785 MKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG--QVGN 842
Query: 245 LDEAKS 250
L ++
Sbjct: 843 LQPVRA 848
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 2/174 (1%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
VN +FN + + Y + A+++ +M E P N + L + L EA+EL
Sbjct: 161 VNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKEL 220
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
Y M GV+ D T LLM A + + + ++ G P+ +Y+ V +
Sbjct: 221 YSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCK 280
Query: 242 VGMLDEAKSFFDIMV-KKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
L A S M KKL + +Y ++ A G +D+ + + +L DG
Sbjct: 281 TLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG 334
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 12/249 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGK 99
GV D V LM+ + EA+E + A+ G + ++A + A C
Sbjct: 228 GVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLA----VQACCKTLD 283
Query: 100 FDEALKLFDRMKNEHNPPKRLAV-NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
A L MK K+L V + ++ + QG DAI + +M S +
Sbjct: 284 LAMANSLLREMKE-----KKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMN 338
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
++ +LI CKN L A L+ +M +G +P+ T+ +L++ + ++ +++
Sbjct: 339 VVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYK 398
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGK 278
KM GL P++ + ++ ++ +EA FD + + ++ L GK
Sbjct: 399 KMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGK 458
Query: 279 LDEILEIVG 287
DE E++
Sbjct: 459 TDEATELLS 467
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 140/278 (50%), Gaps = 7/278 (2%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ G RDG D + E+K L GV D + +L+ G+ +
Sbjct: 76 GMAPDVVTYTSVVDGLCRDGKMDRACEMVREMK--LKGVEPDKFTFSALITGWCNARKVD 133
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA++ Y E + SS ++ AV++++++ LC + EA +LF M+ + + ++
Sbjct: 134 EALKLYKEIL--TSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK--PDV 189
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG+C G + A+++ M +C P+ +++++L+ LCK G L +A +L+
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ KG P+ TY L+ ++VD +M + + YN L+ ++G
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309
Query: 245 LDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDE 281
++EAK F M K + D +Y +++ + +L+E
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEE 347
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 12/220 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + D + Y+ L+ GF + L E +K G+ D V Y ++ GY
Sbjct: 320 MAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA-AGIDPDVVTYSIVVAGYSRA 378
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA E E + N V +AV +S++D LC G+ + A+++ +KN P
Sbjct: 379 KRFVEAAEFIQEMIARN--VAPNAVTYSSLIDGLCKAGRVNHAMEV---LKNVDKP---- 429
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ ++ +G CG R ++A+ + +M R P +FN++I LC+ G + EA +
Sbjct: 430 --DVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWK 487
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
L M+ G+ P TY L++ R++ F M
Sbjct: 488 LLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVM 527
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 104/205 (50%), Gaps = 9/205 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N V++ LC +A ++ M++ K +A +L +++ + +G+C QG A E+
Sbjct: 13 NVVVNGLCKARLTSKAYEVLKEMRD----GKSVAPDLVTYSTVINGFCKQGEMDRACEIL 68
Query: 148 RKMGEYR-CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
R+M +PD +++ +++D LC++G + A E+ EM KGV PD++T+ L+
Sbjct: 69 REMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCN 128
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK----LKMD 262
+VD+ +++++ S R + + L+ L + + EA F M + K D
Sbjct: 129 ARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPD 188
Query: 263 DASYKFMMKALSDGGKLDEILEIVG 287
+Y ++ G L++ ++++G
Sbjct: 189 VVTYTALIDGFCKSGNLEKAMKMLG 213
>gi|255661038|gb|ACU25688.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 375
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 140/283 (49%), Gaps = 13/283 (4%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G+ D V ++E + E G D + YG L+ G G +++
Sbjct: 62 FNIMMRGLFDNGEVDQVISIWELMIEN--GFGEDSITYGILVDGLCKNGYANKSLHVLEI 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGSFNVMA 131
A G+ + A + +++++ LC K DEA+ + M KN P N +N +
Sbjct: 120 AEGKGGV--LDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKP------NTHVYNALI 171
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
+G+ G +F+DA VFR+MG + CSP+ +++N LI+ LCK EA +L EM +KG
Sbjct: 172 NGFVGASKFEDATRVFREMGTH-CSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWK 230
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS- 250
P TY LLM +++D + +++ G +P++ ++N L+ L VG A S
Sbjct: 231 PGVSTYSLLMKGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLALSL 290
Query: 251 FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+F++ + +Y +M+ G L L I IL +G
Sbjct: 291 YFNMNXWNCAPNLVTYNTLMEGFYKDGDLRNALAIWAHILRNG 333
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 8/224 (3%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
YNE + EN V AV N++L+ G+ +L++ M ++ + N+ SFN+
Sbjct: 13 YNE-MAENK-VSPDAVVYNAMLNGYFRVGRIKNCFELWELMG------RKGSRNVASFNI 64
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
M G G I ++ M E D++++ L+D LCKNG ++ + KG
Sbjct: 65 MMRGLFDNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEIAEGKG 124
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
D ++Y +++ + ++D+ + MV +G +PN VYN L+ V ++A
Sbjct: 125 GVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKFEDAT 184
Query: 250 SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
F M + +Y ++ L G + E ++V +L+ G
Sbjct: 185 RVFREMGTHCSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKG 228
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 107/261 (40%), Gaps = 45/261 (17%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-----VYGSLMKGYF 58
KG V D YS ++ G ++ D E L G+V +G VY +L+ G+
Sbjct: 123 KGGVLDAFSYSAMINGLCKEAKLD-------EAVSVLSGMVKNGCKPNTHVYNALINGFV 175
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
E+A + E +G + S + V N++++ LC +F EA L M + P
Sbjct: 176 GASKFEDATRVFRE-MGTHCSPNI--VTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPG 232
Query: 119 R-----------------LAVNLGS-------------FNVMADGYCGQGRFKDAIEVFR 148
+A+NL + N++ G C G+ + A+ ++
Sbjct: 233 VSTYSLLMKGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLALSLYF 292
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
M + C+P+ +++N L++ K+G L A ++ + G+ PD +Y + + N
Sbjct: 293 NMNXWNCAPNLVTYNTLMEGFYKDGDLRNALAIWAHILRNGLQPDIISYNITLKGLCSCN 352
Query: 209 RVDDGATYFRKMVDSGLRPNL 229
R+ + V L P +
Sbjct: 353 RISGAILFLHDAVTKKLVPTI 373
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V+ +M E + SPD + +N +++ + G + EL+ M KG + +
Sbjct: 1 CESGDXDGAERVYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKG-SRNV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ VD + + M+++G + Y LV L + G +++ +I
Sbjct: 60 ASFNIMMRGLFDNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEI 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
K + DA SY M+ L KLDE + ++ G++ +G
Sbjct: 120 AEGKGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNG 159
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G AE +Y EM++ V+PD Y +++ F V R+ + + M G R N+
Sbjct: 1 CESGDXDGAERVYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKGSR-NV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV-- 286
A +N ++ L G +D+ S +++M++ D +Y ++ L G ++ L ++
Sbjct: 60 ASFNIMMRGLFDNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEI 119
Query: 287 ----GGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
GG+LD FS + G L KE + +E V ++
Sbjct: 120 AEGKGGVLD----AFS--YSAMING-LCKEAKLDEAVSVLS 153
>gi|255661034|gb|ACU25686.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 376
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 141/284 (49%), Gaps = 10/284 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ ++ +M G +G+ D ++E +K+ G V D + L+ G+ G +++
Sbjct: 60 ISFNIMMRGLFNNGEVDKAISIWELMKKS--GFVEDSTTHAILIDGFCKNGYINKSLRVL 117
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ E ++A A +++++ LC K D+A + + M + P N +N++
Sbjct: 118 E--IAEEKGGVLNAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKP-----NAHVYNIL 170
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ G +F DAI VF++MG CSP +++N LI+ LCK AEA +L EM +KG
Sbjct: 171 INGFVGASKFYDAIRVFQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGW 230
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-K 249
P TY LL+ + ++V+ + +++ GL+P++ ++N L+ L VG A
Sbjct: 231 KPCVITYSLLIKGLCQGHKVEMAIQLWNQVISKGLKPDVQMHNILIHGLCSVGKTQLALM 290
Query: 250 SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+FD+ + ++ +M+ G + L I IL +G
Sbjct: 291 LYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 125/270 (46%), Gaps = 11/270 (4%)
Query: 25 DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSA 84
D DG R+++E+ E + D VVY +++ GYF G ++ E + E +G +
Sbjct: 5 DIDGAERVYKEMVES--KMSPDAVVYNAMLNGYFRVGRIKDCFELW-ELMGTEGG--QNV 59
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
++ N ++ L NNG+ D+A+ +++ MK + + ++ DG+C G ++
Sbjct: 60 ISFNIMMRGLFNNGEVDKAISIWELMKKSG-----FVEDSTTHAILIDGFCKNGYINKSL 114
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
V E + +++ +I+ LC+ L +A + M G P+ + Y +L++
Sbjct: 115 RVLEIAEEKGGVLNAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNILINGF 174
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
++ D F++M + P + YN L+ L + EA M++K K
Sbjct: 175 VGASKFYDAIRVFQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCV 234
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y ++K L G K++ +++ ++ G
Sbjct: 235 ITYSLLIKGLCQGHKVEMAIQLWNQVISKG 264
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 125/283 (44%), Gaps = 44/283 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D ++ L+ GF ++G + R+ E +EK GGV+ + Y +++ G + +
Sbjct: 89 GFVEDSTTHAILIDGFCKNGYINKSLRVLEIAEEK-GGVL-NAFAYSAMINGLCREAKLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A N + S K +A N +++ KF +A+++F M + P +
Sbjct: 147 KAASVLNGMIKNGS--KPNAHVYNILINGFVGASKFYDAIRVFQEMGSTDCSP-----TI 199
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C RF +A ++ ++M E P ++++ LI LC+ + A +L+ +
Sbjct: 200 VTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLIKGLCQGHKVEMAIQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDA-C------------FEVNR---------------------- 209
+ KG+ PD + +L+ C F++NR
Sbjct: 260 VISKGLKPDVQMHNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGD 319
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+ + + +++ +GL+P++ YN + L + A F
Sbjct: 320 IRNALVIWARILRNGLQPDIVSYNITLKGLCSCNRISFANLFL 362
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 95/216 (43%), Gaps = 9/216 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY+ L+ GFV R+F+E+ V Y +L+ G EA +
Sbjct: 166 VYNILINGFVGASKFYDAIRVFQEMGST--DCSPTIVTYNTLINGLCKGERFAEAYDLVK 223
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E + K + + ++ LC K + A++L++++ + K L ++ N++
Sbjct: 224 EML--EKGWKPCVITYSLLIKGLCQGHKVEMAIQLWNQVIS-----KGLKPDVQMHNILI 276
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G C G+ + A+ ++ M + C+P+ ++ N L++ K+G + A ++ + G+
Sbjct: 277 HGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQ 336
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
PD +Y + + NR+ + + + + P
Sbjct: 337 PDIVSYNITLKGLCSCNRISFANLFLXDALANAIAP 372
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 81/186 (43%), Gaps = 9/186 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G + + L +E+ EK G + Y L+KG E A++ +
Sbjct: 200 VTYNTLINGLCKGERFAEAYDLVKEMLEK--GWKPCVITYSLLIKGLCQGHKVEMAIQLW 257
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
N+ + + +K +N ++ LC+ GK AL L+ M + P NL + N +
Sbjct: 258 NQVISK--GLKPDVQMHNILIHGLCSVGKTQLALMLYFDMNRWNCAP-----NLVTHNTL 310
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ G ++A+ ++ ++ PD +S+N + LC ++ A + +
Sbjct: 311 MEGFYKDGDIRNALVIWARILRNGLQPDIVSYNITLKGLCSCNRISFANLFLXDALANAI 370
Query: 191 NPDEYT 196
P T
Sbjct: 371 APTXIT 376
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D +++MV+S + P+ VYN ++ +VG + + +++M + + S+ M
Sbjct: 6 IDGAERVYKEMVESKMSPDAVVYNAMLNGYFRVGRIKDCFELWELMGTEGGQNVISFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
M+ L + G++D+ + I + G +E S + G K G + ++++E E
Sbjct: 66 MRGLFNNGEVDKAISIWELMKKSGFVEDSTTHAILIDG-FCKNGYINKSLRVLEIAE 121
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 21/297 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G A+ V ++ LM G R+G L + + E+ G D V YG+++ G
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEE--GHQPDAVTYGTIVNGMCKL 58
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A+ + + S +K + V ++++D LC +G +A +F M + P
Sbjct: 59 GDTVSALNMLRKM--DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFP--- 113
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N M DGYC G++ DA ++ R M E PD ++F+ LI+ K G ++ AEE
Sbjct: 114 --NVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEE 171
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN------- 233
LY EM + + P TY ++D + +R++D F MV G P++ N
Sbjct: 172 LYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCC 231
Query: 234 ----RLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
L+ QVG ++ A+ F M+ + D + ++ L + GKL++ LE+
Sbjct: 232 RAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEM 288
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 142/296 (47%), Gaps = 22/296 (7%)
Query: 15 YLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAV 74
+L+ GF + G+ + LF+E+ GV D V +L+ G G E+A+E + V
Sbjct: 236 HLIHGFCQVGNVNVAQDLFQEMISN--GVSPDIVTCNTLLAGLCENGKLEKALEMFK--V 291
Query: 75 GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGY 134
+ S + + N +++ +C K DEA LF+ + P + ++ ++N++ +
Sbjct: 292 FQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSL-----PVNGVETDVVTYNILIGVF 346
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
+G F A +++ +M P T+++N+++D CK L EA ++ M +G +PD
Sbjct: 347 VKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDV 406
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
T+ L+ + RVDDG F +M GL + YN L+ +VG L+ A+ F+
Sbjct: 407 VTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEE 466
Query: 255 MVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
MV + D +++ M+ L +L + G+ E+LQ+ V EL
Sbjct: 467 MVSSGVCPDTITFRSMLAGLCTKAELQK------------GLTMLEDLQKSVDHEL 510
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G VAD + Y+ L+ GF + GD +G +FEE+ GV D + + S++ G K
Sbjct: 432 MCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSS--GVCPDTITFRSMLAGLCTK 489
Query: 61 G 61
Sbjct: 490 A 490
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 137/275 (49%), Gaps = 14/275 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ GF G + E++E+ GG+ D Y +L+ G+ G E+A + +
Sbjct: 148 VTYNTVIAGFCARGRVQAALEVMREMRER-GGIAPDKYTYATLISGWCKIGRMEDAAKVF 206
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+E + + V SAV N+++ C+ GK D AL+ + M + +A+ + ++N++
Sbjct: 207 DEMLTQGE-VAPSAVMYNALIGGYCDRGKLDVALQYREDMVQ-----RGVAMTVATYNLL 260
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
GR DA V +M SPD ++N LI+ CK G +A E++ EMS KGV
Sbjct: 261 VHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGV 320
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
TY L+ A +V + F+ V G+RP++ +YN L+ G ++ A
Sbjct: 321 RATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERA-- 378
Query: 251 FFDIMV----KKLKMDDASYKFMMKALSDGGKLDE 281
F+IM K++ DD +Y +++ G+LDE
Sbjct: 379 -FEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDE 412
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 111/219 (50%), Gaps = 8/219 (3%)
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
RL + +FN+M C G+ A+E+ R+M P+ +++N +I C G + A
Sbjct: 111 RLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAA 166
Query: 179 EELYGEMSDK-GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG-LRPNLAVYNRLV 236
E+ EM ++ G+ PD+YTY L+ ++ R++D A F +M+ G + P+ +YN L+
Sbjct: 167 LEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALI 226
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
G G LD A + + MV++ + M A+Y ++ AL G+ + ++ + +G
Sbjct: 227 GGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLS 286
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKA 334
+ G KEG E++ +++ E+ R+ A A
Sbjct: 287 PDVFTYNILING-YCKEGNEKKALEVFEEMSRKGVRATA 324
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 17/242 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G Y+ L+ DG + + + EE++ G+ D Y L+ GY +
Sbjct: 245 MVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRN--GLSPDVFTYNILINGYCKE 302
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E++A+E + E V+ +AV S++ A G+ E +LF + P
Sbjct: 303 GNEKKALEVFEEM--SRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRP--- 357
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +N + + +C G + A E+ +M + R PD +++N LI C G L EA
Sbjct: 358 --DVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARG 415
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM+ +G+ PD GL + + DD ++MV G+ P+ + Y L+ L
Sbjct: 416 LIDEMTKRGIQPD---LGLCKN-----GQGDDAENLMKEMVGKGITPDDSTYISLIEGLT 467
Query: 241 QV 242
V
Sbjct: 468 TV 469
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 12/209 (5%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ + N +L LC GK AL+L +M P+ AV ++N + G+C +GR
Sbjct: 112 LPLCTTTFNIMLRHLCATGKPVRALELLRQM------PRPNAV---TYNTVIAGFCARGR 162
Query: 140 FKDAIEVFRKMGEY-RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VNPDEYTY 197
+ A+EV R+M E +PD ++ LI CK G + +A +++ EM +G V P Y
Sbjct: 163 VQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMY 222
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
L+ + ++D Y MV G+ +A YN LV L G +A + + M +
Sbjct: 223 NALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQR 282
Query: 258 K-LKMDDASYKFMMKALSDGGKLDEILEI 285
L D +Y ++ G + LE+
Sbjct: 283 NGLSPDVFTYNILINGYCKEGNEKKALEV 311
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 121 bits (303), Expect = 7e-25, Method: Composition-based stats.
Identities = 95/340 (27%), Positives = 153/340 (45%), Gaps = 29/340 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VK V +S L+ GF G FRLF E+ K + D + L+ +
Sbjct: 219 MIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMK--NINPDAYTFNILVDALCKE 276
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALC---NNGKFDEALKLFDRMKNEHNPP 117
G +EA AV V+ + V N+++D C GK L + RM
Sbjct: 277 GKIKEAKNVI--AVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRM------- 327
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
R+A N S+N+M +G+C +A+ +F +M +P +++N+LID LCK G +
Sbjct: 328 -RVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPY 386
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A EL EM + + D TY L+D + VD +K+ + G++PN+ YN L+
Sbjct: 387 AWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILID 446
Query: 238 KLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
L + G L A+ F D+++K ++ +Y M+ L G DE ++ + D+G I
Sbjct: 447 GLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIP 506
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKARE 336
+ + ++ L K E EKA+ RE
Sbjct: 507 DAVTYETIIQA-------------LFHKDENEKAQKLLRE 533
Score = 100 bits (249), Expect = 1e-18, Method: Composition-based stats.
Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 10/233 (4%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ ++ GF + D LF E+ + G+ V Y SL+ G G A E +E
Sbjct: 336 YNIMINGFCKIKMVDEALCLFHEMCCR--GIAPHKVTYNSLIDGLCKAGRIPYAWELVDE 393
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
N+ + V NS++D C N D+A+ L ++K P N+ ++N++ D
Sbjct: 394 M--HNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQP-----NMCTYNILID 446
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G C G+ K+A +VF+ + + + ++N +I+ LCK G+ EAE L +M D G+ P
Sbjct: 447 GLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIP 506
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP-NLAVYNRLVGKLVQVGM 244
D TY ++ A F + + R+MV G+ + LVG+ + +GM
Sbjct: 507 DAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLVGRTLNLGM 559
Score = 92.8 bits (229), Expect = 3e-16, Method: Composition-based stats.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 15/261 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G V Y+ LM G+ G + V + ++ V + Y ++ G+
Sbjct: 289 MMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR-----VAPNSRSYNIMINGF 343
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
M +EA+ ++E + V NS++D LC G+ A +L D M N P
Sbjct: 344 CKIKMVDEALCLFHEMCCR--GIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIP- 400
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
++ ++N + D +C AI + +K+ E+ P+ ++N LID LCK G L
Sbjct: 401 ----ADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKN 456
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A++++ ++ KG N + +TY ++++ + D+ KM D+G+ P+ Y ++
Sbjct: 457 AQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQ 516
Query: 238 KLVQVGMLDEAKSFFDIMVKK 258
L ++A+ MV K
Sbjct: 517 ALFHKDENEKAQKLLREMVIK 537
Score = 80.9 bits (198), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 110/237 (46%), Gaps = 9/237 (3%)
Query: 49 VYGSLMK-GYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
V+ ++K G + G EA+ ++ + ++ V +++ LC G+ AL++
Sbjct: 124 VFAKILKMGLCLNGKVNEALLFHDHVLA--LGFHLNHVTYGILINGLCKMGQTRAALQVL 181
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
+++ K + N+ ++ + DG C DA ++ +M R P ++F++LI
Sbjct: 182 RQIEG-----KLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIY 236
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
C G +A L+ EM K +NPD YT+ +L+DA + ++ + M+ G+ P
Sbjct: 237 GFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEP 296
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEIL 283
+ YN L+ V + +AK I+ + ++ + SY M+ +DE L
Sbjct: 297 TVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEAL 353
Score = 40.8 bits (94), Expect = 1.3, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 16/147 (10%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN-GMLAEAEELYGEMSDKGVNPDEYTYGLL 200
+A+ F +M + R +P + FN ++ L K L +M KGV PD +T +L
Sbjct: 49 NAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSIL 108
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKL 259
++ + ++ + F K++ GL N G ++EA F D ++
Sbjct: 109 INCYCHLGQMTFAFSVFAKILKMGLCLN--------------GKVNEALLFHDHVLALGF 154
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIV 286
++ +Y ++ L G+ L+++
Sbjct: 155 HLNHVTYGILINGLCKMGQTRAALQVL 181
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 143/283 (50%), Gaps = 15/283 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVV-YGSLMKGYFM 59
M +KGF + + Y YLM G + D E + L V VV + +L+ G+
Sbjct: 306 MILKGFTPNDMTYGYLMHGLCKTCRID-------EAQALLSKVPGPNVVHFNTLVNGFVR 358
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G EA + + N V +++++ LC G F AL+L + M + P
Sbjct: 359 NGRLNEATAFVYDKMINNGYVP-DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKP-- 415
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
NL ++ ++ DG+C +G+ ++A + R+M S +T+ +N LI LCK+G + EA
Sbjct: 416 ---NLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEAL 472
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+++GEMS KG PD +T+ L+ V+ ++D +R MV G+ N +N L+
Sbjct: 473 DMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAF 532
Query: 240 VQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
++ G + EA K D++ + +D+ +Y ++KAL G +++
Sbjct: 533 LRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEK 575
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 117/233 (50%), Gaps = 9/233 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D ++ L+ G R + + L+ ++ L GV+++ V + +L+ + +G
Sbjct: 481 KGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMV--LEGVIANSVTFNTLIHAFLRRGEI 538
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA++ N+ + + + N ++ ALC G ++ L LF+ M K L +
Sbjct: 539 QEALKLVNDMLFRGCP--LDEITYNGLIKALCKTGAVEKGLGLFEEMIR-----KGLTPS 591
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + N++ +G+C G+ +A+E R M SPD +++N+LI+ LCK G + EA L+
Sbjct: 592 IITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFE 651
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++ +G+ PD TY L+ DD + V++G PN +N LV
Sbjct: 652 KLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 137/317 (43%), Gaps = 45/317 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G+V D +S L+ G + G L ++ K G + Y L+ G+ K
Sbjct: 373 MINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAK--GCKPNLNTYTILIDGFCKK 430
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA E + + S ++ V N+++ ALC +GK EAL +F M ++ P
Sbjct: 431 GQLEEAGLILREMLTKGFS--LNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKP--- 485
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKM----------------------GEYR---- 154
++ +FN + G C +DA+ ++R M GE +
Sbjct: 486 --DIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALK 543
Query: 155 ---------CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
C D +++N LI LCK G + + L+ EM KG+ P T +L++
Sbjct: 544 LVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFC 603
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDA 264
+V + + R M+ G P++ YN L+ L + G + EA + F+ + + ++ D
Sbjct: 604 TAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSI 663
Query: 265 SYKFMMKALSDGGKLDE 281
+Y ++ L G D+
Sbjct: 664 TYNTLICWLCREGAFDD 680
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 9/248 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF + V Y+ L+ + G +F E+ K G D + SL+ G
Sbjct: 443 MLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSK--GCKPDIFTFNSLIFGLCRV 500
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E+A+ Y + V E V ++V N+++ A G+ EALKL + M P +
Sbjct: 501 DEMEDALALYRDMVLE--GVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEI 558
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + C G + + +F +M +P ++ N LI+ C G + A E
Sbjct: 559 -----TYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALE 613
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+M +G +PD TY L++ + R+ + F K+ G++P+ YN L+ L
Sbjct: 614 FMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLC 673
Query: 241 QVGMLDEA 248
+ G D+A
Sbjct: 674 REGAFDDA 681
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 12/230 (5%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
V+ ALC + D A L M P + + + D + R +A+++ +
Sbjct: 216 VMKALCMVNEVDNACLLLRDMTKHGCVPNSMI-----YQTLIDALSKRDRVDEALKLLEE 270
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M C PD +FN +I C+ + E +L M KG P++ TYG LM + R
Sbjct: 271 MFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCR 330
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF-FDIMVKKLKMDDA-SYK 267
+D+ K+ PN+ +N LV V+ G L+EA +F +D M+ + D ++
Sbjct: 331 IDEAQALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFS 386
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
++ L G LE+V +D G + + + K+G+ EE
Sbjct: 387 TLVNGLCKKGLFGSALELVND-MDAKGCKPNLNTYTILIDGFCKKGQLEE 435
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 36/192 (18%)
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
G Y C P S+N ++D L + A ++ +M KGV+P++YT+GL+M A VN V
Sbjct: 167 GVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEV 226
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD----------------- 253
D+ R M G PN +Y L+ L + +DEA +
Sbjct: 227 DNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTV 286
Query: 254 -------------------IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+++K +D +Y ++M L ++DE ++ +
Sbjct: 287 IYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNV 346
Query: 295 IEFSEELQEFVK 306
+ F+ + FV+
Sbjct: 347 VHFNTLVNGFVR 358
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 8/222 (3%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
RL ++KE+ G+V ++ +MK Y G+ +A + G + S + N V
Sbjct: 125 RLLLQMKEE--GIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGV-YCCEPSFRSYNVV 181
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
LD L A +F M ++ P N +F ++ C +A + R M
Sbjct: 182 LDVLVVGNCPSVASNVFYDMLSKGVSP-----NDYTFGLVMKALCMVNEVDNACLLLRDM 236
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
++ C P+++ + LID L K + EA +L EM G PD T+ ++ +NRV
Sbjct: 237 TKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRV 296
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+GA +M+ G PN Y L+ L + +DEA++
Sbjct: 297 LEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL 338
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + + L+ GF G ++ + G D V Y SL+ G +
Sbjct: 583 MIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHR--GFSPDIVTYNSLINGLCKR 640
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + + E ++ ++ N+++ LC G FD+A L R P +
Sbjct: 641 GRIQEALNLFEKLQAE--GIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDV 698
Query: 121 AVNLGSFN 128
N+ +N
Sbjct: 699 TWNILVYN 706
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 166/338 (49%), Gaps = 29/338 (8%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGFV D Y+ ++ GD + L E+ + +V D ++ G +G+
Sbjct: 376 KGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN--NLVLDSTTQTIMICGLCKRGLV 433
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAM+ ++E +GE+ + + N+++D G+ +EA LF +M+ +NP L +
Sbjct: 434 DEAMQIFDE-MGEHGC-DPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLT 491
Query: 124 LGSFNV--------MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
LG+ V + C G+ A ++ R + + PD +++N LI+ LCK L
Sbjct: 492 LGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNL 551
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
A L+ E+ KG++PDE TYG L+D +R +D F+ ++ SG P+L++YN +
Sbjct: 552 DGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSM 611
Query: 236 VGKLVQVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKA--LSDGGKLDEILEIVGGILDD 292
+ L ++ L +A + + D + KK Y F +++ L++ K EI G LDD
Sbjct: 612 MRSLCRMKKLSQAINLWLDYLPKK-------YNFPVESEVLANAHK-----EIEDGSLDD 659
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKA 330
G E + QE+ G +S ++ L + + + A
Sbjct: 660 GVRELIKIDQEY--GYISSNPYTIWLIGLCQVRRTDDA 695
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 139/304 (45%), Gaps = 14/304 (4%)
Query: 22 RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVK 81
R+ D+ F +E + + VY +++K G+ A+ YN V +
Sbjct: 152 RNADAVQAFSRMDEFQSR-----PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPN 206
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
+ N ++D LC G +ALK+FD M + P N+ + V+ C G+
Sbjct: 207 RATY--NVLMDGLCKQGMAGDALKMFDEMLDRGIMP-----NVKIYTVLLSSLCNAGKID 259
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
+A+++ M + C PD +++N + LCK G + EA + + D G Y L+
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LK 260
D F+ R D+G Y++ M++ + P++ +Y ++ + G +++A SF D+M KK
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV 379
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
D Y ++K L D G L+ + +L + + Q + L K G +E ++
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN-NLVLDSTTQTIMICGLCKRGLVDEAMQ 438
Query: 321 LMEK 324
+ ++
Sbjct: 439 IFDE 442
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 9/255 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + +Y+ L+ G D +L +K+K G + D V Y + + G
Sbjct: 233 MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDK--GCLPDEVTYNAFLSGLCKV 290
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + + ++ + + ++D L +FDE + M + P
Sbjct: 291 GRVNEAFQ--RLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP--- 345
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + +M G GR +DA+ M + PDT +N ++ LC +G L A
Sbjct: 346 --DVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHT 403
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM + D T +++ + VD+ F +M + G P + YN L+
Sbjct: 404 LRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFY 463
Query: 241 QVGMLDEAKSFFDIM 255
+ G L+EA+ F M
Sbjct: 464 REGRLEEARMLFHKM 478
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 153/355 (43%), Gaps = 48/355 (13%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG +Y L+ G+ +G + + + GV D ++ + Y K M
Sbjct: 301 KGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVR--NGVSPDHHIFNIMFNAYAKKAMI 358
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------ 117
+EAM +++ + V +++DALC G+ D+A+ F++M NE P
Sbjct: 359 DEAMHIFDKM--RQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFS 416
Query: 118 ------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
+ + +N FN++ C +GR +A + M
Sbjct: 417 SLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRV 476
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
PD +S+N L+D C G + EA +L M G+ PDE+TY L+ + R+DD
Sbjct: 477 DVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDA 536
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKA 272
+ FR+M+ GL P + YN ++ L Q+G EAK + M+ + K D +Y ++
Sbjct: 537 YSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNG 596
Query: 273 LSDGGKLDEILEIVGGILDDGGIEFSEELQ------EFVKGELSKEGREEEVVKL 321
L +DE ++ + S++LQ + G L K GR+E+ + L
Sbjct: 597 LCRNNFVDEAFKMFQSLC-------SKDLQLDIFTINIMIGALLKGGRKEDAMDL 644
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 134/281 (47%), Gaps = 10/281 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ G + D +F+ + +K GV + Y L+ GY G +E ++
Sbjct: 203 VTYTTVIDGLCKAQMVDRAKGVFQHMIDK--GVRPNNHTYTCLIHGYLSTGKWKEVVQML 260
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E ++ V +LD LC NG+ EA +FD + + P ++ + ++
Sbjct: 261 QEM--STHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKP-----HVTIYGIL 313
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
GY +G + M SPD FN + + K M+ EA ++ +M + +
Sbjct: 314 LHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWL 373
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-K 249
+P YG L+DA ++ RVDD F +M++ G+ P++ V++ LV L V ++A K
Sbjct: 374 SPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEK 433
Query: 250 SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
FF+++ + ++++ A + +M L G++ E ++ +L
Sbjct: 434 LFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLML 474
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 158/360 (43%), Gaps = 10/360 (2%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V+S L+ G + +LF E+ ++ G+ + + LM +
Sbjct: 403 MINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQ--GIRLNAAFFNILMCNLCRE 460
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + + V+ ++ N+++D C G+ DEA KL D M + P
Sbjct: 461 GRVMEAQRLIDLML--RVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEF 518
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + GYC R DA +FR+M +P +++N ++ L + G EA+E
Sbjct: 519 -----TYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKE 573
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY M + D YTY ++++ N VD+ F+ + L+ ++ N ++G L+
Sbjct: 574 LYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALL 633
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G ++A F I L D +Y+ + + L G L+E+ E+ + ++G S
Sbjct: 634 KGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSR 693
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLIPSKF 359
L V+ L + V L + E+ + + + R+ +A +P K+
Sbjct: 694 MLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAKSLPEKY 753
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 122/254 (48%), Gaps = 7/254 (2%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGE-NSSVKMSAVANNSVLDALCNNGKF 100
G + + Y L+KG + EEA+E + + + S + V +V+D LC
Sbjct: 159 GCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMV 218
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
D A +F M ++ P N ++ + GY G++K+ +++ ++M + PD +
Sbjct: 219 DRAKGVFQHMIDKGVRP-----NNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCV 273
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+ L+D LCKNG EA ++ + KG+ P YG+L+ + + ++ M
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLM 333
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
V +G+ P+ ++N + + M+DEA FD M ++ L +Y ++ AL G++
Sbjct: 334 VRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRV 393
Query: 280 DEILEIVGGILDDG 293
D+ + ++++G
Sbjct: 394 DDAVLKFNQMINEG 407
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 10/236 (4%)
Query: 64 EEAMECYNEAVGENS-SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
E + +N + E S V S+ ++ C G+ F + +
Sbjct: 71 ELVVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVI 130
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
F + G C R +A ++ R+M E+ C+ + +S+N L+ LC EA EL
Sbjct: 131 ----FGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALEL 186
Query: 182 YGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
M+D G P+ TY ++D + VD F+ M+D G+RPN Y L+
Sbjct: 187 MHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHG 246
Query: 239 LVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G E M L+ D Y ++ L G+ E I ++ G
Sbjct: 247 YLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKG 302
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 166/338 (49%), Gaps = 29/338 (8%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGFV D Y+ ++ GD + L E+ + +V D ++ G +G+
Sbjct: 376 KGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN--NLVLDSTTQTIMICGLCKRGLV 433
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAM+ ++E +GE+ + + N+++D G+ +EA LF +M+ +NP L +
Sbjct: 434 DEAMQIFDE-MGEHGC-DPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLT 491
Query: 124 LGSFNV--------MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
LG+ V + C G+ A ++ R + + PD +++N LI+ LCK L
Sbjct: 492 LGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNL 551
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
A L+ E+ KG++PDE TYG L+D +R +D F+ ++ SG P+L++YN +
Sbjct: 552 DGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSM 611
Query: 236 VGKLVQVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKA--LSDGGKLDEILEIVGGILDD 292
+ L ++ L +A + + D + KK Y F +++ L++ K EI G LDD
Sbjct: 612 MRSLCRMKKLSQAINLWLDYLPKK-------YNFPVESEVLANAHK-----EIEDGSLDD 659
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKA 330
G E + QE+ G +S ++ L + + + A
Sbjct: 660 GVRELIKIDQEY--GYISSNPYTIWLIGLCQVRRTDDA 695
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 14/304 (4%)
Query: 22 RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVK 81
R D+ F +E + + VY +++K G+ A+ YN V +
Sbjct: 152 RHADAVQAFSRMDEFQSR-----PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPN 206
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
+ N ++D LC G +ALK+FD M + P N+ + V+ C G+
Sbjct: 207 RATY--NVLMDGLCKQGMAGDALKMFDEMLDRGIMP-----NVKIYTVLLSSLCNAGKID 259
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
+A+++ M + C PD +++N + LCK G + EA + + D G Y L+
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LK 260
D F+ R D+G Y++ M++ + P++ +Y ++ + G +++A SF D+M KK
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV 379
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
D Y ++K L D G L+ + +L + + Q + L K G +E ++
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQN-NLVLDSTTQTIMICGLCKRGLVDEAMQ 438
Query: 321 LMEK 324
+ ++
Sbjct: 439 IFDE 442
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 9/255 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + +Y+ L+ G D +L +K+K G + D V Y + + G
Sbjct: 233 MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDK--GCLPDEVTYNAFLSGLCKV 290
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + + ++ + + ++D L +FDE + M + P
Sbjct: 291 GRVNEAFQ--RLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP--- 345
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + +M G GR +DA+ M + PDT +N ++ LC +G L A
Sbjct: 346 --DVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHT 403
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM + D T +++ + VD+ F +M + G P + YN L+
Sbjct: 404 LRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFY 463
Query: 241 QVGMLDEAKSFFDIM 255
+ G L+EA+ F M
Sbjct: 464 REGRLEEARMLFHKM 478
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 143/290 (49%), Gaps = 10/290 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF + V ++ L+ GF +G +L K G D YGSL+ G G
Sbjct: 120 GFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAK--GYPLDEFSYGSLINGLCKNGQTR 177
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A++ + E V+ + + ++V+D LC + +AL+LF + + + + V++
Sbjct: 178 DALQLLQKM--EEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTS-----RGILVDV 230
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C G++++A + M +PD +FN L+D LCK G + EA+ ++
Sbjct: 231 VAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAV 290
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +G PD TY LM+ N V + F +MV GL P++ YN L+ ++ M
Sbjct: 291 MMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDM 350
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+DEA F +I K L + A+Y ++ L G++ + E+V + D G
Sbjct: 351 VDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRG 400
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 156/321 (48%), Gaps = 17/321 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ KG+ D Y L+ G ++G + +L ++++E L V + + Y +++ G
Sbjct: 151 LMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDL--VRPNLITYSTVIDGLCKD 208
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
+ +A+ + ++ + + + VA NS++ C+ G++ EA +L M + NP
Sbjct: 209 RLIADALRLF--SLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDY 266
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+FN++ D C +GR +A VF M + PD +++N L++ C + ++EA
Sbjct: 267 ------TFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEAR 320
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ M +G+ PD Y +L++ +++ VD+ F+++ L PNLA YN L+ L
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGL 380
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEIL----EIVGGILDDGG 294
++G + + D M + + D +Y + A ++ + +IV GI D
Sbjct: 381 CKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFY 440
Query: 295 IEFSEELQEFVKGELSKEGRE 315
+ + ++ F KGE K E
Sbjct: 441 M-YDVIVENFCKGEKLKIAEE 460
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 141/333 (42%), Gaps = 10/333 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ YS ++ G +D RLF + + G++ D V Y SL+ G G EA
Sbjct: 196 ITYSTVIDGLCKDRLIADALRLFSLVTSR--GILVDVVAYNSLIHGCCSVGQWREATRLL 253
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
V N + N ++DALC G+ EA +F M P ++ ++N +
Sbjct: 254 TMMVRGN--INPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKP-----DIVTYNAL 306
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+C +A E+F +M + PD L++N LI+ CK M+ EA L+ E+ K +
Sbjct: 307 MEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNL 366
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ TY L+D ++ R+ +M D G P++ YN + + ++A S
Sbjct: 367 VPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAIS 426
Query: 251 FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELS 310
F +V+ + D Y +++ G KL E + +L G + L
Sbjct: 427 LFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINA-LC 485
Query: 311 KEGREEEVVKLMEKKEREKAEAKAREAEAAEAA 343
K+ +E + L+ K + A E A
Sbjct: 486 KDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGA 518
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 115/249 (46%), Gaps = 10/249 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ LM GF + LF + ++ G+ D + Y L+ GY
Sbjct: 291 MMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKR--GLEPDVLNYNVLINGYCKI 348
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M +EAM + E +N ++ NS++D LC G+ +L D M + P
Sbjct: 349 DMVDEAMVLFKEIRCKNLVPNLATY--NSLIDGLCKLGRMSCVQELVDEMCDRGQSP--- 403
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N+ D +C ++ AI +FR++ + PD ++ +++ CK L AEE
Sbjct: 404 --DIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEE 460
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ G P+ TY ++++A + D+ T KM D+ P+ + ++G L
Sbjct: 461 ALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQ 520
Query: 241 QVGMLDEAK 249
+ D+A+
Sbjct: 521 ERNETDKAE 529
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 109/231 (47%), Gaps = 7/231 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+ +L A+ G + A+ LF ++ + K + ++ + ++ + YC Q A +
Sbjct: 59 DKLLGAIVRMGHYPTAISLFSQLHS-----KGITPSIATLTILINCYCHQAHLSFAFSLL 113
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ + P+ ++FN LI+ C NGM+++A ++ KG DE++YG L++ +
Sbjct: 114 GTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKN 173
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+ D +KM + +RPNL Y+ ++ L + ++ +A F ++ + + +D +Y
Sbjct: 174 GQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAY 233
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
++ G+ E ++ ++ G I + + L KEGR E
Sbjct: 234 NSLIHGCCSVGQWREATRLL-TMMVRGNINPDDYTFNILVDALCKEGRIVE 283
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 14/227 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D + Y+ L+ G+ + D LF+E++ K +V + Y SL+ G
Sbjct: 326 MVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCK--NLVPNLATYNSLIDGLCKL 383
Query: 61 GMEEEAMECYNEAVGENSSVKMSA--VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G M C E V E S V N LDA C + +++A+ LF ++ P
Sbjct: 384 G----RMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWP-- 437
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ ++V+ + +C + K A E + + + C P+ ++ +I+ LCK+ EA
Sbjct: 438 ----DFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEA 493
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
L +M D PD T+ ++ A E N D +M++ GL
Sbjct: 494 MTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 77/174 (44%), Gaps = 4/174 (2%)
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFK---DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
P+ + + S +V G+ +F D + F +M P F+ L+ + + G
Sbjct: 10 PRSIHILFFSQHVRFFGHLHPPKFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMG 69
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
A L+ ++ KG+ P T +L++ + + ++ G +PN+ +N
Sbjct: 70 HYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFN 129
Query: 234 RLVGKLVQVGMLDEAKSF-FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
L+ GM+ +A +F D+M K +D+ SY ++ L G+ + L+++
Sbjct: 130 TLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLL 183
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 147/295 (49%), Gaps = 18/295 (6%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGVVS--DGVVYGSLMKGYFM 59
G V D YS L+ + G +D + R+ E GG V D V Y +++ G+F
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE-----GGAVCSPDVVAYSTVIDGFFK 231
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+G +A + + E V + V +SV+ ALC D+A +M N+ P
Sbjct: 232 EGDVNKACDLFKEMV--QRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP-- 287
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N ++N + GY G++K+A+ VF++M + PD ++ + L+ LCK G + EA
Sbjct: 288 ---NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+++ M+ KG NP+ ++Y ++++ + D F M+ G+ P++ +N L+
Sbjct: 345 DVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 404
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
GMLD+A F+ M +K D +Y+ ++ AL GK+D+ +E ++D G
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 459
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 10/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V YS ++ + D ++ K GV+ + Y +L+ GY
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK--GVLPNNWTYNNLIYGYSST 302
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + E S+ V + ++ +LC GK EA +FD M + P
Sbjct: 303 GQWKEAVRVFKEM--RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP--- 357
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ S+ +M +GY +G D ++F M +PD +FN LI GML +A
Sbjct: 358 --NVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMI 415
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM D GV PD TY ++ A + ++DD F +M+D G+ P+ Y+ L+
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFC 475
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
G L +AK +IM + +D + ++ L G++
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 145/333 (43%), Gaps = 11/333 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G D V Y ++ R G D F ++ ++ GV D Y L++G+ G
Sbjct: 423 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ--GVAPDKYAYHCLIQGFCTHGSL 480
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A E +E + N+ + + V +S+++ LC G+ +A +FD N P +
Sbjct: 481 LKAKELISEIM--NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVV-- 536
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++++ DGYC G+ + A+ VF M P+ + + L++ CK G + E L+
Sbjct: 537 ---YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KG+ P Y +++D FE R F +M +SG+ N YN ++ L +
Sbjct: 594 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNR 653
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
DEA F ++ +K++ + M+ + +++E ++ I G +
Sbjct: 654 CFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYS 713
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
+ L KEG EE + + E +R
Sbjct: 714 IMIT-NLIKEGLVEEAEDMFSSMQNAGCEPDSR 745
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 112/237 (47%), Gaps = 9/237 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VVYS LM G+ G + R+F+ + G+ + VVYG+L+ GY G +
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS--AGIEPNDVVYGTLVNGYCKIGRID 586
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + E + +K S + N ++D L G+ A F M +A+N
Sbjct: 587 EGLSLFREML--QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG-----IAMNK 639
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ G F +AI +F+++ + ++ N +I + + + EA++L+
Sbjct: 640 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFAS 699
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+S G+ P TY +++ + V++ F M ++G P+ + N +V +L++
Sbjct: 700 ISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 756
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L VN+ N + G+C R +A+++ + E C PD S++ L+ LC G +A
Sbjct: 142 LRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201
Query: 179 EELYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++L M++ G +PD Y ++D F+ V+ F++MV G+ P+ Y+ +V
Sbjct: 202 DDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVV 261
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
L + +D+A++F MV K + ++ +Y ++ S G+ E + +
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRV 311
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 9/220 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VVY L+ G+ + G D LF E+ +K G+ ++Y ++ G F
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQK--GIKPSTILYNIIIDGLFEA 617
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A ++E S + M+ N VL L N FDEA+ LF ++ + +
Sbjct: 618 GRTVPAKVKFHEMT--ESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMN-----V 670
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N+ + N M G R ++A ++F + P ++++ +I L K G++ EAE+
Sbjct: 671 KINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAED 730
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++ M + G PD ++ + N + Y K+
Sbjct: 731 MFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 770
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 15/134 (11%)
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
++P +TY +LMD C +R + +F +++ +GLR N+ + N L+ + DEA
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEA- 165
Query: 250 SFFDIMVKKLK-----MDDASYKFMMKALSDGGK---LDEILEIV---GGILDDGGIEFS 298
DI++ + D SY ++K+L D GK D++L ++ G + + +S
Sbjct: 166 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYS 223
Query: 299 EELQEFVK-GELSK 311
+ F K G+++K
Sbjct: 224 TVIDGFFKEGDVNK 237
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 163/357 (45%), Gaps = 48/357 (13%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V+SY L+ G + S L + + + G D V Y +++ G+F +G ++A
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGS 126
Y+E + + + + V NS++ ALC D+A+++ M KN P N +
Sbjct: 220 GTYHEML--DRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMP------NCRT 271
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + GYC G+ K+AI +KM PD +++N+L+D LCKNG EA +++ M+
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331
Query: 187 DKGVNPDEYTYGLLMD------ACFEVN-----------------------------RVD 211
+G+ P+ TYG L+ A E++ +VD
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
F KM GL P+ Y ++G L + G +++A +F+ M+ ++L + Y ++
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+L K D+ E++ +LD GI + KEGR E KL + R
Sbjct: 452 HSLCIFDKWDKAKELILEMLDR-GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 153/319 (47%), Gaps = 13/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V+S L+ + + G D +F +++++ G+ D V YG+++
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ--GLNPDTVTYGTVIGILCKS 422
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+AM + + + E S + NS++ +LC K+D+A +L M + + +
Sbjct: 423 GRVEDAMRYFEQMIDERLSP--GNIVYNSLIHSLCIFDKWDKAKELILEMLD-----RGI 475
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ FN + D +C +GR ++ ++F M P+ ++++ LID C G + EA +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATK 535
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G+ PD TY L++ +++R++D FR+M SG+ P++ YN ++ L
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI-LDDGGIEFS 298
Q AK + I +++ ++Y ++ L DE L + + L D ++
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--LQLE 653
Query: 299 EELQEFVKGELSKEGREEE 317
+ G L K GR +E
Sbjct: 654 TRTFNIMIGALLKVGRNDE 672
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 9/252 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + V Y+ ++ + D + + + GV+ + Y S++ GY
Sbjct: 225 MLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKN--GVMPNCRTYNSIVHGYCSS 282
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + + V+ V NS++D LC NG+ EA K+FD M P+
Sbjct: 283 GQPKEAIGFLKKM--HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE-- 338
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ + GY +G + + M P+ F+ LI K G + +A
Sbjct: 339 ---ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M +G+NPD TYG ++ + RV+D YF +M+D L P VYN L+ L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 241 QVGMLDEAKSFF 252
D+AK
Sbjct: 456 IFDKWDKAKELI 467
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 146/302 (48%), Gaps = 10/302 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+VY+ L+ D L E+ ++ G+ D + + S++ + +G E+ + +
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDR--GICLDTIFFNSIIDSHCKEGRVIESEKLF 502
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ V VK + + ++++D C GK DEA KL M + P + ++N +
Sbjct: 503 DLMV--RIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP-----DCVTYNTL 555
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+GYC R +DA+ +FR+M SPD +++N ++ L + A A+ELY +++ G
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+ TY +++ + N D+ F+ + + L+ +N ++G L++VG DEAK
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675
Query: 251 FFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
F + L D +Y M + L + G L+E+ ++ + ++G S L V+ L
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735
Query: 310 SK 311
+
Sbjct: 736 QR 737
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 5/207 (2%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G C R DA++ V R+M + C P+ S+N L+ LC EA EL
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187
Query: 185 MSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M D G PD +Y +++ F+ +D + +M+D G+ PN+ YN ++ L +
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKA 247
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+D+A MVK M + +Y ++ G+ E + + + D G+E
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD-GVEPDVVT 306
Query: 302 QEFVKGELSKEGREEEVVKLMEKKERE 328
+ L K GR E K+ + +
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKR 333
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 137/314 (43%), Gaps = 40/314 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G D + ++ ++ ++G +S+ +F L + GV + + Y +L+ GY
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI-----GVKPNIITYSTLIDGY 524
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
+ G +EA + V + +K V N++++ C + ++AL LF M++ P
Sbjct: 525 CLAGKMDEATKLLASMV--SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 118 KRLAVN------------------------------LGSFNVMADGYCGQGRFKDAIEVF 147
+ N L ++N++ G C +A+ +F
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ + +T +FN +I L K G EA++L+ +S G+ PD TY L+ + E
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
+++ F M ++G N + N +V KL+Q G + A ++ ++ +K +AS
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTA 762
Query: 268 FMMKALSDGGKLDE 281
+ L GGK E
Sbjct: 763 SLFLDLLSGGKYQE 776
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V P+ TYG+L+ +C R+D G ++ G R + +
Sbjct: 70 AAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAF 129
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLKM-----DDASYKFMMKALSDGGKLDEILEIVG 287
L+ L +A DI+++++ + SY ++K L D + E LE++
Sbjct: 130 TPLLKGLCADKRTSDA---MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQ 186
Query: 288 GILDDGG------IEFSEELQEFVK-GELSK 311
+ DDGG + ++ + F K G+L K
Sbjct: 187 MMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 131 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 189 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDDANELFDEML-----VKGLVPNG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A +L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD++TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKG 395
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V +GV + +L+ G+
Sbjct: 197 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P +
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKF 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M +G P++ YN L+
Sbjct: 368 MLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLM 423
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 99/252 (39%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + F EA L + + AV +
Sbjct: 6 NSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE + E++ + +++ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++ + G Y + +LM + + + F + GLRP++ YN L+ +++G
Sbjct: 126 DILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 185
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M+ ++ D +Y ++ L K+D+ E+ +L G +
Sbjct: 186 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 162/383 (42%), Gaps = 65/383 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + V D + Y+ L++G + D +L E++KE G+ D V Y +L+ G +
Sbjct: 153 MLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKE--SGLTPDTVAYNALLNGLCKQ 210
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
EE + E V + + + N+V+ LC +GK++EA K+ ++M + P
Sbjct: 211 NQLEEVSKLLEEMV--EAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVV 268
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+R A + ++ + G+ R DA V M
Sbjct: 269 TYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDM 328
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+ SPD +++N L+D LCK G L EA EL M +K PD TY +L++ ++ +V
Sbjct: 329 FKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKV 388
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM--------------- 255
DD M++ G +PNL +N ++ + G +DE ++M
Sbjct: 389 DDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTL 448
Query: 256 ---------------VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+ + D ASY M++ L GK++E E++ ++ G +
Sbjct: 449 IDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVM-DLMTKQGCPPTSS 507
Query: 301 LQEFVKGELSKEGREEEVVKLME 323
+ G L R +E +K+++
Sbjct: 508 HYALIIGGLCDVERGDEALKMLQ 530
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 136/275 (49%), Gaps = 16/275 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V ++ ++ GF + G D ++ E +KE D V Y +L+ GY
Sbjct: 398 MLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV--SCTPDVVTYSTLIDGYCKA 455
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A A+ S K S +S+L+ LC+ GK +EA ++ D M + PP
Sbjct: 456 NRMQDAF-----AILGISPDKASY---SSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTS- 506
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ G C R +A+++ + M E C P+ +++ LI+ LCK + +A
Sbjct: 507 ----SHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAIN 562
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M +KG PD TY L+D ++N++D F+ M DSG P+ YN L+
Sbjct: 563 VLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFC 622
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
Q G +++A +M++K D A+Y +M++L+
Sbjct: 623 QSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLT 657
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 12/271 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y L+ GF R G+S V + E+ + D + + +++K Y G + A+ +
Sbjct: 26 TYGALITGFSRAGNSKMVLEIANEMLAR--RFSPDVITHNTILKAYCQIGDLDRALSHFR 83
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+ + + A ++ LC + DEA +L D M + P + +N +
Sbjct: 84 GKMWCSPT----AFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHP-----DAAVYNCLI 134
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G C G+ A V + M E C PD +++ +LI C+ L EA +L +M + G+
Sbjct: 135 AGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLT 194
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
PD Y L++ + N++++ + +MV++G P+ YN +V L + G +EA
Sbjct: 195 PDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKI 254
Query: 252 FDIMV-KKLKMDDASYKFMMKALSDGGKLDE 281
+ M+ KK D +Y +M K+DE
Sbjct: 255 LEKMIEKKCGPDVVTYNSLMDGFCKVSKMDE 285
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 141/326 (43%), Gaps = 17/326 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + F D + ++ ++ + + GD D R + K+ Y L+ G
Sbjct: 50 MLARRFSPDVITHNTILKAYCQIGDLD---RALSHFRGKMW-CSPTAFTYCILIHGLCQC 105
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA + +E + ++ A N ++ LC GK D A + M P
Sbjct: 106 QRIDEAYQLLDEMIQKDCHP--DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVP--- 160
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + G C +A ++ KM E +PDT+++N L++ LCK L E +
Sbjct: 161 --DVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSK 218
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM + G PD ++Y ++ E + ++ KM++ P++ YN L+
Sbjct: 219 LLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFC 278
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+V +DEA+ + MV ++ +Y ++ S +L + ++ + G S
Sbjct: 279 KVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAG---ISP 335
Query: 300 ELQEF--VKGELSKEGREEEVVKLME 323
+L + + L K G+ EE +L+E
Sbjct: 336 DLVTYNCLLDGLCKAGKLEEAHELLE 361
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 6/170 (3%)
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P ++ LI + G E+ EM + +PD T+ ++ A ++ +D ++
Sbjct: 22 PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81
Query: 217 FR-KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
FR KM S P Y L+ L Q +DEA D M++K D A Y ++ L
Sbjct: 82 FRGKMWCS---PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
GK+D ++ +L+ + + G + +E KLMEK
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVG-CCQTNALDEARKLMEK 187
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 148/295 (50%), Gaps = 13/295 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V+Y+ L+ R+G ++ +++ E+ G+ + V Y L+ +G
Sbjct: 212 RGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMER--GLEPNVVTYNVLINSMCKEGSV 269
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAM N + V + AV N+++ L + DEA+ L + M + + N
Sbjct: 270 KEAMSLRNNML--EKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGET---MVEPN 324
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN + G C GR + A +V M E C+ + ++FN LI L + + +A EL
Sbjct: 325 VVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMD 384
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM+ G+ PD +TY +L++ ++ +VD + KM G+ P L Y L+ L + G
Sbjct: 385 EMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQG 444
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKA---LSDGGKLDEILEIVGGILDDGGI 295
M+++A++FFD M K K+D +Y M+ L D +E L+ +LD+G I
Sbjct: 445 MMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLK---HMLDEGLI 496
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 127/283 (44%), Gaps = 14/283 (4%)
Query: 7 VADPVVYSYLMLGFVRDGDS-DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
V D V Y+ ++ R G D L + + V Y +LM+ + +
Sbjct: 75 VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHE---TRPTAVSYTTLMRALCAERRTGQ 131
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A+ + + S V+ V +++ LC+ D+A++L M P N+
Sbjct: 132 AVGLLRDM--QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEP-----NVV 184
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ + GYC GR++ +VF +M PD + + LID LC+ G + +A ++ +M
Sbjct: 185 VYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKM 244
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
++G+ P+ TY +L+++ + V + + M++ G+ + YN L+ L V +
Sbjct: 245 MERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEM 304
Query: 246 DEAKSFFDIMVKKLKM---DDASYKFMMKALSDGGKLDEILEI 285
DEA + M+ M + ++ ++ L G++ + ++
Sbjct: 305 DEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQV 347
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 120/309 (38%), Gaps = 84/309 (27%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ L+ ++G L + EK GV D V Y +L+ G +
Sbjct: 244 MMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEK--GVALDAVTYNTLITG--LS 299
Query: 61 GMEE--EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G+ E EAM E + + V+ + V NSV+ LC G+ +A ++ D M
Sbjct: 300 GVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENG---- 355
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID----------- 167
A NL +FN++ G + K A+E+ +M PD+ +++ LI+
Sbjct: 356 -CACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRA 414
Query: 168 ------------------------QLCKNGMLAEA------------------------- 178
LC+ GM+ +A
Sbjct: 415 ESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGA 474
Query: 179 ---------EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT--YFRKMVDSGLRP 227
EE M D+G+ PD TY +L++ N D GA ++M SG P
Sbjct: 475 CRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLIN--MFANSGDLGAAERVLKQMTASGFVP 532
Query: 228 NLAVYNRLV 236
++AV++ L+
Sbjct: 533 DVAVFDSLI 541
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + D V YS L+ F GD R+ +++ G V D V+ SL+KGY K
Sbjct: 490 MLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTA--SGFVPDVAVFDSLIKGYGAK 547
Query: 61 GMEEEAMECYNEAVGEN--------SSVKMSAVANN 88
G E+ +E E ++ S++ VANN
Sbjct: 548 GDTEKVLELIREMTAKDIALDSKIISTIYTCLVANN 583
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 79/193 (40%), Gaps = 10/193 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ GF + D L +++ G+ + V Y L+ +
Sbjct: 386 MASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRD--GIEPELVHYIPLLAALCEQ 443
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM E+A ++E + + K+ VA ++++ C A + M +E P +
Sbjct: 444 GMMEQARNFFDEM---HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSV 500
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++++ + + G A V ++M PD F++LI G + E
Sbjct: 501 -----TYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLE 555
Query: 181 LYGEMSDKGVNPD 193
L EM+ K + D
Sbjct: 556 LIREMTAKDIALD 568
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 153/324 (47%), Gaps = 11/324 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ GF ++GDSD + + E+ ++ G++ D V Y S++ +
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR--GILPDVVTYNSIIAALCKAQAMD 248
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+AME N V + V + NS+L C++G+ EA+ +M+++ P ++
Sbjct: 249 KAMEVLNTMV--KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEP-----DV 301
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++++ D C GR +A ++F M + P+ ++ L+ G L E L
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G++PD Y + +L+ A + +VD F KM GL PN Y ++G L + G
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+++A +F+ M+ + L + Y ++ L K + E++ +LD GI +
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR-GICLNTIFFN 480
Query: 304 FVKGELSKEGREEEVVKLMEKKER 327
+ KEGR E KL E R
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVR 504
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 146/315 (46%), Gaps = 41/315 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V+S L+ + + G D +F +++++ G+ + V YG+++
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ--GLNPNAVTYGAVIGILCKS 419
Query: 61 GMEEEAMECYNEAVGENSS---------------------------------VKMSAVAN 87
G E+AM + + + E S + ++ +
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 479
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
NS++D+ C G+ E+ KLF+ M P N+ ++N + +GYC G+ +A+++
Sbjct: 480 NSIIDSHCKEGRVIESEKLFELMVRIGVKP-----NVITYNTLINGYCLAGKMDEAMKLL 534
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M P+T++++ LI+ CK + +A L+ EM GV+PD TY +++ F+
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASY 266
R + ++ +SG + L+ YN ++ L + + D+A F ++ + LK++ ++
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Query: 267 KFMMKALSDGGKLDE 281
M+ AL G+ DE
Sbjct: 655 NIMIDALLKVGRNDE 669
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G C R DA++ V R+M E C P+ S+N L+ LC EA EL
Sbjct: 124 AFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183
Query: 185 MSDK---GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M+D G PD +Y +++ F+ D + + +M+D G+ P++ YN ++ L +
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243
Query: 242 VGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+D+A + MVK M D +Y ++ G+ E + + + D G+E
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSD-GVEPDVV 302
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKERE 328
+ L K GR E K+ + +
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 127/282 (45%), Gaps = 19/282 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDG-----VVYGSLMKGYFM 59
G + + Y+ L+ G+ G D +L L G+VS G V Y +L+ GY
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKL-------LSGMVSVGLKPNTVTYSTLINGYCK 558
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
E+A+ + E E+S V + N +L L + A +L+ R+
Sbjct: 559 ISRMEDALVLFKEM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT---- 612
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ L ++N++ G C DA+++F+ + + +FN +ID L K G EA+
Sbjct: 613 -QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L+ S G+ P+ +TY L+ + +++ F M D+G + + N +V +L
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 731
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+Q G + A ++ ++ +K +AS + L GGK E
Sbjct: 732 LQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQE 773
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V PD TYG+L+ C R+D G ++ G R + +
Sbjct: 66 AAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAF 125
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASYKFMMKALSDGGKLDEILEIVG 287
L+ L +A DI+++++ + SY ++K L D + E LE++
Sbjct: 126 TPLLKGLCADKRTSDA---MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLH 182
Query: 288 GILDDGG 294
+ DD G
Sbjct: 183 MMADDRG 189
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 164/394 (41%), Gaps = 74/394 (18%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G+ D V Y+ L+ GF + G+ D ++F+ ++ G V D V Y +L+ G+
Sbjct: 36 MIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKR--GFVPDVVTYNALINGFCKA 93
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE------------------ 102
+EA V EN + V NS+++ LC NG+ DE
Sbjct: 94 DKLDEAQRILQRMVSEN--LVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYS 151
Query: 103 ---------------ALKLFDRMKNEHNPPKRLAVNL----------------------- 124
ALKLF + + P+ N+
Sbjct: 152 TLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVK 211
Query: 125 -------GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
++ V DG C GR +DA+ + + M E C PD +S N +I+ LCK + E
Sbjct: 212 HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDE 271
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
AE L M KG +P+ ++ L+ + T F++M+ G++P + YN LV
Sbjct: 272 AEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVD 331
Query: 238 KLV---QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L Q G + EA + FD M++K ++ D +Y ++ L GKLD+ ++G + G
Sbjct: 332 GLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG 391
Query: 294 GIEFSEELQEFVKGELSKEGREEEV---VKLMEK 324
I + G E +E + V ++EK
Sbjct: 392 CIPNVYTYNSLISGLCGLEKVDEALELFVAMVEK 425
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 137/295 (46%), Gaps = 13/295 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G + + Y +L+ G G +A Y + S + V N++L C G+ D
Sbjct: 5 GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDV--VTYNTLLHGFCKVGELD 62
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EALK+FD P ++ ++N + +G+C + +A + ++M PD ++
Sbjct: 63 EALKIFDGAVKRGFVP-----DVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVT 117
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKM 220
+N+L++ LCKNG + EA L + DKG +P+ TY L+ C E+ V + F +
Sbjct: 118 YNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSV 174
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
+ G P + YN L+ L++ ++EA F +VK L+ D +Y + L G++
Sbjct: 175 LKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 234
Query: 280 DEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKA 334
++ L ++ + + G + + G L KE R +E L+ E + A
Sbjct: 235 EDALLMLKDMDEKGCVPDVVSHNAVING-LCKEKRVDEAEVLLSGMEAKGCSPNA 288
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 12/236 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G D + Y+ + G + G + + +++ EK G V D V + +++ G +
Sbjct: 212 HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK--GCVPDVVSHNAVINGLCKEKRV 269
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + E +A++ N+++ C GK+ +A+ F M P +
Sbjct: 270 DEAEVLLSGM--EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVV--- 324
Query: 124 LGSFNVMADGYC---GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N++ DG C +GR K+AI +F M E PD ++++ LID L K G L +A
Sbjct: 325 --TYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARR 382
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
L G M KG P+ YTY L+ + +VD+ F MV+ G P+ Y ++
Sbjct: 383 LLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V D V ++ ++ G ++ D L ++ K G + + + +L+ G G
Sbjct: 247 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK--GCSPNAISFNTLICGQCRAGKW 304
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALC---NNGKFDEALKLFDRMKNEHNPPKRL 120
++AM + E + VK + V N ++D LC G+ EA+ LFD M + P
Sbjct: 305 KKAMTTFKEML--KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP--- 359
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + DG G+ DA + M C P+ ++N+LI LC + EA E
Sbjct: 360 --DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA 203
L+ M +KG PD TYG ++ A
Sbjct: 418 LFVAMVEKGCVPDTITYGTIISA 440
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G P+ TY L+ R+ D + +M+ +G P++ YN L+ +VG
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
LDEA FD VK+ D +Y ++ KLDE I+ ++ + +
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 304 FVKGELSKEGREEEVVKLMEKK 325
V G L K GR +E L+ K
Sbjct: 121 LVNG-LCKNGRVDEARMLIVDK 141
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 133/278 (47%), Gaps = 10/278 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ VKG D ++ L+ + GD RLFEE+K G D V Y L+
Sbjct: 398 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKS--SGCTPDEVTYNILIDHLCSM 455
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A++ NE E++ S V N+++DALC + +EA ++FD+M + R
Sbjct: 456 GKLGNALDLLNEM--ESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQG--ISRS 511
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
AV +FN + DG C R DA E+ +M + P+ +++N+++ CK G + +A +
Sbjct: 512 AV---TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAAD 568
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M+ G D TYG L++ + R R M G+RP YN ++ L
Sbjct: 569 ILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLF 628
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGG 277
+ L +A + F M + + DA +YK + ++L GG
Sbjct: 629 RRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGG 666
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 139/290 (47%), Gaps = 10/290 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ ++ ++G+ D + ++ ++ G + D + +L+ +
Sbjct: 328 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDR--GCLPDTTTFNTLIVALSSQ 385
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA++ E + S + N +++ALC G ++LF+ MK+ P +
Sbjct: 386 NRLEEALDLARELTVKGLSPDVYTF--NILINALCKVGDPHLGIRLFEEMKSSGCTPDEV 443
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N++ D C G+ +A+++ +M C T+++N +ID LCK + EAEE
Sbjct: 444 -----TYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEE 498
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M +G++ T+ L+D + R+DD +MV GL+PN YN ++
Sbjct: 499 VFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYC 558
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
+ G + +A + M ++D +Y ++ L G+ L+++ G+
Sbjct: 559 KQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 608
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 138/315 (43%), Gaps = 11/315 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V + L+ R + EE+ GV D + +LM+G+ +G
Sbjct: 191 RGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSH--GVAPDETTFTTLMQGFIEEGSI 248
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A+ +A + + V N +++ C G+ ++AL + + P ++
Sbjct: 249 EAALRV--KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQV--- 303
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N G C G A++V M + PD ++N +I+ L KNG L EA+ +
Sbjct: 304 --TYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVN 361
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M D+G PD T+ L+ A NR+++ R++ GL P++ +N L+ L +VG
Sbjct: 362 QMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVG 421
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
F+ M D+ +Y ++ L GKL L+++ ++ G S
Sbjct: 422 DPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNE-MESNGCPRSTVTY 480
Query: 303 EFVKGELSKEGREEE 317
+ L K+ R EE
Sbjct: 481 NTIIDALCKKMRIEE 495
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 43/279 (15%)
Query: 81 KMSAVANNSVLDALCNNGKFDEALKL-FDRMKNEHNPPKRLAVNLGSF-NVMADGYCGQG 138
++ AV S +++ +FD+A+ L +++ N+ + V NV+ +G
Sbjct: 121 QVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEG----S 176
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ K V+ +M PD ++ N LI LC+ + A + EMS GV PDE T+
Sbjct: 177 KLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFT 236
Query: 199 LLMDACFE-----------------------------------VNRVDDGATYFRKMVDS 223
LM E + RV+D Y ++ +
Sbjct: 237 TLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD 296
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEI 282
G P+ YN V L Q G + A D+M+++ D +Y ++ LS G+LDE
Sbjct: 297 GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 356
Query: 283 LEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
IV ++D G + + + LS + R EE + L
Sbjct: 357 KGIVNQMVDRGCLPDTTTFNTLIVA-LSSQNRLEEALDL 394
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 163/357 (45%), Gaps = 48/357 (13%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V+SY L+ G D S L + + + G D V Y +++ G+F +G ++A
Sbjct: 160 PNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGS 126
Y+E + + + + V +S++ ALC D+A+++ M KN P N +
Sbjct: 220 GTYHEML--DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP------NCRT 271
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + GYC G+ K+AI +KM PD +++N+L+D LCKNG EA +++ M+
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331
Query: 187 DKGVNPDEYTYGLLMD------ACFEVN-----------------------------RVD 211
+G+ P+ TYG L+ A E++ +VD
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
F KM GL P+ Y ++G L + G +++A +F+ M+ ++L + Y ++
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+L K D+ E++ +LD GI + KEGR E KL + R
Sbjct: 452 HSLCIFDKWDKAKELILEMLDR-GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 153/319 (47%), Gaps = 13/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V+S L+ + + G D +F +++++ G+ D V YG+++
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ--GLNPDTVTYGTVIGILCKS 422
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+AM + + + E S + NS++ +LC K+D+A +L M + + +
Sbjct: 423 GRVEDAMRYFEQMIDERLSP--GNIVYNSLIHSLCIFDKWDKAKELILEMLD-----RGI 475
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ FN + D +C +GR ++ ++F M PD ++++ LID C G + EA +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G+ PD TY L++ +++R++D FR+M SG+ P++ YN ++ L
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI-LDDGGIEFS 298
Q AK + I +++ ++Y ++ L DE L + + L D ++
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--LQLE 653
Query: 299 EELQEFVKGELSKEGREEE 317
+ G L K GR +E
Sbjct: 654 TRTFNIMIGALLKVGRNDE 672
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 138/329 (41%), Gaps = 45/329 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + V YS ++ + D + + + GV+ + Y S++ GY
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN--GVMPNCRTYNSIVHGYCSS 282
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + + V+ V NS++D LC NG+ EA K+FD M P+
Sbjct: 283 GQPKEAIGFLKKM--HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE-- 338
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ + GY +G + + M P+ F+ LI K G + +A
Sbjct: 339 ---ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M +G+NPD TYG ++ + RV+D YF +M+D L P VYN L+ L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 241 QVGMLDEAK-----------------------------------SFFDIMVK-KLKMDDA 264
D+AK FD+MV+ +K D
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y ++ GK+DE +++ ++ G
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 145/302 (48%), Gaps = 10/302 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+VY+ L+ D L E+ ++ G+ D + + S++ + +G E+ + +
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDR--GICLDTIFFNSIIDSHCKEGRVIESEKLF 502
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ V VK + ++++D C GK DEA KL M + P + ++N +
Sbjct: 503 DLMV--RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP-----DCVTYNTL 555
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+GYC R +DA+ +FR+M SPD +++N ++ L + A A+ELY +++ G
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+ TY +++ + N D+ F+ + + L+ +N ++G L++VG DEAK
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675
Query: 251 FFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
F + L D +Y M + L + G L+E+ ++ + ++G S L V+ L
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735
Query: 310 SK 311
+
Sbjct: 736 QR 737
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 137/314 (43%), Gaps = 40/314 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G D + ++ ++ ++G +S+ +F L + GV D + Y +L+ GY
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI-----GVKPDIITYSTLIDGY 524
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
+ G +EA + V + +K V N++++ C + ++AL LF M++ P
Sbjct: 525 CLAGKMDEATKLLASMV--SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 118 KRLAVN------------------------------LGSFNVMADGYCGQGRFKDAIEVF 147
+ N L ++N++ G C +A+ +F
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ + +T +FN +I L K G EA++L+ +S G+ PD TY L+ + E
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
+++ F M ++G N + N +V KL+Q G + A ++ ++ +K +AS
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTA 762
Query: 268 FMMKALSDGGKLDE 281
+ L GGK E
Sbjct: 763 SLFLDLLSGGKYQE 776
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 5/215 (2%)
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
K V+ +F M G C R DA++ V R+M + C P+ S+N L+ LC +
Sbjct: 120 KGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQ 179
Query: 177 EAEELYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
EA EL M D G PD +Y +++ F+ +D + +M+D G+ PN+ Y+
Sbjct: 180 EALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSS 239
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
++ L + +D+A MVK M + +Y ++ G+ E + + + D
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD- 298
Query: 294 GIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
G+E + L K GR E K+ + +
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V P+ TYG+LM +C R+D G ++ G + +
Sbjct: 70 AAAVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAF 129
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLKM-----DDASYKFMMKALSDGGKLDEILEIVG 287
++ L +A DI+++++ + SY ++K L D + E LE++
Sbjct: 130 TPMLKGLCADKRTSDA---MDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQ 186
Query: 288 GILDDGG------IEFSEELQEFVK-GELSK 311
+ DDGG + ++ + F K G+L K
Sbjct: 187 MMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 10/290 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF D V+Y+ L+ G + G + RL +++ G D VVYG+L+
Sbjct: 170 MIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEK--GNCQPDVVVYGTLIHSLCKD 227
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ +A ++E + + S + V NS++ ALCN G++ L + M + P
Sbjct: 228 RQQTQAFNLFSEMITKGISPNI--VTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMP--- 282
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N S + D C +G A +V M + PD +++ LID C + EA +
Sbjct: 283 --NAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVK 340
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M KG P+ ++Y L++ ++ R+D F +M L PN YN L+ L
Sbjct: 341 VFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLC 400
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGI 289
VG L +A + F MV ++ D +Y+ ++ L LD+ + ++ I
Sbjct: 401 HVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAI 450
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 109/212 (51%), Gaps = 7/212 (3%)
Query: 41 GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF 100
GV D V Y +L+ G+ ++ +EA++ ++ V + + + + N++++ C +
Sbjct: 313 SGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAP--NVFSYNTLINGYCKIERM 370
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
D+A+ LF+ M + +L N ++N + G C GR +DAI +FR+M PD +
Sbjct: 371 DKAMYLFEEMCRQ-----KLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLV 425
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++ L+D LCKN L +A L + ++PD Y +++D ++D F +
Sbjct: 426 TYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNL 485
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
GL+PN+ YN + L + G+LDEA F
Sbjct: 486 SSKGLKPNVWTYNIMTHGLCKRGLLDEATKLF 517
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 10/292 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D ++ L+ G +G LF+++ + G D V+Y +L+ G G
Sbjct: 139 GCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWE--GFQPDVVIYATLINGLCKTGHTS 196
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ E + + V +++ +LC + + +A LF M K ++ N+
Sbjct: 197 AAIRLLRSM--EKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMIT-----KGISPNI 249
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ N + C G +K + +M + + P+ +S ++D LCK GM+A+A ++
Sbjct: 250 VTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDM 309
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M GV PD TY L+D + +D+ F MV G PN+ YN L+ ++
Sbjct: 310 MFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIER 369
Query: 245 LDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+D+A F+ M + KL + +Y ++ L G+L + + + ++ G I
Sbjct: 370 MDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQI 421
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 35/257 (13%)
Query: 100 FDEALKLFDRMKNEHNPP---------------KRLAV---------------NLGSFNV 129
D+AL F+RM + H PP KR + N+ + NV
Sbjct: 55 LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ + +C R A V K+ + C PDT SF LI LC G + EA L+ +M +G
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
PD Y L++ + R M +P++ VY L+ L + +A
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGE 308
+ F M+ K + + + ++ AL + G+ + ++ ++D + + L V
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDA- 293
Query: 309 LSKEG---REEEVVKLM 322
L KEG + +VV +M
Sbjct: 294 LCKEGMVAQAHDVVDMM 310
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 163/357 (45%), Gaps = 48/357 (13%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V+SY L+ G + S L + + + G D V Y +++ G+F +G ++A
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGS 126
Y+E + + + + V +S++ ALC D+A+++ M KN P N +
Sbjct: 220 GTYHEML--DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP------NCRT 271
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + GYC G+ K+AI +KM PD +++N+L+D LCKNG EA +++ M+
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331
Query: 187 DKGVNPDEYTYGLLMD------ACFEVN-----------------------------RVD 211
+G+ P+ TYG L+ A E++ +VD
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
F KM GL P+ Y ++G L + G +++A +F+ M+ ++L + Y ++
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+L K D+ E++ +LD GI + KEGR E KL + R
Sbjct: 452 HSLCIFDKWDKAKELILEMLDR-GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 153/319 (47%), Gaps = 13/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V+S L+ + + G D +F +++++ G+ D V YG+++
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ--GLNPDTVTYGTVIGILCKS 422
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+AM + + + E S + NS++ +LC K+D+A +L M + + +
Sbjct: 423 GRVEDAMRYFEQMIDERLSP--GNIVYNSLIHSLCIFDKWDKAKELILEMLD-----RGI 475
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ FN + D +C +GR ++ ++F M PD ++++ LID C G + EA +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G+ PD TY L++ +++R++D FR+M SG+ P++ YN ++ L
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI-LDDGGIEFS 298
Q AK + I +++ ++Y ++ L DE L + + L D ++
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--LQLE 653
Query: 299 EELQEFVKGELSKEGREEE 317
+ G L K GR +E
Sbjct: 654 TRTFNIMIGALLKVGRNDE 672
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 142/329 (43%), Gaps = 45/329 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + V YS ++ + D + + + GV+ + Y S++ GY
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN--GVMPNCRTYNSIVHGYCSS 282
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + + V+ V NS++D LC NG+ EA K+FD M P+
Sbjct: 283 GQPKEAIGFLKKM--HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE-- 338
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ + GY +G + + M P+ F+ LI K G + +A
Sbjct: 339 ---ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL- 239
++ +M +G+NPD TYG ++ + RV+D YF +M+D L P VYN L+ L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 240 ----------VQVGMLD------------------------EAKSFFDIMVK-KLKMDDA 264
+ + MLD E++ FD+MV+ +K D
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y ++ GK+DE +++ ++ G
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 149/309 (48%), Gaps = 15/309 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+VY+ L+ D L E+ ++ G+ D + + S++ + +G E+ + +
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDR--GICLDTIFFNSIIDSHCKEGRVIESEKLF 502
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ V VK + ++++D C GK DEA KL M + P + ++N +
Sbjct: 503 DLMV--RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP-----DCVTYNTL 555
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+GYC R +DA+ +FR+M SPD +++N ++ L + A A+ELY +++ G
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+ TY +++ + N D+ F+ + + L+ +N ++G L++VG DEAK
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675
Query: 251 FFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV---- 305
F + L D +Y M + L + G L+E+ ++ + ++G S L V
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735
Query: 306 -KGELSKEG 313
+G++++ G
Sbjct: 736 QRGDITRAG 744
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 147/337 (43%), Gaps = 44/337 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G D + ++ ++ ++G +S+ +F L + GV D + Y +L+ GY
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI-----GVKPDIITYSTLIDGY 524
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
+ G +EA + V + +K V N++++ C + ++AL LF M++ P
Sbjct: 525 CLAGKMDEATKLLASMV--SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 118 KRLAVN------------------------------LGSFNVMADGYCGQGRFKDAIEVF 147
+ N L ++N++ G C +A+ +F
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ + +T +FN +I L K G EA++L+ +S G+ PD TY L+ + E
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
+++ F M ++G N + N +V KL+Q G + A ++ ++ +K +AS
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTA 762
Query: 268 FMMKALSDGGKLDEILEIV-GGILDDGGIEFSEELQE 303
+ L GGK E + GGI + + E+QE
Sbjct: 763 SLFLDLLSGGKYQEYHSCIRGGIFS---LCVNSEVQE 796
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 5/207 (2%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G C R DA++ V R+M + C P+ S+N L+ LC EA EL
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187
Query: 185 MSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M D G PD +Y +++ F+ +D + +M+D G+ PN+ Y+ ++ L +
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+D+A MVK M + +Y ++ G+ E + + + D G+E
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD-GVEPDVVT 306
Query: 302 QEFVKGELSKEGREEEVVKLMEKKERE 328
+ L K GR E K+ + +
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKR 333
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V P+ TYG+L+ +C R+D G ++ G R + +
Sbjct: 70 AAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAF 129
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLKM-----DDASYKFMMKALSDGGKLDEILEIVG 287
L+ L +A DI+++++ + SY ++K L D + E LE++
Sbjct: 130 TPLLKGLCADKRTSDA---MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQ 186
Query: 288 GILDDGG------IEFSEELQEFVK-GELSK 311
+ DDGG + ++ + F K G+L K
Sbjct: 187 MMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 152/324 (46%), Gaps = 11/324 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ GF ++GDSD + + E+ ++ G++ D V Y S++ +
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR--GILPDVVTYNSIIAALCKAQAMD 248
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+AME N V + V + NS+L C++G+ EA+ +M+++ P ++
Sbjct: 249 KAMEVLNTMV--KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEP-----DV 301
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++++ D C GR +A ++F M + P+ ++ L+ G L E L
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G++PD Y + +L+ A +VD F KM GL PN Y ++G L + G
Sbjct: 362 MVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+++A +F+ M+ + L + Y ++ L K + E++ +LD GI +
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR-GICLNTIFFN 480
Query: 304 FVKGELSKEGREEEVVKLMEKKER 327
+ KEGR E KL E R
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVR 504
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 139/279 (49%), Gaps = 10/279 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y ++ + G + FE++ ++ G+ +VY SL+ G
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE--GLSPGNIVYNSLIHGLCTCNKW 457
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A E E + + + ++ + NS++D+ C G+ E+ KLF+ M P N
Sbjct: 458 ERAEELILEML--DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP-----N 510
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + +GYC G+ +A+++ M P+T++++ LI+ CK + +A L+
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM GV+PD TY +++ F+ R + ++ +SG + L+ YN ++ L +
Sbjct: 571 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 630
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ D+A F ++ + LK++ ++ M+ AL G+ DE
Sbjct: 631 LTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 669
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 138/286 (48%), Gaps = 10/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V+S L+ + G D +F +++++ G+ + V YG+++
Sbjct: 362 MVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQ--GLNPNAVTYGAVIGILCKS 419
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+AM + + + E S + NS++ LC K++ A +L M + + +
Sbjct: 420 GRVEDAMLYFEQMIDEGLSP--GNIVYNSLIHGLCTCNKWERAEELILEMLD-----RGI 472
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N FN + D +C +GR ++ ++F M P+ +++N LI+ C G + EA +
Sbjct: 473 CLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G+ P+ TY L++ +++R++D F++M SG+ P++ YN ++ L
Sbjct: 533 LLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLF 592
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
Q AK + I +++ ++Y ++ L D+ L++
Sbjct: 593 QTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQM 638
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G C R DA++ V R+M E C P+ S+N L+ LC EA EL
Sbjct: 124 AFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183
Query: 185 MSDK---GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M+D G PD +Y +++ F+ D + + +M+D G+ P++ YN ++ L +
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243
Query: 242 VGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+D+A + MVK M D +Y ++ G+ E + + + D G+E
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSD-GVEPDVV 302
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKERE 328
+ L K GR E K+ + +
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 127/282 (45%), Gaps = 19/282 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDG-----VVYGSLMKGYFM 59
G + + Y+ L+ G+ G D +L L G+VS G V Y +L+ GY
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKL-------LSGMVSVGLKPNTVTYSTLINGYCK 558
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
E+A+ + E E+S V + N +L L + A +L+ R+
Sbjct: 559 ISRMEDALVLFKEM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT---- 612
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ L ++N++ G C DA+++F+ + + +FN +ID L K G EA+
Sbjct: 613 -QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L+ S G+ P+ +TY L+ + +++ F M D+G + + N +V +L
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 731
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+Q G + A ++ ++ +K +AS + L GGK E
Sbjct: 732 LQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQE 773
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V PD TYG+L+ C R+D G ++ G R + +
Sbjct: 66 AAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAF 125
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASYKFMMKALSDGGKLDEILEIVG 287
L+ L +A DI+++++ + SY ++K L D + E LE++
Sbjct: 126 TPLLKGLCADKRTSDA---MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLH 182
Query: 288 GILDDGG 294
+ DD G
Sbjct: 183 MMADDRG 189
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 149/329 (45%), Gaps = 11/329 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D ++ L+ G R + L + + K G D V YG ++ G +G +
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK--GCQPDLVTYGIVVNGLCKRGDID 238
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ + E ++ V N+++DALCN ++AL LF M N+ P N+
Sbjct: 239 LALSLLKKM--EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP-----NV 291
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + C GR+ DA + M E + +P+ ++F+ LID K G L EAE+LY E
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + ++PD +TY L++ +R+D+ F M+ PN+ YN L+ +
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+DE F M ++ L + +Y ++ + D + ++ DG +
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 304 FVKGELSKEGREEEVVKLMEKKEREKAEA 332
+ G L G+ E + + E +R K E
Sbjct: 472 LLDG-LCNNGKVETALVVFEYLQRSKMEP 499
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 116/242 (47%), Gaps = 7/242 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S V + +L A+ KFD + L ++M+N ++ NL +++++ + +C + +
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG-----ISHNLYTYSILINCFCRRSQLSL 134
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ V KM + PD ++ N+L++ C +++A L G+M + G PD +T+ L+
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKM 261
F NR + +MV G +P+L Y +V L + G +D A S M + K++
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP 254
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
Y ++ AL + +++ L + +D+ GI + + L GR + +L
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTE-MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 322 ME 323
+
Sbjct: 314 LS 315
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 116/253 (45%), Gaps = 15/253 (5%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
+N + + + +++ C + AL + +M P ++ + N + +G+C
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEP-----DIVTLNSLLNGFC 162
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
R DA+ + +M E PD+ +FN LI L ++ +EA L M KG PD
Sbjct: 163 HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLV 222
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
TYG++++ + +D + +KM + P + +YN ++ L +++A + F M
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 256 VKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI----LDDGGIEFSEELQEFVKGELS 310
K ++ + +Y +++ L + G+ + ++ + ++ + FS + FV
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV----- 337
Query: 311 KEGREEEVVKLME 323
KEG+ E KL +
Sbjct: 338 KEGKLVEAEKLYD 350
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 108/230 (46%), Gaps = 11/230 (4%)
Query: 9 DPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP +++Y L+ GF D +FE + K + V Y +L+KG+ +E
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISK--DCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
ME + E + + V +++ + D A +F +M ++ P ++ +
Sbjct: 416 MELFREM--SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP-----DIMT 468
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
++++ DG C G+ + A+ VF + + PD ++N +I+ +CK G + + +L+ +S
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
KGV P+ TY +M ++ FR+M + G P+ YN L+
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 78/195 (40%), Gaps = 39/195 (20%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ DA+ +F M + R P + F+ L+ + K L +M + G++ + YTY
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 199 LLMDACF------------------------------------EVNRVDDGATYFRKMVD 222
+L++ CF NR+ D + +MV+
Sbjct: 121 ILIN-CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
G +P+ +N L+ L + EA + D MV K + D +Y ++ L G +D
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 282 ILEIVGGILDDGGIE 296
L ++ ++ G IE
Sbjct: 240 ALSLLKK-MEQGKIE 253
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 158/365 (43%), Gaps = 51/365 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + D + + L+ GF R G + R+ E L+ G V D + Y L+ GY
Sbjct: 133 MIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN--SGAVPDVITYNVLIGGYCKS 190
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR-MKNEHNPPKR 119
G ++A++ V E SV V N++L +LC++GK EA+++ DR M+ E P
Sbjct: 191 GEIDKALQ-----VLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYP--- 242
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE-- 177
++ ++ ++ + C A+++ +M + C PD +++N LI+ +CK G L E
Sbjct: 243 ---DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 299
Query: 178 ---------------------------------AEELYGEMSDKGVNPDEYTYGLLMDAC 204
AE L +M KG +P T+ +L++
Sbjct: 300 KFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFL 359
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
+ KM G PN YN L+ Q +D A + +IMV + D
Sbjct: 360 CRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDI 419
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+Y ++ AL GK D +EI+ + G + G L+K G+ E +L+E
Sbjct: 420 VTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDG-LTKVGKTEYAAELLE 478
Query: 324 KKERE 328
+ R+
Sbjct: 479 EMRRK 483
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 116/239 (48%), Gaps = 12/239 (5%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
VR+G+ + + E + + G + D + SL++G+ G +A + ENS
Sbjct: 117 LVRNGELEEGLKFLERMIYQ--GDIPDVIACTSLIRGFCRSGKTRKATRIME--ILENSG 172
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ N ++ C +G+ D+AL++ +RM +A ++ ++N + C G+
Sbjct: 173 AVPDVITYNVLIGGYCKSGEIDKALQVLERMS--------VAPDVVTYNTILRSLCDSGK 224
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
K+A+EV + + C PD +++ LI+ C + + +A +L EM KG PD TY +
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
L++ + R+D+ + M G +PN+ +N ++ + G +A+ M++K
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK 343
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 139/317 (43%), Gaps = 35/317 (11%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D + Y+ L+ D +L +E+++K G D V Y L+ G +G +EA+
Sbjct: 242 PDVITYTILIEATCNDSGVGQAMKLLDEMRKK--GCKPDVVTYNVLINGICKEGRLDEAI 299
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN---- 123
+ N + + + +N +L ++C+ G++ +A +L M + P + N
Sbjct: 300 KFLNNM--PLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILIN 357
Query: 124 -------LG-------------------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
LG S+N + G+C + + AIE M C P
Sbjct: 358 FLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 417
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
D +++N L+ LCK+G A E+ ++S KG +P TY ++D +V + + A
Sbjct: 418 DIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELL 477
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDG 276
+M GL+P++ Y+ L+ L G +DEA K F D+ +K +Y +M L
Sbjct: 478 EEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKA 537
Query: 277 GKLDEILEIVGGILDDG 293
+ ++ + +++ G
Sbjct: 538 QQTSRAIDFLAYMVEKG 554
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 6/194 (3%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
++++ N +L C K D A++ + M + P ++ ++N + C G+
Sbjct: 383 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP-----DIVTYNTLLTALCKDGKADA 437
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+E+ ++ CSP +++N +ID L K G A EL EM KG+ PD TY L+
Sbjct: 438 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLR 497
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+VD+ F M ++P+ YN ++ L + A F MV+K K
Sbjct: 498 GLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKP 557
Query: 262 DDASYKFMMKALSD 275
A+Y +++ ++D
Sbjct: 558 TKATYTILIEGIAD 571
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 34/250 (13%)
Query: 75 GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV------------ 122
G N S A+N L L NG+ +E LK +RM + + P +A
Sbjct: 98 GVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGK 157
Query: 123 ------------------NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
++ ++NV+ GYC G A++V +M +PD +++N
Sbjct: 158 TRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNT 214
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
++ LC +G L EA E+ + PD TY +L++A + V +M G
Sbjct: 215 ILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG 274
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEIL 283
+P++ YN L+ + + G LDEA F + M + + + ++ +++++ G+ +
Sbjct: 275 CKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAE 334
Query: 284 EIVGGILDDG 293
++ +L G
Sbjct: 335 RLLADMLRKG 344
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + + Y+ L+ GF ++ D E + + G D V Y +L+ G +
Sbjct: 379 GCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR--GCYPDIVTYNTLLTALCKDGKAD 436
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+E N+ + S + + N+V+D L GK + A +L + M+ K L ++
Sbjct: 437 AAVEILNQLSSKGCSPVL--ITYNTVIDGLTKVGKTEYAAELLEEMRR-----KGLKPDI 489
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + G +G+ +AI++F M P +++N ++ LCK + A +
Sbjct: 490 ITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAY 549
Query: 185 MSDKGVNPDEYTYGLLMD 202
M +KG P + TY +L++
Sbjct: 550 MVEKGCKPTKATYTILIE 567
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 9/167 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ +DG +D + +L K G + Y +++ G
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK--GCSPVLITYNTVIDGLTKV 467
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A E E +K + +++L L GK DEA+K+F M+ P +
Sbjct: 468 GKTEYAAELLEEM--RRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAV 525
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
++N + G C + AI+ M E C P ++ LI+
Sbjct: 526 -----TYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIE 567
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 140/282 (49%), Gaps = 16/282 (5%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
+ + YS ++ G + G D LF+E+K GV+ D + Y SL+ G+ G ++A
Sbjct: 482 NAISYSIIIDGLCKCGREDEARELFKEMKAL--GVIPDVISYTSLIHGFCRSGKWKDAKY 539
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+NE V + V+ + ++D LC GK EA +L + M P N ++
Sbjct: 540 LFNEMV--DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP-----NTVTYT 592
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM-SD 187
+ G C R +A ++F KM + C PD +++ L+ LC+ G + A EL+ +M SD
Sbjct: 593 TLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSD 652
Query: 188 KG-----VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
G PD +Y +++D + R D+ F++M G+ PN+ Y L+ +
Sbjct: 653 TGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRS 712
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
G L++AK F+ MV + ++++ +Y M+ G++D+ L
Sbjct: 713 GKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 145/320 (45%), Gaps = 11/320 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D S L+ + G +L E + ++ G + D V +L+KG MK
Sbjct: 367 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQR--GCIPDVVTCTTLVKGLCMKHRIS 424
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP-PKRLAVN 123
+A + + + + + V +++ LC +G AL+L M ++ +P N
Sbjct: 425 KATQLFLKM--QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 482
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S++++ DG C GR +A E+F++M PD +S+ +LI C++G +A+ L+
Sbjct: 483 AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFN 542
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM D GV PD T+ +L+D + +V + M+ G PN Y LV L
Sbjct: 543 EMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMND 602
Query: 244 MLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDG---GIEFSE 299
+ EA F M K + D +Y +MK L G + LE+ +L D G F
Sbjct: 603 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 662
Query: 300 ELQEF--VKGELSKEGREEE 317
++ + + L K GRE+E
Sbjct: 663 DVISYSIIIDGLCKHGREDE 682
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 148/324 (45%), Gaps = 11/324 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D L+ F ++G L E + ++ G + D V Y +L+KG MK
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQR--GCILDIVTYSTLIKGLCMK 58
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP-PKR 119
EA + + + + A+A +++ LC GK + AL L M N+ + +
Sbjct: 59 HRISEATQLFMSM--KKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIK 116
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L S++++ DG C R +A E+F++M PD +S+ +LI C++G +A+
Sbjct: 117 CKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAK 176
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L+ EM D G+ D T +L+D + +V + M+ G ++ Y+ L+ L
Sbjct: 177 CLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 236
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG---GI 295
+ EA F M K + D +Y +MK L G ++ L++ +L+D GI
Sbjct: 237 CMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGI 296
Query: 296 EFSEELQEF--VKGELSKEGREEE 317
+ L + + L K+ RE+E
Sbjct: 297 KCKPTLISYSIIIDGLCKDRREDE 320
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 147/357 (41%), Gaps = 42/357 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE------------------KLG- 41
M +G + D + Y+ L+ GF R G + LF E+ + K G
Sbjct: 147 MKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGK 206
Query: 42 --------------GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
G + D V Y +L+KG MK EA + + + A+A
Sbjct: 207 VIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSM--QKLGCRPDAIAY 264
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNP-PKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
+++ LC G + AL+L M N+ + L S++++ DG C R +A E+
Sbjct: 265 GTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 324
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F++M PD +S+ LI C +G +A+ L+ EM D G+ PD T +L+D +
Sbjct: 325 FKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCK 384
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-AS 265
+V + ++ G P++ LV L + +A F M K M + +
Sbjct: 385 KGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVT 444
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDG---GIEFSEELQEF--VKGELSKEGREEE 317
+MK L G + LE+ +L D GI + + L K GRE+E
Sbjct: 445 CATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDE 501
>gi|326527525|dbj|BAK08037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 460
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 152/317 (47%), Gaps = 11/317 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ R D F + ++E GV D + Y SL+ G +G+
Sbjct: 40 GMPPDVVTYNTLLAAHCRASGLDAGFAVLHRMRE--AGVSPDAITYNSLIAGAARRGLTM 97
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ ++E + + V A + N+++ L +G ++A ++F M K +A
Sbjct: 98 RALDLFDEML--QAGVAPDAWSYNALMHCLFRSGHPEDAYRVFADMAE-----KGVAPCA 150
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG G +A +FR + +++N +I+ LCK+G + A + E
Sbjct: 151 TTYNTLLDGLFRFGHATNAYRMFRYLQRTGLPVGIVTYNTMINGLCKSGKVGYARMVLRE 210
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ P+ TY +M CF+ R D G F +++ G P+L Y ++ LV+ G
Sbjct: 211 LGRTEHAPNVVTYTTVMKCCFKYGRFDQGLETFLSLLEGGYIPDLFPYCTVISALVKKGR 270
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
++EA ++ ++M++ ++D A Y ++ GKLD+ E++ ++++GG+E E
Sbjct: 271 MEEANTYSELMIRSGFRLDSACYNTLIYLRCKEGKLDDAFELL-SMMEEGGLESDEYTFS 329
Query: 304 FVKGELSKEGREEEVVK 320
+ L K G E K
Sbjct: 330 ILVNGLCKMGHFEAAHK 346
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 136/357 (38%), Gaps = 50/357 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ LM R G + +R+F ++ EK GV Y +L+ G F
Sbjct: 106 MLQAGVAPDAWSYNALMHCLFRSGHPEDAYRVFADMAEK--GVAPCATTYNTLLDGLFRF 163
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
G A + + + + + V N++++ LC +GK A + + + EH P
Sbjct: 164 GHATNAYRMFRYL--QRTGLPVGIVTYNTMINGLCKSGKVGYARMVLRELGRTEHAP--- 218
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL------------------- 160
N+ ++ + GRF +E F + E PD
Sbjct: 219 ---NVVTYTTVMKCCFKYGRFDQGLETFLSLLEGGYIPDLFPYCTVISALVKKGRMEEAN 275
Query: 161 ----------------SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
+N LI CK G L +A EL M + G+ DEYT+ +L++
Sbjct: 276 TYSELMIRSGFRLDSACYNTLIYLRCKEGKLDDAFELLSMMEEGGLESDEYTFSILVNGL 335
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA 264
++ + M + N+ YN LV L + +D A M KLK DD
Sbjct: 336 CKMGHFEAAHKQLCYMEIRDMESNVIAYNCLVDALCKSDEVDAAIKLLHNM--KLK-DDF 392
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
+Y ++ L G+ + + L +G + + + G L G + +V K+
Sbjct: 393 TYTSLVHGLCKVGRYHMASKFLRICLREGNSILASAKRAVIAG-LRSAGFQNDVRKV 448
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 2/179 (1%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M R T N + LC+ G +A AE + + G+ PD TY L+ A +
Sbjct: 1 MTWARTQLSTRLMNVCLAALCRGGGIARAESVLVDAIRLGMPPDVVTYNTLLAAHCRASG 60
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+D G +M ++G+ P+ YN L+ + G+ A FD M++ + D SY
Sbjct: 61 LDAGFAVLHRMREAGVSPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDAWSYNA 120
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+M L G ++ + + + G + + G L + G ++ +R
Sbjct: 121 LMHCLFRSGHPEDAYRVFADMAEKGVAPCATTYNTLLDG-LFRFGHATNAYRMFRYLQR 178
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 167/364 (45%), Gaps = 38/364 (10%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G++ D V Y+ L+ G + LF + +KLG + + YG+LMKG G
Sbjct: 160 RGYIPDIVTYTTLIKGLCMEHRISKAALLFTRM-QKLG-CTPNAITYGTLMKGLCRTGNI 217
Query: 64 EEAMECYNEAVGENS----SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP-- 117
A++ + E + ++S + K ++ + ++DALC + + DEA LF+ MK + P
Sbjct: 218 SIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTV 277
Query: 118 -------------------KRL---AVNLG------SFNVMADGYCGQGRFKDAIEVFRK 149
KRL VN G +FNV+ D C +G+ +A ++
Sbjct: 278 ISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEV 337
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M + P+ L++N+LI+ C G L A EL+ M KG PD Y +L++ + ++
Sbjct: 338 MIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSK 397
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKF 268
V++ + M+ G RP++ Y L+ L Q G + +AK F +M V + D Y
Sbjct: 398 VEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGI 457
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
+ L G L E +E+ L I+ E + L K G+ E +L EK +E
Sbjct: 458 FLNGLCKNGCLFEAMELFNK-LKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQE 516
Query: 329 KAEA 332
+ +
Sbjct: 517 ELQP 520
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 119/260 (45%), Gaps = 13/260 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V + + Y+ L+ GF GD + LF + K G D + Y L+ GY
Sbjct: 338 MIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK--GCEPDVICYTVLINGYCKT 395
Query: 61 GMEEEAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
EEAM+ YN VG+ VK ++L L GK +A KLF MK + P
Sbjct: 396 SKVEEAMKLYNGMLQVGKRPDVKTYG----ALLTGLFQGGKVGDAKKLFGVMK-VYGIPG 450
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L + + + +G C G +A+E+F K+ Y D FN LID LCK G L A
Sbjct: 451 DLYI----YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETA 506
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EL+ ++ + + PD TY +++ +V F+KM +G P+ Y L+
Sbjct: 507 WELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRG 566
Query: 239 LVQVGMLDEAKSFFDIMVKK 258
+ L++ +MV++
Sbjct: 567 FFESKKLEKVVELLHMMVQR 586
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 126/312 (40%), Gaps = 49/312 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G + Y+ L+ GF G + RLF E+
Sbjct: 268 MKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM------------------------ 303
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
N V+ + V N ++D LC GK EA L + M + +
Sbjct: 304 ---------------VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQ-----RGI 343
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL ++N + +G+C G A E+F M C PD + + LI+ CK + EA +
Sbjct: 344 VPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMK 403
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY M G PD TYG L+ F+ +V D F M G+ +L +Y + L
Sbjct: 404 LYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLC 463
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI----LDDGGI 295
+ G L EA F+ + +K+D + ++ L GKL+ E+ + L +
Sbjct: 464 KNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVV 523
Query: 296 EFSEELQEFVKG 307
++ + EF +G
Sbjct: 524 TYNIMIHEFCRG 535
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 9/186 (4%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D Y L+ G + G +LF +K + G+ D +YG + G G EAM
Sbjct: 415 PDVKTYGALLTGLFQGGKVGDAKKLFGVMK--VYGIPGDLYIYGIFLNGLCKNGCLFEAM 472
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E +N+ N +K+ N ++D LC GK + A +LF+++ P + L ++ ++
Sbjct: 473 ELFNKLKSYN--IKLDIECFNCLIDGLCKAGKLETAWELFEKL-----PQEELQPDVVTY 525
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N+M +C G+ A +F+KM + C+PD +++ LI ++ L + EL M
Sbjct: 526 NIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 585
Query: 188 KGVNPD 193
+ V+ D
Sbjct: 586 RDVSLD 591
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 6/188 (3%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
A + F M +P SF +L+ L K ++ LY +M G++PD T +L+
Sbjct: 79 QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
+ VNRV +G ++ G P++ Y L+ L + +A F M K
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198
Query: 262 DDA-SYKFMMKALSDGGKLDEILEIVGGILDDG---GIEFSEELQEF--VKGELSKEGRE 315
+A +Y +MK L G + L++ +L+D GI F + + + L K+ RE
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 316 EEVVKLME 323
+E L E
Sbjct: 259 DEARDLFE 266
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 24/201 (11%)
Query: 95 CNNGKFD--EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
C G +A + F M + P L SF + G + ++ +M
Sbjct: 70 CKTGNITATQAFQFFHLMMYSNPTPP-----LSSFTHLLSGLAKIKHYSQVFYLYNQMRL 124
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVD 211
SPD + N L++ LC + E + + +G PD TY L+ C E +R+
Sbjct: 125 SGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCME-HRIS 183
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG-----------MLDEAKSFFDIMVKKLK 260
A F +M G PN Y L+ L + G ML+++ S + I K +
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDS-SLYGINFKPVV 242
Query: 261 MDDASYKFMMKALSDGGKLDE 281
+ SY ++ AL + DE
Sbjct: 243 I---SYSIIIDALCKDRREDE 260
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 163/357 (45%), Gaps = 48/357 (13%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V+SY L+ G + S L + + + G D V Y +++ G+F +G ++A
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGS 126
Y+E + + + + V +S++ ALC D+A+++ M KN P N +
Sbjct: 220 GTYHEML--DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP------NCRT 271
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + GYC G+ K+AI +KM PD +++N+L+D LCKNG EA +++ M+
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331
Query: 187 DKGVNPDEYTYGLLMD------ACFEVN-----------------------------RVD 211
+G+ P+ TYG L+ A E++ +VD
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
F KM GL P+ Y ++G L + G +++A +F+ M+ ++L + Y ++
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+L K D+ E++ +LD GI + KEGR E KL + R
Sbjct: 452 HSLCIFDKWDKAKELILEMLDR-GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 153/319 (47%), Gaps = 13/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V+S L+ + + G D +F +++++ G+ D V YG+++
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ--GLNPDTVTYGTVIGILCKS 422
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+AM + + + E S + NS++ +LC K+D+A +L M + + +
Sbjct: 423 GRVEDAMRYFEQMIDERLSP--GNIVYNSLIHSLCIFDKWDKAKELILEMLD-----RGI 475
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ FN + D +C +GR ++ ++F M PD ++++ LID C G + EA +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G+ PD TY L++ +++R++D FR+M SG+ P++ YN ++ L
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI-LDDGGIEFS 298
Q AK + I +++ ++Y ++ L DE L + + L D ++
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--LQLE 653
Query: 299 EELQEFVKGELSKEGREEE 317
+ G L K GR +E
Sbjct: 654 TRTFNIMIGALLKVGRNDE 672
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 142/329 (43%), Gaps = 45/329 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + V YS ++ + D + + + GV+ + Y S++ GY
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN--GVMPNCRTYNSIVHGYCSS 282
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + + V+ V NS++D LC NG+ EA K+FD M P+
Sbjct: 283 GQPKEAIGFLKKM--HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE-- 338
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ + GY +G + + M P+ F+ LI K G + +A
Sbjct: 339 ---ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL- 239
++ +M +G+NPD TYG ++ + RV+D YF +M+D L P VYN L+ L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 240 ----------VQVGMLD------------------------EAKSFFDIMVK-KLKMDDA 264
+ + MLD E++ FD+MV+ +K D
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y ++ GK+DE +++ ++ G
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 149/309 (48%), Gaps = 15/309 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+VY+ L+ D L E+ ++ G+ D + + S++ + +G E+ + +
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDR--GICLDTIFFNSIIDSHCKEGRVIESEKLF 502
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ V VK + ++++D C GK DEA KL M + P + ++N +
Sbjct: 503 DLMV--RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP-----DCVTYNTL 555
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+GYC R +DA+ +FR+M SPD +++N ++ L + A A+ELY +++ G
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+ TY +++ + N D+ F+ + + L+ +N ++G L++VG DEAK
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675
Query: 251 FFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV---- 305
F + L D +Y M + L + G L+E+ ++ + ++G S L V
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735
Query: 306 -KGELSKEG 313
+G++++ G
Sbjct: 736 QRGDITRAG 744
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 147/337 (43%), Gaps = 44/337 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G D + ++ ++ ++G +S+ +F L + GV D + Y +L+ GY
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI-----GVKPDIITYSTLIDGY 524
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
+ G +EA + V + +K V N++++ C + ++AL LF M++ P
Sbjct: 525 CLAGKMDEATKLLASMV--SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 118 KRLAVN------------------------------LGSFNVMADGYCGQGRFKDAIEVF 147
+ N L ++N++ G C +A+ +F
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ + +T +FN +I L K G EA++L+ +S G+ PD TY L+ + E
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
+++ F M ++G N + N +V KL+Q G + A ++ ++ +K +AS
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTA 762
Query: 268 FMMKALSDGGKLDEILEIV-GGILDDGGIEFSEELQE 303
+ L GGK E + GGI + + E+QE
Sbjct: 763 SLFLDLLSGGKYQEYHSCIRGGIFS---LCVNSEVQE 796
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 5/207 (2%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G C R DA++ V R+M + C P+ S+N L+ LC EA EL
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187
Query: 185 MSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M D G PD +Y +++ F+ +D + +M+D G+ PN+ Y+ ++ L +
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+D+A MVK M + +Y ++ G+ E + + + D G+E
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD-GVEPDVVT 306
Query: 302 QEFVKGELSKEGREEEVVKLMEKKERE 328
+ L K GR E K+ + +
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKR 333
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V P+ TYG+L+ +C R+D G ++ G R + +
Sbjct: 70 AAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAF 129
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLKM-----DDASYKFMMKALSDGGKLDEILEIVG 287
L+ L +A DI+++++ + SY ++K L D + E LE++
Sbjct: 130 TPLLKGLCADKRTSDA---MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQ 186
Query: 288 GILDDGG------IEFSEELQEFVK-GELSK 311
+ DDGG + ++ + F K G+L K
Sbjct: 187 MMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 164/374 (43%), Gaps = 61/374 (16%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+Y+ ++ G +D + F L+ E+ K G+ + V Y +L+ G+F+ G ++A++ +
Sbjct: 196 VMYNTVIYGMCKDKHVNDAFDLYSEMVSK--GISPNVVTYSALISGFFVVGKLKDAIDLF 253
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN------- 123
N+ + EN +K N ++D C + K E +F M + P + N
Sbjct: 254 NKIILEN--IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYC 311
Query: 124 -----------------------LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
+ S+N++ +G+C + A+ +F +M P+ +
Sbjct: 312 LVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVV 371
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N+LID L K+G ++ A +L +M D+GV P+ TY ++DA F+ ++VD K
Sbjct: 372 TYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKF 431
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLD 280
D G++P++ Y L+ L +V E +DI V +Y M+ G D
Sbjct: 432 KDQGIQPSMYTYTILIDGLCKV----EG---YDITVN-------TYNVMIHGFCKKGLFD 477
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAA 340
E L ++ + D I + E + L++ E +KAE RE
Sbjct: 478 EALSLLSKMKDSSCIP-------------NAVTYEITIRSLLDNNENDKAEKLFREMITR 524
Query: 341 EAAKRSARAAIASL 354
RSA +S+
Sbjct: 525 GLLNRSASYPCSSM 538
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 142/289 (49%), Gaps = 11/289 (3%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
F + ++Y + LG + LF + LG + D V YG+L+ G G
Sbjct: 122 FNCNILIYCFCQLGLIPCQIHQAF--LFHDKLVALGFHL-DQVSYGTLIHGLCKVGETRA 178
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A++ G+ V+++AV N+V+ +C + ++A L+ M + K ++ N+
Sbjct: 179 ALDLLQRVDGK--LVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVS-----KGISPNVV 231
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+++ + G+ G+ KDAI++F K+ PD +FN L+D CK+ + E + ++ M
Sbjct: 232 TYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMM 291
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+G+ PD TY LMD V V+ + F M G+ P++ YN L+ ++ +
Sbjct: 292 MKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKV 351
Query: 246 DEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
D+A + F+ M K + + +Y ++ LS G++ L++V + D G
Sbjct: 352 DKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRG 400
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 70/260 (26%)
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN--LGSF----------- 127
K++ ++ +S +N D+A+ LF+R+ ++ P N LGS
Sbjct: 48 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLS 107
Query: 128 -----------------NVMADGYCGQGRFKDAIE---VFR------------------- 148
N++ +C G I +F
Sbjct: 108 LSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLI 167
Query: 149 ----KMGEYRCSPDTLS-------------FNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
K+GE R + D L +N +I +CK+ + +A +LY EM KG++
Sbjct: 168 HGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGIS 227
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P+ TY L+ F V ++ D F K++ ++P+ +N LV + + E K+
Sbjct: 228 PNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTV 287
Query: 252 FDIMVKK-LKMDDASYKFMM 270
F +M+K+ + D +Y +M
Sbjct: 288 FAMMMKQGIIPDVVTYNSLM 307
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 140/317 (44%), Gaps = 45/317 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D ++ L+ G + L + E G + V Y S++ G G
Sbjct: 130 GYEPDTTTFNTLINGLCLESKVSEAVVLVARMVE--NGCQPNVVTYNSIVNGICKSGDTS 187
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ + + +VK ++++D+LC +G D A+ LF M+ K + +L
Sbjct: 188 LALDLLRKM--DERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET-----KGIKSSL 240
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C G++ D +++ + M + P+ ++FN LID K G L EA ELY E
Sbjct: 241 VTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKE 300
Query: 185 MSDKGVNPDEYTYGLLMDA-CFE----------------------------------VNR 209
M KG++P+ TY LMD C + V R
Sbjct: 301 MITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKR 360
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKF 268
VD+G FRK+ GL N Y+ LV Q G L+ A+ F MV + D +Y
Sbjct: 361 VDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGI 420
Query: 269 MMKALSDGGKLDEILEI 285
++ L D GKL++ LEI
Sbjct: 421 LLDGLCDNGKLEKALEI 437
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 143/282 (50%), Gaps = 19/282 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + + + ++ L+ FV++G L++E+ K G+ + + Y SLM GY M+
Sbjct: 266 MTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITK--GISPNTITYNSLMDGYCMQ 323
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA + V N S + V S++ C + DE +KLF ++ + L
Sbjct: 324 NRLSEANNMLDLMVRNNCSPDI--VTFTSLIKGYCKVKRVDEGMKLFRKISK-----RGL 376
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +++++ G+C G+ + A E+F++M PD +++ L+D LC NG L +A E
Sbjct: 377 VANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALE 436
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ ++ +N D Y ++++ + +V+D F + G++PN+ Y ++ L
Sbjct: 437 IFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 496
Query: 241 QVGMLDEAKSFFDIMVKKLKMD-----DASYKFMMKA-LSDG 276
+ G L EA +I+++K++ D D +Y +++A L DG
Sbjct: 497 KKGSLSEA----NILLRKMEEDGNEPNDCTYNTLIRAHLRDG 534
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 128/280 (45%), Gaps = 18/280 (6%)
Query: 44 VSDG-VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE 102
+SDG V YG ++ + E++A++ + E + S S V + + + +F+
Sbjct: 26 ISDGRVCYGERLRSGIVDIKEDDAIDLFQEMI--RSRPLPSLVDFSRFFSGVASTKQFNL 83
Query: 103 ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
L +M E N +A N+ + N+M + +C + A V K+ + PDT +F
Sbjct: 84 VLDFCKKM--ELNG---IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF 138
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
N LI+ LC ++EA L M + G P+ TY +++ + RKM +
Sbjct: 139 NTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDE 198
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
++ ++ Y+ ++ L + G +D A S F M K +K +Y ++ L GK ++
Sbjct: 199 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWND 258
Query: 282 ILEIVGGI----LDDGGIEFSEELQEFVKGELSKEGREEE 317
++++ + + I F+ + FV KEG+ +E
Sbjct: 259 GVQLLKDMTSRKIIPNVITFNVLIDVFV-----KEGKLQE 293
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 149/326 (45%), Gaps = 17/326 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M D V ++ ++ + G D + + + E G V+D V Y S++ G
Sbjct: 382 MTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEH--GCVADIVTYSSILDGLCDV 439
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+E + ++ K +A +VL LC+ +++ A +L M PP +
Sbjct: 440 GRVDDAVELLSRL--KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEV 497
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+FN + C +G AI V +M E CSPD +++N +ID LC + +A E
Sbjct: 498 -----TFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAME 552
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L ++ G PD T+ L+ V+R +D M+ S P+ +N ++ L
Sbjct: 553 LLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLC 612
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDAS-YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
Q G+L +A IM + + ++S Y ++ AL GK LE++ G+ + +
Sbjct: 613 QKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG-----TP 667
Query: 300 ELQEF--VKGELSKEGREEEVVKLME 323
+L + V L+K G+ EE + L+
Sbjct: 668 DLITYNTVISNLTKAGKMEEALDLLR 693
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 10/274 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V Y+ L+ +GD D + L G D V Y ++K
Sbjct: 312 MRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSH--GCKPDAVTYTPVLKSLCGS 369
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+E E E N + V N+++ +LC G D A+++ D M +EH
Sbjct: 370 ERWKEVEELLAEMTSNNCAPD--EVTFNTIVTSLCQQGLVDRAIEVVDHM-SEHG----C 422
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + DG C GR DA+E+ ++ Y C PDT+++ ++ LC AEE
Sbjct: 423 VADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEE 482
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM PDE T+ ++ + + VD +M ++G P++ YN ++ L
Sbjct: 483 LMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLC 542
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKAL 273
+D+A D+ K D ++ ++K L
Sbjct: 543 NESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGL 576
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 131/307 (42%), Gaps = 15/307 (4%)
Query: 19 GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENS 78
V+ G+ D LF+ + G V L+K G +A + A+G ++
Sbjct: 159 SLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVF-AALGPSA 217
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQG 138
+V V N++++ C G+ ++A +L + M PP +FN + C +G
Sbjct: 218 TV----VTYNTMVNGYCRAGRIEDARRLINGMPF---PPDTF-----TFNPLIRALCVRG 265
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
R DA+ VF M CSP ++++ L+D CK +A L EM KG PD TY
Sbjct: 266 RIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYN 325
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK- 257
+L++A VD+ + G +P+ Y ++ L E + M
Sbjct: 326 VLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSN 385
Query: 258 KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
D+ ++ ++ +L G +D +E+V + + G + + G L GR ++
Sbjct: 386 NCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDG-LCDVGRVDD 444
Query: 318 VVKLMEK 324
V+L+ +
Sbjct: 445 AVELLSR 451
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 12/235 (5%)
Query: 54 MKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE 113
++ +G +EA+ ++ V N ++ LC++G+ +A ++F +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALG-- 214
Query: 114 HNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
P V ++N M +GYC GR +DA + M PDT +FN LI LC G
Sbjct: 215 ---PSATVV---TYNTMVNGYCRAGRIEDARRLINGMPF---PPDTFTFNPLIRALCVRG 265
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
+ +A ++ +M +G +P TY +L+DA + + +M G P++ YN
Sbjct: 266 RIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYN 325
Query: 234 RLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
L+ + G +DEA + ++ K D +Y ++K+L + E+ E++
Sbjct: 326 VLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLA 380
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 116/320 (36%), Gaps = 77/320 (24%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M D V ++ ++ + G D R+ E++ E G D V Y ++ G +
Sbjct: 487 MLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSEN--GCSPDIVTYNCIIDGLCNE 544
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++AME ++ ++ K V N++L LC ++++A +L M + PP L
Sbjct: 545 SCIDDAMELLSDL--QSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDEL 602
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC------------------------- 155
+FN + C +G AIE + M E C
Sbjct: 603 -----TFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALE 657
Query: 156 --------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY---------- 197
+PD +++N +I L K G + EA +L M G+ PD TY
Sbjct: 658 LLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCRE 717
Query: 198 ----------------GLLMDACF---------EVNRVDDGATYFRKMVDSGLRPNLAVY 232
GL D F R D F MV SG P+ + Y
Sbjct: 718 DGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTY 777
Query: 233 NRLVGKLVQVGMLDEAKSFF 252
L+ L G+LDEAK
Sbjct: 778 VILLEALAYGGLLDEAKRLL 797
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 152/324 (46%), Gaps = 11/324 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ GF ++GDSD + + E+ ++ G++ D V Y S++ +
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDR--GILPDVVTYSSIIAALCKAQAMD 253
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+AME N V + V + NS+L C++G+ EA+ +M+++ P N+
Sbjct: 254 KAMEVLNTMV--KNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEP-----NV 306
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + + C GR +A ++F M + PD ++ L+ G L E L
Sbjct: 307 VTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDL 366
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G+ PD + + +L+ A + +VD F KM GL PN+ Y ++ L + G
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+D+A +F+ M+ + L + Y ++ L K D+ E++ +LD GI +
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR-GICLNTIFFN 485
Query: 304 FVKGELSKEGREEEVVKLMEKKER 327
+ KEGR E KL + R
Sbjct: 486 SIIDSHCKEGRVIESEKLFDLMVR 509
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 151/319 (47%), Gaps = 13/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V++ L+ + + D +F ++++ G+ + V YG+++
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQH--GLNPNVVCYGTVIDVLCKS 424
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++AM + + + E + + + S++ LC K+D+A +L M + + +
Sbjct: 425 GSVDDAMLYFEQMIDEGLTPNI--IVYTSLIHGLCTCDKWDKAEELILEMLD-----RGI 477
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N FN + D +C +GR ++ ++F M PD +++N LID C G + EA +
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATK 537
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M GV PD TYG L++ V+R+DD F++MV SG+ PN+ YN ++ L
Sbjct: 538 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 597
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI-LDDGGIEFS 298
AK + + K +++ ++Y ++ L DE L + + L D ++
Sbjct: 598 HTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--LQLE 655
Query: 299 EELQEFVKGELSKEGREEE 317
+ G L K GR +E
Sbjct: 656 TRTFNIMIGALLKCGRMDE 674
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 150/319 (47%), Gaps = 15/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + +VY+ L+ G D L E+ ++ G+ + + + S++ + +
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR--GICLNTIFFNSIIDSHCKE 494
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+ + ++ V VK + N+++D C GK DEA KL M + P
Sbjct: 495 GRVIESEKLFDLMV--RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP--- 549
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + +GYC R DA+ +F++M SP+ +++N ++ L A A+E
Sbjct: 550 --DIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 607
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY ++ G + TY +++ + N D+ F+ + + L+ +N ++G L+
Sbjct: 608 LYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 667
Query: 241 QVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G +DEAK F L D +Y M + L + G L+E+ ++ + ++G S
Sbjct: 668 KCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSR 727
Query: 300 ELQEFV-----KGELSKEG 313
L V +G++++ G
Sbjct: 728 MLNSIVRKLLQRGDITRAG 746
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 9/227 (3%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G C R DA++ V R+M E C PD S+NNL+ LC EA EL
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188
Query: 185 MSDK---GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M+D G PD +Y +++ F+ D + + +M+D G+ P++ Y+ ++ L +
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248
Query: 242 VGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+D+A + MVK M D +Y ++ G+ E + + + D G+E +
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD-GVEPNVV 307
Query: 301 LQEFVKGELSKEGREEEVVKL---MEKKEREKAEAKAREAEAAEAAK 344
+ L K GR E K+ M K+ E A R A K
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATK 354
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 126/273 (46%), Gaps = 10/273 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + Y+ L+ G G D +L + GV D V YG+L+ GY
Sbjct: 507 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV--GVKPDIVTYGTLINGYCRV 564
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A+ + E V +S V + + N +L L + + A +L+ +
Sbjct: 565 SRMDDALALFKEMV--SSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGT----- 617
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ L ++N++ G C +A+ +F+ + +T +FN +I L K G + EA++
Sbjct: 618 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKD 677
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ S G+ PD TY L+ + E +++ F M ++G + + N +V KL+
Sbjct: 678 LFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 737
Query: 241 QVGMLDEAKSF-FDIMVKKLKMDDASYKFMMKA 272
Q G + A ++ F I K ++ ++ F++++
Sbjct: 738 QRGDITRAGTYLFMIDEKHFSLEASTASFLLES 770
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 11/127 (8%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V P +TY +L+ C R+D G +V G R + +
Sbjct: 71 AAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITF 130
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASYKFMMKALSDGGKLDEILEIVG 287
L+ L +A DI+++++ D SY ++K L D + E LE++
Sbjct: 131 TPLLKGLCADKRTSDA---MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLH 187
Query: 288 GILDDGG 294
+ DD G
Sbjct: 188 MMADDRG 194
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 143/279 (51%), Gaps = 10/279 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D YS L+ G ++G D +LF+E++++ G+ +G+ + +L+ G + + AM
Sbjct: 291 PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR--GLRPNGITFTALIDGQYRSRRMDSAM 348
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
Y++ + VK V N++L+ LC G ++A KL D MK P ++ ++
Sbjct: 349 NTYHQML--TMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKI-----TY 401
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ DGYC +G + A+E+ + M E D ++F LI C++G + +AE EM +
Sbjct: 402 TTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVE 461
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G+ PD+ TY +++D + V G ++M +G +P + YN L+ L + G +
Sbjct: 462 AGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKN 521
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
A + M+ + DD +Y +++ GK +++L++
Sbjct: 522 ANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 148/334 (44%), Gaps = 44/334 (13%)
Query: 41 GGVVSDGVVYGSLMKGYFMKGMEEEAMECY-------------------NEAVGENSSVK 81
G V+ +LM Y+ G +A++C+ ++ + NS V
Sbjct: 147 AGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVT 206
Query: 82 MSAVAN--------------NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + N +++ C G +A +F+ ++ P + SF
Sbjct: 207 IWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTV-----SF 261
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + +G C + + + M E R PD +++ LI LCK G L AE+L+ EM
Sbjct: 262 NTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ 321
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G+ P+ T+ L+D + R+D + +M+ G++P+L +YN L+ L +VG +++
Sbjct: 322 RGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNK 381
Query: 248 AKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A+ D M + +K D +Y ++ G L+ +EI G+ ++G + + +
Sbjct: 382 ARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALIS 441
Query: 307 GELSKEGREEEVVKLMEKKEREKAEAKAREAEAA 340
G ++GR V+ E+ RE EA + +A
Sbjct: 442 G-FCRDGR----VRDAERTLREMVEAGMKPDDAT 470
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 12/236 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V+Y+ L+ G + GD + +L +E+ K+ G+ D + Y +L+ GY +
Sbjct: 354 MLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM--KMVGMKPDKITYTTLIDGYCKE 411
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E AME + + E V + VA +++ C +G+ +A + M P
Sbjct: 412 GDLESAMEI-RKGMNEEGVV-LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDD- 468
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ DGYC +G K ++ ++M P +++N L++ LCK G + A
Sbjct: 469 ----ATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANM 524
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
L M + GV PD+ TY +L++ + + +D + + GL + A Y LV
Sbjct: 525 LLEAMLNLGVTPDDITYNILLEGHCKNGKAED---LLKLRNEKGLIVDYAYYTSLV 577
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 142/317 (44%), Gaps = 45/317 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D ++ L+ G + L +++ ++ G D V YG+++ G +G +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR--GCQPDLVTYGTVVNGLCKRGDID 240
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ N+ E + +K + V N+++D+LC + A+ LF M+ + P N+
Sbjct: 241 LALNLLNKM--EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP-----NV 293
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + + C GR+ DA + M E + +P+ ++FN LID K G L EAE+L+ E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 185 MSDKGVNPDEYTYGLLMDA---------------------CF--------------EVNR 209
M + ++PD TY LL++ C + R
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKF 268
V+DG FR+M GL N Y ++ Q G D A+ F MV ++ D +Y
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 269 MMKALSDGGKLDEILEI 285
++ L GKLD L I
Sbjct: 474 LLHGLCSYGKLDTALVI 490
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 141/316 (44%), Gaps = 35/316 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y ++ G + GD D L +++ + ++ V++ +++
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA--ARIKANVVIFNTIIDSLCKY 271
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E A++ + E E ++ + V NS+++ LCN G++ +A +L M + P +
Sbjct: 272 RHVEVAVDLFTEM--ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 121 AVN------------------------------LGSFNVMADGYCGQGRFKDAIEVFRKM 150
N ++N++ +G+C R +A ++F+ M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
C P+ ++N LI+ CK + + EL+ EMS +G+ + TY ++ F+
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFM 269
D F++MV + + ++ Y+ L+ L G LD A F + K +++++ Y M
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 270 MKALSDGGKLDEILEI 285
++ + GK+ E ++
Sbjct: 510 IEGMCKAGKVGEAWDL 525
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 145/325 (44%), Gaps = 13/325 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ L+ G RL + EK + + V + +L+ +F +
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK--KINPNVVTFNALIDAFFKE 341
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + + E + S+ + N +++ C + + DEA ++F M ++ P
Sbjct: 342 GKLVEAEKLHEEMI--QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP--- 396
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N + +G+C R +D +E+FR+M + +T+++ +I + G A+
Sbjct: 397 --NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M V D TY +L+ ++D F+ + S + N+ +YN ++ +
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+ G + EA F + +K D +Y M+ L L E ++ + +DG + S
Sbjct: 515 KAGKVGEAWDLFCSL--SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Query: 301 LQEFVKGELSKEGR--EEEVVKLME 323
++ L R E++K M
Sbjct: 573 YNTLIRANLRDCDRAASAELIKEMR 597
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 15/238 (6%)
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
++ C + AL + +M P ++ + + + +GYC R DA+ + +M
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEP-----DIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E PDT +F LI L + +EA L +M +G PD TYG +++ + +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFM 269
D KM + ++ N+ ++N ++ L + ++ A F M K ++ + +Y +
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 270 MKALSDGGKLDEILEIVGGIL----DDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+ L + G+ + ++ +L + + F+ + F KEG+ E KL E
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF-----KEGKLVEAEKLHE 352
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 86/173 (49%), Gaps = 5/173 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S V N +L A+ KF+ + L ++M+ ++ +L ++++ + +C + +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLG-----ISHDLYTYSIFINCFCRRSQLSL 136
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ V KM + PD ++ ++L++ C + +++A L +M + G PD +T+ L+
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
F N+ + +MV G +P+L Y +V L + G +D A + + M
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM 249
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V + V Y+ ++ GF + GD D +F+++ V +D + Y L+ G G
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS--NRVPTDIMTYSILLHGLCSYGKL 484
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A+ + + S ++++ N++++ +C GK EA LF + + +
Sbjct: 485 DTALVIFKYL--QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS--------IKPD 534
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N M G C + ++A ++FRKM E P++ ++N LI ++ A + EL
Sbjct: 535 VVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIK 594
Query: 184 EMSDKGVNPDEYTYGLLMD 202
EM G D T L+ +
Sbjct: 595 EMRSSGFVGDASTISLVTN 613
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 6/189 (3%)
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
K D+A+ LF M P ++ FN + +F+ I + +M S D
Sbjct: 63 KVDDAVDLFGDMVKSRPFP-----SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
+++ I+ C+ L+ A + +M G PD T L++ R+ D
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
+MV+ G +P+ + L+ L EA + D MV++ + D +Y ++ L G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 278 KLDEILEIV 286
+D L ++
Sbjct: 238 DIDLALNLL 246
>gi|255661016|gb|ACU25677.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 367
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 11/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ + G +G D V ++E +KE G V D + YG L+ G+ G +++
Sbjct: 62 FNIMXRGLFBNGKVDEVISIWELMKES--GYVEDSITYGILVHGFCKNGYLNKSIHVLE- 118
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGSFNVMA 131
+ E + A A +++++ LC K D+A+ + + M KN P N +N +
Sbjct: 119 -IAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKP------NAHVYNALI 171
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
+G G +F+DAI V R+MG SP ++++ JI+ LCK EA +L EM DKG+N
Sbjct: 172 NGLVGASKFEDAIRVLREMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEMLDKGLN 231
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P TY LL+ +VD + +++ G +P++ ++N ++ L VG + A S
Sbjct: 232 PSVITYSLLIKGLCLDRKVDKALQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQLALSL 291
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ + + ++ +M+ G + L I IL +G
Sbjct: 292 YYMNRWDCAPNLVTHNTLMEGFYKDGDVRNALVIWARILRNG 333
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 128/284 (45%), Gaps = 22/284 (7%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+++E+ E V D VVY +++ GYF G ++ E + E +G S +S
Sbjct: 4 GDIDGAERVYKEIVES--KVSPDAVVYNAMLNGYFRVGRIKDCFELW-ELMGREGSRSVS 60
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ N + L BNGK DE + +++ MK + ++ ++ G+C G +
Sbjct: 61 SF--NIMXRGLFBNGKVDEVISIWELMKESGYVEDSI-----TYGILVHGFCKNGYLNKS 113
Query: 144 IEVF----RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
I V RK G D +++ +I+ LCK L +A + M G P+ + Y
Sbjct: 114 IHVLEIAERKGGVL----DAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKPNAHVYNA 169
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
L++ ++ +D R+M P + Y+ J+ L + EA M+ K
Sbjct: 170 LINGLVGASKFEDAIRVLREMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEMLDKG 229
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L +Y ++K L K+D+ L++ ++ G F ++Q
Sbjct: 230 LNPSVITYSLLIKGLCLDRKVDKALQLWNQVISKG---FKPDVQ 270
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+V D + Y L+ GF ++G + + E + E+ GGV+ D Y +++ G + +
Sbjct: 89 GYVEDSITYGILVHGFCKNGYLNKSIHVLE-IAERKGGVL-DAFAYSAMINGLCKEAKLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ N + + K +A N++++ L KF++A+++ M H P +
Sbjct: 147 KAVSVLNGMI--KNGCKPNAHVYNALINGLVGASKFEDAIRVLREMGTXHFSPTVV---- 200
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + +G C RF +A ++ ++M + +P ++++ LI LC + + +A +L+ +
Sbjct: 201 -TYSXJINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSLLIKGLCLDRKVDKALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMD------------ACFEVNRVD--------------------- 211
+ KG PD + +++ + + +NR D
Sbjct: 260 VISKGFKPDVQMHNIMIHGLCSVGKMQLALSLYYMNRWDCAPNLVTHNTLMEGFYKDGDV 319
Query: 212 -DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+ + +++ +GL+P++ YN + L + A F V K
Sbjct: 320 RNALVIWARILRNGLQPDIISYNITLKGLCSCNRISGAILFLQDAVSK 367
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS 265
E+ +D ++++V+S + P+ VYN ++ +VG + + +++M ++ +S
Sbjct: 2 EIGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVGRIKDCFELWELMGREGSRSVSS 61
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKK 325
+ M + L B GK+DE++ I + + G +E S V G K G + + ++E
Sbjct: 62 FNIMXRGLFBNGKVDEVISIWELMKESGYVEDSITYGILVHG-FCKNGYLNKSIHVLEIA 120
Query: 326 ERE 328
ER+
Sbjct: 121 ERK 123
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + G + + EL+ M +G +
Sbjct: 1 CEIGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVGRIKDCFELWELMGREG-SRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++ F+ +VD+ + + M +SG + Y LV + G L+++ +I
Sbjct: 60 SSFNIMXRGLFBNGKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSIHVLEI 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L KLD+ + ++ G++ +G
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNG 159
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 155/328 (47%), Gaps = 11/328 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D V ++ L+ G + L +++ ++ G D V YG+++ G +G +
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQR--GCQPDLVTYGAVVNGLCKRGDID 237
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ + E ++ V N+++D LC D+A LF++M+ + P ++
Sbjct: 238 LALSLLKKM--EKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRP-----DV 290
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + C GR+ DA + M E + +P+ ++F+ LID K G L EAE+LY E
Sbjct: 291 FTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + ++PD +TY L++ +R+D+ F M+ PN+ YN L+ +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
++E F M ++ L + +Y +++ L G D +I ++ DG
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 304 FVKGELSKEGREEEVVKLMEKKEREKAE 331
+ G L K G+ E+ + + E ++ K E
Sbjct: 471 LLDG-LCKYGKLEKALVVFEYLQKSKME 497
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 134/270 (49%), Gaps = 11/270 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V +S L+ FV++G +L++E+ ++ + D Y SL+ G+ M +EA +
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ ++ + V N+++ C + +E ++LF M + L N ++N +
Sbjct: 384 ELMISKDCFP--NVVTYNTLIKGFCKAKRVEEGMELFREMSQ-----RGLVGNTVTYNTL 436
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G G A ++F+KM PD ++++ L+D LCK G L +A ++ + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD YTY ++++ + +V+DG F + G++PN+ +Y ++ + G+ +EA +
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 251 FFDIMVKKLKMDDA-SYKFMMKA-LSDGGK 278
F M + + D+ Y +++A L DG K
Sbjct: 557 LFREMKEDGTLPDSGCYNTLIRARLRDGDK 586
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 8/241 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D V SL+ GY +A+ ++ V K V N+++ L + K
Sbjct: 145 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV--EMGYKPDTVTFNTLIHGLFLHNKAS 202
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EA+ L D+M P +L ++ + +G C +G A+ + +KM + + D +
Sbjct: 203 EAVALVDQMVQRGCQP-----DLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+N +ID LCK + +A L+ +M KG+ PD +TY L+ R D + M+
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
+ + PN+ ++ L+ V+ G L EA+ +D M+K+ + D +Y ++ +LD
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 281 E 281
E
Sbjct: 378 E 378
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S V N +L A+ KFD + L +RM+N R++ +L S+N++ + +C + +
Sbjct: 79 SIVEFNKLLSAIAKMKKFDLVISLGERMQN-----LRISYDLYSYNILINCFCRRSQLPL 133
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ V KM + PD ++ ++L++ C + +++A L +M + G PD T+ L+
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIH 193
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKM 261
F N+ + +MV G +P+L Y +V L + G +D A S M K K++
Sbjct: 194 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 262 DDASYKFMMKALSDGGKLDE 281
D Y ++ L +D+
Sbjct: 254 DVVIYNTIIDGLCKYKHIDD 273
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V + V Y+ L+ G + GD D ++F+++ GV D + Y L+ G G
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD--GVPPDIITYSILLDGLCKYGKL 481
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A+ + + S ++ N +++ +C GK ++ LF + + P N
Sbjct: 482 EKALVVFEYL--QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP-----N 534
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + M G+C +G ++A +FR+M E PD+ +N LI ++G A + EL
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIK 594
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
EM G D T ++ +N + DG
Sbjct: 595 EMRSCGFVGDASTISMV------INMLHDG 618
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 2/195 (1%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ DAI +F +M + R P + FN L+ + K L M + ++ D Y+Y
Sbjct: 60 KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+L++ +++ KM+ G P++ + L+ + +A + D MV+
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 259 -LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
K D ++ ++ L K E + +V ++ G V G L K G +
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNG-LCKRGDIDL 238
Query: 318 VVKLMEKKEREKAEA 332
+ L++K E+ K EA
Sbjct: 239 ALSLLKKMEKGKIEA 253
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 140/282 (49%), Gaps = 16/282 (5%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
+ + YS ++ G + G D LF+E+K GV+ D + Y SL+ G+ G ++A
Sbjct: 638 NAISYSIIIDGLCKCGREDEARELFKEMKAL--GVIPDVISYTSLIHGFCRSGKWKDAKY 695
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+NE V + V+ + ++D LC GK EA +L + M P N ++
Sbjct: 696 LFNEMV--DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP-----NTVTYT 748
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM-SD 187
+ G C R +A ++F KM + C PD +++ L+ LC+ G + A EL+ +M SD
Sbjct: 749 TLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSD 808
Query: 188 KG-----VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
G PD +Y +++D + R D+ F++M G+ PN+ Y L+ +
Sbjct: 809 TGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRS 868
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
G L++AK F+ MV + ++++ +Y M+ G++D+ L
Sbjct: 869 GKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 135/293 (46%), Gaps = 18/293 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + D V + L+ G +LF LK + G + + V +LMKG G
Sbjct: 557 RGCILDVVTCTTLVKGLCMKHRISKATQLF--LKMQKLGCMPNVVTCATLMKGLCQSGNI 614
Query: 64 EEAMECYNEAVGENS----SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+ A+E + + + S + K +A++ + ++D LC G+ DEA +LF MK P
Sbjct: 615 KIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP-- 672
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ S+ + G+C G++KDA +F +M + PD +F+ LID LCK G + EA
Sbjct: 673 ---DVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEAN 729
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL M +G P+ TY L+ +R+ + F KM G P++ Y L+ L
Sbjct: 730 ELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGL 789
Query: 240 VQVGMLDEAKSFFDIMV-------KKLKMDDASYKFMMKALSDGGKLDEILEI 285
Q G + A M+ K D SY ++ L G+ DE E+
Sbjct: 790 CQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEAREL 842
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 145/320 (45%), Gaps = 11/320 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D S L+ + G +L E + ++ G + D V +L+KG MK
Sbjct: 523 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQR--GCILDVVTCTTLVKGLCMKHRIS 580
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP-PKRLAVN 123
+A + + + + + V +++ LC +G AL+L M ++ +P N
Sbjct: 581 KATQLFLKM--QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 638
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S++++ DG C GR +A E+F++M PD +S+ +LI C++G +A+ L+
Sbjct: 639 AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFN 698
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM D GV PD T+ +L+D + +V + M+ G PN Y LV L
Sbjct: 699 EMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMND 758
Query: 244 MLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDG---GIEFSE 299
+ EA F M K + D +Y +MK L G + LE+ +L D G F
Sbjct: 759 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 818
Query: 300 ELQEF--VKGELSKEGREEE 317
++ + + L K GRE+E
Sbjct: 819 DVISYSIIIDGLCKHGREDE 838
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 139/301 (46%), Gaps = 17/301 (5%)
Query: 4 KGFVADPVVYSY---------LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLM 54
+G++ D V YS L+ ++G L E + ++ G + D V Y +L+
Sbjct: 39 RGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQR--GCILDIVTYSTLI 96
Query: 55 KGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH 114
KG M+ EA + + + A+ +++ LC G + AL+L M N+
Sbjct: 97 KGLCMEHRISEATWLFMSM--QKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 154
Query: 115 NP-PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
+ L S++++ DG C R +A E+F++M PD +S+ +LI C +G
Sbjct: 155 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSG 214
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
+A+ L+ EM D G+ PD T G+L+D + +V + MV G ++ Y+
Sbjct: 215 KWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYS 274
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKKL--KMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
L+ L + EA F M KKL + D +Y +MK L GK++ L + +L+
Sbjct: 275 TLIKGLCMKHRISEATQLFMSM-KKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLN 333
Query: 292 D 292
D
Sbjct: 334 D 334
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 138/316 (43%), Gaps = 44/316 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + D V YS L+ G +LF +K+ G D + YG+LMKG
Sbjct: 261 MVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL--GCRPDAIAYGTLMKGLCQT 318
Query: 61 GMEEEAMECYNEAVGENS-----SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN--- 112
G A+ + E + + S ++ ++ ++D LC GK EA +L + M
Sbjct: 319 GKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGC 378
Query: 113 ----------------EHNPPKRLAV-----NLG------SFNVMADGYCGQGRFKDAIE 145
EH + + LG ++ + G C G A++
Sbjct: 379 ILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQ 438
Query: 146 VFRKM----GEY--RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+ ++M G Y +C P +S++ +ID LCK+ EA EL+ EM +G+ PD +Y
Sbjct: 439 LHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTT 498
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
L+ + + F +M+D G++P++ + L+ L + G + EA ++++++
Sbjct: 499 LIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG 558
Query: 259 LKMDDASYKFMMKALS 274
+D + ++K L
Sbjct: 559 CILDVVTCTTLVKGLC 574
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 156/365 (42%), Gaps = 45/365 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE------------------KLG- 41
M +G + D + Y+ L+ GF G + LF E+ + K G
Sbjct: 191 MKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGK 250
Query: 42 --------------GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
G + D V Y +L+KG MK EA + + + + A+A
Sbjct: 251 VIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSM--KKLGCRPDAIAY 308
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNP--PKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
+++ LC GK + AL L M N+ + K + ++ + +++ D C +G+ +A E
Sbjct: 309 GTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANE 368
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+ M + C D ++++ LI LC ++EA L+ M G PD TYG LM
Sbjct: 369 LLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLC 428
Query: 206 EVNRVDDGATYFRKMV-DSG-----LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKL 259
+ ++ ++M+ D+G +P L Y+ ++ L + DEA+ F+ M +
Sbjct: 429 QTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQG 488
Query: 260 KMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
M D SY ++ GK ++ + +LD GI+ + L K+G+ E
Sbjct: 489 IMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV-GIQPDVTTSSVLIDMLCKKGKVIEA 547
Query: 319 VKLME 323
KL+E
Sbjct: 548 NKLLE 552
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 136/322 (42%), Gaps = 11/322 (3%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+K D S L+ ++G L E + ++ G + D V Y +L+KG M+
Sbjct: 340 IKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQR--GCILDIVTYSTLIKGLCMEHR 397
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP-PKRLA 121
EA + + + A+ +++ LC G + AL+L M N+ +
Sbjct: 398 ISEATWLFMSM--QKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCK 455
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
L S++++ DG C R +A E+F +M PD +S+ LI C +G +A+ L
Sbjct: 456 PTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 515
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ EM D G+ PD T +L+D + +V + ++ G ++ LV L
Sbjct: 516 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCM 575
Query: 242 VGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDG---GIEF 297
+ +A F M K M + + +MK L G + LE+ +L D GI
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635
Query: 298 SEELQEF--VKGELSKEGREEE 317
+ + L K GRE+E
Sbjct: 636 KPNAISYSIIIDGLCKCGREDE 657
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 15/176 (8%)
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL---------LMDACFEV 207
PD+ +FN LI+ LC + E + +G PD TY + L+D +
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+V + M+ G ++ Y+ L+ L + EA F M K + D +Y
Sbjct: 68 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDG---GIEFSEELQEF--VKGELSKEGREEE 317
+MK L G ++ L++ +L+D GI+ L + + L K+ RE+E
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDE 183
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGAT---------YFRKMVDSGLRPNLAVYNRL 235
M G+ PD +T+ +L++ V RV++G Y +V +RP++ + L
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ L + G + EA ++M+++ +D +Y ++K L ++ E
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 107
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 133/284 (46%), Gaps = 14/284 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G AD V Y+ LM G + G +L E +K G D V Y S + G
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS--GCAPDVVAYSSFVYGLCKS 235
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + + +S + V N++LD LC +GK D AL++ ++M +
Sbjct: 236 GKVLDAHQVLEQM--RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDG----C 289
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N+ ++ + DG C GR ++A V M C PD +++++L++ LCK G + EA E
Sbjct: 290 GLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVE 349
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM-----VDSGLRPNLAVYNRL 235
EM+ +G P+ TY L+ R+ + +M P+++ YN L
Sbjct: 350 AVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNAL 409
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
+G L + G +D+A FF M + D SY +++ L+ G+
Sbjct: 410 IGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 137/330 (41%), Gaps = 12/330 (3%)
Query: 9 DPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
P V SY L+ G + L ++ + G D V Y +L+ GY G EE+
Sbjct: 42 QPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEES 101
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
E E + + ++ A+ V+ +LC + + EAL+L + M P L +
Sbjct: 102 RELLKEVI--SRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCP-----TLIT 154
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
FN + G C + + A + +KM D +++N L+D LCK G L EAE+L M
Sbjct: 155 FNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK 214
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G PD Y + + +V D +M DS PN+ YN ++ L + G +D
Sbjct: 215 ASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKID 274
Query: 247 EAKSFFDIMVKK--LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
A + M ++ Y ++ L G+ E ++ + G
Sbjct: 275 TALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSL 334
Query: 305 VKGELSKEGREEEVVKLMEKKEREKAEAKA 334
V G L K G+ EE V+ + + E + A
Sbjct: 335 VNG-LCKAGKIEEAVEAVREMAMEGCKPNA 363
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 4/175 (2%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V YS ++ G + G + + E + G D V Y SL+ G G EEA+E
Sbjct: 294 VGYSTVVDGLCKLGRTQEARSVMEAMAR--AGCRPDVVTYSSLVNGLCKAGKIEEAVEAV 351
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E E K +AV S++ LC+ G+ EA ++ + M + ++ ++N +
Sbjct: 352 REMAMEG--CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNAL 409
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
G C GR DA++ F++M C PD +S++ +++ L ++G +AE + E+
Sbjct: 410 IGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 133/322 (41%), Gaps = 41/322 (12%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G + V + +L+ G+ +G + + ++ + V+ N +L+ LC ++
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARD--IQPNVVSYNGLLEGLCKLERWH 62
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EA +L M + R ++ +++ + GYC G+ +++ E+ +++ PD L
Sbjct: 63 EAEELVRDMISRGG---RSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ ++ LCK+ L EA EL EM G P T+ L+ C ++ + +KM
Sbjct: 120 YTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA 179
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-------------------VKKLKMD 262
SG++ ++ YN L+ L + G L EA+ + M K K+
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239
Query: 263 DA-----------------SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
DA +Y ++ L GK+D LE++ + G + V
Sbjct: 240 DAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299
Query: 306 KGELSKEGREEEVVKLMEKKER 327
L K GR +E +ME R
Sbjct: 300 VDGLCKLGRTQEARSVMEAMAR 321
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 154/332 (46%), Gaps = 11/332 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MFV + + V ++ L+ G + L + + + G D YG+++ G +
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR--GCQPDLFTYGTVVNGLCKR 233
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+ + E ++ V +++DALCN ++AL LF M N+ P
Sbjct: 234 GDIDLALSLLKKM--EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP--- 288
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N + C GR+ DA + M E + +P+ ++F+ LID K G L EAE+
Sbjct: 289 --NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY EM + ++PD +TY L++ +R+D+ F M+ PN+ YN L+
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ ++E F M ++ L + +Y +++ L G D +I ++ DG
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAE 331
+ G L K G+ E+ + + E ++ K E
Sbjct: 467 TYSILLDG-LCKYGKLEKALVVFEYLQKSKME 497
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 135/270 (50%), Gaps = 11/270 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V +S L+ FV++G +L++E+ ++ + D Y SL+ G+ M +EA +
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ ++ + V N+++ C + +E ++LF M + L N ++N +
Sbjct: 384 ELMISKDCFP--NVVTYNTLIKGFCKAKRVEEGMELFREMSQ-----RGLVGNTVTYNTL 436
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G G A ++F+KM PD ++++ L+D LCK G L +A ++ + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD YTY ++++ + +V+DG F + G++PN+ +Y ++ + G+ +EA +
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 251 FFDIMVKKLKMDDA-SYKFMMKA-LSDGGK 278
F M + + ++ +Y +++A L DG K
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 9/260 (3%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A++ + E V S S V N +L A+ KFD + L +RM+N R++ +
Sbjct: 62 DDAVDLFGEMV--QSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN-----LRISYD 114
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L S+N++ + +C + + A+ V KM + PD ++ ++L++ C ++EA L
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M P+ T+ L+ F N+ + +MV G +P+L Y +V L + G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 244 MLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+D A S M K K++ D Y ++ AL + +++ L + +D+ GI +
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE-MDNKGIRPNVVTY 293
Query: 303 EFVKGELSKEGREEEVVKLM 322
+ L GR + +L+
Sbjct: 294 NSLIRCLCNYGRWSDASRLL 313
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 97/242 (40%), Gaps = 41/242 (16%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
+N + + N +++ C + AL + +M P ++ + + + +GYC
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEP-----DIVTLSSLLNGYC 161
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
R +A+ + +M P+T++FN LI L + +EA L M +G PD +
Sbjct: 162 HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF 221
Query: 196 TYG-----------------------------------LLMDACFEVNRVDDGATYFRKM 220
TYG ++DA V+D F +M
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
+ G+RPN+ YN L+ L G +A D++ +K+ + ++ ++ A GKL
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 280 DE 281
E
Sbjct: 342 VE 343
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V + V Y+ L+ G + GD D ++F+++ GV D + Y L+ G G
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD--GVPPDIITYSILLDGLCKYGKL 481
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A+ + + S ++ N +++ +C GK ++ LF + + P N
Sbjct: 482 EKALVVFEYL--QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP-----N 534
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + M G+C +G ++A +FR+M E P++ ++N LI ++G A + EL
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 594
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
EM G D T ++ +N + DG
Sbjct: 595 EMRSCGFVGDASTISMV------INMLHDG 618
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ DA+++F +M + R P + FN L+ + K L M + ++ D Y+Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VK 257
+L++ +++ KM+ G P++ + L+ + EA + D M V
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 258 KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+ + + ++ ++ L K E + ++ ++ G V G L K G +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG-LCKRGDIDL 238
Query: 318 VVKLMEKKEREKAEA 332
+ L++K E+ K EA
Sbjct: 239 ALSLLKKMEKGKIEA 253
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 119 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 176
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + + V+ + +++ LC K D+A +LFD M K L N
Sbjct: 177 EGFRLKSAMLA--NGVQPDVYTYSVLINGLCKESKMDDANELFDEML-----VKGLIPNG 229
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCKNG L +A +L E
Sbjct: 230 VTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDE 289
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD++TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 290 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQ 349
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 350 SVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKG 383
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G++ +GV + +L+ G+
Sbjct: 185 MLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLIPNGVTFTTLIDGHCKN 242
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + S+ + N+++ LC NG +A L D M + P +
Sbjct: 243 GRVDLAMEIYKRMLSQ--SLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKF 300
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A + ++M + D +++ LI LC+ G +AE+
Sbjct: 301 -----TYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEK 355
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M +G P++ YN L+
Sbjct: 356 MLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLM 411
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E+
Sbjct: 57 FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEIL 116
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP++ YN L+ +++G LD
Sbjct: 117 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 176
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E M+ ++ D +Y ++ L K+D+ E+ +L G I +
Sbjct: 177 EGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLI 236
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 237 DGH-CKNGR 244
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 161/326 (49%), Gaps = 10/326 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ +ML R + D +F E+ EK G+ + Y L+ G+F E
Sbjct: 478 KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK--GLEPNNFTYSILIDGFFKNKDE 535
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A + N+ N + + V N++++ LC G+ +A ++ + E KR +++
Sbjct: 536 QNAWDVINQMNASN--FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE----KRYSMS 589
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N + DG+ G A+E +R+M E SP+ ++F +LI+ CK+ + A E+
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTH 649
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM + D YG L+D + N + T F ++ + GL PN++VYN L+ +G
Sbjct: 650 EMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLG 709
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+D A + MV + D +Y M+ L G ++ ++ +LD G + E L
Sbjct: 710 KMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP-DEILH 768
Query: 303 EFVKGELSKEGREEEVVKLMEKKERE 328
+ LSK+G+ + K++E+ +++
Sbjct: 769 MVLVNGLSKKGQFLKASKMLEEMKKK 794
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 10/259 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ ++ GFV+ GD+D + E+ E G + V + SL+ G+ + A+E +E
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSE--NGKSPNVVTFTSLINGFCKSNRMDLALEMTHE 650
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
++ +K+ A +++D C A LF + P L N+ +N +
Sbjct: 651 M--KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL-----PELGLMPNVSVYNSLIS 703
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G+ G+ AI++++KM S D ++ +ID L K+G + A +LY E+ D G+ P
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP 763
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
DE + +L++ + + + +M + PN+ +Y+ ++ + G L+EA
Sbjct: 764 DEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLH 823
Query: 253 DIMVKK-LKMDDASYKFMM 270
D M++K + DD + ++
Sbjct: 824 DEMLEKGIVHDDTVFNLLV 842
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 124/280 (44%), Gaps = 9/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + YS L+ GF ++ D + + ++ ++ V+Y +++ G
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNA--SNFEANEVIYNTIINGLCKV 567
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A E + E MS + NS++D G D A++ + M P
Sbjct: 568 GQTSKAKEMLQNLIKE-KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSP--- 623
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +F + +G+C R A+E+ +M D ++ LID CK + A
Sbjct: 624 --NVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYT 681
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ E+ + G+ P+ Y L+ + ++D ++KMV+ G+ +L Y ++ L+
Sbjct: 682 LFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLL 741
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
+ G ++ A + +++ + D+ + ++ LS G+
Sbjct: 742 KDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQF 781
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 148/340 (43%), Gaps = 43/340 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGME 63
G A Y+ +++ FV++G+ + R+ +E+ +G G+ + SL+ GY KG E
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEM---VGFGIPMSVIAATSLVNGY-CKGNE 360
Query: 64 E-EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A++ +N E + V + +++ C N + ++A++ + RMK+ P + V
Sbjct: 361 LGKALDLFNRM--EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLV 418
Query: 123 N---------------LGSFN-----VMADGY---------CGQGRFKDAIEVFRKMGEY 153
+ L FN +A G+ C QG+ A + M +
Sbjct: 419 HTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQK 478
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
P+ + +NN++ C+ + A ++ EM +KG+ P+ +TY +L+D F+ +
Sbjct: 479 GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNA 538
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV--KKLKMDDASYKFMMK 271
+M S N +YN ++ L +VG +AK ++ K+ M SY ++
Sbjct: 539 WDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIID 598
Query: 272 ALSDGGKLDEILEIVGGILDDGG----IEFSEELQEFVKG 307
G D +E + ++G + F+ + F K
Sbjct: 599 GFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKS 638
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+FN + + Y R A++ F M + + P NN++ L ++ ++ EA+E+Y +M
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
GV D T LLM A + ++ FR+++ G P+
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPD 273
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/268 (16%), Positives = 110/268 (41%), Gaps = 45/268 (16%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF P ++YL+ ++R+ D F + ++ VV +++ + +
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDR--KVVPFVPYVNNVLSSLVRSNLID 221
Query: 65 EAMECYNEAV-----GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
EA E YN+ V G+N + ++ ++ A K +EA+K+F R+ + P
Sbjct: 222 EAKEIYNKMVLIGVAGDNVTTQL-------LMRASLRERKPEEAVKIFRRVMSRGAEPDG 274
Query: 120 LAVNLG-------------------------------SFNVMADGYCGQGRFKDAIEVFR 148
L +L ++ + + +G ++A+ V
Sbjct: 275 LLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMD 334
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+M + ++ +L++ CK L +A +L+ M ++G+ PD+ + ++++ +
Sbjct: 335 EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNM 394
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++ ++ +M + P+ + + ++
Sbjct: 395 EMEKAIEFYMRMKSVRIAPSSVLVHTMI 422
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 151/318 (47%), Gaps = 23/318 (7%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V D Y+ ++ D S L + ++ G D V Y +++ G+F +G
Sbjct: 74 GCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIG 133
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A Y+E + + V +NS+++ALC D A L +M + PP ++
Sbjct: 134 KACNLYHEMMQQ--GFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKV---- 187
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ M GY GR+++A ++FR+M PD +S+N+ +D LCK+G EA E++
Sbjct: 188 -TYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYS 246
Query: 185 MSDKGVNPDEYTYGLLM-----DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
M+ KG P+ TYG+L+ + CF D ++F M G+ N V+ L+
Sbjct: 247 MAAKGHRPNIVTYGILLHGYATEGCFA-----DMMSFFNTMKGDGIVANCLVFTILIDAY 301
Query: 240 VQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKL----DEILEIVGGILDDGG 294
+ GM+DEA M + L D +Y ++ AL G+L D+ +++G +
Sbjct: 302 AKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNT 361
Query: 295 IEFSEELQEF-VKGELSK 311
+ + +Q F G+L K
Sbjct: 362 VVYHSLIQGFCTHGDLVK 379
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 123/249 (49%), Gaps = 9/249 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GFV D V ++ ++ + D L ++ + GV + V Y S++ GY
Sbjct: 142 MMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDN--GVPPNKVTYTSMIHGYSTL 199
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA + + E G + V+ NS +D+LC +G+ EA ++F M + + P
Sbjct: 200 GRWEEATKMFREMTGR--GLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRP--- 254
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ ++ GY +G F D + F M + L F LID K GM+ EA
Sbjct: 255 --NIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAML 312
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EM +G++PD +TY L+ A + R+ D F +M+ +G++PN VY+ L+
Sbjct: 313 ILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFC 372
Query: 241 QVGMLDEAK 249
G L +AK
Sbjct: 373 THGDLVKAK 381
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 9/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VA+ +V++ L+ + + G D + E++ + G+ D Y +L+ G
Sbjct: 286 GIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQ--GLSPDVFTYSTLISALCRMGRLA 343
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A++ +N+ +G + V+ + V +S++ C +G +A +L M N P N+
Sbjct: 344 DAVDKFNQMIG--TGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRP----NI 397
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
FN + C +GR DA +F + + D + FN LID C G + +A +
Sbjct: 398 AFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDA 457
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G+ PD +TY L++ F+ R+DDG FR+M D ++P YN ++ L + G
Sbjct: 458 MISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGR 517
Query: 245 LDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDE 281
A+ M+ + +Y ++K L DE
Sbjct: 518 TVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDE 555
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 149/336 (44%), Gaps = 16/336 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGD-SDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKG 61
+G D YS L+ R G +D V ++ + +G GV + VVY SL++G+ G
Sbjct: 320 QGLSPDVFTYSTLISALCRMGRLADAV----DKFNQMIGTGVQPNTVVYHSLIQGFCTHG 375
Query: 62 MEEEAMECYNEAVGENSSVKMSAVAN-NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A E E + N+ + +A NS++ ++C G+ +A +FD +K+
Sbjct: 376 DLVKAKELVYEMM--NNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERS--- 430
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ FN + DGYC G A V M PDT ++N L++ K+G + +
Sbjct: 431 --DIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLN 488
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EMSDK + P TY +++D F R +M+ G +L YN ++ L
Sbjct: 489 LFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLC 548
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ DEA F + +K + + M+ ++ + +E ++ I D G + +
Sbjct: 549 RNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNAS 608
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
++ L KEG EE + E+ +R
Sbjct: 609 TYGIMIR-NLLKEGSVEEADNMFSSMEKSGCAPCSR 643
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 109/241 (45%), Gaps = 11/241 (4%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK-LF 107
YG +M G E + + + + +K A N+VL LC + D+A+K L
Sbjct: 10 TYGVVMNGCCRARRPELGLAFFGRLL--RTGLKADKTAANTVLKCLCCTKRTDDAVKVLL 67
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG--EYRCSPDTLSFNNL 165
RM P S+ ++ C R + A+++ R M E CSPD +++N +
Sbjct: 68 RRMTELGCVPDAF-----SYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTV 122
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
I K G + +A LY EM +G PD T+ +++A + VD+ R+MVD+G+
Sbjct: 123 IHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGV 182
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILE 284
PN Y ++ +G +EA F M + L D S+ M +L G+ E E
Sbjct: 183 PPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAE 242
Query: 285 I 285
I
Sbjct: 243 I 243
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 113/244 (46%), Gaps = 9/244 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
+D ++++ L+ G+ G+ F + + + G+ D Y +L+ GYF G ++ +
Sbjct: 430 SDIIMFNTLIDGYCLVGEMGKAFSVLDAMIS--AGIGPDTFTYNTLVNGYFKSGRIDDGL 487
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E + +K + V N +LD L G+ A K+ M V+L ++
Sbjct: 488 NLFREM--SDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGT-----TVSLPTY 540
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N++ G C +AI +F+K+ + + N +I+ + EA++L+ +SD
Sbjct: 541 NIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISD 600
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G+ P+ TYG+++ + V++ F M SG P + N + L++ G + +
Sbjct: 601 SGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVK 660
Query: 248 AKSF 251
A ++
Sbjct: 661 AGNY 664
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 22/173 (12%)
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KS 250
P +TYG++M+ C R + G +F +++ +GL+ + N ++ L D+A K
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 251 FFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVG------GILDDGGIEFSEELQE 303
M + + DA SY ++K L D + + L+++ G+ + ++ +
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125
Query: 304 FVK-----------GELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKR 345
F K E+ ++G +VV A KAR + AE R
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVV---THNSIINALCKARAVDNAELLLR 175
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 152/324 (46%), Gaps = 11/324 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ GF ++GDSD + + E+ ++ G++ D V Y S++ +
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDR--GILPDVVTYSSIIAALCKAQAMD 253
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+AME N V + V + NS+L C++G+ EA+ +M+++ P N+
Sbjct: 254 KAMEVLNTMV--KNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEP-----NV 306
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + + C GR +A ++F M + PD ++ L+ G L E L
Sbjct: 307 VTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDL 366
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G+ PD + + +L+ A + +VD F KM GL PN+ Y ++ L + G
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+D+A +F+ M+ + L + Y ++ L K D+ E++ +LD GI +
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR-GICLNTIFFN 485
Query: 304 FVKGELSKEGREEEVVKLMEKKER 327
+ KEGR E KL + R
Sbjct: 486 SIIDSHCKEGRVIESEKLFDLMVR 509
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 151/319 (47%), Gaps = 13/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V++ L+ + + D +F ++++ G+ + V YG+++
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQH--GLNPNVVCYGTVIDVLCKS 424
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++AM + + + E + + + S++ LC K+D+A +L M + + +
Sbjct: 425 GSVDDAMLYFEQMIDEGLTPNI--IVYTSLIHGLCTCDKWDKAEELILEMLD-----RGI 477
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N FN + D +C +GR ++ ++F M PD +++N LID C G + EA +
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATK 537
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M GV PD TYG L++ V+R+DD F++MV SG+ PN+ YN ++ L
Sbjct: 538 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 597
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI-LDDGGIEFS 298
AK + + K +++ ++Y ++ L DE L + + L D ++
Sbjct: 598 HTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--LQLE 655
Query: 299 EELQEFVKGELSKEGREEE 317
+ G L K GR +E
Sbjct: 656 TRTFNIMIGALLKCGRMDE 674
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 146/312 (46%), Gaps = 10/312 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + +VY+ L+ G D L E+ ++ G+ + + + S++ + +
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR--GICLNTIFFNSIIDSHCKE 494
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+ + ++ V VK + N+++D C GK DEA KL M + P
Sbjct: 495 GRVIESEKLFDLMV--RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP--- 549
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + +GYC R DA+ +F++M SP+ +++N ++ L A A+E
Sbjct: 550 --DIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 607
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY ++ G + TY +++ + N D+ F+ + + L+ +N ++G L+
Sbjct: 608 LYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 667
Query: 241 QVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G +DEAK F L D +Y M + L + G L+E+ ++ + ++G S
Sbjct: 668 KCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSR 727
Query: 300 ELQEFVKGELSK 311
L V+ L +
Sbjct: 728 MLNSIVRKLLQR 739
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 9/227 (3%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G C R DA++ V R+M E C PD S+NNL+ LC EA EL
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188
Query: 185 MSDK---GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M+D G PD +Y +++ F+ D + + +M+D G+ P++ Y+ ++ L +
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248
Query: 242 VGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+D+A + MVK M D +Y ++ G+ E + + + D G+E +
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD-GVEPNVV 307
Query: 301 LQEFVKGELSKEGREEEVVKL---MEKKEREKAEAKAREAEAAEAAK 344
+ L K GR E K+ M K+ E A R A K
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATK 354
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 10/269 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D + Y+ L+ G G D +L + GV D V YG+L+ GY +
Sbjct: 511 GVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV--GVKPDIVTYGTLINGYCRVSRMD 568
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ + E V +S V + + N +L L + + A +L+ + + L
Sbjct: 569 DALALFKEMV--SSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGT-----QLEL 621
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ G C +A+ +F+ + +T +FN +I L K G + EA++L+
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 681
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
S G+ PD TY L+ + E +++ F M ++G + + N +V KL+Q G
Sbjct: 682 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 741
Query: 245 LDEAKSF-FDIMVKKLKMDDASYKFMMKA 272
+ A ++ F I K ++ ++ F++++
Sbjct: 742 ITRAGTYLFMIDEKHFSLEASTASFLLES 770
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 11/127 (8%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V P +TY +L+ C R+D G +V G R + +
Sbjct: 71 AAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITF 130
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASYKFMMKALSDGGKLDEILEIVG 287
L+ L +A DI+++++ D SY ++K L D + E LE++
Sbjct: 131 TPLLKGLCADKRTSDA---MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLH 187
Query: 288 GILDDGG 294
+ DD G
Sbjct: 188 MMADDRG 194
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 150/331 (45%), Gaps = 47/331 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF+ D YS ++ D F LFEE+K VV D Y L+ +
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN--HVVPDVFTYTILIDSFCKV 528
Query: 61 GMEEEAMECYNEAVGENSSV----------------KMSA-----------------VAN 87
G+ ++A + ++E V + + KMS+ V
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPP-----------KRLAVNLGSFNVMADGYCG 136
+++D C +G+ ++A +++ RM+ + P N+ ++ + DG C
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCK 648
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
+ K+A ++ M C P+ + ++ LID CK G L EA+ ++ +MS++G P+ YT
Sbjct: 649 AHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT 708
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
Y L+D F+ R+D +M+++ PN+ +Y ++ L +VG DEA +M
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768
Query: 257 KK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+K + +Y M+ GK+D+ LE++
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELM 799
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 21/269 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK-------LGGVVSDGVV---- 49
M +G + + V Y+ L+ G + G + +++ ++ + + DG +
Sbjct: 576 MLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPN 635
Query: 50 ---YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKL 106
YG+L+ G +EA + + V + + + ++++D C GK DEA +
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLD--VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 107 FDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
F +M P N+ +++ + D R A++V +M E C+P+ + + +I
Sbjct: 694 FTKMSERGYGP-----NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
D LCK G EA L M +KG +P+ TY ++D + +VD R+M G
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCA 808
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
PN Y L+ G+LD+A D M
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 131/297 (44%), Gaps = 18/297 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G +++ L+ + R GD ++L +++ + G VVY L+ G +
Sbjct: 360 MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGD--CGCQPGYVVYNILIGG--IC 415
Query: 61 GMEE----EAMECYNEAVGE--NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH 114
G E+ + +E +A GE ++ V ++ V +++ LC GKF++A + M ++
Sbjct: 416 GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKG 475
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
P + +++ + C + +A +F +M PD ++ LID CK G+
Sbjct: 476 FIP-----DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L +A + + EM G P+ TY L+ A + ++ F M+ G PN+ Y
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
L+ + G +++A + M + D F + DG D + G ++D
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGNADIPDVDMYF---KIDDGNIRDPNIFTYGALVD 644
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 137/313 (43%), Gaps = 20/313 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G + +VY L+ GF + G D +F ++ E+ G + Y SL+ F
Sbjct: 662 MSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER--GYGPNVYTYSSLIDRLFKD 719
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ A++ + + ENS + + ++D LC GK DEA +L M+ + P
Sbjct: 720 KRLDLALKVLSRML-ENSCAP-NVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP--- 774
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ M DG+ G+ +E+ R+MG C+P+ +++ LI+ C G+L +A +
Sbjct: 775 --NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQ 832
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNR---VDDGATYFRKMVDSGLRPNLAVYNRLVG 237
L EM Y +++ NR + G ++ ++ P + Y L+
Sbjct: 833 LLDEMKQTYWPKHMAGYRKVIEG---FNREFIISLGL--LDEIAENVAVPIIPAYRILID 887
Query: 238 KLVQVGMLDEAKSFFDIMVKKLKMDDAS---YKFMMKALSDGGKLDEILEIVGGILDDGG 294
+ G L+ A M A Y ++++LS K+D+ E+ ++ GG
Sbjct: 888 SFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGG 947
Query: 295 IEFSEELQEFVKG 307
I VKG
Sbjct: 948 IPELSIFFYLVKG 960
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 125/293 (42%), Gaps = 30/293 (10%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-----VYGSLMKGYFMKG 61
+ + V Y L+ G +R R K L ++++G ++ SL+ Y G
Sbjct: 331 IPNVVTYRILLCGCLRK-------RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSG 383
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE------ALKLFDRMKNEHN 115
A + + + + V N ++ +C N K A K + M + H
Sbjct: 384 DYSYAYKLLKKM--GDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAH- 440
Query: 116 PPKRLAVNLGSFNV--MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
V L NV +A CG G+F+ A + R+M PDT +++ +I LC
Sbjct: 441 ------VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
+ A L+ EM V PD +TY +L+D+ +V + +F +MV G PN+ Y
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI 285
L+ ++ + A F++M+ + + + +Y ++ G++++ +I
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 107/234 (45%), Gaps = 13/234 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
++Y+ ++ G + G +D +RL ++EK G + V Y +++ G+ G ++ +E
Sbjct: 742 IIYTEMIDGLCKVGKTDEAYRLMSMMEEK--GCHPNVVTYTAMIDGFGKAGKVDKCLELM 799
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + V +++ C G D+A +L D MK + P ++ + +
Sbjct: 800 RQMGAKGCAPNF--VTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPK-----HMAGYRKV 852
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ F ++ + ++ E P ++ LID CK G L A EL+ MS
Sbjct: 853 IEGF--NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTS 910
Query: 191 NP--DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
D+ Y L+++ ++VD + M+ G P L+++ LV L+++
Sbjct: 911 YSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRI 964
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 93/226 (41%), Gaps = 15/226 (6%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
+S M + LC G++ EAL L ++ + ++ + M G C
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEK--------EEFKLDTVIYTQMISGLCE 311
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
F++A++ +M C P+ +++ L+ + L + + M +G P
Sbjct: 312 ASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI 371
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG------KLVQVGMLDEA-K 249
+ L+ A +KM D G +P VYN L+G KL + +L+ A K
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431
Query: 250 SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
++ +++ + ++ + + + L GK ++ I+ ++ G I
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 4/163 (2%)
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
N LI + C+NG+ A E G + D G P TY L+ E +R+D R+M
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
DSG + V L + G EA + + ++ K+D Y M+ L + +E
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIE--KEEFKLDTVIYTQMISGLCEASLFEE 317
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKE--GREEEVVKLM 322
++ + + I + + G L K GR + ++ +M
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMM 360
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL----------------------- 124
N ++ C NG ++ AL+ R+K+ P RL N
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 125 GSFNVMADGY---------CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
FN+ DGY C GR+++A+ + K E++ DT+ + +I LC+ +
Sbjct: 261 SGFNM--DGYTLGCFVHLLCKAGRWREALALIEK-EEFKL--DTVIYTQMISGLCEASLF 315
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
EA + M P+ TY +L+ C ++ M+ G P+ ++N L
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375
Query: 236 VGKLVQVG 243
+ + G
Sbjct: 376 IHAYCRSG 383
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
NV+ C G + A+E ++ + P L++N L+ + L A ++ EMS
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
D G N D YT G + + R + K + + +Y +++ L + + +
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFE 316
Query: 247 EAKSFFDIM 255
EA F M
Sbjct: 317 EAMDFLSRM 325
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 150/331 (45%), Gaps = 47/331 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF+ D YS ++ D F LFEE+K VV D Y L+ +
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN--HVVPDVFTYTILIDSFCKV 528
Query: 61 GMEEEAMECYNEAVGENSSV----------------KMSA-----------------VAN 87
G+ ++A + ++E V + + KMS+ V
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPP-----------KRLAVNLGSFNVMADGYCG 136
+++D C +G+ ++A +++ RM+ + P N+ ++ + DG C
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCK 648
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
+ K+A ++ M C P+ + ++ LID CK G L EA+ ++ +MS++G P+ YT
Sbjct: 649 AHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT 708
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
Y L+D F+ R+D +M+++ PN+ +Y ++ L +VG DEA +M
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768
Query: 257 KK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+K + +Y M+ GK+D+ LE++
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELM 799
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 21/269 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK-------LGGVVSDGVV---- 49
M +G + + V Y+ L+ G + G + +++ ++ + + DG +
Sbjct: 576 MLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPN 635
Query: 50 ---YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKL 106
YG+L+ G +EA + + V + + + ++++D C GK DEA +
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLD--VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 107 FDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
F +M P N+ +++ + D R A++V +M E C+P+ + + +I
Sbjct: 694 FTKMSERGYGP-----NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
D LCK G EA L M +KG +P+ TY ++D + +VD R+M G
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCA 808
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
PN Y L+ G+LD+A D M
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 131/297 (44%), Gaps = 18/297 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G +++ L+ + R GD ++L +++ + G VVY L+ G +
Sbjct: 360 MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGD--CGCQPGYVVYNILIGG--IC 415
Query: 61 GMEE----EAMECYNEAVGE--NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH 114
G E+ + +E +A GE ++ V ++ V +++ LC GKF++A + M ++
Sbjct: 416 GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKG 475
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
P + +++ + C + +A +F +M PD ++ LID CK G+
Sbjct: 476 FIP-----DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L +A + + EM G P+ TY L+ A + ++ F M+ G PN+ Y
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
L+ + G +++A + M + D F + DG D + G ++D
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGNADIPDVDMYF---KIDDGNIRDPNIFTYGALVD 644
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 145/327 (44%), Gaps = 21/327 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G + +VY L+ GF + G D +F ++ E+ G + Y SL+ F
Sbjct: 662 MSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER--GYGPNVYTYSSLIDRLFKD 719
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ A++ + + ENS + + ++D LC GK DEA +L M+ + P
Sbjct: 720 KRLDLALKVLSRML-ENSCAP-NVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP--- 774
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ M DG+ G+ +E+ R+MG C+P+ +++ LI+ C G+L +A +
Sbjct: 775 --NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQ 832
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNR---VDDGATYFRKMVDSGLRPNLAVYNRLVG 237
L EM Y +++ NR + G ++ ++ P + Y L+
Sbjct: 833 LLDEMKQTYWPKHMAGYRKVIEG---FNREFIISLGL--LDEIAENVAVPIIPAYRILID 887
Query: 238 KLVQVGMLDEAKSFFDIMVKKLKMDDAS---YKFMMKALSDGGKLDEILEIVGGILDDGG 294
+ G L+ A M A Y ++++LS K+D+ E+ ++ GG
Sbjct: 888 SFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGG 947
Query: 295 IEFSEELQEFVKGELSKEGREEEVVKL 321
I VKG L + R EE ++L
Sbjct: 948 IPELSIFFYLVKG-LIRINRWEEALQL 973
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 125/293 (42%), Gaps = 30/293 (10%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-----VYGSLMKGYFMKG 61
+ + V Y L+ G +R R K L ++++G ++ SL+ Y G
Sbjct: 331 IPNVVTYRILLCGCLRK-------RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSG 383
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE------ALKLFDRMKNEHN 115
A + + + + V N ++ +C N K A K + M + H
Sbjct: 384 DYSYAYKLLKKM--GDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAH- 440
Query: 116 PPKRLAVNLGSFNV--MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
V L NV +A CG G+F+ A + R+M PDT +++ +I LC
Sbjct: 441 ------VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
+ A L+ EM V PD +TY +L+D+ +V + +F +MV G PN+ Y
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI 285
L+ ++ + A F++M+ + + + +Y ++ G++++ +I
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 115/251 (45%), Gaps = 13/251 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
++Y+ ++ G + G +D +RL ++EK G + V Y +++ G+ G ++ +E
Sbjct: 742 IIYTEMIDGLCKVGKTDEAYRLMSMMEEK--GCHPNVVTYTAMIDGFGKAGKVDKCLELM 799
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + V +++ C G D+A +L D MK + P ++ + +
Sbjct: 800 RQMGAKGCAPNF--VTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPK-----HMAGYRKV 852
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ F ++ + ++ E P ++ LID CK G L A EL+ EMS
Sbjct: 853 IEGF--NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTS 910
Query: 191 NP--DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D+ Y L+++ ++VD + M+ G P L+++ LV L+++ +EA
Sbjct: 911 YSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEA 970
Query: 249 KSFFDIMVKKL 259
D + + +
Sbjct: 971 LQLSDCICQMM 981
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 93/226 (41%), Gaps = 15/226 (6%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
+S M + LC G++ EAL L ++ + ++ + M G C
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEK--------EEFKLDTVIYTQMISGLCE 311
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
F++A++ +M C P+ +++ L+ + L + + M +G P
Sbjct: 312 ASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI 371
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG------KLVQVGMLDEA-K 249
+ L+ A +KM D G +P VYN L+G KL + +L+ A K
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431
Query: 250 SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
++ +++ + ++ + + + L GK ++ I+ ++ G I
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 4/163 (2%)
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
N LI + C+NG+ A E G + D G P TY L+ E +R+D R+M
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
DSG + V L + G EA + I ++ K+D Y M+ L + +E
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALAL--IEKEEFKLDTVIYTQMISGLCEASLFEE 317
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKE--GREEEVVKLM 322
++ + + I + + G L K GR + ++ +M
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMM 360
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL----------------------- 124
N ++ C NG ++ AL+ R+K+ P RL N
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 125 GSFNVMADGY---------CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
FN+ DGY C GR+++A+ + K E++ DT+ + +I LC+ +
Sbjct: 261 SGFNM--DGYTLGCFVHLLCKAGRWREALALIEK-EEFK--LDTVIYTQMISGLCEASLF 315
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
EA + M P+ TY +L+ C ++ M+ G P+ ++N L
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375
Query: 236 VGKLVQVG 243
+ + G
Sbjct: 376 IHAYCRSG 383
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
NV+ C G + A+E ++ + P L++N L+ + L A ++ EMS
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
D G N D YT G + + R + K + + +Y +++ L + + +
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFE 316
Query: 247 EAKSFFDIM 255
EA F M
Sbjct: 317 EAMDFLSRM 325
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 154/332 (46%), Gaps = 11/332 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MFV + + V ++ L+ G + L + + + G D YG+++ G +
Sbjct: 160 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR--GCQPDLFTYGTVVNGLCKR 217
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+ + E ++ V +++DALCN ++AL LF M N+ P
Sbjct: 218 GDIDLALSLLKKM--EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP--- 272
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N + C GR+ DA + M E + +P+ ++F+ LID K G L EAE+
Sbjct: 273 --NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 330
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY EM + ++PD +TY L++ +R+D+ F M+ PN+ YN L+
Sbjct: 331 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 390
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ ++E F M ++ L + +Y +++ L G D +I ++ DG
Sbjct: 391 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 450
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAE 331
+ G L K G+ E+ + + E ++ K E
Sbjct: 451 TYSILLDG-LCKYGKLEKALVVFEYLQKSKME 481
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 135/270 (50%), Gaps = 11/270 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V +S L+ FV++G +L++E+ ++ + D Y SL+ G+ M +EA +
Sbjct: 310 VTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMF 367
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ ++ + V N+++ C + +E ++LF M + L N ++N +
Sbjct: 368 ELMISKDCFP--NVVTYNTLIKGFCKAKRVEEGMELFREMSQ-----RGLVGNTVTYNTL 420
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G G A ++F+KM PD ++++ L+D LCK G L +A ++ + +
Sbjct: 421 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 480
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD YTY ++++ + +V+DG F + G++PN+ +Y ++ + G+ +EA +
Sbjct: 481 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 540
Query: 251 FFDIMVKKLKMDDA-SYKFMMKA-LSDGGK 278
F M + + ++ +Y +++A L DG K
Sbjct: 541 LFREMKEDGTLPNSGTYNTLIRARLRDGDK 570
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 9/260 (3%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A++ + E V S S V N +L A+ KFD + L +RM+N R++ +
Sbjct: 46 DDAVDLFGEMV--QSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN-----LRISYD 98
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L S+N++ + +C + + A+ V KM + PD ++ ++L++ C ++EA L
Sbjct: 99 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 158
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M P+ T+ L+ F N+ + +MV G +P+L Y +V L + G
Sbjct: 159 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 218
Query: 244 MLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+D A S M K K++ D Y ++ AL + +++ L + +D+ GI +
Sbjct: 219 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE-MDNKGIRPNVVTY 277
Query: 303 EFVKGELSKEGREEEVVKLM 322
+ L GR + +L+
Sbjct: 278 NSLIRCLCNYGRWSDASRLL 297
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 97/242 (40%), Gaps = 41/242 (16%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
+N + + N +++ C + AL + +M P ++ + + + +GYC
Sbjct: 91 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEP-----DIVTLSSLLNGYC 145
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
R +A+ + +M P+T++FN LI L + +EA L M +G PD +
Sbjct: 146 HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF 205
Query: 196 TYG-----------------------------------LLMDACFEVNRVDDGATYFRKM 220
TYG ++DA V+D F +M
Sbjct: 206 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 265
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
+ G+RPN+ YN L+ L G +A D++ +K+ + ++ ++ A GKL
Sbjct: 266 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 325
Query: 280 DE 281
E
Sbjct: 326 VE 327
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V + V Y+ L+ G + GD D ++F+++ GV D + Y L+ G G
Sbjct: 408 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD--GVPPDIITYSILLDGLCKYGKL 465
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A+ + + S ++ N +++ +C GK ++ LF + + P N
Sbjct: 466 EKALVVFEYL--QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP-----N 518
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + M G+C +G ++A +FR+M E P++ ++N LI ++G A + EL
Sbjct: 519 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 578
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
EM G D T ++ +N + DG
Sbjct: 579 EMRSCGFVGDASTISMV------INMLHDG 602
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ DA+++F +M + R P + FN L+ + K L M + ++ D Y+Y
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VK 257
+L++ +++ KM+ G P++ + L+ + EA + D M V
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163
Query: 258 KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+ + + ++ ++ L K E + ++ ++ G V G L K G +
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG-LCKRGDIDL 222
Query: 318 VVKLMEKKEREKAEA 332
+ L++K E+ K EA
Sbjct: 223 ALSLLKKMEKGKIEA 237
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 16/294 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VAD Y+ ++ F + G + + F E++E G + V Y +L+ Y
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV--GCTPNVVTYTALIHAYLKAKKVS 570
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------- 117
A E + + E + V ++++D C G+ ++A ++F+RM + P
Sbjct: 571 YANELFETMLSEGCLPNI--VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628
Query: 118 ----KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
N+ ++ + DG+C R ++A ++ M C P+ + ++ LID LCK G
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
L EA+E+ EMS+ G YTY L+D F+V R D + KM+++ PN+ +Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
++ L +VG DEA +M +K + + +Y M+ GK++ LE++
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 134/307 (43%), Gaps = 37/307 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG-------------------DSDGVFRLFEELKEKLG 41
M +G + + V YS L+ G + G D D F+ +++ E+
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER-- 636
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
+ V YG+L+ G+ EEA + + E + + + ++++D LC GK D
Sbjct: 637 ---PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC--EPNQIVYDALIDGLCKVGKLD 691
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EA ++ M +EH P L +++ + D Y R A +V KM E C+P+ +
Sbjct: 692 EAQEVKTEM-SEHGFP----ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ +ID LCK G EA +L M +KG P+ TY ++D + +++ +M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYK-----FMMKALSD 275
G+ PN Y L+ + G LD A + + M + A Y+ F + +
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIES 866
Query: 276 GGKLDEI 282
G LDEI
Sbjct: 867 LGLLDEI 873
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 142/335 (42%), Gaps = 30/335 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE--KLGGVVSDGVVYGSLM--KG 56
M ++G P +++ L+ + GD ++L +++ + + G V ++ GS+ K
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 57 YFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+ + A + Y+E + + V ++ + +S LC+ GK+++A + M +
Sbjct: 423 SLNCDLLDLAEKAYSEMLA--AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P + +++ + + C + + A +F +M D ++ ++D CK G++
Sbjct: 481 P-----DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A + + EM + G P+ TY L+ A + +V F M+ G PN+ Y+ L+
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+ G +++A F+ M + D F K D + + + G L DG
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYF--KQYDDNSERPNV--VTYGALLDG--- 648
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEKKEREKAE 331
K R EE KL++ E E
Sbjct: 649 ------------FCKSHRVEEARKLLDAMSMEGCE 671
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 13/247 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+Y+ ++ G + G +D ++L + ++EK G + V Y +++ G+ M G E +E
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEK--GCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E +G + V + V ++D C NG D A L + MK H P + + +
Sbjct: 803 -ERMG-SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP-----THTAGYRKV 855
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ F +++ + ++G+ +P + LID L K L A L E++
Sbjct: 856 IEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913
Query: 191 NPDEY--TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+Y TY L+++ N+V+ F +M G+ P + + L+ L + + EA
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Query: 249 KSFFDIM 255
D +
Sbjct: 974 LLLLDFI 980
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 123/322 (38%), Gaps = 51/322 (15%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-----GVVSDGVVYGSLMKGYFMK 60
FV D V Y+ L+ G LFEE + L + + V Y +L+ G K
Sbjct: 298 FVPDTVFYTKLISGLCEAS-------LFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 350
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
N + E S NS++ A C +G A KL +M + P +
Sbjct: 351 KQLGRCKRVLNMMMMEGCYP--SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 121 AVN----------------------------------LGSFNV--MADGYCGQGRFKDAI 144
N L NV C G+++ A
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
V R+M PDT +++ +++ LC + A L+ EM G+ D YTY +++D+
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD- 263
+ ++ +F +M + G PN+ Y L+ ++ + A F+ M+ + + +
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 264 ASYKFMMKALSDGGKLDEILEI 285
+Y ++ G++++ +I
Sbjct: 589 VTYSALIDGHCKAGQVEKACQI 610
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 68/202 (33%), Gaps = 37/202 (18%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N ++ C NG F AL+ R+K+ P R ++N + + R A +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSR-----STYNCLIQAFLKADRLDSASLIH 258
Query: 148 RKMG---------EYRC-----------------------SPDTLSFNNLIDQLCKNGML 175
R+M RC PDT+ + LI LC+ +
Sbjct: 259 REMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLF 318
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
EA + M P+ TY L+ C ++ M+ G P+ ++N L
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378
Query: 236 VGKLVQVGMLDEAKSFFDIMVK 257
V G A MVK
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVK 400
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 80/219 (36%), Gaps = 47/219 (21%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V ++ LC F+EA+ +RM+ P N+ +++ + G + +
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP-----NVVTYSTLLCGCLNKKQLGRC 356
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
V M C P FN+L+ C +G Y Y LL
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSG------------------DHSYAYKLL--- 395
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL------VQVGMLDEA-KSFFDIMV 256
+KMV G P VYN L+G + + +LD A K++ +++
Sbjct: 396 --------------KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+ ++ + + L GK ++ ++ ++ G I
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 4/163 (2%)
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
N L+ + C+NG + A E G + D P TY L+ A + +R+D + R+M
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ LR + L +VG EA + + + D Y ++ L + +E
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENFVPDTVFYTKLISGLCEASLFEE 320
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKE--GREEEVVKLM 322
++ + + + + G L+K+ GR + V+ +M
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 363
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 120/234 (51%), Gaps = 11/234 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + Y+ L+ G+ +D D FRLFEE++ K G+ V Y +L+ G
Sbjct: 315 RGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPK--GLKPSTVTYNTLIGALCQSGRV 372
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK-NEHNPPKRLAV 122
A + + E +K+S +LD LC NG +EA+ LF +K EH P
Sbjct: 373 RTAQKLFVEMQTCGQFLKLSTYC--VLLDGLCKNGHLEEAIDLFQSIKKTEHKP------ 424
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ F+++ DG C G+ ++A + F ++ + PDT+++N LI+ LC GML+EA +L
Sbjct: 425 NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 484
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+M +KG PD T+ +++ + N + + +M + P+ AV + L+
Sbjct: 485 WQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 132/277 (47%), Gaps = 11/277 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D Y L+ G + + +L E++K G D YG ++ GM
Sbjct: 106 KGLFGDAKTYGILINGLCKARKTGLAIKLHEKMK---GNCKGDVFTYGMIIDSLCKDGMT 162
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA++ ++E +G + + V +S++D LC G+ EAL+ F M+ + ++ +
Sbjct: 163 TEALDMFSEMIG--AGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG-----RGISAD 215
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + G G +K+ M + SPD +F LID LCK G + EA+++
Sbjct: 216 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 275
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M KG PD TY LM+ V +++D F + D G++ N+ YN L+ +
Sbjct: 276 LMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 335
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
+DEA F+ M K LK +Y ++ AL G++
Sbjct: 336 KIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRV 372
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 160/354 (45%), Gaps = 36/354 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + D VVYS LM G R G F+E++ + G+ +D Y SL+ G
Sbjct: 172 MIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR--GISADVYTYNSLIHGLSRA 229
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G+ +E N V S A ++D LC GK EA ++ + M ++ P L
Sbjct: 230 GLWKEVTWFLNLMVDRGFSP--DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDIL 287
Query: 121 A------------------------------VNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+N+ S+N++ +GYC + +A +F +M
Sbjct: 288 TYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEM 347
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
P T+++N LI LC++G + A++L+ EM G TY +L+D + +
Sbjct: 348 RPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHL 407
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
++ F+ + + +PN+ V++ L+ + + G L+EA FD + K L+ D +Y +
Sbjct: 408 EEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNIL 467
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+ L + G L E ++++ + + G + S ++ L KE E ++L+E
Sbjct: 468 INGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQ-NLLKENEIHEAIQLLE 520
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 9/274 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D + Y+ LM G G + +LFE L ++ G+ + Y L+ GY
Sbjct: 277 MHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR--GIKLNVFSYNILINGYCKD 334
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA + E +K S V N+++ ALC +G+ A KLF M+
Sbjct: 335 QKIDEAFRLFEEM--RPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ----- 387
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ L ++ V+ DG C G ++AI++F+ + + P+ F+ L+D +C+ G L EA +
Sbjct: 388 FLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 447
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ E+S G+ PD Y +L++ + + +M + G P+ +N ++ L+
Sbjct: 448 QFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLL 507
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALS 274
+ + EA + M + D + M+ L+
Sbjct: 508 KENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLA 541
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
AV +++ + +A++LFD M K L + ++ ++ +G C + A
Sbjct: 77 AVTVTTLVKGVWMENGIPDAVQLFDEMTE-----KGLFGDAKTYGILINGLCKARKTGLA 131
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
I++ KM + C D ++ +ID LCK+GM EA +++ EM G+ PD Y LMD
Sbjct: 132 IKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
R+ + +F++M G+ ++ YN L+ L + G+ E F ++MV + D
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250
Query: 263 DASYKFMMKALSDGGKLDEILEIV 286
++ ++ L GK+ E +I+
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQIL 274
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 45/213 (21%)
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV------ 210
PD ++ L+ + + +A +L+ EM++KG+ D TYG+L++ + +
Sbjct: 75 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134
Query: 211 -----------------------DDGAT-----YFRKMVDSGLRPNLAVYNRLVGKLVQV 242
DG T F +M+ +G+ P++ VY+ L+ L +
Sbjct: 135 HEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRF 194
Query: 243 GMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G L EA FF M + + D +Y ++ LS G E+ + ++D G FS +
Sbjct: 195 GRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG---FSPDA 251
Query: 302 QEF---VKGELSKEGR---EEEVVKLMEKKERE 328
F + G L KEG+ +++++LM K +E
Sbjct: 252 FTFTILIDG-LCKEGKVGEAQQILELMHHKGKE 283
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 141/292 (48%), Gaps = 10/292 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRJAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 195 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDDANELFDEML-----VKGLVPNG 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A L E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 308 MSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGR 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+D K +++ LK D +Y ++ G + + +++ + DG +
Sbjct: 368 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHV 419
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V +GV + +L+ G+
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLVPNGVTFTTLIDGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 261 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 319 -----TYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G ++M G P++ YN L+
Sbjct: 374 MLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLM 429
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 98/252 (38%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + +++ LC + EA L + + AV +
Sbjct: 12 NSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSD 71
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
J F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 72 JYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYE 131
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP++ YN L+ +++G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M+ ++ D +Y ++ L K+D+ E+ +L G +
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFT 251
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 252 TLIDGH-CKNGR 262
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 16/294 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VAD Y+ ++ F + G + + F E++E G + V Y +L+ Y
Sbjct: 472 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV--GCTPNVVTYTALIHAYLKAKKVS 529
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------- 117
A E + + E + V ++++D C G+ ++A ++F+RM + P
Sbjct: 530 YANELFETMLSEGCLPNI--VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 587
Query: 118 ----KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
N+ ++ + DG+C R ++A ++ M C P+ + ++ LID LCK G
Sbjct: 588 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 647
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
L EA+E+ EMS+ G YTY L+D F+V R D + KM+++ PN+ +Y
Sbjct: 648 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 707
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
++ L +VG DEA +M +K + + +Y M+ GK++ LE++
Sbjct: 708 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 761
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 134/307 (43%), Gaps = 37/307 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG-------------------DSDGVFRLFEELKEKLG 41
M +G + + V YS L+ G + G D D F+ +++ E+
Sbjct: 538 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER-- 595
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
+ V YG+L+ G+ EEA + + E + + + ++++D LC GK D
Sbjct: 596 ---PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC--EPNQIVYDALIDGLCKVGKLD 650
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EA ++ M +EH P L +++ + D Y R A +V KM E C+P+ +
Sbjct: 651 EAQEVKTEM-SEHGFP----ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 705
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ +ID LCK G EA +L M +KG P+ TY ++D + +++ +M
Sbjct: 706 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 765
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYK-----FMMKALSD 275
G+ PN Y L+ + G LD A + + M + A Y+ F + +
Sbjct: 766 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIES 825
Query: 276 GGKLDEI 282
G LDEI
Sbjct: 826 LGLLDEI 832
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 142/335 (42%), Gaps = 30/335 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE--KLGGVVSDGVVYGSLM--KG 56
M ++G P +++ L+ + GD ++L +++ + + G V ++ GS+ K
Sbjct: 322 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 381
Query: 57 YFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+ + A + Y+E + + V ++ + +S LC+ GK+++A + M +
Sbjct: 382 SLNFDLLDLAEKAYSEMLA--AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 439
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P + +++ + + C + + A +F +M D ++ ++D CK G++
Sbjct: 440 P-----DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 494
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A + + EM + G P+ TY L+ A + +V F M+ G PN+ Y+ L+
Sbjct: 495 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 554
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+ G +++A F+ M + D F K D + + + G L DG
Sbjct: 555 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYF--KQYDDNSERPNV--VTYGALLDG--- 607
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEKKEREKAE 331
K R EE KL++ E E
Sbjct: 608 ------------FCKSHRVEEARKLLDAMSMEGCE 630
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 13/247 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+Y+ ++ G + G +D ++L + ++EK G + V Y +++ G+ M G E +E
Sbjct: 704 VIYTEMIDGLCKVGKTDEAYKLMQMMEEK--GCQPNVVTYTAMIDGFGMIGKIETCLELL 761
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E +G + V + V ++D C NG D A L + MK H P + + +
Sbjct: 762 -ERMG-SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP-----THTAGYRKV 814
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ F +++ + ++G+ +P + LID L K L A L E++
Sbjct: 815 IEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 872
Query: 191 NPDEY--TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+Y TY L+++ N+V+ F +M G+ P + + L+ L + + EA
Sbjct: 873 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 932
Query: 249 KSFFDIM 255
D +
Sbjct: 933 LLLLDFI 939
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 123/322 (38%), Gaps = 51/322 (15%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-----GVVSDGVVYGSLMKGYFMK 60
FV D V Y+ L+ G LFEE + L + + V Y +L+ G K
Sbjct: 257 FVPDTVFYTKLISGLCEAS-------LFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 309
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
N + E S NS++ A C +G A KL +M + P +
Sbjct: 310 KQLGRCKRVLNMMMMEGCYP--SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 367
Query: 121 AVN----------------------------------LGSFNV--MADGYCGQGRFKDAI 144
N L NV C G+++ A
Sbjct: 368 VYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 427
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
V R+M PDT +++ +++ LC + A L+ EM G+ D YTY +++D+
Sbjct: 428 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 487
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD- 263
+ ++ +F +M + G PN+ Y L+ ++ + A F+ M+ + + +
Sbjct: 488 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 547
Query: 264 ASYKFMMKALSDGGKLDEILEI 285
+Y ++ G++++ +I
Sbjct: 548 VTYSALIDGHCKAGQVEKACQI 569
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 68/202 (33%), Gaps = 37/202 (18%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N ++ C NG F AL+ R+K+ P R ++N + + R A +
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSR-----STYNCLIQAFLKADRLDSASLIH 217
Query: 148 RKMG---------EYRC-----------------------SPDTLSFNNLIDQLCKNGML 175
R+M RC PDT+ + LI LC+ +
Sbjct: 218 REMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLF 277
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
EA + M P+ TY L+ C ++ M+ G P+ ++N L
Sbjct: 278 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 337
Query: 236 VGKLVQVGMLDEAKSFFDIMVK 257
V G A MVK
Sbjct: 338 VHAYCTSGDHSYAYKLLKKMVK 359
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 4/163 (2%)
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
N L+ + C+NG + A E G + D P TY L+ A + +R+D + R+M
Sbjct: 162 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 221
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ LR + L +VG EA + + + D Y ++ L + +E
Sbjct: 222 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENFVPDTVFYTKLISGLCEASLFEE 279
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKE--GREEEVVKLM 322
++ + + + + G L+K+ GR + V+ +M
Sbjct: 280 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 322
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 80/219 (36%), Gaps = 47/219 (21%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V ++ LC F+EA+ +RM+ P N+ +++ + G + +
Sbjct: 261 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP-----NVVTYSTLLCGCLNKKQLGRC 315
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
V M C P FN+L+ C +G Y Y LL
Sbjct: 316 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSG------------------DHSYAYKLL--- 354
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL------VQVGMLDEA-KSFFDIMV 256
+KMV G P VYN L+G + + +LD A K++ +++
Sbjct: 355 --------------KKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLA 400
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+ ++ + + L GK ++ ++ ++ G I
Sbjct: 401 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 439
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 146/294 (49%), Gaps = 13/294 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + V ++ + + G D L E++ E G V Y +L+ G+ ++
Sbjct: 373 MVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEY--GCSVGIVTYNALVNGFCVQ 430
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+E +N E +++ + ++L LC+ + D A +L M P
Sbjct: 431 GRVDSALELFNSLPCEPNTITYT-----TLLTGLCHAERLDAAAELLAEMMQNDCP---- 481
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N+ +FNV+ +C +G ++AIE+ ++M E+ C+P+ ++FN L+D + ++ EA E
Sbjct: 482 -LNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALE 540
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L + KG++ D TY ++D +R+++ F + D G+RP +YN+++ L
Sbjct: 541 LLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALC 600
Query: 241 QVGMLDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ D A FF MV M ++++Y +++ L+ G L E ++ + G
Sbjct: 601 KRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRG 654
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 126/296 (42%), Gaps = 19/296 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ ++ G R+ D ++ L G D V Y +++KG
Sbjct: 198 MRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSY--GFQPDTVSYTTVLKGLCAA 255
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL----CNNGKFDEALKLFDRMKNEHNP 116
E+ + E V N V N D L C G + A+++ DRM +EH
Sbjct: 256 KRWEDVEVLFCEMVENN------CVPNEVTFDMLVRFFCRGGMVERAIEVLDRM-SEHG- 307
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
N N++ + C QGR DA E MG Y CSPDT+S+ ++ LC+ G
Sbjct: 308 ---CTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWE 364
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A+EL EM K P+E T+ + + +D +M + G + YN LV
Sbjct: 365 DAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALV 424
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
G +D A F+ + + + +Y ++ L +LD E++ ++ +
Sbjct: 425 NGFCVQGRVDSALELFNSL--PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQN 478
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 127/293 (43%), Gaps = 14/293 (4%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
RL E + G D + L++ +G +A A E S + A N++
Sbjct: 56 RLVERSTSR--GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTA--EGSGAPVDVFAYNTL 111
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ C G+ D A +L M PP + ++ + G C +GR DA+ + M
Sbjct: 112 VAGYCRYGRLDAARRLIASMPV---PP-----DAYTYTPLIRGLCDRGRVGDALSLLDDM 163
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
C P +++ L++ +CK+ +A ++ EM KG P+ TY ++++ +RV
Sbjct: 164 LRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRV 223
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFM 269
DD ++ G +P+ Y ++ L ++ + F MV+ ++ ++ +
Sbjct: 224 DDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDML 283
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
++ GG ++ +E++ + + G + L V + K+GR ++ + +
Sbjct: 284 VRFFCRGGMVERAIEVLDR-MSEHGCTANTTLCNIVINSICKQGRVDDAFEFL 335
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 9/180 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ L+ F + G + L +++ E G + + + +L+ G EEA+E
Sbjct: 485 VTFNVLVSFFCQKGFVEEAIELVQQMMEH--GCTPNLITFNTLLDGITEDCNSEEALELL 542
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ V + + + + +S++D L + +EA+++F +++ PK + +N +
Sbjct: 543 HGLVSKG--ISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVM-----YNKI 595
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
C + AI+ F M C P+ ++ LI+ L + G+L EA + E+ +GV
Sbjct: 596 LSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
LAEA L + +G PD Y L+ R D A R SG ++ YN
Sbjct: 51 LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
LV + G LD A+ M + D +Y +++ L D G++ + L ++ +L
Sbjct: 111 LVAGYCRYGRLDAARRLIASM--PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDML 164
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 150/331 (45%), Gaps = 47/331 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF+ D YS ++ D F LFEE+K VV D Y L+ +
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKS--NHVVPDVFTYTILIDSFCKV 528
Query: 61 GMEEEAMECYNEAVGENSSV----------------KMSA-----------------VAN 87
G+ ++A + ++E V + + KMS+ V
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPP-----------KRLAVNLGSFNVMADGYCG 136
+++D C +G+ ++A +++ RM+ + P N+ ++ + DG C
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCK 648
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
+ K+A ++ M C P+ + ++ LID CK G L EA+ ++ +MS++G P+ YT
Sbjct: 649 AHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT 708
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
Y L+D F+ R+D +M+++ PN+ +Y ++ L +VG DEA +M
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768
Query: 257 KK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+K + +Y M+ GK+D+ LE++
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELM 799
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 21/269 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK-------LGGVVSDGVV---- 49
M +G + + V Y+ L+ G + G + +++ ++ + + DG +
Sbjct: 576 MLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPN 635
Query: 50 ---YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKL 106
YG+L+ G +EA + + V + + + ++++D C GK DEA +
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLD--VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 107 FDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
F +M P N+ +++ + D R A++V +M E C+P+ + + +I
Sbjct: 694 FTKMSERGYGP-----NVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
D LCK G EA L M +KG +P+ TY ++D + +VD R+M G
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCA 808
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
PN Y L+ G+LD+A D M
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 131/297 (44%), Gaps = 18/297 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G +++ L+ + R GD ++L +++ + G VVY L+ G +
Sbjct: 360 MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGD--CGCQPGYVVYNILIGG--IC 415
Query: 61 GMEE----EAMECYNEAVGE--NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH 114
G E+ + +E +A GE ++ V ++ V +++ LC GKF++A + M ++
Sbjct: 416 GNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKG 475
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
P + +++ + C + +A +F +M PD ++ LID CK G+
Sbjct: 476 FIP-----DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L +A + + EM G P+ TY L+ A + ++ F M+ G PN+ Y
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
L+ + G +++A + M + D F + DG D + G ++D
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGNADIPDVDMYF---KIDDGNIRDPNIFTYGALVD 644
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 145/327 (44%), Gaps = 21/327 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G + +VY L+ GF + G D +F ++ E+ G + Y SL+ F
Sbjct: 662 MSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER--GYGPNVYTYSSLIDRLFKD 719
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ A++ + + ENS + + ++D LC GK DEA +L M+ + P
Sbjct: 720 KRLDLALKVLSRML-ENSCAP-NVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP--- 774
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ M DG+ G+ +E+ R+MG C+P+ +++ LI+ C G+L +A +
Sbjct: 775 --NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQ 832
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNR---VDDGATYFRKMVDSGLRPNLAVYNRLVG 237
L EM Y +++ NR + G ++ ++ P + Y L+
Sbjct: 833 LLDEMKQTYWPKHMAGYRKVIEG---FNREFIISLGL--LDEIAENVAVPIIPAYRILID 887
Query: 238 KLVQVGMLDEAKSFFDIMVKKLKMDDAS---YKFMMKALSDGGKLDEILEIVGGILDDGG 294
+ G L+ A M A Y ++++LS K+D+ E+ ++ GG
Sbjct: 888 SFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGG 947
Query: 295 IEFSEELQEFVKGELSKEGREEEVVKL 321
I VKG L + R EE ++L
Sbjct: 948 IPELSIFFYLVKG-LIRINRWEEALQL 973
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 125/293 (42%), Gaps = 30/293 (10%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-----VYGSLMKGYFMKG 61
+ + V Y L+ G +R R K L ++++G ++ SL+ Y G
Sbjct: 331 IPNVVTYRILLCGCLRK-------RQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSG 383
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE------ALKLFDRMKNEHN 115
A + + + + V N ++ +C N K A K + M + H
Sbjct: 384 DYSYAYKLLKKM--GDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAH- 440
Query: 116 PPKRLAVNLGSFNV--MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
V L NV +A CG G+F+ A + R+M PDT +++ +I LC
Sbjct: 441 ------VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
+ A L+ EM V PD +TY +L+D+ +V + +F +MV G PN+ Y
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI 285
L+ ++ + A F++M+ + + + +Y ++ G++++ +I
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 122/265 (46%), Gaps = 13/265 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
++Y+ ++ G + G +D +RL ++EK G + V Y +++ G+ G ++ +E
Sbjct: 742 IIYTEMIDGLCKVGKTDEAYRLMSMMEEK--GCHPNVVTYTAMIDGFGKAGKVDKCLELM 799
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + V +++ C G D+A +L D MK + P ++ + +
Sbjct: 800 RQMGAKGCAPNF--VTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPK-----HMAGYRKV 852
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ F ++ + ++ E P ++ LID CK G L A EL+ EMS
Sbjct: 853 IEGF--NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTS 910
Query: 191 NP--DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D+ Y L+++ ++VD + M+ G P L+++ LV L+++ +EA
Sbjct: 911 YSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEA 970
Query: 249 KSFFDIMVKKLKMDDASYKFMMKAL 273
D + + + + ++S + A+
Sbjct: 971 LQLSDCICQMVHVSNSSSLILKHAI 995
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 93/226 (41%), Gaps = 15/226 (6%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
+S M + LC G++ EAL L ++ + ++ + M G C
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEK--------EEFKLDTVIYTQMISGLCE 311
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
F++A++ +M C P+ +++ L+ + L + + M +G P
Sbjct: 312 ASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI 371
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG------KLVQVGMLDEA-K 249
+ L+ A +KM D G +P VYN L+G KL + +L+ A K
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431
Query: 250 SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
++ +++ + ++ + + + L GK ++ I+ ++ G I
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 4/163 (2%)
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
N LI + C+NG+ A E G + D G P TY L+ E +R+D R+M
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
DSG + V L + G EA + + ++ K+D Y M+ L + +E
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIE--KEEFKLDTVIYTQMISGLCEASLFEE 317
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKE--GREEEVVKLM 322
++ + + I + + G L K GR + ++ +M
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMM 360
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL----------------------- 124
N ++ C NG ++ AL+ R+K+ P RL N
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 125 GSFNVMADGY---------CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
FN+ DGY C GR+++A+ + K E++ DT+ + +I LC+ +
Sbjct: 261 SGFNM--DGYTLGCFVHLLCKAGRWREALALIEK-EEFK--LDTVIYTQMISGLCEASLF 315
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
EA + M P+ TY +L+ C ++ M+ G P+ ++N L
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375
Query: 236 VGKLVQVG 243
+ + G
Sbjct: 376 IHAYCRSG 383
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
NV+ C G + A+E ++ + P L++N L+ + L A ++ EMS
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
D G N D YT G + + R + K + + +Y +++ L + + +
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFE 316
Query: 247 EAKSFFDIM 255
EA F M
Sbjct: 317 EAMDFLSRM 325
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRLAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 195 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDDANELFDEML-----VKGLVPNG 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A L E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 308 MSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGR 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 368 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V +GV + +L+ G+
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLVPNGVTFTTLIDGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 261 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 319 -----TYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 374 MLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E+
Sbjct: 75 FSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEIL 134
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP++ YN L+ +++G LD
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E M+ ++ D +Y ++ L K+D+ E+ +L G + +
Sbjct: 195 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 254
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 255 DGH-CKNGR 262
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 160/363 (44%), Gaps = 48/363 (13%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V+YS ++ G +D D + L+ E+ + G+ D + Y +L+ G+ + G EA
Sbjct: 148 PDVVMYSTIIDGLCKDKLVDEAYDLYSEMNAR--GIFPDVITYTTLICGFCLAGQLMEAF 205
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK--------- 118
NE + +N + + N+++D LC GK E+ L M + P
Sbjct: 206 GLLNEMILKN--INPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMD 263
Query: 119 -------------------RLAVN--LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
+ VN + S+N++ +G C R +A+ + R+M P
Sbjct: 264 GYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIP 323
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
DT+++++LID LCK G + +L EM +G + TY L+D + +D F
Sbjct: 324 DTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALF 383
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDG 276
KM + G++PN Y L+ L + G L + ++ F ++VK +D +Y M+ L
Sbjct: 384 MKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKE 443
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKARE 336
G DE L + + D+G I + + ++ L+EK E +KAE E
Sbjct: 444 GMFDEALAMKSKMEDNGCIPNAVTFEIIIRS-------------LLEKDENDKAEKLLHE 490
Query: 337 AEA 339
A
Sbjct: 491 MIA 493
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 145/324 (44%), Gaps = 10/324 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ + ++ + LM G G+ +++ + G D V YG L+ G G
Sbjct: 75 GYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQ--GFQMDQVSYGILLNGLCKIGETR 132
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ E+ S + V ++++D LC + DEA L+ M P ++
Sbjct: 133 CAIKLLRTI--EDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFP-----DV 185
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G+C G+ +A + +M +P+ ++N LID LCK G + E++ L
Sbjct: 186 ITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAV 245
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ KGV PD Y +LMD V V F MV +G+ P++ YN ++ L +
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKR 305
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+DEA + +++ K + D +Y ++ L G++ IL++ + G
Sbjct: 306 VDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNS 365
Query: 304 FVKGELSKEGREEEVVKLMEKKER 327
+ G + ++ + M+ KER
Sbjct: 366 LLDGLCKNQNLDKAIALFMKMKER 389
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 114/255 (44%), Gaps = 9/255 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V+YS LM G+ G+ ++F + + GV D Y ++ G
Sbjct: 249 KGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQT--GVNPDVYSYNIIINGLCKGKRV 306
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAM E + +N + V +S++D LC G+ L L M + P N
Sbjct: 307 DEAMNLLREMLHKN--MIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQP-----AN 359
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L ++N + DG C AI +F KM E P+ ++ LID LCK G L + + L+
Sbjct: 360 LVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQ 419
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ KG D +TY +++ + D+ KM D+G PN + ++ L++
Sbjct: 420 HLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKD 479
Query: 244 MLDEAKSFFDIMVKK 258
D+A+ M+ K
Sbjct: 480 ENDKAEKLLHEMIAK 494
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 11/222 (4%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+P VYSY ++ G + D L E+ K ++ D V Y SL+ G G
Sbjct: 286 VNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHK--NMIPDTVTYSSLIDGLCKLGRITT 343
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
++ E + V NS+LD LC N D+A+ LF +MK P +
Sbjct: 344 ILDLTKEMHHRGQPANL--VTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKY----- 396
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ + DG C GR K +F+ + D ++ +I LCK GM EA + +M
Sbjct: 397 TYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKM 456
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
D G P+ T+ +++ + E + D +M+ GL P
Sbjct: 457 EDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
K + +L + +++ + +C G+ + V K+ + P+T+ N L+ LC G + +
Sbjct: 39 KGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKK 98
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
+ + ++ +G D+ +YG+L++ ++ R + D RP++ +Y+ ++
Sbjct: 99 SLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIID 158
Query: 238 KLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
L + ++DEA + M + + D +Y ++ G+L E
Sbjct: 159 GLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLME 203
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
R P + F ++ L K L +M KG+ PD T +L++ + ++
Sbjct: 5 RHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFS 64
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKA 272
+ K++ G +PN + N L+ L G + ++ F D ++ + +MD SY ++
Sbjct: 65 FSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNG 124
Query: 273 LSDGG 277
L G
Sbjct: 125 LCKIG 129
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 147/294 (50%), Gaps = 11/294 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG D V Y+ L+ G + G+ + LF++++ + G+ + V Y +++ GY
Sbjct: 661 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR--GLTPNCVTYAAMVDGYCKS 718
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
A + E + V A N +L+ C KF++AL LF M K
Sbjct: 719 KNPTAAFQLLEEMLLR--GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE-----KGF 771
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A + SFN + +GYC G+ ++A + +M E + P+ +++ +LID CK GM+ EA+
Sbjct: 772 ASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKR 830
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM ++ V P TY L+ + + + + F +MV G+ P+ Y ++
Sbjct: 831 LWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYC 890
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G + EA D I+VK + M A+Y +++AL + E+L+++ I + G
Sbjct: 891 REGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESG 944
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 160/356 (44%), Gaps = 46/356 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G +P+ Y+ L+ GF+R GD + FR+ +E+ G+ ++ +++ +L+ G G E
Sbjct: 315 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVA--CGIEANLIIWNTLLNGVCKAGKME 372
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+E E + V+ + + +++ C A +L D MK ++LA +
Sbjct: 373 KALEIMQEMM--EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK-----RKLAPTV 425
Query: 125 GSFNVMADGYC-----------------------------------GQGRFKDAIEVFRK 149
+++V+ +G C +GR +++ + +
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M E PD +N+LI CK + EA EM ++ + P+ +TYG +D +
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 545
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKF 268
++ YF +M+ G+ PN+ +Y L+ + G + EA S F I+ +++ D +Y
Sbjct: 546 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 605
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ LS GK+ E I + + G + + + G K+G ++ +L+E+
Sbjct: 606 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS-CKQGNVDKASQLLEE 660
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 141/290 (48%), Gaps = 12/290 (4%)
Query: 46 DGVVYGSLMKGYFMKGMEEEAMECYNEAVG-ENSSVKMSAVANNSVLDALCNNGKFDEAL 104
+ V++ LM Y G EA+ N +G +N + S ++ NS+L L K +
Sbjct: 144 NSVIFDMLMDSYRKMGFLVEAV---NVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFW 200
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
K+FD M P ++ ++ M +C G KDA V +MGE CSP+ +++N
Sbjct: 201 KVFDGMCAHKVLP-----DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNV 255
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDS 223
+I LC+ +L EA EL M DKG+ PD YTY +L++ C E R + +M+D
Sbjct: 256 IIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCME-KRSREAKLMLLEMIDV 314
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEI 282
GL+P YN L+ ++ G +++A D MV ++ + + ++ + GK+++
Sbjct: 315 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 374
Query: 283 LEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
LEI+ +++ G S+ ++G + L E K+R+ A
Sbjct: 375 LEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPT 424
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 9/253 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G + VVY+ LM ++G + + E ++E+ G++ D Y SL+ G+
Sbjct: 451 MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ--GILPDVFCYNSLIIGFCKA 508
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA E + ++ +A + +D G+ + A + F+ M + P
Sbjct: 509 KRMEEARTYLMEML--ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP--- 563
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+G + + +G+C +G +A VFR + R D +++ LI L +NG + EA
Sbjct: 564 --NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 621
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ E+ +KG+ P+ +TY L+ + VD + +M G+ P++ YN L+ L
Sbjct: 622 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 681
Query: 241 QVGMLDEAKSFFD 253
+ G ++ AK+ FD
Sbjct: 682 KAGEIERAKNLFD 694
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 129/279 (46%), Gaps = 10/279 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ ++ G R D L + +K G+V D Y L+ G+ M+
Sbjct: 244 KGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDK--GLVPDLYTYDILINGFCMEKRS 301
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E + + +K + N+++D G ++A ++ D M + N
Sbjct: 302 REAKLMLLEMI--DVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV-----ACGIEAN 354
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +N + +G C G+ + A+E+ ++M E PD+ +++ LI+ C+ +A A EL
Sbjct: 355 LIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLD 414
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM + + P TY ++++ + R+MV +GL+PN VY L+ + G
Sbjct: 415 EMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEG 474
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDE 281
++E++ + M ++ + D Y ++ +++E
Sbjct: 475 RVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEE 513
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 11/271 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y + G+ + G+ + R F E+ GV+ + +Y +L++G+ +G EA +
Sbjct: 532 TYGAFIDGYSKAGEMEIADRYFNEMLS--CGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 589
Query: 72 EAVGENSSVKMSAVANNSVL-DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ S + V SVL L NGK EA +F ++ K L N ++N +
Sbjct: 590 FIL---SRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQE-----KGLLPNAFTYNSL 641
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C QG A ++ +M +PD +++N LID LCK G + A+ L+ ++ +G+
Sbjct: 642 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ TY ++D + +M+ G+ P+ +YN ++ + ++A
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 761
Query: 251 FFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
F M++K S+ +++ GKL E
Sbjct: 762 LFQEMLEKGFASTVSFNTLIEGYCKSGKLQE 792
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 10/271 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ YS ++ G R G+ G + E+ + G+ + VVY +LM + +G EE+
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMV--MNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 483
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ NS++ C + +EA M +RL N ++
Sbjct: 484 ERM--REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE-----RRLRPNAHTYGAF 536
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DGY G + A F +M P+ + LI+ CK G + EA ++ + + V
Sbjct: 537 IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 596
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
D TY +L+ ++ + F ++ + GL PN YN L+ + G +D+A
Sbjct: 597 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 656
Query: 251 FFDIM-VKKLKMDDASYKFMMKALSDGGKLD 280
+ M +K + D +Y ++ L G+++
Sbjct: 657 LLEEMCIKGINPDIVTYNILIDGLCKAGEIE 687
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 116/284 (40%), Gaps = 35/284 (12%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y+ ++ G+ + + F+L EE+ L GV D +Y ++ +
Sbjct: 699 RGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML--LRGVPPDAFIYNVILNFCCKEEKF 756
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------ 117
E+A++ + E + + + S V+ N++++ C +GK EA L + M + P
Sbjct: 757 EKALDLFQEMLEKGFA---STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYT 813
Query: 118 ---------------KRLAVNLGSFNVMA---------DGYCGQGRFKDAIEVFRKMGEY 153
KRL + + NVM GY G + +F +M
Sbjct: 814 SLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAK 873
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
PD +++ +ID C+ G + EA +L E+ KG+ Y L+ A + +
Sbjct: 874 GIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEV 933
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
++ +SG R L + + G +DEA MVK
Sbjct: 934 LKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVK 977
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 86/220 (39%), Gaps = 61/220 (27%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEA-------------------------------EELYGE 184
SP+++ F+ L+D K G L EA EL+ +
Sbjct: 142 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 201
Query: 185 MSD----KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ D V PD YTY ++ A +V V D +M + G PNL YN ++G L
Sbjct: 202 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLC 261
Query: 241 QVGMLDEAKSF---------------FDIMVKKLKMDDASY--KFMMKALSDGGKLDEIL 283
+ +LDEA +DI++ M+ S K M+ + D G E +
Sbjct: 262 RARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 321
Query: 284 E---IVGGILDDGGIEFSEELQEF-VKGELSKEGREEEVV 319
++ G + G IE Q F +K E+ G E ++
Sbjct: 322 TYNALIDGFMRQGDIE-----QAFRIKDEMVACGIEANLI 356
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 119 bits (297), Expect = 3e-24, Method: Composition-based stats.
Identities = 75/287 (26%), Positives = 140/287 (48%), Gaps = 11/287 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V YS L+ GF+R G + LF+E+ K G+ + V+ S+++G G +A+
Sbjct: 159 GDTVTYSTLISGFIRAGKILPAYELFDEMNRK--GLKAHAGVHKSILRGLCDAGQCSDAV 216
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E + + +V N++++ L + + D+A++L + M + P N+ S+
Sbjct: 217 LHFREM---SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAP-----NVFSY 268
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + G+C R ++A+ + +M C PD +S+ +I+ LCK + EA + +M
Sbjct: 269 NTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ 328
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G P+ TYG L+D V +D RKM + G RPN YN ++ + ++
Sbjct: 329 RGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMER 388
Query: 248 AKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
A +M++ DA +Y ++ GKL E +++ ++ G
Sbjct: 389 AHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435
Score = 111 bits (277), Expect = 7e-22, Method: Composition-based stats.
Identities = 71/270 (26%), Positives = 133/270 (49%), Gaps = 9/270 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ L+ G R GD + L +E+ GV + +++ ++KG + A+E + E
Sbjct: 880 FTILIHGLCRAGDIGTAYELLKEMPRH--GVPQNVILHNVVIKGLCSARKLDSALELFKE 937
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ E+ S ++++D+L +GK D+A +L + M ++ P N+ +++ +
Sbjct: 938 -MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSP-----NVVTYSSLLH 991
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G C G+ +A + ++M CSP+ +++N +ID CK G + EA L EM D G P
Sbjct: 992 GLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQP 1051
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+ TY +L+DA + + +D MV+ G PNL YN L+ + ++ A
Sbjct: 1052 NVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLL 1111
Query: 253 DIMVKKLKMDD-ASYKFMMKALSDGGKLDE 281
M++K + + SY ++ L K+ E
Sbjct: 1112 SSMIQKGCVPNVVSYNTVIAGLCKATKVHE 1141
Score = 103 bits (257), Expect = 1e-19, Method: Composition-based stats.
Identities = 77/327 (23%), Positives = 143/327 (43%), Gaps = 10/327 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + ++++ ++ G D LF+E++E G D Y +++ G +
Sbjct: 907 GVPQNVILHNVVIKGLCSARKLDSALELFKEMEES-GSCPPDVFTYSTIVDSLVKSGKVD 965
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + V + S + V +S+L LC GK DEA L RM P N+
Sbjct: 966 DACRLVEDMVSKGCSPNV--VTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP-----NI 1018
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG+C GR +A + +M + C P+ +++ L+D CK G +A L
Sbjct: 1019 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 1078
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +KG P+ +TY L+D + + V+ M+ G PN+ YN ++ L +
Sbjct: 1079 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 1138
Query: 245 LDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+ E + M+ + D ++ ++ A+ ++D E+ I + G
Sbjct: 1139 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 1198
Query: 304 FVKGELSKEGREEEVVKLMEKKEREKA 330
V G L K R ++ L+ + R++
Sbjct: 1199 LVHG-LCKSRRFDQAEYLLREMTRKQG 1224
Score = 100 bits (249), Expect = 1e-18, Method: Composition-based stats.
Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 19/322 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ G + G D + L EE+ + GG + V Y L+ + G E+A+
Sbjct: 1019 VTYNTIIDGHCKLGRIDEAYHLLEEMVD--GGCQPNVVTYTVLLDAFCKCGKAEDAIGLV 1076
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E + E V + NS+LD C + + A +L M + P N+ S+N +
Sbjct: 1077 -EVMVEKGYVP-NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP-----NVVSYNTV 1129
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C + + + + +M C PD ++FN +ID +CK + A EL+ + + G
Sbjct: 1130 IAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGC 1189
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMV-DSGLRPNLAVYNRLVGKLVQVGMLDEA- 248
P+ TY L+ + R D R+M G P++ YN ++ L + +D A
Sbjct: 1190 TPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAY 1249
Query: 249 KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE---ILEI-VGGILDDGGIEFSEELQEF 304
K F ++ L DD +Y ++ +L +DE +LE+ + D G I + + F
Sbjct: 1250 KLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGF 1309
Query: 305 VK-GELSKEGREEEVVKLMEKK 325
K G L K E+++L+ K
Sbjct: 1310 CKTGNLDK---ALEILQLLLSK 1328
Score = 99.8 bits (247), Expect = 2e-18, Method: Composition-based stats.
Identities = 83/344 (24%), Positives = 149/344 (43%), Gaps = 19/344 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + YS ++ GF + G L E++ + G D +L+
Sbjct: 396 MIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRR--GCRPDVACLSTLIDALCKA 453
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
+ A E ++G + + + VA + ++ ALC + EA D M KN P
Sbjct: 454 AAIDSAQELLRMSIGMDCAPDV--VAYSILIHALCKAKRLPEAESWLDVMVKNRCYP--- 508
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ ++N + DG C R DA +F +M PD ++++ +I CK+ L A
Sbjct: 509 ---DVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAF 565
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
++ M + PD TY L++ + VD F++M+ G PNL YN L+ L
Sbjct: 566 KMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGL 625
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
++ +++A +IM K+ D +Y ++ L + +L+E ++ + D G +
Sbjct: 626 CKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLP-- 683
Query: 299 EELQEFVKGELSKEGREEEVVKLMEK--KEREKAEAKAREAEAA 340
G L + ++ ++L+E+ KE E E A A
Sbjct: 684 ---DRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGA 724
Score = 97.8 bits (242), Expect = 8e-18, Method: Composition-based stats.
Identities = 73/309 (23%), Positives = 129/309 (41%), Gaps = 45/309 (14%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y+ ++ G + D RL EE+ + G + Y +++ G+ E A+
Sbjct: 229 DSVTYNTMINGLSKSDRLDDAIRLLEEMVDN--GFAPNVFSYNTVLHGFCKANRVENALW 286
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ V V+ +V++ LC + DEA ++ D+M P N+ ++
Sbjct: 287 LLEQMV--TRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQP-----NVITYG 339
Query: 129 VMADGYCGQGRFKDAIEVFRKMGE--YR-------------------------------- 154
+ DG+C G A+E+ RKM E YR
Sbjct: 340 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQT 399
Query: 155 -CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
C PD ++++ +I CK G L EA +L +M +G PD L+DA + +D
Sbjct: 400 GCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSA 459
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKA 272
R + P++ Y+ L+ L + L EA+S+ D+MVK + D +Y ++
Sbjct: 460 QELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDG 519
Query: 273 LSDGGKLDE 281
L ++++
Sbjct: 520 LCKSRRIND 528
Score = 85.9 bits (211), Expect = 3e-14, Method: Composition-based stats.
Identities = 75/299 (25%), Positives = 119/299 (39%), Gaps = 40/299 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V D V ++ ++ + D + LF ++E G + V Y SL+ G K
Sbjct: 1149 MLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES--GCTPNLVTYNSLVHG-LCK 1205
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM---------- 110
+ E + + N+V+D LC + + D A KLF +M
Sbjct: 1206 SRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 1265
Query: 111 --------------KNEHNPPKRLAVNLG------SFNVMADGYCGQGRFKDAIEVFRKM 150
+E N L + G ++ + DG+C G A+E+ + +
Sbjct: 1266 TYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLL 1325
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
PD ++F+ ID L K G L +A EL M G+ PD TY L+ + +
Sbjct: 1326 LSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLT 1385
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK-MDDASYKF 268
+D F M G P+ A Y LVG LV + KS+ D++ + K M D +K
Sbjct: 1386 EDAVDLFEVMRQCGCEPDNATYTTLVGHLV------DKKSYKDLLAEVSKSMVDTGFKL 1438
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 70/293 (23%), Positives = 116/293 (39%), Gaps = 51/293 (17%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF-- 127
Y E E + K++ VL + N D AL FD ++ N ++
Sbjct: 797 YAETALERFTGKLTTTVVGKVLQGVRNG---DAALGFFDWATSQE------GYNHDTYTC 847
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + R KDA++V+R + CSP+ +F LI LC+ G + A EL EM
Sbjct: 848 NCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPR 905
Query: 188 KGV------------------------------------NPDEYTYGLLMDACFEVNRVD 211
GV PD +TY ++D+ + +VD
Sbjct: 906 HGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVD 965
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
D MV G PN+ Y+ L+ L + G LDEA + M + + +Y ++
Sbjct: 966 DACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTII 1025
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
G++DE ++ ++ DGG + + + K G+ E+ + L+E
Sbjct: 1026 DGHCKLGRIDEAYHLLEEMV-DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 1077
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 42/232 (18%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN------- 191
++ A ++FR E + DT++++ LI + G + A EL+ EM+ KG+
Sbjct: 141 QYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHK 200
Query: 192 ---------------------------PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
PD TY +++ + +R+DD +MVD+G
Sbjct: 201 SILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 260
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
PN+ YN ++ + ++ A + MV + D SY ++ L ++DE
Sbjct: 261 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEAC 320
Query: 284 EIVGGILDDGG----IEFSEELQEFVK-GELSKEGREEEVVKLMEKKEREKA 330
++ ++ G I + + F + G+L +G E V K+ E+ R A
Sbjct: 321 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDL--DGAVELVRKMTERGYRPNA 370
Score = 46.2 bits (108), Expect = 0.028, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
N L++ L K ++A +L+ + D TY L+ ++ F +M
Sbjct: 130 NCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNR 189
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
GL+ + V+ ++ L G +A F M K D +Y M+ LS +LD+
Sbjct: 190 KGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDA 249
Query: 283 LEIVGGILDDG 293
+ ++ ++D+G
Sbjct: 250 IRLLEEMVDNG 260
Score = 43.9 bits (102), Expect = 0.14, Method: Composition-based stats.
Identities = 62/282 (21%), Positives = 113/282 (40%), Gaps = 35/282 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLM------ 54
M G V D V Y+ L+ GF ++ LFE +++ G D Y +L+
Sbjct: 1360 MLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQ--CGCEPDNATYTTLVGHLVDK 1417
Query: 55 KGY------FMKGMEEEAMECYNEAVGE-NSSVKMSAVAN--NSVLDALCNNGKFDEALK 105
K Y K M + + +E + +S+++ A +++D G +A K
Sbjct: 1418 KSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARK 1477
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
+F+ M N+ ++ M Y + + A ++R MG PD ++F +L
Sbjct: 1478 VFEGMDQR---------NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSL 1528
Query: 166 IDQLCKNGML-AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+ C G+L A +E D G+ P + ++D + V++ M+
Sbjct: 1529 LTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDL---MLGMP 1585
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASY 266
+P+ A +N L+ G + A + V +L ASY
Sbjct: 1586 CKPSAATWNCLLSAYKICGDFERA-----LRVAELNPTQASY 1622
>gi|255661022|gb|ACU25680.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 376
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 137/291 (47%), Gaps = 28/291 (9%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G+ D V ++E +K G V D + YG L+ G+ C NE
Sbjct: 62 FNIMMRGLFDNGEVDEVISIWELMKNS--GFVEDSITYGILVHGF-----------CKNE 108
Query: 73 AVGENSSV---------KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ ++ V + A A +++++ LC K D+A+ + + M PK
Sbjct: 109 YINKSLHVLEMAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPKAHV-- 166
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+N + +G G +F+DA VF +MG CSP +++N LI+ LCK EA +L
Sbjct: 167 ---YNALINGLVGASKFEDAFRVFHEMGTTHCSPTIVTYNTLINGLCKGERFGEAYDLVK 223
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +KG N TY LL+ ++V+ + ++ G +P++ ++N L+ L VG
Sbjct: 224 EMLEKGWNSSVITYSLLIKGLCLGHKVEMALQLWNQVTSKGFKPDVQMHNILIHGLCSVG 283
Query: 244 MLDEAKS-FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ A S +FDI + ++ +M+ G + L I IL +G
Sbjct: 284 KMQLALSLYFDINHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNG 334
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 131/281 (46%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ GF ++ + + E+ E+ GGV+ D Y +++ G + +
Sbjct: 89 GFVEDSITYGILVHGFCKNEYINKSLHVL-EMAERKGGVL-DAFAYSAMINGLCKEAKLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ N + S K A N++++ L KF++A ++F M H P +
Sbjct: 147 KAVSVLNGMI--KSGCKPKAHVYNALINGLVGASKFEDAFRVFHEMGTTHCSP-----TI 199
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C RF +A ++ ++M E + ++++ LI LC + A +L+ +
Sbjct: 200 VTYNTLINGLCKGERFGEAYDLVKEMLEKGWNSSVITYSLLIKGLCLGHKVEMALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V ++ + + + PNL +N L+ + G
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDINHWNCAPNLVTHNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ L+ D SY +K L ++ D IL
Sbjct: 320 IRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISDSIL 360
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 100/220 (45%), Gaps = 13/220 (5%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY+ L+ G V + FR+F E+ V Y +L+ G EA +
Sbjct: 166 VYNALINGLVGASKFEDAFRVFHEMGTT--HCSPTIVTYNTLINGLCKGERFGEAYDLVK 223
Query: 72 EAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
E + G NSSV + + ++ LC K + AL+L++++ ++ P ++ N+
Sbjct: 224 EMLEKGWNSSV----ITYSLLIKGLCLGHKVEMALQLWNQVTSKGFKP-----DVQMHNI 274
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ G C G+ + A+ ++ + + C+P+ ++ N L++ K+G + A ++ + G
Sbjct: 275 LIHGLCSVGKMQLALSLYFDINHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNG 334
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
+ PD +Y + + NR+ D + + + P +
Sbjct: 335 LQPDIISYNITLKGLCSCNRISDSILFLHDALTKKIVPTI 374
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 93/236 (39%), Gaps = 44/236 (18%)
Query: 95 CNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
C +G D A +++ + P + +N M +G+ GR KD E++ MG
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVV-----YNTMLNGFFRVGRIKDCFELWELMGR-E 54
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL-------------- 200
S + SFN ++ L NG + E ++ M + G D TYG+L
Sbjct: 55 GSRNVASFNIMMRGLFDNGEVDEVISIWELMKNSGFVEDSITYGILVHGFCKNEYINKSL 114
Query: 201 ------------MDA----------CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+DA C E ++D + M+ SG +P VYN L+
Sbjct: 115 HVLEMAERKGGVLDAFAYSAMINGLCKEA-KLDKAVSVLNGMIKSGCKPKAHVYNALING 173
Query: 239 LVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
LV ++A + F ++ +Y ++ L G + E ++V +L+ G
Sbjct: 174 LVGASKFEDAFRVFHEMGTTHCSPTIVTYNTLINGLCKGERFGEAYDLVKEMLEKG 229
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +VG + + +++M ++ + AS+ M
Sbjct: 6 IDGAERVYKEIVESKVSPDAVVYNTMLNGFFRVGRIKDCFELWELMGREGSRNVASFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE--GREEEVVKLMEKK 325
M+ L D G++DE++ I + + G +E S V G E + V+++ E+K
Sbjct: 66 MRGLFDNGEVDEVISIWELMKNSGFVEDSITYGILVHGFCKNEYINKSLHVLEMAERK 123
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + AE +Y E+ + V+PD Y +++ F V R+ D + M G R N+
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGFFRVGRIKDCFELWELMGREGSR-NV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGG 288
A +N ++ L G +DE S +++M ++D+ +Y ++ +++ L ++
Sbjct: 60 ASFNIMMRGLFDNGEVDEVISIWELMKNSGFVEDSITYGILVHGFCKNEYINKSLHVLEM 119
Query: 289 ILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
GG+ + + G L KE + ++ V ++ + + KA A
Sbjct: 120 AERKGGVLDAFAYSAMING-LCKEAKLDKAVSVLNGMIKSGCKPKAHVYNA 169
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 16/294 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VAD Y+ ++ F + G + + F E++E G + V Y +L+ Y
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV--GCTPNVVTYTALIHAYLKAKKVS 570
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------- 117
A E + + E + V ++++D C G+ ++A ++F+RM + P
Sbjct: 571 YANELFETMLSEGCLPNI--VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628
Query: 118 ----KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
N+ ++ + DG+C R ++A ++ M C P+ + ++ LID LCK G
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
L EA+E+ EMS+ G YTY L+D F+V R D + KM+++ PN+ +Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
++ L +VG DEA +M +K + + +Y M+ GK++ LE++
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 134/307 (43%), Gaps = 37/307 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG-------------------DSDGVFRLFEELKEKLG 41
M +G + + V YS L+ G + G D D F+ +++ E+
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER-- 636
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
+ V YG+L+ G+ EEA + + E + + + ++++D LC GK D
Sbjct: 637 ---PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC--EPNQIVYDALIDGLCKVGKLD 691
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EA ++ M +EH P L +++ + D Y R A +V KM E C+P+ +
Sbjct: 692 EAQEVKTEM-SEHGFP----ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ +ID LCK G EA +L M +KG P+ TY ++D + +++ +M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYK-----FMMKALSD 275
G+ PN Y L+ + G LD A + + M + A Y+ F + +
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIES 866
Query: 276 GGKLDEI 282
G LDEI
Sbjct: 867 LGLLDEI 873
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 142/335 (42%), Gaps = 30/335 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE--KLGGVVSDGVVYGSLM--KG 56
M ++G P +++ L+ + GD ++L +++ + + G V ++ GS+ K
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 57 YFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+ + A + Y+E + + V ++ + +S LC+ GK+++A + M +
Sbjct: 423 SLNCDLLDLAEKAYSEMLA--AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P + +++ + + C + + A +F +M D ++ ++D CK G++
Sbjct: 481 P-----DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A + + EM + G P+ TY L+ A + +V F M+ G PN+ Y+ L+
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+ G +++A F+ M + D F K D + + + G L DG
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYF--KQYDDNSERPNV--VTYGALLDG--- 648
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEKKEREKAE 331
K R EE KL++ E E
Sbjct: 649 ------------FCKSHRVEEARKLLDAMSMEGCE 671
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 13/247 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+Y+ ++ G + G +D ++L + ++EK G + V Y +++ G+ M G E +E
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEK--GCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E +G + V + V ++D C NG D A L + MK H P + + +
Sbjct: 803 -ERMG-SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP-----THTAGYRKV 855
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ F +++ + ++G+ +P + LID L K L A L E++
Sbjct: 856 IEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913
Query: 191 NPDEY--TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+Y TY L+++ N+V+ F +M G+ P + + L+ L + + EA
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Query: 249 KSFFDIM 255
D +
Sbjct: 974 LLLLDFI 980
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 123/322 (38%), Gaps = 51/322 (15%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-----GVVSDGVVYGSLMKGYFMK 60
FV D V Y+ L+ G LFEE + L + + V Y +L+ G K
Sbjct: 298 FVPDTVFYTKLISGLCEAS-------LFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 350
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
N + E S NS++ A C +G A KL +M + P +
Sbjct: 351 KQLGRCKRVLNMMMMEGCYP--SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 121 AVN----------------------------------LGSFNV--MADGYCGQGRFKDAI 144
N L NV C G+++ A
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
V R+M PDT +++ +++ LC + A L+ EM G+ D YTY +++D+
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD- 263
+ ++ +F +M + G PN+ Y L+ ++ + A F+ M+ + + +
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 264 ASYKFMMKALSDGGKLDEILEI 285
+Y ++ G++++ +I
Sbjct: 589 VTYSALIDGHCKAGQVEKACQI 610
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 68/202 (33%), Gaps = 37/202 (18%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N ++ C NG F AL+ R+K+ P R ++N + + R A +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSR-----STYNCLIQAFLKADRLDSASLIH 258
Query: 148 RKMG---------EYRC-----------------------SPDTLSFNNLIDQLCKNGML 175
R+M RC PDT+ + LI LC+ +
Sbjct: 259 REMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLF 318
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
EA + M P+ TY L+ C ++ M+ G P+ ++N L
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378
Query: 236 VGKLVQVGMLDEAKSFFDIMVK 257
V G A MVK
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVK 400
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 80/219 (36%), Gaps = 47/219 (21%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V ++ LC F+EA+ +RM+ P N+ +++ + G + +
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP-----NVVTYSTLLCGCLNKKQLGRC 356
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
V M C P FN+L+ C +G Y Y LL
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSG------------------DHSYAYKLL--- 395
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL------VQVGMLDEA-KSFFDIMV 256
+KMV G P VYN L+G + + +LD A K++ +++
Sbjct: 396 --------------KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+ ++ + + L GK ++ ++ ++ G I
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 4/163 (2%)
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
N L+ + C+NG + A E G + D P TY L+ A + +R+D + R+M
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ LR + L +VG EA + + + D Y ++ L + +E
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENFVPDTVFYTKLISGLCEASLFEE 320
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKE--GREEEVVKLM 322
++ + + + + G L+K+ GR + V+ +M
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 363
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 131/278 (47%), Gaps = 10/278 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ VKG D ++ L+ + GD RLFEE+K G D V Y L+
Sbjct: 396 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKS--SGCAPDEVTYNILIDHLCSM 453
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A++ E E++ S V N+++DALC + +EA ++FD+M + + R
Sbjct: 454 GKLVNALDLLKEM--ESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQM--DAHGISRS 509
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
AV +FN + DG C R DA E+ +M + P +++N+++ CK G L +A +
Sbjct: 510 AV---TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAAD 566
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M+ G D TYG L++ + R R M G+RP YN ++ L
Sbjct: 567 ILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLF 626
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGG 277
+ L +A S F M + + DA +YK + + L GG
Sbjct: 627 RRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGG 664
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 139/284 (48%), Gaps = 12/284 (4%)
Query: 9 DPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP V++Y ++ ++G+ D + ++ ++ G + D + +L+ + EEA
Sbjct: 332 DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDR--GCLPDTTTFNTLIVALCSQNRLEEA 389
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
++ E + S + N +++ALC G ++LF+ MK+ P + +
Sbjct: 390 LDLARELTVKGLSPDVYTF--NILINALCKVGDPHLGIRLFEEMKSSGCAPDEV-----T 442
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N++ D C G+ +A+++ ++M C T+++N +ID LCK + EAEE++ +M
Sbjct: 443 YNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMD 502
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G++ T+ L+D + R+DD +MV GL+P+ YN ++ + G L
Sbjct: 503 AHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLK 562
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
+A + M ++D +Y ++ L G+ L+++ G+
Sbjct: 563 KAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 606
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G AD VY++L+ + ++ E+ ++ G+ D V +L+K
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDR--GIQPDVVTLNTLIKALCRAHQVR 212
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ E + +V +++ G + AL++ +M P R+ VN
Sbjct: 213 TAVLMLEEM--SSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVN- 269
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
V+ +GYC GR +DA+ +K PD +++N + LC+NG ++ A ++
Sbjct: 270 ----VLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDL 325
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +G +PD +TY +++ + +D+ +MVD G P+ +N L+ L
Sbjct: 326 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNR 385
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGG 277
L+EA ++ VK L D ++ ++ AL G
Sbjct: 386 LEEALDLARELTVKGLSPDVYTFNILINALCKVG 419
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 108/265 (40%), Gaps = 15/265 (5%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A++ N A+ AV ++ L G FD L M+ E +
Sbjct: 70 EAALQMLNSALAREDFAPSRAVYE-EIIQKLGTAGAFDLMEGLVREMRREGH-----EAG 123
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFR-KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
G + Y RF DA+++ R ++ + DT +N+L++ L + + E +Y
Sbjct: 124 AGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVY 183
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM+D+G+ PD T L+ A ++V +M + P+ + L+ ++
Sbjct: 184 NEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEE 243
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG----GKLDEILEIVGGILDDGGIEFS 298
G ++ A + K ++ + + + L +G G++++ L + + DG
Sbjct: 244 GSIEAA---LRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQ 300
Query: 299 EELQEFVKGELSKEGREEEVVKLME 323
FV L + G +K+M+
Sbjct: 301 VTYNTFVHC-LCQNGHVSHALKVMD 324
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 165/357 (46%), Gaps = 44/357 (12%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G D V Y+ L+ G +DG + L + EK G V Y L+ G +G+
Sbjct: 167 HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEK--GEEPSNVTYNVLLSGLCKEGLV 224
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + + + K V N+++ LC+ GK DEALKLF+ M + N L N
Sbjct: 225 IDAFKILRMMIEKGK--KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC---LEPN 279
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN++ G C +GR A+++ RKM + + +++N L+ K G + EA EL+
Sbjct: 280 VFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWK 339
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++ D G P+ +TY +L+D ++ ++ F +M GL P L YN L+ L + G
Sbjct: 340 QVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 399
Query: 244 MLDEAKSFF----------DIM-----------------VKKLKM---------DDASYK 267
L++AKS F DI+ VK+L+M D ++
Sbjct: 400 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 459
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ LS G+LDE + ++ G + +KG LS +G E++ L+ +
Sbjct: 460 TLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG-LSSKGDTTEIINLLHQ 515
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 145/306 (47%), Gaps = 12/306 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V + LM G +DG D L E +K+K G +D V+YG+L+ G+ G +
Sbjct: 63 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKK--GFDADVVLYGTLISGFCNNGNLD 120
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++E +G+ S + V + ++ LC G++ EA + + M P ++
Sbjct: 121 RGKELFDEMLGKGISA--NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHP-----DV 173
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG C GR A+++ M E P +++N L+ LCK G++ +A ++
Sbjct: 174 VTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRM 233
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD--SGLRPNLAVYNRLVGKLVQV 242
M +KG D TY LM + +VD+ F M D + L PN+ +N L+G L +
Sbjct: 234 MIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE 293
Query: 243 GMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G L +A MVKK + +Y ++ GK+ E +E+ +LD G + S
Sbjct: 294 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTY 353
Query: 302 QEFVKG 307
+ G
Sbjct: 354 SILIDG 359
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 123/251 (49%), Gaps = 11/251 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF AD V+Y L+ GF +G+ D LF+E+ K G+ ++ V Y L+ G G
Sbjct: 97 KGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGK--GISANVVTYSCLVHGLCRLGQW 154
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA N A+ E+ + V ++D LC +G+ A+ L + M + P +
Sbjct: 155 KEANTVLN-AMAEH-GIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV--- 209
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++NV+ G C +G DA ++ R M E D +++N L+ LC G + EA +L+
Sbjct: 210 --TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 267
Query: 184 EMSD--KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M D + P+ +T+ +L+ + R+ RKMV G NL YN L+G ++
Sbjct: 268 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 327
Query: 242 VGMLDEAKSFF 252
G + EA +
Sbjct: 328 AGKIKEAMELW 338
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 7/237 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N VL LC NG EA+ L M + P ++ S+N + +G C + K+A+ +
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSP-----DIVSYNTLINGLCKAKKLKEAVGLL 56
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M C P++++ L+D LCK+G + EA EL M KG + D YG L+
Sbjct: 57 LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNN 116
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+D G F +M+ G+ N+ Y+ LV L ++G EA + + M + + D +Y
Sbjct: 117 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 176
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
++ L G+ ++++ ++ + G E S + L KEG + K++
Sbjct: 177 TGLIDGLCKDGRATHAMDLL-NLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILR 232
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 9 DPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+P V+++ ML G ++G ++ ++ +K G + V Y L+ G G +EA
Sbjct: 277 EPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK--GSCGNLVTYNMLLGGCLKAGKIKEA 334
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
ME + + + + ++ + ++D C + A LF M+ P L
Sbjct: 335 MELWKQVL--DLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPA-----LFD 387
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + C +G + A +F++MG C PD +SFN +ID K G +EL +M
Sbjct: 388 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV 447
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G+ PD T+ L++ ++ +D+ + +MV SG P+ VY+ L+ L G
Sbjct: 448 EMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT 507
Query: 247 EAKSFFDIMVKK 258
E + M K
Sbjct: 508 EIINLLHQMAAK 519
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 93/249 (37%), Gaps = 49/249 (19%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ L+ G ++ G L++++ + G V + Y L+ G+
Sbjct: 306 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL--GFVPNSFTYSILIDGFCKM 363
Query: 61 GMEEEA--MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
M A + C G N ++ N+++ +LC G ++A LF M N + P
Sbjct: 364 RMLNIAKGLFCEMRTHGLNPAL----FDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP- 418
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS----------------- 161
++ SFN M DG G F+ E+ KM E PD L+
Sbjct: 419 ----DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 474
Query: 162 ------------------FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+++L+ L G E L +M+ KG D ++
Sbjct: 475 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTC 534
Query: 204 -CFEVNRVD 211
C + VD
Sbjct: 535 LCHSIQEVD 543
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 163/357 (45%), Gaps = 48/357 (13%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V+SY L+ G + S L + + + G D V Y +++ G+F +G ++A
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGS 126
Y+E + + + + V +S++ ALC D+A+++ M KN P N +
Sbjct: 220 GTYHEML--DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP------NCRT 271
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + GYC G+ K+AI +KM PD +++N+L+D LCKNG EA +++ M+
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331
Query: 187 DKGVNPDEYTYGLLMD------ACFEVN-----------------------------RVD 211
+G+ P+ TYG L+ A E++ +VD
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
F KM GL P+ Y ++G L + G +++A +F+ M+ ++L + Y ++
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+L K D+ E++ +LD GI + KEGR E KL + R
Sbjct: 452 HSLCIFDKWDKAKELILEMLDR-GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 153/319 (47%), Gaps = 13/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V+S L+ + + G D +F +++++ G+ D V YG+++
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ--GLNPDTVTYGTVIGILCKS 422
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+AM + + + E S + NS++ +LC K+D+A +L M + + +
Sbjct: 423 GRVEDAMRYFEQMIDERLSP--GNIVYNSLIHSLCIFDKWDKAKELILEMLD-----RGI 475
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ FN + D +C +GR ++ ++F M PD ++++ LID C G + EA +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G+ PD TY L++ +++R++D FR+M SG+ P++ YN ++ L
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI-LDDGGIEFS 298
Q AK + I +++ ++Y ++ L DE L + + L D ++
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--LQLE 653
Query: 299 EELQEFVKGELSKEGREEE 317
+ G L K GR +E
Sbjct: 654 TRTFNIMIGALLKVGRNDE 672
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 138/329 (41%), Gaps = 45/329 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + V YS ++ + D + + + GV+ + Y S++ GY
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN--GVMPNCRTYNSIVHGYCSS 282
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + + V+ V NS++D LC NG+ EA K+FD M P+
Sbjct: 283 GQPKEAIGFLKKM--HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE-- 338
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ + GY +G + + M P+ F+ LI K G + +A
Sbjct: 339 ---ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M +G+NPD TYG ++ + RV+D YF +M+D L P VYN L+ L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 241 QVGMLDEAK-----------------------------------SFFDIMVK-KLKMDDA 264
D+AK FD+MV+ +K D
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y ++ GK+DE +++ ++ G
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 145/302 (48%), Gaps = 10/302 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+VY+ L+ D L E+ ++ G+ D + + S++ + +G E+ + +
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDR--GICLDTIFFNSIIDSHCKEGRVIESEKLF 502
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ V VK + ++++D C GK DEA KL M + P + ++N +
Sbjct: 503 DLMV--RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP-----DCVTYNTL 555
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+GYC R +DA+ +FR+M SPD +++N ++ L + A A+ELY +++ G
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+ TY +++ + N D+ F+ + + L+ +N ++G L++VG DEAK
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675
Query: 251 FFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
F + L D +Y M + L + G L+E+ ++ + ++G S L V+ L
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735
Query: 310 SK 311
+
Sbjct: 736 QR 737
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 137/314 (43%), Gaps = 40/314 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G D + ++ ++ ++G +S+ +F L + GV D + Y +L+ GY
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI-----GVKPDIITYSTLIDGY 524
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
+ G +EA + V + +K V N++++ C + ++AL LF M++ P
Sbjct: 525 CLAGKMDEATKLLASMV--SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 118 KRLAVN------------------------------LGSFNVMADGYCGQGRFKDAIEVF 147
+ N L ++N++ G C +A+ +F
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ + +T +FN +I L K G EA++L+ +S G+ PD TY L+ + E
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
+++ F M ++G N + N +V KL+Q G + A ++ ++ +K +AS
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTA 762
Query: 268 FMMKALSDGGKLDE 281
+ L GGK E
Sbjct: 763 SLFLDLLSGGKYQE 776
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 5/207 (2%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G C R DA++ V R+M + C P+ S+N L+ LC EA EL
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187
Query: 185 MSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M D G PD +Y +++ F+ +D + +M+D G+ PN+ Y+ ++ L +
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+D+A MVK M + +Y ++ G+ E + + + D G+E
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD-GVEPDVVT 306
Query: 302 QEFVKGELSKEGREEEVVKLMEKKERE 328
+ L K GR E K+ + +
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKR 333
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V P+ TYG+L+ +C R+D G ++ G R + +
Sbjct: 70 AAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAF 129
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLKM-----DDASYKFMMKALSDGGKLDEILEIVG 287
L+ L +A DI+++++ + SY ++K L D + E LE++
Sbjct: 130 TPLLKGLCADKRTSDA---MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQ 186
Query: 288 GILDDGG------IEFSEELQEFVK-GELSK 311
+ DDGG + ++ + F K G+L K
Sbjct: 187 MMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 14/284 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G AD V Y+ LM G + G +L E +K G D V Y S + G
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS--GCAPDVVAYSSFVYGLCKS 235
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A + + +S + V N++LD LC +GK D AL++ ++M +
Sbjct: 236 GKVLNAHQVLEQM--RDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDG----C 289
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N+ ++ + DG C GR ++A V M C PD +++++L++ LCK G + EA E
Sbjct: 290 GLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVE 349
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS-----GLRPNLAVYNRL 235
EM+ +G P+ TY L+ R+ + +M P+++ YN L
Sbjct: 350 AVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNAL 409
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
+G L + G +D+A FF M + D SY +++ L+ G+
Sbjct: 410 IGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 139/336 (41%), Gaps = 10/336 (2%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ L+ G + L ++ + G D V Y +L+ GY
Sbjct: 36 MAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKA 95
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EE+ E E + + ++ A+ V+ +LC + + EAL+L + M P
Sbjct: 96 GKVEESRELLKEVI--SRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCP--- 150
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
L +FN + G C + + A + + M D +++N L+D LCK G L EAE+
Sbjct: 151 --TLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQ 208
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G PD Y + + +V + +M DS PN+ YN ++ L
Sbjct: 209 LLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLC 268
Query: 241 QVGMLDEAKSFFDIMVKK--LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ G +D A + M ++ Y ++ L G+ E ++ + G
Sbjct: 269 KSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDV 328
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKA 334
V G L K G+ EE V+ + + E + A
Sbjct: 329 VTYSSLVNG-LCKAGKIEEAVEAVREMAMEGCKPNA 363
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V YS ++ G + G + + E + G D V Y SL+ G G EEA+E
Sbjct: 294 VGYSTVVDGLCKLGRTQEARSVMEAMAR--AGCRPDVVTYSSLVNGLCKAGKIEEAVEAV 351
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN-----EHNPPKRLAVNLG 125
E E K +AV S++ LC+ G+ EA ++ + M + +H PP ++
Sbjct: 352 REMAMEG--CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPP-----SVS 404
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++N + G C GR DA++ F++M C PD +S++ +++ L ++G +A
Sbjct: 405 TYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 133/322 (41%), Gaps = 41/322 (12%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G + V + +L+ G+ +G + ++ + V+ N +L+ LC ++
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARG--IQPNVVSYNGLLEGLCKLERWH 62
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EA +L M + R +L +++ + GYC G+ +++ E+ +++ PD L
Sbjct: 63 EAEELVRDMISRGG---RSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ ++ LCK+ L EA EL EM G P T+ L+ C ++ + + M
Sbjct: 120 YTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMA 179
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKL- 279
SG++ ++ YN L+ L + G L EA+ + M D +Y + L GK+
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239
Query: 280 --DEILE----------------IVGGILDDGGIEFSEELQEFVKGE------------- 308
++LE I+ G+ G I+ + E+ E +
Sbjct: 240 NAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299
Query: 309 ---LSKEGREEEVVKLMEKKER 327
L K GR +E +ME R
Sbjct: 300 VDGLCKLGRTQEARSVMEAMAR 321
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G P+ T+ L++ + R D M G++PN+ YN L+ L ++
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 245 LDEAKSFFDIMVK---KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
EA+ M+ + D +Y ++ GK++E E++ ++ G
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRG 112
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 149/331 (45%), Gaps = 11/331 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y ++ + D EE+ + G+ D +Y ++ G + EEA
Sbjct: 8 DALTYGPIVERLCKTKRIDDALATVEEMATR--GIKPDAFIYNFVLSGLCQEEKVEEARL 65
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + V + + + V N++++ LC + + A +LF M + P + S+N
Sbjct: 66 LFEKMVKQR--INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEV-----SYN 118
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ DG+C + A +VF KM C P+ +++ LID L K+G + A E+ M K
Sbjct: 119 TLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK 178
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
GV P+ TY L+D +V RVD+ +MV G+ P + YN L+ L + L++A
Sbjct: 179 GVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDA 238
Query: 249 KSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
F M ++ +Y +++AL +LD + ++ G + G
Sbjct: 239 FKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWG 298
Query: 308 ELSKEGREEEVVKLMEKKEREKAEAKAREAE 338
L++ G+ E +LMEK + K R ++
Sbjct: 299 -LTRAGKVHEAQELMEKMKLTKRNPFGRSSQ 328
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 133/288 (46%), Gaps = 12/288 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEEL-KEKLGGVVSDGVVYGSLMKGYFM 59
M +G D +Y++++ G ++ + LFE++ K+++ V V Y +L+ G
Sbjct: 35 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV---VTYNTLINGLCK 91
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
E A E + E G+ + V+ N+++D C A +FD+M + P
Sbjct: 92 AWRIETAYELFKEMAGKGYVP--TEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVP-- 147
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ ++ + DG G+ + A EV M + +P+ +++ LID CK + EA
Sbjct: 148 ---NVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAH 204
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L +M +G+ P TY +L+++ ++++D FR M P + YN L+ L
Sbjct: 205 KLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRAL 264
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
LD A + M+ K D +Y + L+ GK+ E E++
Sbjct: 265 CHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELM 312
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 37/205 (18%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
PD L++ ++++LCK + +A EM+ +G+ PD + Y ++ + +V++
Sbjct: 6 PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 65
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE---------------------------- 247
F KMV + PN+ YN L+ L + ++
Sbjct: 66 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125
Query: 248 -------AKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
AK FD MV+ + + +Y ++ LS GK+ E++ G++ G
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+ G K R +E KL+E+
Sbjct: 186 TYSCLIDG-FCKVRRVDEAHKLLEQ 209
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRIAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 177
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 178 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKIDDANELFDEM-----LVKGLVPNS 230
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A L E
Sbjct: 231 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 290
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +D + ++M+ R + VY L+ L + G
Sbjct: 291 MSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGX 350
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 351 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 384
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V + V + +L+ G+
Sbjct: 186 MLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVK--GLVPNSVTFTTLIDGHCKN 243
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 244 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKI 301
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C G A E ++M + D + + LI LC+ G +AE+
Sbjct: 302 -----TYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEK 356
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 357 MLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG V + V ++ L+ G ++G D +++++ + + D + Y +L+ G K
Sbjct: 221 MLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ--SLSPDLITYNTLIYGLCKK 278
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A +E +K + +++D C +G D A + RM E+ +
Sbjct: 279 GDLKQAHHLIDEM--SMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDV 336
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ + G C +G DA ++ R+M PD ++ +I++ CK G + + +
Sbjct: 337 V-----YTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSK 391
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L EM G P TY +LM+
Sbjct: 392 LLKEMQRDGHVPSVVTYNVLMN 413
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 2/193 (1%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+L F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 54 DLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 113
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
E+ + G Y + +LM + + + F + GLRP++ YN L+ +++
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 173
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G LDE M+ ++ D +Y ++ L K+D+ E+ +L G + S
Sbjct: 174 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTF 233
Query: 302 QEFVKGELSKEGR 314
+ G K GR
Sbjct: 234 TTLIDGH-CKNGR 245
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 149/331 (45%), Gaps = 11/331 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y ++ + D EE+ + G+ D +Y ++ G + EEA
Sbjct: 113 DALTYGPIVERLCKTKRIDDALATVEEMATR--GIKPDAFIYNFVLSGLCQEEKVEEARL 170
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + V + + + V N++++ LC + + A +LF M + P + S+N
Sbjct: 171 LFEKMVKQR--INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEV-----SYN 223
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ DG+C + A +VF KM C P+ +++ LID L K+G + A E+ M K
Sbjct: 224 TLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK 283
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
GV P+ TY L+D +V RVD+ +MV G+ P + YN L+ L + L++A
Sbjct: 284 GVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDA 343
Query: 249 KSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
F M ++ +Y +++AL +LD + ++ G + G
Sbjct: 344 FKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWG 403
Query: 308 ELSKEGREEEVVKLMEKKEREKAEAKAREAE 338
L++ G+ E +LMEK + K R ++
Sbjct: 404 -LTRAGKVHEAQELMEKMKLTKRNPFGRSSQ 433
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 133/288 (46%), Gaps = 12/288 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEEL-KEKLGGVVSDGVVYGSLMKGYFM 59
M +G D +Y++++ G ++ + LFE++ K+++ V V Y +L+ G
Sbjct: 140 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV---VTYNTLINGLCK 196
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
E A E + E G+ + V+ N+++D C A +FD+M + P
Sbjct: 197 AWRIETAYELFKEMAGKGYVP--TEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVP-- 252
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ ++ + DG G+ + A EV M + +P+ +++ LID CK + EA
Sbjct: 253 ---NVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAH 309
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L +M +G+ P TY +L+++ ++++D FR M P + YN L+ L
Sbjct: 310 KLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRAL 369
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
LD A + M+ K D +Y + L+ GK+ E E++
Sbjct: 370 CHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELM 417
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 45/321 (14%)
Query: 40 LGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK 99
L V+ + ++ G+ G E+ E Y V +++ S ++ LC G
Sbjct: 3 LRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYG--ILISCLCKVGN 60
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
FDEA KL M+ KR +++ + + C R ++A E+ KM Y PD
Sbjct: 61 FDEAYKLLHTMR-----LKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY-APPDA 114
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
L++ ++++LCK + +A EM+ +G+ PD + Y ++ + +V++ F K
Sbjct: 115 LTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEK 174
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDE-------------------------------- 247
MV + PN+ YN L+ L + ++
Sbjct: 175 MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 234
Query: 248 ---AKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
AK FD MV+ + + +Y ++ LS GK+ E++ G++ G
Sbjct: 235 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 294
Query: 304 FVKGELSKEGREEEVVKLMEK 324
+ G K R +E KL+E+
Sbjct: 295 LIDG-FCKVRRVDEAHKLLEQ 314
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M R P +FN + D K G L + +E+Y M + G YG+L+ +V
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
D+ M + Y+ ++ L ++ ++EA+ + M + D +Y +
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPI 120
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREK 329
++ L ++D+ L V + GI+ + FV L +E + EE L EK +++
Sbjct: 121 VERLCKTKRIDDALATVEE-MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 165/357 (46%), Gaps = 44/357 (12%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G D V Y+ L+ G +DG + L + EK G V Y L+ G +G+
Sbjct: 313 HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEK--GEEPSNVTYNVLLSGLCKEGLV 370
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + + + K V N+++ LC+ GK DEALKLF+ M + N L N
Sbjct: 371 IDAFKILRMMIEKGK--KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC---LEPN 425
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN++ G C +GR A+++ RKM + + +++N L+ K G + EA EL+
Sbjct: 426 VFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWK 485
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++ D G P+ +TY +L+D ++ ++ F +M GL P L YN L+ L + G
Sbjct: 486 QVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 545
Query: 244 MLDEAKSFF----------DIM-----------------VKKLKM---------DDASYK 267
L++AKS F DI+ VK+L+M D ++
Sbjct: 546 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 605
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ LS G+LDE + ++ G + +KG LS +G E++ L+ +
Sbjct: 606 TLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG-LSSKGDTTEIINLLHQ 661
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 145/306 (47%), Gaps = 12/306 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V + LM G +DG D L E +K+K G +D V+YG+L+ G+ G +
Sbjct: 209 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKK--GFDADVVLYGTLISGFCNNGNLD 266
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++E +G+ S + V + ++ LC G++ EA + + M P ++
Sbjct: 267 RGKELFDEMLGKGISA--NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHP-----DV 319
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG C GR A+++ M E P +++N L+ LCK G++ +A ++
Sbjct: 320 VTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRM 379
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD--SGLRPNLAVYNRLVGKLVQV 242
M +KG D TY LM + +VD+ F M D + L PN+ +N L+G L +
Sbjct: 380 MIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE 439
Query: 243 GMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G L +A MVKK + +Y ++ GK+ E +E+ +LD G + S
Sbjct: 440 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTY 499
Query: 302 QEFVKG 307
+ G
Sbjct: 500 SILIDG 505
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 135/288 (46%), Gaps = 14/288 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF AD V+Y L+ GF +G+ D LF+E+ K G+ ++ V Y L+ G G
Sbjct: 243 KGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGK--GISANVVTYSCLVHGLCRLGQW 300
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA N A+ E+ + V ++D LC +G+ A+ L + M + P +
Sbjct: 301 KEANTVLN-AMAEH-GIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV--- 355
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++NV+ G C +G DA ++ R M E D +++N L+ LC G + EA +L+
Sbjct: 356 --TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 413
Query: 184 EMSD--KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M D + P+ +T+ +L+ + R+ RKMV G NL YN L+G ++
Sbjct: 414 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 473
Query: 242 VGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
G + EA + + L + F L DG +L I G+
Sbjct: 474 AGKIKEAMELWK---QVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGL 518
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 7/237 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N VL LC NG EA+ L M + P ++ S+N + +G C + K+A+ +
Sbjct: 148 NIVLKGLCRNGGVFEAMGLIREMGRKSVSP-----DIVSYNTLINGLCKAKKLKEAVGLL 202
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M C P++++ L+D LCK+G + EA EL M KG + D YG L+
Sbjct: 203 LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNN 262
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+D G F +M+ G+ N+ Y+ LV L ++G EA + + M + + D +Y
Sbjct: 263 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 322
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
++ L G+ ++++ +++ G E S + L KEG + K++
Sbjct: 323 TGLIDGLCKDGRATHAMDLLNLMVEKGE-EPSNVTYNVLLSGLCKEGLVIDAFKILR 378
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 9 DPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+P V+++ ML G ++G ++ ++ +K G + V Y L+ G G +EA
Sbjct: 423 EPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK--GSCGNLVTYNMLLGGCLKAGKIKEA 480
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
ME + + + + ++ + ++D C + A LF M+ P L
Sbjct: 481 MELWKQVL--DLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPA-----LFD 533
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + C +G + A +F++MG C PD +SFN +ID K G +EL +M
Sbjct: 534 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV 593
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G+ PD T+ L++ ++ +D+ + +MV SG P+ VY+ L+ L G
Sbjct: 594 EMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT 653
Query: 247 EAKSFFDIMVKK 258
E + M K
Sbjct: 654 EIINLLHQMAAK 665
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
VN+ N++ G C G +A+ + R+MG SPD +S+N LI+ LCK L EA
Sbjct: 141 TVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVG 200
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM G P+ T LMD + R+D+ M G ++ +Y L+
Sbjct: 201 LLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFC 260
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
G LD K FD M+ K + + +Y ++ L G+ E ++ + + G
Sbjct: 261 NNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVV 320
Query: 300 ELQEFVKGELSKEGREEEVVKLM 322
+ G L K+GR + L+
Sbjct: 321 TYTGLIDG-LCKDGRATHAMDLL 342
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 93/249 (37%), Gaps = 49/249 (19%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ L+ G ++ G L++++ + G V + Y L+ G+
Sbjct: 452 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL--GFVPNSFTYSILIDGFCKM 509
Query: 61 GMEEEA--MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
M A + C G N ++ N+++ +LC G ++A LF M N + P
Sbjct: 510 RMLNIAKGLFCEMRTHGLNPAL----FDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP- 564
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS----------------- 161
++ SFN M DG G F+ E+ KM E PD L+
Sbjct: 565 ----DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 620
Query: 162 ------------------FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+++L+ L G E L +M+ KG D ++
Sbjct: 621 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTC 680
Query: 204 -CFEVNRVD 211
C + VD
Sbjct: 681 LCHSIQEVD 689
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+F +A+ +F ++ P + N L+D L ++ A +Y M+ V P +
Sbjct: 54 QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLS 113
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
L++ + + G ++ G N+ + N ++ L + G + EA M +K
Sbjct: 114 ALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK 173
Query: 259 -LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+ D SY ++ L KL E + ++ + G S + G L K+GR +E
Sbjct: 174 SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG-LCKDGRMDE 232
Query: 318 VVKLMEKKEREKAEA 332
++L+E +++ +A
Sbjct: 233 AMELLEAMKKKGFDA 247
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 131 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 189 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDDANELFDEML-----VKGLVPNG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +D + ++M+ +R + Y L L Q G
Sbjct: 302 MSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 395
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V +GV + +L+ G+
Sbjct: 197 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ L LC+ G +AE+
Sbjct: 313 -----TYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ PD TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 418
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 98/252 (38%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
J F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 66 JYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP++ YN L+ +++G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 185
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M+ ++ D +Y ++ L K+D+ E+ +L G +
Sbjct: 186 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 145/305 (47%), Gaps = 21/305 (6%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V + + V+YS ++ +DG LF E++EK G+ D Y S++ G+ G
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK--GIFPDLFTYNSMIVGFCSSGR 305
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A + E + + V N++++A GKF EA +L+D M P+ +
Sbjct: 306 WSDAEQLLQEML--ERKISPDVVTYNALINAFVKEGKFFEAAELYDEML-----PRGIIP 358
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N ++N M DG+C Q R A ++F M CSPD +F LID C + + EL
Sbjct: 359 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 418
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM +G+ + TY L+ V ++ ++M+ SG+ P++ N L+ L
Sbjct: 419 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 478
Query: 243 GMLDEAKSFFDIMVKKLKMD-DASYKFMMKALSDGGKLDEILE---IVGGILDDGGIEFS 298
G L +A F M +K KMD DAS+ F G ++L ++ G++++G +
Sbjct: 479 GKLKDALEMFKAM-QKSKMDLDASHPF-------NGVEPDVLTYNILICGLINEGKFLEA 530
Query: 299 EELQE 303
EEL E
Sbjct: 531 EELYE 535
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 144/321 (44%), Gaps = 44/321 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF + V ++ LM G R+G L + + E G+ + YG+++ G K
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED--GLQPTQITYGTIVDGMCKK 232
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A+ + + E S + + V ++++D+LC +G+ +A LF M+ + P
Sbjct: 233 GDTVSALNLLRK-MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP--- 288
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD---------------------- 158
+L ++N M G+C GR+ DA ++ ++M E + SPD
Sbjct: 289 --DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAE 346
Query: 159 -------------TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
T+++N++ID CK L AE+++ M+ KG +PD +T+ L+D
Sbjct: 347 LYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYC 406
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDA 264
R+DDG +M GL N YN L+ VG L+ A M+ + D
Sbjct: 407 GAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 466
Query: 265 SYKFMMKALSDGGKLDEILEI 285
+ ++ L D GKL + LE+
Sbjct: 467 TCNTLLDGLCDNGKLKDALEM 487
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 135/262 (51%), Gaps = 10/262 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D ++ L+ G+ D L E+ + G+V++ V Y +L+ G+ +
Sbjct: 386 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRR--GLVANTVTYNTLIHGFCLV 443
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEH 114
G A++ + + +S V V N++LD LC+NGK +AL++F M+ +
Sbjct: 444 GDLNAALDLSQQMI--SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 501
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
+P + ++ ++N++ G +G+F +A E++ +M PDT++++++ID LCK
Sbjct: 502 HPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L EA +++ M K +P+ T+ L++ + RVDDG F +M G+ + +Y
Sbjct: 562 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 621
Query: 235 LVGKLVQVGMLDEAKSFFDIMV 256
L+ +VG ++ A F M+
Sbjct: 622 LIYGFRKVGNINGALDIFQEMI 643
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 148/333 (44%), Gaps = 21/333 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + + Y+ ++ GF + D +F + K G D + +L+ GY
Sbjct: 351 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK--GCSPDVFTFTTLIDGYCGA 408
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++ ME +E + + V N+++ C G + AL L +M + P
Sbjct: 409 KRIDDGMELLHEM--PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP--- 463
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR-----------CSPDTLSFNNLIDQL 169
++ + N + DG C G+ KDA+E+F+ M + + PD L++N LI L
Sbjct: 464 --DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 521
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
G EAEELY EM +G+ PD TY ++D + +R+D+ F M PN+
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNV 581
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGG 288
+N L+ + G +D+ F M ++ + DA Y ++ G ++ L+I
Sbjct: 582 VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQE 641
Query: 289 ILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
++ G + ++ + G SKE E V L
Sbjct: 642 MISSGVYPDTITIRNMLTGFWSKEELERAVAML 674
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 119/266 (44%), Gaps = 36/266 (13%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ D V + +L+ G ++ EA++ +++ ++ + + V ++++ LC G+
Sbjct: 144 GLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF--ETTCRPNVVTFTTLMNGLCREGRIV 201
Query: 102 EALKLFDRMKNEHNPPKRLAV-------------------------------NLGSFNVM 130
EA+ L DRM + P ++ N+ ++ +
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
D C GR DA +F +M E PD ++N++I C +G ++AE+L EM ++ +
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+PD TY L++A + + + A + +M+ G+ PN YN ++ + LD A+
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 381
Query: 251 FFDIMVKKLKMDDASYKFMMKALSDG 276
F +M K D F L DG
Sbjct: 382 MFYLMATKGCSPDV---FTFTTLIDG 404
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 7/208 (3%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E ++ + N ++ C+ K AL F ++ P ++ +F + G C
Sbjct: 106 ERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP-----DVVTFTTLLHGLC 160
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+ R +A++ F +M E C P+ ++F L++ LC+ G + EA L M + G+ P +
Sbjct: 161 VEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVD-SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
TYG ++D + RKM + S + PN+ +Y+ ++ L + G +A++ F
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 255 MVKK-LKMDDASYKFMMKALSDGGKLDE 281
M +K + D +Y M+ G+ +
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSD 308
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
I +++KM + D SFN LI C L A +G+++ G++PD T+ L+
Sbjct: 98 VISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH 157
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+RV + +F +M ++ RPN+ + L+ L + G + EA + D M++ L+
Sbjct: 158 GLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
+Y ++ + G L ++ + + I + + + L K+GR + L
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 322 MEKKE 326
+ +
Sbjct: 278 FTEMQ 282
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 10/293 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF D V Y+ L+ G+ + G+ L E+ G+ D V Y SL+ G
Sbjct: 302 KGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLR--NGLPPDVVTYTSLINTMCKAGNL 359
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
AME +++ ++ + V S+++ G DEA +++D M PP
Sbjct: 360 NRAMEFFDQM--HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPP-----T 412
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + +G+C GR ++AI + R M SPD +S++ +I C+ L A ++
Sbjct: 413 IVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNA 472
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +KGV+PD TY L+ E R+++ F++M++ L P+ Y L+ + G
Sbjct: 473 EMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEG 532
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
L+EA + D M+KK D +Y ++ L+ + E ++ + D I
Sbjct: 533 DLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESI 585
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 8/250 (3%)
Query: 41 GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF 100
GV + Y L++G+ G E + + E E + + V N+V+ A C +
Sbjct: 197 SGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEM--ERNRCLPNVVTYNTVIGAYCKLKRI 254
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
DEA KL M E P NL ++N++ +G C GR ++ V +M +PD +
Sbjct: 255 DEAFKLLRSMGLEGLEP-----NLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGV 309
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N L++ CK G +A L+ EM G+ PD TY L++ + ++ +F +M
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
GLRPN Y L+ Q G +DEA +D M++ +Y ++ G++
Sbjct: 370 HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRM 429
Query: 280 DEILEIVGGI 289
+E + ++ G+
Sbjct: 430 EEAIGLLRGM 439
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 168/388 (43%), Gaps = 54/388 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V Y+ L+ + G+ + F+++ + G+ +GV Y SL+ G+ K
Sbjct: 334 MLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVR--GLRPNGVTYTSLINGFSQK 391
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
G +EA ++E + S + V N++L+ C +G+ +EA+ L M+ + P
Sbjct: 392 GFMDEAYRIWDEMI--RSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVV 449
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
K ++ + +++ + G C Q R +A ++F++M
Sbjct: 450 SYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEM 509
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
PD ++ +LI+ CK G L EA L+ EM KG PD TY +L++ + R
Sbjct: 510 LNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQART 569
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV---------------GMLDEAKSFFDIM 255
+ K+ PN Y+ L+ + G+++EA F+ M
Sbjct: 570 REAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESM 629
Query: 256 VKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
+K+ K ++A Y ++ G + + ++ ++D G I + + VK L EG
Sbjct: 630 IKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKA-LYSEGM 688
Query: 315 EEEVVKLMEKKEREKAEAKAREAEAAEA 342
+E++ ++ R K +AE ++A
Sbjct: 689 DEQLNLVIRDILR---SCKLSDAELSKA 713
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 136/306 (44%), Gaps = 25/306 (8%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V YS ++ GF R + D F++ E+ EK GV D + Y SL++G +
Sbjct: 442 KGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEK--GVSPDAITYSSLIQGLCEQRRL 499
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA + + E + N S+ S+++ C G +EAL L D M + P +
Sbjct: 500 NEACDLFQEML--NKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTV--- 554
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ--------------- 168
++NV+ +G Q R ++A + K+ P+ ++++ LI+
Sbjct: 555 --TYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKG 612
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
C G++ EA++++ M + P+E Y +++ V +++MVD G P+
Sbjct: 613 FCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPH 672
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASY-KFMMKALSDGGKLDEILEIVG 287
LV L GM ++ +++ K+ DA K +++ G +D + ++
Sbjct: 673 TVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLT 732
Query: 288 GILDDG 293
+ DG
Sbjct: 733 EMAKDG 738
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 1/150 (0%)
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
+V+R+M S + S+N LI C G L + EM P+ TY ++ A
Sbjct: 189 KVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAY 248
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
++ R+D+ R M GL PNL YN ++ L +VG ++E M +K D
Sbjct: 249 CKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDG 308
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y ++ G + L + +L +G
Sbjct: 309 VTYNTLVNGYCKVGNFHQALVLHSEMLRNG 338
>gi|255661024|gb|ACU25681.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 376
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 122/240 (50%), Gaps = 9/240 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D ++E +KE G V D YG L+ G+ G +++
Sbjct: 62 FNIIMRGLFDNGKVDEAVSIWELMKES--GFVEDSTTYGILVHGFCKNGHNNKSLHVLE- 118
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ E + A A +++++ LC K D+A+ + + M N P N +N + +
Sbjct: 119 -IAEQKGGVLDAFAYSAMINGLCKEAKLDKAISVLNSMTNNGCKP-----NAHVYNSLIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +++DAI F++MG CSP +++N LI+ LCK AEA +L +M +KG NP
Sbjct: 173 GLVGASKYEDAICAFQEMGNMDCSPTIVTYNXLINGLCKGERYAEAYDLVKQMLEKGFNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
TY L + +V+ ++K++ G +P++ ++N L+ L VG ++ A + +
Sbjct: 233 SVITYSSLFKGLCQGRKVEMALQLWKKVISKGFKPDVQMHNILIHGLCNVGKIELALALY 292
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 15/254 (5%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
V AV N++L+ + + + +L+D M E + + SFN++ G G+
Sbjct: 21 VSPDAVVYNTMLNGFFRSQRIKDCFELWDLMGREGSR------TVASFNIIMRGLFDNGK 74
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+A+ ++ M E D+ ++ L+ CKNG ++ + KG D + Y
Sbjct: 75 VDEAVSIWELMKESGFVEDSTTYGILVHGFCKNGHNNKSLHVLEIAEQKGGVLDAFAYSA 134
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKL 259
+++ + ++D + M ++G +PN VYN L+ LV ++A F M
Sbjct: 135 MINGLCKEAKLDKAISVLNSMTNNGCKPNAHVYNSLINGLVGASKYEDAICAFQEMG--- 191
Query: 260 KMDDA----SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
MD + +Y ++ L G + E ++V +L+ G KG +GR+
Sbjct: 192 NMDCSPTIVTYNXLINGLCKGERYAEAYDLVKQMLEKGFNPSVITYSSLFKGLC--QGRK 249
Query: 316 EEVVKLMEKKEREK 329
E+ + KK K
Sbjct: 250 VEMALQLWKKVISK 263
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/259 (18%), Positives = 99/259 (38%), Gaps = 40/259 (15%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V D YS ++ G ++ D + + G + VY SL+ G
Sbjct: 123 KGGVLDAFAYSAMINGLCKEAKLDKAISVLNSMTNN--GCKPNAHVYNSLINGLVGASKY 180
Query: 64 EEA---------MECYNEAVGENSSVK------------------------MSAVANNSV 90
E+A M+C V N + S + +S+
Sbjct: 181 EDAICAFQEMGNMDCSPTIVTYNXLINGLCKGERYAEAYDLVKQMLEKGFNPSVITYSSL 240
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
LC K + AL+L+ ++ ++ P ++ N++ G C G+ + A+ ++ M
Sbjct: 241 FKGLCQGRKVEMALQLWKKVISKGFKP-----DVQMHNILIHGLCNVGKIELALALYFGM 295
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
++CSP+ ++ N L++ K+G + ++ + + PD +Y + + NR+
Sbjct: 296 NRWKCSPNLVTLNTLMEGFYKDGDVRSGLVIWARILRNELKPDIISYNITLKGLCSCNRI 355
Query: 211 DDGATYFRKMVDSGLRPNL 229
+ + + P +
Sbjct: 356 SGAVLFLHDALGKNIFPTV 374
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 13/188 (6%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G + + L +++ EK G + Y SL KG E A++ +
Sbjct: 200 VTYNXLINGLCKGERYAEAYDLVKQMLEK--GFNPSVITYSSLFKGLCQGRKVEMALQLW 257
Query: 71 NEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + G V+M +N ++ LCN GK + AL L+ M P NL + N
Sbjct: 258 KKVISKGFKPDVQM----HNILIHGLCNVGKIELALALYFGMNRWKCSP-----NLVTLN 308
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ +G+ G + + ++ ++ PD +S+N + LC ++ A + K
Sbjct: 309 TLMEGFYKDGDVRSGLVIWARILRNELKPDIISYNITLKGLCSCNRISGAVLFLHDALGK 368
Query: 189 GVNPDEYT 196
+ P T
Sbjct: 369 NIFPTVIT 376
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V+++M E + SPD + +N +++ ++ + + EL+ M +G +
Sbjct: 1 CELGDISGAERVYKEMVERKVSPDAVVYNTMLNGFFRSQRIKDCFELWDLMGREG-SRTV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + + M +SG + Y LV + G +++ +I
Sbjct: 60 ASFNIIMRGLFDNGKVDEAVSIWELMKESGFVEDSTTYGILVHGFCKNGHNNKSLHVLEI 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
+K + DA +Y M+ L KLD+ + ++ + ++G + + G +
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEAKLDKAISVLNSMTNNGCKPNAHVYNSLINGLVGASK 179
Query: 314 REEEVVKLME 323
E+ + E
Sbjct: 180 YEDAICAFQE 189
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG 276
+++MV+ + P+ VYN ++ + + + +D+M ++ AS+ +M+ L D
Sbjct: 13 YKEMVERKVSPDAVVYNTMLNGFFRSQRIKDCFELWDLMGREGSRTVASFNIIMRGLFDN 72
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
GK+DE + I + + G +E S V G K G + + ++E E++
Sbjct: 73 GKVDEAVSIWELMKESGFVEDSTTYGILVHG-FCKNGHNNKSLHVLEIAEQK 123
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 139/286 (48%), Gaps = 13/286 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVG--ENSSVKMSAVANNSVLDALCNNGK 99
G + V Y +L+ + G E +A E VG V+ S V N+V++ LC G+
Sbjct: 185 GCAPNVVTYNTLVAAFCRAG-EVDAAE---RLVGVMREGGVRPSLVTFNTVVNGLCKAGR 240
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
++A K+FD M E P + S+N + GYC G +A+ VF +M + PD
Sbjct: 241 MEDARKMFDEMAREGLTPDGV-----SYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDV 295
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
++F +LI +C+ G L A L G+M ++G+ +E+T+ L+D +DD ++
Sbjct: 296 VTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKE 355
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGK 278
M + ++P++ YN L+ ++G +DEA+ M K +K D +Y ++ G
Sbjct: 356 MRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGD 415
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
D E+ +L G + + ++G L +E R + +L EK
Sbjct: 416 TDSAFELNRKMLKKGVVPDAITYSSLIRG-LCEERRLGDACELFEK 460
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 131/279 (46%), Gaps = 10/279 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y+ L+ G+ + G +F E+ +K GVV D V + SL+ G
Sbjct: 254 EGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQK--GVVPDVVTFTSLIHAMCRAGNL 311
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A+ + ++M+ +++D C NG D+AL M+ R+ +
Sbjct: 312 ERAVALVGQM--RERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRE-----CRIQPS 364
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +NV+ +GYC GR +A E+ +M PD ++++ ++ CK G A EL
Sbjct: 365 VVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNR 424
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M KGV PD TY L+ E R+ D F KM+ GL+P+ Y L+ + G
Sbjct: 425 KMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEG 484
Query: 244 MLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDE 281
+ +A S D M+KK + D +Y ++ LS + E
Sbjct: 485 NVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKE 523
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 132/273 (48%), Gaps = 10/273 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V D V ++ L+ R G+ + L +++E+ G+ + + +L+ G+
Sbjct: 286 MAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRER--GLRMNEFTFTALIDGFCRN 343
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ E ++ S V N +++ C G+ DEA +L M+ + P
Sbjct: 344 GFLDDALLAMKEM--RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKP--- 398
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + GYC G A E+ RKM + PD +++++LI LC+ L +A E
Sbjct: 399 --DVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACE 456
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ +M G+ PDE+TY L+D + V + +M+ G+ P++ Y+ L+ L
Sbjct: 457 LFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLS 516
Query: 241 QVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKA 272
+ EA+ F + + D+ Y+ +M
Sbjct: 517 KSARTKEAQRLLFKLYYEDPVPDNIKYEALMHC 549
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 131/308 (42%), Gaps = 31/308 (10%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G+ + G D L E++ K G+ D V Y +++ GY G + A E
Sbjct: 366 VCYNVLINGYCKLGRMDEARELIHEMEAK--GMKPDVVTYSTILSGYCKIGDTDSAFELN 423
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + V A+ +S++ LC + +A +LF++M P ++ +
Sbjct: 424 RKML--KKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEF-----TYTTL 476
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DG+C +G + A+ + +M + PD ++++ LID L K+ EA+ L ++ +
Sbjct: 477 IDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDP 536
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD Y LM C F+ +V L+ G++++A
Sbjct: 537 VPDNIKYEALMHCCRTAE--------FKSVVA------------LLKGFSMKGLMNQADK 576
Query: 251 FFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
+ M+ + K+D + Y ++ GG + + L +L G S V+G L
Sbjct: 577 VYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRG-L 635
Query: 310 SKEGREEE 317
+EG E
Sbjct: 636 FEEGMTVE 643
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 33/235 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ L+ G ++G+ L +E+ +K GV+ D V Y L+ G
Sbjct: 461 MLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKK--GVLPDVVTYSVLIDGLSKS 518
Query: 61 GMEEEAMEC-----YNEAVGENSSVKMSAVANN----------SVLDALCNNGKFDEALK 105
+EA Y + V +N +K A+ + ++L G ++A K
Sbjct: 519 ARTKEAQRLLFKLYYEDPVPDN--IKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADK 576
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC--SPDTLSFN 163
++ M + H ++ ++V+ G+C G A+ +++ RC SP++ S
Sbjct: 577 VYQSMLDRH-----WKLDGSVYSVLIHGHCRGGNIMKALSFHKQL--LRCGFSPNSTSTI 629
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
+L+ L + GM EA+ + E+ + D T L+D +NR +G YF+
Sbjct: 630 SLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALID----LNR-KEGVGYFQ 679
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 37/174 (21%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGA 214
+P L++N ++ L + L A L M GV P+ YTY +L+ A C R +
Sbjct: 117 APSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALG 175
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALS 274
M +G PN+ YN LV + G +D A+
Sbjct: 176 VVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLV---------------------- 213
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
G++ +GG+ S V L K GR E+ K+ ++ RE
Sbjct: 214 -------------GVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMARE 254
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 18/258 (6%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D V + SL+ G+ + EEAM N+ V +K V +++D+LC NG +
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV--EMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
AL LFD+M+N P ++ + + +G C GR++DA + R M + + PD ++
Sbjct: 195 YALSLFDQMENYGIRP-----DVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY-----GLLMDACFEVNRVDDGATY 216
FN LID K G +AEELY EM + P+ +TY G M+ C VD+
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC-----VDEARQM 304
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSD 275
F M G P++ Y L+ + +D+A K F+++ K L + +Y +++
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 276 GGKLDEILEIVGGILDDG 293
GK + E+ ++ G
Sbjct: 365 VGKPNVAQEVFSHMVSRG 382
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 138/286 (48%), Gaps = 15/286 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V+Y+ ++ ++G + LF++++ G+ D V+Y SL+ G G
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY--GIRPDVVMYTSLVNGLCNSGRWR 229
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A +K + N+++DA GKF +A +L++ M P N+
Sbjct: 230 DADSLLRGMTKR--KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP-----NI 282
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + +G+C +G +A ++F M C PD +++ +LI+ CK + +A +++ E
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ + TY L+ +V + + F MV G+ PN+ YN L+ L G
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 245 LDEAKSFFDIMVKKLKMDDA-----SYKFMMKALSDGGKLDEILEI 285
+ +A F+ M K+ +MD +Y ++ L GKL++ L +
Sbjct: 403 VKKALMIFEDMQKR-EMDGVAPNIWTYNVLLHGLCYNGKLEKALMV 447
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 14/226 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V Y+ L+ GF + D ++F E+ +K G+ + + Y +L++G+ G
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK--GLTGNTITYTTLIQGFGQVGKP 368
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR---- 119
A E ++ V V + N +L LC NGK +AL +F+ M+ KR
Sbjct: 369 NVAQEVFSHMVSR--GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ------KREMDG 420
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+A N+ ++NV+ G C G+ + A+ VF M + +++ +I +CK G + A
Sbjct: 421 VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV 480
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
L+ + KGV P+ TY ++ F + FRKM + G+
Sbjct: 481 NLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 123/261 (47%), Gaps = 18/261 (6%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P +++Y L+ GF +G D ++F ++ K G D V Y SL+ G+ ++AM
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETK--GCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + E + + + +++ GK + A ++F M + PP N+ ++
Sbjct: 338 KIFYEM--SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP-----NIRTY 390
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYR---CSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
NV+ C G+ K A+ +F M + +P+ ++N L+ LC NG L +A ++ +
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + ++ TY +++ + +V + F + G++PN+ Y ++ L + G+
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGL 510
Query: 245 LDEAKSFFDIMVKKLKMDDAS 265
EA F +K+K D S
Sbjct: 511 KHEAHVLF----RKMKEDGVS 527
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 6/198 (3%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S + +L+ + KFD + L D H ++ +L + N++ + +C +
Sbjct: 71 SIIDFTKLLNVIAKMKKFDVVINLCD-----HLQIMGVSHDLYTCNLLMNCFCQSSQPYL 125
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A KM + PD ++F +LI+ C + EA + +M + G+ PD Y ++D
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKM 261
+ + V+ + F +M + G+RP++ +Y LV L G +A S M K K+K
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 262 DDASYKFMMKALSDGGKL 279
D ++ ++ A GK
Sbjct: 246 DVITFNALIDAFVKEGKF 263
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+F +A+++F M E R P + F L++ + K L + GV+ D YT
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
LLM+ + ++ +++ KM+ G P++ + L+ ++EA S + MV+
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 259 -LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+K D Y ++ +L G ++ L + +++ GI + + L GR +
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ-MENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 318 VVKLMEKKEREKAEA 332
L+ + K +
Sbjct: 231 ADSLLRGMTKRKIKP 245
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRIAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 195 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKIDDANELFDEML-----VKGLVPNS 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A L E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +D + ++M+ R + VY L+ L + G
Sbjct: 308 MSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQ 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 368 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V + V + +L+ G+
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVK--GLVPNSVTFTTLIDGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 261 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKI 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C G A E ++M + D + + LI LC+ G +AE+
Sbjct: 319 -----TYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 374 MLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG V + V ++ L+ G ++G D +++++ + + D + Y +L+ G K
Sbjct: 238 MLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ--SLSPDLITYNTLIYGLCKK 295
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A +E +K + +++D C +G D A + RM E+ +
Sbjct: 296 GDLKQAHHLIDEM--SMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDV 353
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ + G C +G+ DA ++ R+M PD ++ +I++ CK G + + +
Sbjct: 354 V-----YTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSK 408
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L EM G P TY +LM+
Sbjct: 409 LLKEMQRDGHVPSVVTYNVLMN 430
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 100/252 (39%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 12 NSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSD 71
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 72 LYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYE 131
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP++ YN L+ +++G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M+ ++ D +Y ++ L K+D+ E+ +L G + S
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFT 251
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 252 TLIDGH-CKNGR 262
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 163/349 (46%), Gaps = 17/349 (4%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
F + + Y+ ++ G + D LF+++ +K + D V YG+L+ G + +E
Sbjct: 201 FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDK--AIYPDVVTYGALIDGLGKQRRVKE 258
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A + + EA + + V N+++D LC G+ + AL L+D M E L ++
Sbjct: 259 AYDLFEEARAKGCHP--TVVTYNTMIDGLCKCGRIENALTLYDDMVRE----PHLKPDMF 312
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+++ + +G R + A E++ +M + CSPD +++N L+D LCK+G +A E++ +M
Sbjct: 313 TYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKM 372
Query: 186 SDKGV-NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
V +P+ TY +L+D +V+R+ D ++M L P+ + ++ KL +
Sbjct: 373 GVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESR 432
Query: 245 LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
+DEA F+ + K K D + M+ ++D+ ++ +LD G
Sbjct: 433 IDEAHELFESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTAL 492
Query: 305 VKGELSKEGR-------EEEVVKLMEKKEREKAEAKAREAEAAEAAKRS 346
V G + GR E++++ ER AE R +R
Sbjct: 493 VTG-FCRTGRYSDALIMYHEMIEMGFPPERHLAELVDRTRTDHPPPRRP 540
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 122/255 (47%), Gaps = 12/255 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V Y+ ++ G + G + L++++ + + D Y +L+ G +
Sbjct: 269 KGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVRE-PHLKPDMFTYSALINGLNLSNRG 327
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK--NEHNPPKRLA 121
E+A E Y E + S V N++LD LC +G D+A+++F +M N +P
Sbjct: 328 EKAYELYEEMLDTGCSP--DVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDP----- 380
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N+ ++ V+ D +C R DA+++ ++M PD ++F +I +LCK + EA EL
Sbjct: 381 -NVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHEL 439
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ E K PD + ++ ++ R+DD +M+DSG P LA Y LV +
Sbjct: 440 F-ESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCR 498
Query: 242 VGMLDEAKSFFDIMV 256
G +A + M+
Sbjct: 499 TGRYSDALIMYHEMI 513
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 123/251 (49%), Gaps = 12/251 (4%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
F D V Y+ LM GF + GD LF E+K+ V+ + +++G G
Sbjct: 133 FEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRS---HNIVLRGLCSGGKISM 189
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A E + + G S + ++ ++D LC + K D+A+ LF +M + K + ++
Sbjct: 190 AWEVFKDMSGIFSP---NLISYTIMIDGLCKSRKVDKAITLFKQMVD-----KAIYPDVV 241
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ + DG Q R K+A ++F + C P +++N +ID LCK G + A LY +M
Sbjct: 242 TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 301
Query: 186 -SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ + PD +TY L++ NR + + +M+D+G P++ YN L+ L + G
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGC 361
Query: 245 LDEAKSFFDIM 255
D+A F M
Sbjct: 362 EDKAMEIFRKM 372
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 122/243 (50%), Gaps = 12/243 (4%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
V+ N++++ G +AL LF MK+ +AV L S N++ G C G+ A
Sbjct: 138 VSYNTLMNGFFKAGDVKKALALFGEMKDSG-----IAV-LRSHNIVLRGLCSGGKISMAW 191
Query: 145 EVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
EVF+ M G + SP+ +S+ +ID LCK+ + +A L+ +M DK + PD TYG L+D
Sbjct: 192 EVFKDMSGIF--SPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDG 249
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK--KLKM 261
+ RV + F + G P + YN ++ L + G ++ A + +D MV+ LK
Sbjct: 250 LGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKP 309
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
D +Y ++ L+ + ++ E+ +LD G + G L K G E++ +++
Sbjct: 310 DMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDG-LCKSGCEDKAMEI 368
Query: 322 MEK 324
K
Sbjct: 369 FRK 371
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 12/252 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF D + Y L+ G +D LF ++ K G+ + Y SL+ G + G
Sbjct: 109 EGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAK--GISPNNFTYSSLIHGLCILGHW 166
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF---DEALKLFDRMKNEHNPPKRL 120
+EA+ + + + + + N+++DALC G D+A+ LF+ M + P +
Sbjct: 167 KEAIRLFYAMI--HRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTV 224
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + G C GR +DAI +F +M Y PD +++ L D LCKN LAEA
Sbjct: 225 -----TYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMV 279
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L + ++PD + Y ++MD ++ F K+ GL P++ Y ++ L
Sbjct: 280 LLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLC 339
Query: 241 QVGMLDEAKSFF 252
Q G+L EA F
Sbjct: 340 QQGLLAEASKLF 351
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 142/296 (47%), Gaps = 14/296 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ ++ L+ G +G +LF+++ + G D + YG+L+ G
Sbjct: 75 GYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE--GFQPDVLTYGTLINGLCKDRQLT 132
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ +++ + + + + +S++ LC G + EA++LF M + P +L
Sbjct: 133 EALSLFSDMLAKG--ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQL---- 186
Query: 125 GSFNVMADGYCGQGRFK---DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+FN + D C +G + A+ +F +M + PDT+++N LI LC G L +A L
Sbjct: 187 -TFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 245
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ EM G PD TY +L D + +R+ + + + + L P++ +Y+ ++ + +
Sbjct: 246 FHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCR 305
Query: 242 VGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
G L+ A+ F + K L D +Y M+ L G L E ++ G +D+ IE
Sbjct: 306 AGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGE-MDENDIE 360
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 88 NSVLDALCNNGKFDEALKLF-DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N ++++ C+ + A + D +K + P + +F + G C +G+ +A+++
Sbjct: 49 NILINSFCHLNRLGFAFSVLGDILKLGYQP------STATFTTLIRGLCVEGKIGEALQL 102
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F KM PD L++ LI+ LCK+ L EA L+ +M KG++P+ +TY L+
Sbjct: 103 FDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCI 162
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML---DEAKSFFDIMVKK-LKMD 262
+ + F M+ + P+ +N LV L + GM+ D+A F+ M ++ L D
Sbjct: 163 LGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPD 222
Query: 263 DASYKFMMKALSDGGKL 279
+Y ++ L G+L
Sbjct: 223 TVTYNTLIHGLCHVGRL 239
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 12/247 (4%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S V + +L ++ + L L+ +M + P N + N++ + +C R
Sbjct: 9 SIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPH-----NTYTLNILINSFCHLNRLGF 63
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A V + + P T +F LI LC G + EA +L+ +M+ +G PD TYG L++
Sbjct: 64 AFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLIN 123
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKM 261
+ ++ + + F M+ G+ PN Y+ L+ L +G EA F M+ +K+
Sbjct: 124 GLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMP 183
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDD----GGIEFSEELQEFVKGELSKEGREEE 317
D ++ ++ AL G + +I++ G+ ++ G I + + G L GR +
Sbjct: 184 DQLTFNTLVDALCKEGMI-QIMDKAMGLFEEMSQQGLIPDTVTYNTLIHG-LCHVGRLRD 241
Query: 318 VVKLMEK 324
+ L +
Sbjct: 242 AIALFHE 248
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 44/187 (23%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + D V Y+ L+ G G LF E+ VVYG +
Sbjct: 217 QGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM-----------VVYGQI---------- 255
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
V + D LC N + EA+ L ++ + P +
Sbjct: 256 ------------------PDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDP-----D 292
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++++ DG C G + A ++F K+ PD ++ +I+ LC+ G+LAEA +L+G
Sbjct: 293 IHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFG 352
Query: 184 EMSDKGV 190
EM + +
Sbjct: 353 EMDENDI 359
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 2/173 (1%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M R P + F+ L+ + + + LY +M G+ + YT +L+++ +NR
Sbjct: 1 MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKF 268
+ + ++ G +P+ A + L+ L G + EA FD M + + D +Y
Sbjct: 61 LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
++ L +L E L + +L G + + G L G +E ++L
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHG-LCILGHWKEAIRL 172
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 148/291 (50%), Gaps = 16/291 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + VVY+ ++ F R+G +D +L E+++E+ G+V D V + S + +G
Sbjct: 212 GVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREE--GLVPDIVTFNSRISALCKEGKVL 269
Query: 65 EAMECY-----NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+A + +E +G + +++ N +L C G ++A LF+ ++ +
Sbjct: 270 DASRIFSDMELDEYLG---LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD---- 322
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
V+L S+N+ G G+F +A V ++M + P S+N L+D LCK GML++A+
Sbjct: 323 -LVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ G M GV+PD TYG L+ V +VD + ++M+ + PN N L+ L
Sbjct: 382 TIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
+G + EA+ M +K +D + ++ L G+LD+ +EIV G+
Sbjct: 442 WNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 109/246 (44%), Gaps = 18/246 (7%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
+ +++L+ LC G+F EA LF M E P LA +N+ +C QG+ A
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLA-----YNIFIHHFCKQGKISSAF 579
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
V + M + C ++N+LI L + E L EM +KG++P+ TY +
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYL 639
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA 264
E +V+D +M+ + PN+ + L+G +V D A+ F+ V +
Sbjct: 640 CEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEG 699
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
Y M L G+L + E++ +LD G EL F+ +L VV L +K
Sbjct: 700 LYSLMFNELLAAGQLLKATELLEAVLDRGF-----ELGTFLYKDL--------VVSLCKK 746
Query: 325 KEREKA 330
E E A
Sbjct: 747 DELEVA 752
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 7/220 (3%)
Query: 62 MEEEAMECYNEAVGEN-SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M EE E +N + + K+S++ SV+ + D+A F +++ P +
Sbjct: 54 MHEEIEELHNLILSSSIQKTKLSSLL--SVVSIFAKSNHIDKAFPQFQFVRSRF-PENKP 110
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ L +NV+ + + R + +++ M SP+T +FN LI LC + + A E
Sbjct: 111 GIYL--YNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM +KG P+E+T+G+L+ + D G M G+ PN VYN +V
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
+ G D+++ + M ++ L D ++ + AL GK+
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 26/277 (9%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ + G VR G + +++ +K G+ Y LM G GM +A
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMIDK--GIGPSIYSYNILMDGLCKLGMLSDA----KT 382
Query: 73 AVG--ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
VG + + V AV +L C+ GK D A L M + P N + N++
Sbjct: 383 IVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP-----NAYTCNIL 437
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
GR +A E+ RKM E DT++ N ++D LC +G L +A E+ M G
Sbjct: 438 LHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG- 496
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
G L ++ + VDD ++++ P+L Y+ L+ L + G EAK+
Sbjct: 497 ---SAALGNLGNS--YIGLVDDS------LIENNCLPDLITYSTLLNGLCKAGRFAEAKT 545
Query: 251 FF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
F ++M +KL+ D +Y + GK+ ++
Sbjct: 546 LFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVL 582
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P Y Y +L+++C RV+ + ++ MV G+ P +N L+ L +D A+
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELS 310
FD M +K K ++ ++ +++ G D+ LE++ ++ G+ ++ + +
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNS-MESFGVLPNKVVYNTIVSSFC 228
Query: 311 KEGREEEVVKLMEKKERE 328
+EGR ++ KL+EK E
Sbjct: 229 REGRNDDSEKLVEKMREE 246
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 10/250 (4%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D + Y+ + F + G FR+ +++++K G Y SL+ G +K E
Sbjct: 557 PDSLAYNIFIHHFCKQGKISSAFRVLKDMEKK--GCHKSLETYNSLILGLGIKNQIFEIH 614
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+E + + N+ + LC GK ++A L D M K +A N+ SF
Sbjct: 615 GLMDEM--REKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQ-----KNIAPNVFSF 667
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ +C F A EVF C ++ + ++L G L +A EL + D
Sbjct: 668 KYLIGAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLD 726
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G + Y L+ + + + ++ + KM+D G + A ++ L ++G E
Sbjct: 727 RGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKE 786
Query: 248 AKSFFDIMVK 257
A +F + M++
Sbjct: 787 ANNFAEKMME 796
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 148/317 (46%), Gaps = 10/317 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V+Y+ L+ GF + G+ +RLF+E++++ + D + Y +++ G
Sbjct: 249 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKR--KISPDFITYTAVICGLCQT 306
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + ++E V + ++ V +++D C GK EA L ++M P
Sbjct: 307 GRVMEADKLFHEMVCKR--LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTP--- 361
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ +ADG C G A E+ +M + ++N+L++ LCK G + +A +
Sbjct: 362 --NIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 419
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M G +PD TY LMDA + + R+M+D L+P + +N L+
Sbjct: 420 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 479
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
GML++ + M++K M +A +Y ++K + EI G+ G +
Sbjct: 480 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGN 539
Query: 300 ELQEFVKGELSKEGREE 316
+KG +E
Sbjct: 540 TYNILIKGHCKARNMKE 556
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 124/254 (48%), Gaps = 16/254 (6%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+K + N V+ LC GK EA ++ M +E P + + + DG+C G
Sbjct: 219 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI-----YTTLIDGFCKLGN 273
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
A +F +M + + SPD +++ +I LC+ G + EA++L+ EM K + PDE TY
Sbjct: 274 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 333
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
L+D + ++ + + +M+ GL PN+ Y L L + G +D A M +K
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 393
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEI-----VGGILDDGGIEFSEELQEFVKGELSKEG 313
L+++ +Y ++ L G +D+ +++ V G D + ++ + + K S+E
Sbjct: 394 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD-AVTYTTLMDAYCK---SREM 449
Query: 314 -REEEVVKLMEKKE 326
R E+++ M +E
Sbjct: 450 VRAHELLRQMLDRE 463
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 10/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y+ L G + G+ D L E+ K G+ + Y SL+ G
Sbjct: 354 MLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK--GLELNIYTYNSLVNGLCKA 411
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A++ + E + AV +++DA C + + A +L +M + P
Sbjct: 412 GNIDQAVKLMKDM--EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP--- 466
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +FNV+ +G+C G +D ++ + M E P+ ++N+LI Q C + E
Sbjct: 467 --TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 524
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+Y M KGV PD TY +L+ + + + R MV G ++ YN L+
Sbjct: 525 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFY 584
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+ EA+ F+ M ++ L D Y D GK++ LE+
Sbjct: 585 KRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 630
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 7/227 (3%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
+ LKL + M+ K L N ++N + C G+ +A V R+M +PD +
Sbjct: 205 EWVLKLIEEMQ-----IKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGV 259
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+ LID CK G ++ A L+ EM + ++PD TY ++ + RV + F +M
Sbjct: 260 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 319
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
V L P+ Y L+ + G + EA S + M++ L + +Y + L G++
Sbjct: 320 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 379
Query: 280 DEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
D E++ + G+E + + L K G ++ VKLM+ E
Sbjct: 380 DTANELLHEMCRK-GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 425
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 153/357 (42%), Gaps = 46/357 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-----VYGSLMK 55
MF KG D +Y+ L+ G+ G E+ L +V +GV ++ +
Sbjct: 292 MFRKGIKPDVAIYAILLHGYATKGA-------LSEMHSFLDLMVGNGVSPNRRIFNIMFC 344
Query: 56 GYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
Y K M EEAM +N+ + V+ +++DALC G+ D+A+ F++M NE
Sbjct: 345 AYAKKAMIEEAMHIFNKM--RQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGV 402
Query: 116 PP------------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIE 145
P + + V+ FN + C +GR +A
Sbjct: 403 TPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQR 462
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+ M P+ +S+N L+ C G + EA +L M G+ P+E+TY +L+
Sbjct: 463 LIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYC 522
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDA 264
+ RVDD + FR+M+ G+ P +A YN ++ L Q G EA + M+ + K D
Sbjct: 523 KARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIY 582
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
+Y ++ L +DE ++ + + + G L K GR+E+ + L
Sbjct: 583 TYNIILNGLCKNNFVDEAFKMFRRLCSKDP-QLDSVTFNIMIGALLKGGRKEDAMDL 638
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 151/324 (46%), Gaps = 11/324 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ ++ G + D +F+++ ++ GV D Y L+ GY
Sbjct: 187 MMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDR--GVKPDNGTYNCLIHGYLST 244
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +E ++ E ++ + +LD LC NG+ EA FD M + P
Sbjct: 245 GKWKEVVQMLEEM--STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKP--- 299
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + ++ GY +G + M SP+ FN + K M+ EA
Sbjct: 300 --DVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMH 357
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M +G++PD ++G L+DA ++ RVDD F +M++ G+ PN+ V++ LV L
Sbjct: 358 IFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLC 417
Query: 241 QVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
VG ++A+ FF+++ + + +D + +M L + G++ E ++ ++ G
Sbjct: 418 TVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVI 477
Query: 300 ELQEFVKGELSKEGREEEVVKLME 323
V G GR +E KL++
Sbjct: 478 SYNTLVAGH-CLTGRIDEAAKLLD 500
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 125/253 (49%), Gaps = 8/253 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D V Y +++ G+F +G E+A + E + + + + V +V+D LC D
Sbjct: 156 GCPPDVVAYNTVINGFFREGQVEKAYNLFLEMM--DQGIPPNVVTYTTVIDGLCKAQVVD 213
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
A +F +M + P G++N + GY G++K+ +++ +M + PD ++
Sbjct: 214 RAKGVFQQMIDRGVKPDN-----GTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCIT 268
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ L+D LCKNG EA + M KG+ PD Y +L+ + + ++ MV
Sbjct: 269 YALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMV 328
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
+G+ PN ++N + + M++EA F+ M ++ L D S+ ++ AL G++D
Sbjct: 329 GNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVD 388
Query: 281 EILEIVGGILDDG 293
+ + ++++G
Sbjct: 389 DAVLQFNQMINEG 401
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 144/319 (45%), Gaps = 15/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V+S L+ G G + LF E+ ++ G+ D V + +LM +
Sbjct: 397 MINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQ--GICVDAVFFNTLMCNLCNE 454
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + + V+ + ++ N+++ C G+ DEA KL D M + P
Sbjct: 455 GRVMEAQRLIDLMI--RVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEF 512
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ GYC R DA +FR+M +P ++N ++ L + G +EA E
Sbjct: 513 -----TYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANE 567
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY M + D YTY ++++ + N VD+ FR++ + + +N ++G L+
Sbjct: 568 LYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALL 627
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G ++A F I L D +Y+ + + L + G L E + + G S
Sbjct: 628 KGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSH 687
Query: 300 ELQEFV-----KGELSKEG 313
L V +G++S+ G
Sbjct: 688 MLNALVRRLLHRGDISRAG 706
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 7/207 (3%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
+S V +A + ++ C G+ + F + VN+ + + G C
Sbjct: 83 SSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTG-----WRVNVIVISQLLKGLCD 137
Query: 137 QGRFKDAIEVFR-KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
R +A ++ +M E+ C PD +++N +I+ + G + +A L+ EM D+G+ P+
Sbjct: 138 AKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVV 197
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
TY ++D + VD F++M+D G++P+ YN L+ + G E + M
Sbjct: 198 TYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM 257
Query: 256 -VKKLKMDDASYKFMMKALSDGGKLDE 281
L+ D +Y ++ L G+ E
Sbjct: 258 STHGLEPDCITYALLLDYLCKNGRCRE 284
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 9/278 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + Y+ L+ G G D +L + + G+ + Y L++GY
Sbjct: 467 MIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSN--GLKPNEFTYTILLRGYCKA 524
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A + E + + V N++L L G+F EA +L+ M N R
Sbjct: 525 RRVDDAYSLFREMLMK--GVTPVVATYNTILHGLFQTGRFSEANELYLNMINS-----RT 577
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N++ +G C +A ++FR++ D+++FN +I L K G +A +
Sbjct: 578 KCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMD 637
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ +S G+ PD TY L+ + E + + F M SG PN + N LV +L+
Sbjct: 638 LFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLL 697
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGK 278
G + A + + +K +AS M+ +L G+
Sbjct: 698 HRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGE 735
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 149/318 (46%), Gaps = 17/318 (5%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V ++ ++ + G D ++ + + E G + D V Y S++ G G ++A+
Sbjct: 300 PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEH--GCIPDIVTYSSILDGLCDVGRVDDAV 357
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E + ++ K +A +VL LC+ +++ A +L M PP + +F
Sbjct: 358 ELLSRL--KSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEV-----TF 410
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + C +G AI+V +M E C+PD +++N++ID LC + +A EL +
Sbjct: 411 NTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQS 470
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G PD T+ L+ V+R +D M+ S P+ +N ++ L Q G+L +
Sbjct: 471 YGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQ 530
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF-- 304
A IM + + ++Y ++ AL GK E L+++ G+ + + +L +
Sbjct: 531 AIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG-----TPDLITYNT 585
Query: 305 VKGELSKEGREEEVVKLM 322
V ++K G+ EE + L+
Sbjct: 586 VISNITKAGKMEEALDLL 603
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 150/358 (41%), Gaps = 46/358 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V Y+ L+ +GD D + +L G D V Y ++K
Sbjct: 223 MRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSH--GCKPDAVTYTPVLKSLCGS 280
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+E E + E + V N+++ +LC G D A+K+ D M P
Sbjct: 281 ERWKEVEELFAEMASNKCAPD--EVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP--- 335
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL-------------------- 160
++ +++ + DG C GR DA+E+ ++ Y C PDT+
Sbjct: 336 --DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEE 393
Query: 161 ---------------SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+FN +I LC+ G++ A ++ +MS+ G NPD TY ++D
Sbjct: 394 LMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLC 453
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDA 264
+DD + G +P++ +N L+ L V ++A+ ++M D
Sbjct: 454 NERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDAT 513
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
++ ++ +L G L + +E + + ++G I ++ V L K G+ +E +KL+
Sbjct: 514 TFNTVITSLCQKGLLLQAIETLKIMAENGCIP-NQSTYNIVVDALLKAGKTQEALKLL 570
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 133/289 (46%), Gaps = 15/289 (5%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
F +P++ + + G V D +F+++ + G V Y L+ +
Sbjct: 163 FTFNPLIRALCVRGRVPDA-----LAVFDDMLHR--GCSPSVVTYSILLDATCKASGYRQ 215
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
AM +E + + V N +++A+CN G DEAL + + + P +
Sbjct: 216 AMVLLDEMRAKGCEPDI--VTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAV----- 268
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ + CG R+K+ E+F +M +C+PD ++FN ++ LC+ G++ A ++ M
Sbjct: 269 TYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHM 328
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
S+ G PD TY ++D +V RVDD ++ G +P+ Y ++ L +
Sbjct: 329 SEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQW 388
Query: 246 DEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ A+ MV D+ ++ ++ +L G +D +++V + ++G
Sbjct: 389 EHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENG 437
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 12/212 (5%)
Query: 75 GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGY 134
G + + V N ++ LC+ G+ +A ++F + + + ++N M +GY
Sbjct: 89 GSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATLGA--------SATVVTYNTMVNGY 140
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C GR +DA + M PDT +FN LI LC G + +A ++ +M +G +P
Sbjct: 141 CRAGRIEDARRLISGMPF---PPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSV 197
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-D 253
TY +L+DA + + +M G P++ YN L+ + G +DEA + D
Sbjct: 198 VTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSD 257
Query: 254 IMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ K D +Y ++K+L + E+ E+
Sbjct: 258 LPSHGCKPDAVTYTPVLKSLCGSERWKEVEEL 289
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 137/335 (40%), Gaps = 48/335 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M D V ++ ++ + G D ++ E++ E G D V Y S++ G +
Sbjct: 398 MVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSEN--GCNPDIVTYNSIIDGLCNE 455
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++AME + ++ K V N++L LC+ ++++A +L M + PP
Sbjct: 456 RCIDDAMELLSNL--QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPP--- 510
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC------------------------- 155
+ +FN + C +G AIE + M E C
Sbjct: 511 --DATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALK 568
Query: 156 --------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+PD +++N +I + K G + EA +L M G++PD TY L
Sbjct: 569 LLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICRE 628
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM-DDASY 266
+ D ++ D GL P+ YN ++ Q D A F MV M D+++Y
Sbjct: 629 DGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTY 688
Query: 267 KFMMKALSDGGKLDEILEIVG-----GILDDGGIE 296
+++AL+ LDE +++ G+LD IE
Sbjct: 689 IILLEALAYECLLDEAKQLLVNLCSLGVLDKSLIE 723
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 11/230 (4%)
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
L +L + D+AL L D + + K L + + N++ C GR DA VF +
Sbjct: 65 LRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL 124
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
G S +++N +++ C+ G + +A L M PD +T+ L+ A RV
Sbjct: 125 GA---SATVVTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRV 178
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFM 269
D F M+ G P++ Y+ L+ + +A D M K + D +Y +
Sbjct: 179 PDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVL 238
Query: 270 MKALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVKGELSKEGRE 315
+ A+ + G +DE L I+ + G + ++ L+ E KE E
Sbjct: 239 INAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEE 288
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A KLFD M K L N
Sbjct: 195 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKENKMDDANKLFDEML-----VKALVPNG 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCK G L +A +L E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 308 MSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 368 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D +LF+E+ K +V +GV + +L+ G+
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVK--ALVPNGVTFTTLIDGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G +A L D M + P ++
Sbjct: 261 GRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKI 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 319 -----TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 374 MLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 8/251 (3%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
+F + E G SD V+ L+ GY G +A+ECY V VL
Sbjct: 57 VFAAILETKGTQRSDIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTC--RKVL 114
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ L F ++ + P +L FN++ +C G + A VF +
Sbjct: 115 EHLMKLKYFKLVWGFYEEILECGYP-----ASLYFFNILMHRFCKDGDIRVAQSVFDAIT 169
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
++ P +S+N L++ + G L E L M GV PD YTY +L++ + N++D
Sbjct: 170 KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMD 229
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
D F +M+ L PN + L+ + G +D A + M+ + L D +Y ++
Sbjct: 230 DANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLI 289
Query: 271 KALSDGGKLDE 281
L G L +
Sbjct: 290 YGLCKKGDLKQ 300
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 143/284 (50%), Gaps = 13/284 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ + + G + L E++ E G V Y +L+ G+ ++G + A+E +
Sbjct: 389 VTFNTFICILCQKGLIEQAIMLIEQMSEH--GCTVGVVTYNALVNGFCVQGHIDSALELF 446
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ K + + ++L LCN + D A +L M PP N+ +FNV+
Sbjct: 447 -----RSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPP-----NVVTFNVL 496
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+C +G ++AIE+ +M E+ C+P+ +++N L+D + K+ +A EL + KGV
Sbjct: 497 VSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGV 556
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+PD T+ ++ + +R+++ F + D G+RP VYN+++ L + +D A
Sbjct: 557 SPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAID 616
Query: 251 FFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FF MV M ++++Y +++ L+ G L E +++ + G
Sbjct: 617 FFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRG 660
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 147/321 (45%), Gaps = 14/321 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ G+ R G D RL + V D Y L++ +G
Sbjct: 106 GSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP-----VAPDAYTYTPLIRVLCDRGRVA 160
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ ++ + + + V +L+A+C N F++A+ + D M+ + P N+
Sbjct: 161 DALSLLDDML--RRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTP-----NI 213
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++NV+ +G C +GR DA E+ ++ Y PDT+S+ L+ LC + + EEL+ E
Sbjct: 214 VTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAE 273
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +K P+E T+ +L+ V+ +M + G N + N ++ + + G
Sbjct: 274 MMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGR 333
Query: 245 LDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+D+A K D+ D SY ++K L + D+ E++ ++ +
Sbjct: 334 VDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNT 393
Query: 304 FVKGELSKEGREEEVVKLMEK 324
F+ L ++G E+ + L+E+
Sbjct: 394 FI-CILCQKGLIEQAIMLIEQ 413
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 20/328 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ ++ G R+G D L L G D V Y +L+KG
Sbjct: 204 MRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSY--GFQPDTVSYTTLLKGLCAS 261
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++ E + E + +N + V + ++ C G + A+++ ++M EH
Sbjct: 262 KRWDDVEELFAEMMEKNC--MPNEVTFDMLIRFFCRGGMVERAIQVLEQM-TEHG----C 314
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A N N++ + C QGR DA ++ MG Y C+PDT+S+ ++ LC+ +A+E
Sbjct: 315 ATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKE 374
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM P+E T+ + + ++ +M + G + YN LV
Sbjct: 375 LLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFC 434
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL----DDGGIE 296
G +D A F M K + +Y ++ L + +LD E+V +L +
Sbjct: 435 VQGHIDSALELFRSM--PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVT 492
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEK 324
F+ + F ++G EE ++L+E+
Sbjct: 493 FNVLVSFF-----CQKGFLEEAIELVEQ 515
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 9/180 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ L+ F + G + L E++ E G + + Y +L+ G E+A+E
Sbjct: 491 VTFNVLVSFFCQKGFLEEAIELVEQMMEH--GCTPNLITYNTLLDGITKDCSSEDALELL 548
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ V + V + +S++ L + +EA++LF +++ PK + +N +
Sbjct: 549 HGLVSK--GVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVV-----YNKI 601
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C + +AI+ F M C P+ ++ LI+ L G+L EA++L + +GV
Sbjct: 602 LLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 147/309 (47%), Gaps = 18/309 (5%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGVVS--DGVVYGSLMKGYFM 59
G V D Y+ L+ + G +D + R+ E GG V D V Y +++ G+F
Sbjct: 179 GCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAE-----GGTVCSPDVVAYNTVIDGFFK 233
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+G +A + + E V + V +SV+ ALC D+A +M N+ P
Sbjct: 234 EGDVNKACDLFKEMV--QRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDN 291
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++N + GY G++K+A+ VF++M PD ++ N L+ LCK G + EA
Sbjct: 292 W-----TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+++ M+ KG NPD ++Y ++++ + D F M+ G+ P++ +N L+
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 406
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
GMLD+A F+ M +K +Y ++ AL GK+D+ +E ++D G +
Sbjct: 407 ANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDK 466
Query: 299 EELQEFVKG 307
++G
Sbjct: 467 YAYHCLIQG 475
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 10/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V YS ++ + D ++ K GV+ D Y +L+ GY
Sbjct: 247 MVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK--GVLPDNWTYNNLIYGYSST 304
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + E S+ VA N+++ +LC GK EA +FD M + P
Sbjct: 305 GQWKEAVRVFKEM--RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNP--- 359
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+ +M +GY +G D ++F M +PD +FN LI GML +A
Sbjct: 360 --DVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMI 417
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM D GV P TY ++ A + ++DD F +M+D G+ P+ Y+ L+
Sbjct: 418 IFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
G L +AK +IM +++D + ++ L G++
Sbjct: 478 THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 145/326 (44%), Gaps = 11/326 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y ++ R G D F ++ ++ GVV D Y L++G+ G +A E
Sbjct: 432 VTYMTVIAALCRIGKMDDAMEKFNQMIDQ--GVVPDKYAYHCLIQGFCTHGSLLKAKELI 489
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+E + N+ +++ V S+++ LC G+ +A +FD N P + +N++
Sbjct: 490 SEIM--NNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV-----YNML 542
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DGYC G+ + A+ VF M P+ + + L++ CK G + E L+ EM KG+
Sbjct: 543 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P Y +++D FE R F +M +SG+ N Y+ ++ L + DEA
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662
Query: 251 FF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
F ++ +K+D + M+ + +++E ++ I G + + + L
Sbjct: 663 LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMIT-NL 721
Query: 310 SKEGREEEVVKLMEKKEREKAEAKAR 335
KEG EE + + E +R
Sbjct: 722 LKEGLVEEAEDMFSSMQNAGCEPDSR 747
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 112/237 (47%), Gaps = 9/237 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D VVY+ LM G+ G + R+F+ + G+ + V YG+L+ GY G +
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS--AGIEPNVVGYGTLVNGYCKIGRID 588
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + E + +K S + N ++D L G+ A F M +A+N
Sbjct: 589 EGLSLFREML--QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG-----IAMNK 641
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++++ G F +AI +F+++ D ++ N +I + + + EA++L+
Sbjct: 642 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 701
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+S G+ P TY +++ + V++ F M ++G P+ + N +V +L++
Sbjct: 702 ISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 758
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Query: 133 GYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV- 190
G+C R +A+++ + E C PD S+N L+ LC G +A++L M++ G
Sbjct: 157 GFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTV 216
Query: 191 -NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+PD Y ++D F+ V+ F++MV G+ P+L Y+ +V L + +D+A+
Sbjct: 217 CSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAE 276
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+F MV K + D+ +Y ++ S G+ E + +
Sbjct: 277 AFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV 313
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y L+ G+ + G D LF E+ +K G+ ++Y ++ G F
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK--GIKPSTILYNIIIDGLFEA 619
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A ++E S + M+ + VL L N FDEA+ LF ++ + +
Sbjct: 620 GRTVPAKVKFHEMT--ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMN-----V 672
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ + N M G R ++A ++F + P ++++ +I L K G++ EAE+
Sbjct: 673 KIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAED 732
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++ M + G PD ++ + N + Y K+
Sbjct: 733 MFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 772
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
++P YTY +LMD C +R + +F +++ +GLR + + + L+ + DEA
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA- 167
Query: 250 SFFDIMVKKLK-----MDDASYKFMMKALSDGGK---LDEILEIV---GGILDDGGIEFS 298
DI++ + D SY ++K+L + GK D++L ++ G + + ++
Sbjct: 168 --LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225
Query: 299 EELQEFVK-------GELSKEGREEEVVK-LMEKKEREKAEAKAREAEAAEAAKR 345
+ F K +L KE + + L+ A KAR + AEA R
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLR 280
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 156/327 (47%), Gaps = 16/327 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF + + ++ GF R G D LF ++K VV D V Y +L+ G+
Sbjct: 103 MTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKA 162
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA + EA+ + + + V + ++D C +G+ E L L + M+ E L
Sbjct: 163 KRLAEARVLF-EAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREG-----L 216
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + +CG+G + E+F +M + SP+ ++++ L+ L + G EA E
Sbjct: 217 KADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASE 276
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +M+ +GV PD Y +L D + R D MV G P YN +V L
Sbjct: 277 MLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLC 336
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ +D+A ++MVKK K DA +Y ++K L GK+ E +++ +L + +F
Sbjct: 337 KEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSE---KFHV 393
Query: 300 ELQEF-----VKGELSKEGREEEVVKL 321
+ F ++G L KEGR + ++
Sbjct: 394 KPDVFTCNNLIQG-LCKEGRVHDAARI 419
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 157/392 (40%), Gaps = 81/392 (20%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G AD VYS L+ F +GD + LF+E+ + V + V Y LM+G G
Sbjct: 215 GLKADVFVYSSLISAFCGEGDIETGRELFDEMLRR--KVSPNVVTYSCLMQGLGRTGRWR 272
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA E + V+ VA + D LC NG+ +A+K+ D M + P L N+
Sbjct: 273 EASEMLKDMTARG--VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNV 330
Query: 125 G------------------------------SFNVMADGYCGQGRFKDAIEVFRKM--GE 152
++N + G CG G+ +A+++++ + +
Sbjct: 331 VVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEK 390
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV---------------------- 190
+ PD + NNLI LCK G + +A ++ M + G+
Sbjct: 391 FHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIE 450
Query: 191 -------------NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
+P+ TY ++++ ++ + F KM DSG+RP + YN L+
Sbjct: 451 ALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMT 510
Query: 238 KLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGI----LDD 292
L + L++A+S F M +D S+ ++ G + E++ + L
Sbjct: 511 SLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVP 570
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ FS + F SK G +E + L EK
Sbjct: 571 DAVTFSILINRF-----SKLGMLDEAMGLYEK 597
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 165/382 (43%), Gaps = 45/382 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + Y+ ++ G ++ D F + E + +K G D V Y +L+KG
Sbjct: 316 MVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKK--GKKPDAVTYNTLLKGLCGA 373
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EAM+ + + E VK N+++ LC G+ +A ++ M L
Sbjct: 374 GKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVE-----MGL 428
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N + +GY + +A+++++ E SP++++++ +I+ LCK ML+ A
Sbjct: 429 QGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARG 488
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM---------------VDSGL 225
L+ +M D G+ P Y LM + + ++ + F++M +D L
Sbjct: 489 LFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTL 548
Query: 226 R--------------------PNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-A 264
+ P+ ++ L+ + ++GMLDEA ++ MV +
Sbjct: 549 KAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVV 608
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ ++K G+ ++I+ ++ + D + +L + L R +V K++ K
Sbjct: 609 VFDSLLKGYGLKGETEKIISLLHQ-MADKDVVLDSKLTSTILACLCHMSRNLDVEKILPK 667
Query: 325 -KEREKAEAKAREAEAAEAAKR 345
++ + +K + E R
Sbjct: 668 FSQQSEHTSKGTTIKCHELLMR 689
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 134 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGHLD 191
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V + +++ LC K D+A +LFD M K L N
Sbjct: 192 EGFRLKSAMLA--SGVLPDVYTYSVLINGLCKESKMDDANELFDEML-----VKGLIPNG 244
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCK G L +A +L E
Sbjct: 245 VTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 304
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD++TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 305 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGR 364
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 365 SVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 398
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + D YS L+ G ++ D LF+E+ K G++ +GV + +L+ G+
Sbjct: 200 MLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLIPNGVTFTTLIDGHCKN 257
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + S+ + N+++ LC G +A L D M + P +
Sbjct: 258 GRVDFAMEIYKRMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKF 315
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 316 -----TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEK 370
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M +G P++ YN L+
Sbjct: 371 MLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLM 426
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 98/252 (38%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 9 NSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSD 68
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 69 IYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYE 128
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP++ YN L+ +++G
Sbjct: 129 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 188
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M+ + D +Y ++ L K+D+ E+ +L G I
Sbjct: 189 HLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFT 248
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 249 TLIDGH-CKNGR 259
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 140/295 (47%), Gaps = 17/295 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VAD Y+ ++ F + G + + F E++E G + V Y +L+ Y
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV--GCTPNVVTYTALIHAYLKAKKVS 570
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------- 117
A E + + E + V ++++D C G+ ++A ++F+RM + P
Sbjct: 571 YANELFETMLSEGCLPNI--VTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFK 628
Query: 118 -----KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
N+ + + DG+C R ++A ++ M C P+ + ++ LID LCK
Sbjct: 629 QYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 688
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
G L EA+E+ EMS+ G YTY L+D F+V R D + KM+++ PN+ +Y
Sbjct: 689 GKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 748
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
++ L +VG DEA +M +K + + +Y M+ GK++ LE++
Sbjct: 749 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELL 803
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 151/345 (43%), Gaps = 36/345 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEEL--KEKLGGV-------------VS 45
M +G + + V YS L+ G + G + ++FE + + + V
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERP 638
Query: 46 DGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK 105
+ V+YG+L+ G+ EEA + + E + + + ++++D LC GK DEA +
Sbjct: 639 NVVIYGALLDGFCKLHRVEEARKLLDAMSMEGC--EPNQIVYDALIDGLCKVGKLDEAQE 696
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
+ M +EH P L +++ + D Y R A +V KM E C+P+ + + +
Sbjct: 697 VKAEM-SEHGFP----ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 751
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
ID LCK G EA +L M +KG P+ TY ++D + +++ +M G+
Sbjct: 752 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGV 811
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYK-----FMMKALSDGGKL 279
PN Y L+ + G LD A + + M + A Y+ F + + G L
Sbjct: 812 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLL 871
Query: 280 DEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
DEI + DD S L + L K R E ++L+E+
Sbjct: 872 DEIGQ------DDTAPFLS--LYRLLVDNLIKAQRLEMALRLLEE 908
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 129/295 (43%), Gaps = 13/295 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE--KLGGVVSDGVVYGSLM--KG 56
M ++G P +++ L+ + GD ++L +++ + G V ++ GS+ K
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKD 422
Query: 57 YFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+ E A + Y+E + + V ++ + +S LC+ GK+++A + M +
Sbjct: 423 SLSCHLLELAEKAYSEMLA--TGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P + +++ + C + + A +F +M D ++ ++D CK G++
Sbjct: 481 P-----DTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A + + EM + G P+ TY L+ A + +V F M+ G PN+ Y+ L+
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
+ G +++A F+ M + D F K D + I G +LD
Sbjct: 596 DGHCKAGQMEKACQIFERMCGSKDVPDVDMYF--KQYDDDNSERPNVVIYGALLD 648
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 138/330 (41%), Gaps = 55/330 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G + +VY L+ G + G D + E+ E G + Y SL+ YF
Sbjct: 666 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEH--GFPATLYTYSSLIDRYFKV 723
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++ A + ++ + ENS + V ++D LC GK DEA KL M+ + P
Sbjct: 724 KRQDLASKVLSKML-ENSCAP-NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP--- 778
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ M DG+ G+ + +E+ +MG +P+ +++ LID CKNG L A
Sbjct: 779 --NVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHN 836
Query: 181 LYGEMSD--------------KGVN-------------------PDEYTYGLLMDACFEV 207
L EM +G N P Y LL+D +
Sbjct: 837 LLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKA 896
Query: 208 NRVD-------DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK 260
R++ + AT+ +VD + YN L+ L +D+A F M KK
Sbjct: 897 QRLEMALRLLEEVATFSATLVDYS-----STYNSLIESLCLANKVDKAFRLFSEMSKKGV 951
Query: 261 MDD-ASYKFMMKALSDGGKLDEILEIVGGI 289
+ + ++ ++K L K+ E L ++ I
Sbjct: 952 IPEMQTFCSLIKGLFRNSKISEALLLLDFI 981
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 127/327 (38%), Gaps = 51/327 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-----GVVSDGVVYGSLMK 55
M + FV D V Y+ L+ G LFEE + L + + V Y +L+
Sbjct: 293 METENFVPDTVFYTKLISGLCEAS-------LFEEAMDFLNRMRATSCLPNVVTYSTLLC 345
Query: 56 GYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEH 114
G K N + E S NS++ A C +G A KL +M K H
Sbjct: 346 GCLNKKQLGRCKRVLNMMMMEGCYP--SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403
Query: 115 NP-------------------------------PKRLA--VNLGSFNV--MADGYCGQGR 139
P + LA V L NV C G+
Sbjct: 404 TPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGK 463
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
++ A V R+M PDT +++ ++ LC + A L+ EM G+ D YTY +
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKL 259
++D+ + ++ +F +M + G PN+ Y L+ ++ + A F+ M+ +
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 260 KMDD-ASYKFMMKALSDGGKLDEILEI 285
+ + +Y ++ G++++ +I
Sbjct: 584 CLPNIVTYSALIDGHCKAGQMEKACQI 610
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 74/200 (37%), Gaps = 33/200 (16%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN--LGSF------------------ 127
N ++ C +G F AL+ R+K+ P R N + +F
Sbjct: 204 NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263
Query: 128 -NVMADGY---------CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
N+ DG+ C G++++A+ + M PDT+ + LI LC+ + E
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLCEASLFEE 320
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A + M P+ TY L+ C ++ M+ G P+ ++N LV
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 238 KLVQVGMLDEAKSFFDIMVK 257
G A MVK
Sbjct: 381 AYCTSGDHSYAYKLLKKMVK 400
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 150/320 (46%), Gaps = 10/320 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
AD V+++ ++ + D LF+E++ K G+ + V Y SL+ G +A
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETK--GIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ ++ + + + V N+++DA GKF EA KL D M P ++ ++
Sbjct: 241 QLLSDMI--EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP-----DIFTY 293
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + +G+C R A ++F M C PD ++N LI CK+ + + EL+ EMS
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G+ D TY L+ F D+ F++MV G+ P++ Y+ L+ L G L++
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 248 AKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A FD M K ++K+D Y M++ + GK+D+ ++ + G +
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 307 GELSKEGREEEVVKLMEKKE 326
G SK +E L + KE
Sbjct: 474 GLCSKRLLQEAYALLKKMKE 493
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 8/235 (3%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
V SL+ GY +A+ ++ V + + +++ L + K EA+ L
Sbjct: 81 VTLSSLLNGYCHGKRISDAVALVDQMV--EMGYRPDTITFTTLIHGLFLHNKASEAVALV 138
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
DRM P NL ++ V+ +G C +G A + KM + D + FN +ID
Sbjct: 139 DRMVQRGCQP-----NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
LCK + +A L+ EM KG+ P+ TY L+ R D + M++ + P
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 253
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
NL +N L+ V+ G EA+ D M+K+ + D +Y ++ +LD+
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 141/319 (44%), Gaps = 54/319 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V YS L+ G +L ++ EK + + V + +L+ + +
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK--KINPNLVTFNALIDAFVKE 268
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + +++ + S+ NS+++ C + + D+A ++F+ M ++ P
Sbjct: 269 GKFVEAEKLHDDMIKR--SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP--- 323
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY--------------------RC----- 155
+L ++N + G+C R +D E+FR+M C
Sbjct: 324 --DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 156 ----------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
PD ++++ L+D LC NG L +A E++ M + D Y Y +++
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK----- 260
+ +VDDG F + G++PN+ YN ++ L +L EA + ++KK+K
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA----LLKKMKEDGPL 497
Query: 261 MDDASYKFMMKA-LSDGGK 278
D +Y +++A L DG K
Sbjct: 498 PDSGTYNTLIRAHLRDGDK 516
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D V Y+ L+ G DGD D ++F+++ GV D + Y L+ G G
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD--GVPPDIMTYSILLDGLCNNGKL 411
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A+E ++ + S +K+ ++++ +C GK D+ LF + + P N
Sbjct: 412 EKALEVFDYM--QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP-----N 464
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N M G C + ++A + +KM E PD+ ++N LI ++G A + EL
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 524
Query: 184 EMSDKGVNPDEYTYGLL 200
EM D T GL+
Sbjct: 525 EMRSCRFVGDASTIGLV 541
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV--NLGSFNVMADGYCGQGRFKDAIE 145
N +L A+ KFD + L ++M+ RL + NL ++N++ + +C + + A+
Sbjct: 14 NKLLSAIAKMKKFDLVISLGEKMQ-------RLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+ KM + P ++ ++L++ C +++A L +M + G PD T+ L+ F
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDA 264
N+ + +MV G +PNL Y +V L + G +D A + + M K++ D
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 265 SYKFMMKALSDGGKLDEILEI 285
+ ++ +L +D+ L +
Sbjct: 187 IFNTIIDSLCKYRHVDDALNL 207
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 1/155 (0%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
FN + +F I + KM S + ++N LI+ C+ ++ A L G+M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G P T L++ R+ D +MV+ G RP+ + L+ L
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
EA + D MV++ + + +Y ++ L G +D
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 150/320 (46%), Gaps = 10/320 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
AD V+++ ++ + D LF+E++ K G+ + V Y SL+ G +A
Sbjct: 182 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETK--GIRPNVVTYSSLISCLCSYGRWSDAS 239
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ ++ + + + V N+++DA GKF EA KL D M P ++ ++
Sbjct: 240 QLLSDMI--EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP-----DIFTY 292
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + +G+C R A ++F M C PD ++N LI CK+ + + EL+ EMS
Sbjct: 293 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 352
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G+ D TY L+ F D+ F++MV G+ P++ Y+ L+ L G L++
Sbjct: 353 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 412
Query: 248 AKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A FD M K ++K+D Y M++ + GK+D+ ++ + G +
Sbjct: 413 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 472
Query: 307 GELSKEGREEEVVKLMEKKE 326
G SK +E L + KE
Sbjct: 473 GLCSKRLLQEAYALLKKMKE 492
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 8/235 (3%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
V SL+ GY +A+ ++ V + + +++ L + K EA+ L
Sbjct: 80 VTLSSLLNGYCHGKRISDAVALVDQMV--EMGYRPDTITFTTLIHGLFLHNKASEAVALV 137
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
DRM P NL ++ V+ +G C +G A + KM + D + FN +ID
Sbjct: 138 DRMVQRGCQP-----NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 192
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
LCK + +A L+ EM KG+ P+ TY L+ R D + M++ + P
Sbjct: 193 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 252
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
NL +N L+ V+ G EA+ D M+K+ + D +Y ++ +LD+
Sbjct: 253 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 307
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 141/319 (44%), Gaps = 54/319 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V YS L+ G +L ++ EK + + V + +L+ + +
Sbjct: 210 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK--KINPNLVTFNALIDAFVKE 267
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + +++ + S+ NS+++ C + + D+A ++F+ M ++ P
Sbjct: 268 GKFVEAEKLHDDMI--KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP--- 322
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY--------------------RC----- 155
+L ++N + G+C R +D E+FR+M C
Sbjct: 323 --DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 380
Query: 156 ----------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
PD ++++ L+D LC NG L +A E++ M + D Y Y +++
Sbjct: 381 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 440
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK----- 260
+ +VDDG F + G++PN+ YN ++ L +L EA + ++KK+K
Sbjct: 441 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA----LLKKMKEDGPL 496
Query: 261 MDDASYKFMMKA-LSDGGK 278
D +Y +++A L DG K
Sbjct: 497 PDSGTYNTLIRAHLRDGDK 515
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D V Y+ L+ G DGD D ++F+++ GV D + Y L+ G G
Sbjct: 353 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD--GVPPDIMTYSILLDGLCNNGKL 410
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A+E ++ + S +K+ ++++ +C GK D+ LF + + P N
Sbjct: 411 EKALEVFDYM--QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP-----N 463
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N M G C + ++A + +KM E PD+ ++N LI ++G A + EL
Sbjct: 464 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 523
Query: 184 EMSDKGVNPDEYTYGLL 200
EM D T GL+
Sbjct: 524 EMRSCRFVGDASTIGLV 540
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 8/190 (4%)
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV--FRKMGEYRCS 156
K D+A+ LF M P ++ FN + +F I + KM +
Sbjct: 22 KLDDAIGLFGGMVKSRPLP-----SIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYE 76
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P ++ ++L++ C +++A L +M + G PD T+ L+ F N+ +
Sbjct: 77 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 136
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSD 275
+MV G +PNL Y +V L + G +D A + + M K++ D + ++ +L
Sbjct: 137 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 196
Query: 276 GGKLDEILEI 285
+D+ L +
Sbjct: 197 YRHVDDALNL 206
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 133/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++GD +F + + G+ V + +LM GY G +
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIRVAQSVFNAITK--WGLRPSVVSFNTLMNGYIRLGDLD 177
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++ S V+ + +++ LC K D+A +LFD M + K L N
Sbjct: 178 EGFRL--KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD-----KGLVPNG 230
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A +L E
Sbjct: 231 VTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDE 290
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG- 243
MS KG+ PD+ TY L+D C + ++ + ++M+ +R + Y L+ L Q G
Sbjct: 291 MSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 350
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
LD K +++ LK D +Y ++ G
Sbjct: 351 YLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKG 384
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ +K G+V +GV + +L+ G+
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDK--GLVPNGVTFTTLIDGHCKS 243
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 244 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 301
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 302 -----TYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEK 356
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 357 VLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ + K Y E+
Sbjct: 58 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEIL 117
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP++ +N L+ +++G LD
Sbjct: 118 ECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLD 177
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E M ++ D +Y ++ L K+D+ E+ +LD G + +
Sbjct: 178 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLI 237
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 238 DGH-CKSGR 245
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 139/280 (49%), Gaps = 20/280 (7%)
Query: 9 DPVVYSYLML--GFVRDGDSDGVFRLFEELKEK--LGGVVSDGVVYGSLMKGYFMKGMEE 64
P VY++ M+ G + G + +++ E VVS ++ SL K +
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLV----N 261
Query: 65 EAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA++ + ++G + +V V NS++ +CN+G++ +A LF M + P
Sbjct: 262 EAVDLFYHMRSIGISPTV----VTYNSLIYGMCNSGQWKQASILFKEMLEWNMKP----- 312
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ +F+++ D C +G +A+ VF KM + PD +++++LI +CK+ + E+ L
Sbjct: 313 DVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLL 372
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM + + PD T+ + +D + V + + M++ GLRPN+ YN L+
Sbjct: 373 NEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLH 432
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+DEA+ FDIMV K D SY ++K ++DE
Sbjct: 433 SQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDE 472
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 119/245 (48%), Gaps = 8/245 (3%)
Query: 46 DGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK 105
D V Y SL+ G + +E+ NE + N ++ V + +D C G EA
Sbjct: 348 DIVTYSSLIHGVCKSSLWKESSTLLNEMLSRN--IRPDVVTFSIWVDVFCKKGMVSEAQS 405
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
+ + M P N+ ++N + DGYC + +A +VF M C+PD LS+N L
Sbjct: 406 IINLMIERGLRP-----NVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNIL 460
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
I CK+ + EA++L+ EMS KG+ P+ T+ L+ + R F+KM G
Sbjct: 461 IKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGC 520
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILE 284
P+L Y+ L+ + G LDEA + F+ + K +LK + K ++ + GKL++ E
Sbjct: 521 PPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKE 580
Query: 285 IVGGI 289
+ +
Sbjct: 581 LFSSL 585
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 9/229 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D V +S + F + G + + E+ G+ + V Y SLM GY +
Sbjct: 375 MLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIER--GLRPNVVTYNSLMDGYCLH 432
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA + ++ V N ++ N ++ C + + DEA +LFD M + K L
Sbjct: 433 SQMDEARKVFDIMV--NKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSH-----KGL 485
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N + + G C GR A E+F+KMG + C PD ++++ L+ CK+G L EA
Sbjct: 486 TPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALA 545
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
L+ + + P+ +L+ + +++D F + L+P++
Sbjct: 546 LFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 126 SFNVMADGYCGQGRFKDAIE-----------------------------------VFRKM 150
+FN + +G C +GR +A+E +KM
Sbjct: 176 TFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKM 235
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E C P+ +S++ +ID LCKN ++ EA +L+ M G++P TY L+ +
Sbjct: 236 VELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQW 295
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFM 269
+ F++M++ ++P++ ++ LV L + G++ EA S F M++ ++ D +Y +
Sbjct: 296 KQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSL 355
Query: 270 MKALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVKGELSKEGREEEVVKLM 322
+ + E ++ +L + FS + F K + E + ++ LM
Sbjct: 356 IHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEA--QSIINLM 410
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/290 (18%), Positives = 114/290 (39%), Gaps = 47/290 (16%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+ +N+ V N ++ N +L AL +D + ++ +M+ ++ +
Sbjct: 86 DDALAYFNQMVHMNPFPCITQF--NQLLAALVRMKHYDSVVSIYRKMEFF-----GVSCS 138
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + ++ + C V K+ + P ++FN LI+ LC G + EA E
Sbjct: 139 VYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLD 198
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD--------------------- 222
+ +G P YT+ ++++ ++ + + +KMV+
Sbjct: 199 YIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNR 258
Query: 223 --------------SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYK 267
G+ P + YN L+ + G +A F M++ +K D ++
Sbjct: 259 LVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFS 318
Query: 268 FMMKALSDGGKLDEILEIVGGIL----DDGGIEFSEELQEFVKGELSKEG 313
++ AL G + E L + G ++ + + +S + K L KE
Sbjct: 319 ILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKES 368
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
F DA+ F +M P FN L+ L + +Y +M GV+ YT +
Sbjct: 85 FDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTI 144
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKK 258
L++ ++ V G + K+ G +P++ +N L+ L G + EA D IM +
Sbjct: 145 LINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRG 204
Query: 259 LKMDDASYKFMMKALSDGGK 278
+ ++ ++ L GK
Sbjct: 205 YQPTVYTHTMIVNGLCKIGK 224
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 123 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 180
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 181 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDDANELFDEM-----LVKGLIPNG 233
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG C GR A+E++++M PD +++N LI LCK G L +A +L E
Sbjct: 234 VTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 293
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD++TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 294 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 353
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 354 SVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKG 387
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G++ +GV + +L+ G
Sbjct: 189 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLIPNGVTFTTLIDGRCKN 246
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + S+ + N+++ LC G +A L D M + P +
Sbjct: 247 GRVDLAMEIYKRMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKF 304
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 305 -----TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 359
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM + PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 360 MLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 415
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG + + V ++ L+ G ++G D +++ + + ++ D + Y +L+ G K
Sbjct: 224 MLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQ--SLLPDLITYNTLIYGLCKK 281
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A + +E +K +++D C G D A + RM E+ +
Sbjct: 282 GDLKQAHDLIDEM--SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQEN-----I 334
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + G C +GR DA ++ R+M PDT ++ +I++ CK G + + +
Sbjct: 335 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSK 394
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L EM G P TY +LM+
Sbjct: 395 LLKEMQRDGHAPSVVTYNVLMN 416
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E+
Sbjct: 61 FSGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 120
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP++ YN L+ +++G LD
Sbjct: 121 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 180
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E M+ ++ D +Y ++ L K+D+ E+ +L G I +
Sbjct: 181 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLI 240
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 241 DGR-CKNGR 248
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 160/348 (45%), Gaps = 33/348 (9%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V+YS ++ G +D + + L+ E+ K + V SL+ GY + G +EA
Sbjct: 209 TDVVMYSTIIDGLCKDKLVNDAYELYSEMITK--RISPTVVTLNSLIYGYCIVGQFKEAF 266
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA------ 121
E V +N + N ++DALC GK EA M E P +
Sbjct: 267 GLLREMVLKN--INPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMD 324
Query: 122 -------VNLGS--FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
VN ++++ +G+C A+ +F +M R +PDT+++N+LID LCK+
Sbjct: 325 GYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKS 384
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
G ++ A EL EM D G D TY L+DA + + VD +K+ D G++ ++ Y
Sbjct: 385 GRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTY 444
Query: 233 NRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
N L+ L + G L +A+ F D+++K + +Y M+ L G L+E ++ + D
Sbjct: 445 NILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMED 504
Query: 292 DGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+G + + + ++ L E + E+AE RE A
Sbjct: 505 NGCVPDAVTCETIIRA-------------LFENDKNERAEKLLREMIA 539
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 9/214 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VYS ++ GF + D LF E++ + + D V Y SL+ G G A E +
Sbjct: 338 VYSIVINGFCKIKMVDKALSLFYEMRCR--RIAPDTVTYNSLIDGLCKSGRISYAWELVD 395
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E +S + NS++DALC N D+A+ L ++K++ + +++ ++N++
Sbjct: 396 EM--RDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQ-----GIQLDMYTYNILI 448
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
DG C QGR KDA +F+ + + ++ +I+ LC G+L EAE L +M D G
Sbjct: 449 DGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCV 508
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
PD T ++ A FE ++ + R+M+ GL
Sbjct: 509 PDAVTCETIIRALFENDKNERAEKLLREMIARGL 542
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 149/320 (46%), Gaps = 18/320 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V S L+ + G F +F ++ + G + + +L+KG+ + +
Sbjct: 101 GIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKM--GYHPNTITLTTLVKGFCLNHKVK 158
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ ++ + + V+ ++++ LC G+ AL++ +++ K ++ ++
Sbjct: 159 EALHFHDHVLA--LGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEG-----KLVSTDV 211
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG C DA E++ +M R SP ++ N+LI C G EA L E
Sbjct: 212 VMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLRE 271
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M K +NPD YT+ +L+DA + ++ + + M+ G+ P++ Y+ L+ V
Sbjct: 272 MVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNE 331
Query: 245 LDEAKSFFDIMVK---KLKMDDASYKFMMKALSDGGKLDEIL--EIVGGILDDGGIEFSE 299
+++AK + I++ K+KM D + + D + ++ G+ G I ++
Sbjct: 332 VNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAW 391
Query: 300 ELQEFVKGELSKEGREEEVV 319
EL + E+ G+ +++
Sbjct: 392 ELVD----EMRDSGQPADII 407
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/179 (18%), Positives = 70/179 (39%), Gaps = 5/179 (2%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
D + F +M +P + F ++ L K L+ ++ G+ P+ + +L+
Sbjct: 54 DLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILI 113
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLK 260
+ + ++ + F K++ G PN LV + EA F D ++
Sbjct: 114 NCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFH 173
Query: 261 MDDASYKFMMKALSDGGK----LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
+ SY ++ L G+ L + +I G ++ + +S + K +L + E
Sbjct: 174 FNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYE 232
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 130/252 (51%), Gaps = 9/252 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G + Y+ ++ + G ++ +++ EK+G V + V Y +L+ GY ++
Sbjct: 158 MLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQM-EKVG-CVPNVVNYSTLIDGYCLR 215
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA ++ V + + + S+++ C + +EA++L D K L
Sbjct: 216 GQMDEARSVFDLMVSKGCTP--NVYTYTSLMNGYCKIERIEEAVQLLDETLR-----KGL 268
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +F + G C GR A ++FR + + +P+ +++ L+D LCK+G L EA
Sbjct: 269 VPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFA 328
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM V P+ Y +L+D+ + ++ DG F +++D GL+PN+ Y LVG L
Sbjct: 329 LFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALC 388
Query: 241 QVGMLDEAKSFF 252
+ G++ EA F
Sbjct: 389 KEGLIIEAHKLF 400
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 9/237 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V + V YS L+ G+ G D +F+ + K G + Y SLM GY E
Sbjct: 197 GCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSK--GCTPNVYTYTSLMNGYCKIERIE 254
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA++ +E + + V +++ LC G+ A +LF + + P N+
Sbjct: 255 EAVQLLDETL--RKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTP-----NI 307
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ V+ DG C G ++A +F++M P+ + + LID LCK G + + +EL+
Sbjct: 308 MTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSR 367
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ D+G+ P+ YTY L+ A + + + FRKM + G P+ YN ++ +Q
Sbjct: 368 LIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQ 424
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 126/282 (44%), Gaps = 42/282 (14%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S V ++L+ LC GK D+ + L+D M P N+ ++NV+ + G+ +
Sbjct: 131 SIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQP-----NVYTYNVIINSLSKSGKANE 185
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ ++M + C P+ ++++ LID C G + EA ++ M KG P+ YTY LM+
Sbjct: 186 ALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMN 245
Query: 203 ACFEVNRVD----------------DGATY-------------------FRKMVDSGLRP 227
++ R++ D T+ FR + G P
Sbjct: 246 GYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTP 305
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIV 286
N+ Y L+ L + G L+EA + F M + +K + Y ++ +L GK+ + E+
Sbjct: 306 NIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELF 365
Query: 287 GGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
++D+ G++ + + G L KEG E KL K E +
Sbjct: 366 SRLIDE-GLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEED 406
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V D V ++ ++ G R G +LF + G + + YG L+ G G
Sbjct: 266 KGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAH--GHTPNIMTYGVLLDGLCKHGNL 323
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EEA + E + S+VK + V ++D+LC GK + +LF R+ +E P N
Sbjct: 324 EEAFALFQEM--QRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKP-----N 376
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + C +G +A ++FRKM E C+PD ++N +I ++ + A +L
Sbjct: 377 VYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVE 436
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRV 210
EM ++G + D T LL D F N +
Sbjct: 437 EMVNRGFSADAATRALLND--FPTNDI 461
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 95/193 (49%), Gaps = 2/193 (1%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ S +++ + +C R + V K+ + P ++F L++ LC G + + LY
Sbjct: 96 DIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLY 155
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M +G+ P+ YTY +++++ + + ++ + ++M G PN+ Y+ L+
Sbjct: 156 DDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLR 215
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G +DEA+S FD+MV K + +Y +M +++E ++++ L G +
Sbjct: 216 GQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTF 275
Query: 302 QEFVKGELSKEGR 314
+ G L + GR
Sbjct: 276 TTIISG-LCRAGR 287
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 101/244 (41%), Gaps = 7/244 (2%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+++ C+ + D L + ++ P ++ +F + +G C +G+ + ++
Sbjct: 103 LINCFCHLHRVDFGLSVLSKILKLGLEP-----SIVTFTTLLNGLCMEGKMDQVMMLYDD 157
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M P+ ++N +I+ L K+G EA +M G P+ Y L+D +
Sbjct: 158 MLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQ 217
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+D+ + F MV G PN+ Y L+ ++ ++EA D ++K L D ++
Sbjct: 218 MDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTT 277
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
++ L G+ ++ I G + G L K G EE L ++ +R
Sbjct: 278 IISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDG-LCKHGNLEEAFALFQEMQRS 336
Query: 329 KAEA 332
+
Sbjct: 337 TVKP 340
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA+ FR M + P + F+ L + + G L E+ G+ D ++ +L+
Sbjct: 45 DALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILI 104
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLK 260
+ ++RVD G + K++ GL P++ + L+ L G +D+ + D++V+ L+
Sbjct: 105 NCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQ 164
Query: 261 MDDASYKFMMKALSDGGKLDEIL 283
+ +Y ++ +LS GK +E L
Sbjct: 165 PNVYTYNVIINSLSKSGKANEAL 187
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 146/309 (47%), Gaps = 18/309 (5%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGVVS--DGVVYGSLMKGYFM 59
G V D Y+ L+ + G +D + R+ E GG V D V Y +++ G+F
Sbjct: 179 GCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAE-----GGTVCSPDVVAYNTVIDGFFK 233
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+G +A + + E V + V +SV+ ALC D+A +M N+ P
Sbjct: 234 EGDVNKACDLFKEMV--QRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDN 291
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++N + GY G++K+A+ VF++M PD ++ N L+ LCK G + EA
Sbjct: 292 W-----TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+++ M+ KG NPD ++Y ++++ + D F M+ G+ P + +N L+
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 406
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
GMLD+A F+ M +K +Y ++ AL GK+D+ +E ++D G +
Sbjct: 407 ANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDK 466
Query: 299 EELQEFVKG 307
++G
Sbjct: 467 YAYHCLIQG 475
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 10/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V YS ++ + D ++ K GV+ D Y +L+ GY
Sbjct: 247 MVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK--GVLPDNWTYNNLIYGYSST 304
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + E S+ VA N+++ +LC GK EA +FD M + P
Sbjct: 305 GQWKEAVRVFKEM--RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNP--- 359
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+ +M +GY +G D ++F M +P +FN LI GML +A
Sbjct: 360 --DVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMI 417
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM D GV P TY ++ A + ++DD F +M+D G+ P+ Y+ L+
Sbjct: 418 IFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
G L +AK +IM +++D + ++ L G++
Sbjct: 478 THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 145/326 (44%), Gaps = 11/326 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y ++ R G D F ++ ++ GVV D Y L++G+ G +A E
Sbjct: 432 VTYMTVIAALCRIGKMDDAMEKFNQMIDQ--GVVPDKYAYHCLIQGFCTHGSLLKAKELI 489
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+E + N+ +++ V S+++ LC G+ +A +FD N P + +N++
Sbjct: 490 SEIM--NNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV-----YNML 542
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DGYC G+ + A+ VF M P+ + + L++ CK G + E L+ EM KG+
Sbjct: 543 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P Y +++D FE R F +M +SG+ N Y+ ++ L + DEA
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662
Query: 251 FF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
F ++ +K+D + M+ + +++E ++ I G + + + L
Sbjct: 663 LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMIT-NL 721
Query: 310 SKEGREEEVVKLMEKKEREKAEAKAR 335
KEG EE + + E +R
Sbjct: 722 IKEGLVEEAEDMFSSMQNAGCEPDSR 747
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Query: 133 GYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV- 190
G+C R +A+++ + E C PD S+N L+ LC G +A++L M++ G
Sbjct: 157 GFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTV 216
Query: 191 -NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+PD Y ++D F+ V+ F++MV G+ P+L Y+ +V L + +D+A+
Sbjct: 217 CSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAE 276
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+F MV K + D+ +Y ++ S G+ E + +
Sbjct: 277 AFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV 313
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 112/237 (47%), Gaps = 9/237 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D VVY+ LM G+ G + R+F+ + G+ + V YG+L+ GY G +
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS--AGIEPNVVGYGTLVNGYCKIGRID 588
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + E + +K S + N ++D L G+ A F M +A+N
Sbjct: 589 EGLSLFREML--QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG-----IAMNK 641
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++++ G F +AI +F+++ D ++ N +I + + + EA++L+
Sbjct: 642 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 701
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+S G+ P TY +++ + V++ F M ++G P+ + N +V +L++
Sbjct: 702 ISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 758
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y L+ G+ + G D LF E+ +K G+ ++Y ++ G F
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK--GIKPSTILYNIIIDGLFEA 619
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A ++E S + M+ + VL L N FDEA+ LF ++ + +
Sbjct: 620 GRTVPAKVKFHEMT--ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMN-----V 672
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ + N M G R ++A ++F + P ++++ +I L K G++ EAE+
Sbjct: 673 KIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAED 732
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++ M + G PD ++ + N + Y K+
Sbjct: 733 MFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 772
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
++P YTY +LMD C +R + +F +++ +GLR + + + L+ + DEA
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA- 167
Query: 250 SFFDIMVKKLK-----MDDASYKFMMKALSDGGK---LDEILEIV---GGILDDGGIEFS 298
DI++ + D SY ++K+L + GK D++L ++ G + + ++
Sbjct: 168 --LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225
Query: 299 EELQEFVK-------GELSKEGREEEVVK-LMEKKEREKAEAKAREAEAAEAAKR 345
+ F K +L KE + + L+ A KAR + AEA R
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLR 280
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 136/267 (50%), Gaps = 10/267 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VA+ Y+ L+ G ++G F ++E+++E GV + Y +M + G +
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQED--GVFPNLYTYNCVMNQHCKDGRTK 285
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + ++E V + V N+++ LC K +EA K+ D+MK++ P NL
Sbjct: 286 DAFKLFDEM--RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINP-----NL 338
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG+CG G+ A+ + R + SP +++N L+ CK G + A ++ E
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKE 398
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++G+ P + TY +L+D ++ ++ M + GL P++ Y+ L+ G
Sbjct: 399 MEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQ 458
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMM 270
++EA F +MV KKL+ + Y M+
Sbjct: 459 MNEASRLFKLMVAKKLEPNKVIYNTMV 485
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V Y+ L+ GF + GD+ G ++ +E++E+ G+ + Y L+ +
Sbjct: 367 RGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEER--GIKPSKITYTILIDTFARMDNM 424
Query: 64 EEAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E+A++ + E +G V +V ++ C G+ +EA +LF M K+L
Sbjct: 425 EKAIQLRSPMEELGLTPDVHTYSV----LIHGFCIKGQMNEASRLFKLM-----VAKKLE 475
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N +N M GYC +G A+ +FR+M E P+ S+ +I+ LCK EAE L
Sbjct: 476 PNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGL 535
Query: 182 YGEMSDKGVNPDEYTYGLLMDA 203
+M D G++P + L+ A
Sbjct: 536 VEKMIDTGIDPSDSILNLISRA 557
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 120/246 (48%), Gaps = 9/246 (3%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
+Y ++ Y + ++ +NE V + V S NN +L + + F++ + F+
Sbjct: 96 LYEVMINAYVQSQSLDSSISYFNEMV-DKGFVPGSNCFNN-LLTFVVGSSSFNQWWRFFN 153
Query: 109 RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
K ++ +++ SF ++ G C G + + ++ ++ E+ SP+ + + LID
Sbjct: 154 ESK------IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
CK G + +A++L+ EM G+ +E+TY +L+ F+ G + KM + G+ PN
Sbjct: 208 CCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPN 267
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVG 287
L YN ++ + + G +A FD M ++ + + +Y ++ L K +E +++
Sbjct: 268 LYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMD 327
Query: 288 GILDDG 293
+ DG
Sbjct: 328 QMKSDG 333
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 106/231 (45%), Gaps = 9/231 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + Y+ L+ GF G L +LK + G+ V Y L+ G+ KG
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR--GLSPSLVTYNILVSGFCKKGDTS 390
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + E E +K S + ++D ++A++L M+ P ++
Sbjct: 391 GAGKVVKEM--EERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTP-----DV 443
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++V+ G+C +G+ +A +F+ M + P+ + +N ++ CK G A L+ E
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFRE 503
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
M +K + P+ +Y +++ + + + KM+D+G+ P+ ++ N +
Sbjct: 504 MEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 148/317 (46%), Gaps = 10/317 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V+Y+ L+ GF + G+ +RLF+E++++ + D + Y +++ G
Sbjct: 349 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKR--KISPDFITYTAVICGLCQT 406
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + ++E V + ++ V +++D C GK EA L ++M P
Sbjct: 407 GRVMEADKLFHEMVCKR--LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTP--- 461
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ +ADG C G A E+ +M + ++N+L++ LCK G + +A +
Sbjct: 462 --NIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 519
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M G +PD TY LMDA + + R+M+D L+P + +N L+
Sbjct: 520 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 579
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
GML++ + M++K M +A +Y ++K + EI G+ G +
Sbjct: 580 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGN 639
Query: 300 ELQEFVKGELSKEGREE 316
+KG +E
Sbjct: 640 TYNILIKGHCKARNMKE 656
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 145/302 (48%), Gaps = 18/302 (5%)
Query: 36 LKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALC 95
L+ +L G + D + Y +++ GY G + ++ E + +K + N V+ LC
Sbjct: 277 LQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEM--QIKGLKPNPYTYNGVILLLC 334
Query: 96 NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
GK EA ++ M +E P + + + DG+C G A +F +M + +
Sbjct: 335 KTGKVAEAERVLREMISEGIAPDGVI-----YTTLIDGFCKLGNVSSAYRLFDEMQKRKI 389
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
SPD +++ +I LC+ G + EA++L+ EM K + PDE TY L+D + ++ + +
Sbjct: 390 SPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFS 449
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
+M+ GL PN+ Y L L + G +D A M +K L+++ +Y ++ L
Sbjct: 450 LHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLC 509
Query: 275 DGGKLDEILEI-----VGGILDDGGIEFSEELQEFVKGELSKEG-REEEVVKLMEKKERE 328
G +D+ +++ V G D + ++ + + K S+E R E+++ M +E +
Sbjct: 510 KAGNIDQAVKLMKDMEVAGFHPD-AVTYTTLMDAYCK---SREMVRAHELLRQMLDRELQ 565
Query: 329 KA 330
Sbjct: 566 PT 567
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 10/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y+ L G + G+ D L E+ K G+ + Y SL+ G
Sbjct: 454 MLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK--GLELNIYTYNSLVNGLCKA 511
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A++ + E + AV +++DA C + + A +L +M + P
Sbjct: 512 GNIDQAVKLMKDM--EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP--- 566
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +FNV+ +G+C G +D ++ + M E P+ ++N+LI Q C + E
Sbjct: 567 --TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 624
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+Y M KGV PD TY +L+ + + + R MV G ++ YN L+
Sbjct: 625 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFY 684
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+ EA+ F+ M ++ L D Y D GK++ LE+
Sbjct: 685 KRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 730
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Query: 98 GKFDEALKLFDRMKN--------------EH-----------------NPPKRLAVNLGS 126
G DEA KLFD+M N H P + N S
Sbjct: 196 GMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTAS 255
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N++ C GR +A ++ +M C PD +S++ +I+ C+ G L +L EM
Sbjct: 256 YNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQ 315
Query: 187 DKGVNPDEYTY-GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
KG+ P+ YTY G+++ C + +V + R+M+ G+ P+ +Y L+ ++G +
Sbjct: 316 IKGLKPNPYTYNGVILLLC-KTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNV 374
Query: 246 DEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDE 281
A FD M K K+ D +Y ++ L G++ E
Sbjct: 375 SSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVME 411
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 149/315 (47%), Gaps = 13/315 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D V Y+ L+ G + + +L E + ++ V + V Y +L+ GY G
Sbjct: 202 RGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKR--KVRPNLVTYNTLIYGYCKTGCT 259
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A + + S V NS++ C K D+A ++ MK P N
Sbjct: 260 GLAHQLIERMI--QSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAP-----N 312
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L ++NV+ G C GR +A E+ +M PD +++N+LI C+N + +A ++
Sbjct: 313 LVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQN 372
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M ++GV PD +Y L A + R D+ M D+G PNL +N L+ L
Sbjct: 373 LMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSR 432
Query: 244 MLDEAKSFFDIMVKKLKMDDA--SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
LDEA+ +M +++ D A +Y+ ++ L G++D+ E++ ++ + GI+
Sbjct: 433 RLDEARHLLAVM-RRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSE-GIQPLVSS 490
Query: 302 QEFVKGELSKEGREE 316
+ L++EG+++
Sbjct: 491 SGTIVHTLAREGKQD 505
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 129/289 (44%), Gaps = 12/289 (4%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
+ + Y+ L+ GF + GD + F+L E+KE+ G D V + S+++ G AM
Sbjct: 103 TNHITYNTLIGGFCKAGDMERAFQLLAEMKER--GHSPDVVTHSSIVQALCNTGNLSRAM 160
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + E+V +V N ++ LC + EA ++ + M P ++ ++
Sbjct: 161 QYFRESV----ECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVP-----DVVTY 211
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + DG C R ++A ++ M + + P+ +++N LI CK G A +L M
Sbjct: 212 NSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQ 271
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G +PD T+ L+ + +++D M PNL YN L+ L G +E
Sbjct: 272 SGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANE 331
Query: 248 AKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
A M + + D +Y ++ ++++ +I +++ G I
Sbjct: 332 ACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVI 380
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 38/300 (12%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G+ + G + +L E + + G D V + SL+ G+ K ++A E
Sbjct: 244 VTYNTLIYGYCKTGCTGLAHQLIERMIQ--SGTHPDVVTFNSLISGFCQKSKIDKACEVL 301
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN--LGSF- 127
+ + + + V N ++ LC+ G+ +EA +L M P + N +G F
Sbjct: 302 H--LMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFC 359
Query: 128 ------------------NVMADG--YCGQG-------RFKDAIEVFRKMGEYRCSPDTL 160
V+ DG YC RF +A + M + P+
Sbjct: 360 RNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLF 419
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+FN+L++ LC + L EA L M G +P TY +L+ + RVDD M
Sbjct: 420 TFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMM 479
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMM---KALSDG 276
V G++P ++ +V L + G D A +FD ++ + K D SY+ ++ K L +G
Sbjct: 480 VSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLEFVKVLREG 539
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 139 RFKDAIEVFRK--MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
R A ++FR +G++ C + +++N LI CK G + A +L EM ++G +PD T
Sbjct: 84 RHHQAYQIFRDELLGQH-CDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVT 142
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
+ ++ A + YFR+ V+ P+ ++N LV L + L EA+ + M
Sbjct: 143 HSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQLSEARQMIEEMS 200
Query: 257 KK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
++ + D +Y ++ L +++E +++
Sbjct: 201 ERGIVPDVVTYNSLIDGLCKSYRMEEARQLL 231
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D A +LFD M K L N
Sbjct: 195 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDGANELFDEML-----VKGLVPNG 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCK G L +A +L E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD++TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 308 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 368 SVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 401
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ DG LF+E+ K G+V +GV + +L+ G+
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVK--GLVPNGVTFTTLIDGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G +A L D M + P +
Sbjct: 261 GRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKF 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 319 -----TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 374 MLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLM 429
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + + AV +
Sbjct: 12 NSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSD 71
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 72 IYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYE 131
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP++ YN L+ +++G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M+ ++ D +Y ++ L K+D E+ +L G +
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFT 251
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 252 TLIDGH-CKNGR 262
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 127/274 (46%), Gaps = 9/274 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y+ L+ G + G D F LF ++ GG + Y +L+ G + + A
Sbjct: 95 DVVSYTTLINGLCKLGRVDAAFDLFRKMVAA-GGCRPNAFTYNALVDGLCKQDRLDAARA 153
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
EA V N+++ AL G+ DEAL F +M E P L SFN
Sbjct: 154 VITEA--RKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVP-----TLVSFN 206
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ G C R DA+EVF +M + P+ ++++ +ID LCK+ L EA++L M +
Sbjct: 207 AIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE 266
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G PD Y L+ R+D R+MV G P++ Y ++ KL +VG +D+A
Sbjct: 267 GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDA 326
Query: 249 KSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
F +++ K + +Y ++ ++DE
Sbjct: 327 HEIFRELVANKCSPNVVTYSALIGGYCRASRVDE 360
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 13/271 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+ F D V Y+ LM + G D F ++ E+ G V V + +++ G
Sbjct: 161 RDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEE--GYVPTLVSFNAIITGLCRARRL 218
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A+E +NE + + + V + V+D LC + + DEA +L DRM +E P +
Sbjct: 219 ADALEVFNEMIDRDFHPNL--VTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRP-----D 271
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L ++ + G+ GR A+ + R+M C PD +++ +ID+LCK G + +A E++
Sbjct: 272 LVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR 331
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ +P+ TY L+ +RVD+G R+M RPN+ YN ++ L V
Sbjct: 332 ELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVD 388
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKAL 273
+EA F M + + DA +Y+ + +AL
Sbjct: 389 RNEEAYGMFREMSECGFVPDARTYRGLKRAL 419
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 143/311 (45%), Gaps = 9/311 (2%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
A V Y+ L+ GF D D F L E+ + G+ + +++G G +A+
Sbjct: 23 ASSVTYNVLIRGFCNASDLDAAFSLLREMDVE--GMQCNDRTTSIILQGLCRCGRVAQAL 80
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E ++ ++ E + + V+ ++++ LC G+ D A LF +M N ++
Sbjct: 81 EHFDASL-ELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGG----CRPNAFTY 135
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + DG C Q R A V + + +PD +++N L+ L + G + EA + +M++
Sbjct: 136 NALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTE 195
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G P ++ ++ R+ D F +M+D PNL Y+ ++ L + LDE
Sbjct: 196 EGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDE 255
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A+ D MV + + D +Y ++ S G+LD L ++ ++ G I V
Sbjct: 256 AQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIP-DVVTYTVVI 314
Query: 307 GELSKEGREEE 317
+L K GR ++
Sbjct: 315 DKLCKVGRVDD 325
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 16/273 (5%)
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A++ + E + S+V N ++ CN D A L M E +
Sbjct: 5 GSHNQALQLFRE---NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEG-----M 56
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY-RCSPDTLSFNNLIDQLCKNGMLAEAE 179
N + +++ G C GR A+E F E PD +S+ LI+ LCK G + A
Sbjct: 57 QCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAF 116
Query: 180 ELYGEM-SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+L+ +M + G P+ +TY L+D + +R+D + P++ YN L+
Sbjct: 117 DLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAA 176
Query: 239 LVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
L Q+G +DEA + F M ++ + S+ ++ L +L + LE+ ++D +F
Sbjct: 177 LFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDR---DF 233
Query: 298 SEELQEF--VKGELSKEGREEEVVKLMEKKERE 328
L + V L K + +E +L+++ E
Sbjct: 234 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE 266
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 53/200 (26%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+LGF G D L + + G + D V Y
Sbjct: 263 MVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ--GCIPDVVTY---------- 310
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
V+D LC G+ D+A ++F + P
Sbjct: 311 ---------------------------TVVIDKLCKVGRVDDAHEIFRELVANKCSP--- 340
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +++ + GYC R + +V R+M C P+ +++N +I L M+ EE
Sbjct: 341 --NVVTYSALIGGYCRASRVDEGGKVMREMA---CRPNVVTYNTMIWGL---SMVDRNEE 392
Query: 181 LYG---EMSDKGVNPDEYTY 197
YG EMS+ G PD TY
Sbjct: 393 AYGMFREMSECGFVPDARTY 412
>gi|255661026|gb|ACU25682.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 376
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G+ D V ++E +KE G V D YG L+ G+ G +++ E
Sbjct: 62 FNXMMXGLFXNGEVDZVISIWELMKES--GFVEDXTTYGILVHGFCKNGYNNKSLHVL-E 118
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ V + A A +++++ C GK D+A+ + + M N +N + +
Sbjct: 119 IAXQXGGV-LDAFAYSAMINGXCKXGKXDKAVSVLNGMIXS-----GCKXNTHVYNALIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G +F+DAI VF+++G CSP +++N LI+ LCK AEA +L EM +KG P
Sbjct: 173 GLXXASKFEDAIRVFKELGTXHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWXP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY LL+ + ++V+ + +++ G P++ ++N L L VG + A +
Sbjct: 233 SXITYSLLIKGLCQDHKVEMALQLWNQVISKGFXPDVQMHNILXHGLCSVGKTZXASELY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ + ++ +M+ G + L I IL +G
Sbjct: 293 FDMNXWNCAPNLVTHNTLMEGFYKXGDIRNALVIWXRILRNG 334
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 127/277 (45%), Gaps = 10/277 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D Y L+ GF ++G ++ + E+ + GGV+ D Y +++ G G +
Sbjct: 89 GFVEDXTTYGILVHGFCKNGYNNKSLHVL-EIAXQXGGVL-DAFAYSAMINGXCKXGKXD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ N + S K + N++++ L KF++A+++F + H P +
Sbjct: 147 KAVSVLNGMI--XSGCKXNTHVYNALINGLXXASKFEDAIRVFKELGTXHCSP-----TI 199
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C RF +A ++ ++M E P ++++ LI LC++ + A +L+ +
Sbjct: 200 VTYNTLINGLCKGERFAEAYDLVKEMLEKGWXPSXITYSLLIKGLCQDHKVEMALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ KG PD + +L V + + + + M PNL +N L+ + G
Sbjct: 260 VISKGFXPDVQMHNILXHGLCSVGKTZXASELYFDMNXWNCAPNLVTHNTLMEGFYKXGD 319
Query: 245 LDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLD 280
+ A + I+ L D SY + L ++
Sbjct: 320 IRNALVIWXRILRNGLXPDIISYNITLIGLCSCNRIS 356
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 98/229 (42%), Gaps = 9/229 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VY+ L+ G + R+F+EL V Y +L+ G
Sbjct: 155 MIXSGCKXNTHVYNALINGLXXASKFEDAIRVFKELGTX--HCSPTIVTYNTLINGLCKG 212
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA + E + + S + + ++ LC + K + AL+L++++ ++ P
Sbjct: 213 ERFAEAYDLVKEMLEKGWXP--SXITYSLLIKGLCQDHKVEMALQLWNQVISKGFXP--- 267
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ N++ G C G+ + A E++ M + C+P+ ++ N L++ K G + A
Sbjct: 268 --DVQMHNILXHGLCSVGKTZXASELYFDMNXWNCAPNLVTHNTLMEGFYKXGDIRNALV 325
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
++ + G+ PD +Y + + NR+ + V + P +
Sbjct: 326 IWXRILRNGLXPDIISYNITLIGLCSCNRISVAILFLXDAVTKNIVPTV 374
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 8/248 (3%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S + AV N++L+ G+ + L++ M E + N+ SFN M G
Sbjct: 19 SKISPDAVVYNAMLNGXFXAGRXKBCFXLWELMXXEG------SXNVASFNXMMXGLFXN 72
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G + I ++ M E D ++ L+ CKNG ++ + G D + Y
Sbjct: 73 GEVDZVISIWELMKESGFVEDXTTYGILVHGFCKNGYNNKSLHVLEIAXQXGGVLDAFAY 132
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMV 256
+++ + + D + M+ SG + N VYN L+ L ++A + F ++
Sbjct: 133 SAMINGXCKXGKXDKAVSVLNGMIXSGCKXNTHVYNALINGLXXASKFEDAIRVFKELGT 192
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
+Y ++ L G + E ++V +L+ G +KG L ++ + E
Sbjct: 193 XHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWXPSXITYSLLIKG-LCQDHKVE 251
Query: 317 EVVKLMEK 324
++L +
Sbjct: 252 MALQLWNQ 259
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G + + L +E+ EK G + Y L+KG E A++ +
Sbjct: 200 VTYNTLINGLCKGERFAEAYDLVKEMLEK--GWXPSXITYSLLIKGLCQDHKVEMALQLW 257
Query: 71 NEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
N+ + G V+M +N + LC+ GK + A +L+ M + P NL + N
Sbjct: 258 NQVISKGFXPDVQM----HNILXHGLCSVGKTZXASELYFDMNXWNCAP-----NLVTHN 308
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ +G+ G ++A+ ++ ++ PD +S+N + LC ++ A + K
Sbjct: 309 TLMEGFYKXGDIRNALVIWXRILRNGLXPDIISYNITLIGLCSCNRISVAILFLXDAVTK 368
Query: 189 GVNPDEYT 196
+ P T
Sbjct: 369 NIVPTVIT 376
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + AE +Y EM++ ++PD Y +++ F R B + M G N+
Sbjct: 1 CESGDIBXAERVYKEMAESKISPDAVVYNAMLNGXFXAGRXKBCFXLWELMXXEG-SXNV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGG---KLDEILEI 285
A +N ++ L G +DZ S +++M + ++D +Y ++ G K +LEI
Sbjct: 60 ASFNXMMXGLFXNGEVDZVISIWELMKESGFVEDXTTYGILVHGFCKNGYNNKSLHVLEI 119
Query: 286 V---GGILD 291
GG+LD
Sbjct: 120 AXQXGGVLD 128
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+B +++M +S + P+ VYN ++ G + +++M + + AS+ M
Sbjct: 6 IBXAERVYKEMAESKISPDAVVYNAMLNGXFXAGRXKBCFXLWELMXXEGSXNVASFNXM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
M L G++DZ++ I + + G +E V G K G + + ++E
Sbjct: 66 MXGLFXNGEVDZVISIWELMKESGFVEDXTTYGILVHG-FCKNGYNNKSLHVLE 118
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 142/294 (48%), Gaps = 16/294 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ ++ G + D +F+++ +K GV D Y L+ GY
Sbjct: 229 MMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK--GVKPDNDTYNCLIHGYLSI 286
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +E + E +K S+L+ LCNNG+ EA LFD M + P
Sbjct: 287 GKWKEVVRMLEEMSAH--GLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKP--- 341
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ + ++ GY +G + ++ M E SPD FN + K M+ EA
Sbjct: 342 --NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M +G++PD YG L+DA ++ RVDD F +M++ G+ PN+ V+N LV L
Sbjct: 400 IFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459
Query: 241 QVGMLDEAKSF-FDIMVKKLKMDDASYKFMMKALSDGG------KLDEILEIVG 287
V ++AK F F+++ + ++ D + ++ L G +L +++E VG
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVG 513
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 152/324 (46%), Gaps = 13/324 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
DP YS L+ F R G + F F + + G + +V L+KG EAM+
Sbjct: 93 DPCTYSILIGCFCRMGRLEHGFATFGLILKS--GWRVNNIVINQLLKGLCDAKRLCEAMD 150
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN---PPKRLAVNLG 125
+ + E V+ N++L CN + +EAL+L M + PP N+
Sbjct: 151 ILVKRMPELGCTP-DVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP-----NVV 204
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
S+ ++ +G+ +G+ A +F +M + P+ +++ +ID LCK ++ AE ++ +M
Sbjct: 205 SYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQM 264
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
DKGV PD TY L+ + + + +M GL+P+ Y L+ L G
Sbjct: 265 IDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRC 324
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
EA+ FD M++K +K + A Y ++ + G L E+ +++ ++ + G+ +
Sbjct: 325 REARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL-NLMVENGLSPDHHIFNI 383
Query: 305 VKGELSKEGREEEVVKLMEKKERE 328
+ +K+ +E + + K +++
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQ 407
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 148/359 (41%), Gaps = 50/359 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + +Y L+ G+ G + L + E G+ D ++ + Y K
Sbjct: 334 MIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN--GLSPDHHIFNIIFTAYAKK 391
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M +EAM +N+ + + V +++DALC G+ D+A+ F++M NE P
Sbjct: 392 AMIDEAMHIFNKM--KQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAP--- 446
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ FN + G C +++ A E + +M PD + FN ++ LC G + +A+
Sbjct: 447 --NIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504
Query: 181 LYGEMS-----------------------------------DKGVNPDEYTYGLLMDACF 205
L M G+ PDE+TY L+
Sbjct: 505 LIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS 265
R+DD FR+M+ +G+ P + Y+ ++ L EAK + M+ K +
Sbjct: 565 RAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIW 624
Query: 266 -YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKGELSKEGREEEVVKL 321
Y ++ LS +DE ++ + +F E+ F + G L K GR E+ + L
Sbjct: 625 IYNIILNGLSKNNCVDEAFKLFQSLCSK---DFQLEITTFNIMIGALFKSGRNEDAMHL 680
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 146/339 (43%), Gaps = 15/339 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y L+ + G D F ++ + GV + V+ SL+ G
Sbjct: 407 QGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNE--GVAPNIFVFNSLVYGLCTVDKW 464
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A E Y E + N ++ V N++L LC G+ +A +L D M+ P +
Sbjct: 465 EKAKEFYFEML--NQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVI--- 519
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+ + G+C GR +A + M PD ++N L+ C+ G + +A ++
Sbjct: 520 --SYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFR 577
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G+ P TY ++ F R + + M+ SG + N+ +YN ++ L +
Sbjct: 578 EMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNN 637
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE--FSEE 300
+DEA F + K +++ ++ M+ AL G+ ++ + + I G + F+
Sbjct: 638 CVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYC 697
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
L + L +EG EE L E+ +R A
Sbjct: 698 L---IAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNA 733
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 95/211 (45%), Gaps = 7/211 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ D Y +L+ GY G ++A + E + + + V +++L L +F
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREML--RNGITPGVVTYSTILHGLFTTRRFS 605
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EA +L+ M N+ +N++ +G +A ++F+ + + +
Sbjct: 606 EAKELYLNMITSGK-----QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
FN +I L K+G +A L+ +S G+ PD +TY L+ + E +++ F M
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAME 720
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
SG PN + N LV +L+ G + A ++
Sbjct: 721 KSGTTPNSRMLNALVRRLLHRGDITRAGAYL 751
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 103/270 (38%), Gaps = 46/270 (17%)
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNL----------------------------------- 124
D+ALKLFD + P +A N
Sbjct: 30 LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89
Query: 125 -----GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+++++ +C GR + F + + + + N L+ LC L EA
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 180 E-LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR---PNLAVYNRL 235
+ L M + G PD +Y L+ R ++ M DS R PN+ Y +
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209
Query: 236 VGKLVQVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+ G +D+A + F ++M + ++ + +Y ++ L +D + ++D G
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 295 IEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ + G LS G+ +EVV+++E+
Sbjct: 270 KPDNDTYNCLIHGYLSI-GKWKEVVRMLEE 298
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 148/306 (48%), Gaps = 41/306 (13%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
+Y+ ++ GF + G D F L +E+KE+ GV D +++ +L++G KG +EA+E +
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKER--GVKMDVLLHSTLIQGLCRKGRIDEALEQF- 57
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+++GE S + + N+V++ LC + DE L+LFD M+ + ++ S++ +
Sbjct: 58 KSMGEECSP--NVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVI 115
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCK-------------------- 171
D C R A E F++M C+P+ +++++LID LCK
Sbjct: 116 DALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMV 175
Query: 172 ---------------NGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
G +E EL M +KG + + ++ A ++ + + +
Sbjct: 176 PRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQF 235
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSD 275
F +++ SG +PN+ YN V L + G +DEA + +++ K+ D +Y ++
Sbjct: 236 FERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCK 295
Query: 276 GGKLDE 281
G++D+
Sbjct: 296 AGRMDK 301
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 146/327 (44%), Gaps = 29/327 (8%)
Query: 1 MFVKG--FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF 58
M +KG V + Y+ ++ GF R G L +KEK G+ + + + +++ +
Sbjct: 167 MQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGI--NIIDFNAMLHALW 224
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+E+A + + + S K + V N + LC GK DEA ++ M P
Sbjct: 225 KNDEQEKACQFFERLL--KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTP- 281
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ +++ + DG+C GR A +VF +M + C P ++F L+ ++ EA
Sbjct: 282 ----DVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREA 337
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
++ +M + G P TY +LMD + V+ + KM +P+ Y L+
Sbjct: 338 FRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQC 397
Query: 239 LVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
L + +DEAK F D+M + + A +++ L G++DE ++ ++
Sbjct: 398 LCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVV------- 450
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEK 324
E+ K G +E V+++E+
Sbjct: 451 ----------EICKAGEPDEAVEVIEQ 467
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 107/256 (41%), Gaps = 25/256 (9%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V + PV + L+ GF S FR+ E++ G + Y LM
Sbjct: 309 MMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVN--AGFIPGLQTYNVLMDCVCGA 366
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E A+E Y++ + + A ++ LC + DEA + D M+ ++ P
Sbjct: 367 DSVESALEIYHKMKRKKRQPDANTYA--PLIQCLCRARRVDEAKEFLDVMEADNVVP--- 421
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N + + + C QG +A V +N++ ++CK G EA E
Sbjct: 422 --NGAICHALVEVLCKQGEVDEACSVL---------------DNVV-EICKAGEPDEAVE 463
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +M KGV PDE TY ++ + ++RVD F KM G P L Y L+G+
Sbjct: 464 VIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEAC 523
Query: 241 QVGMLDEAKSFFDIMV 256
M D+A F+ MV
Sbjct: 524 SADMADDAFRIFEAMV 539
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 112/267 (41%), Gaps = 28/267 (10%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ + G + G D +R+ E+ E V D + Y S++ G+ G ++A + +
Sbjct: 249 VTYNVAVHGLCKAGKVDEAYRILLEMVE--SKVTPDVITYSSIIDGFCKAGRMDKADDVF 306
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ V ++L + K EA ++ + M N P L ++NV+
Sbjct: 307 TRMMVHECIPH--PVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIP-----GLQTYNVL 359
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
D CG + A+E++ KM + PD ++ LI LC+ + EA+E M V
Sbjct: 360 MDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNV 419
Query: 191 NPDEYTYGLLMD----------ACFEVNRV---------DDGATYFRKMVDSGLRPNLAV 231
P+ L++ AC ++ V D+ +MV G+RP+ A
Sbjct: 420 VPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEAT 479
Query: 232 YNRLVGKLVQVGMLDEAKSFFDIMVKK 258
Y ++ L + +D A + F+ M +
Sbjct: 480 YVAVLRSLCGLDRVDSAIAEFEKMASR 506
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 144/320 (45%), Gaps = 10/320 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D Y+ L G + G D F+L +E+ E+LG V D V Y +L+ F
Sbjct: 309 GFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM-EQLGIVSPDVVTYNTLVDACFKCQRSS 367
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ E VK S V +N ++ LC G+ +EAL + M E P ++
Sbjct: 368 DALNLLEEM--REKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTP-----DV 420
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + D C G A + +M DT + N L+ LCK EAEEL
Sbjct: 421 ITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRA 480
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+G PDE +YG +M A F+ + + + +M+ L P+++ YN L+ L +G
Sbjct: 481 PPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGK 540
Query: 245 LDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L EA ++M L DD +Y ++ A G L++ + ++++
Sbjct: 541 LTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNT 600
Query: 304 FVKGELSKEGREEEVVKLME 323
+ G L GR E+ +KL E
Sbjct: 601 LMNG-LCLYGRLEKAMKLFE 619
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 115/241 (47%), Gaps = 8/241 (3%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
AV N++L+A C G EA L RMK E P R ++N + Y G K A
Sbjct: 244 AVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTR-----ATYNTLVSAYARLGWIKQA 298
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VNPDEYTYGLLMD 202
+V M + PD ++N L LC+ G + EA +L EM G V+PD TY L+D
Sbjct: 299 TDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVD 358
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
ACF+ R D +M + G++ +L +N +V L + G L+EA ++M ++ L
Sbjct: 359 ACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTP 418
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
D +Y ++ A G + + ++ ++ G + L + L KE R EE +L
Sbjct: 419 DVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYN-LCKEKRYEEAEEL 477
Query: 322 M 322
+
Sbjct: 478 L 478
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 23/284 (8%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G V D V YG++M YF + E A+ ++E + + +S N+++ L GK
Sbjct: 485 GFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTY--NTLIKGLSTMGKLT 542
Query: 102 EAL-KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
EA+ KL + M+ L + ++N++ YC +G + A + KM E PD +
Sbjct: 543 EAIDKLNELME------MGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVV 596
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+ N L++ LC G L +A +L+ +KG D TY L+ A + N VD +F M
Sbjct: 597 TCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADM 656
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASY-KFMMKALS----- 274
GL+P++ YN L+ L + G EA+ M+ KL Y +F ++
Sbjct: 657 EVRGLQPDVFTYNVLLSALSEAGRSVEAQK----MLHKLNESGKLYGRFFYPSIKSSVEA 712
Query: 275 -DGGKLDEI---LEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
+ GK E+ +E VG D +++ ++E G KE +
Sbjct: 713 VETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAK 756
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 23/322 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEE-LKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+GFV D V Y +M + ++ + L++E +K KL +S Y +L+KG G
Sbjct: 484 RGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSIS---TYNTLIKGLSTMGK 540
Query: 63 EEEAMECYNEAVGENSSVKMSAVAN----NSVLDALCNNGKFDEALKLFDRM-KNEHNPP 117
EA++ NE + +M V + N ++ A C G ++A + ++M +N P
Sbjct: 541 LTEAIDKLNELM------EMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKP- 593
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
++ + N + +G C GR + A+++F E D +++N LI LCK+ +
Sbjct: 594 -----DVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDT 648
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A + +M +G+ PD +TY +L+ A E R + K+ +SG Y +
Sbjct: 649 ALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKS 708
Query: 238 KL--VQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+ V+ G E KS + + D SY +K L GG+L E ++ ++ G
Sbjct: 709 SVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMS 768
Query: 296 EFSEELQEFVKGELSKEGREEE 317
+ ++G + ++ R+
Sbjct: 769 VDNSTYITLMEGLIKRQKRQTH 790
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 10/248 (4%)
Query: 80 VKMSAVANNSVLDALCNNGKFDE--ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
V+ S A N+VL AL + +L F + RL N +FN++ +C +
Sbjct: 168 VRPSLQAANAVLSALARSPSTSPQASLDAFHSLIA-----LRLHPNHYTFNLLVHTHCSK 222
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G DA+ KM + SPD +++N L++ C+ GML EA L M +G+ P TY
Sbjct: 223 GTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATY 282
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-- 255
L+ A + + M G P+L YN L L Q G +DEA D M
Sbjct: 283 NTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQ 342
Query: 256 VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
+ + D +Y ++ A + + L ++ + + G++ S + L +EG+
Sbjct: 343 LGIVSPDVVTYNTLVDACFKCQRSSDALNLLEE-MREKGVKSSLVTHNIIVKGLCREGQL 401
Query: 316 EEVVKLME 323
EE + +E
Sbjct: 402 EEALGRLE 409
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 142/279 (50%), Gaps = 10/279 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D YS L+ G ++G D +LF+E++++ G+ +G+ + +L+ G + AM
Sbjct: 291 PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR--GLRPNGITFTALIDGQCRSRRIDSAM 348
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
Y++ + VK V N++L+ LC G ++A KL D M+ P ++ ++
Sbjct: 349 NTYHQML--TMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKI-----TY 401
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ DGYC +G + A+E+ + M E D ++F LI C++G + +AE EM +
Sbjct: 402 TTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVE 461
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G+ PD+ TY +++D + V G ++M +G +P + YN L+ L + G +
Sbjct: 462 AGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKN 521
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
A + M+ + DD +Y +++ GK +++L++
Sbjct: 522 ANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 147/334 (44%), Gaps = 44/334 (13%)
Query: 41 GGVVSDGVVYGSLMKGYFMKGMEEEAMECY-------------------NEAVGENSSVK 81
G V+ +LM Y+ G +A++C+ ++ + NS V
Sbjct: 147 AGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVT 206
Query: 82 MSAVAN--------------NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + N +++ C G +A +F+ ++ P + SF
Sbjct: 207 IWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTV-----SF 261
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + +G C + + + M E R PD +++ LI LCK G L AE+L+ EM
Sbjct: 262 NTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ 321
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G+ P+ T+ L+D R+D + +M+ G++P+L +YN L+ L +VG +++
Sbjct: 322 RGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNK 381
Query: 248 AKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A+ D M + +K D +Y ++ G L+ +EI G+ ++G + + +
Sbjct: 382 ARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALIS 441
Query: 307 GELSKEGREEEVVKLMEKKEREKAEAKAREAEAA 340
G ++GR V+ E+ RE EA + +A
Sbjct: 442 G-FCRDGR----VRDAERTLREMVEAGMKPDDAT 470
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G D + Y+ L+ G+ ++GD + + + + E+ GVV D V + +L+ G+
Sbjct: 389 MRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEE--GVVLDNVAFTALISGFCRD 446
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK-NEHNPPKR 119
G +A E V + +K V+D C G KL M+ N H P
Sbjct: 447 GRVRDAERTLREMV--EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP--- 501
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ ++NV+ +G C QG+ K+A + M +PD +++N L++ CKNG +AE
Sbjct: 502 ---GVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAE 555
Query: 180 ELYGEMSDKGVNPDEYTYGLLM 201
+L ++KG+ D Y L+
Sbjct: 556 DLLKLRNEKGLIVDYAYYTSLV 577
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 151/320 (47%), Gaps = 20/320 (6%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D +VY+ ++ G+ G D RL ++ V D Y +L++G +G A+
Sbjct: 133 DVMVYNAMVAGYCGAGQLDAARRLVADMP-----VEPDAYTYNTLIRGLCGRGRTSNAL- 186
Query: 69 CYNEAVGEN---SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
AV E+ V +L+A C + +A+KL D M + K A ++
Sbjct: 187 ----AVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHD-----KGCAPDIV 237
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++NV+ +G C +GR +DA+E + + Y C P+T+S+N ++ L +AE+L EM
Sbjct: 238 TYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEM 297
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ KG P+ T+ +L+ V+ +M G PN YN L+ + +
Sbjct: 298 AHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKI 357
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
+A F ++MV + D SY ++ AL G++D +E++ + D G
Sbjct: 358 HKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTV 417
Query: 305 VKGELSKEGREEEVVKLMEK 324
+ G L+K G+ +E ++L+++
Sbjct: 418 IDG-LTKAGKTKEALELLDE 436
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 10/292 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ ++ G + +L EE+ K G + V + L+ +G+ E
Sbjct: 266 GCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHK--GCPPNVVTFNMLISFLCRRGLVE 323
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
AME + ++++ N +L A C K +A++ + M + P ++
Sbjct: 324 PAMEVLEQM--PQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYP-----DI 376
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S+N + C G AIE+ ++ + CSP +S+N +ID L K G EA EL E
Sbjct: 377 VSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDE 436
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ KG+ PD TY + +R+++ F K+ D G+RP A+YN ++ L +
Sbjct: 437 MTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRE 496
Query: 245 LDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
A F M+ M ++++Y +++ L+ G + E E+ + G +
Sbjct: 497 THNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 91/190 (47%), Gaps = 9/190 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ R+G+ D L +LK+K G + Y +++ G
Sbjct: 367 MVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDK--GCSPVLISYNTVIDGLTKA 424
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+E +E + ++ + +++ LC + +EA++ F ++++ P
Sbjct: 425 GKTKEALELLDEMTSKG--LQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRP--- 479
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N + G C + +AI++F M C P+ ++ L++ L G++ EA E
Sbjct: 480 --TAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARE 537
Query: 181 LYGEMSDKGV 190
L+ ++ +GV
Sbjct: 538 LFAQLCSRGV 547
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 15/242 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + Y+ L+ F + E + + G D V Y +L+ G +
Sbjct: 336 GCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSR--GCYPDIVSYNTLLTALCRNGEVD 393
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+E ++ + S + ++ N+V+D L GK EAL+L D M + K L ++
Sbjct: 394 VAIELLHQLKDKGCSPVL--ISYNTVIDGLTKAGKTKEALELLDEMTS-----KGLQPDI 446
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ +A G C + R ++A+ F K+ + P +N ++ LCK A +L+
Sbjct: 447 ITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAY 506
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G P+E TY +L++ V + F ++ G V N+ + K + M
Sbjct: 507 MISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG------VVNKKLMKKGSIKM 560
Query: 245 LD 246
LD
Sbjct: 561 LD 562
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 135/294 (45%), Gaps = 12/294 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGME 63
G D ++ L+ G +G LF++ +G G D V YG+LM G G
Sbjct: 177 GCQPDNTTFNTLIRGLCVEGKIGEALHLFDK---TIGEGFQPDVVTYGTLMNGLCKVGNT 233
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A+ V +N + + +A N+++D+LC + + EA LF M K ++ +
Sbjct: 234 SAAIRLLRSMVQKNC--RPNVIAYNTIIDSLCKDRQVTEAFNLFSEMIT-----KGISPD 286
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + C +K + +M + P+ + F+ ++D LCK GM+A A ++
Sbjct: 287 IFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVD 346
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +GV PD TY LMD + +D+ F MV G PN+ YN L+ Q+
Sbjct: 347 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ 406
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+D+A + M ++ L D +Y ++ L G+L + + ++ G I
Sbjct: 407 RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 460
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 10/287 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF D V Y LM G + G++ RL + +K + + Y +++
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK--NCRPNVIAYNTIIDSLCKDRQV 268
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA ++E + + S + NS++ ALCN ++ L + M N ++ N
Sbjct: 269 TEAFNLFSEMITKGISPDI--FTYNSLIHALCNLCEWKHVTTLLNEMVNS-----KIMPN 321
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + D C +G A +V M + PD +++ L+D C + EA +++
Sbjct: 322 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 381
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M KG P+ +Y +L++ ++ R+D +M GL + YN L+ L VG
Sbjct: 382 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 441
Query: 244 MLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGI 289
L A + F MV ++ D +Y+ ++ L L E + ++ I
Sbjct: 442 RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAI 488
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 100 FDEALKLFDRMKNEHNPPKR---------------------LAVNLGSF---------NV 129
D+AL F+RM + H PP L+ + SF N+
Sbjct: 93 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ + +C R A V K+ + C PD +FN LI LC G + EA L+ + +G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
PD TYG LM+ +V R MV RPN+ YN ++ L + + EA
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL----EIVGGILDDGGIEFSEELQEF 304
+ F M+ K + D +Y ++ AL + + + E+V + + FS
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST----- 327
Query: 305 VKGELSKEGR---EEEVVKLMEKKEREK 329
V L KEG +VV +M K+ E
Sbjct: 328 VVDALCKEGMIAIAHDVVDMMIKRGVEP 355
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 9/252 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D Y+ L+ + V L E+ ++ + VV+ +++ +
Sbjct: 278 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN--SKIMPNVVVFSTVVDALCKE 335
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM A + + + V+ V +++D C + DEA+K+FD M ++ P
Sbjct: 336 GMIAIAHDVVDMMIKR--GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP--- 390
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ S+N++ +GYC R A+ + +M DT+++N LI LC G L A
Sbjct: 391 --NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 448
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM G PD TY +L+D + + + + + + S L ++ VYN + +
Sbjct: 449 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 508
Query: 241 QVGMLDEAKSFF 252
+ G L+ A+ F
Sbjct: 509 RAGELEAARDLF 520
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 154/343 (44%), Gaps = 45/343 (13%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ + ++G D L E++E+ G + V Y L+ G KG E+A
Sbjct: 216 VTYNTMLDSYCKEGRVDQALELLSEMQER--GCYPNDVTYNVLVNGLSKKGELEQAKGLI 273
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK------------ 118
E + NS + +SA N +++ C G F EA L + M N P
Sbjct: 274 EEML--NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLC 331
Query: 119 ------------------RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
+ ++ SFN + GYC G +A +F ++ P +
Sbjct: 332 KWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVI 391
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N LI LC G L A L EM+D+G+ PD +TY +L++ CF++ V +F +M
Sbjct: 392 TYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEM 451
Query: 221 VDSGLRPNLAVYN-RLVGKLVQVGMLDEAKSFF---DIMVKKLKMDDASYKFMMKALSDG 276
+ GL+P+ YN R+VG++ + D + +F +++ D +Y + AL
Sbjct: 452 LSKGLKPDRFAYNTRIVGEM---KIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQ 508
Query: 277 GKLDEILEIVGGILDDG----GIEFSEELQEFVKGELSKEGRE 315
G +E +++ ++ DG + ++ + FVK ++ RE
Sbjct: 509 GNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 137/323 (42%), Gaps = 37/323 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M F D V ++ L+ G+ R G F LF+ELK + +V + Y +L+ G M
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR--DLVPTVITYNTLIHGLCMW 403
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNN-GKFDEALKLFDRMKNEHNPPKR 119
G + A+ E + + ++L C G A F+ M ++ P R
Sbjct: 404 GYLDAALRLKKEMTDQG---LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460
Query: 120 LAVN------------------------------LGSFNVMADGYCGQGRFKDAIEVFRK 149
A N + ++NV C QG F++A ++
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M PD +++ ++I+ KNG L +A E++ EM KGV P TY +L+ A
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+D YF KM++ + N+ YN ++ L +DEA +FD M +K + + SY
Sbjct: 581 LDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTI 640
Query: 269 MMKALSDGGKLDEILEIVGGILD 291
++ + G +E L + +LD
Sbjct: 641 LINESCNMGYWEEALRLYREMLD 663
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
+ VF KM PD + N ++ L +L++A+ +YG M G+ P TY ++D
Sbjct: 164 CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLD 223
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+ + RVD +M + G PN YN LV L + G L++AK + M+ L +
Sbjct: 224 SYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNV 283
Query: 262 DDASYKFMMKALSDGGKLDEILEIV 286
+Y ++ G E ++V
Sbjct: 284 SAYTYNPLINGFCQKGLFVEAFDLV 308
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 120/245 (48%), Gaps = 10/245 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ G+ + G F ++ ++ + G + V Y L+ GY E A+ Y
Sbjct: 154 VTYTSVISGYCKAGRMKDAFSVYNDMLQS--GTRPNTVTYNVLINGYGKALDMESAVRMY 211
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + S V NS++D C G+ D+A++++ M H P N+ +F+++
Sbjct: 212 WQLILH--SCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQP-----NVYTFSII 264
Query: 131 ADGYCGQGRFKDAIEVFRKMG-EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
C Q R +A+ + R++ P T +N +ID LCK G + EA + +M +KG
Sbjct: 265 IHSLCTQNRSAEALSLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKG 324
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+PD+YTY +L+ R+ + T F KMV++G RP+ N + +++ GM +E
Sbjct: 325 CHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDNITINSFISCVLKAGMPNEVH 384
Query: 250 SFFDI 254
I
Sbjct: 385 QIMLI 389
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 143/347 (41%), Gaps = 45/347 (12%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ L+ + G + LFE + G D + ++KG G ++A+E
Sbjct: 49 YNNLLNTLIAHGRAQDAVALFESWIQD-GLYSPDVWSFNVVIKGVCRVGNLQKALELVER 107
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
S + N ++D LC + ++ ++ R++ + N+ ++ +
Sbjct: 108 MTEFGCSP--DTITQNILVDGLCRVKQVNKGHEVLRRLQRD----GVCMPNVVTYTSVIS 161
Query: 133 GYCGQGRFKDAIEVFRKMGE-----------------------------------YRCSP 157
GYC GR KDA V+ M + + C P
Sbjct: 162 GYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPP 221
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
D ++FN+LID C+ G L +A ++ EM + P+ YT+ +++ + NR + +
Sbjct: 222 DVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLL 281
Query: 218 RKM-VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSD 275
R++ + + + P +YN ++ L + G +DEA D+ K D +Y ++
Sbjct: 282 RELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCM 341
Query: 276 GGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
G++ E + + +++ G + + F+ L K G EV ++M
Sbjct: 342 KGRIPEAVTLFHKMVETGCRPDNITINSFISCVL-KAGMPNEVHQIM 387
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 43/216 (19%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y+ L+ G+ + D + R++ +L L D V + SL+ GY
Sbjct: 179 MLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLI--LHSCPPDVVTFNSLIDGYCRC 236
Query: 61 GMEEEAMECYNEAVGENS--------SVKMSAVAN------------------------- 87
G ++AM + E +G++ S+ + ++
Sbjct: 237 GQLDDAMRIWME-MGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTF 295
Query: 88 --NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
N ++D LC GK DEA + M+ + P + ++ ++ G+C +GR +A+
Sbjct: 296 IYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKY-----TYTILIIGHCMKGRIPEAVT 350
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+F KM E C PD ++ N+ I + K GM E ++
Sbjct: 351 LFHKMVETGCRPDNITINSFISCVLKAGMPNEVHQI 386
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 143/297 (48%), Gaps = 21/297 (7%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+YS ++ G +DG LF E+++K G+ + V Y ++ G+ + G A
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDK--GIFPNIVTYNCMIGGFCISGRWSAAQRLL 311
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E + + + V N++++A GKF EA +L+D M P+ + N ++N M
Sbjct: 312 QEML--ERKISPNVVTYNALINAFVKEGKFFEAAELYDEML-----PRGIIPNTITYNSM 364
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DG+C Q R A ++F M CSPD +F LID C + + EL EM +G+
Sbjct: 365 IDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 424
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+ TY L+ V ++ ++M+ SG+ P++ N L+ L G L +A
Sbjct: 425 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 484
Query: 251 FFDIMVKKLKMD-DASYKFMMKALSDGGKLDEILE---IVGGILDDGGIEFSEELQE 303
F M +K KMD DAS+ F G ++L ++ G++++G +EEL E
Sbjct: 485 MFKAM-QKSKMDLDASHPF-------NGVEPDVLTYNILICGLINEGKFLEAEELYE 533
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 135/262 (51%), Gaps = 10/262 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D ++ L+ G+ D L E+ + G+V++ V Y +L+ G+ +
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRR--GLVANTVTYNTLIHGFCLV 441
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEH 114
G A++ + + +S V V N++LD LC+NGK +AL++F M+ +
Sbjct: 442 GDLNAALDLSQQMI--SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 499
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
+P + ++ ++N++ G +G+F +A E++ +M PDT++++++ID LCK
Sbjct: 500 HPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 559
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L EA +++ M K +P+ T+ L++ + RVDDG F +M G+ + +Y
Sbjct: 560 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 619
Query: 235 LVGKLVQVGMLDEAKSFFDIMV 256
L+ +VG ++ A F M+
Sbjct: 620 LIYGFRKVGNINGALDIFQEMI 641
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 148/333 (44%), Gaps = 21/333 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + + Y+ ++ GF + D +F + K G D + +L+ GY
Sbjct: 349 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK--GCSPDVFTFTTLIDGYCGA 406
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++ ME +E + + V N+++ C G + AL L +M + P
Sbjct: 407 KRIDDGMELLHEM--PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP--- 461
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR-----------CSPDTLSFNNLIDQL 169
++ + N + DG C G+ KDA+E+F+ M + + PD L++N LI L
Sbjct: 462 --DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 519
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
G EAEELY EM +G+ PD TY ++D + +R+D+ F M PN+
Sbjct: 520 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNV 579
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGG 288
+N L+ + G +D+ F M ++ + DA Y ++ G ++ L+I
Sbjct: 580 VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQE 639
Query: 289 ILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
++ G + ++ + G SKE E V L
Sbjct: 640 MISSGVYPDTITIRNMLTGFWSKEELERAVAML 672
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 138/286 (48%), Gaps = 9/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + Y + G + GD+ L +++E + + + V+Y +++ G
Sbjct: 208 MVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEE-ISHIKPNVVIYSAIIDGLCKD 266
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++ + E ++ + + V N ++ C +G++ A +L M +++
Sbjct: 267 GRHSDSHNLFIEM--QDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLE-----RKI 319
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ N+ ++N + + + +G+F +A E++ +M P+T+++N++ID CK L AE+
Sbjct: 320 SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 379
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M+ KG +PD +T+ L+D R+DDG +M GL N YN L+
Sbjct: 380 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
VG L+ A M+ + D + ++ L D GKL + LE+
Sbjct: 440 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 485
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 18/218 (8%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E ++ + ++ C+ K AL F ++ P ++ +F + G C
Sbjct: 108 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHP-----DVVTFTTLLHGLC 162
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
R +A+++F ++ C PD L+F L++ LC+ G + EA L M + G+ PD+
Sbjct: 163 LDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQI 218
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVD-SGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-D 253
TYG +D ++ RKM + S ++PN+ +Y+ ++ L + G ++ + F +
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278
Query: 254 IMVKKLKMDDASYKFMMKALSDGGK-------LDEILE 284
+ K + + +Y M+ G+ L E+LE
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLE 316
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 81/187 (43%), Gaps = 4/187 (2%)
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+DAI++F M R P + FN L+ + + LY +M K + D Y++ +
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKL 259
L+ +++ + F K+ GL P++ + L+ L + EA F + +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRP- 180
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
D ++ +M L G++ E + ++ ++++G FV G + K G +
Sbjct: 181 --DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDG-MCKMGDTVSAL 237
Query: 320 KLMEKKE 326
L+ K E
Sbjct: 238 NLLRKME 244
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 168/371 (45%), Gaps = 62/371 (16%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G+ + V Y+ L+ G + RLF + +KLG D V YG+L+KG G
Sbjct: 133 RGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM-QKLG-CTPDVVTYGTLIKGLCGTGNI 190
Query: 64 EEAMECYNEAVGENS----SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
A++ + E + + S + K + + N ++D LC G+ DEA +LF+ MK + P
Sbjct: 191 NIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSI 250
Query: 120 LAVN------------------------------LGSFNVMADGYCGQGRFKDAIEVFRK 149
++ N + +FNV+ D C +G+ +A ++
Sbjct: 251 ISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGV 310
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M E PD +++N+LI+ C G L A EL+ M KG PD +Y +L++ + +
Sbjct: 311 MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLK 370
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKF- 268
V++ + +M+ G RPN+ Y+ L+ + G +D+AK F +M K + + SY +
Sbjct: 371 VEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM-KAHGIAENSYTYG 429
Query: 269 --------------MMKALSDGGKLDEILEI------VGGILDDGGIEFSEELQEFVKGE 308
MK ++ + LEI + G+ G +E + EL E +
Sbjct: 430 IFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE----K 485
Query: 309 LSKEGREEEVV 319
LS EG E VV
Sbjct: 486 LSNEGHEPNVV 496
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 134/289 (46%), Gaps = 14/289 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V D V Y+ L+ GF GD + LF + K G D + Y L+ GY
Sbjct: 311 MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK--GCEPDVISYNVLINGYSKT 368
Query: 61 GMEEEAMECYNEA--VGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
EEAM+ YNE VG+ +V + +S+L + GK D+A KLF MK
Sbjct: 369 LKVEEAMKLYNEMLLVGKRPNV----ITYDSLLKGIFLAGKVDDAKKLFSVMKAH----- 419
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+A N ++ + DG C +A+++F ++ + + N LID LCK G L A
Sbjct: 420 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETA 479
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EL+ ++S++G P+ TY +++ +VD +KM +G P++ YN L+
Sbjct: 480 WELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG 539
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+ L+E M +K + D + ++ LS K E L ++
Sbjct: 540 FYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 10/204 (4%)
Query: 134 YCGQGRFK--DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
+C G A+ F M +P SFN+L+ L K ++ LY +M G++
Sbjct: 42 HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
D T +L++ VNR+ +G F ++ G PN+ YN L+ L + EA
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161
Query: 252 FDIMVKKL--KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG---IEFSEELQEF-- 304
F + ++KL D +Y ++K L G ++ L++ +L+D I + +
Sbjct: 162 F-LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNI 220
Query: 305 VKGELSKEGREEEVVKLMEKKERE 328
+ L K GRE+E +L E+ + +
Sbjct: 221 IVDGLCKVGREDEAKQLFEEMKTQ 244
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 100/265 (37%), Gaps = 52/265 (19%)
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFN--------------------------------- 128
AL F M P +L SFN
Sbjct: 52 HALHFFHLMMRSTPTP-----SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCT 106
Query: 129 --VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
++ + C R ++ F + SP+ +++N LI LC ++EA L+ M
Sbjct: 107 LNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQ 166
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS------GLRPNLAVYNRLVGKLV 240
G PD TYG L+ ++ ++M++ +PN+ YN +V L
Sbjct: 167 KLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLC 226
Query: 241 QVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+VG DEAK F+ M + + SY ++ GK +E ++ +LD G
Sbjct: 227 KVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG---LQP 283
Query: 300 ELQEF--VKGELSKEGREEEVVKLM 322
++ F + L KEG+ E KL+
Sbjct: 284 DMVTFNVLIDTLCKEGKVIEAKKLL 308
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 149/297 (50%), Gaps = 16/297 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE-KLGGVVSDGVVYGSLMKGYFMKGME 63
GFV D V Y+ L+ + G S + E L+E ++ G V Y SL+ Y G+
Sbjct: 134 GFVPDKVTYNTLLDVY---GKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLL 190
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EEAME N+ V +K+ ++L GK + A+++F+ M+ P N
Sbjct: 191 EEAMELKNQMV--ERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKP-----N 243
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN + + +G+F + ++VF ++ C PD +++N L+ +NGM +E ++
Sbjct: 244 ICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFK 303
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G P+ TY L+ A D +++M+D+G+ P+L+ YN ++ L + G
Sbjct: 304 EMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGG 363
Query: 244 MLDEAKSFFDIMVKKL-KMDDASYKFMMKALSDGGKLDEIL----EIVGGILDDGGI 295
+ ++++ M + K ++ ++ ++ A ++G ++ +L EI G+++ +
Sbjct: 364 LWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAV 420
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 113/237 (47%), Gaps = 18/237 (7%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D Y+ L+ V +G +F++++E+ G + Y ++ Y GM
Sbjct: 28 GFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE--GCKPTLITYNVILNVYGKMGMP- 84
Query: 65 EAMECYNEAVG-----ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+N+ G +N+ + N+++ ++EA +F+ MK+ P +
Sbjct: 85 -----WNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDK 139
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ ++N + D Y R K+AIEV R+M CSP +++N+LI ++G+L EA
Sbjct: 140 V-----TYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAM 194
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EL +M ++G+ D +TY ++ + + F +M +G +PN+ +N L+
Sbjct: 195 ELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALI 251
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ ++ GFVR G + R+FEE++ G + + +L+K + +
Sbjct: 200 MVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRT--AGCKPNICTFNALIKMHGNR 257
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E M+ + E + V N++L NG E +F MK P+R
Sbjct: 258 GKFAEMMKVFEEI--KICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPER- 314
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + Y G F A+ ++++M + +PD ++N ++ L + G+ ++E+
Sbjct: 315 ----DTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEK 370
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA 203
+ EM D P+E T+ L+ A
Sbjct: 371 ILAEMQDGMCKPNELTHCSLLHA 393
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
S+N + YC GR K+A +F +M E PD +++N + + M EA ++ M
Sbjct: 526 SYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYM 585
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
G P++ TY ++D ++NR DD + + + L P+++
Sbjct: 586 IKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISSLHE--LDPHIS 628
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+L ++N + + F+ + EV +++ PD +S+N +I C+NG + EA ++
Sbjct: 488 SLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIF 547
Query: 183 GEMSDKGVNPDEYTYGLLM-----DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
EM + G+ PD TY + D+ FE D Y M+ G +PN YN ++
Sbjct: 548 SEMRESGLIPDVITYNTFVASYAADSMFE--EAIDVVCY---MIKHGCKPNQNTYNSVID 602
Query: 238 KLVQVGMLDEAKSFFD 253
++ D+A F
Sbjct: 603 GYCKLNRRDDAIKFIS 618
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 127/321 (39%), Gaps = 45/321 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV + Y+ L+ + R G D +++ + + G+ D Y +++ G+ E
Sbjct: 309 GFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDT--GITPDLSTYNAVLAALARGGLWE 366
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCN---------------------------- 96
++ + E ++ K + + + S+L A N
Sbjct: 367 QSEKILAEM--QDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKT 424
Query: 97 ----NGKFD---EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
N K D EA + F +K + P +L + N M Y + E+
Sbjct: 425 LVLVNSKCDLLLEAERAFLELKRKGFSP-----DLSTLNAMIAIYGRRQMVTKTNEILNF 479
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M E +P ++N+L+ ++ +EE+ E+ KG+ PD +Y ++ A R
Sbjct: 480 MKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGR 539
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+ + + F +M +SGL P++ YN V M +EA M+K K + +Y
Sbjct: 540 MKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNS 599
Query: 269 MMKALSDGGKLDEILEIVGGI 289
++ + D+ ++ + +
Sbjct: 600 VIDGYCKLNRRDDAIKFISSL 620
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%)
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+I+ L K G ++ A L + G PD Y Y L+ AC R + F+KM + G
Sbjct: 4 IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 225 LRPNLAVYNRLVGKLVQVGM 244
+P L YN ++ ++GM
Sbjct: 64 CKPTLITYNVILNVYGKMGM 83
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ KG D + Y+ ++ + R+G +F E++E G++ D + Y + + Y
Sbjct: 515 ILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRE--SGLIPDVITYNTFVASYAAD 572
Query: 61 GMEEEAME--CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
M EEA++ CY G K + NSV+D C + D+A+K + +E +P
Sbjct: 573 SMFEEAIDVVCYMIKHG----CKPNQNTYNSVIDGYCKLNRRDDAIKFISSL-HELDP 625
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT- 215
PD ++ +LI NG EA ++ +M ++G P TY ++++ ++ + T
Sbjct: 31 PDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKITG 90
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALS 274
F M ++G+ P+ YN L+ + + +EA + F D+ D +Y ++
Sbjct: 91 LFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYG 150
Query: 275 DGGKLDEILEIV 286
++ E +E++
Sbjct: 151 KSRRIKEAIEVL 162
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 11/149 (7%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGME 63
GF Y+ LM S+ R E LKE L G+ D + Y +++ Y G
Sbjct: 484 GFTPSLATYNSLMY---MHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRM 540
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA ++E S + + N+ + + + F+EA+ + M P N
Sbjct: 541 KEASHIFSEM--RESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKP-----N 593
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
++N + DGYC R DAI+ + E
Sbjct: 594 QNTYNSVIDGYCKLNRRDDAIKFISSLHE 622
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 10/294 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG+ D + YS ++ G+ R G+ D V++L E++K+K G+ + YGS++
Sbjct: 695 MELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQK--GLKPNSYTYGSIIGLLCRI 752
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA E ++E +G+ + + +++D C G A K F M + P L
Sbjct: 753 CKLAEAEEAFSEMIGQG--ILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVL 810
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + G+C G +A ++F +M PD ++F L++ CK G + +A
Sbjct: 811 -----TYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFR 865
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M G +P+ TY L+D + +D +M GL+PN+ YN +V L
Sbjct: 866 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 925
Query: 241 QVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G ++EA K + L D +Y +M A G++D+ EI+ +L G
Sbjct: 926 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 125/258 (48%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + D +VY+ L+ GF + GD + F E+ + + D + Y +++ G+
Sbjct: 765 MIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSR--DITPDVLTYTAIISGFCQI 822
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + ++E + ++ + +++ C G +A ++ + M P
Sbjct: 823 GDMVEAGKLFHEMLCRG--LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSP--- 877
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + DG C +G A E+ +M + P+ ++N++++ LCK+G + EA +
Sbjct: 878 --NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 935
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L GE G+N D TY LMDA + +D +M+ GL+P + +N L+
Sbjct: 936 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFC 995
Query: 241 QVGMLDEAKSFFDIMVKK 258
GML++ + + M+ K
Sbjct: 996 LHGMLEDGEKLLNWMLAK 1013
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 12/304 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y+ L+ G ++GD D L E+ + G+ + Y S++ G
Sbjct: 870 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI--GLQPNIFTYNSIVNGLCKS 927
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA++ E E + + V +++DA C +G+ D+A ++ M K L
Sbjct: 928 GNIEEAVKLVGEF--EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLG-----KGL 980
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +FNV+ +G+C G +D ++ M +P+ +FN L+ Q C L A
Sbjct: 981 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATA 1040
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+Y +M +GV PD TY L+ + + F++M G +++ Y+ L+
Sbjct: 1041 IYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFF 1100
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ EA+ FD M + L D + F G + D I++ + I+++ ++ E
Sbjct: 1101 KRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVD--E 1158
Query: 300 ELQE 303
+L+E
Sbjct: 1159 QLRE 1162
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 109/235 (46%), Gaps = 7/235 (2%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
V + + N V+ +C G+ +EA L M+ + P ++ S++ + +GYC G
Sbjct: 665 VCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTP-----DVISYSTVINGYCRFGE 719
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
++ KM + P++ ++ ++I LC+ LAEAEE + EM +G+ PD Y
Sbjct: 720 LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTT 779
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG-MLDEAKSFFDIMVKK 258
L+D + + + +F +M + P++ Y ++ Q+G M++ K F +++ +
Sbjct: 780 LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
L+ D ++ +M G + + + ++ G + G L KEG
Sbjct: 840 LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDG-LCKEG 893
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 9/187 (4%)
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV-MADGYCGQGRFKDAIEVFRK 149
L G EA K+F++M N L +++ S NV +A + AI VFR+
Sbjct: 605 FQVLVEFGMLPEARKVFEKMLN-----YGLVLSVDSCNVYLARLSKDCNKTATAIIVFRE 659
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
E + S+N +I +C+ G + EA L M KG PD +Y +++
Sbjct: 660 FPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGE 719
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D KM GL+PN Y ++G L ++ L EA+ F M+ + + D +
Sbjct: 720 LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDT---IV 776
Query: 270 MKALSDG 276
L DG
Sbjct: 777 YTTLVDG 783
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 20/140 (14%)
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM--DACF--------EV 207
D F+ L + GML EA +++ +M + YGL++ D+C +
Sbjct: 597 DPRVFDVFFQVLVEFGMLPEARKVFEKMLN---------YGLVLSVDSCNVYLARLSKDC 647
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASY 266
N+ FR+ + G+ N+A YN ++ + Q+G ++EA +M +K D SY
Sbjct: 648 NKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISY 707
Query: 267 KFMMKALSDGGKLDEILEIV 286
++ G+LD++ +++
Sbjct: 708 STVINGYCRFGELDKVWKLI 727
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 148/326 (45%), Gaps = 24/326 (7%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+YS ++ G +DG L+ E++EK G+ D Y ++ G+ G EA
Sbjct: 250 VIYSAIIDGLWKDGRHSDAHNLYTEMQEK--GIFPDLFTYNCMIDGFCSSGRWSEAQRLL 307
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E + + + V +++++A KF EA +L+D M P+ + N ++N M
Sbjct: 308 QEML--ERKINPNVVTYSALINAYVKERKFFEAEELYDEML-----PRGIIPNTITYNSM 360
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DG+C Q R A +F M CSPD +FN LID C + + EL EM++ G+
Sbjct: 361 IDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGL 420
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
D TY L+ V ++ ++M+ SG+ P++ N L+ L G L +A
Sbjct: 421 VADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 480
Query: 251 FFDIMVKKLKMD-DAS------------YKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
F M +K KMD DAS Y ++ L + GK E E+ + G +
Sbjct: 481 MFKAM-QKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPN 539
Query: 298 SEELQEFVKGELSKEGREEEVVKLME 323
+ + G L K+ R +E ++ +
Sbjct: 540 TITYSSMING-LCKQSRLDEATQMFD 564
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 139/280 (49%), Gaps = 11/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D ++ L+ G+ D L E+ E G+V+D Y +L+ G+ +
Sbjct: 380 MATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTET--GLVADTTTYNTLIHGFCLV 437
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEH 114
G A++ + + +S V V N++LD LC+NGK +AL++F M+ +
Sbjct: 438 GDLNAALDLSQQMI--SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 495
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
P + ++ ++N++ G +G+F +A E++++M P+T++++++I+ LCK
Sbjct: 496 RPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSR 555
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L EA +++ M K +PD T+ L+ + RVDDG F +M G+ + Y
Sbjct: 556 LDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYIT 615
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
L+ +VG ++ A F M+ + D + + M+ L
Sbjct: 616 LIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVL 655
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 151/346 (43%), Gaps = 28/346 (8%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D Y+ ++ GF G RL +E+ E+ + + V Y +L+ Y +
Sbjct: 278 KGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLER--KINPNVVTYSALINAYVKERKF 335
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E Y+E + + + + NS++D C + D A +F M + P +
Sbjct: 336 FEAEELYDEMLPRG--IIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSP-----D 388
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN + DGYCG R D E+ +M E DT ++N LI C G L A +L
Sbjct: 389 VFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQ 448
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS-----------GLRPNLAVY 232
+M GV PD T L+D + ++ D F+ M S G+ P++ Y
Sbjct: 449 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTY 508
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
N L+ L+ G EA+ + M + + + +Y M+ L +LDE ++ +
Sbjct: 509 NILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSM-- 566
Query: 292 DGGIEFSEELQEF---VKGELSKEGREEEVVKLMEKKEREKAEAKA 334
G FS ++ F V G K GR ++ ++L + R A A
Sbjct: 567 -GSKSFSPDVVTFNTLVSG-YCKAGRVDDGLELFCEMGRRGIVADA 610
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 145/333 (43%), Gaps = 21/333 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + + Y+ ++ GF + D +F + K G D + +L+ GY
Sbjct: 345 MLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATK--GCSPDVFTFNTLIDGYCGA 402
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++ E +E + + N+++ C G + AL L +M + P
Sbjct: 403 KRIDDGTELLHEMT--ETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP--- 457
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR-----------CSPDTLSFNNLIDQL 169
++ + N + DG C G+ KDA+E+F+ M + + PD ++N LI L
Sbjct: 458 --DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGL 515
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
G EAEELY EM +G+ P+ TY +++ + +R+D+ F M P++
Sbjct: 516 INEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDV 575
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGG 288
+N LV + G +D+ F M ++ + DA +Y ++ G ++ L+I
Sbjct: 576 VTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQE 635
Query: 289 ILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
++ G + ++ + SKE + V L
Sbjct: 636 MISSGVYPDTITIRSMLTVLWSKEELKRAVAML 668
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 137/305 (44%), Gaps = 15/305 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D V +S L+ G + LF ++ + V + +LM G +G
Sbjct: 142 GFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR------PNVVTFTTLMNGLCREGRVV 195
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN-EHNPPKRLAVN 123
EA+ + V + ++ + + +++D +C G AL L +M+ H P N
Sbjct: 196 EAVALLDRMVEDG--LQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKP-----N 248
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + DG GR DA ++ +M E PD ++N +ID C +G +EA+ L
Sbjct: 249 VVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQ 308
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM ++ +NP+ TY L++A + + + + +M+ G+ PN YN ++ +
Sbjct: 309 EMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQN 368
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LD A+ F +M K D ++ ++ ++D+ E++ + + G + +
Sbjct: 369 RLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYN 428
Query: 303 EFVKG 307
+ G
Sbjct: 429 TLIHG 433
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 92/185 (49%), Gaps = 12/185 (6%)
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+KG+E+ A++ +++ V S S + N ++ + + D + L+ +M+ K
Sbjct: 55 IKGLED-AIDLFSDMV--RSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMER-----K 106
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ ++ SFN++ +C + A+ F K+ + PD ++F+ L+ LC ++EA
Sbjct: 107 QIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEA 166
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+L+ +M P+ T+ LM+ RV + +MV+ GL+PN Y +V
Sbjct: 167 LDLFHQMC----RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 222
Query: 239 LVQVG 243
+ ++G
Sbjct: 223 MCKIG 227
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+DAI++F M R P + FN L+ + + LY +M K + D Y++ +
Sbjct: 58 LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKL 259
L+ +++ + F K+ G +P++ ++ L+ L + EA F M +
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRP- 176
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ ++ +M L G++ E + ++ +++DG
Sbjct: 177 --NVVTFTTLMNGLCREGRVVEAVALLDRMVEDG 208
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 145/336 (43%), Gaps = 21/336 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ +LG+ R G RLF + ++ G Y +L++G GM
Sbjct: 104 GLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQR--GCARTPFTYAALLQGLCGAGMVR 161
Query: 65 EAMEC----YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKR 119
EAM + + +S V + ++ LC G+ EA+ L D M P
Sbjct: 162 EAMAVFAGMWPDGCAPDSHVY------SIMVHGLCGAGRAGEAVALLTDAMGKGFVP--- 212
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ +N + DGYC G + AI++F+ M C P+ ++ LI CK+G + A
Sbjct: 213 ---NVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAM 269
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
LY M + G+ P+ TY L+ ++ M GL PN L+ L
Sbjct: 270 VLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDAL 329
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ G ++EA+ F +V+K +K++ Y M+ AL GK D ++ I+ +G + +
Sbjct: 330 CKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDA 389
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKA 334
+ G L +E + E + L+ +A A
Sbjct: 390 HMYSSLIDG-LCRENKLLEAISLLNDMIESGVQANA 424
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 133/308 (43%), Gaps = 49/308 (15%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + + Y+ L+ GF + G + L+ + E G+ + V Y +L++G +G
Sbjct: 243 KGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIE--AGLAPNVVTYTTLIQGQCSEGHL 300
Query: 64 EEAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E A + EA G + V ++DALC +G+ +EA + + K +
Sbjct: 301 EHAFRLLHSMEACGLAPNEWTCLV----LIDALCKHGRIEEAQQFLGSLVQ-----KGIK 351
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
VN + M D C G+F A + +K+ PD +++LID LC+ L EA L
Sbjct: 352 VNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISL 411
Query: 182 YGEM-------------------------------SDK----GVNPDEYTYGLLMDACFE 206
+M SD+ GV PD TY + + + +
Sbjct: 412 LNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQ 471
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDAS 265
R++D + +M+D G+RPNL YN L+ +G++ +A S M+ K +D S
Sbjct: 472 DGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDES 531
Query: 266 YKFMMKAL 273
Y ++ L
Sbjct: 532 YTVLLGLL 539
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 11/238 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N++L AL +G + L RM P R NL ++ + + YC G A
Sbjct: 47 NTLLMALARHGMLSDMESLAARM------PVR---NLHTYTTLINAYCHAGDLPAAKRHL 97
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ +PD+ ++ + + C+ G+ A A L+ M +G +TY L+
Sbjct: 98 SSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGA 157
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASY 266
V + F M G P+ VY+ +V L G EA + D M K + A Y
Sbjct: 158 GMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVY 217
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ G L+ ++I G+ G + + + G K G+ E + L +
Sbjct: 218 NALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICG-FCKSGKVERAMVLYSR 274
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 123/329 (37%), Gaps = 61/329 (18%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ +GFV D +YS L+ G R+ L ++ E GV ++ V + L+ + ++
Sbjct: 380 IITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIES--GVQANAVPFTILIDKH-LR 436
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++ + ++ + + VK V + + C +G+ ++A + +M + P
Sbjct: 437 EFRSDSPKMISDRMAA-AGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRP--- 492
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP----------------------- 157
NL ++N + GY G A + M + C P
Sbjct: 493 --NLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVA 550
Query: 158 DTLSFNNLIDQ----------------------------LCKNGMLAEAEELYGEMSDKG 189
D++S ++D L K L EA+ M
Sbjct: 551 DSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSAN 610
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ P E Y +++ C+ + + + + MV P L Y ++ L + G AK
Sbjct: 611 LTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAK 670
Query: 250 SFF-DIMVKKLKMDDASYKFMMKALSDGG 277
S F DI+ K+ D+ ++K ++ L G
Sbjct: 671 SIFGDILSKEYNRDEIAWKILIDGLLQKG 699
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 113/288 (39%), Gaps = 54/288 (18%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V Y+ + + +DG + + ++ + GV + Y +L+KGY
Sbjct: 450 MAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDH--GVRPNLTTYNTLIKGYANL 507
Query: 61 GMEEEAM---------------ECYNEAVG----ENS-------SVKMSAVANNSVLDAL 94
G+ +A E Y +G +NS S+ + + + VL+ L
Sbjct: 508 GLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEEL 567
Query: 95 --------CNNGK-----FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA--DGY----- 134
C++ F L DR++ K V + S N+ D Y
Sbjct: 568 LEEVIKLQCSSASYVYDCFIRCLSKVDRLEEA----KSFLVGMQSANLTPSEDVYTCMIE 623
Query: 135 -CGQGRF-KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
C + + K+A+ M + P S+ +I LC+ G A+ ++G++ K N
Sbjct: 624 CCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNR 683
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
DE + +L+D + D + M + RP A+Y+RL G++
Sbjct: 684 DEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEIT 731
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 141/289 (48%), Gaps = 14/289 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G V D ++ L+ GF GD D LF + K G D + Y L+ GY
Sbjct: 298 MMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSK--GYEPDVISYTVLIYGYCKT 355
Query: 61 GMEEEAMECYNEA--VGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
EEAM+ YNE VG+ +K V +L L GK +A KLF +K H PK
Sbjct: 356 FNVEEAMKLYNEMLRVGKWPDMKTFCV----LLKGLFLAGKVGDAKKLFGVVK-PHAVPK 410
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L + +V DG C G +A+E+F ++ Y D SFN LID LCK L A
Sbjct: 411 NLYIC----SVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETA 466
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EL+ ++S +G+ PD TY ++++ + +VD+ F+ M ++G PNL Y+ L+
Sbjct: 467 WELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHG 526
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+ L+E M++K + + + Y + +S K E L+I+
Sbjct: 527 FYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDIL 575
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 122/250 (48%), Gaps = 4/250 (1%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G + D V Y SL+KG M+ EA + + + V +++ LC G +
Sbjct: 156 GYIPDVVTYTSLIKGLCMEHRISEATRLFIRM--QKLGCWPNVVTYGTLIKGLCRTGNIN 213
Query: 102 EALKLFDRMKNEHNP-PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
ALKL M N +P N+ S+N++ D C G++K+A +F +M + PD +
Sbjct: 214 LALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVV 273
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+F+ LID LCK GM+ EA++ M +G+ PD +T+ L++ V +D F M
Sbjct: 274 TFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSM 333
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKL 279
G P++ Y L+ + ++EA ++ M++ K D ++ ++K L GK+
Sbjct: 334 PSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKV 393
Query: 280 DEILEIVGGI 289
+ ++ G +
Sbjct: 394 GDAKKLFGVV 403
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 153/341 (44%), Gaps = 37/341 (10%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G++ D V Y+ L+ G + RLF + +KLG + V YG+L+KG G
Sbjct: 155 RGYIPDVVTYTSLIKGLCMEHRISEATRLFIRM-QKLG-CWPNVVTYGTLIKGLCRTGNI 212
Query: 64 EEAMECYNEAVGENSSVKMSAVAN----NSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
A++ + E + S ++ N N ++D LC GK+ EA +LF+ M ++ P
Sbjct: 213 NLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRP-- 270
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ +F+ + D C +G +A + M PD +F +LI+ C G L A+
Sbjct: 271 ---DVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAK 327
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ M KG PD +Y +L+ + V++ + +M+ G P++ + L+ L
Sbjct: 328 ELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGL 387
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDDASY--KFMMKALSDGGKLDEILE------------- 284
G + +AK F + VK + Y + L G L E +E
Sbjct: 388 FLAGKVGDAKKLFGV-VKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLD 446
Query: 285 ------IVGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
++ G+ +E + EL E +LS+EG + +VV
Sbjct: 447 IESFNCLIDGLCKARKLETAWELFE----KLSQEGLQPDVV 483
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 92/234 (39%), Gaps = 28/234 (11%)
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+AL+ FD M ++ SFN++ + +++KM SP+ +
Sbjct: 79 QALQFFDLMMR----------SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFT 128
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY-GLLMDACFEVNRVDDGATYFRKM 220
N LI+ LC + E + +G PD TY L+ C E +R+ + F +M
Sbjct: 129 LNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCME-HRISEATRLFIRM 187
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-------KLKMDDASYKFMMKAL 273
G PN+ Y L+ L + G ++ A M+ K + SY ++ L
Sbjct: 188 QKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDEL 247
Query: 274 SDGGKLDEILEIVGGILDDG----GIEFSEELQEFVKGELSKEGREEEVVKLME 323
GK E + ++D G + FS + L KEG E K +E
Sbjct: 248 CKIGKWKEAKRLFNEMVDQGVRPDVVTFSALID-----TLCKEGMVIEAKKFLE 296
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 117/231 (50%), Gaps = 7/231 (3%)
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
A C + +A+KL D M+++ P ++ ++NV+ +G C +GR DAIE + +
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTP-----DIVTYNVVVNGICQEGRVDDAIEFLKNLPS 55
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
Y C P+T+S+N ++ LC +AEEL GEM KG P+ T+ +L+ V+
Sbjct: 56 YGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEP 115
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
++ G PN YN L+ + +D+A +F D+MV + D SY ++
Sbjct: 116 ALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLT 175
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
AL G++D +E++ + D G + G L+K G+ +E ++L+
Sbjct: 176 ALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG-LTKAGKTKEALELL 225
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 10/265 (3%)
Query: 30 FRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNS 89
+L +E+++K G D V Y ++ G +G ++A+E + + + V+ N
Sbjct: 12 MKLLDEMRDK--GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNL--PSYGCEPNTVSYNI 67
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
VL LC ++++A +L M + PP N+ +FN++ C +G + A+EV +
Sbjct: 68 VLKGLCTAERWEDAEELMGEMGQKGCPP-----NVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
+ +Y C+P++LS+N L+ CK + +A M +G PD +Y L+ A
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
VD ++ D G P L YN ++ L + G EA + MV K L+ D +Y
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242
Query: 269 MMKALSDGGKLDEILEIVGGILDDG 293
+ L ++++ + G + D G
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMG 267
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 10/251 (3%)
Query: 34 EELKEKLG--GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
EEL ++G G + V + L+ KG+ E A+E + ++++ N +L
Sbjct: 82 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI--PKYGCTPNSLSYNPLL 139
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
A C K D+A+ D M + P ++ S+N + C G A+E+ ++
Sbjct: 140 HAFCKQKKMDKAMAFLDLMVSRGCYP-----DIVSYNTLLTALCRSGEVDVAVELLHQLK 194
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ C+P +S+N +ID L K G EA EL EM KG+ PD TY + +R++
Sbjct: 195 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 254
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM-DDASYKFMM 270
D F K+ D G+RPN +YN ++ L + A F M+ M ++++Y ++
Sbjct: 255 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 314
Query: 271 KALSDGGKLDE 281
+ L+ G + E
Sbjct: 315 EGLAYEGLIKE 325
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ R G+ D L +LK+K G + Y +++ G
Sbjct: 158 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK--GCAPVLISYNTVIDGLTKA 215
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+E NE V + ++ + +++ LC + ++A++ F ++++ P
Sbjct: 216 GKTKEALELLNEMVSK--GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP--- 270
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +N + G C + AI++F M C P+ ++ LI+ L G++ EA +
Sbjct: 271 --NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 328
Query: 181 LYGEMSDKGV 190
L E+ +GV
Sbjct: 329 LLDELCSRGV 338
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 154/343 (44%), Gaps = 45/343 (13%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ + ++G D L E++E+ G + V Y L+ G KG E+A
Sbjct: 216 VTYNTMLDSYCKEGRVDQALELLSEMQER--GCYPNDVTYNVLVNGLSKKGELEQAKGLI 273
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK------------ 118
E + NS + +SA N +++ C G F EA L + M N P
Sbjct: 274 EEML--NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLC 331
Query: 119 ------------------RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
+ ++ SFN + GYC G +A +F ++ P +
Sbjct: 332 KWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVI 391
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N LI LC G L A L EM+D+G+ PD +TY +L++ CF++ V +F +M
Sbjct: 392 TYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEM 451
Query: 221 VDSGLRPNLAVYN-RLVGKLVQVGMLDEAKSFF---DIMVKKLKMDDASYKFMMKALSDG 276
+ GL+P+ YN R+VG++ + D + +F +++ D +Y + AL
Sbjct: 452 LSKGLKPDRFAYNTRIVGEM---KIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQ 508
Query: 277 GKLDEILEIVGGILDDG----GIEFSEELQEFVKGELSKEGRE 315
G +E +++ ++ DG + ++ + FVK ++ RE
Sbjct: 509 GNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 137/323 (42%), Gaps = 37/323 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M F D V ++ L+ G+ R G F LF+ELK + +V + Y +L+ G M
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR--DLVPTVITYNTLIHGLCMW 403
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNN-GKFDEALKLFDRMKNEHNPPKR 119
G + A+ E + + ++L C G A F+ M ++ P R
Sbjct: 404 GYLDAALRLKKEMTDQG---LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460
Query: 120 LAVN------------------------------LGSFNVMADGYCGQGRFKDAIEVFRK 149
A N + ++NV C QG F++A ++
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M PD +++ ++I+ KNG L +A E++ EM KGV P TY +L+ A
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+D YF KM++ + N+ YN ++ L +DEA +FD M +K + + SY
Sbjct: 581 LDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTI 640
Query: 269 MMKALSDGGKLDEILEIVGGILD 291
++ + G +E L + +LD
Sbjct: 641 LINESCNMGYWEEALRLYREMLD 663
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
+ VF KM PD + N ++ L +L++A+ +YG M G+ P TY ++D
Sbjct: 164 CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLD 223
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+ + RVD +M + G PN YN LV L + G L++AK + M+ L +
Sbjct: 224 SYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNV 283
Query: 262 DDASYKFMMKALSDGGKLDEILEIV 286
+Y ++ G E ++V
Sbjct: 284 SAYTYNPLINGFCQKGLFVEAFDLV 308
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 143/286 (50%), Gaps = 13/286 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ + + G + L E+++E G V Y +L+ G+ ++G + A+E +
Sbjct: 388 VTFNTFICILCQKGLIEQAIMLIEQMQEH--GCTVGVVTYNALVNGFCVQGHIDSALELF 445
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ K + + ++L LCN + D A +L M + PP N+ +FNV+
Sbjct: 446 -----RSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPP-----NVVTFNVL 495
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+ +C +G +AIE+ +M E+ C+P+ +++N L D + K+ +A EL + KGV
Sbjct: 496 VNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGV 555
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+PD T+ ++ + +RV++ F D G+RP VYN+++ L + +D A
Sbjct: 556 SPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAID 615
Query: 251 FFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
F MV M ++++Y +++ L+ G L E +++ + G +
Sbjct: 616 FLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVV 661
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 149/323 (46%), Gaps = 14/323 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ G+ R G D RL + V D Y L++ +G
Sbjct: 105 GSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP-----VAPDAYTYTPLIRVLCDRGRVA 159
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ ++ + + + V +L+A+C N F++A+ + D M+ + P N+
Sbjct: 160 DALSLLDDML--RRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTP-----NI 212
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++NV+ +G C +GR DA ++ ++ Y C PDT+S+ L+ LC + + EEL+ E
Sbjct: 213 VTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAE 272
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +K P+E T+ +L+ V+ ++M + N + N ++ + + G
Sbjct: 273 MMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGR 332
Query: 245 LDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+D+A F + M D SY ++K L + ++ E++ ++ +
Sbjct: 333 VDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNT 392
Query: 304 FVKGELSKEGREEEVVKLMEKKE 326
F+ L ++G E+ + L+E+ +
Sbjct: 393 FI-CILCQKGLIEQAIMLIEQMQ 414
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 124/294 (42%), Gaps = 19/294 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ ++ G R+G D L L G D V Y +L+KG
Sbjct: 203 MRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSY--GCQPDTVSYTTLLKGLCAS 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL----CNNGKFDEALKLFDRMKNEHNP 116
++ E + E + +N + N D L C G + A+++ +M EH
Sbjct: 261 KRWDDVEELFAEMMEKN------CMPNEVTFDMLIRFFCRGGMVERAIQVLQQM-TEH-- 311
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
A N N++ + C QGR DA + MG Y C+PDT+S+ ++ LC+
Sbjct: 312 --ECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWN 369
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A+EL EM P+E T+ + + ++ +M + G + YN LV
Sbjct: 370 DAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALV 429
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
G +D A F M K + +Y ++ L + +LD E+V +L
Sbjct: 430 NGFCVQGHIDSALELFRSM--PCKPNTITYTTLLTGLCNAERLDAAAELVAEML 481
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 143/297 (48%), Gaps = 21/297 (7%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+YS ++ G +DG LF E+++K G+ + V Y ++ G+ + G A
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDK--GIFPNIVTYNCMIGGFCISGRWSAAQRLL 311
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E + + + V N++++A GKF EA +L+D M P+ + N ++N M
Sbjct: 312 QEML--ERKISPNVVTYNALINAFVKEGKFFEAAELYDEML-----PRGIIPNTITYNSM 364
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DG+C Q R A ++F M CSPD +F LID C + + EL EM +G+
Sbjct: 365 IDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 424
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+ TY L+ V ++ ++M+ SG+ P++ N L+ L G L +A
Sbjct: 425 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 484
Query: 251 FFDIMVKKLKMD-DASYKFMMKALSDGGKLDEILE---IVGGILDDGGIEFSEELQE 303
F M +K KMD DAS+ F G ++L ++ G++++G +EEL E
Sbjct: 485 MFKAM-QKSKMDLDASHPF-------NGVEPDVLTYNILICGLINEGKFLEAEELYE 533
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 154/343 (44%), Gaps = 22/343 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + + Y+ ++ GF + D +F + K G D + +L+ GY
Sbjct: 349 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK--GCSPDVFTFTTLIDGYCGA 406
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++ ME +E + + V N+++ C G + AL L +M + P
Sbjct: 407 KRIDDGMELLHEM--PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP--- 461
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR-----------CSPDTLSFNNLIDQL 169
++ + N + DG C G+ KDA+E+F+ M + + PD L++N LI L
Sbjct: 462 --DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 519
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
G EAEELY EM +G+ PD TY ++D + +R+D+ F M PN+
Sbjct: 520 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNV 579
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGG 288
+N L+ + G +D+ F M ++ + DA Y ++ G ++ L+I
Sbjct: 580 VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQE 639
Query: 289 ILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAE 331
++ G + ++ + G SKE E V ++E +R + E
Sbjct: 640 MISSGVYPDTITIRNMLTGFWSKE-ELERAVAMLEDLQRYQLE 681
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 138/286 (48%), Gaps = 9/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + Y + G + GD+ L +++E + + + V+Y +++ G
Sbjct: 208 MVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEE-ISHIKPNVVIYSAIIDGLCKD 266
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++ + E ++ + + V N ++ C +G++ A +L M +++
Sbjct: 267 GRHSDSHNLFIEM--QDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLE-----RKI 319
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ N+ ++N + + + +G+F +A E++ +M P+T+++N++ID CK L AE+
Sbjct: 320 SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 379
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M+ KG +PD +T+ L+D R+DDG +M GL N YN L+
Sbjct: 380 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
VG L+ A M+ + D + ++ L D GKL + LE+
Sbjct: 440 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 485
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 18/218 (8%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E ++ + ++ C+ K AL F ++ P ++ +F + G C
Sbjct: 108 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHP-----DVVTFTTLLHGLC 162
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
R +A+++F ++ C PD L+F L++ LC+ G + EA L M + G+ PD+
Sbjct: 163 LDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQI 218
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVD-SGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-D 253
TYG +D ++ RKM + S ++PN+ +Y+ ++ L + G ++ + F +
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278
Query: 254 IMVKKLKMDDASYKFMMKALSDGGK-------LDEILE 284
+ K + + +Y M+ G+ L E+LE
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLE 316
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 81/187 (43%), Gaps = 4/187 (2%)
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+DAI++F M R P + FN L+ + + LY +M K + D Y++ +
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKL 259
L+ +++ + F K+ GL P++ + L+ L + EA F + +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRP- 180
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
D ++ +M L G++ E + ++ ++++G FV G + K G +
Sbjct: 181 --DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDG-MCKMGDTVSAL 237
Query: 320 KLMEKKE 326
L+ K E
Sbjct: 238 NLLRKME 244
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 12/293 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGME 63
G D ++ L+ G +G LF++ +G G D V YG+LM G G
Sbjct: 215 GCQPDNTTFNTLIRGLCVEGKIGEALHLFDK---TIGEGFQPDVVTYGTLMNGLCKVGNT 271
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A+ V +N + + +A N+++D+LC + + EA LF M K ++ +
Sbjct: 272 SAAIRLLRSMVQKNC--RPNVIAYNTIIDSLCKDRQVTEAFNLFSEMIT-----KGISPD 324
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + C +K + +M + P+ + F+ ++D LCK GM+A A ++
Sbjct: 325 IFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVD 384
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +GV PD TY LMD + +D+ F MV G PN+ YN L+ Q+
Sbjct: 385 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ 444
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+D+A + M ++ L D +Y ++ L G+L + + ++ G I
Sbjct: 445 RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI 497
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 130/282 (46%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D Y+ L+ + V L E+ ++ + VV+ +++ +
Sbjct: 316 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS--KIMPNVVVFSTVVDALCKE 373
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM A + + + V+ V +++D C + DEA+K+FD M ++ P
Sbjct: 374 GMIAIAHDVVDMMI--KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP--- 428
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ S+N++ +GYC R A+ + +M DT+++N LI LC G L A
Sbjct: 429 --NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 486
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM G PD TY +L+D + + + + + + S L ++ VYN + +
Sbjct: 487 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 546
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ G L+ A+ F ++ K L+ D +Y M+ L G LDE
Sbjct: 547 RAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDE 588
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 7/211 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
GV D V Y +LM G+ ++ +EA++ ++ V + + + N +++ C + D
Sbjct: 390 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY--NILINGYCQIQRMD 447
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A+ L ++M + L + ++N + G C GR + AI +F +M PD ++
Sbjct: 448 KAMGLLEQMSLQ-----GLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 502
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ L+D LCKN LAEA L + ++ D Y + +D ++ F +
Sbjct: 503 YRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLS 562
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
GL+P++ YN ++ L + G+LDEA F
Sbjct: 563 SKGLQPDVRTYNIMIHGLCKRGLLDEANKLF 593
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 109/264 (41%), Gaps = 43/264 (16%)
Query: 100 FDEALKLFDRMKNEHNPPKR---------------------LAVNLGSF---------NV 129
D+AL F+RM + H PP L+ + SF N+
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ + +C R A V K+ + C PD +FN LI LC G + EA L+ + +G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
PD TYG LM+ +V R MV RPN+ YN ++ L + + EA
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL----EIVGGILDDGGIEFSEELQEF 304
+ F M+ K + D +Y ++ AL + + + E+V + + FS
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST----- 365
Query: 305 VKGELSKEGR---EEEVVKLMEKK 325
V L KEG +VV +M K+
Sbjct: 366 VVDALCKEGMIAIAHDVVDMMIKR 389
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 130/288 (45%), Gaps = 17/288 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ LM G + D ++F+ + K G V + Y L+ GY
Sbjct: 386 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK--GCVPNVRSYNILINGYCQI 443
Query: 61 GMEEEAMECYNEAVGENSSVK---MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
++AM + E S++ V N+++ LC+ G+ A+ LF M P
Sbjct: 444 QRMDKAM-----GLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 498
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+L ++ ++ D C +A+ + + + D L +N ID +C+ G L
Sbjct: 499 -----DLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 553
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV- 236
A +L+ +S KG+ PD TY +++ + +D+ FRKM ++G + +YN ++
Sbjct: 554 ARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIR 613
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILE 284
G L + +++ + D ++ +++ LSD G LD+ E
Sbjct: 614 GFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG-LDQSFE 660
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 118 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 175
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D A LFD M K L N
Sbjct: 176 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDGANGLFDEML-----VKGLVPNG 228
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCK G L +A +L E
Sbjct: 229 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 288
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD++TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 289 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 348
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 349 SVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKG 382
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ DG LF+E+ K G+V +GV + +L+ G+
Sbjct: 184 MLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVK--GLVPNGVTFTTLIDGHCKN 241
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G +A L D M + P +
Sbjct: 242 GRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKF 299
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 300 -----TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 354
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 355 MLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 410
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 1/155 (0%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E+
Sbjct: 56 FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 115
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP++ YN L+ +++G LD
Sbjct: 116 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 175
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
E M+ ++ D +Y ++ L K+D
Sbjct: 176 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMD 210
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 167/340 (49%), Gaps = 13/340 (3%)
Query: 2 FVK-GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
F+K G V D +Y+ L+ GF ++GD + +L++E+ G+ + VVY +L+ G
Sbjct: 652 FLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH--NGINPNIVVYNTLINGLCKL 709
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A E ++E E + V ++++D C +G EA KLFD M ++ P
Sbjct: 710 GEVTKARELFDEI--EEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGY 767
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ DG +G + A+ +F + + + +FN+LID CK+G + EA E
Sbjct: 768 I-----YCILIDGCGKEGNLEKALSLFHE-AQQKSVGSLSAFNSLIDSFCKHGKVIEARE 821
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ +M DK + P+ TY +L+DA + +++ F M + PN Y L+
Sbjct: 822 LFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYN 881
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
Q+G + S F D+ + + D +Y M A GK E L+++ L + GI+ +
Sbjct: 882 QIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVE-GIKLED 940
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
++ + + L KE + V++L+ + +E+ ++
Sbjct: 941 DVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNT 980
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 146/324 (45%), Gaps = 15/324 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ ++ G + G+ LF E+ + G+ D Y L+ GY
Sbjct: 372 MITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML--MAGLEPDTWTYNLLIDGYLKS 429
Query: 61 GMEEEAMECYNEAVGENSSVKM--SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ A C E + E + K+ S + ++ LC++ +A ++ D+M P
Sbjct: 430 --HDMAKAC--ELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP- 484
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N+ + + Y + R++ AIE+ + M PD +N LI LC+ + EA
Sbjct: 485 ----NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA 540
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ L +M +KG+ P+ +TYG ++ + + YF+ M+ SG+ PN +Y L+
Sbjct: 541 KMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKG 600
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
VG EA S F M++K L D +Y ++ +LS GK E + + L G +
Sbjct: 601 HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPD 660
Query: 298 SEELQEFVKGELSKEGREEEVVKL 321
+ G KEG E+ +L
Sbjct: 661 VFLYNSLISG-FCKEGDIEKASQL 683
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 137/288 (47%), Gaps = 11/288 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VVY+ L+ G + G+ LF+E++EK +V D V Y +++ GY
Sbjct: 687 MLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEK--DLVPDVVTYSTIIDGYCKS 744
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + ++E + + + ++D G ++AL LF H ++
Sbjct: 745 GNLTEAFKLFDEMISK--GISPDGYIYCILIDGCGKEGNLEKALSLF------HEAQQKS 796
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L +FN + D +C G+ +A E+F M + + +P+ +++ LID K M+ EAE+
Sbjct: 797 VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQ 856
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ +M + + P+ TY L+ + ++ + F+ M G+ + Y +
Sbjct: 857 LFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYC 916
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
+ G EA + +V+ +K++D + ++ L ++ +LE++
Sbjct: 917 KEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLS 964
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 139/288 (48%), Gaps = 9/288 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + Y + + + G+ R F+++ G+V + V+Y L+KG+ G
Sbjct: 550 KGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLS--SGIVPNNVIYTILIKGHCDVGNT 607
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA+ + + + + A + +++ +L NGK EA+ +F + P +
Sbjct: 608 VEALSTFKCMLEKGLIPDIRAYS--AIIHSLSKNGKTKEAMGVFLKFLKTGVVP-----D 660
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +N + G+C +G + A +++ +M +P+ + +N LI+ LCK G + +A EL+
Sbjct: 661 VFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFD 720
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ +K + PD TY ++D + + + F +M+ G+ P+ +Y L+ + G
Sbjct: 721 EIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 780
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
L++A S F +K +++ ++ + GK+ E E+ ++D
Sbjct: 781 NLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVD 828
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 7/184 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+V+ A C G + + M+ E P NL ++N G C G +A+EV
Sbjct: 246 TNVIKAHCKVGDVIKGKMVLSEMEKECKP------NLFTYNAFIGGLCQTGAVDEALEVK 299
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ M E PD ++ L+D CK EA+ ++ M G+NP+ +TY L+D +
Sbjct: 300 KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE 359
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASY 266
+++ +M+ GL+ N+ YN ++G + + G + +A S F+ +++ L+ D +Y
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTY 419
Query: 267 KFMM 270
++
Sbjct: 420 NLLI 423
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 78 SSVKMSA---VANNSVLDA-LCNNGKFDEALKLFDRMKNEHNPPKRL------------A 121
SS KMS + + S+L LCN+G +A + +++ PP +
Sbjct: 110 SSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGG 169
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
NL F++ D + G +A VF P + NNL+ L K M+ ++
Sbjct: 170 SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKV 229
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
YG M + + PD YTY ++ A +V V G +M + +PNL YN +G L Q
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQ 288
Query: 242 VGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
G +DEA +M++K L D +Y ++
Sbjct: 289 TGAVDEALEVKKLMMEKGLGPDGHTYTLLV 318
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 96/205 (46%), Gaps = 6/205 (2%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
++D C + EA +F+ M + P R ++ + DG+ +G ++A+ + +
Sbjct: 317 LVDGFCKQKRSKEAKLIFESMPSSGLNPNRF-----TYTALIDGFIKEGNIEEALRIKDE 371
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M + +++N +I + K G +A+A L+ EM G+ PD +TY LL+D + +
Sbjct: 372 MITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHD 431
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+ +M L P+ Y+ L+ L L +A D M++ +K + Y
Sbjct: 432 MAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGT 491
Query: 269 MMKALSDGGKLDEILEIVGGILDDG 293
++KA + + +E++ ++ +G
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANG 516
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 123/306 (40%), Gaps = 46/306 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D +Y L+ G ++G+ + LF E ++K G +S
Sbjct: 757 MISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS--------------- 801
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
A NS++D+ C +GK EA +LFD M + K+L
Sbjct: 802 -------------------------AFNSLIDSFCKHGKVIEARELFDDMVD-----KKL 831
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ ++ D Y ++A ++F M P+TL++ +L+ + G +
Sbjct: 832 TPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMIS 891
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ +M +G+ D YG++ A + + + K + G++ V++ L+ L
Sbjct: 892 LFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC 951
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ + M K +L + + ++ G DE +++G + G + S
Sbjct: 952 KEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSL 1011
Query: 300 ELQEFV 305
L + +
Sbjct: 1012 SLTDSI 1017
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 139/276 (50%), Gaps = 10/276 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y L+ G R G D ++L+E++ + + + VVY SL++ +F G +E+ +
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLD--ANQIPNAVVYTSLIRNFFKCGRKEDGHK 535
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
YNE + S + + N+ +D + G+ ++ LF +KN P + S+
Sbjct: 536 IYNEMLRLGCSPDLLLL--NTYMDCVFKAGEIEKGRALFQEIKNLGFIP-----DARSYT 588
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
++ G G +A E+F M E C DT ++N +ID CK+G + +A +L EM K
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G P TYG ++D +++R+D+ F + G+ N+ +Y+ L+ +VG +DEA
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708
Query: 249 KSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEIL 283
++M K L + ++ ++ AL ++ E L
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEAL 744
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 149/322 (46%), Gaps = 24/322 (7%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P Y+Y +++G+ G + + L E + K G + V Y ++ KG +EA+
Sbjct: 338 PCAYAYNTMIMGYGMAGKFEDAYSLLERQRRK--GCIPSVVSYNCILSCLGRKGQVDEAL 395
Query: 68 ECYNEAVGENSSVKMSAVAN----NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ + E +K A+ N N ++D LC GK + AL + D MK+ P N
Sbjct: 396 KKFEE-------MKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFP-----N 443
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + N+M D C R DA +F + C PD +++ +LI+ L ++G + EA +LY
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M D P+ Y L+ F+ R +DG + +M+ G P+L + N + + + G
Sbjct: 504 QMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAG 563
Query: 244 MLDEAKSFFDIMVKKLKM--DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+++ ++ F +K L D SY ++ L G E E+ + + G + +
Sbjct: 564 EIEKGRALFQ-EIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAY 622
Query: 302 QEFVKGELSKEGREEEVVKLME 323
+ G K G+ + +L+E
Sbjct: 623 NTVIDG-FCKSGKVNKAYQLLE 643
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 135/275 (49%), Gaps = 10/275 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF+ D Y+ L+ G V+ G + + LF +KE+ G V D Y +++ G+ G
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ--GCVLDTRAYNTVIDGFCKSGKVN 636
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + E + + + V SV+D L + DEA LF+ K+ K + +N+
Sbjct: 637 KAYQLLEEM--KTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS-----KGIELNV 689
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG+ GR +A + ++ + +P+ ++N L+D L K ++EA +
Sbjct: 690 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQS 749
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M D P+ TY +L+ ++ + + ++++M G +PN+ Y ++ L + G
Sbjct: 750 MKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGN 809
Query: 245 LDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGK 278
+ EA + F+ +K + D A Y +++ LS+ +
Sbjct: 810 IVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANR 844
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 149/314 (47%), Gaps = 12/314 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ + +++ L+ F R+G D L +E+K + D V+Y + + G +
Sbjct: 230 GYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKS--NSLEPDVVLYNVCIDCFGKAGKVD 287
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + ++E + + + + V S++ LC + +EA++LF+ M P A
Sbjct: 288 MAWKFFHEM--KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYA--- 342
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+N M GY G+F+DA + + C P +S+N ++ L + G + EA + + E
Sbjct: 343 --YNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + P+ TY +++D + +++ M D+GL PN+ N +V +L +
Sbjct: 401 MKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQR 459
Query: 245 LDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
LD+A S F+ + K + D +Y +++ L G++DE ++ +LD I +
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519
Query: 304 FVKGELSKEGREEE 317
++ K GR+E+
Sbjct: 520 LIRN-FFKCGRKED 532
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 12/258 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDS-DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
M G V D V Y+ M+G + D + LFE + + V Y +++ GY M
Sbjct: 296 MKANGLVLDDVTYTS-MIGVLCKADRLNEAVELFEHMDQ--NKQVPCAYAYNTMIMGYGM 352
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G E+A S V+ N +L L G+ DEALK F+ MK + P
Sbjct: 353 AGKFEDAYSLLERQ--RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP--- 407
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
NL ++N+M D C G+ + A+ V M + P+ ++ N ++D+LCK L +A
Sbjct: 408 ---NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC 464
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
++ + K PD TY L++ RVD+ + +M+D+ PN VY L+
Sbjct: 465 SIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF 524
Query: 240 VQVGMLDEAKSFFDIMVK 257
+ G ++ ++ M++
Sbjct: 525 FKCGRKEDGHKIYNEMLR 542
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 119/250 (47%), Gaps = 9/250 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D Y+ ++ GF + G + ++L EE+K K G V YGS++ G
Sbjct: 613 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK--GHEPTVVTYGSVIDGLAKIDRL 670
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + EA ++ ++++ V +S++D G+ DEA + + + K L N
Sbjct: 671 DEAYMLFEEA--KSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ-----KGLTPN 723
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + D +A+ F+ M + +C+P+ ++++ LI LCK +A +
Sbjct: 724 VYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQ 783
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +G P+ +TY ++ + + + T F K + G + A+YN ++ L
Sbjct: 784 EMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNAN 843
Query: 244 MLDEAKSFFD 253
+A F+
Sbjct: 844 RASDAYRLFE 853
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 9/217 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V Y ++ G + D + LFEE K K G+ + V+Y SL+ G+
Sbjct: 645 MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK--GIELNVVIYSSLIDGFGKV 702
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA E + + + N +LDAL + EAL F MK+ P
Sbjct: 703 GRIDEAYLIMEELM--QKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTP--- 757
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +++++ G C +F A +++M + P+ ++ +I L K G + EA+
Sbjct: 758 --NYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADT 815
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
L+ + +KG D Y +++ NR D F
Sbjct: 816 LFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLF 852
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 6/200 (3%)
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
A +++ AL + D L LF +M+ AVN+ F + + +GR A+
Sbjct: 202 AYTNLIGALSTSRDSDCMLTLFQQMQELG-----YAVNVHLFTTLIRVFAREGRVDAALS 256
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+ +M PD + +N ID K G + A + + EM G+ D+ TY ++
Sbjct: 257 LLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLC 316
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-A 264
+ +R+++ F M + P YN ++ G ++A S + +K +
Sbjct: 317 KADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVV 376
Query: 265 SYKFMMKALSDGGKLDEILE 284
SY ++ L G++DE L+
Sbjct: 377 SYNCILSCLGRKGQVDEALK 396
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 127/274 (46%), Gaps = 9/274 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y+ L+ G + G D F LF ++ GG + Y +L+ G + + A
Sbjct: 45 DVVSYTTLINGLCKLGRVDAAFDLFRKMVAA-GGCRPNAFTYNALVDGLCKQDRLDAARA 103
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
EA V N+++ AL G+ DEAL F +M E P L SFN
Sbjct: 104 VIAEA--RKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVP-----TLVSFN 156
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ G C R DA+EVF +M + P+ ++++ +ID LCK+ L EA++L M +
Sbjct: 157 AIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE 216
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G PD Y L+ R+D R+MV G P++ Y ++ KL +VG +D+A
Sbjct: 217 GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDA 276
Query: 249 KSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
F +++ K + +Y ++ ++DE
Sbjct: 277 HEIFRELVANKCSPNVVTYSALIGGYCRASRVDE 310
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 13/271 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+ F D V Y+ LM + G D F ++ E+ G V V + +++ G
Sbjct: 111 RDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEE--GYVPTLVSFNAIITGLCRARRL 168
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A+E +NE + + + V + V+D LC + + DEA +L DRM +E P +
Sbjct: 169 ADALEVFNEMIDRDFHPNL--VTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRP-----D 221
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L ++ + G+ GR A+ + R+M C PD +++ +ID+LCK G + +A E++
Sbjct: 222 LVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR 281
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ +P+ TY L+ +RVD+G R+M RPN+ YN ++ L V
Sbjct: 282 ELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVD 338
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKAL 273
+EA F M + + DA +Y+ + +AL
Sbjct: 339 RNEEAYGMFREMSECGFVPDARTYRGLKRAL 369
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 22/266 (8%)
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD-RMKNEHNPPKRL 120
M+ E M+C + + +L LC G+ +AL+ FD ++ H P
Sbjct: 1 MDVEGMQCNDRT-------------TSIILQGLCRCGRVAQALEHFDASLELAHAQP--- 44
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ S+ + +G C GR A ++FRKM C P+ ++N L+D LCK L A
Sbjct: 45 --DVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAAR 102
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ E + PD TY LM A F++ RVD+ F +M + G P L +N ++ L
Sbjct: 103 AVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGL 162
Query: 240 VQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ L +A F+ M+ + + +Y ++ L +LDE +++ ++ +G
Sbjct: 163 CRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDL 222
Query: 299 EELQEFVKGELSKEGREEEVVKLMEK 324
V G S GR + + L+ +
Sbjct: 223 VAYTPLVLG-FSAAGRLDSALGLLRR 247
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 8/208 (3%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEY-RCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ +++ G C GR A+E F E PD +S+ LI+ LCK G + A +L+ +
Sbjct: 12 TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 71
Query: 185 M-SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + G P+ +TY L+D + +R+D + P++ YN L+ L Q+G
Sbjct: 72 MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLG 131
Query: 244 MLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+DEA + F M ++ + S+ ++ L +L + LE+ ++D +F L
Sbjct: 132 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDR---DFHPNLV 188
Query: 303 EF--VKGELSKEGREEEVVKLMEKKERE 328
+ V L K + +E +L+++ E
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSE 216
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 53/200 (26%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+LGF G D L + + G + D V Y
Sbjct: 213 MVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ--GCIPDVVTY---------- 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
V+D LC G+ D+A ++F + P
Sbjct: 261 ---------------------------TVVIDKLCKVGRVDDAHEIFRELVANKCSP--- 290
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +++ + GYC R + +V R+M C P+ +++N +I L M+ EE
Sbjct: 291 --NVVTYSALIGGYCRASRVDEGGKVMREMA---CRPNVVTYNTMIWGL---SMVDRNEE 342
Query: 181 LYG---EMSDKGVNPDEYTY 197
YG EMS+ G PD TY
Sbjct: 343 AYGMFREMSECGFVPDARTY 362
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 132/275 (48%), Gaps = 13/275 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGM 62
KGF D Y L+ GF +DGD D +F K+ LG G+ +VY +L+KG +G+
Sbjct: 429 KGFKPDEFTYCSLVNGFCQDGDPDQAMAVF---KDGLGKGLRPSIIVYNTLIKGLCQQGL 485
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
A++ NE K N +++ LC G +A L + P
Sbjct: 486 ILPALQLMNEMA--EKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIP----- 538
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ ++N + DGYC Q + AIE+ +M +PD +++N L++ LCK E E++
Sbjct: 539 DIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIF 598
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M++KG P+ TY ++++ +V++ +M GL P++ + L+ +V
Sbjct: 599 KAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKV 658
Query: 243 GMLDEAKSFFDIMVKK--LKMDDASYKFMMKALSD 275
G LD A F M K+ + A+Y ++ A S+
Sbjct: 659 GDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSE 693
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 135/296 (45%), Gaps = 10/296 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V G ++ V Y ++ GF GD+D LF+E+ E + D + L+ K
Sbjct: 251 MPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLE--CCLCPDVTTFNKLVHALCKK 308
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+ +++ + V + N + LC G D A++L + E P
Sbjct: 309 GFVLESERLFDKVL--KRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRP--- 363
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N + G C + R +A E KM P+ ++N++ID CK GM+ +A
Sbjct: 364 --DVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANR 421
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ + KG PDE+TY L++ + D F+ + GLRP++ VYN L+ L
Sbjct: 422 ILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLC 481
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
Q G++ A + M +K K D +Y ++ L G L + ++G + G I
Sbjct: 482 QQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCI 537
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 136/288 (47%), Gaps = 18/288 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFE--ELKEKL--GGVVSDGVVYGSLMKGYFMK 60
G D V Y+ ++ G R R+ E E K+ GG + Y S++ GY K
Sbjct: 360 GLRPDVVTYNTVICGLCRKS------RVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKK 413
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM +A +AV + K S+++ C +G D+A+ +F + K L
Sbjct: 414 GMVVDANRILKDAVFK--GFKPDEFTYCSLVNGFCQDGDPDQAMAVF-----KDGLGKGL 466
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +N + G C QG A+++ +M E C PD ++N +I+ LCK G L++A
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANH 526
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L G+ KG PD +TY L+D ++D +M G+ P++ YN L+ L
Sbjct: 527 LIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLC 586
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVG 287
+ +E F M +K + +Y ++++L + K++E ++++G
Sbjct: 587 KTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLG 634
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 122/257 (47%), Gaps = 10/257 (3%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
KG + D Y+ L+ G+ R D L + + G+ D + Y +L+ G
Sbjct: 533 TKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQ--GMTPDVITYNTLLNGLCKTAK 590
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EE ME + +A+ E + + N+++++LCN+ K +EA+ L MK+ K L
Sbjct: 591 SEEVMEIF-KAMTEKGCAP-NIITYNTIIESLCNSKKVNEAVDLLGEMKS-----KGLTP 643
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ SF + G+C G A +FR M +Y S T ++N +I + + A L
Sbjct: 644 DVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRL 703
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ EM G +PD YTY +L+D + V+ G + + ++ G P+L + R++ L
Sbjct: 704 FSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCV 763
Query: 242 VGMLDEAKSFFDIMVKK 258
+ EA +MV+K
Sbjct: 764 EHKVQEAVGIIHLMVQK 780
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 6/249 (2%)
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRF 140
K + S+L L +GKF+E L M++ + V + + Y +G+
Sbjct: 116 KHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRF----YGRKGKI 171
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
++A++ F +M + C P S+N +++ L + G +A ++Y M DK V D YTY +
Sbjct: 172 QEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIR 231
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KL 259
+ + R R M G N Y +V + G D A+ FD M++ L
Sbjct: 232 IKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCL 291
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
D ++ ++ AL G + E + +L G F++G L KEG + V
Sbjct: 292 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQG-LCKEGSLDRAV 350
Query: 320 KLMEKKERE 328
+L+ RE
Sbjct: 351 RLLGCVSRE 359
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 131/260 (50%), Gaps = 10/260 (3%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
KG D + ++ L+ G+ R D +L E+ E G+V++ + Y +L+ G+ G
Sbjct: 386 TKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE--AGLVANTITYTTLIHGFCQVGD 443
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEHNP 116
A + E + +S V + V N++LD LC+NGK +AL++F M+ + P
Sbjct: 444 LNAAQDLLQEMI--SSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRP 501
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
+ ++ ++N++ G +G+F +A E++ +M PDT++++++ID LCK L
Sbjct: 502 FNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 561
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EA +++ M K +PD T+ L+ + VDDG F +M G+ + Y L+
Sbjct: 562 EATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLI 621
Query: 237 GKLVQVGMLDEAKSFFDIMV 256
+V +D A F M+
Sbjct: 622 YGFRKVDNIDGALDIFQEMI 641
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 146/302 (48%), Gaps = 15/302 (4%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V + + V+Y+ ++ G +DG LF E++EK + D V Y ++ G+ + G
Sbjct: 246 VSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEK--EIFPDIVTYNCMINGFCISGR 303
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A + E + + V +++++A GKF EA +L+D M P+ +
Sbjct: 304 WSDAEQLLQEML--ERKINPDVVTFSALINAFVKEGKFFEAEELYDEML-----PRSIIP 356
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ +++ M DG+C Q R A +F CSPD ++FN LI C+ + + +L
Sbjct: 357 STVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLL 416
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM++ G+ + TY L+ +V ++ ++M+ SG+ PN+ N L+ L
Sbjct: 417 HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDN 476
Query: 243 GMLDEAKSFFDIMVKKLKMD-DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G L +A F M +K KMD DAS F + + IL + G++++G +EEL
Sbjct: 477 GKLKDALEMFKAM-QKSKMDIDASRPF--NGVEPDVQTYNIL--ICGLINEGKFLEAEEL 531
Query: 302 QE 303
E
Sbjct: 532 YE 533
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 139/311 (44%), Gaps = 44/311 (14%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ LM G R+G L + + E G+ + + YG+++ G G A+
Sbjct: 183 VTFTTLMNGLCREGRVVEAVALLDRMLED--GLQPNQITYGTIVDGMCKMGDTVSALNLL 240
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + E S + + V N+++D L +G+ +A LF M+ K + ++ ++N M
Sbjct: 241 RK-MEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQE-----KEIFPDIVTYNCM 294
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM----- 185
+G+C GR+ DA ++ ++M E + +PD ++F+ LI+ K G EAEELY EM
Sbjct: 295 INGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSI 354
Query: 186 ------------------------------SDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
KG +PD T+ L+ RVDDG
Sbjct: 355 IPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIK 414
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
+M ++GL N Y L+ QVG L+ A+ M+ + + + ++ L
Sbjct: 415 LLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLC 474
Query: 275 DGGKLDEILEI 285
D GKL + LE+
Sbjct: 475 DNGKLKDALEM 485
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 110/230 (47%), Gaps = 15/230 (6%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+A + ++ C+ K AL F ++ P + +FN + G C + R +
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHP-----TVVTFNTLLHGLCVEDRISE 169
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+++F +M C P+ ++F L++ LC+ G + EA L M + G+ P++ TYG ++D
Sbjct: 170 ALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 225
Query: 203 ACFEVNRVDDGATYFRKMVD-SGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLK 260
++ RKM + S + PN+ +YN ++ L + G +A + F ++ K++
Sbjct: 226 GMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIF 285
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGIL----DDGGIEFSEELQEFVK 306
D +Y M+ G+ + +++ +L + + FS + FVK
Sbjct: 286 PDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVK 335
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DAI++F M R P + F L+ + + G L+ +M + + Y++ +LM
Sbjct: 64 DAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILM 123
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
+++ + F K+ G P + +N L+ L + EA F M K
Sbjct: 124 KCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKP--- 180
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ ++ +M L G++ E + ++ +L+DG
Sbjct: 181 NVVTFTTLMNGLCREGRVVEAVALLDRMLEDG 212
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 139/276 (50%), Gaps = 10/276 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y L+ G R G D ++L+E++ + + + VVY SL++ +F G +E+ +
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLD--ANQIPNAVVYTSLIRNFFKCGRKEDGHK 535
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
YNE + S + + N+ +D + G+ ++ LF +KN P + S+
Sbjct: 536 IYNEMLRLGCSPDLLLL--NTYMDCVFKAGEIEKGRALFQEIKNLGFIP-----DARSYT 588
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
++ G G +A E+F M E C DT ++N +ID CK+G + +A +L EM K
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G P TYG ++D +++R+D+ F + G+ N+ +Y+ L+ +VG +DEA
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708
Query: 249 KSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEIL 283
++M K L + ++ ++ AL ++ E L
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEAL 744
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 149/322 (46%), Gaps = 24/322 (7%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P Y+Y +++G+ G + + L E + K G + V Y ++ KG +EA+
Sbjct: 338 PCAYAYNTMIMGYGMAGKFEDAYSLLERQRRK--GCIPSVVSYNCILSCLGRKGQVDEAL 395
Query: 68 ECYNEAVGENSSVKMSAVAN----NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ + E +K A+ N N ++D LC GK + AL + D MK+ P N
Sbjct: 396 KKFEE-------MKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFP-----N 443
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + N+M D C R DA +F + C PD +++ +LI+ L ++G + EA +LY
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M D P+ Y L+ F+ R +DG + +M+ G P+L + N + + + G
Sbjct: 504 QMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAG 563
Query: 244 MLDEAKSFFDIMVKKLKM--DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+++ ++ F +K L D SY ++ L G E E+ + + G + +
Sbjct: 564 EIEKGRALFQ-EIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAY 622
Query: 302 QEFVKGELSKEGREEEVVKLME 323
+ G K G+ + +L+E
Sbjct: 623 NTVIDG-FCKSGKVNKAYQLLE 643
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 135/275 (49%), Gaps = 10/275 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF+ D Y+ L+ G V+ G + + LF +KE+ G V D Y +++ G+ G
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ--GCVLDTRAYNTVIDGFCKSGKVN 636
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + E + + + V SV+D L + DEA LF+ K+ K + +N+
Sbjct: 637 KAYQLLEEM--KTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS-----KGIELNV 689
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG+ GR +A + ++ + +P+ ++N L+D L K ++EA +
Sbjct: 690 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQS 749
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M D P+ TY +L+ ++ + + ++++M G +PN+ Y ++ L + G
Sbjct: 750 MKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGN 809
Query: 245 LDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGK 278
+ EA + F+ +K + D A Y +++ LS+ +
Sbjct: 810 IVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANR 844
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 149/314 (47%), Gaps = 12/314 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ + +++ L+ F R+G D L +E+K + D V+Y + + G +
Sbjct: 230 GYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKS--NSLEPDVVLYNVCIDCFGKAGKVD 287
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + ++E + + + + V S++ LC + +EA++LF+ M P A
Sbjct: 288 MAWKXFHEM--KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYA--- 342
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+N M GY G+F+DA + + C P +S+N ++ L + G + EA + + E
Sbjct: 343 --YNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + P+ TY +++D + +++ M D+GL PN+ N +V +L +
Sbjct: 401 MKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQR 459
Query: 245 LDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
LD+A S F+ + K + D +Y +++ L G++DE ++ +LD I +
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519
Query: 304 FVKGELSKEGREEE 317
++ K GR+E+
Sbjct: 520 LIRN-FFKCGRKED 532
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 12/258 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDS-DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
M G V D V Y+ M+G + D + LFE + + V Y +++ GY M
Sbjct: 296 MKANGLVLDDVTYTS-MIGVLCKADRLNEAVELFEHMDQ--NKQVPCAYAYNTMIMGYGM 352
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G E+A S V+ N +L L G+ DEALK F+ MK + P
Sbjct: 353 AGKFEDAYSLLERQ--RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP--- 407
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
NL ++N+M D C G+ + A+ V M + P+ ++ N ++D+LCK L +A
Sbjct: 408 ---NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC 464
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
++ + K PD TY L++ RVD+ + +M+D+ PN VY L+
Sbjct: 465 SIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF 524
Query: 240 VQVGMLDEAKSFFDIMVK 257
+ G ++ ++ M++
Sbjct: 525 FKCGRKEDGHKIYNEMLR 542
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 119/250 (47%), Gaps = 9/250 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D Y+ ++ GF + G + ++L EE+K K G V YGS++ G
Sbjct: 613 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK--GHEPTVVTYGSVIDGLAKIDRL 670
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + EA ++ ++++ V +S++D G+ DEA + + + K L N
Sbjct: 671 DEAYMLFEEA--KSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ-----KGLTPN 723
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + D +A+ F+ M + +C+P+ ++++ LI LCK +A +
Sbjct: 724 VYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQ 783
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +G P+ +TY ++ + + + T F K + G + A+YN ++ L
Sbjct: 784 EMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNAN 843
Query: 244 MLDEAKSFFD 253
+A F+
Sbjct: 844 RASDAYRLFE 853
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 9/217 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V Y ++ G + D + LFEE K K G+ + V+Y SL+ G+
Sbjct: 645 MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK--GIELNVVIYSSLIDGFGKV 702
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA E + + + N +LDAL + EAL F MK+ P
Sbjct: 703 GRIDEAYLIMEELM--QKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTP--- 757
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +++++ G C +F A +++M + P+ ++ +I L K G + EA+
Sbjct: 758 --NYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADT 815
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
L+ + +KG D Y +++ NR D F
Sbjct: 816 LFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLF 852
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 6/200 (3%)
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
A +++ AL + D L LF +M+ AVN+ F + + +GR A+
Sbjct: 202 AYTNLIGALSTSRDSDCMLTLFQQMQELG-----YAVNVHLFTTLIRVFAREGRVDAALS 256
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+ +M PD + +N ID K G + A + + EM G+ D+ TY ++
Sbjct: 257 LLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLC 316
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-A 264
+ +R+++ F M + P YN ++ G ++A S + +K +
Sbjct: 317 KADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVV 376
Query: 265 SYKFMMKALSDGGKLDEILE 284
SY ++ L G++DE L+
Sbjct: 377 SYNCILSCLGRKGQVDEALK 396
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 147/295 (49%), Gaps = 13/295 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V + V Y+ ++ G+V GD G R+F EL + G + D Y LM GY +G
Sbjct: 222 GIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDH--GWLPDATTYTILMDGYVKQGRFT 279
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKRLAVN 123
+A++ +E E + V+ + + ++ C K EAL L D ++ ++ P L
Sbjct: 280 DAVKVMDEM--EENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCK 337
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ D CG+GR K+A +++ K+ + C+PD + LI LCK G + EA +L+
Sbjct: 338 ------VIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFN 391
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E ++G TY L+ E+ + + A + M++ G PN YN L+ ++VG
Sbjct: 392 EF-ERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVG 450
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
E + M+ K +++++Y +++ L GK +E+L I+ I+ G ++F
Sbjct: 451 KAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISSGAVDF 505
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 141/285 (49%), Gaps = 11/285 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+F G++ D Y+ LM G+V+ G ++ +E++E GV + + YG ++ GY +
Sbjct: 253 LFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEE--NGVEPNDITYGVIILGYCKE 310
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA+ N+ + E + SA+ V+D LC G+ EA K+++++ ++ P
Sbjct: 311 RKSGEALNLLNDML-EKKYIPNSALCC-KVIDVLCGEGRVKEACKMWEKLLKKNCTPDNA 368
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ + C +G +A ++F + S L++N LI +C+ G L EA
Sbjct: 369 ITS-----TLIHWLCKEGNIWEARKLFNEFERGTIS-SLLTYNTLIAGMCEMGELCEAAR 422
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ +M +KG P+E+TY +L+ +V + + +M+D G N + Y LV L+
Sbjct: 423 LWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLL 482
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYK-FMMKALSDGGKLDEILE 284
++G +E + +++ +D ++ F+ +S+ + ILE
Sbjct: 483 KLGKREELLNILSMIISSGAVDFKAWNLFVPHFVSNVNEQANILE 527
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 150/320 (46%), Gaps = 14/320 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V + + L+ + D +G ++F+E+ G+V + V Y +++ GY +G
Sbjct: 187 GVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSM--GIVPNVVTYTTILGGYVSRGDMI 244
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + E + A ++D G+F +A+K+ D M+ P +
Sbjct: 245 GAKRVFGELF--DHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDI---- 298
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ V+ GYC + + +A+ + M E + P++ +ID LC G + EA +++ +
Sbjct: 299 -TYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEK 357
Query: 185 MSDKGVNPDE-YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ K PD T L+ C E N + + F + + G +L YN L+ + ++G
Sbjct: 358 LLKKNCTPDNAITSTLIHWLCKEGN-IWEARKLFNEF-ERGTISSLLTYNTLIAGMCEMG 415
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L EA +D M++K ++ +Y ++K GK E++++V +LD G +
Sbjct: 416 ELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYL 475
Query: 303 EFVKGELSKEGREEEVVKLM 322
V+G L K G+ EE++ ++
Sbjct: 476 ILVEG-LLKLGKREELLNIL 494
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 137/308 (44%), Gaps = 9/308 (2%)
Query: 16 LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVG 75
L+ V++ V LF+ K K G VV + L+K K E A + ++E
Sbjct: 162 LLNALVQNNRFSSVHLLFKYSKSKFG-VVPNVFTCNILIKALCKKNDVEGARKVFDEM-- 218
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
+ + + V ++L + G A ++F + + P + ++ ++ DGY
Sbjct: 219 PSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLP-----DATTYTILMDGYV 273
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
QGRF DA++V +M E P+ +++ +I CK EA L +M +K P+
Sbjct: 274 KQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSA 333
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
++D RV + + K++ P+ A+ + L+ L + G + EA+ F+
Sbjct: 334 LCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEF 393
Query: 256 VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
+ +Y ++ + + G+L E + +L+ G + +KG L K G+
Sbjct: 394 ERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFL-KVGKA 452
Query: 316 EEVVKLME 323
+EV+K++E
Sbjct: 453 KEVIKVVE 460
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 135/275 (49%), Gaps = 21/275 (7%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY+Y +++G+ G + + L E K K G + + Y ++ KG EEA+
Sbjct: 340 PCVYAYNTMIMGYGSVGKFNEAYSLLERQKRK--GCIPSVIAYNCILTCLGRKGKVEEAL 397
Query: 68 ECYNEAVGENSSVKMSAVAN----NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++KM A N N ++D LC G+ + ALK+ D MK P N
Sbjct: 398 RIL-------EAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFP-----N 445
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + N+M D C R +A +F + C+PD+++F +LID L ++G + +A LY
Sbjct: 446 IITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYE 505
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M D G P+ Y L+ F+ R +DG +++M+ G P+L + N + + + G
Sbjct: 506 KMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAG 565
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGG 277
+++ ++ F +I + L D SY ++ L GG
Sbjct: 566 EIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGG 600
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 142/281 (50%), Gaps = 10/281 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K D V + L+ G R G + + L+E++ + G + VVY SL++ +F G +
Sbjct: 475 KVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLD--SGQTPNAVVYTSLIRNFFKCGRK 532
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+ + Y E + S + + N+ +D + G+ ++ LF+ +K + P +
Sbjct: 533 EDGHKIYKEMMHRGCSPDLMLL--NNYMDCVFKAGEIEKGRALFEEIKAQGLTP-----D 585
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S++++ G G KD ++F +M E DT ++N +ID CK+G + +A +L
Sbjct: 586 VRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLE 645
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KG+ P TYG ++D +++R+D+ F + + N+ VY+ L+ +VG
Sbjct: 646 EMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVG 705
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEIL 283
+DEA ++M K L + ++ ++ AL ++DE L
Sbjct: 706 RIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEAL 746
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 137/276 (49%), Gaps = 10/276 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D YS L+ G V+ G S ++LF E+KE+ G+ D Y ++ G+ G
Sbjct: 580 QGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQ--GLHLDTRAYNIVIDGFCKSGKV 637
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + E + ++ + V SV+D L + DEA LF+ K+ K + +N
Sbjct: 638 NKAYQLLEEM--KTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS-----KAVDLN 690
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + DG+ GR +A + ++ + +P+T ++N L+D L K + EA +
Sbjct: 691 VVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQ 750
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + P+E TY ++++ +V + + ++++M GL+PN Y ++ L +VG
Sbjct: 751 NMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVG 810
Query: 244 MLDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGK 278
+ EAK F+ + D A Y M++ LS+ K
Sbjct: 811 NVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANK 846
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 45/289 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME- 63
F AD V+Y+ + F + G D ++ F ELK + G+V D V + S++ G K
Sbjct: 267 SFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQ--GLVPDDVTFTSMI-GVLCKAERV 323
Query: 64 EEAMECYNEAVGENSSVKM----------------------------------SAVANNS 89
+EA+E + E + N SV S +A N
Sbjct: 324 DEAVELFEE-LDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNC 382
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+L L GK +EAL++ + MK + P NL S+N++ D C G + A++V
Sbjct: 383 ILTCLGRKGKVEEALRILEAMKMDAAP------NLTSYNILIDMLCKAGELEAALKVQDS 436
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M E P+ ++ N +ID+LCK L EA ++ + K PD T+ L+D +
Sbjct: 437 MKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGK 496
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
V+D + KM+DSG PN VY L+ + G ++ + M+ +
Sbjct: 497 VNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHR 545
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 11/288 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D Y+ ++ GF + G + ++L EE+K K G+ V YGS++ G
Sbjct: 615 QGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTK--GLQPTVVTYGSVIDGLAKIDRL 672
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + EA ++ +V ++ V +S++D G+ DEA + + + K L N
Sbjct: 673 DEAYMLFEEA--KSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQ-----KGLTPN 725
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + D +A+ F+ M +C P+ ++++ +++ LCK +A +
Sbjct: 726 TYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQ 785
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +G+ P+ TY ++ V V + F + SG P+ A YN ++ L
Sbjct: 786 EMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNAN 845
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
+A F + +K ++ + ++ AL L++ IVG +L
Sbjct: 846 KAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQA-AIVGAVL 892
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMK-NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
+++ G+ D AL L D MK N N +L +NV D + G+ A +
Sbjct: 241 TTLICVFAREGRVDAALSLLDEMKSNSFN------ADLVLYNVCIDCFGKVGKVDMAWKF 294
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F ++ PD ++F ++I LCK + EA EL+ E+ P Y Y ++
Sbjct: 295 FHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGS 354
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-- 264
V + ++ + + G P++ YN ++ L + G ++EA + M KMD A
Sbjct: 355 VGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM----KMDAAPN 410
Query: 265 --SYKFMMKALSDGGKLDEILEI 285
SY ++ L G+L+ L++
Sbjct: 411 LTSYNILIDMLCKAGELEAALKV 433
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
V + F + + +GR A+ + +M + D + +N ID K G + A +
Sbjct: 235 VTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKF 294
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ E+ +G+ PD+ T+ ++ + RVD+ F ++ + P + YN ++
Sbjct: 295 FHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGS 354
Query: 242 VGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIV 286
VG +EA S + +K + +Y ++ L GK++E L I+
Sbjct: 355 VGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIL 400
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 123/327 (37%), Gaps = 24/327 (7%)
Query: 70 YNEAVGENSSVKMSAVANNSVLD---ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
Y E + E S+ +NN+ ++ + + K EA + + M+ P +
Sbjct: 150 YLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPA-----YSA 204
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+ + + + R+M E F LI + G + A L EM
Sbjct: 205 YTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMK 264
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
N D Y + +D +V +VD +F ++ GL P+ + ++G L + +D
Sbjct: 265 SNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVD 324
Query: 247 EAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
EA F+ + + +Y M+ GK +E ++ G I S +
Sbjct: 325 EAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIP-SVIAYNCI 383
Query: 306 KGELSKEGREEEVVKLMEKKEREKAE------------AKAREAEAAEAAKRSARAAIAS 353
L ++G+ EE ++++E + + A KA E EAA + S + A
Sbjct: 384 LTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKE--AG 441
Query: 354 LIPSKFGDKVGGTEMADNANANEAASV 380
L P+ + + +EA S+
Sbjct: 442 LFPNIITVNIMIDRLCKAQRLDEACSI 468
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 118 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 175
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 176 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDDANELFDEM-----LVKGLVPNG 228
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A L E
Sbjct: 229 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 288
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS K + PD+ TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 289 MSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGR 348
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 349 SVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKG 382
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 115/236 (48%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V +GV + +L+ G+
Sbjct: 184 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLVPNGVTFTTLIDGHCKN 241
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKI 299
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 300 -----TYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEK 354
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM + G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 355 MLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 410
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 2/193 (1%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+L F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 52 DLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 111
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
E+ + G Y + +LM + + + F + GLRP++ YN L+ +++
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 171
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G LDE M+ ++ D +Y ++ L K+D+ E+ +L G +
Sbjct: 172 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 231
Query: 302 QEFVKGELSKEGR 314
+ G K GR
Sbjct: 232 TTLIDGH-CKNGR 243
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 154/342 (45%), Gaps = 23/342 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + + YS L+ GF G F L E+ L + + Y LM +G
Sbjct: 179 RGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI--LKNINPNVYTYTILMDALCKEGKV 236
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA AV VK + V+ N+++D C G+ A ++F M + P N
Sbjct: 237 KEAKNLL--AVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNP-----N 289
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S+N+M D C R +A+ + R++ P+T+++++LID CK G + A +L
Sbjct: 290 VYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLK 349
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +G D TY L+DA + +D F KM + G++PN Y L+ L + G
Sbjct: 350 EMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGG 409
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
A+ F ++VK +++ +Y M+ L G LDE L + + ++G I + +
Sbjct: 410 RHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFE 469
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAK 344
++ L EK + +KAE E A + +
Sbjct: 470 IIIRS-------------LFEKDQNDKAEKLLHEMIAKDLLR 498
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 151/324 (46%), Gaps = 11/324 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG D + L+ F G F + ++ + G + + +LMKG +K
Sbjct: 36 MQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKL--GYQPNTITLNTLMKGLCLK 93
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++++ +++ V + +M V+ ++L+ LC G+ ALKL +++ P
Sbjct: 94 GEVKKSLHFHDKVVAQ--GFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRP--- 148
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +N + DG C +A +++ +M P+ ++++ LI C G L EA
Sbjct: 149 --NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFG 206
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM K +NP+ YTY +LMDA + +V + M G++PN+ YN L+
Sbjct: 207 LLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYC 266
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+G + AK F MV+K + + SY M+ L ++DE + ++ +L + +
Sbjct: 267 LIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTV 326
Query: 300 ELQEFVKGELSKEGREEEVVKLME 323
+ G K GR + L++
Sbjct: 327 TYSSLIDG-FCKLGRITSALDLLK 349
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
R +P + FN ++ L K A L+ +M KG+ PD +T +L++ + ++
Sbjct: 5 RDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFS 64
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKA 272
T K++ G +PN N L+ L G + ++ F D ++ + +MD SY ++
Sbjct: 65 FTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNG 124
Query: 273 LSDGGKLDEILEIVGGILD 291
L G+ L+++ I D
Sbjct: 125 LCKIGETRSALKLLRMIED 143
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 47/117 (40%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
FN + + AI +F++M PD + N LI+ C G + + + G++
Sbjct: 13 FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
G P+ T LM V + K+V G + + Y L+ L ++G
Sbjct: 73 KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129
>gi|255661018|gb|ACU25678.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 376
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 139/282 (49%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G + V ++E +K+ G V D + YG L+ G G +++ +
Sbjct: 62 FNIMMRGLFDNGKVNEVISIWELMKKS--GFVEDSITYGILVHGLCKNGDINKSL--HML 117
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ E + A A +++++ LC + K D+A+ + + M P N +N + +
Sbjct: 118 EIAEVKGGVLDAFAYSAMINWLCKDSKLDKAVSVLNGMIKXGCMP-----NAHVYNALIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI VF++MG CSP +++N LI+ LCK EA +L EM +KG NP
Sbjct: 173 GLVGASKFEDAIRVFQEMGNTHCSPTIITYNTLINGLCKAERFGEAYDLVKEMLEKGWNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY LL+ +V+ + ++++ G +P++ ++N L+ L VG A S +
Sbjct: 233 CVITYSLLIKGLCLGRKVEMALHLWNQVINKGFKPDVQMHNILIHGLCSVGKTQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD+ + ++ +M+ G + L IL +G
Sbjct: 293 FDMNRWNCAPNLVTHNTLMZGFYKDGDIRNALATWARILRNG 334
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 127/280 (45%), Gaps = 18/280 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + Y L+ G ++GD + + E+ E GGV+ D Y +++ +
Sbjct: 89 GFVEDSITYGILVHGLCKNGDINKSLHML-EIAEVKGGVL-DAFAYSAMINWLCKDSKLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNN----GKFDEALKLFDRMKNEHNPPKRL 120
+A+ N +K + N V +AL N KF++A+++F M N H P +
Sbjct: 147 KAVSVL------NGMIKXGCMPNAHVYNALINGLVGASKFEDAIRVFQEMGNTHCSPTII 200
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + +G C RF +A ++ ++M E +P ++++ LI LC + A
Sbjct: 201 -----TYNTLINGLCKAERFGEAYDLVKEMLEKGWNPCVITYSLLIKGLCLGRKVEMALH 255
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ ++ +KG PD + +L+ V + + + M PNL +N L+
Sbjct: 256 LWNQVINKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRWNCAPNLVTHNTLMZGFY 315
Query: 241 QVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKL 279
+ G + A ++ I+ ++ D SY +K L ++
Sbjct: 316 KDGDIRNALATWARILRNGVQPDIISYNITLKGLCSCNRI 355
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 127/280 (45%), Gaps = 14/280 (5%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD D +++E+ E V D VVY +++ G+F G ++ E + E +G+ ++
Sbjct: 4 GDIDAAKMVYKEIVES--EVSPDAVVYNAMLNGFFKVGRIKDCFELW-ELMGKEGGRNVA 60
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ N ++ L +NGK +E + +++ MK + ++ ++ G C G +
Sbjct: 61 SF--NIMMRGLFDNGKVNEVISIWELMKKSGFVEDSI-----TYGILVHGLCKNGDINKS 113
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ + D +++ +I+ LCK+ L +A + M G P+ + Y L++
Sbjct: 114 LHMLEIAEVKGGVLDAFAYSAMINWLCKDSKLDKAVSVLNGMIKXGCMPNAHVYNALING 173
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
++ +D F++M ++ P + YN L+ L + EA M++K
Sbjct: 174 LVGASKFEDAIRVFQEMGNTHCSPTIITYNTLINGLCKAERFGEAYDLVKEMLEKGWNPC 233
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+Y ++K L G K++ L + +++ G F ++Q
Sbjct: 234 VITYSLLIKGLCLGRKVEMALHLWNQVINKG---FKPDVQ 270
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 103/257 (40%), Gaps = 34/257 (13%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
VKG V D YS ++ +D D + + + G + + VY +L+ G
Sbjct: 122 VKGGVLDAFAYSAMINWLCKDSKLDKAVSVLNGMIKX--GCMPNAHVYNALINGLVGASK 179
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE-HNP----- 116
E+A+ + E N+ + + N++++ LC +F EA L M + NP
Sbjct: 180 FEDAIRVFQEM--GNTHCSPTIITYNTLINGLCKAERFGEAYDLVKEMLEKGWNPCVITY 237
Query: 117 -----------PKRLAVNLGS-------------FNVMADGYCGQGRFKDAIEVFRKMGE 152
+A++L + N++ G C G+ + A+ ++ M
Sbjct: 238 SLLIKGLCLGRKVEMALHLWNQVINKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNR 297
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
+ C+P+ ++ N L++ K+G + A + + GV PD +Y + + NR+
Sbjct: 298 WNCAPNLVTHNTLMZGFYKDGDIRNALATWARILRNGVQPDIISYNITLKGLCSCNRISG 357
Query: 213 GATYFRKMVDSGLRPNL 229
+ + + P +
Sbjct: 358 AILFLHDALTKKIFPTI 374
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + A+ +Y E+ + V+PD Y +++ F+V R+ D + M G R N+
Sbjct: 1 CESGDIDAAKMVYKEIVESEVSPDAVVYNAMLNGFFKVGRIKDCFELWELMGKEGGR-NV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLD------EI 282
A +N ++ L G ++E S +++M K ++D+ +Y ++ L G ++ EI
Sbjct: 60 ASFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGLCKNGDINKSLHMLEI 119
Query: 283 LEIVGGILD 291
E+ GG+LD
Sbjct: 120 AEVKGGVLD 128
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E SPD + +N +++ K G + + EL+ M +G +
Sbjct: 1 CESGDIDAAKMVYKEIVESEVSPDAVVYNAMLNGFFKVGRIKDCFELWELMGKEG-GRNV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +V++ + + M SG + Y LV L + G ++++ +I
Sbjct: 60 ASFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGLCKNGDINKSLHMLEI 119
Query: 255 M-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
VK +D +Y M+ L KLD+ + ++ G++ G + + + G +
Sbjct: 120 AEVKGGVLDAFAYSAMINWLCKDSKLDKAVSVLNGMIKXGCMPNAHVYNALINGLVGASK 179
Query: 314 REEEV 318
E+ +
Sbjct: 180 FEDAI 184
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +VG + + +++M K+ + AS+ M
Sbjct: 6 IDAAKMVYKEIVESEVSPDAVVYNAMLNGFFKVGRIKDCFELWELMGKEGGRNVASFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
M+ L D GK++E++ I + G +E S V G L K G + + ++E E
Sbjct: 66 MRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHG-LCKNGDINKSLHMLEIAE 121
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 160/336 (47%), Gaps = 32/336 (9%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG + +Y+ L+ G + GD +LF+ + EK G+ D V Y +++ GY
Sbjct: 386 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK--GLEPDSVTYSTMIDGYCKS 443
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA ++E + V+ + N+++ C G ++A+ LF M K
Sbjct: 444 ENVAEAFSLFHEM--PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ-----KGF 496
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A L SFN + DGYC + ++A ++F++M + PD +++ +ID CK G + EA
Sbjct: 497 ATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 555
Query: 181 LYGEMSD-----------------KGVNPDEYTYGLLMDA-CFEVNRVDDGATYFR-KMV 221
L+ EM + KGV PDE TYGL++ A C E N V+ A R ++V
Sbjct: 556 LFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVE--AFKLRDEVV 613
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLD 280
G+ +++ L+ L + L EA D M + LK A+ ++++ + GK+D
Sbjct: 614 GKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMD 673
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
E + G+ G + + L + V G L+ E+
Sbjct: 674 EATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSED 709
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 138/280 (49%), Gaps = 13/280 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V + +LG+ + G + F+E+ + G++ + +Y L+ G+F G
Sbjct: 249 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDH--GLMPNNPLYTVLINGHFKAGNL 306
Query: 64 EEAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
EA+ + A+G V+ + + + L NG+ EALK+F +K K L
Sbjct: 307 MEALSIFRHLHALGVLPDVQTCS----AFIHGLLKNGRVQEALKVFSELKE-----KGLV 357
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ +++ + G+C QG + A E+ +M +P+ +N L+D LCK+G + A +L
Sbjct: 358 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 417
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ M +KG+ PD TY ++D + V + + F +M G++P+ VYN LV +
Sbjct: 418 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 477
Query: 242 VGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
G +++A + F M++K S+ ++ K+ E
Sbjct: 478 EGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQE 517
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 124/271 (45%), Gaps = 10/271 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VVYS L++G+ +G + RL + + GV D Y +++
Sbjct: 176 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM--SCSGVAPDIFCYNAIISCLSKA 233
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA E G +K AV + + GK EA K FD M + P
Sbjct: 234 GKMEEASTYLLEIQGR--GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP--- 288
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N + V+ +G+ G +A+ +FR + PD + + I L KNG + EA +
Sbjct: 289 --NNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 346
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ E+ +KG+ PD +TY L+ + V+ +M G+ PN+ +YN LV L
Sbjct: 347 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 406
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ G + A+ FD M +K L+ D +Y M+
Sbjct: 407 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMI 437
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 17/284 (5%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+V + Y + G EA + E + + +K A ++++D G D
Sbjct: 5 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM--QKTGLKPDYNACSALIDGFMREGDID 62
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
E L++ D M + P +NL ++NV+ G C G+ + A E+ + M C P++ +
Sbjct: 63 EVLRIKDVMVSCGIP-----INLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 117
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
F LI+ C+ + A EL EM + + P +YG +++ + KM
Sbjct: 118 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 177
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLD 280
SGL+PN+ VY+ L+ G ++EA+ D M + D Y ++ LS GK++
Sbjct: 178 FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 237
Query: 281 E----ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
E +LEI G L + F F+ G SK G+ E K
Sbjct: 238 EASTYLLEIQGRGLKPDAVTFG----AFILG-YSKTGKMTEAAK 276
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 149/351 (42%), Gaps = 42/351 (11%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRL----------------------------FEEL 36
G D S L+ GF+R+GD D V R+ E+
Sbjct: 40 GLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKA 99
Query: 37 KEKLGGVVSDGV-----VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
E L G+++ G + L++GY + A+E +E E ++ SAV+ +++
Sbjct: 100 AEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM--EKRNLVPSAVSYGAMI 157
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ LC+ A KL ++M P N+ ++ + GY +GR ++A + M
Sbjct: 158 NGLCHCKDLSLANKLLEKMTFSGLKP-----NVVVYSTLIMGYASEGRIEEARRLLDGMS 212
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+PD +N +I L K G + EA E+ +G+ PD T+G + + ++
Sbjct: 213 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 272
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMM 270
+ A YF +M+D GL PN +Y L+ + G L EA S F + + D + +
Sbjct: 273 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 332
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
L G++ E L++ + + G + + G K+G E+ +L
Sbjct: 333 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG-FCKQGEVEKAFEL 382
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
MGE P+T ++ + LC+ + EA+ + EM G+ PD L+D
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
+D+ MV G+ NL YN L+ L + G +++A M+
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMI 107
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 14/213 (6%)
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
K L N ++ ++ G C R +A F +M + PD + + LID + G + E
Sbjct: 4 KGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE 63
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
+ M G+ + TY +L+ + +++ A + M+ G +PN + L+
Sbjct: 64 VLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIE 123
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM------KALSDGGKLDEILEIVGGIL 290
+ + A D M K+ L SY M+ K LS KL E + G L
Sbjct: 124 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG--L 181
Query: 291 DDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+ +S + + + EGR EE +L++
Sbjct: 182 KPNVVVYSTLIMGY-----ASEGRIEEARRLLD 209
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 141/296 (47%), Gaps = 16/296 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V Y L+ G V G+ D + +++ E+ GV+ D VY LM G KG
Sbjct: 409 KGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVER--GVLPDANVYNVLMNGLCKKGRL 466
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A E + +N S + A + +++D +GK DEA KLF E K +
Sbjct: 467 SAAKLLLVEMLHQNLS--LDAFVSATLVDGFIRHGKLDEAKKLF-----ELTIAKGMDPG 519
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +N M GYC G DA+ ++M + SPD +++ +ID K L A +L+G
Sbjct: 520 VVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFG 579
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M + P+ TY L++ F +M SGL+PN+ Y L+G + G
Sbjct: 580 QMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEG 639
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSD------GGKLDEILEIVGGILDD 292
+ +A SFF++M + + +D ++ +++ L++ K +E LEI ++ D
Sbjct: 640 KISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMD 695
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 141/314 (44%), Gaps = 26/314 (8%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK--LGGVVSDGVVYGSLMKGYFMKG 61
KG + + V Y+ L+ G+ + GD + LF+ELK K L + G++ L K K
Sbjct: 234 KGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKA 293
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
++ +E V N V NS++DA +G E K + P
Sbjct: 294 VDGLLVEMKERGVDVNVQVY------NSIVDAQIKHGCKIEVGKTLRWITENGCEP---- 343
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ ++N + G C G+ +A E+ + SP+ LS+ LI CK G A +L
Sbjct: 344 -DITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDL 402
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ M++KG D YG L+ VD T KMV+ G+ P+ VYN L+ L +
Sbjct: 403 FIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCK 462
Query: 242 VGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG----GKLDEI-----LEIVGGILDD 292
G L AK ++V+ L + + F+ L DG GKLDE L I G +D
Sbjct: 463 KGRLSAAKL---LLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKG-MDP 518
Query: 293 GGIEFSEELQEFVK 306
G + ++ ++ + K
Sbjct: 519 GVVGYNAMIKGYCK 532
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 127/346 (36%), Gaps = 93/346 (26%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D V + L+ GF+R G D +LFE K G+ V Y +++KGY
Sbjct: 476 MLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAK--GMDPGVVGYNAMIKGYCKF 533
Query: 61 GMEEEAMECYNEA-------------------VGEN--------------SSVKMSAVAN 87
GM +A+ C V +N K + V
Sbjct: 534 GMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTY 593
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
S+++ C G A K F+ M++ P N+ ++ ++ +C +G+ A F
Sbjct: 594 TSLINGFCRTGDSSRAEKTFEEMRSSGLKP-----NVVTYTILIGCFCKEGKISKACSFF 648
Query: 148 RKMGEYRCSPDTLSFNNLID---------------------------------------- 167
M RC P+ ++FN LI+
Sbjct: 649 ELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQR 708
Query: 168 ---------QLCKNGMLAEAEELYGEMSDKGVNPDEYTY-GLLMDACFEVNRVDDGATYF 217
LC + M+ A +L +M+ KG+ PD ++ L+ C E + T
Sbjct: 709 VAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTIS 768
Query: 218 RKMVDSGLRPNLAV-YNRLVGKLVQVGMLDEAKSFFDIMVKKLKMD 262
K+ + L+ +AV Y++ + + G+ EA F +++ +K+
Sbjct: 769 CKLNEWELQ--IAVKYSQKLNPFLPKGLTSEASKVFHTLLEGVKLH 812
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 11/234 (4%)
Query: 56 GYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
Y G+ A+E Y+ A ++ + +A N++L+AL K + A K+++ M
Sbjct: 143 AYVDSGLVNRALELYHIAYDIHNYLP-DVIACNALLNALIQQKKVEIARKVYEEMVKRDG 201
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
+V +M G C + + ++ ++ C P+ + +N L+D K G +
Sbjct: 202 CWDNYSVC-----IMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDV 256
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVN-RVDDGATYFRKMVDSGLRPNLAVYN 233
A L+ E+ KG P TYG++++ C + N + DG +M + G+ N+ VYN
Sbjct: 257 ERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDG--LLVEMKERGVDVNVQVYN 314
Query: 234 RLVGKLVQVGM-LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+V ++ G ++ K+ I + D +Y ++ GK+ E E++
Sbjct: 315 SIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELL 368
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 135/282 (47%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ G+ + G +F E+ ++ G+V D V + SL+
Sbjct: 107 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR--GLVPDVVTFTSLIHATCKA 164
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A+ + ++M+ V +++D C G D+AL + M+ P
Sbjct: 165 GNLEQAVALVAQM--RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP--- 219
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +N + +GYC GR A E+ R+M R PD ++++ +I CK G L A +
Sbjct: 220 --SVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 277
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M KGV PD TY L+ E R++D F M+ G++P+ Y L+
Sbjct: 278 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 337
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDE 281
+ G +++A S D M++K + D +Y ++ LS + E
Sbjct: 338 KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 379
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 140/320 (43%), Gaps = 45/320 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ L+ F R G+ DG R+ ++E+ G + V + S++ G
Sbjct: 40 GCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREE-GNAKPNLVTFNSMVNG-------- 90
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
LC G+ + A K+FD M E P ++
Sbjct: 91 -----------------------------LCKAGRMEGARKVFDEMVREGLAP-----DV 116
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S+N + GYC G +++ VF +M + PD ++F +LI CK G L +A L +
Sbjct: 117 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 176
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++G+ +E T+ L+D + +DD +M G++P++ YN L+ ++G
Sbjct: 177 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 236
Query: 245 LDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+D A+ M K++K D +Y ++ G LD ++ +L G + +
Sbjct: 237 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 296
Query: 304 FVKGELSKEGREEEVVKLME 323
++G L +E R + +L E
Sbjct: 297 LIRG-LCEEKRLNDACELFE 315
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 135/275 (49%), Gaps = 10/275 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D V ++ L+ + G+ + L +++E+ G+ + V + +L+ G+ K
Sbjct: 142 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER--GLRMNEVTFTALIDGFCKK 199
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ E ++ S V N++++ C G+ D A +L M+ KR+
Sbjct: 200 GFLDDALLAVEEM--RKCGIQPSVVCYNALINGYCKLGRMDLARELIREME-----AKRV 252
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + GYC G A ++ +KM + PD +++++LI LC+ L +A E
Sbjct: 253 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 312
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M GV PDE+TY L+D + V+ + +M+ G+ P++ Y+ L+ L
Sbjct: 313 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 372
Query: 241 QVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALS 274
+ EA + F + + D+ Y +M S
Sbjct: 373 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS 407
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 137/304 (45%), Gaps = 31/304 (10%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V YS ++ G+ + G+ D F+L +++ +K GV+ D + Y SL++G + +A E
Sbjct: 255 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKK--GVLPDAITYSSLIRGLCEEKRLNDACE 312
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + V+ +++D C G ++AL L D M + P ++ +++
Sbjct: 313 LFENML--QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP-----DVVTYS 365
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL---------------IDQLCKNG 173
V+ +G R K+A + K+ PD + ++ L + C G
Sbjct: 366 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 425
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
++ EA+++Y M D+ D Y +L+ V ++ ++M+ SG PN
Sbjct: 426 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 485
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSD----GGKLDEILEIVGGI 289
LV L + GM+ EA + ++ + DA KAL D G +D +++++ G+
Sbjct: 486 SLVRGLFEEGMVVEADNAIQDLLTCCPLADAEAS---KALIDLNRKEGNVDALIDVLCGM 542
Query: 290 LDDG 293
DG
Sbjct: 543 ARDG 546
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 2/180 (1%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M + +P+ ++N L+ LC G L EA + G+M G P+ TY L+ A
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 210 VDDGATYFRKMVDSG-LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
+D M + G +PNL +N +V L + G ++ A+ FD MV++ L D SY
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
++ G L E L + + G + + E+ V + + +ER
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 132/281 (46%), Gaps = 9/281 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GF D Y+ L G + G D FRL +E+ E+LG ++ D V Y +L F
Sbjct: 300 MTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEM-ERLGTLLPDVVTYNTLADACFKC 358
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A+ E VK + V +N V+ LC +G+ + AL ++M ++ L
Sbjct: 359 RCSSDALRLLEEM--REKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADD-----GL 411
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A ++ ++N + +C G A + +M DT + N ++ LCK EA+
Sbjct: 412 APDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQG 471
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +G PDE +YG +M A F+ + + +M++ L P+++ YN L+ L
Sbjct: 472 LLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLS 531
Query: 241 QVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLD 280
++G L EA ++M K L DD +Y ++ A G L+
Sbjct: 532 RMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLE 572
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 141/308 (45%), Gaps = 49/308 (15%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK-LGGVVSDGVVYGSLMKGYFMKGM 62
+GF+ D V Y +M + ++ +S+ RL++E+ EK L +S Y +L+KG G
Sbjct: 479 RGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIS---TYNTLIKGLSRMGR 535
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLA 121
+EA++ NE + E V N ++ A C G + A + ++M +N P
Sbjct: 536 LKEAIDKLNELM-EKGLVP-DDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKP----- 588
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ + N + +G C G+ A+++F E D +++N LI +CK+G + A
Sbjct: 589 -DVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHF 647
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG----------LRPNLA- 230
+ +M +G+ PD +TY +++ A E R ++ K+ +SG L+P+
Sbjct: 648 FADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVD 707
Query: 231 ------------------------VYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDAS 265
Y +LV L G EAK+ D M++K + +D ++
Sbjct: 708 EAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSST 767
Query: 266 YKFMMKAL 273
Y +M+ L
Sbjct: 768 YITLMEGL 775
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 51/358 (14%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG A V ++ ++ G +DG+ +G ++ + G+ D + Y +L+ + G
Sbjct: 374 KGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADD--GLAPDVITYNTLIHAHCKAGNI 431
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEA-------------------- 103
+A +E V +K+ N+VL LC +++EA
Sbjct: 432 AKAYTLMDEMV--RRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYG 489
Query: 104 ---------------LKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
L+L+D M K+L ++ ++N + G GR K+AI+
Sbjct: 490 TVMAAYFKEYNSEPALRLWDEMIE-----KKLTPSISTYNTLIKGLSRMGRLKEAIDKLN 544
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
++ E PD ++N +I CK G L A + + +M + PD T LM+
Sbjct: 545 ELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNG 604
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYK 267
++D F V+ G + ++ YN L+ + + G +D A FF D+ + L+ D +Y
Sbjct: 605 KLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYN 664
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGI--EFSEELQEFVKGELSKEGR----EEEVV 319
++ ALS+ G+ +E ++ + + G + FS L + + ++ G+ EEE V
Sbjct: 665 VVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETV 722
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 64/137 (46%)
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
RL N +FN++ +C +G DA+ M + SPD +++N L++ C+ GML EA
Sbjct: 199 RLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEA 258
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
L M GV P TY L+ A + + M +G P+L YN L
Sbjct: 259 RALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAG 318
Query: 239 LVQVGMLDEAKSFFDIM 255
L Q G +DEA D M
Sbjct: 319 LCQAGKVDEAFRLKDEM 335
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 88/216 (40%), Gaps = 42/216 (19%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
AV N++L+A C G EA L RMK + P R ++N + Y G K A
Sbjct: 239 AVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTR-----PTYNTLVSAYARLGWIKQA 293
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VNPDEYTYGLLMD 202
+V M PD ++N L LC+ G + EA L EM G + PD TY L D
Sbjct: 294 TKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLAD 353
Query: 203 ACFEVNRVDDG-------------ATY----------------------FRKMVDSGLRP 227
ACF+ D AT KM D GL P
Sbjct: 354 ACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAP 413
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
++ YN L+ + G + +A + D MV++ LK+D
Sbjct: 414 DVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLD 449
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 139/326 (42%), Gaps = 16/326 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ R G L +K+ GV Y +L+ Y G +
Sbjct: 234 GLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKD--GVAPTRPTYNTLVSAYARLGWIK 291
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + EA+ N + N + LC GK DEA +L D M+ L ++
Sbjct: 292 QATKVV-EAMTANG-FEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGT----LLPDV 345
Query: 125 GSFNVMADGYCGQGRFK-DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N +AD C + R DA+ + +M E ++ N +I LCK+G L A
Sbjct: 346 VTYNTLADA-CFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLN 404
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M+D G+ PD TY L+ A + + T +MV GL+ + N ++ L +
Sbjct: 405 KMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEK 464
Query: 244 MLDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+EA+ ++ M D+ SY +M A + L + +++
Sbjct: 465 RYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYN 524
Query: 303 EFVKGELSKEGREEEVV----KLMEK 324
+KG LS+ GR +E + +LMEK
Sbjct: 525 TLIKG-LSRMGRLKEAIDKLNELMEK 549
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
++P+ YT+ LL+ + D + M GL P+ YN L+ + GML EA+
Sbjct: 200 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 259
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--VK 306
+ M K + +Y ++ A + G + + ++V + +G F +L + +
Sbjct: 260 ALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANG---FEPDLWTYNVLA 316
Query: 307 GELSKEGREEEVVKLMEKKER 327
L + G+ +E +L ++ ER
Sbjct: 317 AGLCQAGKVDEAFRLKDEMER 337
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 77/201 (38%), Gaps = 34/201 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M F D V + LM G +G D +LFE EK G D + Y +L++
Sbjct: 581 MVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEK--GKKVDVITYNTLIQTMCKD 638
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+ + + E ++ A N VL AL G+ +EA + ++ +
Sbjct: 639 GDVDTALHFFADM--EARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSF 696
Query: 121 AVNL------------------------------GSFNVMADGYCGQGRFKDAIEVFRKM 150
+ L ++ + +G C G+FK+A + +M
Sbjct: 697 SSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEM 756
Query: 151 GEYRCSPDTLSFNNLIDQLCK 171
+ S D+ ++ L++ L K
Sbjct: 757 MQKGMSVDSSTYITLMEGLVK 777
>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 689
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 152/327 (46%), Gaps = 19/327 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V + L+ GF + G+ D F LF+ ++++ G+ D + Y +L+ GYF GM + +
Sbjct: 179 VTFCTLINGFCKRGEMDRAFELFKVMEQR--GIAPDLIAYSTLIDGYFKAGMLGMGHKLF 236
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
++A+ + VK+ V +S +D G A ++ RM + P N+ ++ ++
Sbjct: 237 SQAL--HKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISP-----NVVTYTIL 289
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C GR +A ++ ++ + P +++++LID CK G L LY +M G
Sbjct: 290 IKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGY 349
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD YG+L+D + + + K + +RPN+ V+N L+ ++ DEA
Sbjct: 350 PPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALK 409
Query: 251 FFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI----LDDGGIEFSEELQEFV 305
F +M + +K D A+ +M+ G+L E L + + L+ + F + F
Sbjct: 410 VFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFC 469
Query: 306 KGELSKEGREEEVVKLMEKKEREKAEA 332
K G ++L + +R K A
Sbjct: 470 KNMKPTIG-----LQLFDLMQRNKIPA 491
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 122/252 (48%), Gaps = 9/252 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V YS L+ GF + G+ F L+E++ + G D V+YG L+ G +G+
Sbjct: 312 RGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKM--GYPPDVVIYGVLVDGLCKQGLM 369
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A+ + +G+ S++ + V NS++D C + DEALK+F M P +
Sbjct: 370 LHALRFSVKTLGQ--SIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKP-----D 422
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + + +GR K+ + +F +M + PD ++F L+D CKN +L+
Sbjct: 423 VATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFD 482
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + D ++++ F+ V++ + +F +++ + P++ YN ++ +
Sbjct: 483 LMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLR 542
Query: 244 MLDEAKSFFDIM 255
LDEA F+++
Sbjct: 543 RLDEAARIFEML 554
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 127/284 (44%), Gaps = 14/284 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ L+ G +DG F ++ ++ ++ G+ V Y SL+ G+
Sbjct: 274 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKR--GLEPSVVTYSSLIDGFCKY 331
Query: 61 GMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G Y + + G V + V ++D LC G AL+ + + P
Sbjct: 332 GNLRSGFALYEDMIKMGYPPDVVIYGV----LVDGLCKQGLMLHALRFSVKTLGQSIRP- 386
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N+ FN + DG+C R +A++VFR MG Y PD + L+ G L E
Sbjct: 387 ----NVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEG 442
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
L+ M G+ PD + LMDA + + G F M + + ++AV N ++
Sbjct: 443 LFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINL 502
Query: 239 LVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDE 281
L + ++EA FF+ +++ K++ D +Y M+ +LDE
Sbjct: 503 LFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDE 546
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 113/241 (46%), Gaps = 10/241 (4%)
Query: 41 GGVVSDGV-VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK 99
GG V GV +G ++ F KG +A++ ++ V E ++ V+ N +L L + +
Sbjct: 102 GGTVPFGVSAHGFVLDALFRKGEVTKALD-FHRLVMERG-FRVDIVSCNKILKGL-SVDQ 158
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
+ A ++ + + P N+ +F + +G+C +G A E+F+ M + +PD
Sbjct: 159 IEVASRMLSLVLDCGPAP-----NVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDL 213
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
++++ LID K GML +L+ + KGV D + +D + + +++
Sbjct: 214 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKR 273
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGK 278
M+ G+ PN+ Y L+ L Q G + EA + I+ + L+ +Y ++ G
Sbjct: 274 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGN 333
Query: 279 L 279
L
Sbjct: 334 L 334
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 106/275 (38%), Gaps = 61/275 (22%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
VV++ L+ G+ R D ++F + + G+ D +LM+ M+G +E + +
Sbjct: 389 VVFNSLIDGWCRLNRCDEALKVFRLMG--IYGIKPDVATITTLMRVTVMEGRLKEGLFLF 446
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN------- 123
++ AVA +++DA C N K L+LFD M+ P N
Sbjct: 447 FRMF--KMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLF 504
Query: 124 -----------------------LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
+ ++N M GYC R +A +F + P+ +
Sbjct: 505 KGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAV 564
Query: 161 SFNNLI---------------------------DQLCKNGMLAEAEELYGEMSDKGVNPD 193
+ LI D LCK G + EA ++ + D + PD
Sbjct: 565 TLTILIHTLCKNSDMDGALRIISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDAKILPD 624
Query: 194 EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
Y +L+ C +V R+ + A + M+ +G++P+
Sbjct: 625 VVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPD 659
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 8/253 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D + SL+ G+ + EEAM N+ V +K V +++D+LC NG D
Sbjct: 136 GFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMV--EMGIKPDVVIYTTIIDSLCKNGHVD 193
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
AL LF++M+N P ++ + + +G C GR++DA + R M + + PD ++
Sbjct: 194 NALSLFNQMENYGIRP-----DVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVIT 248
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
FN LID K G L +A+ELY EM + P+ +TY L++ R+D+ F M
Sbjct: 249 FNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLME 308
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLD 280
G P++ Y L+ + +++A K F+++ K L + +Y +++ GK +
Sbjct: 309 TKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPN 368
Query: 281 EILEIVGGILDDG 293
E+ G ++ G
Sbjct: 369 VAQEVFGHMVSRG 381
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 137/287 (47%), Gaps = 13/287 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V+Y+ ++ ++G D LF +++ G+ D V+Y SL+ G G
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENY--GIRPDVVMYTSLVNGLCNSGRWR 228
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + +K + N+++DA GK +A +L++ M P N+
Sbjct: 229 DADLLLRGMMKR--KIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAP-----NI 281
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + +G C +GR +A ++F M C PD +++ +LI+ CK + +A +++ E
Sbjct: 282 FTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYE 341
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ + TY L+ V + + F MV G+ PN+ YN L+ L G
Sbjct: 342 MSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGK 401
Query: 245 LDEAKSFFDIMVKK----LKMDDASYKFMMKALSDGGKLDEILEIVG 287
+++A F+ M K+ + + +Y ++ L GKL++ L + G
Sbjct: 402 VNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFG 448
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 12/225 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V Y+ L+ GF + + ++F E+ +K G+ + + Y +L++G+ + G
Sbjct: 310 KGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQK--GLTGNTITYTTLIQGFGLVGKP 367
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN---PPKRL 120
A E + V V + N +L LC NGK ++AL +F+ M+ PP
Sbjct: 368 NVAQEVFGHMVSR--GVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPP--- 422
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++NV+ G C G+ + A+ VF M + +++ +I +CK G + +A
Sbjct: 423 --NIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALN 480
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
L+ + KGV P+ TY ++ F + + FRKM + G+
Sbjct: 481 LFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 18/261 (6%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P +++Y L+ G +G D ++F ++ K G D V Y SL+ G+ E+AM
Sbjct: 279 PNIFTYTSLINGLCMEGRLDEARQMFYLMETK--GCFPDVVAYTSLINGFCKCKKVEDAM 336
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + E + + + +++ GK + A ++F M + PP N+ ++
Sbjct: 337 KIFYEM--SQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPP-----NIRTY 389
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYR---CSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
NV+ C G+ A+ +F M + P+ ++N L+ LC NG L +A ++G+
Sbjct: 390 NVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGD 449
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + ++ TY +++ + +V D F + G++PN+ Y ++ L + G+
Sbjct: 450 MQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGL 509
Query: 245 LDEAKSFFDIMVKKLKMDDAS 265
+ EA F +K+K D S
Sbjct: 510 MLEAHVLF----RKMKEDGVS 526
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 12/265 (4%)
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA++ ++ V S S + +L+ + KFD + L +H ++ +L
Sbjct: 54 EALDLFSHMV--ESRPLPSIIDFTRLLNVIAKMKKFDVVINL-----CKHLQIMGVSNDL 106
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ N++ + +C + A K+ + PD +F +LI+ C + EA + +
Sbjct: 107 YTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQ 166
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + G+ PD Y ++D+ + VD+ + F +M + G+RP++ +Y LV L G
Sbjct: 167 MVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGR 226
Query: 245 LDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+A +M +K+K D ++ ++ A GKL + E+ ++
Sbjct: 227 WRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTS 286
Query: 304 FVKGELSKEGREEE---VVKLMEKK 325
+ G L EGR +E + LME K
Sbjct: 287 LING-LCMEGRLDEARQMFYLMETK 310
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+F +A+++F M E R P + F L++ + K L + GV+ D YT
Sbjct: 51 QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCN 110
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
LLM+ + ++ +++ K++ G P++ + L+ ++EA S + MV+
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM 170
Query: 259 -LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+K D Y ++ +L G +D L + +++ GI + + L GR +
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQ-MENYGIRPDVVMYTSLVNGLCNSGRWRD 229
Query: 318 VVKLMEKKEREKAEA 332
L+ + K +
Sbjct: 230 ADLLLRGMMKRKIKP 244
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 158/324 (48%), Gaps = 12/324 (3%)
Query: 1 MFVKGFV-ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
M K +V AD V+YS ++ + +RL+ E+ K G+ + + L+
Sbjct: 137 MLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAK--GIFPNVYTFSILVDALCK 194
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
++AM A+ VK + V +++D C + ++AL +F+ M E P
Sbjct: 195 DRKGKQAMNLL--AMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEP-- 250
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ +N++ +G C + R +A+ +F++M + +PD +++N LID LCK G ++ +
Sbjct: 251 ---NVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSL 307
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL EM G D TY L+ A + + +D T +++ D G++PN+ Y L+ L
Sbjct: 308 ELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGL 367
Query: 240 VQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ G L++A F +I+ + + +Y M+ L G DE L ++ + D+ I +
Sbjct: 368 CKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDA 427
Query: 299 EELQEFVKGELSKEGREEEVVKLM 322
+ + LS++G + KL+
Sbjct: 428 VSYETIIYA-LSEKGETVKTNKLL 450
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 114/275 (41%), Gaps = 39/275 (14%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +L +L + A+ LF ++ E N K V L ++ + YC G +
Sbjct: 14 NHILASLVKINHYPTAISLFRQL--EFNGIKPSIVTL---TILMNCYCHTGGITFLFSIL 68
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD----- 202
K+ + P++++F LI +C NG EA + + G D+ +Y +LM+
Sbjct: 69 TKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKM 128
Query: 203 ----ACFEVNR-----------------------VDDGATYFRKMVDSGLRPNLAVYNRL 235
A ++ R V D + +M+ G+ PN+ ++ L
Sbjct: 129 GETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSIL 188
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
V L + +A + +M+KK +K + +Y +M ++++ L I ++ + G
Sbjct: 189 VDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQE-G 247
Query: 295 IEFSEELQEFVKGELSKEGREEEVVKLMEKKEREK 329
+E + + L K+ R +E + L ++ +K
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKK 282
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+P L FN+++ L K A L+ ++ G+ P T +LM+ + +
Sbjct: 7 TPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFS 66
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
K++ G PN + L+ + G EA F D +V K+D SY +M L
Sbjct: 67 ILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLC 126
Query: 275 DGG 277
G
Sbjct: 127 KMG 129
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 152/326 (46%), Gaps = 11/326 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG V +VY+ L+ G D + + ++E GV + Y +LM GY
Sbjct: 208 MRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREV--GVYPNVYTYNTLMDGYCKL 265
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A+ Y + +GE + V ++D LC G+ A LF M P
Sbjct: 266 ANAKQALRLYQDMLGEG--LVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTP--- 320
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +N + D YC G +A+ +F ++ + SPD +++ LI LC EA
Sbjct: 321 --NIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGN 378
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M+ +G+ + TY L+D C + ++D +M ++G+ PN+ ++ L+
Sbjct: 379 IFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYC 438
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
++ L A + ++++K L D +Y M+ G + E L++ +LD+G
Sbjct: 439 KIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCY 498
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKK 325
+ + G L K+G+ + ++L +K
Sbjct: 499 TISCLLDG-LCKDGKISDALELFTEK 523
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 130/276 (47%), Gaps = 23/276 (8%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY+ L+ + + GD LF EL+ V D Y L++G EEA +
Sbjct: 324 VYNSLIDAYCKVGDVSEAMALFLELER--FEVSPDVFTYSILIRGLCSVSRTEEAGNIFE 381
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+ E + ++V NS++D C GK D+AL++ +M P N+ +F+ +
Sbjct: 382 KMTKEG--ILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEP-----NVITFSTLI 434
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
DGYC + A+ ++ +M SPD +++ +ID CK G + EA +LY +M D G+
Sbjct: 435 DGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGIT 494
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYF---------RKMVDS-GLRPNLA---VYNRLVGK 238
P+ YT L+D + ++ D F R VD+ G +P+L Y L+
Sbjct: 495 PNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHG 554
Query: 239 LVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKAL 273
L Q G +A K F D+ L+ D+ Y M++ L
Sbjct: 555 LCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 24/260 (9%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G +A+ V Y+ L+ G ++G D + ++ E GV + + + +L+ GY
Sbjct: 386 EGILANSVTYNSLIDGCCKEGKMDKALEICSQMTE--NGVEPNVITFSTLIDGYCKIRNL 443
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ AM Y+E V + S+ V +++D C G EALKL+ M + P N
Sbjct: 444 QAAMGIYSEMVIK--SLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITP-----N 496
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEY---RCSPDT----------LSFNNLIDQLC 170
+ + + DG C G+ DA+E+F + E+ RC+ D +++ LI LC
Sbjct: 497 CYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLC 556
Query: 171 KNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
++G ++A +L+ +M G+ PDE Y +++ F+V + M+ G+ PN A
Sbjct: 557 QDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYIL--MMLHADMLKFGVIPNSA 614
Query: 231 VYNRLVGKLVQVGMLDEAKS 250
V+ L + G L A++
Sbjct: 615 VHVILCECYQESGFLKSAQN 634
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 130/302 (43%), Gaps = 26/302 (8%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S + +++D C G A ++FD M+ + P + + ++ G C + ++
Sbjct: 181 SVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIV-----YTILIRGLCSDNKIEE 235
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A + R M E P+ ++N L+D CK +A LY +M +G+ PD T+G+L+D
Sbjct: 236 AESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILID 295
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-FFDIMVKKLKM 261
+ + F M+ + PN+AVYN L+ +VG + EA + F ++ ++
Sbjct: 296 GLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSP 355
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
D +Y +++ L + +E I + +G + S + G KEG+ ++ +++
Sbjct: 356 DVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDG-CCKEGKMDKALEI 414
Query: 322 MEKKEREKAE-------------AKAREAEAAEAAKRSARAAIASLIPSKFGDKVGGTEM 368
+ E K R +AA + I SL P D V T M
Sbjct: 415 CSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIY--SEMVIKSLSP----DVVTYTAM 468
Query: 369 AD 370
D
Sbjct: 469 ID 470
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 73 AVGENSSVKMSAVANN---SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
A E S +K S N ++ LC +EAL ++ ++ A+ + + NV
Sbjct: 101 AFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHKVGA--------ALTIQACNV 152
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ GRF+ ++ +M SP ++F LID C+ G L A+E++ EM KG
Sbjct: 153 LLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKG 212
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ P Y +L+ N++++ + R M + G+ PN+ YN L+ ++ +A
Sbjct: 213 IVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQAL 272
Query: 250 SFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
+ D++ + L D ++ ++ L G++
Sbjct: 273 RLYQDMLGEGLVPDVVTFGILIDGLCKFGEM 303
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 135/282 (47%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ G+ + G +F E+ ++ G+V D V + SL+
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR--GLVPDVVTFTSLIHATCKA 306
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A+ + ++M+ V +++D C G D+AL + M+ P
Sbjct: 307 GNLEQAVALVAQM--RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP--- 361
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +N + +GYC GR A E+ R+M R PD ++++ +I CK G L A +
Sbjct: 362 --SVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M KGV PD TY L+ E R++D F M+ G++P+ Y L+
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDE 281
+ G +++A S D M++K + D +Y ++ LS + E
Sbjct: 480 KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 140/320 (43%), Gaps = 45/320 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ L+ F R G+ DG R+ ++E+ G + V + S++ G
Sbjct: 182 GCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREE-GNAKPNLVTFNSMVNG-------- 232
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
LC G+ + A K+FD M E P ++
Sbjct: 233 -----------------------------LCKAGRMEGARKVFDEMVREGLAP-----DV 258
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S+N + GYC G +++ VF +M + PD ++F +LI CK G L +A L +
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++G+ +E T+ L+D + +DD +M G++P++ YN L+ ++G
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Query: 245 LDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+D A+ M K++K D +Y ++ G LD ++ +L G + +
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438
Query: 304 FVKGELSKEGREEEVVKLME 323
++G L +E R + +L E
Sbjct: 439 LIRG-LCEEKRLNDACELFE 457
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 135/275 (49%), Gaps = 10/275 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D V ++ L+ + G+ + L +++E+ G+ + V + +L+ G+ K
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER--GLRMNEVTFTALIDGFCKK 341
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ E ++ S V N++++ C G+ D A +L M+ KR+
Sbjct: 342 GFLDDALLAVEEM--RKCGIQPSVVCYNALINGYCKLGRMDLARELIREME-----AKRV 394
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + GYC G A ++ +KM + PD +++++LI LC+ L +A E
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M GV PDE+TY L+D + V+ + +M+ G+ P++ Y+ L+ L
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514
Query: 241 QVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALS 274
+ EA + F + + D+ Y +M S
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS 549
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 139/309 (44%), Gaps = 31/309 (10%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V YS ++ G+ + G+ D F+L +++ +K GV+ D + Y SL++G + +A E
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKK--GVLPDAITYSSLIRGLCEEKRLNDACE 454
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + V+ +++D C G ++AL L D M + P ++ +++
Sbjct: 455 LFENML--QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP-----DVVTYS 507
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL---------------IDQLCKNG 173
V+ +G R K+A + K+ PD + ++ L + C G
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
++ EA+++Y M D+ D Y +L+ V ++ ++M+ SG PN
Sbjct: 568 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 627
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSD----GGKLDEILEIVGGI 289
LV L + GM+ EA + ++ + DA KAL D G +D +++++ G+
Sbjct: 628 SLVRGLFEEGMVVEADNAIQDLLTCCPLADAEAS---KALIDLNRKEGNVDALIDVLCGM 684
Query: 290 LDDGGIEFS 298
DG + S
Sbjct: 685 ARDGLLPSS 693
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+P ++N ++ L + L A M GV P+ YTY +L+ A R+++
Sbjct: 115 APSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVG 173
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMMKAL 273
M +G PN YN LV + G LD A+ +M ++ K + ++ M+ L
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGL 233
Query: 274 SDGGKLD 280
G+++
Sbjct: 234 CKAGRME 240
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 159/360 (44%), Gaps = 51/360 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + D + + L+ G + G + R+ E L++ G V D + Y L+ GY
Sbjct: 136 MVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED--SGAVPDVITYNVLISGYCKT 193
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR-MKNEHNPPKR 119
G A++ + + SV V N++L LC++GK EA+++ DR M+ E P
Sbjct: 194 GEIGSALQ-----LLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYP--- 245
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ ++ ++ + C + A+++ +M + C PD +++N LI+ +CK G L EA
Sbjct: 246 ---DVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 302
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
M G P+ T+ +++ + R D + +M+ G P++ +N L+ L
Sbjct: 303 RFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFL 362
Query: 240 VQVGML-----------------------------------DEAKSFFDIMVKK-LKMDD 263
+ G++ + A + DIMV + D
Sbjct: 363 CRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDI 422
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+Y ++ AL GK+D +EI+ + G + G LSK G+ ++ +KL++
Sbjct: 423 VTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDG-LSKVGKTDDAIKLLD 481
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 145/320 (45%), Gaps = 11/320 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V Y+ L+ G ++G D R + G + + + +++ G
Sbjct: 276 KGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSY--GCQPNVITHNIILRSMCSTGRW 333
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + E + + S S V N +++ LC G A+ + ++M P L
Sbjct: 334 MDAEKFLAEMIRKGCSP--SVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSL--- 388
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N + C + + AIE M C PD +++N L+ LCK+G + A E+
Sbjct: 389 --SYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 446
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++ KG +P TY ++D +V + DD +M GL+P++ Y+ LVG L + G
Sbjct: 447 QLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREG 506
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+DEA +FF D+ +K + +Y +M L + ++ + ++ G
Sbjct: 507 KVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYM 566
Query: 303 EFVKGELSKEGREEEVVKLM 322
++G L+ EG +E ++L+
Sbjct: 567 ILIEG-LAYEGLAKEALELL 585
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 12/239 (5%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
VR+G+ + F+ E++ + G + D + SL++G G +A + E+S
Sbjct: 120 LVRNGELEEGFKFLEDMVCR--GDIPDIIACTSLIRGLCKTGKTWKATRVME--ILEDSG 175
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ N ++ C G+ AL+L DRM ++ ++ ++N + C G+
Sbjct: 176 AVPDVITYNVLISGYCKTGEIGSALQLLDRMS--------VSPDVVTYNTILRTLCDSGK 227
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
K+A+EV + + C PD +++ LI+ CK + +A +L EM DKG PD TY +
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
L++ + R+D+ + M G +PN+ +N ++ + G +A+ F M++K
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK 346
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 34/225 (15%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV---------------------- 122
V NN+ L L NG+ +E K + M + P +A
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170
Query: 123 --------NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
++ ++NV+ GYC G A+++ +M SPD +++N ++ LC +G
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGK 227
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L EA E+ + PD TY +L++A + + V +M D G +P++ YN
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
L+ + + G LDEA F + M + + ++ +++++ G+
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGR 332
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 9/190 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ +DG D + +L K G + Y +++ G
Sbjct: 413 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSK--GCSPVLITYNTVIDGLSKV 470
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A++ +E G+ +K + ++++ L GK DEA+ F ++ P
Sbjct: 471 GKTDDAIKLLDEMKGK--GLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKP--- 525
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++N + G C + AI+ M C P S+ LI+ L G+ EA E
Sbjct: 526 --NAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALE 583
Query: 181 LYGEMSDKGV 190
L E+ +GV
Sbjct: 584 LLNELCSRGV 593
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 160/324 (49%), Gaps = 11/324 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VK D V Y+ L+ G + G LF ++ K + D + L+ G +
Sbjct: 230 MIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLK--NIKPDVYTFNILVDGLCKE 287
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A AV V + V NS++D + ++A +F+ M P
Sbjct: 288 GEMKKARNVL--AVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTP--- 342
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+++M +G C +A+ +F++M +P+T+++N+LID L K G +++A +
Sbjct: 343 --DVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWD 400
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM ++G D TY L+DA + ++VD T K+ D G++PN+ Y LV L
Sbjct: 401 LVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLC 460
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G L +A++ + D+++K +D Y M+ L G DE L +V + D+G I +
Sbjct: 461 KNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAV 520
Query: 300 ELQEFVKGELSKEGREEEVVKLME 323
+ V+ L + + ++ VKL+
Sbjct: 521 TYETLVRA-LFENDKNDKAVKLLR 543
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D YS ++ G + D LF+E+ K + + V Y SL+ G G
Sbjct: 338 RGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSK--SMAPNTVTYNSLIDGLLKYGRI 395
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + NE N + +S+LDALC N + D+A+ L ++K++ P N
Sbjct: 396 SDAWDLVNEM--HNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQP-----N 448
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ ++ DG C GR KDA V++ + D +N +++ LCK G+ EA L
Sbjct: 449 IYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVS 508
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+M D G PD TY L+ A FE ++ D R+M+ G
Sbjct: 509 KMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 5/175 (2%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V +++ LC NGK EAL D + K ++ S+ + +G C G + A
Sbjct: 134 TVTITTLIKGLCLNGKVREALHFHDDVI-----AKGFHLDQVSYGTLINGLCKTGETRAA 188
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
++V RK+ P+ + +N +ID LCK+ ++ A +L EM K + PD TY L+
Sbjct: 189 LQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYG 248
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
C V R+ + F +M+ ++P++ +N LV L + G + +A++ +M+K+
Sbjct: 249 CLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQ 303
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 122/282 (43%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +K D ++ L+ F G + F + ++ + G D V +L+KG +
Sbjct: 90 MELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKL--GFHPDTVTITTLIKGLCLN 147
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA+ +++ + + + V+ ++++ LC G+ AL++ ++ P
Sbjct: 148 GKVREALHFHDDVIAK--GFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQP--- 202
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +N + D C A ++ +M R PD +++ LI G L EA
Sbjct: 203 --NVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVG 260
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ +M K + PD YT+ +L+D + + M+ G+ N+ YN L+
Sbjct: 261 LFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYF 320
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
V ++A F+ M ++ + D SY M+ L +DE
Sbjct: 321 LVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDE 362
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 103/219 (47%), Gaps = 7/219 (3%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+ +N + + V+ N +L +L F A+ +M+ K++ +
Sbjct: 45 DDAVSSFNHILHMRNPVQ-PIFEFNKILSSLVKLNHFHTAISFSKQME-----LKQIQPD 98
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +FN++ + +C G A V K+ + PDT++ LI LC NG + EA +
Sbjct: 99 LFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHD 158
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++ KG + D+ +YG L++ + RK+ ++PN+ +YN ++ L +
Sbjct: 159 DVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDK 218
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
++ A +++VK++ D +Y ++ G+L E
Sbjct: 219 LVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKE 257
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 4/151 (2%)
Query: 142 DAIEVFRKMGEYRCSP--DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
DA+ F + R +P FN ++ L K A +M K + PD +T+ +
Sbjct: 46 DAVSSFNHILHMR-NPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNI 104
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKK 258
L++ + ++ + K+ G P+ L+ L G + EA F D++ K
Sbjct: 105 LINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKG 164
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
+D SY ++ L G+ L+++ I
Sbjct: 165 FHLDQVSYGTLINGLCKTGETRAALQVLRKI 195
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 127/272 (46%), Gaps = 10/272 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V+Y+ ++ G +D +F E+K K GV D Y LM G +EEA
Sbjct: 223 DIVIYNTIIDGLCKDRLVSEALDIFSEIKGK--GVRPDVFTYSILMHGLCNSDQKEEASA 280
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+NE + N + V N ++D LC G EA + M + P N ++N
Sbjct: 281 LFNEMMSLN--IMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEP-----NYATYN 333
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ +GYC Q + +A VF M C P+ +S+N LI+ CK + EA EL+ EMS +
Sbjct: 334 SLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFR 393
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ P+ + Y L+ + R + F+ M G P+L L+ L ++G LD A
Sbjct: 394 GLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNA 453
Query: 249 KSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
F M LK + +Y +++A+ GK+
Sbjct: 454 LRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 125/237 (52%), Gaps = 10/237 (4%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
AV +S+++ LC KF A++ FD M P NL ++N + G+C G+ A
Sbjct: 154 AVTFSSLINGLCFEDKFARAMEFFDEMVASGYQP-----NLHTYNTIIKGFCKIGKTTVA 208
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ + +KM + PD + +N +ID LCK+ +++EA +++ E+ KGV PD +TY +LM
Sbjct: 209 VGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHG 268
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
++ ++ + F +M+ + P++ +N LV KL + GML EA+ IM++K ++ +
Sbjct: 269 LCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPN 328
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGG----IEFSEELQEFVKGELSKEGRE 315
A+Y +M K+ E + ++ G + ++ + + K + E RE
Sbjct: 329 YATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARE 385
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 135/282 (47%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D V +S L+ G + F+E+ G + Y +++KG+ G
Sbjct: 149 GFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVA--SGYQPNLHTYNTIIKGFCKIGKTT 206
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ + + + + V N+++D LC + EAL +F +K + P ++
Sbjct: 207 VAVGLLKKM--DKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRP-----DV 259
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++++ G C + ++A +F +M PD ++FN L+D+LCK GML+EA+ +
Sbjct: 260 FTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKI 319
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +KGV P+ TY LM+ N+V + F M+ G PN+ YN L+ +
Sbjct: 320 MIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQR 379
Query: 245 LDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
+DEA+ FD M + L + +Y ++ L G+ E E+
Sbjct: 380 IDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 8/219 (3%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A+ +N + ++ V + +L AL + L L R++ R+ +
Sbjct: 66 EDALFSFNHMIHKHPLP--CIVEFDKLLSALVRIKHYGTVLSLSKRIE-----LLRIERD 118
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ FN++ + + R A V K+ + PD ++F++LI+ LC A A E +
Sbjct: 119 VFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFD 178
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G P+ +TY ++ ++ + +KM +G RP++ +YN ++ L +
Sbjct: 179 EMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDR 238
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
++ EA F +I K ++ D +Y +M L + + +E
Sbjct: 239 LVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEE 277
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + + V Y+ L+ G+ + D LF+E+ + G++ + Y +L+ G
Sbjct: 355 MITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFR--GLIPNTFNYNTLISGLCQA 412
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA E + + + S + V +LD+LC G D AL+LF M++ P
Sbjct: 413 GRHCEARELFKDMQAQGCSPDL--VTCTILLDSLCKLGYLDNALRLFRAMQDSCLKP--- 467
Query: 121 AVNLGSFNVM 130
NL +++++
Sbjct: 468 --NLVTYDIL 475
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 149/353 (42%), Gaps = 45/353 (12%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V YS L+ RD + +F +K K G+ D Y SL++G +EA
Sbjct: 234 VTYSTLIDSLCRDRLVNEALDIFSYMKAK--GISPDIFTYTSLIQGLCKFSRWKEASALL 291
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL-------------------------- 104
NE N + V N ++D C GK EAL
Sbjct: 292 NEMTSLN--IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYS 349
Query: 105 ---------KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
KLF M + P N+ S+N++ +GYC R +A+++F +M
Sbjct: 350 LWTDVVEARKLFHVMITKGCKP-----NIFSYNILINGYCKAKRIDEAMQLFNEMIHQGL 404
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+P+ +S+N LI C+ G L EA++L+ M G PD +TY +L+D + +
Sbjct: 405 TPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFR 464
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALS 274
FR M + L+PNL +Y LV + + G +A+ F ++ V+ L+ Y ++ L
Sbjct: 465 LFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLC 524
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
G LDE LE + DG ++G L + ++ + E ++R
Sbjct: 525 KEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDR 577
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 91/174 (52%), Gaps = 5/174 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+ V ++++ LC G+F +A++LFD M + P ++ ++N + +G C G
Sbjct: 162 TIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQP-----DVYTYNTIINGLCKIGETAA 216
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A + +KM E C P+ ++++ LID LC++ ++ EA +++ M KG++PD +TY L+
Sbjct: 217 AAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQ 276
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
+ +R + + +M + P++ +N LV + G + EA M
Sbjct: 277 GLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMT 330
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 116/253 (45%), Gaps = 8/253 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ V + +L+ G G +A+E +++ V + + N++++ LC G+
Sbjct: 158 GLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGC--QPDVYTYNTIINGLCKIGETA 215
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
A L +M+ P N+ +++ + D C +A+++F M SPD +
Sbjct: 216 AAAGLLKKMEEAGCQP-----NMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFT 270
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ +LI LCK EA L EM+ + PD T+ +L+D + +V + + M
Sbjct: 271 YTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMT 330
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
+ G+ PN+ Y+ L+ + EA+ F +M+ K K + SY ++ ++D
Sbjct: 331 EMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRID 390
Query: 281 EILEIVGGILDDG 293
E +++ ++ G
Sbjct: 391 EAMQLFNEMIHQG 403
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L+ N+ + ++ + +C R V K+ + P ++F LI+ LCK G A+A
Sbjct: 124 LSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAV 183
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ +M KG PD YTY +++ ++ A +KM ++G +PN+ Y+ L+ L
Sbjct: 184 ELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSL 243
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
+ +++EA F M K + D +Y +++ L + E
Sbjct: 244 CRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKE 286
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ L+ GF + G LF + G + D Y L+ G+ +
Sbjct: 399 MIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCT--NGNLPDLFTYSILLDGFCKQ 456
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + +++ +K + V ++ A+C +G +A KLF + + P
Sbjct: 457 GYLGKAFRLFRAM--QSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQP--- 511
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + + +G C +G +A+E FR M C PD +S+N +I L ++ + A
Sbjct: 512 --HVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALL 569
Query: 181 LYGEMSDKGVNPD 193
L GEM D+G D
Sbjct: 570 LVGEMRDRGFIAD 582
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE-ELYGEMSDKGVNPDEYTYGLL 200
DA+ F M + P + F L+ + K G + L +M G++P+ YT +
Sbjct: 75 DALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIF 134
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-L 259
M+ ++ RVD G + K++ GL+P + + L+ L +VG +A FD MV K
Sbjct: 135 MNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGC 194
Query: 260 KMDDASYKFMMKALSDGG 277
+ D +Y ++ L G
Sbjct: 195 QPDVYTYNTIINGLCKIG 212
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 150/322 (46%), Gaps = 11/322 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF D Y+ L+ G + G+ + + ++ L + V Y +L+ +
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMI--LRDFSPNTVTYNTLISTLCKE 399
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA E V + + NS++ LC A++LF+ MK + P
Sbjct: 400 NQVEEATELAR--VLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEF 457
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N++ D C +GR ++A+ + ++M CS + +++N LID CKN + EAEE
Sbjct: 458 -----TYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEE 512
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM +G++ + TY L+D + RV++ A +M+ GL+P+ YN L+
Sbjct: 513 IFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFC 572
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G + +A M + D +Y ++ LS G+++ ++ + G + +
Sbjct: 573 RAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQ 632
Query: 300 ELQEFVKGELSKEGREEEVVKL 321
+K L +E R E V+L
Sbjct: 633 TYNPVIKA-LFREKRTSEAVRL 653
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 11/292 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + D ++ L+ G + LFEE+K K G D Y L+ +G
Sbjct: 415 KGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTK--GCHPDEFTYNMLIDSLCSRGRL 472
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EEA+ E E+S + V N+++D C N + +EA ++FD M+ + ++ N
Sbjct: 473 EEALSLLKEM--ESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG-----ISRN 525
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + DG C R ++A ++ +M PD ++N+L+ C+ G + +A ++
Sbjct: 526 VVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQ 585
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M+ G PD TYG L+ + RV+ + R + G+ YN ++ L +
Sbjct: 586 TMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREK 645
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKAL-SDGGKLDEILEIVGGILDDG 293
EA F M++K DA +YK + + L S GG + E ++ + + D G
Sbjct: 646 RTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKG 697
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 147/327 (44%), Gaps = 30/327 (9%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
FV V+Y ++ +DG + R+ +E+K + +G F+ +E
Sbjct: 101 FVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKH----------TGCEIRRGTFLILIESY 150
Query: 66 A-MECYNEAVG------ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
A E ++EAV E +K+ A N +L+ L + K LKL + + N +
Sbjct: 151 AKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNK----LKLVE-IVNSRMVSR 205
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ ++ +FN++ C + + AI + +MG Y SPD +F L+ + G + A
Sbjct: 206 GIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGA 265
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ +M G T +L+ + R+++ ++ +M + G RP+ +N LV
Sbjct: 266 LRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNG 325
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGG-ILDDGGIE 296
L ++G + A D+M+++ D +Y ++ L G+++E +EI+ IL D
Sbjct: 326 LCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRD---- 381
Query: 297 FSEELQEF--VKGELSKEGREEEVVKL 321
FS + + L KE + EE +L
Sbjct: 382 FSPNTVTYNTLISTLCKENQVEEATEL 408
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 106/240 (44%), Gaps = 7/240 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ G + AL++ ++M P + VN V+ GYC +GR ++ +
Sbjct: 250 TTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVN-----VLVHGYCKEGRIEEVLSFI 304
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M PD +FN+L++ LC+ G + A E+ M +G +PD +TY L+ ++
Sbjct: 305 DEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKL 364
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
V++ +M+ PN YN L+ L + ++EA ++ K + D ++
Sbjct: 365 GEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 424
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
+++ L +E+ + G E + L GR EE + L+++ E
Sbjct: 425 NSLIQGLCLTNNHRLAMELFEE-MKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEME 483
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 131/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 118 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRXGDLD 175
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 176 EGFXLKSXMLA--SGVQPDVYTYSVLINGLCKESKMDDANELFDEML-----VKGLVPNG 228
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A L E
Sbjct: 229 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 288
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L++ C + +D + ++M+ +R + Y L+ Q G
Sbjct: 289 MSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGR 348
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 349 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKXG 382
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V +GV + +L+ G+
Sbjct: 184 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLVPNGVTFTTLIDGHCKN 241
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI 299
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + +G C +G A E ++M + D +++ LI C+ G +AE+
Sbjct: 300 -----TYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEK 354
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 355 MLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLM 410
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E+
Sbjct: 56 FSGLIAAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 115
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP++ YN L+ ++ G LD
Sbjct: 116 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLD 175
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E M+ ++ D +Y ++ L K+D+ E+ +L G + +
Sbjct: 176 EGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 235
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 236 DGH-CKNGR 243
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D A LFD M K L N
Sbjct: 195 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDGANGLFDEML-----VKGLVPNG 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCK G L +A +L E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD++TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 308 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 368 SVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKG 401
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ DG LF+E+ K G+V +GV + +L+ G+
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVK--GLVPNGVTFTTLIDGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G +A L D M + P +
Sbjct: 261 GRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKF 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 319 -----TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 374 MLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 429
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 88/218 (40%), Gaps = 14/218 (6%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + + AV +
Sbjct: 12 NSTFRHTLHSYCTMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSD 71
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 72 IYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYE 131
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP++ YN L+ +++G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
LDE M+ ++ D +Y ++ L K+D
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMD 229
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 145/313 (46%), Gaps = 22/313 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFE---ELKEK--LGGVVSDGVVYGSLMKGYF 58
KGF + + YS L+ G R+ R E +L EK L G D V Y +L+ G
Sbjct: 216 KGFSPNVITYSTLISGLCRE------LRRLESARQLLEKMVLNGCKPDIVSYNALIHGLA 269
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ EA++ + + + ++ N ++D L + +EA +LF + P
Sbjct: 270 REQGVSEALKLFGSVLRQGYEPEVPTY--NILIDGLLKEDRVNEAFELFSGLVKHGLEPD 327
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ ++ V DG C GR +DA+ + + M E C PD +S N +I+ LCK + EA
Sbjct: 328 AI-----TYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEA 382
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E L M KG +P+ ++ L+ + T F++M+ G++P + YN LV
Sbjct: 383 EVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDG 442
Query: 239 LV---QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGG 294
L Q G + EA + FD M++K ++ D +Y ++ L GKLD+ ++G + G
Sbjct: 443 LCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGC 502
Query: 295 IEFSEELQEFVKG 307
I + G
Sbjct: 503 IPNVYTYNSLISG 515
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 157/331 (47%), Gaps = 17/331 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ VKG D ++ + G R +F+ +++ G + + Y +L+ G
Sbjct: 42 LLVKGL-CDISTFNIYISGLCRASRIGDAQTVFDGMRKH--GFWPNRITYNALLSGLCNG 98
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A Y + S + V N++L C GK DEALK+FD P
Sbjct: 99 GRMSDAQALYERMIKAGYSPDV--VTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVP--- 153
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N + +G+C + +A + ++M PD +++N+L++ LCKNG + EA
Sbjct: 154 --DVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARM 211
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L + DKG +P+ TY L+ C E+ R++ KMV +G +P++ YN L+ L
Sbjct: 212 L---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGL 268
Query: 240 VQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ + EA K F ++ + + + +Y ++ L +++E E+ G++ G +
Sbjct: 269 AREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDA 328
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREK 329
F+ G L K GR E+ + LM K EK
Sbjct: 329 ITYTVFIDG-LCKAGRVEDAL-LMLKDMDEK 357
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G D + Y+ + G + G + + +++ EK G V D V + +++ G +
Sbjct: 322 HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK--GCVPDVVSHNAVINGLCKEKRV 379
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + E +A++ N+++ C GK+ +A+ F M P
Sbjct: 380 DEAEVLLSGM--EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP-----T 432
Query: 124 LGSFNVMADGYC---GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++N++ DG C +GR K+AI +F M E PD ++++ LID L K G L +A
Sbjct: 433 VVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARR 492
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L G M KG P+ YTY L+ +++VD+ F MV+ G P+ Y ++ L
Sbjct: 493 LLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALC 552
Query: 241 QVGMLDEAKSFFD 253
+ M+D+A + FD
Sbjct: 553 KQEMVDKALALFD 565
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 10/236 (4%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+L +L +GK ++A + +++ + ++ +FN+ G C R DA VF
Sbjct: 22 LLRSLLKSGKIEKAHRFVEQLLVKG------LCDISTFNIYISGLCRASRIGDAQTVFDG 75
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M ++ P+ +++N L+ LC G +++A+ LY M G +PD TY L+ +V +
Sbjct: 76 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGK 135
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKF 268
+D+ F V G P++ YN L+ + LDEA+ MV + L D +Y
Sbjct: 136 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNS 195
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ L G++DE + I+D G + G + R E +L+EK
Sbjct: 196 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEK 248
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
SPD + L+ L K+G + +A ++ KG+ D T+ + + +R+ D T
Sbjct: 13 SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQT 71
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
F M G PN YN L+ L G + +A++ ++ M+K D +Y ++
Sbjct: 72 VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
GKLDE L+I G + G + + G K + +E +++++ E
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALING-FCKADKLDEAQRILQRMVSE 184
>gi|255661008|gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 369
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 123/240 (51%), Gaps = 9/240 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +K+ GG V D + YG L+ G+ G +++
Sbjct: 62 FNIMMRGLFDNGRVDEVNSIWELMKK--GGYVEDSITYGILVHGFCKNGYINKSLRVLET 119
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A E + A A +++++ LC K ++A+ + + M P N +N + +
Sbjct: 120 A--ERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKP-----NTHVYNALIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G + +DAI VFR+MG CSP +++N LI+ LCK+ EA +L EM +KG+ P
Sbjct: 173 GLIGASKSEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
TY LLM ++++ + ++ +G +P++ ++N L+ L VG A S +
Sbjct: 233 SVITYSLLMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLY 292
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 131/281 (46%), Gaps = 11/281 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+V D + Y L+ GF ++G + R+ E E+ GGV+ D Y +++ G + E
Sbjct: 89 GYVEDSITYGILVHGFCKNGYINKSLRVLET-AERKGGVL-DAFAYSAMINGLCKETKLE 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ N + S K + N++++ L K ++A+++F M H P +
Sbjct: 147 KAISVLNGMI--KSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGITHCSP-----TI 199
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ +G C RF +A ++ ++M E +P ++++ L+ LC + A +L+ +
Sbjct: 200 VTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKIEMALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ G PD + L+ V + + + M PNL N L+ + G
Sbjct: 260 VTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLVTQNTLMEGFYKDGD 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL-DEIL 283
+ A + I+ +L+ D SY +K L ++ D IL
Sbjct: 320 MRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAIL 360
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 127/280 (45%), Gaps = 14/280 (5%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+++++ + V D VVY +++ G++ G ++ E + E +G + S
Sbjct: 4 GDIDGAERVYKDIVDS--KVSPDAVVYNAMLNGFYRAGRIKDCFELW-EMMGREGN--RS 58
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ N ++ L +NG+ DE +++ MK + ++ ++ G+C G +
Sbjct: 59 VASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSI-----TYGILVHGFCKNGYINKS 113
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ V D +++ +I+ LCK L +A + M G P+ + Y L++
Sbjct: 114 LRVLETAERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALING 173
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
++ +D FR+M + P + YN L+ L + EA M++K L
Sbjct: 174 LIGASKSEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPS 233
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+Y +MK L G K++ L++ + +G F ++Q
Sbjct: 234 VITYSLLMKGLCLGHKIEMALQLWNQVTKNG---FKPDVQ 270
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++ +VDS + P+ VYN ++ + G + + +++M ++ AS+ M
Sbjct: 6 IDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREGNRSVASFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D G++DE+ I + G +E S V G K G + ++++E ER+
Sbjct: 66 MRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHG-FCKNGYINKSLRVLETAERK 123
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
C++G + AE +Y ++ D V+PD Y +++ + R+ D + M G R ++
Sbjct: 1 CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREGNR-SV 59
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIV-- 286
A +N ++ L G +DE S +++M K ++D+ +Y ++ G +++ L ++
Sbjct: 60 ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLET 119
Query: 287 ----GGILD 291
GG+LD
Sbjct: 120 AERKGGVLD 128
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++ + + + SPD + +N +++ + G + + EL+ M +G N
Sbjct: 1 CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREG-NRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ RVD+ + + M G + Y LV + G ++++ +
Sbjct: 60 ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLET 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
+K + DA +Y M+ L KL++ + ++ G++ G + + G +
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASK 179
Query: 314 REEEV 318
E+ +
Sbjct: 180 SEDAI 184
>gi|242058297|ref|XP_002458294.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
gi|241930269|gb|EES03414.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
Length = 534
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 148/322 (45%), Gaps = 23/322 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSD--GVFRLFEELKEKLGGVVSDGVVYGSLMKGYF 58
M GF Y+ L+ D +D RLF + + D Y +++ G
Sbjct: 154 MRAAGFAPTAATYNVLLKAQCSDAAADIKDALRLFRNIPKP------DVCSYNTIIDGLC 207
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+G A+E ++E VG+ + + V +++ L G FD+ALK+FD M P
Sbjct: 208 RRGRLAAALEMFSEMVGK--CIAPTVVTYTTLIHWLAREGCFDDALKIFDEMGRRGVSP- 264
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
NL +++ + DG C GR A+E+ +M + + P+T++++++ID LCK ML+EA
Sbjct: 265 ----NLVTYSSLIDGLCKGGRAASALELMDRMIKEKKLPNTITYSSVIDGLCKEHMLSEA 320
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY------ 232
E+ M +G PD +G L+ + R + A Y +M+ +G+ PN +
Sbjct: 321 MEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMILAGIEPNRVTWSLHTRI 380
Query: 233 -NRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
N ++ L G L A + + + + D ++ ++++ S +++ +V +L
Sbjct: 381 NNTVLTALCAKGELGRAFQVYQSTRTRSISTDPTTFHLLVESFSKKKNMEKAAHVVLDML 440
Query: 291 DDGGIEFSEELQEFVKGELSKE 312
+ I E + G SK+
Sbjct: 441 SERCIPERETWDVIISGYWSKK 462
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 143 AIEVFRKMGEYRCSPDTL-SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
A+ +FR P + S+N ++ L + L A L +M G P TY +L+
Sbjct: 111 ALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVLL 170
Query: 202 DA-CFEVNR-VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
A C + + D FR + +P++ YN ++ L + G L A F MV K
Sbjct: 171 KAQCSDAAADIKDALRLFRNIP----KPDVCSYNTIIDGLCRRGRLAAALEMFSEMVGKC 226
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
+ +Y ++ L+ G D+ L+I + G + G L K GR
Sbjct: 227 IAPTVVTYTTLIHWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDG-LCKGGRAASA 285
Query: 319 VKLMEKKEREK 329
++LM++ +EK
Sbjct: 286 LELMDRMIKEK 296
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 131/261 (50%), Gaps = 13/261 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V ++ L+ G+ + GD+ G L+ E++ + G+ D + + + + G
Sbjct: 549 MIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEAR--GICPDAIAFSAFIDGLSKA 606
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G+ EEA E ++E + + V + V N S++ LCN GK EALKL M+ K L
Sbjct: 607 GLVEEAYEAFSE-MSKKGFVPNNFVYN-SLIHGLCNCGKLHEALKLEREMRQ-----KGL 659
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + N++ +G+C +GR K A + F +M +PDT+++N LI CK + A+E
Sbjct: 660 LPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADE 719
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+M G +PD TY + + ++ T +++ G+ PN YN ++ V
Sbjct: 720 FLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNA-V 778
Query: 241 QVGMLDEAKSFFDIMVKKLKM 261
MLD A + K LKM
Sbjct: 779 CTDMLDRAMV---LTAKLLKM 796
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 139/282 (49%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + +Y+ LM G+ + D L+EE+++K G+ DG + L+ G + G E
Sbjct: 378 GLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDK--GIAPDGATFNILVAGNYKYGKEA 435
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
++ E + + +S V ++ + SV LC G+ DEA++ + M + PP +A
Sbjct: 436 DSYELFRDW-SLSSLVPDCSLYDVSV-AGLCWAGQLDEAMQFLEDMLEKGMPPSVVA--- 490
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
FN + Y G +A + ++ M + P + + ++++ L K G L EA +L +
Sbjct: 491 --FNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYK 548
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M DKG+ ++ + +L+D F+V + + +M G+ P+ ++ + L + G+
Sbjct: 549 MIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGL 608
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
++EA F M KK ++ Y ++ L + GKL E L++
Sbjct: 609 VEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKL 650
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 113/241 (46%), Gaps = 9/241 (3%)
Query: 86 ANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
A N +++A G+ +AL M KN P +L +F+ + +C +G +A
Sbjct: 315 AYNILINAYRIRGRTSDALGFLHLMIKNGCKP------SLITFSTIITAFCNEGNVVEAR 368
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
++F + E SP+ +N L+ K + +A LY EM DKG+ PD T+ +L+
Sbjct: 369 KIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGN 428
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
++ + D FR S L P+ ++Y+ V L G LDEA F + M++K +
Sbjct: 429 YKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSV 488
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
++ ++ A S G D + +L G + S + G LSK+GR +E L+
Sbjct: 489 VAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLG-LSKKGRLQEARDLLY 547
Query: 324 K 324
K
Sbjct: 548 K 548
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 109/285 (38%), Gaps = 43/285 (15%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
SD + +LM+G+ M E++E + V+ S+ A + + L G +
Sbjct: 206 SDFSILNTLMRGFMNSEMAYESLEILSRM--REVGVRPSSSAISILFRLLLRVGDYGSVW 263
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
KL M + P +FN+M +C +G + A + M ++ C PD ++N
Sbjct: 264 KLLRGMIRDGPRPCN-----HNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNI 318
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
LI+ G ++A M G P T+ ++ A V + F + + G
Sbjct: 319 LINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVG 378
Query: 225 LRPNLAVYNRLVG------KLVQVGML------------------------------DEA 248
L PN+A+YN L+ + Q ML D
Sbjct: 379 LSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSY 438
Query: 249 KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F D + L D + Y + L G+LDE ++ + +L+ G
Sbjct: 439 ELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKG 483
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 19/201 (9%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF----M 59
KG + D + ++ GF ++G F F E+ GV D V Y +L+ GY M
Sbjct: 657 KGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHI--GVTPDTVTYNTLIGGYCKVLDM 714
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+E + Y A G + + N + C++ K A+ + D + P
Sbjct: 715 VSADEFLNKMY--ASGWDPDI----TTYNIRIQGFCSSQKISRAVTMLDELIAVGVVP-- 766
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N ++N M + C A+ + K+ + P+ ++ N L+ CK GM E
Sbjct: 767 ---NTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGM-PEKA 821
Query: 180 ELYGEMSDKGVNPDEYTYGLL 200
++G+ +K + D Y L+
Sbjct: 822 LIWGQKLNKLLRADFIGYWLV 842
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 147/291 (50%), Gaps = 16/291 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + V+Y+ ++ F R+G +D ++ E+++E+ G+V D V + S + +G
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREE--GLVPDIVTFNSRISALCKEGKVL 269
Query: 65 EAMECY-----NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+A + +E +G + +++ N +L C G ++A LF+ ++ +
Sbjct: 270 DASRIFSDMELDEYLG---LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD---- 322
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+L S+N+ G G+F +A V ++M + P S+N L+D LCK GML++A+
Sbjct: 323 -LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ G M GV PD TYG L+ V +VD + ++M+ + PN N L+ L
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
++G + EA+ M +K +D + ++ L G+LD+ +EIV G+
Sbjct: 442 WKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 5/209 (2%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
+ +++L+ LC G+F EA LF M E P +A +N+ +C QG+ A
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVA-----YNIFIHHFCKQGKISSAF 579
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
V + M + C ++N+LI L + E L EM +KG++P+ TY +
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYL 639
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA 264
E +V+D +M+ + PN+ + L+ +V D A+ F+ V +
Sbjct: 640 CEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEG 699
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDG 293
Y M L G+L + E++ +LD G
Sbjct: 700 LYSLMFNELLAAGQLLKATELLEAVLDRG 728
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 9/251 (3%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGEN-SSVKMSAVANNS 89
R+F E+ G+ D ++ + M EE E +N + + K+S++ S
Sbjct: 25 RIFSSPSEESHGISLDAT--PTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLL--S 80
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
V+ + D+A F +++ P + +V L +N++ + + R + +++
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLVRSRF-PENKPSVYL--YNLLLESCIKERRVEFVSWLYKD 137
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M +P T +FN LI LC + + A EL+ EM +KG P+E+T+G+L+ +
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
D G M G+ PN +YN +V + G D+++ + M ++ L D ++
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Query: 269 MMKALSDGGKL 279
+ AL GK+
Sbjct: 258 RISALCKEGKV 268
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 26/277 (9%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ + G VR G + +++ +K G+ Y LM G GM +A
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDK--GIGPSIYSYNILMDGLCKLGMLSDA----KT 382
Query: 73 AVG--ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
VG + + V AV +L C+ GK D A L M + P N + N++
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP-----NAYTCNIL 437
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
GR +A E+ RKM E DT++ N ++D LC +G L +A E+ M G
Sbjct: 438 LHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG- 496
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
G L ++ + VDD ++++ P+L Y+ L+ L + G EAK+
Sbjct: 497 ---SAALGNLGNS--YIGLVDDS------LIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545
Query: 251 FF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
F ++M +KL+ D +Y + GK+ ++
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 10/249 (4%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V Y+ + F + G FR+ +++++K G Y SL+ G +K E
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK--GCHKSLETYNSLILGLGIKNQIFEIH 614
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+E + + + N+ + LC K ++A L D M K +A N+ SF
Sbjct: 615 GLMDEM--KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQ-----KNIAPNVFSF 667
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ + +C F A EVF C ++ + ++L G L +A EL + D
Sbjct: 668 KYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLD 726
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G + Y L+++ + + ++ + KM+D G + A ++ L ++G E
Sbjct: 727 RGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKE 786
Query: 248 AKSFFDIMV 256
A SF D M+
Sbjct: 787 ANSFADKMM 795
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P Y Y LL+++C + RV+ + ++ MV G+ P +N L+ L +D A+
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELS 310
FD M +K K ++ ++ +++ G D+ LE++ ++ G+ ++ + +
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNA-MESFGVLPNKVIYNTIVSSFC 228
Query: 311 KEGREEEVVKLMEKKERE 328
+EGR ++ K++EK E
Sbjct: 229 REGRNDDSEKMVEKMREE 246
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 119 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 176
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 177 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDDANELFDEML-----VKGLVPNG 229
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCK G L +A L E
Sbjct: 230 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDE 289
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD++TY L+D C + +D + ++M+ +R + Y ++ L Q G
Sbjct: 290 MSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGR 349
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 350 PVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 383
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V +GV + +L+ G+
Sbjct: 185 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLVPNGVTFTTLIDGHCKN 242
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G ++A L D M + P +
Sbjct: 243 GRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKF 300
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ +I LC+ G +AE+
Sbjct: 301 -----TYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEK 355
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M +G P++ YN L+
Sbjct: 356 MLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLM 411
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 94/240 (39%), Gaps = 15/240 (6%)
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------NLGSFNVMADGYC 135
+++ LC + F EA L + + AV ++ F+ + Y
Sbjct: 6 TMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 65
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
G +DAIE +R E++ + +++ L K Y E+ + G Y
Sbjct: 66 ESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLY 125
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+ +LM + + + F + GLRP++ YN L+ +++G LDE M
Sbjct: 126 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 185
Query: 256 VKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
+ ++ D +Y ++ L K+D+ E+ +L G + + G K GR
Sbjct: 186 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH-CKNGR 244
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 153/324 (47%), Gaps = 11/324 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ GF ++GDSD + + E+ ++ + D V Y S++ +
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR--RISPDVVTYSSIIAALCKGQAMD 248
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+AME V + V + + NS+L C++ + EA+ +M+++ P ++
Sbjct: 249 KAMEVLTTMV--KNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEP-----DV 301
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + D C GR +A ++F M + PD ++ L+ G L E L
Sbjct: 302 VTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDL 361
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G++PD + + +L+ A + +VD+ F KM GL PN+ Y ++G L + G
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+D+A +F+ M+ + L + Y ++ +L K D+ E++ +LD GI +
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR-GICLNTIFFN 480
Query: 304 FVKGELSKEGREEEVVKLMEKKER 327
+ KEGR E KL + R
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVR 504
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 150/319 (47%), Gaps = 13/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V++ L+ + + D +F ++++ G+ + V YG+++
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQH--GLNPNVVTYGAVIGILCKS 419
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++AM + + + E + + + S++ +LC K+D+A +L M + + +
Sbjct: 420 GSVDDAMLYFEQMIDEGLTPNI--IVYTSLIHSLCIFDKWDKAEELILEMLD-----RGI 472
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N FN + +C +GR ++ ++F M P+ ++++ LID C G + EA +
Sbjct: 473 CLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATK 532
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G+ PD TY L++ V+R+DD F++MV SG+ PN+ YN ++ L
Sbjct: 533 LLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 592
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI-LDDGGIEFS 298
AK + + K +++ ++Y ++ L DE L + + L D ++
Sbjct: 593 HTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--LQLE 650
Query: 299 EELQEFVKGELSKEGREEE 317
+ G L K GR +E
Sbjct: 651 TRTFNIMIGALLKVGRNDE 669
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 151/319 (47%), Gaps = 15/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + +VY+ L+ D L E+ ++ G+ + + + S++ + +
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR--GICLNTIFFNSIIHSHCKE 489
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+ + ++ V VK + + ++++D C GK DEA KL M + P
Sbjct: 490 GRVIESEKLFDLMV--RIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP--- 544
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++N + +GYC R DA+ +F++M SP+ +++N ++ L A A+E
Sbjct: 545 --DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY ++ G + TY +++ + N D+ F+ + + L+ +N ++G L+
Sbjct: 603 LYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 662
Query: 241 QVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+VG DEAK F + L D +Y M + L + G L+E+ ++ + ++G S
Sbjct: 663 KVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSR 722
Query: 300 ELQEFV-----KGELSKEG 313
L V +G++++ G
Sbjct: 723 MLNSIVRKLLQRGDITRAG 741
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 129/293 (44%), Gaps = 44/293 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G + + ++ ++ ++G +S+ +F L + GV + + Y +L+ GY
Sbjct: 467 MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI-----GVKPNVITYSTLIDGY 521
Query: 58 FMKGMEEEAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
+ G +EA + + +VG +K V N++++ C + D+AL LF M +
Sbjct: 522 CLAGKMDEATKLLSSMFSVG----MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGV 577
Query: 116 PPKRLAVN------------------------------LGSFNVMADGYCGQGRFKDAIE 145
P + N L ++N++ G C +A+
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+F+ + +T +FN +I L K G EA++L+ +S G+ PD TY L+ +
Sbjct: 638 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 697
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
E +++ F M ++G N + N +V KL+Q G + A ++ ++ +K
Sbjct: 698 EQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEK 750
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 6/211 (2%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G C R DA++ V R+M E C PD S L+ LC EA EL
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHM 183
Query: 185 MSDK---GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M+D G PD +Y +++ F+ D + + +M+D + P++ Y+ ++ L +
Sbjct: 184 MADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCK 243
Query: 242 VGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+D+A MVK M + +Y ++ + E + + + D G+E
Sbjct: 244 GQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSD-GVEPDVV 302
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKAE 331
+ L K GR E K+ + + E
Sbjct: 303 TYNSLMDYLCKNGRSTEARKIFDSMTKRGLE 333
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 11/127 (8%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V P +TYG+L+ C R+D G +V G R +
Sbjct: 66 AAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITF 125
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLK----MDDA-SYKFMMKALSDGGKLDEILEIVG 287
L+ L +A DI+++++ M D S ++K L D + E LE++
Sbjct: 126 TPLLKGLCADKRTSDA---MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLH 182
Query: 288 GILDDGG 294
+ DD G
Sbjct: 183 MMADDRG 189
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 151/327 (46%), Gaps = 41/327 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF KG V Y+ L+ GF+R GDS FR+ EE+ + GV + Y +L+KG
Sbjct: 332 MFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLAR--GVKLNLFTYNALVKGVCKF 389
Query: 61 GMEEEAMECYNEAVG---------------------------------ENSSVKMSAVAN 87
G E+A NE + + S++ +A
Sbjct: 390 GDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTC 449
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ LC +G ++A ++F+ M + P N + + G+ +GRF++A+ +
Sbjct: 450 GMIINGLCRHGSIEDASRVFEIMVSLGVKP-----NAVIYTTLIKGHVQEGRFQEAVRIL 504
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ M + PD L +N++I LCK+ + EA++ EM ++G+ P+ YTYG L+ +
Sbjct: 505 KVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKS 564
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASY 266
+ YF++M+ G+ PN V L+ + G EA S F M+ + + D +Y
Sbjct: 565 GEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTY 624
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDG 293
++ L GKL +E++ L+ G
Sbjct: 625 SALIHGLLRNGKLQGAMELLSEFLEKG 651
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 149/328 (45%), Gaps = 20/328 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D YS L+ G +R+G G L E EK G+V D Y S++ G+ +
Sbjct: 612 MLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEK--GLVPDVFTYNSIISGFCKQ 669
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + + + S + + N++++ LC G+ + A +LFD + P K L
Sbjct: 670 GGIGKAFQLHEYMCQKGISPNI--ITYNALINGLCKAGEIERARELFDGI-----PGKGL 722
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A N ++ + DGYC G A +F +M PD+ ++ LID K G +A
Sbjct: 723 AHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALS 782
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ E KG + LMD + +V + MVD ++P+ Y L+
Sbjct: 783 LFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHC 841
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEIL----EIVGGILDDGGI 295
+ G L EA+ FF M K+ M +A +Y ++ + G+ E+ E++ ++ G+
Sbjct: 842 KTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGV 901
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLME 323
+S + + KEG + +KL++
Sbjct: 902 TWSVMIDAHL-----KEGDHVKTLKLVD 924
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 149/355 (41%), Gaps = 70/355 (19%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V D Y+ ++ GF + G F+L E + +K G+ + + Y +L+ G G
Sbjct: 650 KGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQK--GISPNIITYNALINGLCKAGEI 707
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------ 117
E A E ++ G+ + +AV +++D C +G +A +LFD M + PP
Sbjct: 708 ERARELFDGIPGK--GLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYS 765
Query: 118 -------------KRLAVNL----------GSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
K L++ L S N + DG+C G+ +A ++ M +
Sbjct: 766 ALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKH 825
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
PD +++ LID CK G L EAE+ + +M + + P+ TY L+
Sbjct: 826 VKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSG----------- 874
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
YN G E + FD M+ K ++ D ++ M+ A
Sbjct: 875 -----------------YN-------MAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAH 910
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
G + L++V +L GG S+ + + L ++ EV+K++EK E +
Sbjct: 911 LKEGDHVKTLKLVDDMLKKGG-NVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQ 964
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 126/309 (40%), Gaps = 37/309 (11%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P Y+ M+ G R G + R+FE + GV + V+Y +L+KG+ +G +EA+
Sbjct: 444 PTAYTCGMIINGLCRHGSIEDASRVFEIMVSL--GVKPNAVIYTTLIKGHVQEGRFQEAV 501
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR-------- 119
V + V+ + NSV+ LC + K +EA M P
Sbjct: 502 RILK--VMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIH 559
Query: 120 ----------------------LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
+A N + DGYC +G +A +FR M P
Sbjct: 560 GYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHP 619
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
D +++ LI L +NG L A EL E +KG+ PD +TY ++ + +
Sbjct: 620 DVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLH 679
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDG 276
M G+ PN+ YN L+ L + G ++ A+ FD I K L + +Y ++
Sbjct: 680 EYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKS 739
Query: 277 GKLDEILEI 285
G L + +
Sbjct: 740 GNLSKAFRL 748
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 13/285 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGMEEEA 66
P VY+Y L+ G+ + G+ R F KE LG G+ + VV +L+ GY +G EA
Sbjct: 549 PNVYTYGALIHGYCKSGEMQVADRYF---KEMLGCGIAPNDVVCTALIDGYCKEGSTTEA 605
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ +G SV ++++ L NGK A++L K L ++ +
Sbjct: 606 TSIFRCMLGR--SVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLE-----KGLVPDVFT 658
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + G+C QG A ++ M + SP+ +++N LI+ LCK G + A EL+ +
Sbjct: 659 YNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIP 718
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
KG+ + TY ++D + + F +M G+ P+ VY+ L+ + G +
Sbjct: 719 GKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTE 778
Query: 247 EAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
+A S F V+K +S +M GK+ E +++ ++D
Sbjct: 779 KALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVD 823
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 35/292 (11%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ ++ G+ + G+ FRLF+E+ L GV D VY +L+ G +G
Sbjct: 720 KGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMT--LKGVPPDSFVYSALIDGCRKEGNT 777
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------ 117
E+A+ + E+V + + S + N+++D C +GK EA +L + M ++H P
Sbjct: 778 EKALSLFLESVQKGFA---STSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYT 834
Query: 118 ------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
+ L N ++ + GY GR + +F +M
Sbjct: 835 ILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAK 894
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
PD ++++ +ID K G + +L +M KG N + +L+D V +
Sbjct: 895 DIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEV 954
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS 265
K+ + GL +LA + LV + G +D A MV+ + D++
Sbjct: 955 LKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDST 1006
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 22/243 (9%)
Query: 47 GVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK- 105
GVV+ L+ GY KG+ +EA+ S + A N V+ LC NG + LK
Sbjct: 166 GVVFELLIDGYKKKGLFDEAV-----------SFFLGAKRNGFVVGLLCCNGLLSDLLKA 214
Query: 106 ----LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
LF R N L ++ ++ + + + G K+ + +M E CSP ++
Sbjct: 215 NKLELFWRFYNGMLEANVLH-DVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVT 273
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+N +I LC+ G + EA EL M KG+ D +TY +L+D + R + +M
Sbjct: 274 YNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMF 333
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF---DIMVKKLKMDDASYKFMMKALSDGGK 278
GL+P Y L+ ++ G D ++F +++ + +K++ +Y ++K + G
Sbjct: 334 SKGLKPGHVAYTALIDGFMRQG--DSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGD 391
Query: 279 LDE 281
+++
Sbjct: 392 MEK 394
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 132/348 (37%), Gaps = 80/348 (22%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV + + L+ ++ + +R + + E V+ D Y L+ +F G +
Sbjct: 196 GFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLE--ANVLHDVYTYTHLINAHFRAGNAK 253
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E E E S V N V+ LC G+ DEA +L M K L ++
Sbjct: 254 EGKRLLFEM--EEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDK-----KGLVADV 306
Query: 125 GSFNVMADGYCGQGRFKDA----------------------IEVFRKMGE----YRCSPD 158
+++++ DG+ Q R +A I+ F + G+ +R +
Sbjct: 307 FTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEE 366
Query: 159 TL---------SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY------------ 197
L ++N L+ +CK G + +A+ L EM G+ PD TY
Sbjct: 367 MLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQN 426
Query: 198 -----------------------GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
G++++ ++D + F MV G++PN +Y
Sbjct: 427 TSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTT 486
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
L+ VQ G EA +M KK ++ D Y ++ L K++E
Sbjct: 487 LIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEE 534
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+ + + + Y+ L+ G+ G +F LF+E+ K + DGV + ++ + +G
Sbjct: 859 RNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAK--DIEPDGVTWSVMIDAHLKEGDH 916
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ ++ ++ + + +V + + ++D LC E LK+ ++++ + L ++
Sbjct: 917 VKTLKLVDDMLKKGGNVSKNVC--HVLIDPLCRKEHVSEVLKVLEKIEEQG-----LNLS 969
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
L + + + + G+ A V + M ++ PD+ N+LI+
Sbjct: 970 LATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLIN 1013
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 133/282 (47%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D ++ L+ G +G LF+++ + G D V YG+L+ G G
Sbjct: 126 GHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGE--GFRPDVVTYGTLINGLCKVGNTS 183
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ V +N + + A N+++D+LC + + EA LF M K ++ ++
Sbjct: 184 AAIRLLGSMVQKNC--QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVT-----KGISPDI 236
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + C +K + +M + + PD +SFN ++D LCK G + EA ++ +
Sbjct: 237 FTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDK 296
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +GV P+ TY LMD ++ +D+ F MV G PN+ YN L+ ++
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 356
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+D+A F M ++ L D +Y ++ L +L + + +
Sbjct: 357 IDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 398
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 118/267 (44%), Gaps = 21/267 (7%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
P V++Y ++ +D F LF E+ K G+ D Y SL+ +
Sbjct: 197 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK--GISPDIFTYNSLIHALCNLCEWKH 254
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
NE V +S + V+ N+V+DALC GK EA + D+M P N+
Sbjct: 255 VATLLNEMV--DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP-----NVV 307
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ + DG+C +A++VF M C P+ +S+N LI+ CK + +A L+GEM
Sbjct: 308 TYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 367
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ + PD TY L+ V R+ D F +MV PNL Y L+ L + L
Sbjct: 368 CRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYL 427
Query: 246 DEAKSFF----------DIMVKKLKMD 262
EA + DI V + +D
Sbjct: 428 AEAMALLKAIEGSNLDPDIQVNNIAID 454
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 7/211 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
GV + V Y +LM G+ + +EA++ ++ V + + ++ N++++ C + D
Sbjct: 301 GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP--NVISYNTLINGYCKIQRID 358
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A+ LF M + P + +++ + G C R +DAI +F +M P+ ++
Sbjct: 359 KAMYLFGEMCRQELIPDTV-----TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 413
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ L+D LCKN LAEA L + ++PD + +D ++ F +
Sbjct: 414 YRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLS 473
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
GL+P++ Y+ ++ L + G+LDEA F
Sbjct: 474 SKGLQPDVWTYSIMINGLCRRGLLDEASKLF 504
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 11/255 (4%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S V N +L ++ L L +M + PP N+ + +++ + +C R
Sbjct: 60 STVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPP-----NIYTLHILINSFCHLNRVGF 114
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A V K+ + PDT +F LI + G + EA L+ +M +G PD TYG L++
Sbjct: 115 AFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLIN 174
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+V MV +PN+ YN ++ L + + EA + F MV K +
Sbjct: 175 GLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISP 234
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKGELSKEGREEEVV 319
D +Y ++ AL + + + ++ ++D + ++ F V L KEG+ E
Sbjct: 235 DIFTYNSLIHALCNLCEWKHVATLLNEMVDS---KIMPDVVSFNTVVDALCKEGKVTEAH 291
Query: 320 KLMEKKEREKAEAKA 334
+++K + E
Sbjct: 292 DVVDKMIQRGVEPNV 306
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
AI F +M + P T+ FN L+ + K + L +M G+ P+ YT +L++
Sbjct: 45 AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKM 261
+ +NRV + K++ G +P+ A + L+ + G + EA FD M+ + +
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRP 164
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGIL 290
D +Y ++ L G + ++G ++
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMV 193
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D Y+ + G+ + G R+F+E+ + GVV + V Y SL+ G
Sbjct: 320 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCRE--GVVPNIVTYNSLIDCLCKAGEVS 377
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A E S + V +LD LC + + D+A+ LF+++ P ++
Sbjct: 378 GAWEIVKTM--HRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTP-----DV 430
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S+ ++ G C R +A+ + R M P ++++ LID LC++G ++ A L E
Sbjct: 431 WSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNE 490
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG PD TY +L+DA ++ +D+ F +M+ GL P++ Y ++ +
Sbjct: 491 MHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSER 550
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGG 277
+DEA + F ++ +K L D +Y + A+ G
Sbjct: 551 IDEAINLFREMHMKNLVPDIVTYTILFNAVFKSG 584
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 161/367 (43%), Gaps = 59/367 (16%)
Query: 2 FVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
FVKG V V+YS ++ R+G D F + E+ GV + YGSL++G G
Sbjct: 180 FVKGNV---VMYSIVIDCLCRNGFVDEGFEFYNEMMGN--GVCPNEFTYGSLIRGLCGVG 234
Query: 62 MEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
E +E + G + SV + V ++D LC NG EA ++FD M N P
Sbjct: 235 KFLEGFGLVDEMIRRGLDVSVYVFTV----LIDGLCKNGMLVEAREMFDEMVNRGYEPNI 290
Query: 120 LAV------------------------------NLGSFNVMADGYCGQGRFKDAIEVFRK 149
+ ++ ++NV GYC GR +DA+ VF +
Sbjct: 291 VTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDE 350
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M P+ +++N+LID LCK G ++ A E+ M G+ PD T +L+D + R
Sbjct: 351 MCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKR 410
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKF 268
+D F ++V+SGL P++ Y L+ + EA + D+ +K L +Y
Sbjct: 411 LDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSC 470
Query: 269 MMKALSDGGKLDEILEI-----VGGILDDGGIEFS---------EELQE--FVKGELSKE 312
++ L G++ + V G L D I +S + L E F+ ++ K
Sbjct: 471 LIDGLCRSGRISNAWRLLNEMHVKGPLPD-TITYSILLDALWKKQHLDEAVFLFNQMIKR 529
Query: 313 GREEEVV 319
G E +V+
Sbjct: 530 GLEPDVM 536
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 15/256 (5%)
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
+ VA N+VL LC NG +AL+ D + N ++N S+ ++ +G C GR
Sbjct: 105 LDTVALNTVLKGLCVNGGVLKALEFHDEIVNN-----GFSLNEVSYGILINGLCENGRVN 159
Query: 142 DAIEVFRKMGE--------YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD 193
+A+ + R + + + + + ++ +ID LC+NG + E E Y EM GV P+
Sbjct: 160 EAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPN 219
Query: 194 EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
E+TYG L+ V + +G +M+ GL ++ V+ L+ L + GML EA+ FD
Sbjct: 220 EFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFD 279
Query: 254 IMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE 312
MV + + + + +M G +D E+ I + G F+ G K
Sbjct: 280 EMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHG-YCKV 338
Query: 313 GREEEVVKLMEKKERE 328
GR + V++ ++ RE
Sbjct: 339 GRVRDAVRVFDEMCRE 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 129/351 (36%), Gaps = 84/351 (23%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
F G F +F ++ ++ G+ D V +++KG + G +A+E ++E V S
Sbjct: 82 FFHLGHVSFSFSIFGKILKRGYGL--DTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFS 139
Query: 80 -----------------------------------------VKMSAVANNSVLDALCNNG 98
VK + V + V+D LC NG
Sbjct: 140 LNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNG 199
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
DE + ++ M P ++ + G CG G+F + + +M
Sbjct: 200 FVDEGFEFYNEMMGNGVCPNEF-----TYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVS 254
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP-------------------------- 192
F LID LCKNGML EA E++ EM ++G P
Sbjct: 255 VYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFD 314
Query: 193 ---------DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
D +TY + + +V RV D F +M G+ PN+ YN L+ L + G
Sbjct: 315 AIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAG 374
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ A M + L D + ++ L +LD+ + + +++ G
Sbjct: 375 EVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG 425
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 116/253 (45%), Gaps = 18/253 (7%)
Query: 77 NSSVKMSAVAN-NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
NS S++A+ N L L + A+ LF+ +NE+N + + + +
Sbjct: 28 NSFHSHSSLAHFNKHLTCLMKTNQHSTAIALFN--QNEYNNFITPCIITLTIIITCFFHL 85
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
G F + +F K+ + DT++ N ++ LC NG + +A E + E+ + G + +E
Sbjct: 86 GHVSF--SFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEV 143
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSG--------LRPNLAVYNRLVGKLVQVGMLDE 247
+YG+L++ E RV++ R + ++ N+ +Y+ ++ L + G +DE
Sbjct: 144 SYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDE 203
Query: 248 AKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDE----ILEIVGGILDDGGIEFSEELQ 302
F++ +M + ++ +Y +++ L GK E + E++ LD F+ +
Sbjct: 204 GFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLID 263
Query: 303 EFVKGELSKEGRE 315
K + E RE
Sbjct: 264 GLCKNGMLVEARE 276
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +K V V YS L+ G R G +RL E+ K G + D + Y L+ + K
Sbjct: 456 MHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVK--GPLPDTITYSILLDALWKK 513
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
+EA+ +N+ + ++ + ++D C + + DEA+ LF M ++ P
Sbjct: 514 QHLDEAVFLFNQMI--KRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVP 568
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 137/290 (47%), Gaps = 8/290 (2%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V D + YS ++ DG S + ++ GG + VVY +++ G F +G
Sbjct: 169 GCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVG 228
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + ++E + V + V NSV+ ALC D+A + +M P +
Sbjct: 229 EACDLFHEMTQQG--VPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNV---- 282
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + GY G++K A+ +F++M P+T++ + + LCK+G + EA E +
Sbjct: 283 -TYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDS 341
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG + +Y L+ + D + F MV G+ PN V+N LV + GM
Sbjct: 342 MLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGM 401
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ EA F+ M K+ L D +Y ++ A G +D+ ++ ++D G
Sbjct: 402 VREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKG 451
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 144/319 (45%), Gaps = 19/319 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG-- 61
+G D + Y ++ F R G D F + +K GV + VY L++G+ G
Sbjct: 415 RGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDK--GVEPNFAVYQCLIQGFCTHGDL 472
Query: 62 --MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
EE E N+ +G ++ S+++ LC G+ EA ++FD + ++
Sbjct: 473 VKAEELVYEIRNKGLGP------CILSFASLINHLCKEGRVFEAQRIFDMIIRT---GEK 523
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
VN+ F + DGYC G+ +A V M PD +++ L++ CKNG + +
Sbjct: 524 ADVNI--FTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGL 581
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L+ E+ KGV P +TYG+++D F R F++M++SG+ + Y+ L+ L
Sbjct: 582 ILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGL 641
Query: 240 VQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ +EA + F + +K D M+ + + +E + I D G + +
Sbjct: 642 CRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVP-T 700
Query: 299 EELQEFVKGELSKEGREEE 317
+ + L KEG EE
Sbjct: 701 VQTYTIMMENLIKEGSVEE 719
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 124/260 (47%), Gaps = 9/260 (3%)
Query: 36 LKEKLG-GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL 94
L++ +G GV D V Y +L+ GY G ++A+ + E V + V ++ + L
Sbjct: 269 LRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRG--VIPNTVTCSTFVAFL 326
Query: 95 CNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
C +G+ +EA + FD M + + +N+ S++ + GY G D +F M
Sbjct: 327 CKHGRIEEAREFFDSMLAKGH-----KLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDG 381
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
P+ FN L++ K GM+ EA ++ +M +G+NPD TY ++ A + +DD
Sbjct: 382 IVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAM 441
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF-FDIMVKKLKMDDASYKFMMKAL 273
F M+D G+ PN AVY L+ G L +A+ ++I K L S+ ++ L
Sbjct: 442 DKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHL 501
Query: 274 SDGGKLDEILEIVGGILDDG 293
G++ E I I+ G
Sbjct: 502 CKEGRVFEAQRIFDMIIRTG 521
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 144/330 (43%), Gaps = 40/330 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G+ G R+F+E+ + GV+ + V + + G E
Sbjct: 276 GVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSR--GVIPNTVTCSTFVAFLCKHGRIE 333
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA E ++ + + K++ ++ +++L G + LF+ M + P N
Sbjct: 334 EAREFFDSMLAKGH--KLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVP-----NQ 386
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
FN++ +GY G ++A+ +F M + +PD L++ +I C+ G + +A + +
Sbjct: 387 HVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNH 446
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M DKGV P+ Y L+ + ++ + GL P + + L+ L + G
Sbjct: 447 MIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGR 506
Query: 245 LDEAKSFFDIMVKKLKMDDASYKFMMKALSDG----GKLDEILEI------VG------- 287
+ EA+ FD++++ + D + + +L DG GK+ E + VG
Sbjct: 507 VFEAQRIFDMIIRTGEKADVN---IFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVT 563
Query: 288 -----------GILDDGGIEFSEELQEFVK 306
G +DDG I F E L + VK
Sbjct: 564 YGTLVNGCCKNGRIDDGLILFRELLHKGVK 593
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 131/280 (46%), Gaps = 10/280 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
AD +++ L+ G+ G FR+ + + G+ D V YG+L+ G G ++ +
Sbjct: 524 ADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSV--GIEPDIVTYGTLVNGCCKNGRIDDGL 581
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E + + VK + +LD L + G+ A ++F M +AV + ++
Sbjct: 582 ILFRELL--HKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIES-----GIAVTIPTY 634
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+++ G C ++AI VF+K+ D + N +I ++ K EAE L+ + D
Sbjct: 635 SILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPD 694
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G+ P TY ++M+ + V++ F M+ SGL P N +V L++ G + +
Sbjct: 695 YGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVK 754
Query: 248 AKSFFDIMVKKLKMDDASYKFMMKAL-SDGGKLDEILEIV 286
A + + K + +AS M+ +L S GK E L ++
Sbjct: 755 AGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNLL 794
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 13/185 (7%)
Query: 176 AEAEELYGEMSD----KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
A A L+ MS + P YTY +L+D C R+D +F ++ G++ ++ V
Sbjct: 81 ALAVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIV 140
Query: 232 YNRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASYKFMMKALSDGGKLDEILEIV 286
+ L+ L DEA D++ ++ D SY ++K++ D G+ L+I+
Sbjct: 141 VSSLLRGLCDAKRTDEA---VDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDIL 197
Query: 287 G-GILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKR 345
+ GG + + V L KEG+ E L + ++ + A
Sbjct: 198 RMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALC 257
Query: 346 SARAA 350
ARA
Sbjct: 258 KARAV 262
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 128/282 (45%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G DP ++ L+ G +G LF+++ ++ G + V YG+L+ G G
Sbjct: 121 GHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE--GFQPNVVTYGTLINGLCKVGNTS 178
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ E + + V S++D+LC + + EA LF +M + P ++
Sbjct: 179 AAIRLLRSM--EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP-----DI 231
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + C +K + +M + PD + F+ ++D LCK G + EA E+
Sbjct: 232 FTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDM 291
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +GV PD TY LMD + +D+ F MV G P++ Y L+ ++
Sbjct: 292 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 351
Query: 245 LDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEI 285
+D+A F+ M +K + D +Y +M L G+L + + +
Sbjct: 352 IDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIAL 393
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 135/290 (46%), Gaps = 10/290 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF + V Y L+ G + G++ RL +++ G D V+Y S++
Sbjct: 152 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ--GNCQPDVVIYTSIIDSLCKD 209
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA +++ VG+ S + S++ ALCN ++ L ++M N P
Sbjct: 210 RQVTEAFNLFSQMVGQGISPDI--FTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP--- 264
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ F+ + D C +G+ +A E+ M + PD +++ L+D C + EA +
Sbjct: 265 --DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 322
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M KG PD +Y L++ +++++D F +M P+ YN L+ L
Sbjct: 323 VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLC 382
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGI 289
VG L +A + F MV + +M D +Y ++ +L L+E + ++ I
Sbjct: 383 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAI 432
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 123/247 (49%), Gaps = 9/247 (3%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+ D V++S ++ ++G + + + ++ GV D V Y +LM G+ ++ +E
Sbjct: 262 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR--GVEPDVVTYTTLMDGHCLQSEMDE 319
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A++ ++ V + + + ++ ++++ C K D+A+ LF+ M + P +
Sbjct: 320 AVKVFDMMVRKGFAPDV--ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIP-----DTK 372
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + G C GR +DAI +F +M PD ++++ L+D LCKN L EA L +
Sbjct: 373 TYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAI 432
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+NPD Y +++D ++ F + GL P++ YN ++ L + G+L
Sbjct: 433 EASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLL 492
Query: 246 DEAKSFF 252
+EA F
Sbjct: 493 NEANKLF 499
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 131/282 (46%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ L+ + V L ++ ++ D V++ +++ +
Sbjct: 222 MVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVN--SKILPDVVIFSTVVDALCKE 279
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA E + + V+ V +++D C + DEA+K+FD M K
Sbjct: 280 GKVTEAHEIVDMMI--QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR-----KGF 332
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A ++ S+ + +GYC + A+ +F +M PDT ++N L+ LC G L +A
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM +G PD TY +L+D+ + +++ + + S L P++ VYN ++ +
Sbjct: 393 LFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 452
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ G L+ A+ F ++ K L +Y M+ L G L+E
Sbjct: 453 RAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNE 494
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 153/338 (45%), Gaps = 41/338 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ LM G + D ++F+ + K G D + Y +L+ GY
Sbjct: 292 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK--GFAPDVISYTTLINGYCKI 349
Query: 61 GMEEEAME-----CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
++AM C E + + + N+++ LC+ G+ +A+ LF M
Sbjct: 350 HKIDKAMYLFEEMCRKEWIPDTKTY-------NTLMHGLCHVGRLQDAIALFHEMVARGQ 402
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P +L +++++ D C ++A+ + + + +PD +N +ID +C+ G L
Sbjct: 403 MP-----DLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGEL 457
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
A +L+ +S KG++P +TY +++ + +++ F +M + P+ YN +
Sbjct: 458 EAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTI 517
Query: 236 VGKLVQ-------VGMLDE--AKSF------FDIMVKKLK---MDDASYKFMMKALSDGG 277
+Q + +L+E A+ F ++V+ L +D +S M+ LS+
Sbjct: 518 ARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFLMLSVLSEDD 577
Query: 278 KLDEILEIVGGILDDGGIEFSE-ELQEFVK-GELSKEG 313
+ I G D G EF +L+E K GE+SK G
Sbjct: 578 RRYFIFIPEG--FDLLGWEFMRCKLKELAKIGEVSKSG 613
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 110/265 (41%), Gaps = 45/265 (16%)
Query: 100 FDEALKLFDRMKNEHNPPK---------------------RLAVNLGSF---------NV 129
D+AL F+R+ + H PP L+ + SF N+
Sbjct: 37 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ + +C R A V K+ + PD +F LI LC G + EA L+ +M D+G
Sbjct: 97 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
P+ TYG L++ +V R M +P++ +Y ++ L + + EA
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216
Query: 250 SFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIV-----GGILDDGGIEFSEELQE 303
+ F MV + + D +Y ++ AL + + + ++ IL D I FS
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI-FST---- 271
Query: 304 FVKGELSKEGR---EEEVVKLMEKK 325
V L KEG+ E+V +M ++
Sbjct: 272 -VVDALCKEGKVTEAHEIVDMMIQR 295
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 142/299 (47%), Gaps = 12/299 (4%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
VKG D ++ L+ + GD RLFEE+K G D V Y +L+ G
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS--GCTPDEVTYNTLIDNLCSLGK 441
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A++ + E++ S + N+++D LC + +EA ++FD+M + ++
Sbjct: 442 LGKALDLLKDM--ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG-----ISR 494
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +FN + DG C + DA E+ +M P+ +++N+++ CK G + +A ++
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M+ G D TYG L++ + R R M G+RP YN ++ L +
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSD-GGKLDEILEIVGGILDDGGI-EFS 298
+ +A S F M + + DA +YK + + L GG + E + + ++D G I EFS
Sbjct: 615 NNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 137/284 (48%), Gaps = 12/284 (4%)
Query: 9 DPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP V++Y ++ ++G + + ++ ++ G + D + +L+ EEA
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR--GCLPDITTFNTLIAALCTGNRLEEA 375
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
++ + + S + N +++ALC G AL+LF+ MKN P + +
Sbjct: 376 LDLARQVTVKGVSPDVYTF--NILINALCKVGDPHLALRLFEEMKNSGCTPDEV-----T 428
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + D C G+ A+++ + M C T+++N +ID LCK + EAEE++ +M
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+G++ + T+ L+D + ++DD +M+ GL+PN YN ++ + G +
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
+A + M ++D +Y ++ L G+ L+++ G+
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 143/318 (44%), Gaps = 11/318 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V ++ LM R + EE+ + GV D + +LM+G+ +
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSR--GVAPDETTFTTLMQGFVEE 229
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A+ + S + V N +++ C G+ ++AL + + P ++
Sbjct: 230 GSIEAALRVKARMLEMGCSA--TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N +G C A++V M + PD ++N +++ LCKNG L EA+
Sbjct: 288 -----TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKG 342
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +M D+G PD T+ L+ A NR+++ R++ G+ P++ +N L+ L
Sbjct: 343 ILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALC 402
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+VG A F+ M D+ +Y ++ L GKL + L+++ + G +
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTI 462
Query: 300 ELQEFVKGELSKEGREEE 317
+ G L K+ R EE
Sbjct: 463 TYNTIIDG-LCKKMRIEE 479
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 14/276 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG--GVVSDGVVYGSLMKGYFMKGM 62
G AD VVY++L L + +G +L E + ++G G+ D V + +LMK
Sbjct: 141 GIQADTVVYNHL-LNVLVEGSK---MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQ 196
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
A+ E + V +++ G + AL++ RM ++ V
Sbjct: 197 VRTAVIMLEEM--SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N V+ +GYC GR +DA+ ++ PD +++N ++ LC+N + A ++
Sbjct: 255 N-----VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVM 309
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M +G +PD +TY ++++ + ++++ +MVD G P++ +N L+ L
Sbjct: 310 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369
Query: 243 GMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGG 277
L+EA + VK + D ++ ++ AL G
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 41/256 (16%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E VK+ V +S LD+ FD+A+ D + N+ P + + +N + +
Sbjct: 103 EGHQVKLGVV--HSFLDSYEGQQLFDDAV---DLILNQLQPLFGIQADTVVYNHLLNVLV 157
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+ K V+ +MG PD ++FN L+ LC+ + A + EMS +GV PDE
Sbjct: 158 EGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDET 217
Query: 196 TYGLLMDACFE-----------------------------------VNRVDDGATYFRKM 220
T+ LM E + RV+D Y ++
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKL 279
+ G P+ YN V L Q + A D+MV++ D +Y ++ L G+L
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337
Query: 280 DEILEIVGGILDDGGI 295
+E I+ ++D G +
Sbjct: 338 EEAKGILNQMVDRGCL 353
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 164/359 (45%), Gaps = 17/359 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVV-SDGVVYGSLMKGYFMKGMEEEAM 67
D + Y+ L+ G R+GD + E L+ G + D V + SL G+ M +E
Sbjct: 90 DVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF 149
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
Y + + S + V ++ +D C +G+ ALK F MK + P N+ +F
Sbjct: 150 -VYMGVMLKCCSP--NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSP-----NVVTF 201
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ DGYC G + A+ ++++M R S + +++ LID CK G + AEE+Y M +
Sbjct: 202 TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE 261
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
V P+ Y ++D F+ D+ + KM++ G+R ++ Y ++ L G L E
Sbjct: 262 DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKE 321
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A + M K L D + MM A G++ + + +++ G L +
Sbjct: 322 ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMID 381
Query: 307 GELSKEGR-EEEVVKLMEKKEREK-----AEAKAREAEAAEAAKRSARAAIASLIPSKF 359
G ++K G+ E +V +K + +A +E + E + ++ + A L+P KF
Sbjct: 382 G-IAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKF 439
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 133/301 (44%), Gaps = 42/301 (13%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ GF + G+ ++ + E V + +VY +++ G+F +G + AM+
Sbjct: 234 VTYTALIDGFCKKGEMQRAEEMYSRMVED--RVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + N +++ A ++ LC NGK EA ++ + M+ P ++ F M
Sbjct: 292 AKML--NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP-----DMVIFTTM 344
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN-------------------------- 164
+ Y GR K A+ ++ K+ E PD ++ +
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV 404
Query: 165 ----LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY-GLLMDACFEVNRVDDGATYFRK 219
LID LCK G E E L+ ++S+ G+ PD++ Y + C + N VD R
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTR- 463
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
MV GL +L Y L+ L G++ EA+ FD M+ + D A + +++A G
Sbjct: 464 MVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGN 523
Query: 279 L 279
+
Sbjct: 524 M 524
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 10/197 (5%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N + L N+ +LK + + P R SFN + C G+ K A ++
Sbjct: 25 NKHIHQLINSNCGILSLKFLAYLVSRGYTPHR-----SSFNSVVSFVCKLGQVKFAEDIV 79
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG---VNPDEYTYGLLMDAC 204
M + C PD +S+N+LID C+NG + A + + PD ++ L +
Sbjct: 80 HSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGF 139
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDD 263
++ +D+ Y M+ PN+ Y+ + + G L A KSF + L +
Sbjct: 140 SKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNV 198
Query: 264 ASYKFMMKALSDGGKLD 280
++ ++ G L+
Sbjct: 199 VTFTCLIDGYCKAGDLE 215
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 10/187 (5%)
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK-DAIEVFRKMGEYRCSPDTL 160
EAL+ R++ N P N + + + CG K A V R +P
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCN-KHIHQLINSNCGILSLKFLAYLVSRGY-----TPHRS 57
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
SFN+++ +CK G + AE++ M G PD +Y L+D + + +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 221 VDSG---LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
S +P++ +N L ++ MLDE + +M+K + +Y + G
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSG 177
Query: 278 KLDEILE 284
+L L+
Sbjct: 178 ELQLALK 184
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 44/183 (24%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
A+ V+Y+ L+ ++GD V RLF ++ E G+V D +Y S + G
Sbjct: 401 ANDVMYTVLIDALCKEGDFIEVERLFSKISE--AGLVPDKFMYTSWIAG----------- 447
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
LC G +A KL RM E L ++L ++
Sbjct: 448 --------------------------LCKQGNLVDAFKLKTRMVQEG-----LLLDLLAY 476
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ G +G +A +VF +M SPD+ F+ LI K G +A A +L +M
Sbjct: 477 TTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQR 536
Query: 188 KGV 190
+G+
Sbjct: 537 RGL 539
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 154/312 (49%), Gaps = 11/312 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG AD V Y L+LGF R + +L +E+ E LG ++ V G L+ G +G
Sbjct: 289 KGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVE-LGFSPTEAAVSG-LVDGLRKQGKI 346
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A E + VG V + N+++++LC G D+A L+ M + P +
Sbjct: 347 DDAYELVVK-VGRFGFVP-NLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGI--- 401
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++++ D +C GR AI F +M + ++N+LI+ CK G L+ AE L+
Sbjct: 402 --TYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFI 459
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM++KGV P T+ L+ + +V + KM+D+G+ PN+ + L+ L
Sbjct: 460 EMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTN 519
Query: 244 MLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+ EA FD +V +K+K + +Y +++ GK+D+ E++ + G + + +
Sbjct: 520 KMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYR 579
Query: 303 EFVKGELSKEGR 314
+ G L GR
Sbjct: 580 PLISG-LCSTGR 590
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 10/266 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V ++ L+ G ++ D F L +++ ++ G+ D V+Y S++ Y +
Sbjct: 636 MIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQ--GLRPDNVIYTSMIDTYSKE 693
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A EC++ V E + V ++++ LC G+ D A LF RM+ + PP
Sbjct: 694 GSFKKAFECWDLMVTEECFP--NVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPN-- 749
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ G F D +G K+AI + M + + +T++ N +I CK G EA +
Sbjct: 750 SITYGCF---LDNLTKEGNMKEAIGLHHAMLKGLLA-NTVTHNIIIRGFCKLGRFHEATK 805
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EM++ G+ PD TY L+ V + M++ GL P+L YN L+
Sbjct: 806 VLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCC 865
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASY 266
G LD+A D M+++ + D Y
Sbjct: 866 VNGELDKAFELRDDMLRRGIIPDNKY 891
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 135/300 (45%), Gaps = 13/300 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G+ RDG D F L E++ +K G+V D Y L+ G G +A +
Sbjct: 541 VTYNVLIEGYCRDGKIDKAFELLEDMHQK--GLVPDTYTYRPLISGLCSTGRVSKAKDFI 598
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
++ +N VK++ + +++L C G+ EAL M + + ++L V+
Sbjct: 599 DDLHKQN--VKLNEMCYSALLHGYCQEGRLMEALSASCEMIQ-----RGINMDLVCHAVL 651
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DG Q K ++ + M + PD + + ++ID K G +A E + M +
Sbjct: 652 IDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEEC 711
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ TY LM+ + +D F++M + + PN Y + L + G + EA
Sbjct: 712 FPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIG 771
Query: 251 FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVK 306
M+K L + ++ +++ G+ E +++ + ++G + +S + E+ +
Sbjct: 772 LHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCR 831
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 12/231 (5%)
Query: 33 FEELKEKLGGVVSDG-----VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
F KEK+ + ++G V Y L+ G EA+E G+ + V
Sbjct: 241 FLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGK--GLAADVVTY 298
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ C +F+ ++L D M P AV+ + DG QG+ DA E+
Sbjct: 299 CTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVS-----GLVDGLRKQGKIDDAYELV 353
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
K+G + P+ +N LI+ LCK G L +AE LY MS + P+ TY +L+D+
Sbjct: 354 VKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRS 413
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
R+D +YF +M+ G+ + YN L+ + G L A+S F M K
Sbjct: 414 GRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ YS L+ F R G D F+ + + G+ Y SL+ G G A +
Sbjct: 401 ITYSILIDSFCRSGRLDVAISYFDRMIQD--GIGETVYAYNSLINGQCKFGDLSAAESLF 458
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E N V+ +A S++ C + + +A KL+++M + P N+ +F +
Sbjct: 459 IEMT--NKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITP-----NVYTFTAL 511
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C + +A E+F ++ E + P +++N LI+ C++G + +A EL +M KG+
Sbjct: 512 ISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGL 571
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD YTY L+ RV + + ++ N Y+ L+ Q G L EA S
Sbjct: 572 VPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALS 631
Query: 251 FFDIMVKK-LKMDDASYKFMM 270
M+++ + MD + ++
Sbjct: 632 ASCEMIQRGINMDLVCHAVLI 652
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 96/257 (37%), Gaps = 41/257 (15%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++L+ L KF +LFD N P + + C F A E
Sbjct: 194 SALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCS-----AVVRSMCELKDFLRAKEKI 248
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL-------- 199
R M +++N LI LCK ++EA E+ + KG+ D TY
Sbjct: 249 RWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRL 308
Query: 200 --------LMDACFEV-------------------NRVDDGATYFRKMVDSGLRPNLAVY 232
LMD E+ ++DD K+ G PNL VY
Sbjct: 309 QQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVY 368
Query: 233 NRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
N L+ L + G LD+A+ + M + L+ + +Y ++ + G+LD + ++
Sbjct: 369 NALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQ 428
Query: 292 DGGIEFSEELQEFVKGE 308
DG E + G+
Sbjct: 429 DGIGETVYAYNSLINGQ 445
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 76/188 (40%), Gaps = 14/188 (7%)
Query: 74 VGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-------------RL 120
+G + ++ S + ++ AL ++ F A L + + PK +
Sbjct: 93 LGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVFSHFLDSYKRCKF 152
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ LG FN++ Y R DA+ + + M P+ + + L++ L K E
Sbjct: 153 SSTLG-FNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWE 211
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ E + GV PD YT ++ + E+ R M +G ++ YN L+ L
Sbjct: 212 LFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLC 271
Query: 241 QVGMLDEA 248
+ + EA
Sbjct: 272 KGDRVSEA 279
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 134/273 (49%), Gaps = 34/273 (12%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+Y+ ++ G +D + F L+ E+ K G+ + V Y +L+ G+F+ G ++A++ +
Sbjct: 78 VMYNTVIYGMCKDKHVNDAFDLYSEMVSK--GISPNVVTYSALISGFFVVGKLKDAIDLF 135
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN------- 123
N+ + EN +K N ++D C + K E +F M + P + N
Sbjct: 136 NKIILEN--IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYR 193
Query: 124 -----------------------LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
+ S+N++ +G+C + A+ +F +M P+ +
Sbjct: 194 LVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVV 253
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N+LID L K+G ++ A +L +M D+GV P+ TY ++DA F+ ++VD K
Sbjct: 254 TYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKF 313
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
D G++P++ Y L+ L + G L +A++ F+
Sbjct: 314 KDQGIQPSMYTYTILIDGLCKGGRLKDARNIFE 346
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 140/290 (48%), Gaps = 10/290 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ + + + L+ G G F ++L G D V YG+L+ G G
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVAL--GFHLDQVSYGTLIHGLCKVGETR 59
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ G+ V+++AV N+V+ +C + ++A L+ M ++ P N+
Sbjct: 60 AALDLLQRVDGK--LVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISP-----NV 112
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + G+ G+ KDAI++F K+ PD +FN L+D CK+ + E + ++
Sbjct: 113 VTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAM 172
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +G+ PD TY L+D V V+ + F M G+ P++ YN L+ ++
Sbjct: 173 MMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKK 232
Query: 245 LDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+D+A + F+ M K + + +Y ++ LS G++ L++V + D G
Sbjct: 233 VDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRG 282
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 162/335 (48%), Gaps = 16/335 (4%)
Query: 1 MFVKGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF 58
M +GF DP +Y+Y L+ G + G+ D ++ ++ E+ + V Y +++
Sbjct: 327 MLREGF--DPDIYTYNSLISGLCKLGEVDEAVKVLNQMIER--DCSPNTVTYNTIISTLC 382
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ EEA + G+ + NS++ LC + A++L+ MK + P
Sbjct: 383 KENQVEEATKLALVLTGK--GILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPD 440
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++N++ D C +G+ ++A+ + ++M C+ + +++N LID CKN +AEA
Sbjct: 441 EF-----TYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEA 495
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EE++ +M +GV+ + TY L+D + RV++ + +M+ GLRP+ YN L+
Sbjct: 496 EEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTY 555
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
+ G + +A M + D +Y ++ L G+++ +++ I GI
Sbjct: 556 FCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTI-QMKGINL 614
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
+ V L + R +E V+L ++ EKAEA
Sbjct: 615 TPHAYNPVIQALFRRKRSKEAVRLF-REMIEKAEA 648
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 140/298 (46%), Gaps = 12/298 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + D Y+ L+ G + L++E+K K G D Y L+ +G
Sbjct: 400 KGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTK--GCHPDEFTYNMLIDSLCFRGKL 457
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA+ E E S + + N+++D C N + EA ++FD+M+ + ++ N
Sbjct: 458 QEALNLLKEM--EVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQ-----GVSRN 510
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + DG C R ++A ++ +M PD ++N+L+ CK G + +A ++
Sbjct: 511 SVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQ 570
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M+ G PD TYG L+ + RV+ R + G+ YN ++ L +
Sbjct: 571 TMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRK 630
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSD-GGKLDEILEIVGGILDDGGI-EFS 298
EA F M++K + DA +YK + + L GG + E ++ V +L+ G + EFS
Sbjct: 631 RSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFS 688
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 132/288 (45%), Gaps = 11/288 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D ++ L+ R L EE+++ G++ D + ++M+G+ +
Sbjct: 186 MVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMED--FGLLPDEKTFTTIMQGFIEE 243
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK-NEHNPPKR 119
G + AM + V + ++ V N +++ C G+ +EAL+ + M E P +
Sbjct: 244 GNLDGAMRVKEQMV--EAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDK 301
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+FN++ +G G K A+EV M PD ++N+LI LCK G + EA
Sbjct: 302 Y-----TFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAV 356
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
++ +M ++ +P+ TY ++ + N+V++ + G+ P++ YN L+ L
Sbjct: 357 KVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGL 416
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
A + M K D+ +Y ++ +L GKL E L ++
Sbjct: 417 CLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLL 464
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 16/189 (8%)
Query: 75 GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGY 134
+ + K S+ VL L G+FD + MK + ++ S V + Y
Sbjct: 80 SKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLS-----VIDNDSLLVFIESY 134
Query: 135 CGQG------RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
G +F DA+EV E+ +T +N L++ L L E + M +
Sbjct: 135 ASFGLYNEILQFVDAMEV-----EFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSR 189
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ PD T+ +L+ A +++ +M D GL P+ + ++ ++ G LD A
Sbjct: 190 GIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGA 249
Query: 249 KSFFDIMVK 257
+ MV+
Sbjct: 250 MRVKEQMVE 258
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 142/299 (47%), Gaps = 12/299 (4%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
VKG D ++ L+ + GD RLFEE+K G D V Y +L+ G
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS--GCTPDEVTYNTLIDNLCSLGK 441
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A++ + E++ S + N+++D LC + +EA ++FD+M + ++
Sbjct: 442 LGKALDLLKDM--ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG-----ISR 494
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +FN + DG C + DA E+ +M P+ +++N+++ CK G + +A ++
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M+ G D TYG L++ + R R M G+RP YN ++ L +
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSD-GGKLDEILEIVGGILDDGGI-EFS 298
+ +A S F M + + DA +YK + + L GG + E + + ++D G I EFS
Sbjct: 615 NNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 137/284 (48%), Gaps = 12/284 (4%)
Query: 9 DPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP V++Y ++ ++G + + ++ ++ G + D + +L+ EEA
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR--GCLPDITTFNTLIAALCTGNRLEEA 375
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
++ + + S + N +++ALC G AL+LF+ MKN P + +
Sbjct: 376 LDLARQVTVKGVSPDVYTF--NILINALCKVGDPHLALRLFEEMKNSGCTPDEV-----T 428
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + D C G+ A+++ + M C T+++N +ID LCK + EAEE++ +M
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+G++ + T+ L+D + ++DD +M+ GL+PN YN ++ + G +
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
+A + M ++D +Y ++ L G+ L+++ G+
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 143/318 (44%), Gaps = 11/318 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V ++ LM R + EE+ + GV D + +LM+G+ +
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSR--GVAPDETTFTTLMQGFVEE 229
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A+ + S + V N +++ C G+ ++AL + + P ++
Sbjct: 230 GSIEAALRVKARMLEMGCSA--TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N +G C A++V M + PD ++N +++ LCKNG L EA+
Sbjct: 288 -----TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKG 342
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +M D+G PD T+ L+ A NR+++ R++ G+ P++ +N L+ L
Sbjct: 343 ILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALC 402
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+VG A F+ M D+ +Y ++ L GKL + L+++ + G +
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTI 462
Query: 300 ELQEFVKGELSKEGREEE 317
+ G L K+ R EE
Sbjct: 463 TYNTIIDG-LCKKMRIEE 479
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 14/276 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG--GVVSDGVVYGSLMKGYFMKGM 62
G AD VVY++L L + +G +L E + ++G G+ D V + +LMK
Sbjct: 141 GIQADTVVYNHL-LNVLVEGSK---MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQ 196
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
A+ E + V +++ G + AL++ RM ++ V
Sbjct: 197 VRTAVLMLEEM--SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N V+ +GYC GR +DA+ ++ PD +++N ++ LC+N + A ++
Sbjct: 255 N-----VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVM 309
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M +G +PD +TY ++++ + ++++ +MVD G P++ +N L+ L
Sbjct: 310 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369
Query: 243 GMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGG 277
L+EA + VK + D ++ ++ AL G
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 41/256 (16%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E VK+ V +S LD+ FD+A+ D + N+ P + + +N + +
Sbjct: 103 EGHQVKLGVV--HSFLDSYEGQQLFDDAV---DLILNQLQPLFGIQADTVVYNHLLNVLV 157
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+ K V+ +MG PD ++FN L+ LC+ + A + EMS +GV PDE
Sbjct: 158 EGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDET 217
Query: 196 TYGLLMDACFE-----------------------------------VNRVDDGATYFRKM 220
T+ LM E + RV+D Y ++
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKL 279
+ G P+ YN V L Q + A D+MV++ D +Y ++ L G+L
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337
Query: 280 DEILEIVGGILDDGGI 295
+E I+ ++D G +
Sbjct: 338 EEAKGILNQMVDRGCL 353
>gi|8778411|gb|AAF79419.1|AC025808_1 F18O14.1 [Arabidopsis thaliana]
Length = 689
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 11/305 (3%)
Query: 6 FVADPVVY--SYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
F P V+ S ++ + R G+ D +E + LG + + V Y SL+ GY M G +
Sbjct: 4 FEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLG-LELNVVTYNSLINGYAMIG-D 61
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E M + E V + V S++ C G +EA +F+ +K K+L +
Sbjct: 62 VEGMTRVLRLMSERG-VSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKE-----KKLVAD 115
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ V+ DGYC G+ +DA+ V M E +T N+LI+ CK+G L EAE+++
Sbjct: 116 QHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFS 175
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M+D + PD +TY L+D VD+ +M + P + YN L+ ++G
Sbjct: 176 RMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 235
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+ S + +M+K+ + D+ S +++AL G +E +++ +L G + + L
Sbjct: 236 AFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLN 295
Query: 303 EFVKG 307
+ G
Sbjct: 296 VMISG 300
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 123/250 (49%), Gaps = 9/250 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y+ L+ G+ + G + +FE LKEK +V+D +YG LM GY G
Sbjct: 75 RGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEK--KLVADQHMYGVLMDGYCRTGQI 132
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A+ ++ + V+ + NS+++ C +G+ EA ++F RM + P
Sbjct: 133 RDAVRVHDNMI--EIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH---- 186
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + DGYC G +A+++ +M + P +++N L+ + G + L+
Sbjct: 187 -HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 245
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +GVN DE + L++A F++ ++ + ++ GL + N ++ L ++
Sbjct: 246 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 305
Query: 244 MLDEAKSFFD 253
++EAK D
Sbjct: 306 KVNEAKEILD 315
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 150/323 (46%), Gaps = 11/323 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D Y+ L+ G+ R G D +L +++ +K VV + Y L+KGY G + +
Sbjct: 185 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQK--EVVPTVMTYNILLKGYSRIGAFHDVLS 242
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + V ++ +++L+AL G F+EA+KL+ E+ + L + + N
Sbjct: 243 LWKMML--KRGVNADEISCSTLLEALFKLGDFNEAMKLW-----ENVLARGLLTDTITLN 295
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
VM G C + +A E+ + +RC P ++ L K G L EA + M K
Sbjct: 296 VMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERK 355
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ P Y L+ F+ ++ A ++ GL P +A Y L+ +GM+D+A
Sbjct: 356 GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 415
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD-DGGIEFSEELQEFVK 306
+ F+++ K + ++ + +L K+DE ++ I+D D + + L+EF++
Sbjct: 416 YATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLE 475
Query: 307 GELSKEGREEEVVKLMEKKEREK 329
+ + +++ + +E +K
Sbjct: 476 ASATTCLKTQKIAESVENSTPKK 498
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 38/289 (13%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG +Y+ L+ G + + V L EL+ + G+ YG+L+ G+ GM
Sbjct: 355 KGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR--GLTPTVATYGALITGWCNIGMI 412
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN----------- 112
++A E + + ++ ++ + + ++L K DEA L ++ +
Sbjct: 413 DKAYATCFEMIEKGITLNVNICS--KIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSL 470
Query: 113 ---------------------EHNPPKRLAV-NLGSFNVMADGYCGQGRFKDAIEVFRKM 150
E++ PK+L V N +NV G C G+ +DA ++F +
Sbjct: 471 KEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL 530
Query: 151 -GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
R PD ++ LI G + +A L EM+ KG+ P+ TY L+ ++
Sbjct: 531 LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGN 590
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
VD K+ G+ PN YN L+ LV+ G + EA + M++K
Sbjct: 591 VDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEK 639
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 53 LMKGY--FMKGMEEEAMECYN-----EAVGENSSVKMSAVANNSVLDA----LCNNGKFD 101
L+ GY + +E A C E+V ENS+ K V NN V + LC GK +
Sbjct: 463 LLPGYQSLKEFLEASATTCLKTQKIAESV-ENSTPKKLLVPNNIVYNVAIAGLCKAGKLE 521
Query: 102 EALKLF-DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
+A KLF D + ++ P ++ ++ G G A + +M P+ +
Sbjct: 522 DARKLFSDLLSSDRFIPDEY-----TYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIV 576
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N LI LCK G + A+ L ++ KG+ P+ TY L+D + V + KM
Sbjct: 577 TYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 636
Query: 221 VDSGL 225
++ GL
Sbjct: 637 IEKGL 641
>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 669
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 148/327 (45%), Gaps = 18/327 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + +S L + G D + E++++ G D V+Y +L+ + +
Sbjct: 338 MVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKY--GCRPDVVIYNTLINYFSEQ 395
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ + + ++ N+ L ALC ++ + +L +M E P +
Sbjct: 396 GRVDDALMLLDSMLCNPDTISF-----NAALKALCRTERWYDVEELIAQMLREDCPLIEM 450
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+FN++ D C G AIEVF +M +YRC+PD +++++LI+ + G++ A E
Sbjct: 451 -----TFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIE 505
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M K PD ++Y ++ R +D M PN +N L+ L
Sbjct: 506 LFQSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLC 562
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGI-LDDGGIEFS 298
Q G D A F M + D +Y ++ S+ G+LD+ L ++ + I ++
Sbjct: 563 QKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCKPDAISYN 622
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKK 325
L+ + E KE EE V +++ KK
Sbjct: 623 STLKGLCRAERWKEA-EEIVAEMLRKK 648
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 17/283 (6%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
A+ V Y+ L+ G+ R G L + V D Y +++KG E+A
Sbjct: 176 ANVVTYTALINGYCRSGRLADALNLIASMP-----VAPDTYTYNTVLKGLCGAKQWEKAE 230
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E E + N A + + C NG D A++L +RM P ++ +
Sbjct: 231 ELMEEMIRNNCHPNEVTFATQ--IRSFCQNGLLDHAVQLLERMPRYGCTP-----DVVIY 283
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ + +G+ QGR DA+ + M C P+T+ +N + LC + EL EM
Sbjct: 284 STLVNGFSEQGRVDDALVLLNTM---LCKPNTVCYNAALKGLCMAERWKDVGELIAEMVR 340
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
K P+E T+ +L + VD +M G RP++ +YN L+ + G +D+
Sbjct: 341 KDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDD 400
Query: 248 AKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
A D M+ D S+ +KAL + ++ E++ +L
Sbjct: 401 ALMLLDSML--CNPDTISFNAALKALCRTERWYDVEELIAQML 441
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 22/259 (8%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSA--VANN 88
R+ + LKE G +D V + +L+ GY G +A E V E + V +A V
Sbjct: 131 RVLDALKES-GS--ADAVSHNTLVAGYCRDGRLADA-----ERVLEAAKVSGAANVVTYT 182
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
++++ C +G+ +AL L M +A + ++N + G CG +++ A E+
Sbjct: 183 ALINGYCRSGRLADALNLIASMP--------VAPDTYTYNTVLKGLCGAKQWEKAEELME 234
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+M C P+ ++F I C+NG+L A +L M G PD Y L++ E
Sbjct: 235 EMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQG 294
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
RVDD M+ +PN YN + L + MV+K ++A++
Sbjct: 295 RVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFS 351
Query: 268 FMMKALSDGGKLDEILEIV 286
+ L G +D +E+V
Sbjct: 352 MLTSCLCQHGLVDCAMEVV 370
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 15/191 (7%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
D V YS L+ GF G + LF+ + K D Y +++KG E+A
Sbjct: 481 TPDIVTYSSLINGFSEQGLVESAIELFQSMPCK-----PDIFSYNAVLKGLCRAARWEDA 535
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
E ++ + + N ++++LC G D A+++F +M + P ++ +
Sbjct: 536 GELIANMARKDCPP--NEITFNILINSLCQKGFADRAIEVFKQMPEYGSTP-----DIFT 588
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + +G+ QGR DA+ + M C PD +S+N+ + LC+ EAEE+ EM
Sbjct: 589 YNALINGFSEQGRLDDALNLLSTMS---CKPDAISYNSTLKGLCRAERWKEAEEIVAEML 645
Query: 187 DKGVNPDEYTY 197
K P+E T+
Sbjct: 646 RKKCPPNEVTF 656
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 21/306 (6%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS---VKMSAVANN 88
L E+KE + + V +G L+ +EA+E + + G S+ V+ + N
Sbjct: 327 LLAEMKEM--DIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYN 384
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
+++D LC G+ +E L L +RM+++ R N ++N + DGYC + A E+F
Sbjct: 385 TLIDGLCKVGRQEEGLGLVERMRSQ----PRCMPNTVTYNCLIDGYCKASMIEAARELFD 440
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+M + P+ ++ N L+D +CK+G + A E + EM KG+ + TY L+ A VN
Sbjct: 441 QMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVN 500
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
++ F +M+++G P+ VY L+ L Q G LD A M + D S+
Sbjct: 501 NIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFN 560
Query: 268 FMMKALSDGGKLDEILEIV-----GGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
++ KLDE E++ GI D G+ ++ + F SK G +LM
Sbjct: 561 VLINGFCRKNKLDEAYEMLKEMENAGIKPD-GVTYNTLISHF-----SKTGDFSTAHRLM 614
Query: 323 EKKERE 328
+K +E
Sbjct: 615 KKMVKE 620
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 127/282 (45%), Gaps = 11/282 (3%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+ + V Y+ L+ G+ + + LF+++ + GV + V +L+ G G A
Sbjct: 413 MPNTVTYNCLIDGYCKASMIEAARELFDQMNKD--GVPPNVVTLNTLVDGMCKHGRINGA 470
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+E +NE G+ +K +AV +++ A CN ++A++LFD M P +
Sbjct: 471 VEFFNEMQGK--GLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIV----- 523
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+ + G G+ A V KM E SPD +SFN LI+ C+ L EA E+ EM
Sbjct: 524 YYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEME 583
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G+ PD TY L+ + +KMV GL P + Y L+ G LD
Sbjct: 584 NAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLD 643
Query: 247 EAKSFFDIM--VKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
EA F M K+ + Y ++ +L ++D L ++
Sbjct: 644 EAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLM 685
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 10/252 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D +VY L+ G + G D + ++KE G D V + L+ G+ K
Sbjct: 512 MLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKE--AGFSPDIVSFNVLINGFCRK 569
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA E E EN+ +K V N+++ G F A +L +M E L
Sbjct: 570 NKLDEAYEMLKEM--ENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG-----L 622
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY-RCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ ++ + YC G +A+++FR M + P+T+ +N LI+ LC+ + A
Sbjct: 623 VPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLAL 682
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L +M KGV P+ T+ + E N + +M + P+ L L
Sbjct: 683 SLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWL 742
Query: 240 VQVGMLDEAKSF 251
VG + KSF
Sbjct: 743 SAVGETAKLKSF 754
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 126/287 (43%), Gaps = 11/287 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ L+ F + + LF+E+ E G D +VY +L+ G G
Sbjct: 480 KGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLE--AGCSPDAIVYYTLISGLSQAGKL 537
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A ++ + + V+ N +++ C K DEA ++ M+N P +
Sbjct: 538 DRASFVLSKM--KEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGV--- 592
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + + G F A + +KM + P +++ LI C NG L EA +++
Sbjct: 593 --TYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFR 650
Query: 184 EMSDKG-VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+MS V P+ Y +L+++ N+VD + M G++PN +N + L +
Sbjct: 651 DMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEK 710
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGG 288
L +A D M + D + + + + LS G+ ++ V G
Sbjct: 711 NWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQG 757
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 121/311 (38%), Gaps = 58/311 (18%)
Query: 53 LMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN 112
L++ + M +E+ YNE S +++ + N ++D L G+ D+AL L D M
Sbjct: 165 LIRCFGRAQMVDESFLVYNELC---PSRRLTHI-RNILIDVLFRKGRVDDALHLLDEML- 219
Query: 113 EHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE------VFRKMGEYRCSPDTLSFNNLI 166
P N + +++ + + A++ + K E+ P+++ LI
Sbjct: 220 --QPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLI 277
Query: 167 DQLCKNG-----------------------------MLAEAEE------LYGEMSDKGVN 191
+LC++G L A E L EM + +
Sbjct: 278 SRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQ 337
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG------LRPNLAVYNRLVGKLVQVGML 245
P+ T+G+L++ + RVD+ F KM + G + P++ YN L+ L +VG
Sbjct: 338 PNVVTFGILINHLCKFRRVDEALEVFEKM-NGGESNGFLVEPDVITYNTLIDGLCKVGRQ 396
Query: 246 DEAKSFFDIMVKKLKM--DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+E + M + + + +Y ++ ++ E+ + DG L
Sbjct: 397 EEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNT 456
Query: 304 FVKGELSKEGR 314
V G + K GR
Sbjct: 457 LVDG-MCKHGR 466
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 156/360 (43%), Gaps = 51/360 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G V Y+ +M G R+GD D L L G + V Y +++KG
Sbjct: 213 MRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSY--GCTPNTVNYNTVLKGLRTA 270
Query: 61 GMEEEAMECYNEAVGENS-------SVKMSA--------------------------VAN 87
G E+ E E EN SV +S+ V
Sbjct: 271 GRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTY 330
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+V+ LC G D AL L M+ + P N+ ++N++ G C R++DA ++
Sbjct: 331 NAVVSGLCEQGHVDGALYLLSNMQTDGCKP-----NIFTYNILVKGLCNAERWEDAEDLM 385
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
KM + C PD L+FN +I LC+ G+ +A E++ +M +KG P+ TY +++ +
Sbjct: 386 AKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKT 445
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS-- 265
+++ +M G P + Y+ L L + L EA MV KL+ S
Sbjct: 446 GKMEQSLELLNEMGSKGFNPEIN-YHLLAECLNEEDKLVEAIQ----MVHKLQDTGISPQ 500
Query: 266 ---YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
Y ++ L GK D+ ++I+ ++ DG + ++G L+ EG +E +L+
Sbjct: 501 AVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQG-LAHEGYMKEARELL 559
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 12/284 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G + V Y +L GY G +EA V + V SA A N ++ ALC G+
Sbjct: 115 GSAATAVTYSALADGYCRVGRLDEA-----RRVVDGMPVLPSAYAYNPLMHALCVRGQVR 169
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+AL L D M P ++ ++N++ + C ++ A+E+ M C+P ++
Sbjct: 170 DALVLLDNMLYRGCAP-----DVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVT 224
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+N ++D +C+ G + A EL + G P+ Y ++ R +D +M
Sbjct: 225 YNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMF 284
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
P+ A + ++ L Q G+ A + M K + +Y ++ L + G +D
Sbjct: 285 SENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVD 344
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
L ++ + DG VKG + E R E+ LM K
Sbjct: 345 GALYLLSNMQTDGCKPNIFTYNILVKGLCNAE-RWEDAEDLMAK 387
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 17 MLGFV-RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE--A 73
++GF+ + G + +F+++ EK G + V Y S+++G G E+++E NE +
Sbjct: 403 IIGFLCQKGLTMQAVEVFKQMPEK--GCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGS 460
Query: 74 VGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADG 133
G N + +A + L K EA+++ ++++ P+ + +N + G
Sbjct: 461 KGFNPEINYHLLA-----ECLNEEDKLVEAIQMVHKLQDTGISPQAVL-----YNTILLG 510
Query: 134 YCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
C G+ AI++ M C PD +++ LI L G + EA EL +S + V
Sbjct: 511 LCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDV 567
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 73/198 (36%), Gaps = 31/198 (15%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEEL------------YGEMSD--------------- 187
C PD N L+ LC+ G A+A + Y ++D
Sbjct: 84 CPPDVALANRLVRDLCRRGRPADAARVVEACGSAATAVTYSALADGYCRVGRLDEARRVV 143
Query: 188 --KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
V P Y Y LM A +V D M+ G P++ YN L+ +
Sbjct: 144 DGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGY 203
Query: 246 DEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
+A D+M V+ + +Y +M + G +D E++ + G +
Sbjct: 204 RQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTV 263
Query: 305 VKGELSKEGREEEVVKLM 322
+KG L GR E+V +L+
Sbjct: 264 LKG-LRTAGRWEDVEELI 280
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 157/364 (43%), Gaps = 49/364 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + D + + L+ GF R G + + E L++ G V D + Y L+ GY
Sbjct: 140 MVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQ--SGAVPDVITYNVLISGYCKS 197
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A++ V + +V V N++L LC++GK +A+++ DR + P
Sbjct: 198 GEIDNALQ-----VLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP--- 249
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ ++ + C + A+++ +M PD +++N LI+ +CK G L EA +
Sbjct: 250 --DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIK 307
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
M G P+ T+ +++ + R D M+ G P++ +N L+ L
Sbjct: 308 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 367
Query: 241 QVGML-----------------------------------DEAKSFFDIMVKK-LKMDDA 264
+ G+L D A + DIMV + D
Sbjct: 368 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 427
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+Y ++ AL GK+D +EI+ + G + G LSK G+ E +KL+++
Sbjct: 428 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG-LSKVGKTERAIKLLDE 486
Query: 325 KERE 328
R+
Sbjct: 487 MRRK 490
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 128/268 (47%), Gaps = 13/268 (4%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
VR+G+ + F+ E + + G + D + SL++G+ G ++A + + E S
Sbjct: 124 LVRNGELEDGFKFLESMVYR--GDIPDIIPCTSLIRGFCRIGKTKKAT--WVMEILEQSG 179
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ N ++ C +G+ D AL++ DRM +A ++ ++N + C G+
Sbjct: 180 AVPDVITYNVLISGYCKSGEIDNALQVLDRMN--------VAPDVVTYNTILRTLCDSGK 231
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
K A+EV + + C PD +++ LI+ CK + +A +L EM +KG PD TY +
Sbjct: 232 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 291
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG-MLDEAKSFFDIMVKK 258
L++ + R+D+ + M G +PN+ +N ++ + G +D K D++ K
Sbjct: 292 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 351
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIV 286
++ ++ L G L ++I+
Sbjct: 352 CSPSVVTFNILINFLCRQGLLGRAIDIL 379
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 131/285 (45%), Gaps = 10/285 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V Y+ L+ G ++G D + + G + + + +++ G
Sbjct: 280 KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY--GCQPNVITHNIILRSMCSTGRW 337
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + ++ + + S S V N +++ LC G A+ + ++M P L
Sbjct: 338 MDAEKLLSDMLRKGCSP--SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL--- 392
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N + G+C + + AIE M C PD +++N L+ LCK+G + A E+
Sbjct: 393 --SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 450
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++S KG +P TY ++D +V + + +M GL+P++ Y+ LV L + G
Sbjct: 451 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 510
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
+DEA FF D+ ++ + +Y +M L + D ++ +
Sbjct: 511 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 555
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 102/234 (43%), Gaps = 34/234 (14%)
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAV---------------------------- 122
L L NG+ ++ K + M + P +
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 123 --NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++NV+ GYC G +A++V +M +PD +++N ++ LC +G L +A E
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ K PD TY +L++A + + V +M + G +P++ YN L+ +
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G LDEA F + M + + ++ +++++ G+ + +++ +L G
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 351
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 9/190 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ +DG D + +L K G + Y +++ G
Sbjct: 417 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK--GCSPVLITYNTVIDGLSKV 474
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A++ +E +K + +S++ L GK DEA+K F ++ P
Sbjct: 475 GKTERAIKLLDEM--RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRP--- 529
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++N + G C + AI+ M RC P ++ LI+ + G+ EA +
Sbjct: 530 --NAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALD 587
Query: 181 LYGEMSDKGV 190
L E+ +G+
Sbjct: 588 LLNELCSRGL 597
>gi|255661014|gb|ACU25676.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 376
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 136/282 (48%), Gaps = 10/282 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G + D V ++E +KE G V D + YG L+ G+ G +++
Sbjct: 62 FNIMMRGLFDNAKVDEVISIWELMKES--GYVEDSITYGILVHGFCKNGYLNKSLHVLE- 118
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ E + A A +++++ LC K D+A+ + + M P N +N + +
Sbjct: 119 -IAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKP-----NAHVYNALIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DAI V R+MG SP ++++ LI+ LCK EA +L EM DKG+NP
Sbjct: 173 GLVGASKFEDAIRVLREMGTTHFSPTVVTYSTLINGLCKGERFGEAYDLVKEMLDKGLNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-F 251
TY LL+ +V+ + +++ G +P++ ++N ++ L VG + A S +
Sbjct: 233 SVITYSLLIKGLCLDCKVEKAFQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQLALSLY 292
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
F++ + ++ +M+ G L I I+ +G
Sbjct: 293 FNMNRWDCAPNLVTHNTLMEGFYKDGDFRNALVIWARIMRNG 334
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 127/284 (44%), Gaps = 22/284 (7%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+++E+ E V D VVY +++ G+F ++ + + E +G S +S
Sbjct: 4 GDIDGAKRVYKEIVES--KVSPDAVVYNAMLNGFFRVRRIKDCFKLW-ELMGREGSRSVS 60
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ N ++ L +N K DE + +++ MK + ++ ++ G+C G +
Sbjct: 61 SF--NIMMRGLFDNAKVDEVISIWELMKESGYVEDSI-----TYGILVHGFCKNGYLNKS 113
Query: 144 IEVF----RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+ V RK G D +++ +I+ LCK L +A + M G P+ + Y
Sbjct: 114 LHVLEIAERKGGVL----DAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNA 169
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
L++ ++ +D R+M + P + Y+ L+ L + EA M+ K
Sbjct: 170 LINGLVGASKFEDAIRVLREMGTTHFSPTVVTYSTLINGLCKGERFGEAYDLVKEMLDKG 229
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L +Y ++K L K+++ ++ ++ G F ++Q
Sbjct: 230 LNPSVITYSLLIKGLCLDCKVEKAFQLWNQVISKG---FKPDVQ 270
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 14/219 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VY+ L+ G V + R+ E+ V Y +L+ G
Sbjct: 155 MIKSGCKPNAHVYNALINGLVGASKFEDAIRVLREMGTT--HFSPTVVTYSTLINGLCKG 212
Query: 61 GMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
EA + E + G N SV + + ++ LC + K ++A +L++++ ++ P
Sbjct: 213 ERFGEAYDLVKEMLDKGLNPSV----ITYSLLIKGLCLDCKVEKAFQLWNQVISKGFKP- 267
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ N+M G C G+ + A+ ++ M + C+P+ ++ N L++ K+G A
Sbjct: 268 ----DVQMHNIMIHGLCSVGKMQLALSLYFNMNRWDCAPNLVTHNTLMEGFYKDGDFRNA 323
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
++ + G+ PD +Y + + NR+ GA F
Sbjct: 324 LVIWARIMRNGLQPDIISYNITLKGLCSCNRI-SGAILF 361
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS 265
E+ +D ++++V+S + P+ VYN ++ +V + + +++M ++ +S
Sbjct: 2 EIGDIDGAKRVYKEIVESKVSPDAVVYNAMLNGFFRVRRIKDCFKLWELMGREGSRSVSS 61
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKK 325
+ MM+ L D K+DE++ I + + G +E S V G K G + + ++E
Sbjct: 62 FNIMMRGLFDNAKVDEVISIWELMKESGYVEDSITYGILVHG-FCKNGYLNKSLHVLEIA 120
Query: 326 ERE 328
ER+
Sbjct: 121 ERK 123
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 148/322 (45%), Gaps = 10/322 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ ++ R+GD D L L + G + V Y +++KG+
Sbjct: 224 MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSR--GCKPNTVNYNTVLKGFCSI 281
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A E +E V EN + + N +++ LC G + ++M ++H
Sbjct: 282 ERWVDADEILDEMVRENCPPNEATL--NVIINTLCRKGLLQKVTLYLEKM-SKHG----C 334
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N + G C QG A+E+ M + C PD +++N ++ LC +AEE
Sbjct: 335 TANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEE 394
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +MS PD T+ ++ + + F++M + G PN Y+ ++G L
Sbjct: 395 LMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLT 454
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+ G +++A + M K D Y+ + ++L+ K++E++++V L D GI
Sbjct: 455 KAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHK-LQDSGISPQTV 513
Query: 301 LQEFVKGELSKEGREEEVVKLM 322
L V L + G+ + + ++
Sbjct: 514 LYNTVLLGLCRNGKTDYAIDVL 535
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 131/290 (45%), Gaps = 12/290 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS-AVANNSVLDALCNNGKF 100
G + YG+L+ GY G+ E+A G + V+ S A A+N ++ ALC G+
Sbjct: 123 GPEATAATYGALVDGYCRAGLLEDARRVVG---GMPAHVQASSAYAHNPLIHALCERGRV 179
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
+AL + D M P ++ ++N++ C ++ A+E+ M C P+ +
Sbjct: 180 ADALVVLDGMLCRGCAP-----DVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNV 234
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N +ID +C+ G + +A EL + +G P+ Y ++ + R D +M
Sbjct: 235 TYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEM 294
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
V PN A N ++ L + G+L + + + M K + +Y ++ + + G +
Sbjct: 295 VRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNV 354
Query: 280 DEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE--EEVVKLMEKKER 327
D LE++ + G +KG S + E EE++ M + +R
Sbjct: 355 DSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDR 404
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 122/233 (52%), Gaps = 9/233 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G ++ V Y +++ G +G + A+E + ++ K V N+VL LC+ +++
Sbjct: 333 GCTANVVTYNAVISGMCEQGNVDSALELLSNM--QSFGCKPDIVTYNTVLKGLCSADRWE 390
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A +L +M RL N +FN + +C +G A EVF++M E C+P++ +
Sbjct: 391 DAEELMIKMSQN----DRLPDN-STFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTT 445
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
++ +I L K G + +A EL EM++KG N D+ Y +L ++ + +++++ K+
Sbjct: 446 YSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQ 504
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM-DDASYKFMMKAL 273
DSG+ P +YN ++ L + G D A MV M D+++Y +++ L
Sbjct: 505 DSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGL 557
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 53/244 (21%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G A+ V Y+ ++ G G+ D L ++ G D V Y +++KG
Sbjct: 329 MSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQS--FGCKPDIVTYNTVLKGLCSA 386
Query: 61 GMEEEAMECY-----NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
E+A E N+ + +NS+ N+++ C G +A ++F +M
Sbjct: 387 DRWEDAEELMIKMSQNDRLPDNSTF-------NTIISFWCQKGLILQAFEVFKQM----- 434
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE--------YRC------------ 155
P K N +++ + G G+ + A+E+ +M YR
Sbjct: 435 PEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIE 494
Query: 156 --------------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
SP T+ +N ++ LC+NG A ++ +M G PDE TY +L+
Sbjct: 495 EVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILI 554
Query: 202 DACF 205
+ F
Sbjct: 555 EGLF 558
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 12/162 (7%)
Query: 30 FRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGEN-SSVKMSAVANN 88
F +F+++ EK G + Y +++ G G E+A+E NE + ++ KM V
Sbjct: 428 FEVFKQMPEK--GCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRV--- 482
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
+ ++L K +E +++ ++++ P+ + +N + G C G+ AI+V
Sbjct: 483 -LTESLNKEDKIEEVVQVVHKLQDSGISPQTVL-----YNTVLLGLCRNGKTDYAIDVLA 536
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
M C PD ++ LI+ L G EA EL + + V
Sbjct: 537 DMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDV 578
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 150/313 (47%), Gaps = 37/313 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-VYGSLMKGYFM 59
M KG D V Y ++ G + GD+D F L ++++ G + GV +Y +++ G
Sbjct: 826 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ---GKLEPGVLIYNTIIDGLCK 882
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNP-- 116
++A+ + E E ++ + V +S++ LCN G++ +A +L D ++ + NP
Sbjct: 883 YKHMDDALNLFKEM--ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 940
Query: 117 ---------------------------PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+ + ++ +++ + +G+C R +A ++F
Sbjct: 941 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 1000
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M C PD +++N LI CK + E E++ EMS +G+ + TY +L+ F+
Sbjct: 1001 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 1060
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKF 268
D F++MV G+ PN+ YN L+ L + G L++A F+ + + K++ +Y
Sbjct: 1061 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 1120
Query: 269 MMKALSDGGKLDE 281
M++ + GK+++
Sbjct: 1121 MIEGMCKAGKVED 1133
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 146/310 (47%), Gaps = 21/310 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ L+ G RL ++ +K + + + Y +L+ + G
Sbjct: 322 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK--KITPNVITYSALLDAFVKNGKV 379
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E + E V S+ V +S+++ LC + + DEA ++FD M + K +
Sbjct: 380 LEAKELFEEMV--RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS-----KGCLAD 432
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S+N + +G+C R +D +++FR+M + +T+++N LI + G + +A+E +
Sbjct: 433 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 492
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M G++PD +TY +L+ + ++ F M + ++ Y ++ + + G
Sbjct: 493 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 552
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI-----------LD 291
++EA S F + +K LK D +Y MM L G L E+ + + L
Sbjct: 553 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 612
Query: 292 DGGIEFSEEL 301
DG I S EL
Sbjct: 613 DGDITLSAEL 622
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 137/286 (47%), Gaps = 10/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G+ D V L+ GF R L +++ E G D V Y +++
Sbjct: 249 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI--GYKPDIVAYNAIIDSLCKT 306
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A + + E E ++ + V ++++ LCN+ ++ +A +L M K++
Sbjct: 307 KRVNDAFDFFKEI--ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK-----KKI 359
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +++ + D + G+ +A E+F +M PD +++++LI+ LC + + EA +
Sbjct: 360 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 419
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M KG D +Y L++ + RV+DG FR+M GL N YN L+
Sbjct: 420 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 479
Query: 241 QVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
Q G +D+A+ FF M + D +Y ++ L D G+L++ L I
Sbjct: 480 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 525
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 138/278 (49%), Gaps = 10/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D V Y+ ++ + + F F+E++ K G+ + V Y +L+ G
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK--GIRPNVVTYTALVNGLCNSSRWS 345
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A ++ + + + + + +++LDA NGK EA +LF+ M P ++
Sbjct: 346 DAARLLSDMIKKK--ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP-----DI 398
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + +G C R +A ++F M C D +S+N LI+ CK + + +L+ E
Sbjct: 399 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 458
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS +G+ + TY L+ F+ VD +F +M G+ P++ YN L+G L G
Sbjct: 459 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 518
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
L++A F+ M K+ + +D +Y +++ + GK++E
Sbjct: 519 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 556
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 131/282 (46%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ + V S L+ G+ L +++ + G + V + +L+ G F+
Sbjct: 760 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF--VTGYQPNTVTFNTLIHGLFLHNKAS 817
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EAM + V + + V V++ LC G D A L ++M+ P L
Sbjct: 818 EAMALIDRMVAKGCQPDL--VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI--- 872
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+N + DG C DA+ +F++M P+ +++++LI LC G ++A L +
Sbjct: 873 --YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 930
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++ +NPD +T+ L+DA + ++ + + +MV + P++ Y+ L+
Sbjct: 931 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 990
Query: 245 LDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI 285
LDEAK F+ MV K D +Y ++K +++E +E+
Sbjct: 991 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 1032
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 11/230 (4%)
Query: 9 DP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP V YS L+ GF D ++FE + K D V Y +L+KG+ EE
Sbjct: 972 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK--HCFPDVVTYNTLIKGFCKYKRVEEG 1029
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
ME + E + + V N ++ L G D A ++F M ++ PP N+ +
Sbjct: 1030 MEVFREM--SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP-----NIMT 1082
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + DG C G+ + A+ VF + + P ++N +I+ +CK G + + +L+ +S
Sbjct: 1083 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 1142
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
KGV PD Y ++ ++ F++M + G PN YN L+
Sbjct: 1143 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 1192
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 57/257 (22%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V + V Y+ L+ G + GD D +F+E+ VSDG
Sbjct: 1039 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM-------VSDG---------------- 1075
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
V + + N++LD LC NGK ++A+ +F+ ++ P
Sbjct: 1076 ----------------VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP-----T 1114
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N+M +G C G+ +D ++F + PD +++N +I C+ G EA+ L+
Sbjct: 1115 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 1174
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDG-----ATYFRKMVDSGLRPNLAVYNRLVGK 238
EM + G P+ Y L+ A R+ DG A ++M G + + LV
Sbjct: 1175 EMKEDGTLPNSGCYNTLIRA-----RLRDGDREASAELIKEMRSCGFAGDASTIG-LVTN 1228
Query: 239 LVQVGMLDEAKSFFDIM 255
++ G LD KSF D++
Sbjct: 1229 MLHDGRLD--KSFLDML 1243
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 10/206 (4%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV--NLGSFNVMADGYCGQGRF 140
S V N +L A+ K+D + L +M+ L + +L +FN++ + +C +
Sbjct: 187 SIVDFNRLLSAIVKLKKYDVVISLGKKME-------VLGIRNDLYTFNIVINCFCCCFQV 239
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
A+ + KM + PD ++ +L++ C+ +++A L +M + G PD Y +
Sbjct: 240 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 299
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML-DEAKSFFDIMVKKL 259
+D+ + RV+D +F+++ G+RPN+ Y LV L D A+ D++ KK+
Sbjct: 300 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 359
Query: 260 KMDDASYKFMMKALSDGGKLDEILEI 285
+ +Y ++ A GK+ E E+
Sbjct: 360 TPNVITYSALLDAFVKNGKVLEAKEL 385
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 159/402 (39%), Gaps = 88/402 (21%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE----KLGGVVSDG-------VVYG 51
+KG D V Y+ +M G G V L+ ++K+ K +SDG ++
Sbjct: 566 LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKK 625
Query: 52 SLMKGY-------FMKGMEEEAMEC-----------YNEAVGEN--SSVKM--------- 82
L GY G+ ++A+ Y E + N S +K+
Sbjct: 626 MLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGE 685
Query: 83 --------SAVANNSVLDALCNNGKFDEALKLFDRMKN---EHNP--------------- 116
S + + +L A+ KFD + L ++M+N HN
Sbjct: 686 MVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ 745
Query: 117 -PKRLAV-----------NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
P LAV N+ + + + +GYC R +A+ + +M P+T++FN
Sbjct: 746 LPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 805
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
LI L + +EA L M KG PD TYG++++ + D KM
Sbjct: 806 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 865
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEIL 283
L P + +YN ++ L + +D+A + F M K ++ + +Y ++ L + G+ +
Sbjct: 866 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 925
Query: 284 EIVGGI----LDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
++ + ++ FS + FV KEG+ E KL
Sbjct: 926 RLLSDMIERKINPDVFTFSALIDAFV-----KEGKLVEAEKL 962
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 42/225 (18%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ DAI++F M + R P + FN L+ + K L +M G+ D YT+
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227
Query: 199 LLMD---ACFEV--------------------------------NRVDDGATYFRKMVDS 223
++++ CF+V NRV D + KMV+
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
G +P++ YN ++ L + +++A FF +I K ++ + +Y ++ L + + +
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347
Query: 283 LEIVGGI----LDDGGIEFSEELQEFVKGELSKEGRE--EEVVKL 321
++ + + I +S L FVK E +E EE+V++
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 392
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/378 (18%), Positives = 140/378 (37%), Gaps = 57/378 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ G +G+ + +FE+++++ + D V Y ++++G G E
Sbjct: 498 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL--DIVTYTTVIRGMCKTGKVE 555
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + +K V +++ LC G E L+ +MK E ++
Sbjct: 556 EAWSLFCSL--SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 613
Query: 125 GSFNVMAD--------------------GYCGQG-------------------------- 138
G + A+ G C +
Sbjct: 614 GDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSE 673
Query: 139 -RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
+ DA+ +F +M + R P + F+ L+ + K L +M + G+ + YTY
Sbjct: 674 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 733
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-V 256
+L++ +++ KM+ G PN+ + L+ + EA + D M V
Sbjct: 734 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 793
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKGELSKEGR 314
+ + ++ ++ L K E + ++ ++ G +L + V L K G
Sbjct: 794 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC---QPDLVTYGVVVNGLCKRGD 850
Query: 315 EEEVVKLMEKKEREKAEA 332
+ L+ K E+ K E
Sbjct: 851 TDLAFNLLNKMEQGKLEP 868
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 144/307 (46%), Gaps = 27/307 (8%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D VY+ L+ F + G + F+E++ G + V Y +L+ Y
Sbjct: 252 GIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERD--GCAPNVVTYTALIHAYLKSRKVS 309
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH---------- 114
+A E Y + + + + V +++D LC GK ++A +++ MK E+
Sbjct: 310 KANEVYEMMLSKGCTPNI--VTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHF 367
Query: 115 -------NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
N P N+ ++ + DG C + K+A ++ + M C P+ + ++ LID
Sbjct: 368 RVVDGASNEP-----NVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALID 422
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
CK G L EA+E++ M + G +P+ YTY L+D F+ R+D KM+++ P
Sbjct: 423 GCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAP 482
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
N+ +Y ++ L +VG DEA +M +K + +Y M+ G++++ LE++
Sbjct: 483 NVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELL 542
Query: 287 GGILDDG 293
+ G
Sbjct: 543 QQMSSKG 549
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 22/270 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK--------LGGVVSDGV---- 48
M KG + V Y+ L+ G + G + ++++ +K++ + V DG
Sbjct: 318 MLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEP 377
Query: 49 ---VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK 105
YG+L+ G +EA + E + + V ++++D C GK DEA +
Sbjct: 378 NVFTYGALVDGLCKAYQVKEARDLLKSMSVEGC--EPNHVVYDALIDGCCKAGKLDEAQE 435
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
+F M P N+ +++ + D R A++V KM E C+P+ + + +
Sbjct: 436 VFTTMLECGYDP-----NVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEM 490
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
ID LCK G EA +L M +KG NP+ TY ++D + RV+ ++M G
Sbjct: 491 IDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGC 550
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
PN Y L+ G+LDEA + M
Sbjct: 551 APNFVTYRVLINHCCSTGLLDEAHKLLEEM 580
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 126/274 (45%), Gaps = 15/274 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G P +++ L+ + R GD ++L +++ + G VVY L+ G +
Sbjct: 103 MITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQ--CGCQPGYVVYNILIGG--IC 158
Query: 61 GMEE---EAMECYNEAVGE--NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
EE + ++ +A GE + V ++ V ++ LC GKF++A + M ++
Sbjct: 159 SSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGF 218
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P + +++ + C + + A ++F++M +PD + LID CK G +
Sbjct: 219 IP-----DTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFI 273
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+A + EM G P+ TY L+ A + +V + M+ G PN+ Y L
Sbjct: 274 EQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTAL 333
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+ L + G +++A + IM K+ +++ D F
Sbjct: 334 IDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHF 367
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 138/320 (43%), Gaps = 48/320 (15%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGK 99
G + VVY +L+ G G +EA E + + G + +V +S++D L + +
Sbjct: 409 GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNV----YTYSSLIDRLFKDKR 464
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
D ALK+ +M P N+ + M DG C G+ +A ++ M E C+P+
Sbjct: 465 LDLALKVLSKMLENSCAP-----NVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNV 519
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA----- 214
+++ +ID K+G + + EL +MS KG P+ TY +L++ C +D+
Sbjct: 520 VTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEE 579
Query: 215 ---TY-------FRKMVDSGLR------------------PNLAVYNRLVGKLVQVGMLD 246
TY +RK+++ R P VY L+ ++ G L+
Sbjct: 580 MKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLE 639
Query: 247 EAKSFFDIMVKKLKMDDAS---YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
A + + A+ + +++ LS K D+ E+ ++ G I L
Sbjct: 640 IALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVH 699
Query: 304 FVKGELSKEGREEEVVKLME 323
+KG L + R EE ++L++
Sbjct: 700 LIKG-LLRVNRWEEALQLLD 718
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 15/242 (6%)
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+LC +GK+ EAL L + K E P L + M G C F++A++ +M
Sbjct: 18 HSLCKSGKWREALSLLE--KEEFVPDTVL------YTKMISGLCEASLFEEAMDFLTRMR 69
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
C P+ L++ L+ L + + M +G P + L+ A
Sbjct: 70 ASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYA 129
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQV-----GMLDEA-KSFFDIMVKKLKMDDAS 265
+KMV G +P VYN L+G + +LD A K++ +++ + ++ +
Sbjct: 130 YAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVN 189
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKK 325
+ L GK ++ ++ ++ G I + + + G L + E+ +L ++
Sbjct: 190 ISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVI-GYLCNASKVEKAFQLFQEM 248
Query: 326 ER 327
+R
Sbjct: 249 KR 250
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 6/135 (4%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
LG F A C G++++A+ + K E+ PDT+ + +I LC+ + EA +
Sbjct: 12 TLGCF---AHSLCKSGKWREALSLLEK-EEF--VPDTVLYTKMISGLCEASLFEEAMDFL 65
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M P+ TY +L+ C ++ M+ G P+ ++N LV +
Sbjct: 66 TRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRS 125
Query: 243 GMLDEAKSFFDIMVK 257
G A MV+
Sbjct: 126 GDYAYAYKLLKKMVQ 140
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/287 (18%), Positives = 106/287 (36%), Gaps = 52/287 (18%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V ++ LC F+EA+ RM+ P N+ ++ ++ G + +
Sbjct: 42 TVLYTKMISGLCEASLFEEAMDFLTRMRASSCLP-----NVLTYRILLCGCLNKEKLGRC 96
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD---------- 193
+ M C P FN+L+ C++G A A +L +M G P
Sbjct: 97 KRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGG 156
Query: 194 ---------------EYTYGLLMDACFEVNRVD---------------DGATYFRKMVDS 223
E YG +++A +N+V+ R+M+
Sbjct: 157 ICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSK 216
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEI 282
G P+ + Y++++G L +++A F M + + D Y ++ + G +++
Sbjct: 217 GFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQA 276
Query: 283 LEIVGGILDDGG----IEFSEELQEFVKGELSKEGREEEVVKLMEKK 325
+ DG + ++ + ++K K + EV ++M K
Sbjct: 277 RNWFDEMERDGCAPNVVTYTALIHAYLKSR--KVSKANEVYEMMLSK 321
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 135/282 (47%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ G+ + G +F E+ ++ G+V D V + SL+
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR--GLVPDVVTFTSLIHATCKA 306
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A+ + ++M+ V +++D C G D+AL + M+ P
Sbjct: 307 GNLEQAVALVAQM--RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP--- 361
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +N + +GYC GR A E+ R+M R PD ++++ +I CK G L A +
Sbjct: 362 --SVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M KGV PD TY L+ E R++D F M+ G++P+ Y L+
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDE 281
+ G +++A S D M++K + D +Y ++ LS + E
Sbjct: 480 KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 140/320 (43%), Gaps = 45/320 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ L+ F R G+ DG R+ ++E+ G + V + S++ G
Sbjct: 182 GCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREE-GNAKPNLVTFNSMVNG-------- 232
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
LC G+ + A K+FD M E P ++
Sbjct: 233 -----------------------------LCKAGRMEGARKVFDEMVREGLAP-----DV 258
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S+N + GYC G +++ VF +M + PD ++F +LI CK G L +A L +
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++G+ +E T+ L+D + +DD +M G++P++ YN L+ ++G
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Query: 245 LDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+D A+ M K++K D +Y ++ G LD ++ +L G + +
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438
Query: 304 FVKGELSKEGREEEVVKLME 323
++G L +E R + +L E
Sbjct: 439 LIRG-LCEEKRLNDACELFE 457
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 135/275 (49%), Gaps = 10/275 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D V ++ L+ + G+ + L +++E+ G+ + V + +L+ G+ K
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER--GLRMNEVTFTALIDGFCKK 341
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ E ++ S V N++++ C G+ D A +L M+ KR+
Sbjct: 342 GFLDDALLAVEEM--RKCGIQPSVVCYNALINGYCKLGRMDLARELIREME-----AKRV 394
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + GYC G A ++ +KM + PD +++++LI LC+ L +A E
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M GV PDE+TY L+D + V+ + +M+ G+ P++ Y+ L+ L
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514
Query: 241 QVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALS 274
+ EA + F + + D+ Y +M S
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS 549
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 121/271 (44%), Gaps = 24/271 (8%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V YS ++ G+ + G+ D F+L +++ +K GV+ D + Y SL++G + +A E
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKK--GVLPDAITYSSLIRGLCEEKRLNDACE 454
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + V+ +++D C G ++AL L D M + P ++ +++
Sbjct: 455 LFENML--QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP-----DVVTYS 507
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL---------------IDQLCKNG 173
V+ +G R K+A + K+ PD + ++ L + C G
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
++ EA+++Y M D+ D Y +L+ V ++ ++M+ SG PN
Sbjct: 568 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 627
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA 264
LV L + GM+ EA + ++ + DA
Sbjct: 628 SLVRGLFEEGMVVEADNAIQDLLTCCPLADA 658
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+P ++N ++ L + L A M GV P+ YTY +L+ A R+++
Sbjct: 115 APSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVG 173
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMMKAL 273
M +G PN YN LV + G LD A+ +M ++ K + ++ M+ L
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGL 233
Query: 274 SDGGKLD 280
G+++
Sbjct: 234 CKAGRME 240
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 144/287 (50%), Gaps = 12/287 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V+SY L+ G + S L + + + G D V Y +++ G+F +G ++A
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGS 126
Y+E + + + + V +S++ ALC D+A+++ M KN P N +
Sbjct: 220 GTYHEML--DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP------NCRT 271
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + GYC G+ K+AI +KM PD +++N+L+D LCKNG EA +++ M+
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+G+ P+ TYG L+ + + MV +G+ PN V++ L+ + G +D
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
+A F M ++ L D +Y ++ L G++++ + ++D+
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 9/252 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + V YS ++ + D + + + GV+ + Y S++ GY
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN--GVMPNCRTYNSIVHGYCSS 282
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + + V+ V NS++D LC NG+ EA K+FD M P+
Sbjct: 283 GQPKEAIGFLKKM--HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE-- 338
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ + GY +G + + M P+ F+ LI K G + +A
Sbjct: 339 ---ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M +G+NPD TYG ++ + RV+D YF +M+D L P VYN L+ L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 241 QVGMLDEAKSFF 252
D+AK +F
Sbjct: 456 IFDKWDKAKDYF 467
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 5/207 (2%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G C R DA++ V R+M + C P+ S+N L+ LC EA EL
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187
Query: 185 MSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M D G PD +Y +++ F+ +D + +M+D G+ PN+ Y+ ++ L +
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+D+A MVK M + +Y ++ G+ E + + + D G+E
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD-GVEPDVVT 306
Query: 302 QEFVKGELSKEGREEEVVKLMEKKERE 328
+ L K GR E K+ + +
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKR 333
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V P+ TYG+L+ +C R+D G ++ G R + +
Sbjct: 70 AAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAF 129
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLKM-----DDASYKFMMKALSDGGKLDEILEIVG 287
L+ L +A DI+++++ + SY ++K L D + E LE++
Sbjct: 130 TPLLKGLCADKRTSDA---MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQ 186
Query: 288 GILDDGG------IEFSEELQEFVK-GELSK 311
+ DDGG + ++ + F K G+L K
Sbjct: 187 MMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 146/319 (45%), Gaps = 35/319 (10%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V+Y+ ++ G +D F L+ E+ EK V + V Y SL+ G+ + G ++A
Sbjct: 187 PDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEK--RVFPNVVTYTSLIYGFCIVGQLDKAF 244
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN---- 123
NE V +N V + N+++D LC GK EA L M E P N
Sbjct: 245 GLLNEMVLKN--VNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMD 302
Query: 124 --------------------------LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
+ S++VM G +A+++F M P
Sbjct: 303 GYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIP 362
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
D +++++LID LCK+G + A + EM D+G P+ TY L+DA + ++VD
Sbjct: 363 DVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALL 422
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDG 276
+K+ D G++ N+ YN LV L + G L +A+ F D+++K +D +Y M+ L
Sbjct: 423 KKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKE 482
Query: 277 GKLDEILEIVGGILDDGGI 295
DE L ++ + D G +
Sbjct: 483 SLFDEALTLLSKMEDKGCV 501
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 15/259 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGF--VRD-GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G D Y+ LM G+ V++ G + VF + ++ GV D Y ++ G
Sbjct: 285 MMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQM-----GVTCDVHSYSVMISGL 339
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
M +EAM+ + EN V VA +S++D LC +G+ + ALK D M + PP
Sbjct: 340 SKMKMLDEAMDLFEGMRNEN--VIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPP 397
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
N+ ++ + D C + AI + +K+ + + ++N L+D LCK+G L +
Sbjct: 398 -----NVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTD 452
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A++++ ++ KG N D TY ++++ + + D+ T KM D G P+ Y ++
Sbjct: 453 AQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIIN 512
Query: 238 KLVQVGMLDEAKSFFDIMV 256
+ M D+A+ M+
Sbjct: 513 AFFEKDMNDKAEKLLREMI 531
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 162/385 (42%), Gaps = 50/385 (12%)
Query: 10 PVVYSYLMLG-FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
P++ +LG V+ V LF+ ++ L G+ S+ + L+ Y A
Sbjct: 48 PIIKFGKILGSLVKTKHYPIVIHLFQRME--LHGIQSNYITLNILINSYCHLRQINSAFS 105
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + + + + +++ LC NG+ E+L DR+ ++ + ++ S+
Sbjct: 106 VFAKIL--KLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ-----GIKLDHVSYG 158
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ +G C G+ A+ + RK+ C PD + +N +ID LCK+ ++ +A +LY EM +K
Sbjct: 159 TLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEK 218
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
V P+ TY L+ V ++D +MV + PN+ +N LV L + G + EA
Sbjct: 219 RVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREA 278
Query: 249 KSFFDIMVKK------------------------------------LKMDDASYKFMMKA 272
KS +M+K+ + D SY M+
Sbjct: 279 KSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISG 338
Query: 273 LSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM-EKKEREKAE 331
LS LDE +++ G+ ++ I + G L K GR +K + E +R +
Sbjct: 339 LSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDG-LCKSGRINSALKYVDEMHDRGQPP 397
Query: 332 AKAREAEAAEAAKRSARA--AIASL 354
+A +S + AIA L
Sbjct: 398 NVITYTSLIDALCKSHQVDKAIALL 422
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D YS ++ G + D LFE ++ + V+ D V Y SL+ G G
Sbjct: 324 GVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNE--NVIPDVVAYSSLIDGLCKSGRIN 381
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ +E + + + S++DALC + + D+A+ L ++K++ + N+
Sbjct: 382 SALKYVDEM--HDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQ-----GIQANM 434
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ DG C GR DA +VF+ + + D ++++ +I+ LCK + EA L +
Sbjct: 435 YTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSK 494
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
M DKG PD Y +++A FE + D R+M+D
Sbjct: 495 MEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMIDC 533
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 161/330 (48%), Gaps = 20/330 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y+ +ML R + D +F + EK G+ + Y L+ G F E
Sbjct: 471 RGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEK--GLKPNNYTYSILIDGCFKNHDE 528
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ +E N+ N ++++ V ++++ LC G+ +A +L M E KR V+
Sbjct: 529 QNVLEVVNQMTSSN--IEVNGVVYQTIINGLCKVGQTSKARELLANMIEE----KRFCVS 582
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N + DG+ +G A+ + +M SP+ +++ +L+D LCKN + +A E+
Sbjct: 583 CMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRD 642
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +KGV D YG L+ + + ++ + F ++++ GL P+ VYN L+ +G
Sbjct: 643 EMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLG 702
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL----DEILEIVG-GILDDGGIEF 297
+ A + M+K L+ D +Y ++ L G L D E+ G++ D
Sbjct: 703 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPD----- 757
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKER 327
E + + LSK+G+ +VVK+ E+ ++
Sbjct: 758 -EIMYTVIVNGLSKKGQFVKVVKMFEEMKK 786
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 127/282 (45%), Gaps = 12/282 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V + L+ G ++ D LF +++ + G + V + L++ +
Sbjct: 329 MVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENE--GPSPNSVTFSVLIERFSKN 386
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A+E Y + E+ + S ++++ K +EALKLFD
Sbjct: 387 GEMEKALEFYKKM--ESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG------ 438
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ N + C QG+ A E+ RKM P+ +S+NN++ C+ + A
Sbjct: 439 LANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLART 498
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M +KG+ P+ YTY +L+D CF+ + + +M S + N VY ++ L
Sbjct: 499 VFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLC 558
Query: 241 QVGMLDEAKSFFDIMV--KKLKMDDASYKFMMKALSDGGKLD 280
+VG +A+ M+ K+ + SY ++ G++D
Sbjct: 559 KVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMD 600
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 126/265 (47%), Gaps = 15/265 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K F + Y+ ++ GF+++G+ D +EE+ G+ + + Y SLM G
Sbjct: 577 KRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCA--NGISPNVITYTSLMDGLCKNNRM 634
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE-HNPPKRLAV 122
++A+E +E +N VK+ A +++ C + A LF + E NP + +
Sbjct: 635 DQALEMRDEM--KNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPV-- 690
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGE--YRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N + G+ G A+++++KM + RC D ++ LID L K G L A +
Sbjct: 691 ----YNSLISGFRNLGNMVAALDLYKKMLKDGLRC--DLGTYTTLIDGLLKEGNLILASD 744
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY EM G+ PDE Y ++++ + + F +M + + PN+ +YN ++
Sbjct: 745 LYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHY 804
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDAS 265
+ G LDEA D M+ K + D +
Sbjct: 805 REGNLDEAFRLHDEMLDKGILPDGA 829
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 9/237 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + Y+ LM G ++ D + +E+K K GV D YG+L+ G+ K
Sbjct: 609 MCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNK--GVKLDIPAYGALIHGFCKK 666
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E A ++E + E + S NS++ N G AL L+ +M + L
Sbjct: 667 SNMESASALFSELLEE--GLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDG-----L 719
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+LG++ + DG +G A +++ +M PD + + +++ L K G + +
Sbjct: 720 RCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVK 779
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
++ EM V P+ Y ++ + +D+ +M+D G+ P+ A ++ LV
Sbjct: 780 MFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 836
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
VN +FN + + Y + A+++ +M E P N + L + + EA+EL
Sbjct: 160 VNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKEL 219
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
Y M GV+ D T LLM A + + F + ++ G P+ +Y+ V +
Sbjct: 220 YSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCK 279
Query: 242 VGMLDEAKSFFDIMVKK 258
L A S M +K
Sbjct: 280 TLNLAMANSLLREMKEK 296
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 108/248 (43%), Gaps = 12/248 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGK 99
GV D LM+ + EA+E ++ A+ G + ++A + A C
Sbjct: 227 GVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLA----VQACCKTLN 282
Query: 100 FDEALKLFDRMKNEHNPPKRLAV-NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
A L MK K+L V + ++ + QG +DAI +M S +
Sbjct: 283 LAMANSLLREMKE-----KKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMN 337
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
++ +LI CKN L A +L+ +M ++G +P+ T+ +L++ + ++ +++
Sbjct: 338 VVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYK 397
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGK 278
KM GL P++ + ++ ++ +EA FD + + ++ L GK
Sbjct: 398 KMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGK 457
Query: 279 LDEILEIV 286
+D+ E++
Sbjct: 458 IDKATELL 465
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 156/357 (43%), Gaps = 27/357 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V ++ LM G +G L + + E+ YG+++ G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEE------GHQPYGTIINGLCKM 54
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A+ ++ E + +K V N+++D LC +G A LF M ++ P
Sbjct: 55 GDTESALNLLSKM--EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFP--- 109
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ M D +C GR+ DA ++ R M E + +PD ++F+ LI+ L K G ++EAEE
Sbjct: 110 --DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEE 167
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+YG+M +G+ P TY ++D + +R++D M P++ ++ L+
Sbjct: 168 IYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC 227
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ +D F M ++ + + +Y ++ G LD +++ ++ G
Sbjct: 228 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYI 287
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLIP 356
Q + L KKE KA A + + +E R +A IP
Sbjct: 288 TFQSMLAS-------------LCSKKELRKAFAILEDLQKSEVCPRIVQAKFKIQIP 331
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 151/329 (45%), Gaps = 11/329 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D + ++ L+ G + L + + ++ G + V YG ++ G +G +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR--GCQPNLVTYGVVVNGLCKRGDID 242
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A N+ E + ++ + V ++V+D+LC D+AL LF M+N+ P N+
Sbjct: 243 LAFNLLNKM--EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP-----NV 295
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + C R+ DA + M E + +P+ ++FN LID K G L EAE+LY E
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + ++PD +TY L++ +R+D+ F M+ PN+ YN L+ +
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+DE F M ++ L + +Y ++ D + ++ DG
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 304 FVKGELSKEGREEEVVKLMEKKEREKAEA 332
+ G L K G+ E+ + + E +R K E
Sbjct: 476 LLDG-LCKNGKLEKAMVVFEYLQRSKMEP 503
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 121/242 (50%), Gaps = 9/242 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ L+ FV++G +L++E+ ++ + D Y SL+ G+ M +EA +
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ ++ + V N++++ C + DE ++LF M + L N ++ +
Sbjct: 389 ELMISKDCFP--NVVTYNTLINGFCKAKRIDEGVELFREMSQ-----RGLVGNTVTYTTL 441
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G+ +A VF++M P+ +++N L+D LCKNG L +A ++ + +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P YTY ++++ + +V+DG F + G++P++ +YN ++ + G+ +EA +
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 251 FF 252
F
Sbjct: 562 LF 563
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 9/196 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + V Y+ L+ GF + D LF E+ ++ G+V + V Y +L+ G+F
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR--GLVGNTVTYTTLIHGFFQA 448
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ A + + V + V + + N++LD LC NGK ++A+ +F+ ++ P
Sbjct: 449 RDCDNAQMVFKQMVSD--GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP--- 503
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++N+M +G C G+ +D ++F + PD + +N +I C+ G+ EA+
Sbjct: 504 --TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 181 LYGEMSDKGVNPDEYT 196
L+ +M + G PD T
Sbjct: 562 LFRKMREDGPLPDSGT 577
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV--NLGSFNVMADGYCGQGRFKDAIE 145
N +L A+ KFD + L ++M+ RL + NL ++N++ + +C + + A+
Sbjct: 89 NKLLSAIAKMKKFDLVISLGEKMQ-------RLGISHNLYTYNILINCFCRRSQISLALA 141
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+ KM + P ++ ++L++ C +++A L +M + G PD T+ L+ F
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
N+ + +MV G +PNL Y +V L + G +D A + + M
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 19/241 (7%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +++ C + AL L +M P V L S + +GYC R DA+ +
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPS--IVTLSS---LLNGYCHGKRISDAVALV 178
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M E PDT++F LI L + +EA L M +G P+ TYG++++ +
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+D KM + + N+ +Y+ ++ L + D+A + F M K ++ + +Y
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 267 KFMMKAL------SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
++ L SD +L + +++ ++ + F+ + FV KEG+ E K
Sbjct: 299 SSLISCLCNYERWSDASRL--LSDMIERKINPNVVTFNALIDAFV-----KEGKLVEAEK 351
Query: 321 L 321
L
Sbjct: 352 L 352
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 94/229 (41%), Gaps = 7/229 (3%)
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
K D+A+ LF M P ++ FN + +F I + KM S +
Sbjct: 65 KLDDAIGLFGGMVKSRPLP-----SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHN 119
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
++N LI+ C+ ++ A L G+M G P T L++ R+ D
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
+MV+ G RP+ + L+ L EA + D MV++ + + +Y ++ L G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 278 KLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
+D ++ ++ IE + + V L K E++ + L + E
Sbjct: 240 DIDLAFNLLNK-MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g19290
gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 145/306 (47%), Gaps = 11/306 (3%)
Query: 5 GFVADPVVY--SYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
F P V+ S ++ + R G+ D +E + LG + + V Y SL+ GY M G
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLG-LELNVVTYNSLINGYAMIG- 275
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+ E M + E V + V S++ C G +EA +F+ +K K+L
Sbjct: 276 DVEGMTRVLRLMSERG-VSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKE-----KKLVA 329
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ + V+ DGYC G+ +DA+ V M E +T N+LI+ CK+G L EAE+++
Sbjct: 330 DQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIF 389
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M+D + PD +TY L+D VD+ +M + P + YN L+ ++
Sbjct: 390 SRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRI 449
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G + S + +M+K+ + D+ S +++AL G +E +++ +L G + + L
Sbjct: 450 GAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITL 509
Query: 302 QEFVKG 307
+ G
Sbjct: 510 NVMISG 515
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 134/279 (48%), Gaps = 10/279 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y+ L+ G+ + G + +FE LKEK +V+D +YG LM GY G
Sbjct: 290 RGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEK--KLVADQHMYGVLMDGYCRTGQI 347
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A+ ++ + V+ + NS+++ C +G+ EA ++F RM + P
Sbjct: 348 RDAVRVHDNMI--EIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH---- 401
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + DGYC G +A+++ +M + P +++N L+ + G + L+
Sbjct: 402 -HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +GVN DE + L++A F++ ++ + ++ GL + N ++ L ++
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 244 MLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDE 281
++EAK D + + + K +Y+ + G L E
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 150/323 (46%), Gaps = 11/323 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D Y+ L+ G+ R G D +L +++ +K VV + Y L+KGY G + +
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQK--EVVPTVMTYNILLKGYSRIGAFHDVLS 457
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + V ++ +++L+AL G F+EA+KL+ E+ + L + + N
Sbjct: 458 LWKMML--KRGVNADEISCSTLLEALFKLGDFNEAMKLW-----ENVLARGLLTDTITLN 510
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
VM G C + +A E+ + +RC P ++ L K G L EA + M K
Sbjct: 511 VMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERK 570
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ P Y L+ F+ ++ A ++ GL P +A Y L+ +GM+D+A
Sbjct: 571 GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD-DGGIEFSEELQEFVK 306
+ F+++ K + ++ + +L K+DE ++ I+D D + + L+EF++
Sbjct: 631 YATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLE 690
Query: 307 GELSKEGREEEVVKLMEKKEREK 329
+ + +++ + +E +K
Sbjct: 691 ASATTCLKTQKIAESVENSTPKK 713
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 38/289 (13%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG +Y+ L+ G + + V L EL+ + G+ YG+L+ G+ GM
Sbjct: 570 KGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR--GLTPTVATYGALITGWCNIGMI 627
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN----------- 112
++A E + + ++ ++ + + ++L K DEA L ++ +
Sbjct: 628 DKAYATCFEMIEKGITLNVNICS--KIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSL 685
Query: 113 ---------------------EHNPPKRLAV-NLGSFNVMADGYCGQGRFKDAIEVFRKM 150
E++ PK+L V N +NV G C G+ +DA ++F +
Sbjct: 686 KEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL 745
Query: 151 -GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
R PD ++ LI G + +A L EM+ KG+ P+ TY L+ ++
Sbjct: 746 LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGN 805
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
VD K+ G+ PN YN L+ LV+ G + EA + M++K
Sbjct: 806 VDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEK 854
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 53 LMKGY--FMKGMEEEAMECYN-----EAVGENSSVKMSAVANNSVLDA----LCNNGKFD 101
L+ GY + +E A C E+V ENS+ K V NN V + LC GK +
Sbjct: 678 LLPGYQSLKEFLEASATTCLKTQKIAESV-ENSTPKKLLVPNNIVYNVAIAGLCKAGKLE 736
Query: 102 EALKLF-DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
+A KLF D + ++ P ++ ++ G G A + +M P+ +
Sbjct: 737 DARKLFSDLLSSDRFIPDEY-----TYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIV 791
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N LI LCK G + A+ L ++ KG+ P+ TY L+D + V + KM
Sbjct: 792 TYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 851
Query: 221 VDSGL 225
++ GL
Sbjct: 852 IEKGL 856
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 7/226 (3%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
+ E V S + +L G AL +FD M N P L+ N N+
Sbjct: 141 WGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM-SDK 188
+ +G A+ V+ +M + SPD + + +++ C++G + +A E S
Sbjct: 201 VR-----KGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSL 255
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ + TY L++ + V+ R M + G+ N+ Y L+ + G+++EA
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 249 KSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ F+++ KKL D Y +M G++ + + + +++ G
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 361
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 158/350 (45%), Gaps = 71/350 (20%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDS-DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
M KGFV D YS + +GF+ D + F LFEE+K+ G+V Y L+ +
Sbjct: 444 MMSKGFVPDDSTYSKV-IGFLCDASKVEKAFLLFEEMKK--NGIVPSVYTYTILIDSFCK 500
Query: 60 KGMEEEAMECYNEAVGENSSV---------------------------------KMSAVA 86
G+ ++A ++E + +N + K + V
Sbjct: 501 AGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVT 560
Query: 87 NNSVLDALCNNGKFDEALKLFDRMK----------------NEHNPPKRLAVNLGSFNVM 130
+++D C G+ D+A +++ RM+ N+ P N+ ++ +
Sbjct: 561 YTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETP-----NIITYGAL 615
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DG C R ++A E+ M C P+ + ++ LID CK G L A+E++ +MS++G
Sbjct: 616 VDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGY 675
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ YTY L+++ F+ R+D KM+++ PN+ +Y ++ L +VG +EA
Sbjct: 676 CPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEA-- 733
Query: 251 FFDIMVKKLKMDDA-------SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ +M LKM++ +Y M+ GK+++ LE+ + G
Sbjct: 734 -YRLM---LKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKG 779
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 150/354 (42%), Gaps = 35/354 (9%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGV--------------VSD 46
M ++G + V Y+ L+ G + G D +++ ++ + +
Sbjct: 549 MLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPN 608
Query: 47 GVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKL 106
+ YG+L+ G EEA E + + + + + ++++D C GK + A ++
Sbjct: 609 IITYGALVDGLCKANRVEEAHELLDTM--SVNGCEPNQIVYDALIDGFCKTGKLENAQEV 666
Query: 107 FDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
F +M P NL +++ + + + R ++V KM E C+P+ + + ++I
Sbjct: 667 FVKMSERGYCP-----NLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMI 721
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
D LCK G EA L +M + G P+ TY ++D ++ +++ +R M G
Sbjct: 722 DGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCA 781
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK-----FMMKALSDGGKLD 280
PN Y L+ G+LDEA D M + +SY+ F + ++ G LD
Sbjct: 782 PNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLD 841
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKA 334
E+ E + + E L + K GR E + L+E+ + A A
Sbjct: 842 ELSE-------NESVPV-ESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVA 887
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 150/325 (46%), Gaps = 17/325 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V G + +VY L+ GF + G + +F ++ E+ G + Y SL+ F +
Sbjct: 635 MSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSER--GYCPNLYTYSSLINSLFKE 692
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ ++ ++ + ENS + V ++D LC GK +EA +L +M+ P
Sbjct: 693 KRLDLVLKVLSKML-ENSCTP-NVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYP--- 747
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ M DG+ G+ + +E++R M C+P+ +++ LI+ C G+L EA
Sbjct: 748 --NVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHR 805
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNR-VDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L EM +Y +++ NR ++ ++ P ++Y L+
Sbjct: 806 LLDEMKQTYWPRHISSYRKIIEG---FNREFITSIGLLDELSENESVPVESLYRILIDNF 862
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDDAS---YKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
++ G L+ A + + + + A+ Y ++++LS K+D+ E+ +++ +
Sbjct: 863 IKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVP 922
Query: 297 FSEELQEFVKGELSKEGREEEVVKL 321
+KG L++ G+ +E ++L
Sbjct: 923 ELSTFVHLIKG-LTRVGKWQEALQL 946
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 120/324 (37%), Gaps = 78/324 (24%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A P Y+ L+ F+R D F + E+ G DG G G
Sbjct: 200 GYKASPTTYNALIQVFLRADKLDTAFLVHREMSN--SGFRMDGCTLGCFAYSLCKAGRCG 257
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------- 117
+A+ ++ E V N ++ LC F EA+ + DRM++ P
Sbjct: 258 DAL-----SLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRI 312
Query: 118 --------------KRLA---------VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
KR+ N FN + YC + A ++F+KM +
Sbjct: 313 LLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCG 372
Query: 155 CSPDTLSFNNLIDQLCKN------GMLAEAEELYGEMSD--------------------- 187
C P L +N I +C N +L AE+ Y EM D
Sbjct: 373 CQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAG 432
Query: 188 --------------KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
KG PD+ TY ++ + ++V+ F +M +G+ P++ Y
Sbjct: 433 KFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYT 492
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVK 257
L+ + G++ +A+++FD M++
Sbjct: 493 ILIDSFCKAGLIQQARNWFDEMLR 516
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 121/273 (44%), Gaps = 13/273 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG---GVVSDGVVYGSLMKGY 57
M +G + +++ L+ + + D ++LF+++ K G G + + GS+
Sbjct: 333 MMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMI-KCGCQPGYLLYNIFIGSICSNE 391
Query: 58 FMKG--MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
+ G + E A + Y+E + + V ++ V ++ LC GKFD+A ++ M ++
Sbjct: 392 ELPGSDLLELAEKAYSEML--DLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGF 449
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P +++ + C + + A +F +M + P ++ LID CK G++
Sbjct: 450 VPDD-----STYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLI 504
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+A + EM P+ TY L+ A + +V D F M+ G +PN+ Y L
Sbjct: 505 QQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTAL 564
Query: 236 VGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKF 268
+ + G +D+A + M ++ D F
Sbjct: 565 IDGHCKAGQIDKACQIYARMQGDIESSDIDMYF 597
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 113/249 (45%), Gaps = 13/249 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+Y+ ++ G + G ++ +RL +++E G + + Y +++ G+ G E+ +E Y
Sbjct: 715 VIYTDMIDGLCKVGKTEEAYRLMLKMEEV--GCYPNVITYTAMIDGFGKIGKIEQCLELY 772
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + + +++ C+ G DEA +L D MK + P ++ S+ +
Sbjct: 773 RDMCSKGCAPNF--ITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPR-----HISSYRKI 825
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG- 189
+G+ F +I + ++ E P + LID K G L A L E+S
Sbjct: 826 IEGF--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPS 883
Query: 190 -VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
++Y Y L+++ ++VD + M++ + P L+ + L+ L +VG EA
Sbjct: 884 LAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEA 943
Query: 249 KSFFDIMVK 257
D + +
Sbjct: 944 LQLSDSICQ 952
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 130/336 (38%), Gaps = 53/336 (15%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-----GVVSDGVVYGSLMKGYFMK 60
FV D V Y+ ++ G LF+E + L + + V Y L+ G K
Sbjct: 268 FVPDTVFYNRMVSGLCEAS-------LFQEAMDILDRMRSISCIPNVVTYRILLSGCLGK 320
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM---------- 110
G + + E NS++ A C + + A KLF +M
Sbjct: 321 GQLGRCKRILSMMMTEGCYPNREMF--NSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 378
Query: 111 ----------KNEHNPPKRL--------------AVNLGSFNV--MADGYCGQGRFKDAI 144
NE P L V L NV A CG G+F A
Sbjct: 379 LYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAF 438
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
E+ +M PD +++ +I LC + +A L+ EM G+ P YTY +L+D+
Sbjct: 439 EIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSF 498
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
+ + +F +M+ PN+ Y L+ ++ + +A F++M+ + K +
Sbjct: 499 CKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNV 558
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+Y ++ G++D+ +I + G IE S+
Sbjct: 559 VTYTALIDGHCKAGQIDKACQIYARM--QGDIESSD 592
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 125/312 (40%), Gaps = 37/312 (11%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEK-------------LG-----GVVSDGVVY 50
D V + +LM +RD D + + +L L +K LG G + Y
Sbjct: 151 DRVSHKFLMQ--IRDDDRELLRKLLNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTY 208
Query: 51 GSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM 110
+L++ + + A + E NS +M +LC G+ +AL L +
Sbjct: 209 NALIQVFLRADKLDTAFLVHREM--SNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLE-- 264
Query: 111 KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLC 170
K E P +N M G C F++A+++ +M C P+ +++ L+
Sbjct: 265 KEEFVPDTVF------YNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCL 318
Query: 171 KNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
G L + + M +G P+ + L+ A + F+KM+ G +P
Sbjct: 319 GKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 378
Query: 231 VYNRLVGKLVQ------VGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEIL 283
+YN +G + +L+ A K++ +++ + ++ + + L GK D+
Sbjct: 379 LYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAF 438
Query: 284 EIVGGILDDGGI 295
EI+ ++ G +
Sbjct: 439 EIICEMMSKGFV 450
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 153/324 (47%), Gaps = 11/324 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ GF ++GDSD + + E+ ++ + D V Y S++ +
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR--RISPDVVTYSSIIAALCKGQAMD 248
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+AME V + V + + NS+L C++ + EA+ +M+++ P ++
Sbjct: 249 KAMEVLTTMV--KNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEP-----DV 301
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + D C GR +A ++F M + PD ++ L+ G L E L
Sbjct: 302 VTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDL 361
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G++PD + + +L+ A + +VD+ F KM GL PN+ Y ++G L + G
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+D+A +F+ M+ + L + Y ++ +L K D+ E++ +LD GI +
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR-GICLNTIFFN 480
Query: 304 FVKGELSKEGREEEVVKLMEKKER 327
+ KEGR E KL + R
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVR 504
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 150/319 (47%), Gaps = 13/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V++ L+ + + D +F ++++ G+ + V YG+++
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQH--GLNPNVVTYGAVIGILCKS 419
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++AM + + + E + + + S++ +LC K+D+A +L M + + +
Sbjct: 420 GSVDDAMLYFEQMIDEGLTPNI--IVYTSLIHSLCIFDKWDKAEELILEMLD-----RGI 472
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N FN + +C +GR ++ ++F M P+ ++++ LID C G + EA +
Sbjct: 473 CLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATK 532
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G+ PD TY L++ V+R+DD F++MV SG+ PN+ YN ++ L
Sbjct: 533 LLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 592
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI-LDDGGIEFS 298
AK + + K +++ ++Y ++ L DE L + + L D ++
Sbjct: 593 HTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD--LQLE 650
Query: 299 EELQEFVKGELSKEGREEE 317
+ G L K GR +E
Sbjct: 651 TRTFNIMIGALLKVGRNDE 669
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 152/322 (47%), Gaps = 21/322 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + +VY+ L+ D L E+ ++ G+ + + + S++ + +
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR--GICLNTIFFNSIIHSHCKE 489
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+ + ++ V VK + + ++++D C GK DEA KL M + P
Sbjct: 490 GRVIESEKLFDLMV--RIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP--- 544
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++N + +GYC R DA+ +F++M SP+ +++N ++ L A A+E
Sbjct: 545 --DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY ++ G + TY +++ + N D+ F+ + + L+ +N ++G L+
Sbjct: 603 LYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 662
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEI------LEIVGGILDDG 293
+VG DEAK F L + +Y+ M + + G L+E+ +E G +D G
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSG 722
Query: 294 GIEF--SEELQEFVKGELSKEG 313
+ F E LQ +GE+++ G
Sbjct: 723 MLNFIVRELLQ---RGEITRAG 741
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 137/316 (43%), Gaps = 44/316 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G + + ++ ++ ++G +S+ +F L + GV + + Y +L+ GY
Sbjct: 467 MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI-----GVKPNVITYSTLIDGY 521
Query: 58 FMKGMEEEAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
+ G +EA + + +VG +K V N++++ C + D+AL LF M +
Sbjct: 522 CLAGKMDEATKLLSSMFSVG----MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGV 577
Query: 116 PPKRLAVN------------------------------LGSFNVMADGYCGQGRFKDAIE 145
P + N L ++N++ G C +A+
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+F+ + +T +FN +I L K G EA++L+ S G+ P+ +TY L+ +
Sbjct: 638 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 697
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS 265
+++ F M D+G + + N +V +L+Q G + A ++ ++ +K +AS
Sbjct: 698 GQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAS 757
Query: 266 YKFMMKALSDGGKLDE 281
+ L GGK E
Sbjct: 758 TASLFIDLLSGGKYQE 773
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 6/211 (2%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G C R DA++ V R+M E C PD S L+ LC EA EL
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHM 183
Query: 185 MSDK---GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M+D G PD +Y +++ F+ D + + +M+D + P++ Y+ ++ L +
Sbjct: 184 MADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCK 243
Query: 242 VGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+D+A MVK M + +Y ++ + E + + + D G+E
Sbjct: 244 GQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSD-GVEPDVV 302
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKAE 331
+ L K GR E K+ + + E
Sbjct: 303 TYNSLMDYLCKNGRSTEARKIFDSMTKRGLE 333
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 11/127 (8%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V P +TYG+L+ C R+D G +V G R +
Sbjct: 66 AAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITF 125
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLK----MDDA-SYKFMMKALSDGGKLDEILEIVG 287
L+ L +A DI+++++ M D S ++K L D + E LE++
Sbjct: 126 TPLLKGLCADKRTSDA---MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLH 182
Query: 288 GILDDGG 294
+ DD G
Sbjct: 183 MMADDRG 189
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 160/353 (45%), Gaps = 30/353 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V + V YS L+ G + G D L +E+ K V+ + + Y S + G +
Sbjct: 142 MSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ 201
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEA----------------- 103
M EA E + V V ++++D LC G+ DEA
Sbjct: 202 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTY 261
Query: 104 ------LKLFDRMKNEHN-----PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
L D+M+ H K + ++ +++V+ D +C R +A+E+ M
Sbjct: 262 NALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS 321
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
C+P+ ++FN++ID LCK+ EA ++ ++ ++ + PD+ T+ +L+ + +
Sbjct: 322 RGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQ 381
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMK 271
+ F +MV ++P++ + L+ L + G ++ A+ D+M + + +Y ++
Sbjct: 382 ASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVH 441
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
L G+++E E + ++ G + S V L + R ++ ++L+ K
Sbjct: 442 GLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYA-LCRASRTDDALQLVSK 493
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 18/298 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D + YS L+ F + D L + + G + V + S++ G
Sbjct: 284 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR--GCTPNVVTFNSIIDGLCKS 341
Query: 61 GMEEEA----MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
EA ++ YN + + V N ++ C G F++A LF+ M ++
Sbjct: 342 DRSGEAFQIALQVYNRMLVPDK------VTFNILIAGACKAGNFEQASALFEEMVAKNMQ 395
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P ++ +F + DG C G+ + A ++ MG P+ +++N L+ LCK+G +
Sbjct: 396 P-----DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIE 450
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
E E EM G P+ TYG L+ A +R DD K+ G P+ YN LV
Sbjct: 451 EPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILV 510
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
L + G ++A + + MV K D+ ++ L G L +E++ +L G
Sbjct: 511 DGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKG 568
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 126/265 (47%), Gaps = 9/265 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V ++ ++ G + S F++ ++ ++ +V D V + L+ G
Sbjct: 319 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM--LVPDKVTFNILIAGACKA 376
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A + E V +N ++ + +++D LC G+ + A + D M N PP
Sbjct: 377 GNFEQASALFEEMVAKN--MQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP--- 431
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++NV+ G C GR ++ E +M C P+++++ +L+ LC+ +A +
Sbjct: 432 --NVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQ 489
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L ++ G +PD TY +L+D ++ + + T +MV G +P+ + G L
Sbjct: 490 LVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLH 549
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDAS 265
+ G L +++ K + DA+
Sbjct: 550 RSGNLAGTMELLRVVLAKGMLPDAT 574
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 13/201 (6%)
Query: 88 NSVLDALCNNGKFDEALKLFD-RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N VL +LC G+ AL++F M + P + ++N + +G C +E+
Sbjct: 49 NIVLQSLCRAGETARALEIFRGEMARDGVAP-----TIVTYNTIINGLCKSNELGAGMEL 103
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F ++ + PD +++N LID LCK G L EA L+G MS +G P+ TY +L++ +
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163
Query: 207 VNRVDDGATYFRKMV--DSGLRPNLAVYNRLVGKLVQVGMLDEA----KSFFDIMVKKLK 260
V R+D+ ++M + PN+ YN + L + M EA +S D + ++
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL-RVS 222
Query: 261 MDDASYKFMMKALSDGGKLDE 281
D ++ ++ L G+ DE
Sbjct: 223 PDTVTFSTLIDGLCKCGQTDE 243
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K D + + L+ G + G + + + + GV + V Y L+ G
Sbjct: 389 MVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL--GVPPNVVTYNVLVHGLCKS 446
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EE E E V +S ++ S++ ALC + D+AL+L ++K+ P +
Sbjct: 447 GRIEEPCEFLEEMV--SSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTV 504
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N++ DG G+ + AI V +M PD+ +F L ++G LA E
Sbjct: 505 -----TYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTME 559
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L + KG+ PD T ++D
Sbjct: 560 LLRVVLAKGMLPDATTCSSILD 581
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 157/364 (43%), Gaps = 49/364 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + D + + L+ GF R G + + E L++ G V D + Y L+ GY
Sbjct: 83 MVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQ--SGAVPDVITYNVLISGYCKS 140
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A++ V + +V V N++L LC++GK +A+++ DR + P
Sbjct: 141 GEIDNALQ-----VLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP--- 192
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ ++ + C + A+++ +M PD +++N LI+ +CK G L EA +
Sbjct: 193 --DVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIK 250
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
M G P+ T+ +++ + R D M+ G P++ +N L+ L
Sbjct: 251 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 310
Query: 241 QVGML-----------------------------------DEAKSFFDIMVKK-LKMDDA 264
+ G+L D A + DIMV + D
Sbjct: 311 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 370
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+Y ++ AL GK+D +EI+ + G + G LSK G+ E +KL+++
Sbjct: 371 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG-LSKVGKTERAIKLLDE 429
Query: 325 KERE 328
R+
Sbjct: 430 MRRK 433
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 128/268 (47%), Gaps = 13/268 (4%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
VR+G+ + F+ E + + G + D + SL++G+ G ++A + + E S
Sbjct: 67 LVRNGELEDGFKFLESMVYR--GDIPDIIPCTSLIRGFCRIGKTKKAT--WVMEILEQSG 122
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ N ++ C +G+ D AL++ DRM +A ++ ++N + C G+
Sbjct: 123 AVPDVITYNVLISGYCKSGEIDNALQVLDRMN--------VAPDVVTYNTILRTLCDSGK 174
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
K A+EV + + C PD +++ LI+ CK + +A +L EM +KG PD TY +
Sbjct: 175 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 234
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG-MLDEAKSFFDIMVKK 258
L++ + R+D+ + M G +PN+ +N ++ + G +D K D++ K
Sbjct: 235 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 294
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIV 286
++ ++ L G L ++I+
Sbjct: 295 CSPSVVTFNILINFLCRQGLLGRAIDIL 322
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 131/285 (45%), Gaps = 10/285 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V Y+ L+ G ++G D + + G + + + +++ G
Sbjct: 223 KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY--GCQPNVITHNIILRSMCSTGRW 280
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + ++ + + S S V N +++ LC G A+ + ++M P L
Sbjct: 281 MDAEKLLSDMLRKGCSP--SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL--- 335
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N + G+C + + AIE M C PD +++N L+ LCK+G + A E+
Sbjct: 336 --SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 393
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++S KG +P TY ++D +V + + +M GL+P++ Y+ LV L + G
Sbjct: 394 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 453
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
+DEA FF D+ ++ + +Y +M L + D ++ +
Sbjct: 454 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 498
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 102/234 (43%), Gaps = 34/234 (14%)
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAV---------------------------- 122
L L NG+ ++ K + M + P +
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 123 --NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++NV+ GYC G +A++V +M +PD +++N ++ LC +G L +A E
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ K PD TY +L++A + + V +M + G +P++ YN L+ +
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G LDEA F + M + + ++ +++++ G+ + +++ +L G
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 294
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 9/190 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ +DG D + +L K G + Y +++ G
Sbjct: 360 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK--GCSPVLITYNTVIDGLSKV 417
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A++ +E +K + +S++ L GK DEA+K F ++ P
Sbjct: 418 GKTERAIKLLDEM--RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRP--- 472
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++N + G C + AI+ M RC P ++ LI+ + G+ EA +
Sbjct: 473 --NAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALD 530
Query: 181 LYGEMSDKGV 190
L E+ +G+
Sbjct: 531 LLNELCSRGL 540
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ G+ + G S +F E+ K G++ D V + SL+
Sbjct: 253 MVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRK--GIMPDVVTFTSLIHVMCKA 310
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A+ E ++M+ + +++D C G D+AL M+ R+
Sbjct: 311 GNLERAVGLVREM--RERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQ-----CRI 363
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +N + +GYC GR +A E+ R+M PD ++++ ++ CKNG A +
Sbjct: 364 QPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQ 423
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M + GV PD TY L+ E R+ D F+ M+ GL+P+ Y L+
Sbjct: 424 LNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHC 483
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDE 281
+ G ++ A S D MVK + D +Y ++ LS + E
Sbjct: 484 KEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKE 525
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 139/325 (42%), Gaps = 46/325 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ + Y+ ++L D R F+ + GV + Y L++ +G +
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSD--GVAPNVYTYNILVRALCGRGHRK 174
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ + G + +AV N+++ A C G+ D A +L D M+ P NL
Sbjct: 175 EALSVLRDMRG--AGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKP-----NL 227
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN + +G C GR +DA +VF +M + +PD +S+N L+ CK G EA ++ E
Sbjct: 228 VTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAE 287
Query: 185 MSDKGVNPD-----------------------------------EYTYGLLMDACFEVNR 209
M+ KG+ PD E T+ L+D +
Sbjct: 288 MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGF 347
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKF 268
+DD R+M ++P++ YN L+ VG +DEA+ M K +K D +Y
Sbjct: 348 LDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYST 407
Query: 269 MMKALSDGGKLDEILEIVGGILDDG 293
++ A G ++ +L++G
Sbjct: 408 ILSAYCKNGDTHSAFQLNQQMLENG 432
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 11/229 (4%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S +A N+VL AL ++ A + FD M ++ P N+ ++N++ CG+G K+
Sbjct: 122 SVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAP-----NVYTYNILVRALCGRGHRKE 175
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ V R M C P+ +++N L+ C+ G + AE L M + G+ P+ T+ +++
Sbjct: 176 ALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVN 235
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMD 262
+ R++D F +MV GL P+ YN LVG +VG EA S F M +K M
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295
Query: 263 D-ASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVK 306
D ++ ++ + G L+ + +V + + G I F+ + F K
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCK 344
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 142/294 (48%), Gaps = 11/294 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + D V ++ L+ + G+ + L E++E+ G+ + + + +L+ G+ K
Sbjct: 288 MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRER--GLQMNEITFTALIDGFCKK 345
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ E ++ S V N++++ C G+ DEA +L M+ + P
Sbjct: 346 GFLDDALLAVREM--RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKP--- 400
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + YC G A ++ ++M E PD +++++LI LC+ L +A
Sbjct: 401 --DVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHV 458
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M G+ PDE TY L+D + V+ + +MV +G+ P++ Y+ L+ L
Sbjct: 459 LFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLS 518
Query: 241 QVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ EA+ F + ++ + Y +M+ + +L +L ++ G G
Sbjct: 519 KSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRN-AELKSVLALLKGFCMKG 571
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 138/313 (44%), Gaps = 33/313 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V YS ++ + ++GD+ F+L +++ E GV+ D + Y SL++ +
Sbjct: 393 MEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLEN--GVLPDAITYSSLIRVLCEE 450
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A + + + ++ V S++D C G + AL L D M P
Sbjct: 451 KRLGDAHVLFKNMI--SLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLP--- 505
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN-------- 172
++ +++V+ +G R K+A + K+ P + ++ L+ + C+N
Sbjct: 506 --DVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALM-RCCRNAELKSVLA 562
Query: 173 --------GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
G++ EA+++Y + D+ N D Y +L+ V ++ ++M+ G
Sbjct: 563 LLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCG 622
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSD----GGKLD 280
PN L+ L + GM+ EA ++ + DA KAL D G +D
Sbjct: 623 FAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEAS---KALIDLNLKEGNVD 679
Query: 281 EILEIVGGILDDG 293
+L+++ G+ DG
Sbjct: 680 AVLDVLHGMARDG 692
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 24/243 (9%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V Y+ L+ G ++G+ + L +E+ + GV+ D V Y L+ G
Sbjct: 463 MISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVK--AGVLPDVVTYSVLINGLSKS 520
Query: 61 GMEEEAMEC-----YNEAVGENSSVKMSAVANN----------SVLDALCNNGKFDEALK 105
+EA + E V N +K A+ ++L C G +EA K
Sbjct: 521 ARTKEAQRLLFKLYHEEPVPAN--IKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADK 578
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
++ + + + ++ ++V+ G+C +G A+ ++M + +P++ S +L
Sbjct: 579 VYQSILD-----RNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISL 633
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
I L + GM+ EA+++ ++ + D L+D + VD M GL
Sbjct: 634 IRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGL 693
Query: 226 RPN 228
P+
Sbjct: 694 LPS 696
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 195 EGFRLKSAMLA--SGVQPDXYTYSVLINGLCKESKMDDANELFDEML-----VKGLVPNG 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C +GR A+E++++M PD +++N LI LCK G L +A +L E
Sbjct: 248 VTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG+ PD+ TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 308 MVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 368 SVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 401
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V +GV + +L+ G+ K
Sbjct: 203 MLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVK--GLVPNGVTFTTLIDGHCKK 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + S+ + N+++ LC G +A L D M + P ++
Sbjct: 261 GRVDLAMEIYKRMLSQ--SLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKI 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 319 -----TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M +G P++ YN L+
Sbjct: 374 MLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLM 429
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG V + V ++ L+ G + G D +++ + + ++ D + Y +L+ G K
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQ--SLLPDLITYNTLIYGLCKK 295
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A + +E V + +K + +++D C G D A + RM E+ +
Sbjct: 296 GDLKQANDLIDEMVMKG--LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN-----I 348
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + G C +GR DA ++ R+M PDT ++ +I++ CK G + +
Sbjct: 349 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSR 408
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L EM G P TY +LM+
Sbjct: 409 LLKEMQRNGHVPSVVTYNVLMN 430
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 101/252 (40%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + F EA L + + AV +
Sbjct: 12 NSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSD 71
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 72 IYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYE 131
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP++ YN L+ +++G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M+ ++ D +Y ++ L K+D+ E+ +L G +
Sbjct: 192 DLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFT 251
Query: 303 EFVKGELSKEGR 314
+ G K+GR
Sbjct: 252 TLIDGH-CKKGR 262
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 114/245 (46%), Gaps = 9/245 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y ++ +DG D LF E+K + G+ D V Y S++ G G E A +
Sbjct: 239 VCYCTIIDSLCKDGLIDKGKELFLEMKGR--GISPDVVAYSSIIHGMCHTGRWEGAKGLF 296
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
NE V E V + V N ++DALC GK +EA L M P ++N +
Sbjct: 297 NEMVDE--GVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTF-----TYNTL 349
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DG+C +GR DA ++F M D +S+N LI+ CK+G + EA++LY EM K +
Sbjct: 350 IDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEI 409
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P TY L+ F +V D F +M L P YN L+ L + L EA
Sbjct: 410 MPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAME 469
Query: 251 FFDIM 255
F +
Sbjct: 470 LFHYL 474
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 142/296 (47%), Gaps = 20/296 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G + V ++ L+ G R ++ G+ R + G + V YG+L+ G
Sbjct: 153 MLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRM-----GYRPNVVTYGTLLNGL 207
Query: 58 FMKGMEEEAMECYNEAVGENS----SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE 113
M G A++ + E + N ++K + V +++D+LC +G D+ +LF MK
Sbjct: 208 CMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGR 267
Query: 114 HNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
P +A ++ + G C GR++ A +F +M + P+ ++FN LID LCK G
Sbjct: 268 GISPDVVA-----YSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAG 322
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
+ EA L M +G +PD +TY L+D C E R+DD F M G+ + Y
Sbjct: 323 KMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLE-GRIDDARDLFVSMESKGIETDAVSY 381
Query: 233 NRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
N L+ + G + EAK + ++M K++ +Y ++ L GK+ + + G
Sbjct: 382 NVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFG 437
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 157/343 (45%), Gaps = 35/343 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG----VVSDGVVYGSLMKG 56
M G+ + V Y L+ G G++ +L EE+ GG + + V Y +++
Sbjct: 188 MVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDS 247
Query: 57 YFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
G+ ++ E + E G + VA +S++ +C+ G+++ A LF+ M +E
Sbjct: 248 LCKDGLIDKGKELFLEMKGR--GISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P N+ +FNV+ D C G+ ++A + + M + SPDT ++N LID C G +
Sbjct: 306 P-----NVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRID 360
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A +L+ M KG+ D +Y +L++ + R+ + +R+M+ + P + YN L+
Sbjct: 361 DARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLL 420
Query: 237 GKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILE----------- 284
L + G + +A + F ++ V L + +Y ++ L L E +E
Sbjct: 421 TGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQ 480
Query: 285 --------IVGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
++ G+ IE + EL LS EG E V+
Sbjct: 481 PSIQIFNCLIDGLCKARKIEIARELFN----RLSHEGLEPNVI 519
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 10/287 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ L+ GF +G D LF ++ K G+ +D V Y L+ GY
Sbjct: 334 MIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESK--GIETDAVSYNVLINGYCKS 391
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + Y E + + + + + N++L L GK +A LF MK P+
Sbjct: 392 GRMVEAKKLYREMMCK--EIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESC 449
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N++ DG C +A+E+F + + P FN LID LCK + A E
Sbjct: 450 -----TYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARE 504
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ +S +G+ P+ TY +++ + ++++ F M + G PNL +N L+
Sbjct: 505 LFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFC 564
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
Q + + M +K D ++ ++ LS K E L ++
Sbjct: 565 QNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLL 611
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Query: 91 LDALCNNG--KFDEALKLFDRMKN-EHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
L + C +G K EA +F+ + + + PP + SFN + R+ D I ++
Sbjct: 62 LKSNCKSGHIKRSEAFSVFNHLIDMQPTPP------ISSFNTLLGAVAKIKRYFDVISLY 115
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
++M +PD ++ N LI+ C + + GEM +G +P+ T+ L+
Sbjct: 116 KRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLG 175
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+R+ + RKMV G RPN+ Y L+ L G
Sbjct: 176 SRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTG 211
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Query: 135 CGQGRFK--DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
C G K +A VF + + + +P SFN L+ + K + LY MS G+ P
Sbjct: 66 CKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAP 125
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
D T +L++ +N+VD G +M+ G PN + LV L + EA
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185
Query: 253 DIMVK 257
MV+
Sbjct: 186 RKMVR 190
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 157/346 (45%), Gaps = 41/346 (11%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D YS LM G + G R+ +E++EK G + V Y +L+ + GM
Sbjct: 342 KGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEK--GCAPNIVTYSTLLHSFCRNGMW 399
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A ++ + + S M++ N ++ ALC +GK D+A +L MK++ P N
Sbjct: 400 DDARAMLDQMLAKGFS--MNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYN 457
Query: 124 LG------------------------------SFNVMADGYCGQGRFKDAIEVFRKMGEY 153
++N + GR+++ + + +M +
Sbjct: 458 TMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLH 517
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
C D +S+N LI LCK G + + L EM KG+ P+ ++Y +L++ + +V D
Sbjct: 518 GCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDA 577
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKA 272
++M++ GL P++ YN L+ L +VG A + + + + + D +Y ++
Sbjct: 578 LELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISW 637
Query: 273 LSDGGKLDE---ILE--IVGGILDDGGIEFSEELQEFVKGELSKEG 313
LD+ +L+ I GGI+ + + +Q FV+ ++ EG
Sbjct: 638 HCKVRLLDDAAMLLDKAISGGIVPNER-TWGMMVQNFVRQTVNLEG 682
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 152/325 (46%), Gaps = 15/325 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G AD ++ L+LG G RL + + + G + V YG L++G
Sbjct: 238 MLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQ--GCMPSVVTYGFLLQGLCRT 295
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA +G V + V N+V+ GK A +L++ M ++ PP
Sbjct: 296 RQADEACA----MLGRLPEV--NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPP--- 346
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++++ G C GRF A+ + +M E C+P+ ++++ L+ C+NGM +A
Sbjct: 347 --DVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARA 404
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +M KG + + Y ++ A + ++D ++M G +P++ YN ++ L
Sbjct: 405 MLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLC 464
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+++EA+ F ++++ + + +Y ++ AL G+ E L + +L G
Sbjct: 465 NNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVI 524
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+K L KEG + + L+E+
Sbjct: 525 SYNGLIKA-LCKEGNVDRSMALLEE 548
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 5/165 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N VL L +AL L+ RM + PP +F V A C GR DA+ +
Sbjct: 146 NVVLSTLARADCHADALLLYRRMLRDRVPPTTF-----TFGVAARALCRLGRAGDALALL 200
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
R M + C PD + + +I L G +AEA L EM G D T+ L+ +
Sbjct: 201 RGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGL 260
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
RV + A +M+ G P++ Y L+ L + DEA +
Sbjct: 261 GRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAML 305
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 15/229 (6%)
Query: 102 EALKLFDRMKNEHNPPKRLAVN--LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
AL L D+M P+R AV+ S+NV+ DA+ ++R+M R P T
Sbjct: 124 RALHLLDQM------PRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTT 177
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
+F LC+ G +A L M+ G PD Y ++ A V + A +
Sbjct: 178 FTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDE 237
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGK 278
M+ G ++ +N LV L +G + EA D M+ + M +Y F+++ L +
Sbjct: 238 MLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQ 297
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELS--KEGREEEVVKLMEKK 325
DE ++G + + + L ++G L+ K R E+ ++M K
Sbjct: 298 ADEACAMLGRLPEVNVV----MLNTVIRGCLTEGKLARATELYEMMGSK 342
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 143/287 (49%), Gaps = 12/287 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G+ D V L+ GF R L +++ E G D V Y +++
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI--GYRPDIVAYNAIIDSLCKT 203
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKR 119
+A++ + E +G ++ + V ++++ LCN+G++++A +L D +K + P
Sbjct: 204 RRVNDALDFFKE-IGRKG-IRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITP--- 258
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ +++ + D + G+ +A E+F +M PD +++++LI+ LC + + EA
Sbjct: 259 ---NVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+++ M KG PD +Y L++ + RV+DG FRKM GL N YN L+
Sbjct: 316 QMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGF 375
Query: 240 VQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEI 285
QVG +D+A+ FF M + D +Y ++ L D G L++ L I
Sbjct: 376 FQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVI 422
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 139/280 (49%), Gaps = 10/280 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ L+ G G + RL ++ ++ + + + Y +L+ + G
Sbjct: 219 KGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKR--KITPNVITYSALLDAFVKNGKV 276
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E + E V S+ V +S+++ LC + + DEA ++FD M ++ P +
Sbjct: 277 LEAKEIFEEMV--RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFP-----D 329
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S+N + +G+C R +D +++FRKM + +T+++N LI + G + +A+E +
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFS 389
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M GV+PD +TY +L+ + ++ F M S + ++ Y ++ + + G
Sbjct: 390 QMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTG 449
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
+++A F + +K LK D +Y MM L G E+
Sbjct: 450 KVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEV 489
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 138/278 (49%), Gaps = 10/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D V Y+ ++ + + F+E+ K G+ + V Y +L+ G G
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRK--GIRPNVVTYTALVNGLCNSGRWN 242
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + + + + + +++LDA NGK EA ++F+ M P ++
Sbjct: 243 DAARLLRDMIKRK--ITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDP-----DI 295
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + +G C R +A ++F M C PD +S+N LI+ CK + + +L+ +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRK 355
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS +G+ + TY L+ F+V VD +F +M G+ P++ YN L+G L G+
Sbjct: 356 MSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGL 415
Query: 245 LDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDE 281
L++A F+ M K ++ +D +Y +++ + GK+++
Sbjct: 416 LEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVED 453
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 6/204 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S V N +L A+ K+D + L +M+ + +L +FN++ + +C +
Sbjct: 84 SIVDFNRLLSAIVKMKKYDVVISLGKKMEVLG-----IRNDLYTFNIVINCFCCCFQVSL 138
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ V KM + PD ++ +L++ C+ +++A L +M + G PD Y ++D
Sbjct: 139 ALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIID 198
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML-DEAKSFFDIMVKKLKM 261
+ + RV+D +F+++ G+RPN+ Y LV L G D A+ D++ +K+
Sbjct: 199 SLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITP 258
Query: 262 DDASYKFMMKALSDGGKLDEILEI 285
+ +Y ++ A GK+ E EI
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKEI 282
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 42/225 (18%)
Query: 139 RFKDAIEVFRKMGEYRCSP-----------------------------------DTLSFN 163
+ DAI +FR+M + R P D +FN
Sbjct: 65 KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
+I+ C ++ A + G+M G PD T G L++ NRV D + KMV+
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE- 281
G RP++ YN ++ L + +++A FF +I K ++ + +Y ++ L + G+ ++
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244
Query: 282 ---ILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE--EEVVKL 321
+ +++ + I +S L FVK E +E EE+V++
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRM 289
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 138/280 (49%), Gaps = 14/280 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ GF G + E++E+ GG+ D Y +L+ G+ G E+A++ +
Sbjct: 148 VTYNTVIAGFCARGRVQAALEVMREMRER-GGIAPDKYTYATLISGWCKIGRMEDAVKVF 206
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+E + + V SAV N+++ C+ GK D AL+ + M + +A+ + ++N++
Sbjct: 207 DEMLTKG-EVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQ-----RGIAMTVATYNLL 260
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
R DA V +M + SPD ++N LI+ CK G +A E++ EMS KGV
Sbjct: 261 MHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGV 320
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
TY L+ +V + F V G+RP++ +YN L+ G ++ A
Sbjct: 321 RATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERA-- 378
Query: 251 FFDIMV----KKLKMDDASYKFMMKALSDGGKLDEILEIV 286
++IM K++ DD +Y +M+ G+LDE ++
Sbjct: 379 -YEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLI 417
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 128/275 (46%), Gaps = 10/275 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G Y+ LM D + + + EE+++ G D Y L+ GY +
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQK--NGFSPDVFTYNILINGYCKE 302
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E++A+E + E V+ +AV S++ G+ E +LF+ + P
Sbjct: 303 GNEKKALEVFEEM--SQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRP--- 357
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +N + + +C G + A E+ +M + R PD +++N L+ C G L EA
Sbjct: 358 --DVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEART 415
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM+ +G+ PD +Y L+ + D +M+D G P L YN L+ L
Sbjct: 416 LIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLC 475
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
++ D+A++ MV K + DD++Y +++ L+
Sbjct: 476 KIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLT 510
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 115/222 (51%), Gaps = 14/222 (6%)
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
RL + +FN+M C G+ A+E+ R+M P+ +++N +I C G + A
Sbjct: 111 RLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAA 166
Query: 179 EELYGEMSDK-GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG-LRPNLAVYNRLV 236
E+ EM ++ G+ PD+YTY L+ ++ R++D F +M+ G + P+ +YN L+
Sbjct: 167 LEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALI 226
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
G VG LD A + + MV++ + M A+Y +M AL + + ++ + +G
Sbjct: 227 GGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNG-- 284
Query: 296 EFSEELQEF---VKGELSKEGREEEVVKLMEKKEREKAEAKA 334
FS ++ + + G KEG E++ +++ E+ ++ A A
Sbjct: 285 -FSPDVFTYNILING-YCKEGNEKKALEVFEEMSQKGVRATA 324
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 111/247 (44%), Gaps = 12/247 (4%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
+ V Y +++ G+ +G + A+E E + E + +++ C G+ ++A+
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMRE-MRERGGIAPDKYTYATLISGWCKIGRMEDAV 203
Query: 105 KLFDRM--KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
K+FD M K E P + +N + GYC G+ A++ M + + ++
Sbjct: 204 KVFDEMLTKGEVAPSAVM------YNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATY 257
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMV 221
N L+ L + ++A + EM G +PD +TY +L++ C E N F +M
Sbjct: 258 NLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNE-KKALEVFEEMS 316
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
G+R Y L+ + G + E F++ VKK ++ D Y ++ + GG ++
Sbjct: 317 QKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDME 376
Query: 281 EILEIVG 287
EI+
Sbjct: 377 RAYEIMA 383
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 17/288 (5%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D ++++L+ G +DG+ D +LFE ++ V D Y +++ G G E+A E
Sbjct: 96 DVYIFNFLIHGLFKDGNPDQAVKLFENMESS--RVNPDIFTYNTVISGLCKSGNLEKARE 153
Query: 69 CYNEAVGENSSVKMSAVANNSVLDA-LCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E + V N++++A +C +G +EAL++ D MK P ++ ++
Sbjct: 154 LLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAP-----DVITY 208
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + C GR +A E+ + M CSPD ++FN L+D CK GML A E+ EM
Sbjct: 209 NSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 265
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+ + PD TY +L++ V +V ++V G P++ Y LV L + G ++E
Sbjct: 266 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 325
Query: 248 AKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
A M + + + M+ L ++GG++ DG I
Sbjct: 326 AHKLVKEMSAREILAEMVSINMVPPLFTYNI------VLGGLIKDGSI 367
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 14/272 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + D + Y+ L+ G R G F L EE+ + G + D + Y SL+ G
Sbjct: 263 MCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQ--GYIPDVIAYTSLVDGLCKS 320
Query: 61 GMEEEAMECY-----NEAVGENSSVKM--SAVANNSVLDALCNNGKFDEALKLFDRMKNE 113
G EEA + E + E S+ M N VL L +G +A+ L +
Sbjct: 321 GEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR 380
Query: 114 HNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
P ++ ++N + DG C R ++A ++ +M C P+ ++ +++ LC+ G
Sbjct: 381 GYVP-----DVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVG 435
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
+ +A L EMS K P+ Y L+D + +R+DD M G+ + Y
Sbjct: 436 RVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYR 495
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS 265
+L+ ++ G + EA + +D MV + + D S
Sbjct: 496 KLIVSMIHGGRVAEAMAMYDEMVARGFLPDGS 527
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 9/216 (4%)
Query: 75 GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGY 134
GE K + N +LD L +G K++ + + P NL +F ++ G
Sbjct: 18 GEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSP-----NLVTFKILIRGN 72
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G+ A+E R + E+ +PD FN LI L K+G +A +L+ M VNPD
Sbjct: 73 CKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDI 132
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLR--PNLAVYNRLVGK-LVQVGMLDEAKSF 251
+TY ++ + ++ +M+ G + P++ YN L+ + + G ++EA
Sbjct: 133 FTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEI 192
Query: 252 FDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
D M + D +Y ++ AL G++ E EI+
Sbjct: 193 LDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEIL 228
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 97 NGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
+ + D A++ FD E + K ++ S+N + D G +V++ + CS
Sbjct: 4 SSRPDLAIQFFD-WAGEQDGYKH---DVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCS 59
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P+ ++F LI CK G A E + + V PD Y + L+ F+ D
Sbjct: 60 PNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKL 119
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK---KLKMDDASYKFMMKA- 272
F M S + P++ YN ++ L + G L++A+ + M++ K D +Y ++ A
Sbjct: 120 FENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAG 179
Query: 273 LSDGGKLDEILEIVGGI 289
+ G ++E LEI+ G+
Sbjct: 180 ICKDGDVEEALEILDGM 196
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 147/283 (51%), Gaps = 13/283 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G+ D V+Y+ L+ GF + G + +L+ E+ +K G + + Y +L+ G+ G
Sbjct: 362 RGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDK--GFLPNEYSYNTLIYGFCKIGNL 419
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAM+ Y + + +S K + ++ N+++ LC +G+ DEA F M P K + +
Sbjct: 420 DEAMKLYKKML--DSGYKETTLSCNTLILGLCLHGRTDEAYDFFREM-----PCKNIVCD 472
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + G+C +G+ + ++ +++ P T S+ +LI +LC+ G + EA+E++
Sbjct: 473 VITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWN 532
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M ++G+ P T ++ E V +G + M+ S L+P + +L+ L+Q+G
Sbjct: 533 DMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIG 592
Query: 244 --MLDEAK--SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
+L E K S V L M +S F+ L D L +I
Sbjct: 593 KELLLELKMDSKTSKEVYPLAMTKSSSNFLPLFLIDHCSLLKI 635
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 122/262 (46%), Gaps = 12/262 (4%)
Query: 21 VRDGDSDGVFRLFEELKEKLGGVVSDGVV--YGSLMKGYFMKGMEEEAMECYNEAVGENS 78
++ G +D +++L+E + E GV D + G L++ + A E +++ +
Sbjct: 237 LKFGRTDLIWKLYEGMMET--GVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGL 294
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQG 138
+ A N ++ C L+L M ++ P ++ ++ + +G+C
Sbjct: 295 TPCNDAF--NKLISGFCKEKNHHRVLELVHTMIVKNRNP-----DIFTYQEIINGFCKNW 347
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
A EVF + + +PD + + LI CK G L +A +L+ EM DKG P+EY+Y
Sbjct: 348 MTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYN 407
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVK 257
L+ ++ +D+ ++KM+DSG + N L+ L G DEA FF ++ K
Sbjct: 408 TLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCK 467
Query: 258 KLKMDDASYKFMMKALSDGGKL 279
+ D +Y +++ GK+
Sbjct: 468 NIVCDVITYNTLIQGFCREGKV 489
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 9/243 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ L+ GF ++ + V L + K D Y ++ G+ M +A E +N
Sbjct: 301 FNKLISGFCKEKNHHRVLELVHTMIVKNRN--PDIFTYQEIINGFCKNWMTLQAFEVFNA 358
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ M V +++ C G+ ++A KL+ M ++ P N S+N +
Sbjct: 359 LKDRGYAPDM--VMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLP-----NEYSYNTLIY 411
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G+C G +A+++++KM + TLS N LI LC +G EA + + EM K +
Sbjct: 412 GFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVC 471
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
D TY L+ +V +++ GL+P+ + Y L+ KL Q+G + EAK +
Sbjct: 472 DVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMW 531
Query: 253 DIM 255
+ M
Sbjct: 532 NDM 534
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
V++ + + +C + A E+ R+ E +P +FN LI CK EL
Sbjct: 261 VDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLEL 320
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M K NPD +TY +++ + F + D G P++ +Y L+ +
Sbjct: 321 VHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCK 380
Query: 242 VGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+G L++A K +F+++ K ++ SY ++ G LDE +++ +LD G E +
Sbjct: 381 MGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLS 440
Query: 301 LQEFVKGELSKEGREEE 317
+ G L GR +E
Sbjct: 441 CNTLILG-LCLHGRTDE 456
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
SP+ S N I +C+ G++ EA + + + G P T+ +C + R D
Sbjct: 188 SPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWK 247
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ M+++G++ ++ + VG L+Q
Sbjct: 248 LYEGMMETGVQKDVDI--ETVGYLIQ 271
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 139/274 (50%), Gaps = 14/274 (5%)
Query: 9 DPVVYSY-LML-GFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGMEEE 65
+P V+SY +ML G+ G + LF+ + LG G+ D + L+K Y GM ++
Sbjct: 360 NPDVFSYKIMLNGYATKGCLVDMTDLFDLM---LGDGIAPDIYTFSVLIKAYANCGMLDK 416
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
AM +NE + VK V +V+ ALC GK D+A++ F++M ++ P + A
Sbjct: 417 AMIIFNEM--RDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA---- 470
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ + G+C G A E+ ++ D + F+++I+ LCK G + +A+ ++
Sbjct: 471 -YHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLT 529
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ G +PD Y +LMD V +++ F MV +G+ PN+ VY LV ++G +
Sbjct: 530 VNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRI 589
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
DE S F M++K +K Y ++ L G+
Sbjct: 590 DEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGR 623
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 143/295 (48%), Gaps = 18/295 (6%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGVVS--DGVVYGSLMKGYFM 59
G V D YS L+ + G +D + R+ E GG V D V Y +++ +F
Sbjct: 181 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAE-----GGAVCSPDVVAYTTVIDCFFK 235
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+G +A + + E V + V +SV+ ALC +A +M N+ P
Sbjct: 236 EGDVNKACDLFKEMV--QRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDN 293
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++N + GY G++K+A+ VF++M + PD ++ N L+ LCK G + EA
Sbjct: 294 W-----TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEAR 348
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+++ M+ KG NPD ++Y ++++ + D F M+ G+ P++ ++ L+
Sbjct: 349 DVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAY 408
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
GMLD+A F+ M +K D +Y ++ AL GK+D+ +E ++D G
Sbjct: 409 ANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQG 463
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 131/291 (45%), Gaps = 10/291 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G D V Y+ ++ R G D F ++ ++ GV D Y L++G+ G
Sbjct: 427 HGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQ--GVAPDKYAYHCLIQGFCTHGSL 484
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A E E + N+ +++ V +S+++ LC G+ +A +FD N P +
Sbjct: 485 LKAKELILEIM--NNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVV-- 540
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++++ DGYC G+ + A+ VF M P+ + + L++ CK G + E L+
Sbjct: 541 ---YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFR 597
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KG+ P Y +++D F R F +M +SG+ N YN ++ +
Sbjct: 598 EMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNR 657
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
DEA F ++ +K+D + M+ + +++E ++ I G
Sbjct: 658 CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSG 708
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L V++ N + G+C R +A+++ + E C PD S++ L+ LC G +A
Sbjct: 146 LRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 205
Query: 179 EELYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++L M++ G +PD Y ++D F+ V+ F++MV G+ P+L Y+ +V
Sbjct: 206 DDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVV 265
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
L + + +A++F MV K + D+ +Y ++ S G+ E + +
Sbjct: 266 HALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV 315
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 15/226 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
G D V +S ++ + G D+ +F L + + D VVY LM GY + G
Sbjct: 498 GMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQH-----PDAVVYSMLMDGYCLVG 552
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E+A+ ++ V ++ ++ + V ++++ C G+ DE L LF M + P +
Sbjct: 553 KMEKALRVFDAMV--SAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 610
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+N++ DG GR A F +M E + + ++N ++ KN EA L
Sbjct: 611 -----YNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFL 665
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
+ E+ V D T ++ F+ RV++ F + SGL P
Sbjct: 666 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
++P +TY +LMD C +R + +F +++ +GLR ++ + N L+ + DEA
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA- 169
Query: 250 SFFDIMVKKLK-----MDDASYKFMMKALSDGGK---LDEILEIV---GGILDDGGIEFS 298
DI++ + D SY ++K+L D GK D++L ++ G + + ++
Sbjct: 170 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYT 227
Query: 299 EELQEFVK-------GELSKEGREEEVVK-LMEKKEREKAEAKAREAEAAEAAKR 345
+ F K +L KE + + L+ A KAR AEA R
Sbjct: 228 TVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLR 282
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G+ +
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSAVSYNTLMNGYIRLGVLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ L K D+A +LFD M K L N
Sbjct: 195 EGFRLKSAMLA--SGVQPDVYTYSVLINGLSKESKMDDADELFDEML-----VKGLVPNG 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCK G L +A +L +
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDD 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +D + ++M+ +R + VY L+ L Q G
Sbjct: 308 MSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGR 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ L D +Y ++ G
Sbjct: 368 SVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKG 401
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V +GV + +L+ G+
Sbjct: 203 MLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVK--GLVPNGVTFTTLIDGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G +A L D M + P ++
Sbjct: 261 GRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKI 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D + + LI LC+ G +AE+
Sbjct: 319 -----TYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+NPD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 374 MLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 99/202 (49%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG V + V ++ L+ G ++G D +++++ + ++ D + Y +L+ G K
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKK 295
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A + ++ +K + +++D C G D A + RM E+ +
Sbjct: 296 GDLKQAHDLIDDM--SRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN-----I 348
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + + G C +GR DA ++ R+M +PDT ++ +I++ CK G + + +
Sbjct: 349 RLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSK 408
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L EM G P TY +LM+
Sbjct: 409 LLKEMQRDGHVPSVVTYNVLMN 430
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 101/252 (40%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + F EA L + + AV +
Sbjct: 12 NSTFRHTLHSYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAILETKGTQRSD 71
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 72 IYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYE 131
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP+ YN L+ +++G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLG 191
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+LDE M+ ++ D +Y ++ LS K+D+ E+ +L G +
Sbjct: 192 VLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFT 251
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 252 TLIDGH-CKNGR 262
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 14/276 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 133 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 190
Query: 65 EAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
E + A G V +V +++ LC K D A +LFD M K L
Sbjct: 191 EGFRLKSAMLASGXXPDVYTYSV----LINGLCKESKMDGANELFDEML-----VKGLVP 241
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +F + DG+C GR A+E++++M PD +++N LI LCK G L +A +L
Sbjct: 242 NXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 301
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EMS KG+ PD++TY L+D C + +D + ++M+ +R + Y L+ L Q
Sbjct: 302 DEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQE 361
Query: 243 GM-LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
G +D K +++ L D +Y ++ G
Sbjct: 362 GRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKG 397
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 9/220 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ DG LF+E+ K G+V + V + +L+ G+
Sbjct: 199 MLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVK--GLVPNXVTFTTLIDGHCKN 256
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G +A L D M + P +
Sbjct: 257 GRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKF 314
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A ++M + D +++ LI LC+ G +AE+
Sbjct: 315 -----TYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 369
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+ EM G+ PD TY ++++ + V G+ ++M
Sbjct: 370 MLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 97/252 (38%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + + AV +
Sbjct: 8 NSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSD 67
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 68 IYVFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYE 127
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP++ YN L+ +++G
Sbjct: 128 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 187
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M+ D +Y ++ L K+D E+ +L G +
Sbjct: 188 DLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFT 247
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 248 TLIDGH-CKNGR 258
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 128/274 (46%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRJAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ C K D+A +LFD M K L N
Sbjct: 195 EGFRLKSAMLA--SGVQPDVYTYSVLINGXCKESKXDDANELFDEML-----VKGLVPNX 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
F + DG+C GR A+E++++M SPD +++N LI LCK G L +A L E
Sbjct: 248 VXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +D + ++M+ R + Y L+ L G
Sbjct: 308 MSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGR 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 368 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V + V + +L+ G+
Sbjct: 203 MLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVK--GLVPNXVXFTTLIDGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 261 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKI 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D + + LI LC G +AE+
Sbjct: 319 -----TYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 374 MLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG V + V ++ L+ G ++G D +++++ + + D + Y +L+ G K
Sbjct: 238 MLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQ--SLSPDLITYNTLIYGLCKK 295
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A +E +K + +++D C G D A + RM E+
Sbjct: 296 GDLKQAHHLIDEM--SXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENX----- 348
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + + G C +GR DA ++ R+M PD ++ +I++ CK G + + +
Sbjct: 349 RLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSK 408
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L EM G P TY +LM+
Sbjct: 409 LLKEMQRDGHVPSVVTYNVLMN 430
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 97/252 (38%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 12 NSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSD 71
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
J F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 72 JYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYE 131
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP++ YN L+ +++G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M+ ++ D +Y ++ K D+ E+ +L G +
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFT 251
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 252 TLIDGH-CKNGR 262
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++G+ +F+ + + G+ V + +LM GY G
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITK--WGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A +LFD M + P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVP-----NS 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
SF + DG+C GR A+E++++M SPD +++N LI LCKNG L +A++L E
Sbjct: 242 VSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V + V + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLD--NGLVPNSVSFTTLIDGHCKD 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC NG +A L + M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +LM + + + + F + GLRP++ +N L+ +++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L+E + M ++ D +Y ++ L KLD+ E+ +LD+G + S
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFT 245
Query: 303 EFVKGELSKEGR 314
+ G K+GR
Sbjct: 246 TLIDGH-CKDGR 256
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 31/228 (13%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL-------------------- 124
+ N++LD LC G+ +EA L MKN+ P R N+
Sbjct: 233 ITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIEL 292
Query: 125 ----------GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
++NVM G+C QGR +A+ + +M + SPD +++N LI+ ++G
Sbjct: 293 MSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGS 352
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
E +L EM +G+ P+ TY +++ + ++D+ RKM +SG P++ YN
Sbjct: 353 SEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNT 412
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
L+ +VG +DEA D M +K LKMDD + M++AL KLDE
Sbjct: 413 LISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDE 460
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 174/366 (47%), Gaps = 39/366 (10%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y+ ++ FV+ G D V + +++E G + D V Y +L+ + G
Sbjct: 366 RGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEE--SGCLPDIVTYNTLISWHCKVGKM 423
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA +E +G +KM V N++L ALC K DEA L + + V+
Sbjct: 424 DEAFRLMDE-MGR-KGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARR-----RGYFVD 476
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+ + GY + A+ ++ +M E P +++N++I LC+ G +A +
Sbjct: 477 EVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLD 536
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G+ PDE TY ++ + +V+ + KMV+ +P++ N L+ L + G
Sbjct: 537 ELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEG 596
Query: 244 MLDEAKSFFDIMVKKLK-MDDASYKFMMKALSDGGKLDE---ILE--------------- 284
ML++A F+ + K K +D SY ++ +L + E +LE
Sbjct: 597 MLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYN 656
Query: 285 -IVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAA 343
I+GG+ D G ++ +E EF+ +++++G+ E + +E +R+ AR +E +
Sbjct: 657 AILGGLTDAGRMKDAE---EFI-SKIAEKGKSEN--QFLELGKRQ----DARTSEIPQEP 706
Query: 344 KRSARA 349
+A A
Sbjct: 707 HPNAIA 712
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 10/210 (4%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+N SFN++ G C + RF +AI V KM +Y C PD +++N ++D LCK G L EA +L
Sbjct: 195 INTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDL 254
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+M +KG+ P+ T+ +L+ C + + + A M + + P+ YN ++ +
Sbjct: 255 LLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCK 314
Query: 242 VGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDE----ILEIVGGILDDGGIE 296
G + EA + M KL D +Y ++ + G +E I E+ G + +
Sbjct: 315 QGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVT 374
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEKKE 326
++ ++ FV K+G+ +EV K + K E
Sbjct: 375 YNVMVKWFV-----KKGKMDEVDKTVRKME 399
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 141/317 (44%), Gaps = 13/317 (4%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKE-KLGGVVSDGVVYGSLMKGYFMKGMEEE 65
V D Y+ ++ GF + G RL EE++ KL D V Y +L+ G F G EE
Sbjct: 299 VPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLS---PDVVTYNTLINGCFEHGSSEE 355
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
+ E E +K ++V N ++ GK DE K +M+ P ++
Sbjct: 356 GFKLIEEM--EGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLP-----DIV 408
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + +C G+ +A + +MG D ++ N ++ LC+ L EA +L
Sbjct: 409 TYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSA 468
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+G DE +YG L+ F+ + + +M + + P++ YN ++ L Q+G
Sbjct: 469 RRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKT 528
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
++A D +++ L D+ +Y ++ G++++ + +++
Sbjct: 529 NQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTL 588
Query: 305 VKGELSKEGREEEVVKL 321
+ G L KEG E+ +KL
Sbjct: 589 LCG-LCKEGMLEKALKL 604
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 99/229 (43%), Gaps = 7/229 (3%)
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
L + +NP L ++ ++ Y GR A ++F +M P L+ N L
Sbjct: 106 LLLHPQKTNNPVSCLHISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTL 165
Query: 166 IDQLCK---NGMLAEAEELYGEMSDKGVNPDEYTYGLLMD-ACFEVNRVDDGATYFRKMV 221
++ L + + + ++ ++ + GV + ++ +L+ +C E NR + KM
Sbjct: 166 LNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCME-NRFGEAIRVLGKMR 224
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKALSDGGKLD 280
D G P+ YN ++ L + G L+EA+ D+ K L + ++ ++ G L
Sbjct: 225 DYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLK 284
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREK 329
E ++ + + + + + G K+GR E ++L E+ E K
Sbjct: 285 EAANVIELMSQNSVVPDAWTYNVMISG-FCKQGRIAEAMRLREEMENLK 332
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 150/313 (47%), Gaps = 37/313 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-VYGSLMKGYFM 59
M KG D V Y ++ G + GD+D F L ++++ G + GV +Y +++ G
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ---GKLEPGVLIYNTIIDGLCK 268
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNP-- 116
++A+ + E E ++ + V +S++ LCN G++ +A +L D ++ + NP
Sbjct: 269 YKHMDDALNLFKEM--ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 117 ---------------------------PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+ + ++ +++ + +G+C R +A ++F
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M C PD +++N LI CK + E E++ EMS +G+ + TY +L+ F+
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKF 268
D F++MV G+ PN+ YN L+ L + G L++A F+ + + K++ +Y
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 269 MMKALSDGGKLDE 281
M++ + GK+++
Sbjct: 507 MIEGMCKAGKVED 519
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 131/282 (46%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ + V S L+ G+ L +++ + G + V + +L+ G F+
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF--VTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EAM + V + + V V++ LC G D A L ++M+ P L
Sbjct: 204 EAMALIDRMVAKGCQPDL--VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI--- 258
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+N + DG C DA+ +F++M P+ +++++LI LC G ++A L +
Sbjct: 259 --YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++ +NPD +T+ L+DA + ++ + + +MV + P++ Y+ L+
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 245 LDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI 285
LDEAK F+ MV K D +Y ++K +++E +E+
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 11/230 (4%)
Query: 9 DP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP V YS L+ GF D ++FE + K D V Y +L+KG+ EE
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK--HCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
ME + E + + V N ++ L G D A ++F M ++ PP N+ +
Sbjct: 416 MEVFREM--SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP-----NIMT 468
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + DG C G+ + A+ VF + + P ++N +I+ +CK G + + +L+ +S
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
KGV PD Y ++ ++ F++M + G PN YN L+
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 57/257 (22%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V + V Y+ L+ G + GD D +F+E+ VSDG
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM-------VSDG---------------- 461
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
V + + N++LD LC NGK ++A+ +F+ ++ P
Sbjct: 462 ----------------VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP-----T 500
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N+M +G C G+ +D ++F + PD +++N +I C+ G EA+ L+
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDG-----ATYFRKMVDSGLRPNLAVYNRLVGK 238
EM + G P+ Y L+ A R+ DG A ++M G + + LV
Sbjct: 561 EMKEDGTLPNSGCYNTLIRA-----RLRDGDREASAELIKEMRSCGFAGDASTIG-LVTN 614
Query: 239 LVQVGMLDEAKSFFDIM 255
++ G LD KSF D++
Sbjct: 615 MLHDGRLD--KSFLDML 629
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S + + +L A+ KFD + L ++M+N P N +++++ + +C + +
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPH-----NHYTYSILINCFCRRSQLPL 134
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ V KM + P+ ++ ++L++ C + ++EA L +M G P+ T+ L+
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKM 261
F N+ + +MV G +P+L Y +V L + G D A + + M + KL+
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP 254
Query: 262 DDASYKFMMKALSDGGKLDEILEI 285
Y ++ L +D+ L +
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDALNL 278
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 6/197 (3%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ DA+ +F +M + R P + F+ L+ + K L +M + G+ + YTY
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VK 257
+L++ +++ KM+ G PN+ + L+ + EA + D M V
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 258 KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKGELSKEGRE 315
+ + ++ ++ L K E + ++ ++ G +L + V L K G
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC---QPDLVTYGVVVNGLCKRGDT 237
Query: 316 EEVVKLMEKKEREKAEA 332
+ L+ K E+ K E
Sbjct: 238 DLAFNLLNKMEQGKLEP 254
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 153/323 (47%), Gaps = 30/323 (9%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V D ++ LM GF+ +G+ DG FR+ E++ + G V L+ G+ +G E
Sbjct: 223 GLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLD--AGCPVTNVTVNVLVHGFCKEGRIE 280
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ S +D + N GK A++L++ MKN+ P
Sbjct: 281 EAL---------------------SFIDEMSNEGKHTMAIELYNEMKNKGCQPDEF---- 315
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ D C +G+ ++A+ + R+M C+ + +++N LID CKN + EAEE++ +
Sbjct: 316 -TYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQ 374
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +G++ + TY L+D + RV + A +M+ GL+P+ YN ++ + G
Sbjct: 375 MEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGD 434
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+ +A M + D +Y ++ L G+++ ++ I G +
Sbjct: 435 IQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNP 494
Query: 304 FVKGELSKEGREEEVVKLMEKKE 326
++ L K R +E ++L + E
Sbjct: 495 VIQA-LFKRKRTKEAMRLFREME 516
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 109/289 (37%), Gaps = 35/289 (12%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
NV+ DG + K V M PD +FN LI LCK + A + EMS
Sbjct: 165 LNVLVDG----NKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMS 220
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G+ PDE T+ LM E +D +M+D+G N LV + G ++
Sbjct: 221 SYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIE 280
Query: 247 EAKSFFDIMV-----------------KKLKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
EA SF D M K + D+ +Y ++ +L GKL E L ++ +
Sbjct: 281 EALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREM 340
Query: 290 LDDGG----IEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAK--------AREA 337
G I ++ + F K + +E EE+ ME + + +
Sbjct: 341 EISGCARNVITYNTLIDGFCKNKKIEEA--EEIFDQMEIQGLSRNSVTYNTLIDGLCKSR 398
Query: 338 EAAEAAKRSARAAIASLIPSKFGDKVGGTEMADNANANEAASVAEAQAG 386
EAA+ + + L P KF T + +AA + +
Sbjct: 399 RVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTS 447
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMG-EYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ G + D Y +++ + + M E+ + DTL +N L++ L L E
Sbjct: 120 IDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVEN 179
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M KG+ PD T+ +L+ A + +++ +M GL P+ + L+ +
Sbjct: 180 VHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFI 239
Query: 241 QVGMLDEA 248
+ G +D A
Sbjct: 240 EEGNMDGA 247
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 147/283 (51%), Gaps = 13/283 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G+ D V+Y+ L+ GF + G + +L+ E+ +K G + + Y +L+ G+ G
Sbjct: 326 RGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDK--GFLPNEYSYNTLIYGFCKIGNL 383
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAM+ Y + + +S K + ++ N+++ LC +G+ DEA F M P K + +
Sbjct: 384 DEAMKLYKKML--DSGYKETTLSCNTLILGLCLHGRTDEAYDFFREM-----PCKNIVCD 436
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + G+C +G+ + ++ +++ P T S+ +LI +LC+ G + EA+E++
Sbjct: 437 VITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWN 496
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M ++G+ P T ++ E V +G + M+ S L+P + +L+ L+Q+G
Sbjct: 497 DMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIG 556
Query: 244 --MLDEAK--SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
+L E K S V L M +S F+ L D L +I
Sbjct: 557 KELLLELKMDSKTSKEVYPLAMTKSSSNFLPLFLIDHCSLLKI 599
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 122/262 (46%), Gaps = 12/262 (4%)
Query: 21 VRDGDSDGVFRLFEELKEKLGGVVSDGVV--YGSLMKGYFMKGMEEEAMECYNEAVGENS 78
++ G +D +++L+E + E GV D + G L++ + A E +++ +
Sbjct: 201 LKFGRTDLIWKLYEGMMET--GVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGL 258
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQG 138
+ A N ++ C L+L M ++ P ++ ++ + +G+C
Sbjct: 259 TPCNDAF--NKLISGFCKEKNHHRVLELVHTMIVKNRNP-----DIFTYQEIINGFCKNW 311
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
A EVF + + +PD + + LI CK G L +A +L+ EM DKG P+EY+Y
Sbjct: 312 MTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYN 371
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVK 257
L+ ++ +D+ ++KM+DSG + N L+ L G DEA FF ++ K
Sbjct: 372 TLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCK 431
Query: 258 KLKMDDASYKFMMKALSDGGKL 279
+ D +Y +++ GK+
Sbjct: 432 NIVCDVITYNTLIQGFCREGKV 453
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 9/243 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ L+ GF ++ + V L + K D Y ++ G+ M +A E +N
Sbjct: 265 FNKLISGFCKEKNHHRVLELVHTMIVK--NRNPDIFTYQEIINGFCKNWMTLQAFEVFNA 322
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ M V +++ C G+ ++A KL+ M ++ P N S+N +
Sbjct: 323 LKDRGYAPDM--VMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLP-----NEYSYNTLIY 375
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G+C G +A+++++KM + TLS N LI LC +G EA + + EM K +
Sbjct: 376 GFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVC 435
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
D TY L+ +V +++ GL+P+ + Y L+ KL Q+G + EAK +
Sbjct: 436 DVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMW 495
Query: 253 DIM 255
+ M
Sbjct: 496 NDM 498
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
V++ + + +C + A E+ R+ E +P +FN LI CK EL
Sbjct: 225 VDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLEL 284
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M K NPD +TY +++ + F + D G P++ +Y L+ +
Sbjct: 285 VHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCK 344
Query: 242 VGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+G L++A K +F+++ K ++ SY ++ G LDE +++ +LD G E +
Sbjct: 345 MGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLS 404
Query: 301 LQEFVKGELSKEGREEE 317
+ G L GR +E
Sbjct: 405 CNTLILG-LCLHGRTDE 420
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
SP+ S N I +C+ G++ EA + + + G P T+ +C + R D
Sbjct: 152 SPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWK 211
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ M+++G++ ++ + VG L+Q
Sbjct: 212 LYEGMMETGVQKDVDI--ETVGYLIQ 235
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G+ +
Sbjct: 112 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSAVSYNTLMNGYIRLGVLD 169
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 170 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDDADELFDEM-----LVKGLVPNG 222
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCK G L +A +L +
Sbjct: 223 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDD 282
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + + + ++++ +R + VY L+ L Q G
Sbjct: 283 MSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGR 342
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ L D +Y ++ G
Sbjct: 343 SVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKG 376
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V +GV + +L+ G+
Sbjct: 178 MLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVK--GLVPNGVTFTTLIDGHCKN 235
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G +A L D M + P ++
Sbjct: 236 GRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKI 293
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E +++ + D + + LI LC+ G +AE+
Sbjct: 294 -----TYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEK 348
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+NPD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 349 MLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 404
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 77/189 (40%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE + +++ + +++ L K Y E+
Sbjct: 50 FSGLITAYLESGFLRDAIECYXLTRKHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEIL 109
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP+ YN L+ +++G+LD
Sbjct: 110 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLD 169
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E M+ ++ D +Y ++ L K+D+ E+ +L G + +
Sbjct: 170 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLI 229
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 230 DGH-CKNGR 237
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 145/312 (46%), Gaps = 23/312 (7%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
G D F +F E+ ++ G D YG+L+ G G EA E + E + S
Sbjct: 170 GTIDAAFEIFREMPKR--GCDPDSYTYGTLINGLCKLGKTFEAKELFKEM--DTKGCSPS 225
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V + ++ LC G DEA+ LFD+MK + P N+ +++ + DG C G +A
Sbjct: 226 VVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEP-----NVFTYSSLMDGLCKNGGSLEA 280
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+E+ M R P+ ++++ LI+ LCK G LAEA E M +G+ PD YG +++
Sbjct: 281 MELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIING 340
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVY-------NRLVGKLVQVGMLDEA-KSFFDIM 255
+ + + ATY +MV + PN + N +V L G L+ + + + +
Sbjct: 341 FCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMR 400
Query: 256 VKKLKMDDASYKFMMKALSDGGKLDEILEI-----VGGILDDGGIEFSEELQEFVKGELS 310
+ + +D ++ ++K G L + I + G + D GI +S + F
Sbjct: 401 TRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGI-WSAVVGGFWDRRKV 459
Query: 311 KEGREEEVVKLM 322
+E E VV+LM
Sbjct: 460 REAFESIVVELM 471
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 11/287 (3%)
Query: 2 FVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
+ GF D + ++ V + + +KE+ + + ++ S+ +GY
Sbjct: 42 YSNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEE--IFLSICRGYGRVH 99
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
M +A+ +++ + K + + SV L + A+ + M+ +
Sbjct: 100 MPLDAIRVFHKM--NDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMRE-----MGVR 152
Query: 122 VNLGSFNVMADGYC-GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S NV+ C G A E+FR+M + C PD+ ++ LI+ LCK G EA+E
Sbjct: 153 QSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKE 212
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM KG +P TY LM + VD+ F KM + PN+ Y+ L+ L
Sbjct: 213 LFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLC 272
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+ G EA ++MV K+ K + +Y ++ L GKL E +E +
Sbjct: 273 KNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETL 319
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 16/244 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V YS LM G + G+ D LF+++K+K + + Y SLM G
Sbjct: 217 MDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKK--AIEPNVFTYSSLMDGLCKN 274
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EAME V + M V +++++ LC GK EA++ DRMK + P
Sbjct: 275 GGSLEAMELLEMMVRKRHKPNM--VTYSTLINGLCKEGKLAEAVETLDRMKLQGLKP--- 329
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF------NNLIDQ-LCKNG 173
+ G + + +G+C +F++A +M + SP+ +++ NN++ Q LC NG
Sbjct: 330 --DAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNG 387
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
L + +LY M +G++ D T+ L+ + + A F +MV G P+ +++
Sbjct: 388 NLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWS 447
Query: 234 RLVG 237
+VG
Sbjct: 448 AVVG 451
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 150/313 (47%), Gaps = 37/313 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-VYGSLMKGYFM 59
M KG D V Y ++ G + GD+D F L ++++ G + GV +Y +++ G
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ---GKLEPGVLIYNTIIDGLCK 63
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNP-- 116
++A+ + E E ++ + V +S++ LCN G++ +A +L D ++ + NP
Sbjct: 64 YKHMDDALNLFKEM--ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121
Query: 117 ---------------------------PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+ + ++ +++ + +G+C R +A ++F
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M C PD +++N LI CK + E E++ EMS +G+ + TY +L+ F+
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKF 268
D F++MV G+ PN+ YN L+ L + G L++A F+ + + K++ +Y
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 301
Query: 269 MMKALSDGGKLDE 281
M++ + GK+++
Sbjct: 302 MIEGMCKAGKVED 314
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 9/292 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D V YG ++ G +G + A N+ E ++ + N+++D LC D
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM--EQGKLEPGVLIYNTIIDGLCKYKHMD 68
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+AL LF M+ + P N+ +++ + C GR+ DA + M E + +PD +
Sbjct: 69 DALNLFKEMETKGIRP-----NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 123
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
F+ LID K G L EAE+LY EM + ++P TY L++ +R+D+ F MV
Sbjct: 124 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 183
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
P++ YN L+ + ++E F M ++ L + +Y +++ L G D
Sbjct: 184 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 243
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
EI ++ DG + G L K G+ E+ + + E +R K E
Sbjct: 244 MAQEIFKEMVSDGVPPNIMTYNTLLDG-LCKNGKLEKAMVVFEYLQRSKMEP 294
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 11/230 (4%)
Query: 9 DP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP V YS L+ GF D ++FE + K D V Y +L+KG+ EE
Sbjct: 153 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK--HCFPDVVTYNTLIKGFCKYKRVEEG 210
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
ME + E + + V N ++ L G D A ++F M ++ PP N+ +
Sbjct: 211 MEVFREM--SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP-----NIMT 263
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + DG C G+ + A+ VF + + P ++N +I+ +CK G + + +L+ +S
Sbjct: 264 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 323
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
KGV PD Y ++ ++ F++M + G PN YN L+
Sbjct: 324 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 373
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 6/179 (3%)
Query: 104 LKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFN 163
+ L DRM + P +L ++ V+ +G C +G A + KM + + P L +N
Sbjct: 1 MALIDRMVAKGCQP-----DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 55
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
+ID LCK + +A L+ EM KG+ P+ TY L+ R D + M++
Sbjct: 56 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 115
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ P++ ++ L+ V+ G L EA+ +D MVK+ + +Y ++ +LDE
Sbjct: 116 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 156/346 (45%), Gaps = 27/346 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEE--LKEKLGGVVSDGVVYGSLMKGYF 58
M K D V +S L+ GF G + F LF E LK + ++ +L K
Sbjct: 234 MIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGN 293
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+KG + + E V N V +S++D C + ++A + + + P
Sbjct: 294 LKGAKNMLVVMMKEGVMPN------VVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP- 346
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N S+ M +G+C +A+ +F M +PD +++N+LID LCK+G ++ A
Sbjct: 347 ----NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYA 402
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EL EM D G + +TY L+DA + + VD +K+ D G++P++ +N L+
Sbjct: 403 WELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYG 462
Query: 239 LVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
L +VG L A+ F D++ K ++ +Y M+ L G DE ++ + D+G I
Sbjct: 463 LCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPD 522
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAA 343
+ + ++ L K E EKAE RE A +
Sbjct: 523 AVTYETLIQA-------------LFHKDENEKAEKLLREMIARDVV 555
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 140/326 (42%), Gaps = 45/326 (13%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G D ++ L+ + + + F + ++ + G D + + +L+KG + G
Sbjct: 97 HGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKM--GYEPDTITFNTLIKGLCLNGKV 154
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA+ ++ + + + ++++ LC G+ AL++ ++ K + +N
Sbjct: 155 KEALHFHDHVLA--LGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDG-----KLVKIN 207
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +N + D C DA E++ +M + SPD ++F+ LI C G L EA L+
Sbjct: 208 VVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFR 267
Query: 184 EMSDKGVNPDEYTYGLLMDA-CFE----------------------------------VN 208
EM K +NPD YT+ +L+DA C E VN
Sbjct: 268 EMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVN 327
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYK 267
+V+ + G PN Y ++ ++ M+DEA S F D+ K + D +Y
Sbjct: 328 QVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYN 387
Query: 268 FMMKALSDGGKLDEILEIVGGILDDG 293
++ L G++ E+V + D+G
Sbjct: 388 SLIDGLCKSGRISYAWELVDEMHDNG 413
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 134/269 (49%), Gaps = 17/269 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K F D Y+ L+ GD DG L E+ + VV D + ++ G K +
Sbjct: 380 KRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQN--NVVLDTNTHTIMIHGLCKKQLV 437
Query: 64 EEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
+EAM+ ++ V G + +V + N ++D L + +EA LF +M+ +NP L
Sbjct: 438 DEAMQVFDGMVEVGCHPTV----MTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLR 493
Query: 122 VNLG--------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
+ LG S + D C G+ A ++ R + + PD +++N L++ LCK
Sbjct: 494 LTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVR 553
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
L A L+ E+ KG + DE TYG L+D+ +R +D T F+ ++ G P+L++YN
Sbjct: 554 NLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYN 613
Query: 234 RLVGKLVQVGMLDEAKSF-FDIMVKKLKM 261
++ L ++ L +A +F FD ++KK +
Sbjct: 614 SIMRSLCRMNKLSQAINFWFDHLLKKYNL 642
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 135/310 (43%), Gaps = 46/310 (14%)
Query: 10 PVVYSYLMLGFVRDGDSDGVFRLFEELKE-KLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
P+++S ++ + D+D +++ + + + G+ + +L+ + G EA++
Sbjct: 101 PLLHSRAVVPILLATDADAA--MYDAIADAQAAGLQPPAAAFEALIFAHASAGRHHEAVD 158
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
++ GE + V N + + + G AL L++RM P R ++N
Sbjct: 159 AFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNR-----ATYN 213
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
V+ DG C +G DA+++F +M + +P+ + L+ +C G L EAE L M DK
Sbjct: 214 VLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDK 273
Query: 189 GVNPDEYTY-----GL-------------------------------LMDACFEVNRVDD 212
G PDE TY GL L+D F R ++
Sbjct: 274 GCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEE 333
Query: 213 G-ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
G Y + + P++ +Y ++ + G +D+A +FFD M K+ D Y ++
Sbjct: 334 GFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLL 393
Query: 271 KALSDGGKLD 280
KAL D G LD
Sbjct: 394 KALCDSGDLD 403
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 135/309 (43%), Gaps = 21/309 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + ++ L+ G L +++K G D V Y + + G
Sbjct: 235 MLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDK--GCPPDEVTYNAFLSGLCKA 292
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+E EA+ + + + ++D L G+++E + + + + +
Sbjct: 293 GRVDEAIE-RLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQAD----F 347
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ + +M G GR DA F +M E R +PDT +N L+ LC +G L A
Sbjct: 348 SPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARS 407
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM+ V D T+ +++ + VD+ F MV+ G P + YN L+ L
Sbjct: 408 LMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLY 467
Query: 241 QVGMLDEAKSFFDIM--------VKKLKM------DDASYKFMMKALSDGGKLDEILEIV 286
+ L+EA+ F M +L + D S + ++ ++ G++ + +++
Sbjct: 468 RAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLL 527
Query: 287 GGILDDGGI 295
GI+D G +
Sbjct: 528 RGIMDSGVV 536
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 37/205 (18%)
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+F + + GR +A++ F +M GE+ C P T +N ++ L +G
Sbjct: 138 AAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASG---------- 187
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
GV P + +MV +G PN A YN L+ L + G
Sbjct: 188 -----GVVPL-------------------ALALYNRMVAAGCLPNRATYNVLMDGLCKRG 223
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+A FD M+++ + + ++ ++ ++ + G+L E ++ + D G
Sbjct: 224 TAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYN 283
Query: 303 EFVKGELSKEGREEEVVKLMEKKER 327
F+ G L K GR +E ++ +E R
Sbjct: 284 AFLSG-LCKAGRVDEAIERLEALRR 307
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++GD +F+ + + G+ V Y +LM GY G
Sbjct: 131 GYPASLYFFNILMHRFCKEGDIRLAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLN 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + ++ S V+ + +++ LC K D+A +LF+ M K L N
Sbjct: 189 EGFKL--KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEML-----VKGLVPNG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+EV+++M PD +++N LI LCK G L +A +L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 362 SVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKG 395
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LFEE+ K G+V +GV + +L+ G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVK--GLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G ++A L D M + P ++
Sbjct: 255 GRVDLAMEVYKQMLSQ--SLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ PD TY ++++ + V G+ ++M G P++
Sbjct: 368 MMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 104/263 (39%), Gaps = 18/263 (6%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + F EA L + + AV +
Sbjct: 6 NSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKGNQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DA+E +R E++ + +++ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWAFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP++ YN L+ +++G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L+E M ++ D +Y ++ L K+D+ E+ +L G +
Sbjct: 186 DLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFT 245
Query: 303 EFVKGELSKEGREE---EVVKLM 322
+ G K GR + EV K M
Sbjct: 246 TLIDGH-CKNGRVDLAMEVYKQM 267
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 155/334 (46%), Gaps = 17/334 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D VVYS L+ GF G D LF+E+ EK G+ + VVY L+ G+ KG+
Sbjct: 74 KGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEK--GISPNVVVYSCLINGFCKKGLW 131
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA + ++ ++ LC +G+ +AL LFD M + P +
Sbjct: 132 REATAVLHTMT--ERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV--- 186
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++NV+ +G C +G DA ++F M E + +S+N LI LC NG L EA +L+
Sbjct: 187 --TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFS 244
Query: 184 EMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ + G V PD T+ ++ + R+D + M++ G NL + L+G+ ++
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIK 304
Query: 242 VGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE-FSEE 300
G++D+A + V KL + +S + + DG +L G+ I S
Sbjct: 305 SGIIDKAMELWK-RVHKLGLVPSSTTY--SVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361
Query: 301 LQEF--VKGELSKEGREEEVVKLMEKKEREKAEA 332
L ++ + L KE E+ +L ++ + E
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESNCEP 395
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 143/323 (44%), Gaps = 33/323 (10%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V Y+ L+ G ++G F++FE + EK G + V Y +L+ G G
Sbjct: 179 KGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEK--GKRLEVVSYNTLIMGLCNNGKL 236
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAM+ ++ + + + V+ + N+V+ LC G+ D+A++++D M + +
Sbjct: 237 DEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCH 296
Query: 124 L------------------------------GSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
+ +++VM DG+C A +F +M
Sbjct: 297 ILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKIS 356
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
SP +N L+ LCK L +A L+ EM + PD ++ +++D + +
Sbjct: 357 GLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSA 416
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKA 272
M GL P+ Y+ + +L ++G ++EAK FD M+ + D+ Y ++K
Sbjct: 417 KELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKG 476
Query: 273 LSDGGKLDEILEIVGGILDDGGI 295
+++E++ ++ + D G I
Sbjct: 477 FGLNDEIEEVINLLRQMADMGVI 499
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 156/351 (44%), Gaps = 40/351 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK------------LGGVVSDG- 47
M KG + VVYS L+ GF + G + + E+ +GG+ DG
Sbjct: 106 MLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGR 165
Query: 48 --------------------VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
V Y L+ G +G +A + + + + ++ V+
Sbjct: 166 ARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGK--RLEVVSY 223
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+++ LCNNGK DEA+KLF + + N + ++ +FN + G C +GR A+E++
Sbjct: 224 NTLIMGLCNNGKLDEAMKLFSSLLEDGN---YVEPDVITFNTVIQGLCKEGRLDKAVEIY 280
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M E + + + LI + K+G++ +A EL+ + G+ P TY +++D ++
Sbjct: 281 DTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKM 340
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+ ++ F +M SGL P L YN L+ L + L++A+ F M + + D S+
Sbjct: 341 HMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISF 400
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
M+ G + E++ + G + F+ LSK G+ EE
Sbjct: 401 NIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFIN-RLSKLGQMEE 450
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 154/327 (47%), Gaps = 17/327 (5%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+ D V Y+ ++ G ++ + L E++ + Y LM G +G EE
Sbjct: 6 ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEG--SSCEPNSFTYCILMDGLCKEGRVEE 63
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
AM E + +++ V ++++ C+ G D LFD M + P N+
Sbjct: 64 AMRLLGEM--KRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISP-----NVV 116
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ + +G+C +G +++A V M E PD ++ +I LCK+G +A +L+ M
Sbjct: 117 VYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLM 176
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
++KG P TY +L++ + + D F M++ G R + YN L+ L G L
Sbjct: 177 TEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKL 236
Query: 246 DEAKSFFDIMVKK---LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG--GIEFSEE 300
DEA F +++ ++ D ++ +++ L G+LD+ +EI +++ G G F+
Sbjct: 237 DEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCH 296
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKER 327
+ + GE K G ++ ++L ++ +
Sbjct: 297 I---LIGEYIKSGIIDKAMELWKRVHK 320
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 22/230 (9%)
Query: 14 SYLMLG-FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++++G +++ G D L++ + KLG +V Y ++ G+ M N
Sbjct: 295 CHILIGEYIKSGIIDKAMELWKRV-HKLG-LVPSSTTYSVMIDGFC-------KMHMLNF 345
Query: 73 AVGENSSVKMSAVAN-----NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
A G S +K+S ++ N+++ +LC ++A +LF MK + P + SF
Sbjct: 346 AKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTI-----SF 400
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N+M DG G A E+ M + +PD ++++ I++L K G + EA+ + M
Sbjct: 401 NIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIA 460
Query: 188 KGVNPDEYTYGLLMDACFEVN-RVDDGATYFRKMVDSGLRPNLAVYNRLV 236
G+ PD + Y L+ F +N +++ R+M D G+ +L + N ++
Sbjct: 461 SGITPDNHVYDSLIKG-FGLNDEIEEVINLLRQMADMGVILDLEITNSIL 509
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 139/284 (48%), Gaps = 10/284 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G +G + ++E L +K G + YG L+ G G +A++ +
Sbjct: 362 VSYNILIKGLFENGKVEEAISIWELLCKK--GCRPESTTYGVLIHGLCKNGRLNKALKIF 419
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
EA E+ K+ A A +S++D LC G+ DEA+ + ++M + ++ N +
Sbjct: 420 KEA--EDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDK-----RGYKLDPHVCNPL 472
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ + +DAI FR+M CSP +S+N LI LCK +EA EM +K
Sbjct: 473 INGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEW 532
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD T LLMD + +++ +++ +D G +P++ +YN L+ L V L++A
Sbjct: 533 KPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQ 592
Query: 251 FFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ M + + + + +M+ L ++ EI IL DG
Sbjct: 593 LYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDG 636
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 143/326 (43%), Gaps = 43/326 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG---GVVS------------ 45
M V+G VAD Y+ L+ GF + GD D ++E L + VV+
Sbjct: 212 MSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCG 271
Query: 46 -------------------DGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVA 86
D Y SL+ G G + A+ Y E V SS+ + AV
Sbjct: 272 RFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIV--ESSLVVDAVT 329
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
+N++L+ C GK E+ +L+ M E+ + S+N++ G G+ ++AI +
Sbjct: 330 HNAMLNGFCRAGKIKESFELWMVMGKEN------CQTVVSYNILIKGLFENGKVEEAISI 383
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
+ + + C P++ ++ LI LCKNG L +A +++ E D D Y Y ++D +
Sbjct: 384 WELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCK 443
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDAS 265
R+D+ + +M G + + V N L+ V+ L++A +FF M K S
Sbjct: 444 EGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVS 503
Query: 266 YKFMMKALSDGGKLDEILEIVGGILD 291
Y ++K L + E V +L+
Sbjct: 504 YNTLIKGLCKAERFSEAYSFVKEMLE 529
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 107/233 (45%), Gaps = 9/233 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G+ DP V + L+ GFVR + F E++ K G V Y +L+KG
Sbjct: 460 RGYKLDPHVCNPLINGFVRASKLEDAINFFREMECK--GCSPTIVSYNTLIKGLCKAERF 517
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E + + M + + ++D LC K + AL L+ + ++ P +
Sbjct: 518 SEAYSFVKEMLEKEWKPDM--ITCSLLMDGLCQEKKIEMALNLWQQALDKGFKP-----D 570
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +N++ G C + +DA++++ M C P+ ++ N L++ L K +A E++
Sbjct: 571 ITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWD 630
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ G++PD +Y + + +R+ D + ++ G+ P +N LV
Sbjct: 631 CILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILV 683
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 148/328 (45%), Gaps = 21/328 (6%)
Query: 6 FVADPVVYSY--LMLGFVRDGDSD---GVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
F P V SY L+ FV + D R FE + V + Y L+K K
Sbjct: 110 FGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESM-----DVSPNLQTYNILIKISCKK 164
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E+A+ + +N +K + ++++ + G ALK+FD M + +
Sbjct: 165 QQIEKAISLLDWMWSQN--LKPDVFSYGTLINGMVKVGDLLGALKVFDEMS-----VRGV 217
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS--PDTLSFNNLIDQLCKNGMLAEA 178
++ +N++ DG+ G + E++ ++ + CS P+ +++N +I+ LCK G E+
Sbjct: 218 VADVTCYNMLIDGFFKHGDYDKGKEIWERLVK-DCSVYPNVVTYNIMINGLCKCGRFDES 276
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E++ M+ D +TY L+ E +D ++++V+S L + +N ++
Sbjct: 277 LEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNG 336
Query: 239 LVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ G + E+ + +M K+ SY ++K L + GK++E + I + G S
Sbjct: 337 FCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPES 396
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKE 326
+ G L K GR + +K+ ++ E
Sbjct: 397 TTYGVLIHG-LCKNGRLNKALKIFKEAE 423
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 112/234 (47%), Gaps = 14/234 (5%)
Query: 52 SLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEA---LKLFD 108
+++K Y M +A++ + + + + K + N++L+A ++D A + F+
Sbjct: 85 TVIKAYAKNKMSNKALDTF-QNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFE 143
Query: 109 RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
M ++ NL ++N++ C + + + AI + M PD S+ LI+
Sbjct: 144 SMD--------VSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLING 195
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV-DSGLRP 227
+ K G L A +++ EMS +GV D Y +L+D F+ D G + ++V D + P
Sbjct: 196 MVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYP 255
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLD 280
N+ YN ++ L + G DE+ ++ M K + D +Y ++ L + G +D
Sbjct: 256 NVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNID 309
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++GD +F+ + + G+ V + +LM GY G +
Sbjct: 135 GYPASLYFFNILMHRFCKEGDIRVALSVFDAITK--WGLRPSVVSFNTLMNGYIRLGDLD 192
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++ S V+ + +++ LC K D+A +LFD M + K L N
Sbjct: 193 EGFRL--KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD-----KGLVPNG 245
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+EV+++M SPD +++N LI LCK G L +A++L E
Sbjct: 246 VTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 305
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG+ PD+ +Y L+D C + ++ + ++M+ +R + Y L+ L Q G
Sbjct: 306 MRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 365
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ L+ D +Y ++ G
Sbjct: 366 SIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKG 399
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 117/236 (49%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ +K G+V +GV + +L+ G+
Sbjct: 201 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDK--GLVPNGVTFTTLIDGHCKN 258
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M+ + P ++
Sbjct: 259 GRVDLAMEVYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKI 316
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
S+ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 317 -----SYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEK 371
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 372 MLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLM 427
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 104/263 (39%), Gaps = 18/263 (6%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 10 NSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAILETQGTQRSD 69
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 70 IYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYK 129
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP++ +N L+ +++G
Sbjct: 130 EILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLG 189
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M ++ D +Y ++ L K+D+ E+ +LD G +
Sbjct: 190 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFT 249
Query: 303 EFVKGELSKEGREE---EVVKLM 322
+ G K GR + EV K M
Sbjct: 250 TLIDGH-CKNGRVDLAMEVYKQM 271
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 37/312 (11%)
Query: 8 ADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
DP V YS ++ G+ + F LF ++ L G ++ + L+KG FM+G E
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMF--LRGCDANIHTFTPLIKGCFMRGKLYE 332
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV--- 122
A++ + + + + + VA N+++ LC+NG +EAL++ D+M+ P
Sbjct: 333 ALDLWKLMIQD--GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSIL 390
Query: 123 ---------------------------NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
N+ ++ M D C F A + KM C
Sbjct: 391 IDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGC 450
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+P+T++FN I LC NG + A +L M G P+ TY L+DA F +N+ ++
Sbjct: 451 TPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFG 510
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALS 274
F+++ L+PNL YN ++ + GM+ EA F +V+ D +Y M+ A
Sbjct: 511 LFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYC 570
Query: 275 DGGKLDEILEIV 286
GK+ ++V
Sbjct: 571 KQGKVKIAAQLV 582
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 148/351 (42%), Gaps = 51/351 (14%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
+Y++L+ + + + L+ +K+ G++ + Y L+K + A + +
Sbjct: 146 IYNHLLDALLSENKFQMINPLYTNMKKD--GLIPNVFTYNILLKALCKNDRVDAAHKLFV 203
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E N AV +++ +LC GK D+A +L R K ++ +N +
Sbjct: 204 EM--SNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP----------SVPVYNALI 251
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
DG C +GR + AI++ +M + P+ +S++ +I+ LC +G + A L+ +M +G +
Sbjct: 252 DGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCD 311
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
+ +T+ L+ CF ++ + ++ M+ G PN+ YN L+ L G L+EA
Sbjct: 312 ANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV 371
Query: 252 FDIMVKK------------------------------------LKMDDASYKFMMKALSD 275
D M + + + +Y M+ L
Sbjct: 372 CDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCK 431
Query: 276 GGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
D+ +V + +G + F+KG L GR E +KL+E+ +
Sbjct: 432 NSMFDQANSLVEKMTLEGCTPNTITFNTFIKG-LCGNGRVEWAMKLLERMQ 481
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 19/256 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y+ ++ ++ D L E K L G + + + + +KG
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVE--KMTLEGCTPNTITFNTFIKGLCGN 467
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E AM+ G ++ N +LDAL K++EA LF ++ + L
Sbjct: 468 GRVEWAMKLLERMQGHGCLPNITTY--NELLDALFRMNKYEEAFGLFQEIE-----ARNL 520
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL ++N + G+ G +A+++F K +PD++++N +I CK G + A +
Sbjct: 521 QPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQ 580
Query: 181 LYGEMSD-KGVNPDEYTY-GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV-- 236
L +S K +PD TY L+ AC +N +++ + K ++ G+ PN A +N LV
Sbjct: 581 LVERVSSMKEWHPDIITYTSLIWGACNWMN-IEEAMAFLDKAINQGICPNFATWNALVRC 639
Query: 237 -----GKLVQVGMLDE 247
G + + +LD+
Sbjct: 640 FFDSLGHMGPIHILDD 655
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F + +GY G + A+++F ++GE+ C P +N+L+D L LY M
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G+ P+ +TY +L+ A + +RVD F +M + G P+ Y +V L + G +D
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231
Query: 247 EAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+A+ + + K Y ++ + G+++ ++++G ++D+G
Sbjct: 232 DARE----LAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 142/299 (47%), Gaps = 12/299 (4%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
VKG D ++ L+ + GD RLFEE+K G D V Y +L+ G
Sbjct: 292 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN--SGCTPDEVTYNTLIDNLCSLGK 349
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A++ + E++ S + N+++D LC + +EA ++FD+M + ++
Sbjct: 350 LGKALDLLKDM--ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG-----ISR 402
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +FN + DG C + DA E+ +M P+ +++N+++ CK G + +A ++
Sbjct: 403 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 462
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M+ G D TYG L++ + R R M G+RP YN ++ L +
Sbjct: 463 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 522
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSD-GGKLDEILEIVGGILDDGGI-EFS 298
+ +A S F M + + DA +YK + + L GG + E + + ++D G I EFS
Sbjct: 523 NNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 581
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 137/284 (48%), Gaps = 12/284 (4%)
Query: 9 DPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP V++Y ++ ++G + + ++ ++ G + D + +L+ EEA
Sbjct: 226 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR--GCLPDITTFNTLIAALCTGNRLEEA 283
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
++ + + S + N +++ALC G AL+LF+ MKN P + +
Sbjct: 284 LDLARQVTVKGVSPDVYTF--NILINALCKVGDPHLALRLFEEMKNSGCTPDEV-----T 336
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + D C G+ A+++ + M C T+++N +ID LCK + EAEE++ +M
Sbjct: 337 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 396
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+G++ + T+ L+D + ++DD +M+ GL+PN YN ++ + G +
Sbjct: 397 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 456
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
+A + M ++D +Y ++ L G+ L+++ G+
Sbjct: 457 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 500
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 143/318 (44%), Gaps = 11/318 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V ++ LM R + EE+ + GV D + +LM+G+ +
Sbjct: 80 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSR--GVAPDETTFTTLMQGFVEE 137
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A+ + S + V N +++ C G+ ++AL + + P ++
Sbjct: 138 GSIEAALRVKARMLEMGCSA--TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 195
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N +G C A++V M + PD ++N +++ LCKNG L EA+
Sbjct: 196 -----TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKG 250
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +M D+G PD T+ L+ A NR+++ R++ G+ P++ +N L+ L
Sbjct: 251 ILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALC 310
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+VG A F+ M D+ +Y ++ L GKL + L+++ + G +
Sbjct: 311 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTI 370
Query: 300 ELQEFVKGELSKEGREEE 317
+ G L K+ R EE
Sbjct: 371 TYNTIIDG-LCKKMRIEE 387
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 14/276 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG--GVVSDGVVYGSLMKGYFMKGM 62
G AD VVY++L L + +G +L E + ++G G+ D V + +LMK
Sbjct: 49 GIQADTVVYNHL-LNVLVEGSK---MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQ 104
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
A+ E + V +++ G + AL++ RM ++ V
Sbjct: 105 VRTAVLMLEEM--SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 162
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N V+ +GYC GR +DA+ ++ PD +++N ++ LC+N + A ++
Sbjct: 163 N-----VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVM 217
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M +G +PD +TY ++++ + ++++ +MVD G P++ +N L+ L
Sbjct: 218 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 277
Query: 243 GMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGG 277
L+EA + VK + D ++ ++ AL G
Sbjct: 278 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 313
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 41/256 (16%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E VK+ V +S LD+ FD+A+ D + N+ P + + +N + +
Sbjct: 11 EGHQVKLGVV--HSFLDSYEGQQLFDDAV---DLILNQLQPLFGIQADTVVYNHLLNVLV 65
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+ K V+ +MG PD ++FN L+ LC+ + A + EMS +GV PDE
Sbjct: 66 EGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDET 125
Query: 196 TYGLLMDACFE-----------------------------------VNRVDDGATYFRKM 220
T+ LM E + RV+D Y ++
Sbjct: 126 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 185
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKL 279
+ G P+ YN V L Q + A D+MV++ D +Y ++ L G+L
Sbjct: 186 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 245
Query: 280 DEILEIVGGILDDGGI 295
+E I+ ++D G +
Sbjct: 246 EEAKGILNQMVDRGCL 261
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 137 GYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++ S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 195 EGFRL--KSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEML-----VKGLVPNX 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCK G L +A +L E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +B + +M++ +R + Y L+ L Q G
Sbjct: 308 MSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGR 367
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
+A+ M+ LK D +Y ++ G
Sbjct: 368 XVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKG 401
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V + V + +L+ G+
Sbjct: 203 MXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVK--GLVPNXVTFTTLIDGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N ++ LC G +A L M + P ++
Sbjct: 261 GRVDLAMEIYKQMLSQ--SLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKI 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E +M E D +++ LI LC+ G +AE+
Sbjct: 319 -----TYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ M G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 374 MLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 98/204 (48%), Gaps = 13/204 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG V + V ++ L+ G ++G D +++++ + ++ D + Y L+ G K
Sbjct: 238 MLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ--SLLPDLITYNXLIYGLCKK 295
Query: 61 GMEEEAMECYNEAVGENS--SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G ++A N+ + E S +K + +++D C G B A + RM E+
Sbjct: 296 GDLKQA----NDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEEN---- 347
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ ++ ++ + G C +GR DA ++ R M PD ++ +I++ CK G + +
Sbjct: 348 -IRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKG 406
Query: 179 EELYGEMSDKGVNPDEYTYGLLMD 202
+L EM G P TY +LM+
Sbjct: 407 SKLLKEMQRDGHVPSVVTYNVLMN 430
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E+
Sbjct: 75 FSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLKYFKLVWGFYKEIL 134
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP++ YN L+ +++G LD
Sbjct: 135 ECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E M ++ D +Y ++ L K+D+ E+ +L G + +
Sbjct: 195 EGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLI 254
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 255 DGH-CKNGR 262
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++GD +F+ + + G+ V + +LM GY G +
Sbjct: 118 GYPASLYFFNILMHRFCKEGDIRLAQSVFDAITK--WGLRPSVVSFNTLMNGYIRLGDLD 175
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N S V+ + +++ LC K D+A +LFD M + K L N
Sbjct: 176 EGFRLKNAM--HASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD-----KGLVPNG 228
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N L LCK G L +A +L E
Sbjct: 229 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDE 288
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + ++ + ++M+ +R + VY L+ L Q G
Sbjct: 289 MSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGR 348
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 349 SVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKG 382
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 9/220 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ +K G+V +GV + +L+ G+
Sbjct: 184 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDK--GLVPNGVTFTTLIDGHCKN 241
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N++ LC G +A L D M + P ++
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 299
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D + + LI LC+ G +AE+
Sbjct: 300 -----TYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEK 354
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+ EM G+ P+ TY ++++ + V G+ ++M
Sbjct: 355 MLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEM 394
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ +++ L K Y E+
Sbjct: 56 FSGLITXYLESGFLRDAIECYRLTREHKFWVPLDXCRKVLEHLMKLKYFKLVWGFYKEIL 115
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP++ +N L+ +++G LD
Sbjct: 116 ECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLD 175
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E + M ++ D +Y ++ L K+D+ E+ +LD G + +
Sbjct: 176 EGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLI 235
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 236 DGH-CKNGR 243
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 26/297 (8%)
Query: 43 VVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS----VKMSAVANNSVLDALCNNG 98
VV+ G++ L K + +EA++ ++ G+ S V+ V N+++D LC G
Sbjct: 316 VVTFGILVNHLCKARRI----DEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVG 371
Query: 99 KFDEALKLFDRMK--NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
K ++ L L + MK N + P N ++N + DG+ G F A E+FR+M E
Sbjct: 372 KEEDGLSLLEEMKMGNINRP------NTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQ 425
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P+ ++ N L+D LCK+G + A E + EM KG+ + TY L+ A VN ++
Sbjct: 426 PNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQC 485
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASYKFMMK 271
F +M+ SG P+ VY L+ L G +++A ++V KLK +D + Y ++
Sbjct: 486 FEEMLSSGCSPDAVVYYSLISGLCIAGRMNDA----SVVVSKLKLAGFSLDRSCYNVLIS 541
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
KL+ + E++ +++ G++ + L K G K+MEK +E
Sbjct: 542 GFCKKKKLERVYELLTE-MEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKE 597
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 131/320 (40%), Gaps = 47/320 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGV-VSDGVVYGSLMKGYFMKGME 63
G D V+++ L+ G + G + L EE+K +G + + V Y L+ G+F G
Sbjct: 352 GVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMK--MGNINRPNTVTYNCLIDGFFKAGNF 409
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A E + + E V+ + + N+++D LC +G+ A++ F+ MK K L N
Sbjct: 410 DRAHELFRQMNEE--GVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKG-----KGLKGN 462
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE---- 179
++ + +CG A++ F +M CSPD + + +LI LC G + +A
Sbjct: 463 AATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVS 522
Query: 180 -------------------------------ELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
EL EM + GV PD TY L+ +
Sbjct: 523 KLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTG 582
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM--VKKLKMDDASY 266
+ KM+ GLRP++ Y ++ +DE F M K+ + Y
Sbjct: 583 DFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIY 642
Query: 267 KFMMKALSDGGKLDEILEIV 286
++ AL +D + ++
Sbjct: 643 NILIDALCRNNDVDRAISLM 662
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 143/351 (40%), Gaps = 71/351 (20%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
+ V Y+ L+ GF + G+ D LF ++ E+ GV + + +L+ G G A+
Sbjct: 391 PNTVTYNCLIDGFFKAGNFDRAHELFRQMNEE--GVQPNVITLNTLVDGLCKHGRVHRAV 448
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL------- 120
E +NE G+ +K +A +++ A C + A++ F+ M + P +
Sbjct: 449 EFFNEMKGK--GLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLIS 506
Query: 121 -----------------------AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
+++ +NV+ G+C + + + E+ +M E P
Sbjct: 507 GLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKP 566
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
DT+++N LI L K G A A ++ +M +G+ P TYG ++ A VD+G F
Sbjct: 567 DTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIF 626
Query: 218 RKMVDSG------------------------------------LRPNLAVYNRLVGKLVQ 241
+M + +RPN YN ++ +
Sbjct: 627 GEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRD 686
Query: 242 VGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
ML +A D MV++ + D + + + + LS G+++++ V G D
Sbjct: 687 KKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQD 737
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 108/254 (42%), Gaps = 10/254 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D VVY L+ G G + + +LK L G D Y L+ G+ K
Sbjct: 489 MLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLK--LAGFSLDRSCYNVLISGFCKK 546
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E E E E + VK + N+++ L G F A K+ ++M E P
Sbjct: 547 KKLERVYELLTEM--EETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRP--- 601
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ ++ + YC + + +++F +M + P+T+ +N LID LC+N + A
Sbjct: 602 --SVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAI 659
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L +M K V P+ TY ++ + + +MV+ RP+ L L
Sbjct: 660 SLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWL 719
Query: 240 VQVGMLDEAKSFFD 253
VG +++ K F +
Sbjct: 720 SAVGEIEKLKHFVE 733
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 120 LAVNLGSFNVMADGY---------CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLC 170
L LG V DG+ CG + A EV + + D S N L+ L
Sbjct: 233 LVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLG 292
Query: 171 KNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS------G 224
+ + EL EM + + P T+G+L++ + R+D+ F ++ G
Sbjct: 293 RGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVG 352
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM------DDASYKFMMKALSDGGK 278
+ P++ ++N L+ L +VG ++ S +++++KM + +Y ++ G
Sbjct: 353 VEPDVVLFNTLIDGLCKVGKEEDGLS----LLEEMKMGNINRPNTVTYNCLIDGFFKAGN 408
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
D E+ + ++G L V G L K GR V
Sbjct: 409 FDRAHELFRQMNEEGVQPNVITLNTLVDG-LCKHGRVHRAV 448
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 128/274 (46%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRJAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 177
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ C K D+A +LFD M K L N
Sbjct: 178 EGFRLKSAMLA--SGVQPDVYTYSVLINGXCKESKXDDANELFDEML-----VKGLVPNX 230
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
F + DG+C GR A+E++++M SPD +++N LI LCK G L +A L E
Sbjct: 231 VXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 290
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +D + ++M+ R + Y L+ L G
Sbjct: 291 MSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGR 350
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 351 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 384
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V + V + +L+ G+
Sbjct: 186 MLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVK--GLVPNXVXFTTLIDGHCKN 243
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 244 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKI 301
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D + + LI LC G +AE+
Sbjct: 302 -----TYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEK 356
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 357 MLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG V + V ++ L+ G ++G D +++++ + + D + Y +L+ G K
Sbjct: 221 MLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQ--SLSPDLITYNTLIYGLCKK 278
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A +E +K + +++D C G D A + RM E+ +
Sbjct: 279 GDLKQAHHLIDEM--SXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEV 336
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ + G C +GR DA ++ R+M PD ++ +I++ CK G + + +
Sbjct: 337 X-----YTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSK 391
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L EM G P TY +LM+
Sbjct: 392 LLKEMQRDGHVPSVVTYNVLMN 413
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 2/193 (1%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+J F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 54 DJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 113
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
E+ + G Y + +LM + + + F + GLRP++ YN L+ +++
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 173
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G LDE M+ ++ D +Y ++ K D+ E+ +L G +
Sbjct: 174 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXF 233
Query: 302 QEFVKGELSKEGR 314
+ G K GR
Sbjct: 234 TTLIDGH-CKNGR 245
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLN 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 195 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDDANELFDEML-----VKGLIPNG 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI L K G L +A +L E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD++TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 308 MSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK DD +Y ++ G
Sbjct: 368 SVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKG 401
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G++ +GV + +L+ G+
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLIPNGVTFTTLIDGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + + + N+++ L G +A L D M + P +
Sbjct: 261 GRVDLAMEIYKQMLSQ--CLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKF 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 319 -----TYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD+ TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 374 MLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG + + V ++ L+ G ++G D +++++ + ++ D + Y +L+ G K
Sbjct: 238 MLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQC--LLPDLITYNTLIYGLXKK 295
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A + +E +K +++D C G D A + RM E+ +
Sbjct: 296 GDLKQAHDLIDEM--SMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQEN-----I 348
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + G C +GR DA ++ R+M PD ++ +I++ CK G + + +
Sbjct: 349 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSK 408
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L EM G P TY +LM+
Sbjct: 409 LLKEMQRDGHVPSVVTYNVLMN 430
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 2/186 (1%)
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ Y G +DAIE +R E++ + +++ L K Y E+ + G
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
Y + +LM + + + F + GLRP++ YN L+ +++G L+E
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGF 197
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGE 308
M+ ++ D +Y ++ L K+D+ E+ +L G I + G
Sbjct: 198 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGH 257
Query: 309 LSKEGR 314
K GR
Sbjct: 258 -CKNGR 262
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 158/356 (44%), Gaps = 46/356 (12%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V+SY L+ G + S L + + G D V Y +++ G+F +G ++
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTY 108
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
YNE + + + + V NS++ ALC D+A+++ M P + ++
Sbjct: 109 STYNEMLDQR--ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCM-----TY 161
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + G+C G+ K+AI +KM PD +++N+L+D LCKNG EA +++ M+
Sbjct: 162 NSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTK 221
Query: 188 KGVNPDEYTYGLLMD------ACFEVN-----------------------------RVDD 212
+G+ P+ TYG L+ A E++ +V++
Sbjct: 222 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEE 281
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
F KM GL PN Y ++G L + G +++A +F+ M+ + L + Y ++
Sbjct: 282 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 341
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
L K + E++ +LD GI + + KEGR E KL + R
Sbjct: 342 GLCTCNKWERAEELILEMLDR-GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 396
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 136/279 (48%), Gaps = 10/279 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y ++ + G + FE++ ++ G+ +VY SL+ G
Sbjct: 292 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE--GLSPGNIVYNSLIHGLCTCNKW 349
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A E E + + + ++ + NS++D+ C G+ E+ KLFD M P +
Sbjct: 350 ERAEELILEML--DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP-----D 402
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +++ + DGYC G+ +A ++ M PD ++++ LI+ CK + +A L+
Sbjct: 403 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFR 462
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM GV+PD TY +++ F+ R + + SG + L+ YN ++ L +
Sbjct: 463 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNK 522
Query: 244 MLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ D+A + F ++ + LK++ ++ M+ AL G+ DE
Sbjct: 523 LTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 561
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 137/286 (47%), Gaps = 10/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V+S L+ + + + +F +++++ G+ + V YG+++
Sbjct: 254 MVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ--GLNPNAVTYGAVIGILCKS 311
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+AM + + + E S + NS++ LC K++ A +L M + + +
Sbjct: 312 GRVEDAMLYFEQMIDEGLSP--GNIVYNSLIHGLCTCNKWERAEELILEMLD-----RGI 364
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N FN + D +C +GR ++ ++F M PD ++++ LID C G + EA +
Sbjct: 365 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 424
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G+ PD TY L++ +++R+ D FR+M SG+ P++ YN ++ L
Sbjct: 425 LLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLF 484
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
Q AK + + K +++ ++Y ++ L D+ L +
Sbjct: 485 QTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRM 530
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE--YRCSPD 158
++A +FD + P ++ S+N++ +G C + R ++A+E+ M + C PD
Sbjct: 34 EDARHVFDELLRRGIP------DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPD 87
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
+S++ +I+ K G L + Y EM D+ ++P+ TY ++ A + VD
Sbjct: 88 VVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLT 147
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
MV SG+ P+ YN +V G EA F M ++ D +Y +M L G
Sbjct: 148 TMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 207
Query: 278 KLDE 281
+ E
Sbjct: 208 RCTE 211
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 9/277 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D + YS L+ G+ G D +L + G+ D V Y +L+ GY +
Sbjct: 398 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV--GMKPDCVTYSTLINGYCKISRMK 455
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ + E E+S V + N +L L + A +L+ + + L
Sbjct: 456 DALVLFREM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGR-----QLEL 508
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ G C DA+ +F+ + + +FN +ID L K G EA++L+
Sbjct: 509 STYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 568
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
S G+ P+ +TY L+ + +++ F M D+G + + N +V +L+Q G
Sbjct: 569 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 628
Query: 245 LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ A ++ ++ +K +AS + L GGK E
Sbjct: 629 ITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQE 665
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 16/335 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D V + L+L R D FR+FE++ ++ + V Y L+ G G E
Sbjct: 158 GFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKE-ESCRPNSVTYSILIHGLCEAGRLE 216
Query: 65 EAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA + E V G S + V ++ A C+ G D+A+K+ D M + P
Sbjct: 217 EAFQLKQEMVEKGCQPSTRTYTV----LIKAKCDIGMTDKAMKMLDEMATKACVP----- 267
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ ++ ++ D C +G+ ++A VFRKM ++ P ++FN LI+ CK G + A +L
Sbjct: 268 NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLL 327
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M P+ TY LM+ V++ R++VD+GL P+ YN LV +
Sbjct: 328 SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKE 387
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE-E 300
G L+ A + F+ M L+ D ++ ++ L G+L++ I+G ++ GI E
Sbjct: 388 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK-GISLDEVT 446
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
+ G K G+ ++V L E + A
Sbjct: 447 FTALIDGH-CKIGKAKDVCFLFENMVENRCLTTAH 480
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 15/260 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M K V + Y+ L+ R+G +++GVFR + LK G+ + + +L+ GY
Sbjct: 260 MATKACVPNVHTYTILIDRLCREGKIEEANGVFR--KMLKH---GLCPGIITFNALINGY 314
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
+G A + +V E + K + N +++ LC K +A L R+ + P
Sbjct: 315 CKEGWVVSAFQLL--SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLP 372
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
R+ ++N++ DG+C +G+ A +F M PD +F LID LCK G L +
Sbjct: 373 DRV-----TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 427
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A + G M KG++ DE T+ L+D ++ + D F MV++ +N +
Sbjct: 428 ANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLD 487
Query: 238 KLVQVGMLDEAKSFFDIMVK 257
L + L+EA + M+K
Sbjct: 488 ALGKDYKLNEANAMLGKMMK 507
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 38/268 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D V Y+ L+ GF ++G + F +F + G+ DG + +L+ G G E
Sbjct: 369 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS--AGLEPDGFTFTALIDGLCKLGRLE 426
Query: 65 EAMECYNEAVGE--NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK----------- 111
+A N +G + + V +++D C GK + LF+ M
Sbjct: 427 QA----NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTF 482
Query: 112 -------------NEHNP------PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
NE N L ++ + ++ +G+C G ++++ +M +
Sbjct: 483 NCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ 542
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
CSP+ ++ +I+ LC NG + EAE + MS GV+P+ +TY +L+ A + R+D
Sbjct: 543 AGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDR 602
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLV 240
MV +G +PN +Y+ L+ V
Sbjct: 603 AFQIVSTMVKNGCQPNSHIYSALLSGFV 630
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 141/367 (38%), Gaps = 52/367 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK--LGGVVSDGVVYGSLMKGYF 58
M KG D V ++ L+ G + G + V LFE + E L + +L K Y
Sbjct: 435 MVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY- 493
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
K E AM G SV V + +++ C G+ +LK+ +RMK P
Sbjct: 494 -KLNEANAMLGKMMKYGLVPSV----VTHTILIEGHCRAGETALSLKMLERMKQAGCSP- 547
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N+ ++ ++ +G C GR ++A + M + SP+ ++ L+ K G L A
Sbjct: 548 ----NVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRA 603
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA------------------------ 214
++ M G P+ + Y L+ F ++ GA
Sbjct: 604 FQIVSTMVKNGCQPNSHIYSALLSG-FVLSNTAIGARALSSTGDLDARSLSSEENDNNCL 662
Query: 215 --TYFRKM-VDSGLR----------PNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
FR M VD L+ P +YN LV L + G + EA MVK
Sbjct: 663 SSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLF 722
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
D + +++ K D LE + +LD+ + + G L EGR +E KL
Sbjct: 723 PDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHG-LRNEGRVQEAQKL 781
Query: 322 MEKKERE 328
+ R
Sbjct: 782 VSDLVRH 788
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 131/332 (39%), Gaps = 57/332 (17%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V V ++ L+ G R G++ ++ E +K+ G + Y ++ G
Sbjct: 505 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ--AGCSPNVYTYTIIINGLCNN 562
Query: 61 GMEEEAMECYNEAVGENSSVKMSA--VANNS-----VLDALCNNGKFDEALKLFDRM-KN 112
G EEA E MS+ V+ N ++ A G+ D A ++ M KN
Sbjct: 563 GRVEEA---------ETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKN 613
Query: 113 EHNPPKRLAVNLGSFNVMADGYCGQGRFKD-------------------AIEVFRKMGE- 152
P + L S V+++ G + VFR M
Sbjct: 614 GCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVD 673
Query: 153 ---------YRCS-PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
+C P +N L+ LCK G + EA++L +M G+ PD+ ++
Sbjct: 674 HALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEH 733
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMD 262
C + + D+ + + ++D+ P+ A Y ++ L G + EA+ +V+ ++
Sbjct: 734 YC-KTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIE 792
Query: 263 D-----ASYKFMMKALSDGGKLDEILEIVGGI 289
+ S +F+MK D D+ L+++ I
Sbjct: 793 EEVEVTPSIEFLMKEEEDDP--DKCLKLIKAI 822
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 98/257 (38%), Gaps = 39/257 (15%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM---------------------------- 174
A V+R+M + + +++ LCKNG
Sbjct: 112 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 171
Query: 175 -------LAEAEELYGEMS-DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
L EA ++ +MS ++ P+ TY +L+ E R+++ ++MV+ G +
Sbjct: 172 ANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 231
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEI 285
P+ Y L+ +GM D+A D M K + + +Y ++ L GK++E +
Sbjct: 232 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 291
Query: 286 VGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREA-EAAEAAK 344
+L G + G KEG +L+ E+ + R E E
Sbjct: 292 FRKMLKHGLCPGIITFNALING-YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 350
Query: 345 RSARAAIASLIPSKFGD 361
R +++ A L+ + D
Sbjct: 351 RVSKSYKAFLLLRRVVD 367
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 37/312 (11%)
Query: 8 ADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
DP V YS ++ G+ + F LF ++ L G ++ + L+KG FM+G E
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMF--LRGCDANIHTFTPLIKGCFMRGKLYE 332
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV--- 122
A++ + + + + + VA N+++ LC+NG +EAL++ D+M+ P
Sbjct: 333 ALDLWKLMIQD--GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSIL 390
Query: 123 ---------------------------NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
N+ ++ M D C F A + KM C
Sbjct: 391 IDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGC 450
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+P+T++FN I LC NG + A +L M G P+ TY L+DA F +N+ ++
Sbjct: 451 TPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFG 510
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALS 274
F+++ L+PNL YN ++ + GM+ EA F +V+ D +Y M+ A
Sbjct: 511 LFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYC 570
Query: 275 DGGKLDEILEIV 286
GK+ ++V
Sbjct: 571 KQGKVKIAAQLV 582
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 148/351 (42%), Gaps = 51/351 (14%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
+Y++L+ + + + L+ +K+ G++ + Y L+K + A + +
Sbjct: 146 IYNHLLDALLSENKFQMINPLYTNMKKD--GLIPNVFTYNILLKALCKNDRVDAAHKLFV 203
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E N AV +++ +LC GK D+A +L R K ++ +N +
Sbjct: 204 EM--SNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKP----------SVPVYNALI 251
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
DG C +GR + AI++ +M + P+ +S++ +I+ LC +G + A L+ +M +G +
Sbjct: 252 DGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCD 311
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
+ +T+ L+ CF ++ + ++ M+ G PN+ YN L+ L G L+EA
Sbjct: 312 ANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV 371
Query: 252 FDIMVKK------------------------------------LKMDDASYKFMMKALSD 275
D M + + + +Y M+ L
Sbjct: 372 CDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCK 431
Query: 276 GGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
D+ +V + +G + F+KG L GR E +KL+E+ +
Sbjct: 432 NSMFDQANSLVEKMTLEGCTPNTMTFNTFIKG-LCGNGRVEWAMKLLERMQ 481
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 19/256 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y+ ++ ++ D L E K L G + + + + +KG
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVE--KMTLEGCTPNTMTFNTFIKGLCGN 467
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E AM+ G ++ N +LDAL K++EA LF ++ + L
Sbjct: 468 GRVEWAMKLLERMQGHGCLPNITTY--NELLDALFRMNKYEEAFGLFQEIE-----ARNL 520
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL ++N + G+ G +A+++F K +PD++++N +I CK G + A +
Sbjct: 521 QPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQ 580
Query: 181 LYGEMSD-KGVNPDEYTY-GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV-- 236
L +S K +PD TY L+ AC +N +++ + K ++ G+ PN A +N LV
Sbjct: 581 LVERVSSMKEWHPDIITYTSLIWGACNWMN-IEEAMAFLDKAINQGICPNFATWNALVRC 639
Query: 237 -----GKLVQVGMLDE 247
G + + +LD+
Sbjct: 640 FFDSLGHMGPIHILDD 655
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F + +GY G + A+++F ++GE+ C P +N+L+D L LY M
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G+ P+ +TY +L+ A + +RVD F +M + G P+ Y +V L + G +D
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231
Query: 247 EAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+A+ + + K Y ++ + G+++ ++++G ++D+G
Sbjct: 232 DARE----LAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 139/300 (46%), Gaps = 18/300 (6%)
Query: 37 KEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCN 96
K K G+V Y L++G+ A + ++E + N V + +A N++LDALC
Sbjct: 198 KAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDL--LAYNALLDALCK 255
Query: 97 NGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
+G D K+F M N P + SF + YC G A +V +M Y
Sbjct: 256 SGDVDGGYKMFQEMGNLGLKP-----DAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLV 310
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM----DACFEVNRVDD 212
P+ +FN++I LCKN + +A L EM KG NPD +TY +M D C EVNR
Sbjct: 311 PNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHC-EVNR--- 366
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMK 271
+M + P+ YN ++ L+++G D A ++ M +K A+Y M+
Sbjct: 367 ATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIH 426
Query: 272 AL-SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKA 330
L GKL+E ++D+G +S + E ++ L G+ + V L K ER +
Sbjct: 427 GLVRKKGKLEEACRYFEMMIDEGIPPYSTTV-EMLRNRLVGWGQMDVVDVLAGKMERSSS 485
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 106/247 (42%), Gaps = 10/247 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + V D + Y+ L+ + GD DG +++F+E+ G+ D + + Y
Sbjct: 234 MLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNL--GLKPDAYSFAIFIHAYCDA 291
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A + + + + + N ++ LC N K D+A L D M + P
Sbjct: 292 GDVHSAYKVLDRM--KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANP--- 346
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++N + +C A ++ +M +C PD ++N ++ L + G A E
Sbjct: 347 --DTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATE 404
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVN-RVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
++ MS++ P TY +++ ++++ YF M+D G+ P L +L
Sbjct: 405 IWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRL 464
Query: 240 VQVGMLD 246
V G +D
Sbjct: 465 VGWGQMD 471
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 1/161 (0%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F ++ Y +A F +M E+ P + L+ LC + A+E +G+
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK 200
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G+ P TY +L+ + F +M++ +L YN L+ L + G +D
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVD 260
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
F M LK D S+ + A D G + +++
Sbjct: 261 GGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 129/258 (50%), Gaps = 19/258 (7%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ +AV +S++D C + + A +F M + + N+ S+N+M +G+C
Sbjct: 166 INPNAVTYSSLMDGYCLVNEVNNAKGIFSTMS-----LRGVTANVWSYNIMINGFCKIKM 220
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+A+ +F +M + PD +++N+LI+ LCK+G ++ A +L EM D+G PD TY
Sbjct: 221 TDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSS 280
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKK 258
L+DA + ++VD + + D G+RPN+ Y L+ L + G L++A + F D++VK
Sbjct: 281 LLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 340
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
+ +Y M+ + G DE L ++ + D+ + + ++
Sbjct: 341 YNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRS----------- 389
Query: 319 VKLMEKKEREKAEAKARE 336
L + E +KAE RE
Sbjct: 390 --LFDNDENDKAENLLRE 405
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V YS LM G+ + + +F + L GV ++ Y ++ G+
Sbjct: 161 MMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMS--LRGVTANVWSYNIMINGFCKI 218
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M +EAM + E + V NS+++ LC +GK ALKL D M + PP
Sbjct: 219 KMTDEAMNLFEEM--HCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPP--- 273
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + D C + AI + + + + P+ ++ LID LCK G L +A
Sbjct: 274 --DIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHN 331
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ ++ KG N TY +++ D+ KM D+ PN Y ++ L
Sbjct: 332 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLF 391
Query: 241 QVGMLDEAKSFFDIMVKK 258
D+A++ M+ +
Sbjct: 392 DNDENDKAENLLREMITR 409
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 13/227 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G A+ Y+ ++ GF + +D LFEE+ + ++ D V Y SL+ G
Sbjct: 196 MSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCR--KLIPDVVTYNSLINGLCKS 253
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A++ +E + + +S+LDALC N + D+A+ L +K++ P
Sbjct: 254 GKISYALKLVDEM--HDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRP--- 308
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N+ ++ ++ DG C GR +DA +F + Y + +T + +I C G+ EA
Sbjct: 309 --NMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTV--MIHGFCNKGLFDEA 364
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
L +M D P+ TY +++ + F+ + D R+M+ GL
Sbjct: 365 LALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLREMITRGL 411
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
+G K+A V M + +P+ +++++L+D C + A+ ++ MS +GV + ++
Sbjct: 148 EGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWS 207
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
Y ++++ ++ D+ F +M L P++ YN L+ L + G + A D M
Sbjct: 208 YNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMH 267
Query: 257 KKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
+ + D +Y ++ AL ++D+ + ++ L D GI + + L K GR
Sbjct: 268 DRGQPPDIITYSSLLDALCKNHQVDKAIALLKN-LKDQGIRPNMYTYTILIDGLCKGGRL 326
Query: 316 EEVVKLME 323
E+ + E
Sbjct: 327 EDAHNIFE 334
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 16/335 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D V + L+L R D FR+FE++ ++ + V Y L+ G G E
Sbjct: 201 GFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKE-ENCRPNSVTYSILIHGLCEAGRLE 259
Query: 65 EAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA + E V G S + V ++ A C+ G D+A+K+ D M + P
Sbjct: 260 EAFQLKQEMVEKGCQPSTRTYTV----LIKAKCDIGMTDKAMKMLDEMATKACVP----- 310
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ ++ ++ D C +G+ ++A VFRKM ++ P ++FN LI+ CK G + A +L
Sbjct: 311 NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLL 370
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M P+ TY LM+ V++ R++VD+GL P+ YN LV +
Sbjct: 371 SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKE 430
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE-E 300
G L+ A + F+ M L+ D ++ ++ L G+L++ I+G ++ GI E
Sbjct: 431 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK-GISLDEVT 489
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
+ G K G+ ++V L E + A
Sbjct: 490 FTALIDGH-CKIGKAKDVCFLFENMVENRCLTTAH 523
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 15/260 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M K V + Y+ L+ R+G +++GVFR + LK G+ + + +L+ GY
Sbjct: 303 MATKACVPNVHTYTILIDRLCREGKIEEANGVFR--KMLKH---GLCPGIITFNALINGY 357
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
+G A + +V E + K + N +++ LC K +A L R+ + P
Sbjct: 358 CKEGWVVSAFQLL--SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLP 415
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
R+ ++N++ DG+C +G+ A +F M PD +F LID LCK G L +
Sbjct: 416 DRV-----TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 470
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A + G M KG++ DE T+ L+D ++ + D F MV++ +N +
Sbjct: 471 ANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLD 530
Query: 238 KLVQVGMLDEAKSFFDIMVK 257
L + L+EA + M+K
Sbjct: 531 ALGKDYKLNEANAMLGKMMK 550
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 38/268 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D V Y+ L+ GF ++G + F +F + G+ DG + +L+ G G E
Sbjct: 412 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS--AGLEPDGFTFTALIDGLCKLGRLE 469
Query: 65 EAMECYNEAVGE--NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK----------- 111
+A N +G + + V +++D C GK + LF+ M
Sbjct: 470 QA----NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTF 525
Query: 112 -------------NEHNP------PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
NE N L ++ + ++ +G+C G ++++ +M +
Sbjct: 526 NCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ 585
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
CSP+ ++ +I+ LC NG + EAE + MS GV+P+ +TY +L+ A + R+D
Sbjct: 586 AGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDR 645
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLV 240
MV +G +PN +Y+ L+ V
Sbjct: 646 AFQIVSTMVKNGCQPNSHIYSALLSGFV 673
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 141/367 (38%), Gaps = 52/367 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK--LGGVVSDGVVYGSLMKGYF 58
M KG D V ++ L+ G + G + V LFE + E L + +L K Y
Sbjct: 478 MVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY- 536
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
K E AM G SV V + +++ C G+ +LK+ +RMK P
Sbjct: 537 -KLNEANAMLGKMMKYGLVPSV----VTHTILIEGHCRAGETALSLKMLERMKQAGCSP- 590
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N+ ++ ++ +G C GR ++A + M + SP+ ++ L+ K G L A
Sbjct: 591 ----NVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRA 646
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA------------------------ 214
++ M G P+ + Y L+ F ++ GA
Sbjct: 647 FQIVSTMVKNGCQPNSHIYSALLSG-FVLSNTAIGARALSSTGDLDARSLSSEENDNNCL 705
Query: 215 --TYFRKM-VDSGLR----------PNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
FR M VD L+ P +YN LV L + G + EA MVK
Sbjct: 706 SSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLF 765
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
D + +++ K D LE + +LD+ + + G L EGR +E KL
Sbjct: 766 PDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHG-LRNEGRVQEAQKL 824
Query: 322 MEKKERE 328
+ R
Sbjct: 825 VSDLVRH 831
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 131/332 (39%), Gaps = 57/332 (17%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V V ++ L+ G R G++ ++ E +K+ G + Y ++ G
Sbjct: 548 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ--AGCSPNVYTYTIIINGLCNN 605
Query: 61 GMEEEAMECYNEAVGENSSVKMSA--VANNS-----VLDALCNNGKFDEALKLFDRM-KN 112
G EEA E MS+ V+ N ++ A G+ D A ++ M KN
Sbjct: 606 GRVEEA---------ETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKN 656
Query: 113 EHNPPKRLAVNLGSFNVMADGYCGQGRFKD-------------------AIEVFRKMGE- 152
P + L S V+++ G + VFR M
Sbjct: 657 GCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVD 716
Query: 153 ---------YRCS-PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
+C P +N L+ LCK G + EA++L +M G+ PD+ ++
Sbjct: 717 HALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEH 776
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMD 262
C + + D+ + + ++D+ P+ A Y ++ L G + EA+ +V+ ++
Sbjct: 777 YC-KTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIE 835
Query: 263 D-----ASYKFMMKALSDGGKLDEILEIVGGI 289
+ S +F+MK D D+ L+++ I
Sbjct: 836 EEVEVTPSIEFLMKEEEDDP--DKCLKLIKAI 865
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 98/257 (38%), Gaps = 39/257 (15%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM---------------------------- 174
A V+R+M + + +++ LCKNG
Sbjct: 155 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 214
Query: 175 -------LAEAEELYGEMS-DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
L EA ++ +MS ++ P+ TY +L+ E R+++ ++MV+ G +
Sbjct: 215 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 274
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEI 285
P+ Y L+ +GM D+A D M K + + +Y ++ L GK++E +
Sbjct: 275 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 334
Query: 286 VGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREA-EAAEAAK 344
+L G + G KEG +L+ E+ + R E E
Sbjct: 335 FRKMLKHGLCPGIITFNALING-YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 393
Query: 345 RSARAAIASLIPSKFGD 361
R +++ A L+ + D
Sbjct: 394 RVSKSYKAFLLLRRVVD 410
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 16/335 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D V + L+L R D FR+FE++ ++ + V Y L+ G G E
Sbjct: 224 GFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKE-ENCRPNSVTYSILIHGLCEAGRLE 282
Query: 65 EAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA + E V G S + V ++ A C+ G D+A+K+ D M + P
Sbjct: 283 EAFQLKQEMVEKGCQPSTRTYTV----LIKAKCDIGMTDKAMKMLDEMATKACVP----- 333
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ ++ ++ D C +G+ ++A VFRKM ++ P ++FN LI+ CK G + A +L
Sbjct: 334 NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLL 393
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M P+ TY LM+ V++ R++VD+GL P+ YN LV +
Sbjct: 394 SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKE 453
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE-E 300
G L+ A + F+ M L+ D ++ ++ L G+L++ I+G ++ GI E
Sbjct: 454 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK-GISLDEVT 512
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
+ G K G+ ++V L E + A
Sbjct: 513 FTALIDGH-CKIGKAKDVCFLFENMVENRCLTTAH 546
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 15/260 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M K V + Y+ L+ R+G +++GVFR + LK G+ + + +L+ GY
Sbjct: 326 MATKACVPNVHTYTILIDRLCREGKIEEANGVFR--KMLKH---GLCPGIITFNALINGY 380
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
+G A + +V E + K + N +++ LC K +A L R+ + P
Sbjct: 381 CKEGWVVSAFQLL--SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLP 438
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
R+ ++N++ DG+C +G+ A +F M PD +F LID LCK G L +
Sbjct: 439 DRV-----TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 493
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A + G M KG++ DE T+ L+D ++ + D F MV++ +N +
Sbjct: 494 ANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLD 553
Query: 238 KLVQVGMLDEAKSFFDIMVK 257
L + L+EA + M+K
Sbjct: 554 ALGKDYKLNEANAMLGKMMK 573
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 38/268 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D V Y+ L+ GF ++G + F +F + G+ DG + +L+ G G E
Sbjct: 435 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS--AGLEPDGFTFTALIDGLCKLGRLE 492
Query: 65 EAMECYNEAVGE--NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK----------- 111
+A N +G + + V +++D C GK + LF+ M
Sbjct: 493 QA----NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTF 548
Query: 112 -------------NEHNP------PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
NE N L ++ + ++ +G+C G ++++ +M +
Sbjct: 549 NCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ 608
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
CSP+ ++ +I+ LC NG + EAE + MS GV+P+ +TY +L+ A + R+D
Sbjct: 609 AGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDR 668
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLV 240
MV +G +PN +Y+ L+ V
Sbjct: 669 AFQIVSTMVKNGCQPNSHIYSALLSGFV 696
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 151/388 (38%), Gaps = 75/388 (19%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK--LGGVVSDGVVYGSLMKGYF 58
M KG D V ++ L+ G + G + V LFE + E L + +L K Y
Sbjct: 501 MVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY- 559
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
K E AM G SV V + +++ C G+ +LK+ +RMK P
Sbjct: 560 -KLNEANAMLGKMMKYGLVPSV----VTHTILIEGHCRAGETALSLKMLERMKQAGCSP- 613
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N+ ++ ++ +G C GR ++A + M + SP+ ++ L+ K G L A
Sbjct: 614 ----NVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRA 669
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR------------ 226
++ M G P+ + Y L+ F ++ GA D R
Sbjct: 670 FQIVSTMVKNGCQPNSHIYSALLSG-FVLSNTAIGARALSSTGDLDARSLSSEENDNNCL 728
Query: 227 ---------PNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-------------------- 257
P +YN LV L + G + EA MVK
Sbjct: 729 SNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHYCKTC 788
Query: 258 ---------KLKMDD------ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
KL +D+ ASY +++ L + G++ E ++V ++ GIE E+
Sbjct: 789 KYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVT 848
Query: 303 ---EFVKGELSKEGREEEVVKLMEKKER 327
EF+ E +E ++ +KL++ E+
Sbjct: 849 PSIEFLMKE--EEDDPDKCLKLIKAIEQ 874
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 98/257 (38%), Gaps = 39/257 (15%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM---------------------------- 174
A V+R+M + + +++ LCKNG
Sbjct: 178 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 237
Query: 175 -------LAEAEELYGEMS-DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
L EA ++ +MS ++ P+ TY +L+ E R+++ ++MV+ G +
Sbjct: 238 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 297
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEI 285
P+ Y L+ +GM D+A D M K + + +Y ++ L GK++E +
Sbjct: 298 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 357
Query: 286 VGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREA-EAAEAAK 344
+L G + G KEG +L+ E+ + R E E
Sbjct: 358 FRKMLKHGLCPGIITFNALING-YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 416
Query: 345 RSARAAIASLIPSKFGD 361
R +++ A L+ + D
Sbjct: 417 RVSKSYKAFLLLRRVVD 433
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 150/321 (46%), Gaps = 22/321 (6%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P Y+Y +++G+ G D + L E K K G + + Y ++ K EEA+
Sbjct: 88 PCAYAYNTMIMGYGSAGKFDEAYGLLERQKAK--GSIPSVIAYNCILTCLGKKRRVEEAL 145
Query: 68 ECYNEAVGENSSVKMSAVAN----NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ E +K AV N N ++D LC GK + AL++ D M+ P L VN
Sbjct: 146 RIFEE-------MKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVN 198
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+M D C + ++A +F M + C+P+ ++F++LID L K G + +A LY
Sbjct: 199 -----IMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYE 253
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M D G P Y L+ + F+ R +DG +++MV +G P+L + N + + + G
Sbjct: 254 KMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAG 313
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++ ++ F +I D SY ++ L G +E E+ + + G + +
Sbjct: 314 ETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYN 373
Query: 303 EFVKGELSKEGREEEVVKLME 323
+ G K G+ + +L+E
Sbjct: 374 AVIDG-FCKSGKVNKAYQLLE 393
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 143/282 (50%), Gaps = 16/282 (5%)
Query: 7 VADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
V P V +S L+ G + G D + L+E++ + G V +VY SL++ +F G +E
Sbjct: 224 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLD--CGHVPGAIVYTSLIRSFFKCGRKE 281
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN--PPKRLAV 122
+ + Y E V S ++ + N+ +D + G+ ++ LF R N H P R
Sbjct: 282 DGHKIYKEMVHTGCSPDLTLI--NTYMDCVFKAGETEKGRALF-REINAHGFIPDAR--- 335
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
S++++ G G + E+F M E C DT ++N +ID CK+G + +A +L
Sbjct: 336 ---SYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL 392
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM KG P TYG ++D +++R+D+ F + +G++ N+ VY+ L+ +V
Sbjct: 393 EEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKV 452
Query: 243 GMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEIL 283
G +DEA ++M K L + ++ ++ AL +++E L
Sbjct: 453 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 494
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 132/282 (46%), Gaps = 22/282 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
GF+ D YS L+ G V+ G ++ + LF +KE+ G V D Y +++ G+ G
Sbjct: 328 HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ--GCVLDTHAYNAVIDGFCKSGKV 385
Query: 64 EEAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
+A + E G +V V SV+D L + DEA LF+ K+ +
Sbjct: 386 NKAYQLLEEMKVKGHPPTV----VTYGSVIDGLAKIDRLDEAYMLFEEAKSNG-----IK 436
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+N+ ++ + DG+ GR +A + ++ + +P+ ++N L+D L K + EA
Sbjct: 437 LNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALIC 496
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ M D P++ TY +L++ V + + ++++M GL+PN Y ++ L +
Sbjct: 497 FQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAK 556
Query: 242 VGMLDEAKSFFDIMVKKLKM-----DDASYKFMMKALSDGGK 278
G + EA F + K D ASY M++ LS K
Sbjct: 557 AGNILEASGLFS----RFKANGGIPDSASYNAMIEGLSSANK 594
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 10/231 (4%)
Query: 27 DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVA 86
D LFE+L++ V Y +++ GY G +EA + S S +A
Sbjct: 72 DEAVELFEQLEQNRK--VPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP--SVIA 127
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N +L L + +EAL++F+ MK + P N+ ++N++ D C +G+ A+E+
Sbjct: 128 YNCILTCLGKKRRVEEALRIFEEMKRDAVP------NVPTYNILIDMLCREGKLNAALEI 181
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
M P+ L+ N +ID+LCK L EA ++ M DK P+ T+ L+D +
Sbjct: 182 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 241
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
RVDD + + KM+D G P VY L+ + G ++ + MV
Sbjct: 242 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVH 292
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 137/290 (47%), Gaps = 11/290 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D Y+ ++ GF + G + ++L EE+K K G V YGS++ G
Sbjct: 363 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVK--GHPPTVVTYGSVIDGLAKIDRL 420
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + EA +++ +K++ V +S++D G+ DEA + + + K L N
Sbjct: 421 DEAYMLFEEA--KSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQ-----KGLTPN 473
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + D +A+ F+ M + +C P+ ++++ LI+ LC+ +A +
Sbjct: 474 VYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQ 533
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G+ P+ TY ++ + + + + F + +G P+ A YN ++ L
Sbjct: 534 EMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSAN 593
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
+A + F + +K + + ++ AL L++ IVG +L +
Sbjct: 594 KAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA-AIVGAVLKE 642
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 9/268 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG V Y ++ G + D + LFEE K G+ + VVY SL+ G+
Sbjct: 395 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS--NGIKLNVVVYSSLIDGFGKV 452
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA E + + + N +LDAL + +EAL F MK+ PP ++
Sbjct: 453 GRIDEAYLIMEELM--QKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQI 510
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++++ +G C +F A +++M + P+T+++ +I L K G + EA
Sbjct: 511 -----TYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASG 565
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ G PD +Y +++ N+ D F + G + L+ L
Sbjct: 566 LFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALH 625
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKF 268
+ L++A ++ + K AS F
Sbjct: 626 KAECLEQAAIVGAVLKETAKSQHASRSF 653
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 16/229 (6%)
Query: 94 LCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
LC + DEA++LF++++ P A +N M GY G+F +A + +
Sbjct: 65 LCKANRLDEAVELFEQLEQNRKVPCAYA-----YNTMIMGYGSAGKFDEAYGLLERQKAK 119
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
P +++N ++ L K + EA ++ EM V P+ TY +L+D +++
Sbjct: 120 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAA 178
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKA 272
M +GL PN+ N ++ +L + L+EA S F+ M K+ +A ++ ++
Sbjct: 179 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 238
Query: 273 LSDGGKLDEILEIVGGILD----DGGIEFSEELQEFVKGELSKEGREEE 317
L G++D+ + +LD G I ++ ++ F K GR+E+
Sbjct: 239 LGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKC-----GRKED 282
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ----------LCKNGMLAEAEELYGEMSDK 188
+ ++A ++ + M +++ P ++ LI + LCK L EA EL+ ++
Sbjct: 25 KLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQN 84
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
P Y Y ++ + D+ + G P++ YN ++ L + ++EA
Sbjct: 85 RKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEA 144
Query: 249 KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
F+ M + + +Y ++ L GKL+ LEI
Sbjct: 145 LRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEI 181
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 164/375 (43%), Gaps = 70/375 (18%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G++ + V Y+ L+ G + RLF + +KLG + V YG+L+KG G
Sbjct: 155 RGYIPNVVTYTTLIKGLCMEHRISEATRLFLRM-QKLG-CTPNAVTYGTLIKGLCQTGNV 212
Query: 64 EEAMECYNEAVGENS----SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
A++ + E + + S + K + + ++D LC G+ DEA +LF+ MK + P
Sbjct: 213 NIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDV 272
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ S++ + G+C G++ + +F +M + PD ++F+ LID LCK G + EA+
Sbjct: 273 I-----SYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAK 327
Query: 180 -----------------------------------ELYGEMSDKGVNPDEYTYGLLMDAC 204
EL+ M KG+ PDE +Y L++
Sbjct: 328 KLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGY 387
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDD 263
+ +V + + +M+ G PN+ Y L+ L Q G + +AK F +M + +
Sbjct: 388 CKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANS 447
Query: 264 ASYKFMMKALSDGGKLDEILE-------------------IVGGILDDGGIEFSEELQEF 304
Y + L L E +E ++ G+ G +E + EL E
Sbjct: 448 QIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFE- 506
Query: 305 VKGELSKEGREEEVV 319
+LS+EG + +VV
Sbjct: 507 ---KLSQEGLQPDVV 518
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V + + Y+ L+ GF GD + LF + K G+ D + Y +L+ GY
Sbjct: 333 MIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSK--GLEPDEISYTTLINGYCKT 390
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EAM YNE + S ++ ++L L GK +A KLF MK +
Sbjct: 391 WKVKEAMNLYNEMLQVGKSPNVTTYG--TLLKGLFQKGKVGDAKKLFGVMKTY-----GV 443
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ N + + DG C +A+E+F ++ Y + +++ LID LCK G L A E
Sbjct: 444 SANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWE 503
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ ++S +G+ PD TY +++ +V +VD+ F KM ++G P++ YN L+
Sbjct: 504 LFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFC 563
Query: 241 QVGMLDEAKSFFDIMVKK 258
+ L+E MV+K
Sbjct: 564 EGNKLEEVIKLLHKMVQK 581
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 160/340 (47%), Gaps = 21/340 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + D + YS L+ GF G D LF+E+ ++ GV D V + L+ +
Sbjct: 263 MKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQ--GVQPDMVTFSVLIDTLCKE 320
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + + + + + NS++D C G + A +LF M P K L
Sbjct: 321 GKVTEAKKLLEVMI--QRGIVPNLITYNSLIDGFCMVGDLNSARELFLSM-----PSKGL 373
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ S+ + +GYC + K+A+ ++ +M + SP+ ++ L+ L + G + +A++
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKK 433
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+G M GV+ + YG+ +D + + + + F ++ + N+ Y+ L+ L
Sbjct: 434 LFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLC 493
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG----- 294
+ G L+ A F+ + ++ L+ D +Y M+ G++D I+ +++ G
Sbjct: 494 KAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNA-NILFEKMEENGCTPDI 552
Query: 295 IEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKA 334
I ++ L F +G + EEV+KL+ K ++ A
Sbjct: 553 IAYNTLLCGFCEG-----NKLEEVIKLLHKMVQKDVSPNA 587
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 89/221 (40%), Gaps = 25/221 (11%)
Query: 114 HNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
H+P N + N+ A A F M P SFN L+ L K
Sbjct: 55 HHPLSLFLRNCKTGNITA---------IQAFHFFDLMMRSHPIPPISSFNRLLGGLAKIN 105
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
++ LY EM G++PD +T +L + VNRV + ++ G PN+ Y
Sbjct: 106 HYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYT 165
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDD 292
L+ L + EA F M K +A +Y ++K L G ++ L++ +L+D
Sbjct: 166 TLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLND 225
Query: 293 ----------GGIEFSEELQEFVKGELSKEGREEEVVKLME 323
G I +S + L K GRE+E +L E
Sbjct: 226 ASQYGVNCKPGVITYS-----IIIDGLCKVGREDEAKELFE 261
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 97/275 (35%), Gaps = 54/275 (19%)
Query: 95 CNNGKFD--EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
C G +A FD M H P + SFN + G + ++ +M
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPP-----ISSFNRLLGGLAKINHYSQLFSLYNEMRL 119
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
SPD + + L + LC ++EA + +G P+ TY L+ +R+ +
Sbjct: 120 AGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISE 179
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVG-----------ML---------------- 245
F +M G PN Y L+ L Q G ML
Sbjct: 180 ATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVIT 239
Query: 246 --------------DEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
DEAK F+ M + + D SY ++ GK D+ + ++
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299
Query: 291 DDGGIEFSEELQEF--VKGELSKEGREEEVVKLME 323
D G ++ F + L KEG+ E KL+E
Sbjct: 300 DQG---VQPDMVTFSVLIDTLCKEGKVTEAKKLLE 331
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 150/321 (46%), Gaps = 22/321 (6%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P Y+Y +++G+ G D + L E K K G + + Y ++ K EEA+
Sbjct: 333 PCAYAYNTMIMGYGSAGKFDEAYGLLERQKAK--GSIPSVIAYNCILTCLGKKRRVEEAL 390
Query: 68 ECYNEAVGENSSVKMSAVAN----NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ E +K AV N N ++D LC GK + AL++ D M+ P L VN
Sbjct: 391 RIFEE-------MKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVN 443
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+M D C + ++A +F M + C+P+ ++F++LID L K G + +A LY
Sbjct: 444 -----IMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYE 498
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M D G P Y L+ + F+ R +DG +++MV +G P+L + N + + + G
Sbjct: 499 KMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAG 558
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++ ++ F +I D SY ++ L G +E E+ + + G + +
Sbjct: 559 ETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYN 618
Query: 303 EFVKGELSKEGREEEVVKLME 323
+ G K G+ + +L+E
Sbjct: 619 AVIDG-FCKSGKVNKAYQLLE 638
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 143/282 (50%), Gaps = 16/282 (5%)
Query: 7 VADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
V P V +S L+ G + G D + L+E++ + G V +VY SL++ +F G +E
Sbjct: 469 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLD--CGHVPGAIVYTSLIRSFFKCGRKE 526
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN--PPKRLAV 122
+ + Y E V S ++ + N+ +D + G+ ++ LF R N H P R
Sbjct: 527 DGHKIYKEMVHTGCSPDLTLI--NTYMDCVFKAGETEKGRALF-REINAHGFIPDAR--- 580
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
S++++ G G + E+F M E C DT ++N +ID CK+G + +A +L
Sbjct: 581 ---SYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL 637
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM KG P TYG ++D +++R+D+ F + +G++ N+ VY+ L+ +V
Sbjct: 638 EEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKV 697
Query: 243 GMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEIL 283
G +DEA ++M K L + ++ ++ AL +++E L
Sbjct: 698 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 739
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 10/254 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G + D V Y+ ++ + D LFE+L++ V Y +++ GY G
Sbjct: 294 HGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRK--VPCAYAYNTMIMGYGSAGKF 351
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + S S +A N +L L + +EAL++F+ MK + P N
Sbjct: 352 DEAYGLLERQKAKGSIP--SVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP------N 403
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N++ D C +G+ A+E+ M P+ L+ N +ID+LCK L EA ++
Sbjct: 404 VPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFE 463
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M DK P+ T+ L+D + RVDD + + KM+D G P VY L+ + G
Sbjct: 464 GMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCG 523
Query: 244 MLDEAKSFFDIMVK 257
++ + MV
Sbjct: 524 RKEDGHKIYKEMVH 537
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 132/282 (46%), Gaps = 22/282 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
GF+ D YS L+ G V+ G ++ + LF +KE+ G V D Y +++ G+ G
Sbjct: 573 HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ--GCVLDTHAYNAVIDGFCKSGKV 630
Query: 64 EEAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
+A + E G +V V SV+D L + DEA LF+ K+ +
Sbjct: 631 NKAYQLLEEMKVKGHPPTV----VTYGSVIDGLAKIDRLDEAYMLFEEAKSNG-----IK 681
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+N+ ++ + DG+ GR +A + ++ + +P+ ++N L+D L K + EA
Sbjct: 682 LNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALIC 741
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ M D P++ TY +L++ V + + ++++M GL+PN Y ++ L +
Sbjct: 742 FQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAK 801
Query: 242 VGMLDEAKSFFDIMVKKLKM-----DDASYKFMMKALSDGGK 278
G + EA F + K D ASY M++ LS K
Sbjct: 802 AGNILEASGLFS----RFKANGGIPDSASYNAMIEGLSSANK 839
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 137/290 (47%), Gaps = 11/290 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D Y+ ++ GF + G + ++L EE+K K G V YGS++ G
Sbjct: 608 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVK--GHPPTVVTYGSVIDGLAKIDRL 665
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + EA +++ +K++ V +S++D G+ DEA + + + K L N
Sbjct: 666 DEAYMLFEEA--KSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQ-----KGLTPN 718
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + D +A+ F+ M + +C P+ ++++ LI+ LC+ +A +
Sbjct: 719 VYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQ 778
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G+ P+ TY ++ + + + + F + +G P+ A YN ++ L
Sbjct: 779 EMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSAN 838
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
+A + F + +K + + ++ AL L++ IVG +L +
Sbjct: 839 KAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA-AIVGAVLKE 887
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 9/268 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG V Y ++ G + D + LFEE K G+ + VVY SL+ G+
Sbjct: 640 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS--NGIKLNVVVYSSLIDGFGKV 697
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA E + + + N +LDAL + +EAL F MK+ PP ++
Sbjct: 698 GRIDEAYLIMEELM--QKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQI 755
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++++ +G C +F A +++M + P+T+++ +I L K G + EA
Sbjct: 756 -----TYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASG 810
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ G PD +Y +++ N+ D F + G + L+ L
Sbjct: 811 LFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALH 870
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKF 268
+ L++A ++ + K AS F
Sbjct: 871 KAECLEQAAIVGAVLKETAKSQHASRSF 898
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 5/198 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ G+ D AL L D MK+ L ++ +NV D + G+ + + F
Sbjct: 234 TTLIRVFAREGRVDAALSLLDEMKSN-----SLDADIVLYNVCIDCFGKAGKVDMSWKFF 288
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M + PD +++ ++I LCK L EA EL+ ++ P Y Y ++
Sbjct: 289 HEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSA 348
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
+ D+ + G P++ YN ++ L + ++EA F+ M + + +Y
Sbjct: 349 GKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYN 408
Query: 268 FMMKALSDGGKLDEILEI 285
++ L GKL+ LEI
Sbjct: 409 ILIDMLCREGKLNAALEI 426
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 10/280 (3%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
V P Y+ L++ R+ + D + R+ EE+ L G + L+ EA
Sbjct: 122 VHCPEAYNSLLMVMARNTEFDHLERILEEMS--LSGFGPSSNISIELVANCVKSRKLREA 179
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ + + A ++ AL + D L LF +M+ VN+
Sbjct: 180 FDIIQTM--RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQE-----LGYEVNVHL 232
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F + + +GR A+ + +M D + +N ID K G + + + + EM
Sbjct: 233 FTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMK 292
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G+ PD+ TY ++ + NR+D+ F ++ + P YN ++ G D
Sbjct: 293 SHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFD 352
Query: 247 EAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEI 285
EA + K + +Y ++ L +++E L I
Sbjct: 353 EAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRI 392
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 134/280 (47%), Gaps = 10/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ ++ + D + ++ +K GV+ D Y SL+ GY
Sbjct: 242 MVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDK--GVLPDNWTYNSLIYGYSST 299
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + + + V NS++ +LC +GK +A +FD M K
Sbjct: 300 GQWKEAVRVSKKMTSQG--ILPDVVTLNSLMASLCKHGKIKDARDVFDSMAM-----KGQ 352
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+ +M +GY +G D E+F M +PD+ FN LI K GML A
Sbjct: 353 KTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATI 412
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM ++GV PD TY ++ A + ++DD F +M+D G+ P+++ Y+ L+
Sbjct: 413 IFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFC 472
Query: 241 QVGMLDEAKSF-FDIMVKKLKMDDASYKFMMKALSDGGKL 279
G L +AK +M K ++ D + F++ L G++
Sbjct: 473 THGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRV 512
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 147/295 (49%), Gaps = 18/295 (6%)
Query: 5 GFVADPVVYSYLMLGFVRD---GDSDGVFRLFEELKEKLGGVVS--DGVVYGSLMKGYFM 59
G V D Y ++ D G +D + R+ E GG V + V Y +++ G+F
Sbjct: 174 GCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE-----GGAVCLPNAVAYNTVIDGFFK 228
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+G +A + +NE V S +S N V++ALC D+A + +M ++ P
Sbjct: 229 EGDVNKACDLFNEMVQRGISPDLSTY--NCVVNALCKARAMDKAEAILRQMVDKGVLPDN 286
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++N + GY G++K+A+ V +KM PD ++ N+L+ LCK+G + +A
Sbjct: 287 W-----TYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDAR 341
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+++ M+ KG D ++Y ++++ + D F M+ G+ P+ ++N L+
Sbjct: 342 DVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAY 401
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ GMLD A F+ M ++ ++ D +Y ++ AL GK+D+ +E ++D G
Sbjct: 402 AKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D +++ L+ + + G D +F E++E+ GV D V Y +++
Sbjct: 382 MLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQ--GVEPDVVTYSTVIAALCRI 439
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+E +N+ + + + +S + ++ C +G +A L +M N+ P
Sbjct: 440 GKMDDAVEKFNQMIDQGVAPSISTY--HFLIQGFCTHGDLLKAKDLVLQMMNKGMRP--- 494
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++G FN + + C GR DA +F P+ + +N L+D C G + A
Sbjct: 495 --DIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALR 552
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M G+ P+ YG L++ +V R+D+G + FR+++ G++P+ +YN ++ L
Sbjct: 553 VFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLF 612
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
Q G AK F M + + MD +Y ++ L DE
Sbjct: 613 QAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDE 654
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 16/224 (7%)
Query: 106 LFDRMKNEHNPPKRLA-------VNLGSFNVMAD----GYCGQGRFKDAIEVF-RKMGEY 153
L D H P LA LG +M G C R +A+++ +M
Sbjct: 114 LMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHL 173
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG--VNPDEYTYGLLMDACFEVNRVD 211
C PD S+ ++ LC + +A+EL M++ G P+ Y ++D F+ V+
Sbjct: 174 GCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVN 233
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
F +MV G+ P+L+ YN +V L + +D+A++ MV K + D+ +Y ++
Sbjct: 234 KACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLI 293
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
S G+ E + + + G + L + L K G+
Sbjct: 294 YGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLM-ASLCKHGK 336
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 6/230 (2%)
Query: 103 ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
A+ LF+R+ H P + L+ L ++ ++ D R K + F ++ + DT+
Sbjct: 88 AVALFNRVSRAHGP-RVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMI 146
Query: 163 NNLIDQLCKNGMLAEAEE-LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+NL+ LC+ AEA + L M G PD ++Y +++ + + R M
Sbjct: 147 SNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMA 206
Query: 222 DSG--LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
+ G PN YN ++ + G +++A F+ MV++ + D ++Y ++ AL
Sbjct: 207 EGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARA 266
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
+D+ I+ ++D G + + + G S G+ +E V++ +K +
Sbjct: 267 MDKAEAILRQMVDKGVLPDNWTYNSLIYG-YSSTGQWKEAVRVSKKMTSQ 315
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 77/158 (48%), Gaps = 20/158 (12%)
Query: 170 CKNGMLAEAEELYGEMS----DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
C++G A A L+ +S + ++P +TYG+LMD C +R +F +++ +GL
Sbjct: 81 CRDGP-ALAVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGL 139
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM-----DDASYKFMMKALSD---GG 277
+ + + L+ L + EA DI++ ++ D SY ++K+L G
Sbjct: 140 GIDTIMISNLLRGLCEAKRTAEA---LDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSG 196
Query: 278 KLDEILEIV---GGILDDGGIEFSEELQEFVK-GELSK 311
+ DE+L ++ G + + ++ + F K G+++K
Sbjct: 197 QADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNK 234
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + G+ V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WGLRPSVVSFNTLMNGYIKLGNLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A +LFD M + P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVVT 418
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 111/251 (44%), Gaps = 8/251 (3%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
+F + E G +SD V+ L+ Y G +A+ECY + + ++ VL
Sbjct: 51 VFAAILETKGTQISDIYVFSGLITAYLESGFLRDAIECYR--LTKEHKFRVPFDTCRKVL 108
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ L F ++ P +L FN++ + +G + A VF +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYP-----ASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
++ P +SFN L++ K G L E L M GV PD YTY +L++ + +++D
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
D F +M+D+GL PN + L+ + G +D A + M+ + L D +Y ++
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 271 KALSDGGKLDE 281
L G L +
Sbjct: 284 YGLCKKGDLKQ 294
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 101/252 (40%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +LM + + + + F + GLRP++ +N L+ +++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE + M ++ D +Y ++ L K+D+ E+ +LD+G +
Sbjct: 186 NLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 141/294 (47%), Gaps = 16/294 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ ++ G + D +F+++ +K GV D Y L+ GY
Sbjct: 229 MMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK--GVKPDNDTYNCLIHGYLSI 286
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +E + E +K S+L+ LCNNG+ EA FD M + P
Sbjct: 287 GKWKEVVRMLEEMSAH--GLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKP--- 341
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ + ++ GY +G + ++ M E SPD FN + K M+ EA
Sbjct: 342 --NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M +G++PD +G L+DA ++ RVDD F +M++ G+ PN+ V+N LV L
Sbjct: 400 IFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459
Query: 241 QVGMLDEAKSF-FDIMVKKLKMDDASYKFMMKALSDGG------KLDEILEIVG 287
V ++AK F F+++ + ++ D + ++ L G +L +++E VG
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVG 513
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 145/324 (44%), Gaps = 11/324 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + +Y L+ G+ G + L + E G+ D ++ + Y K
Sbjct: 334 MIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN--GLSPDHHIFNIIFTAYAKK 391
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M +EAM +N+ + + V +++DALC G+ D+A+ F++M NE P
Sbjct: 392 AMIDEAMHIFNKM--KQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAP--- 446
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ FN + G C +++ A E + +M PD + FN ++ LC G + +A+
Sbjct: 447 --NIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G PD +Y L+ V R+D+ A M+ GL+P+ YN L+
Sbjct: 505 LIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G +D+A F M++ + +Y ++ L + E E+ ++ G +++
Sbjct: 565 RAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK-QWNI 623
Query: 300 ELQEFVKGELSKEGREEEVVKLME 323
+ + LSK +E KL +
Sbjct: 624 WIYNIILNGLSKNNCVDEAFKLFQ 647
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 151/324 (46%), Gaps = 13/324 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D YS L+ F R G + F F + + G + +V L+KG EAM+
Sbjct: 93 DLCTYSILIGCFCRMGRLEHGFATFGLILK--SGWRVNNIVINQLLKGLCDAKRLREAMD 150
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN---PPKRLAVNLG 125
+ + E V+ N++L CN + +EAL+L M + PP N+
Sbjct: 151 ILIKRMPELGCTP-DVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP-----NVV 204
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
S+ + +G+ +G+ A +F +M + P+ +++ +ID LCK ++ AE ++ +M
Sbjct: 205 SYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQM 264
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
DKGV PD TY L+ + + + +M GL+P+ Y L+ L G
Sbjct: 265 IDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRC 324
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
EA+ FFD M++K +K + A Y ++ + G L E+ +++ ++ + G+ +
Sbjct: 325 REARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL-NLMVENGLSPDHHIFNI 383
Query: 305 VKGELSKEGREEEVVKLMEKKERE 328
+ +K+ +E + + K +++
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQ 407
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 147/339 (43%), Gaps = 15/339 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V + L+ + G D F ++ + GV + V+ SL+ G
Sbjct: 407 QGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNE--GVAPNIFVFNSLVYGLCTVDKW 464
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A E Y E + N ++ V N++L LC G+ +A +L D M+ P +
Sbjct: 465 EKAKEFYFEML--NQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP-----D 517
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S+ + G+C GR +A + M PD ++N L+ C+ G + +A ++
Sbjct: 518 VISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFR 577
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G+ P TY ++ F R + + M+ SG + N+ +YN ++ L +
Sbjct: 578 EMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNN 637
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE--FSEE 300
+DEA F + K +++ ++ M+ AL G+ ++ + + I G + F+
Sbjct: 638 CVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYC 697
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
L + L +EG EE L E+ +R A
Sbjct: 698 L---IAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNA 733
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 99/267 (37%), Gaps = 80/267 (29%)
Query: 100 FDEALKLFDRMKNEHNPPKRLAVN------------------------------------ 123
D+ALKLFD + P +A N
Sbjct: 30 LDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89
Query: 124 ----LGSFNVMADGYCGQGRFKDAIEVF-------------------------------- 147
L +++++ +C GR + F
Sbjct: 90 VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149
Query: 148 ----RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD---KGVNPDEYTYGLL 200
++M E C+PD +S+N L+ C EA EL M+D + P+ +Y +
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-L 259
++ F +VD F +M+D G++PN+ Y ++ L + ++D A+ F M+ K +
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIV 286
K D+ +Y ++ GK E++ ++
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRML 296
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 7/232 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ D Y +L+ GY G ++A + E + + + V +++L L +F
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREML--RNGITPGVVTYSTILHGLFTTRRFS 605
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EA +L+ M N+ +N++ +G +A ++F+ + + +
Sbjct: 606 EAKELYLNMITSGK-----QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
FN +I L K+G +A L+ +S G+ PD +TY L+ + E +++ F M
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAME 720
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKAL 273
SG PN + N LV +L+ G + A ++ + +K +AS M+ +L
Sbjct: 721 KSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISL 772
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 101/227 (44%), Gaps = 8/227 (3%)
Query: 103 ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
+ LF+RM E ++ +L +++++ +C GR + F + + + +
Sbjct: 75 VVSLFNRMIRECTI--KVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVI 132
Query: 163 NNLIDQLCKNGMLAEAEE-LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
N L+ LC L EA + L M + G PD +Y L+ R ++ M
Sbjct: 133 NQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192
Query: 222 DSGLR---PNLAVYNRLVGKLVQVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKALSDGG 277
DS R PN+ Y ++ G +D+A + F ++M + ++ + +Y ++ L
Sbjct: 193 DSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ 252
Query: 278 KLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+D + ++D G ++ + G LS G+ +EVV+++E+
Sbjct: 253 VVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSI-GKWKEVVRMLEE 298
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCK-NGMLAEAEE------LYGEM---SDKGVN 191
DA+++F + + ++FN+L+ + + +G + E L+ M V
Sbjct: 32 DALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVT 91
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
PD TY +L+ + R++ G F ++ SG R N V N+L+ L L EA
Sbjct: 92 PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREA--- 148
Query: 252 FDIMVKKL-----KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
DI++K++ D SY ++K + + +E LE++ + D G
Sbjct: 149 MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQG 196
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 10/277 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + +V++ +M ++G S + E ++ GV V Y L+ G+ +
Sbjct: 39 RGCFPNALVFNGIMDALCKEGRSAEAYGFIETMRSM--GVSPTIVTYNLLIDGFCKEEKL 96
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A+E E G + + V N+ L LC GK D+AL LF M K++ ++
Sbjct: 97 HRALEILQEMTGRGH--EPNHVTYNTFLHGLCKYGKVDDALALFRAMTE-----KKIRLD 149
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + + DG C G+ +A + +M C P +N ++ LCK + EA +L+
Sbjct: 150 VYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFK 209
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M+ G+ PD T+G+++ +R+DD ++M +GL P +YN L+ L + G
Sbjct: 210 RMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAG 269
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
+ EA M+ + L + +Y M K +D L
Sbjct: 270 RVSEAYRLLQEMISRGLSPNSRTYALMRKQQTDDSNL 306
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+F ++ DG C R DA E+ MGE C P+ L FN ++D LCK G AEA M
Sbjct: 12 TFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFIETM 71
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
GV+P TY LL+D + ++ ++M G PN YN + L + G +
Sbjct: 72 RSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKV 131
Query: 246 DEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
D+A + F M KK+++D Y ++ L GKL E ++ + + G +
Sbjct: 132 DDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVP-KPGCYNA 190
Query: 305 VKGELSKEGREEEVVKLMEK 324
+ L K R E KL ++
Sbjct: 191 ILSWLCKGSRINEAHKLFKR 210
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 148/314 (47%), Gaps = 17/314 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG D V Y+ L+ G + G+ + LF++++ + G+ + V Y +++ GY
Sbjct: 652 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR--GLTPNCVTYAAMVDGYCKS 709
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
A + E + V A N +L+ C KF++AL LF M K
Sbjct: 710 KNPTAAFQLLEEMLLR--GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE-----KGF 762
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A + SFN + +GYC G+ ++A + +M E + P+ +++ +LID CK GM+ EA+
Sbjct: 763 ASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKR 821
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM ++ V P TY L+ + + + + F +MV G+ P+ Y ++
Sbjct: 822 LWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYC 881
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDD------ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G + EA D I+VK + M + + + G +DE E++ ++ G
Sbjct: 882 REGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 941
Query: 294 GIEFSEELQEFVKG 307
+ + L + V G
Sbjct: 942 WVSNTTSLGDLVDG 955
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 160/356 (44%), Gaps = 46/356 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G +P+ Y+ L+ GF+R GD + FR+ +E+ G+ ++ +++ +L+ G G E
Sbjct: 306 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVA--CGIEANLIIWNTLLNGVCKAGKME 363
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+E E + V+ + + +++ C A +L D MK ++LA +
Sbjct: 364 KALEIMQEMM--EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK-----RKLAPTV 416
Query: 125 GSFNVMADGYC-----------------------------------GQGRFKDAIEVFRK 149
+++V+ +G C +GR +++ + +
Sbjct: 417 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 476
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M E PD +N+LI CK + EA EM ++ + P+ +TYG +D +
Sbjct: 477 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 536
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKF 268
++ YF +M+ G+ PN+ +Y L+ + G + EA S F I+ +++ D +Y
Sbjct: 537 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 596
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ LS GK+ E I + + G + + + G K+G ++ +L+E+
Sbjct: 597 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS-CKQGNVDKASQLLEE 651
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 9/253 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G + VVY+ LM ++G + + E ++E+ G++ D Y SL+ G+
Sbjct: 442 MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ--GILPDVFCYNSLIIGFCKA 499
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA E + ++ +A + +D G+ + A + F+ M + P
Sbjct: 500 KRMEEARTYLMEML--ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP--- 554
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+G + + +G+C +G +A VFR + R D +++ LI L +NG + EA
Sbjct: 555 --NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 612
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ E+ +KG+ P+ +TY L+ + VD + +M G+ P++ YN L+ L
Sbjct: 613 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 672
Query: 241 QVGMLDEAKSFFD 253
+ G ++ AK+ FD
Sbjct: 673 KAGEIERAKNLFD 685
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 11/271 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y + G+ + G+ + R F E+ GV+ + +Y +L++G+ +G EA +
Sbjct: 523 TYGAFIDGYSKAGEMEIADRYFNEMLS--CGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 580
Query: 72 EAVGENSSVKMSAVANNSVL-DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ S + V SVL L NGK EA +F ++ K L N ++N +
Sbjct: 581 FIL---SRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQE-----KGLLPNAFTYNSL 632
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C QG A ++ +M +PD +++N LID LCK G + A+ L+ ++ +G+
Sbjct: 633 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 692
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ TY ++D + +M+ G+ P+ +YN ++ + ++A
Sbjct: 693 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 752
Query: 251 FFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
F M++K S+ +++ GKL E
Sbjct: 753 LFQEMLEKGFASTVSFNTLIEGYCKSGKLQE 783
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 9/223 (4%)
Query: 35 ELKEKL--GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLD 92
ELK + G+V D Y L+ G+ M+ EA E + + +K + N+++D
Sbjct: 262 ELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMI--DVGLKPEPITYNALID 319
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
G ++A ++ D M + NL +N + +G C G+ + A+E+ ++M E
Sbjct: 320 GFMRQGDIEQAFRIKDEMV-----ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 374
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
PD+ +++ LI+ C+ +A A EL EM + + P TY ++++ +
Sbjct: 375 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 434
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
R+MV +GL+PN VY L+ + G ++E++ + M
Sbjct: 435 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 477
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 129/290 (44%), Gaps = 30/290 (10%)
Query: 46 DGVVYGSLMKGYFMKGMEEEAMECYNEAVG-ENSSVKMSAVANNSVLDALCNNGKFDEAL 104
+ V++ LM Y G EA+ N +G +N + S ++ NS+L L K +
Sbjct: 153 NSVIFDMLMDSYRKMGFLVEAV---NVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFW 209
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
K+FD M P ++ ++ M +C G KDA V +MGE
Sbjct: 210 KVFDGMCAHKVLP-----DVYTYTNMISAHCKVGNVKDAKRVLLEMGE------------ 252
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDS 223
K +L EA EL M DKG+ PD YTY +L++ C E R + +M+D
Sbjct: 253 ------KARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCME-KRSREAKLMLLEMIDV 305
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEI 282
GL+P YN L+ ++ G +++A D MV ++ + + ++ + GK+++
Sbjct: 306 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 365
Query: 283 LEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
LEI+ +++ G S+ ++G + L E K+R+ A
Sbjct: 366 LEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPT 415
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 10/271 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ YS ++ G R G+ G + E+ + G+ + VVY +LM + +G EE+
Sbjct: 417 LTYSVIINGLCRCGNLQGTNAILREMV--MNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 474
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ NS++ C + +EA M +RL N ++
Sbjct: 475 ERM--REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE-----RRLRPNAHTYGAF 527
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DGY G + A F +M P+ + LI+ CK G + EA ++ + + V
Sbjct: 528 IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 587
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
D TY +L+ ++ + F ++ + GL PN YN L+ + G +D+A
Sbjct: 588 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 647
Query: 251 FFDIM-VKKLKMDDASYKFMMKALSDGGKLD 280
+ M +K + D +Y ++ L G+++
Sbjct: 648 LLEEMCIKGINPDIVTYNILIDGLCKAGEIE 678
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 135/287 (47%), Gaps = 10/287 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ G+ + G S +F E+ +K G++ D V + SL+
Sbjct: 246 MMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQK--GIMPDVVTFTSLIHVMCKA 303
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A+ + ++M+ V +++D C G D+AL M+ R+
Sbjct: 304 GNLEWAVTLVRQM--RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQ-----CRI 356
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +N + +GYC GR +A E+ +M PD ++++ +I CKN A E
Sbjct: 357 KPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFE 416
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M +KGV PD TY L+ E R+ D F+ M+ GL+P+ Y L+
Sbjct: 417 LNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHC 476
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIV 286
+ G ++ A S D MVK + D +Y ++ LS + E +++
Sbjct: 477 KEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 523
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 130/283 (45%), Gaps = 11/283 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+V + Y+ ++L + D R F+ + GV + Y L++ +G +
Sbjct: 111 GYVPSVLAYNAVLLA-LSDASLTSARRFFDSMLSD--GVAPNVYTYNILIRALCGRGHRK 167
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ + G + V N+++ A G+ D A +L M + P NL
Sbjct: 168 EALSILRDMRGAGCGPNV--VTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKP-----NL 220
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN M +G C G+ +DA +VF +M +PD +S+N L+ CK G EA ++ E
Sbjct: 221 VTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAE 280
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ KG+ PD T+ L+ + ++ T R+M + GL+ N + L+ + G
Sbjct: 281 MTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 340
Query: 245 LDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIV 286
LD+A M + ++K Y ++ G++DE E++
Sbjct: 341 LDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELL 383
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 113/229 (49%), Gaps = 11/229 (4%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S +A N+VL AL ++ A + FD M ++ P N+ ++N++ CG+G K+
Sbjct: 115 SVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAP-----NVYTYNILIRALCGRGHRKE 168
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ + R M C P+ +++N L+ + G + AE L G M D G+ P+ T+ +++
Sbjct: 169 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVN 228
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMD 262
+ +++D F +M+ GL P+ YN LVG + G EA S F M +K M
Sbjct: 229 GMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 288
Query: 263 D-ASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVK 306
D ++ ++ + G L+ + +V + + G + F+ + F K
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCK 337
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 132/312 (42%), Gaps = 31/312 (9%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V YS ++ + ++ D+ F L +++ EK GV+ D + Y SL++ +
Sbjct: 386 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK--GVLPDAITYSSLIRVLCEE 443
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A + + ++ S++D C G + AL L D+M P
Sbjct: 444 KRLSDAHVLFKNMI--KLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLP--- 498
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ------------ 168
++ +++V+ +G R +A ++ K+ P ++ L+
Sbjct: 499 --DVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLAL 556
Query: 169 ---LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
C G++ EA+++Y M D+ N D Y +L+ V ++ ++M+ G
Sbjct: 557 LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGF 616
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSD----GGKLDE 281
PN L+ L + GM+ EA ++ + DA KAL D G +D
Sbjct: 617 APNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEAS---KALIDLNLNEGNVDA 673
Query: 282 ILEIVGGILDDG 293
+L+++ G+ DG
Sbjct: 674 VLDVLHGMAKDG 685
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 132/320 (41%), Gaps = 25/320 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V ++ L+ GF + G D +++ + V Y +L+ GY M G
Sbjct: 319 RGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQ--CRIKPSVVCYNALINGYCMVGRM 376
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA E +E E +K V ++++ A C N A +L +M + P +
Sbjct: 377 DEARELLHEM--EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAI--- 431
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++ + C + R DA +F+ M + PD ++ +LID CK G + A L+
Sbjct: 432 --TYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHD 489
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV-----GK 238
+M GV PD TY +L++ + R + K+ P Y+ L+ +
Sbjct: 490 KMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAE 549
Query: 239 LVQV----------GMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
L V G+++EA + M+ + +D + Y ++ G + + L
Sbjct: 550 LKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHK 609
Query: 288 GILDDGGIEFSEELQEFVKG 307
+L G S ++G
Sbjct: 610 QMLQRGFAPNSTSTISLIRG 629
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 24/243 (9%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ L+ G ++G+ + L +++ + GV+ D V Y L+ G
Sbjct: 456 MIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVK--AGVLPDVVTYSVLINGLSKS 513
Query: 61 GMEEEAMEC-----YNEAVGENSSVKMSAVANN----------SVLDALCNNGKFDEALK 105
EA + + E + N+ K A+ + ++L C G +EA K
Sbjct: 514 ARAMEAQQLLFKLYHEEPIPANT--KYDALMHCCRKAELKSVLALLKGFCMKGLMNEADK 571
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
++ M + + ++ ++V+ G+C G A+ ++M + +P++ S +L
Sbjct: 572 VYQSMLD-----RNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISL 626
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
I L +NGM+ EA+++ ++ + D L+D VD M GL
Sbjct: 627 IRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGL 686
Query: 226 RPN 228
P+
Sbjct: 687 LPS 689
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 138/284 (48%), Gaps = 10/284 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+ V + Y L+ G + G+ + +++ K GV + V++ +LM GY KGM
Sbjct: 326 RRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSK--GVDVNRVIFNTLMDGYCKKGMI 383
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA+ N + + ++ A N + C + + +EA +L M+ P N
Sbjct: 384 DEALRLQN--IMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAP-----N 436
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ SF+++ D YC + F +A +F+ M + +P +++N I++ CK G + EA +L
Sbjct: 437 VVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLIN 496
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM ++G+ PD YTY L+D VD F +M GL N+ Y ++ L + G
Sbjct: 497 EMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDG 556
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
DEA +D M K+ + DD Y ++ +L G L LE V
Sbjct: 557 RADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENV 600
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 143/329 (43%), Gaps = 46/329 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D +Y+ ++ + G+ F LF+E+ E+ +V + YG+L+ G
Sbjct: 288 MLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTER--RLVPNAYTYGALINGACKA 345
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A N+ ++ V ++ V N+++D C G DEAL+L + M+ K
Sbjct: 346 GEMKAAEMMVNDM--QSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQ-----KGF 398
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + N++A G+C R ++A + M E +P+ +SF+ LID CK AEA
Sbjct: 399 EIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARR 458
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M KG P TY ++ + ++++ +M + GL P+ Y L+
Sbjct: 459 LFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGER 518
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
G +D A F+ M + L + +Y I+ G
Sbjct: 519 ASGNVDRALELFNEMPQLGLNRNVVTYTV----------------IISG----------- 551
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKERE 328
LSK+GR +E KL ++ +E
Sbjct: 552 ---------LSKDGRADEAFKLYDEMNKE 571
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF D +L R G+ + ++ + G+ + +++ G KG
Sbjct: 151 KGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVD--SGIEIRVCSWTAVVDGLCKKGEV 208
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDA---LCNNGKFDEALKLFDRMKNEHNPPKRL 120
A +E V + K S + N++L+ + + G +E L L ++ ++N
Sbjct: 209 VRAKALMDELVCK--GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYN----- 261
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ ++ + Y + ++A ++F +M + PD + ++I+ CK G + A
Sbjct: 262 ---VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFV 318
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM+++ + P+ YTYG L++ + + M G+ N ++N L+
Sbjct: 319 LFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYC 378
Query: 241 QVGMLDEAKSFFDIMVKK 258
+ GM+DEA +IM +K
Sbjct: 379 KKGMIDEALRLQNIMQQK 396
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 139/279 (49%), Gaps = 13/279 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGFV D Y L++G +DGD D LFEE K G+ V+Y +L+KG +G+
Sbjct: 322 KGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGK--GLKPSIVLYNTLIKGLSQQGLV 379
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A++ N+ E S + N V++ LC G +A L + + P +
Sbjct: 380 LKALQLMNDMSKEGMSPDIWTY--NLVINGLCKMGCVSDANNLLNAAIAKGYLP-----D 432
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN + DGYC + + +AI + M + +PD +++N++++ LCK + E +
Sbjct: 433 IFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFK 492
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ +KG P+ TY +L+++ + +V + ++ + GL P+ + ++ G
Sbjct: 493 MIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNG 552
Query: 244 MLDEAKSFFDIMVKKLKMDD--ASYKFMMKALSDGGKLD 280
LDEA F M ++ ++ A+Y M+ A S+ KLD
Sbjct: 553 DLDEAYQLFRRMEQQYRICHTVATYNIMINAFSE--KLD 589
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG++ D ++ L+ G+ + D + + + GV D + Y S++ G
Sbjct: 427 KGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSH--GVTPDVITYNSILNGLCKAAKP 484
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+ ME + + + E + + + N ++++LC K EAL L + ++N P +
Sbjct: 485 EDVMETF-KMIMEKGCLP-NIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPV--- 539
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
SF + G+C G +A ++FR+M +YR ++N +I+ + + A++L+
Sbjct: 540 --SFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLF 597
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM DKG +PD YTY +++D +V V+ G + K ++ G P+L + R++ L
Sbjct: 598 HEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQ 657
Query: 243 GMLDEAKSFFDIMVK 257
+ EA +MV+
Sbjct: 658 HRVHEAVGIVHLMVR 672
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 123/282 (43%), Gaps = 19/282 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D ++ + F R RL + + G + VVY +++ G++ + +
Sbjct: 141 GIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQ--GCELNAVVYCTVISGFYEENYQV 198
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR-MKNEHNPPKRLAVN 123
EA E +N+ + ++ N ++ LC G E KL ++ +KN P N
Sbjct: 199 EAYELFNKMLRLGIFPHIATF--NKLMHILCKKGHLQEGEKLLNKVLKNGVCP------N 250
Query: 124 LGSFNVMADGYCGQG-------RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
L +FN+ G C +G + +A KM PD ++N +I K G +
Sbjct: 251 LFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQ 310
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A + + KG PDE+TY L+ + +D F + + GL+P++ +YN L+
Sbjct: 311 DASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLI 370
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
L Q G++ +A + M K+ + D +Y ++ L G
Sbjct: 371 KGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMG 412
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 107/231 (46%), Gaps = 8/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M+ G D + Y+ ++ G + + V F+ + EK G + + + Y L++
Sbjct: 459 MWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEK--GCLPNIITYNILIESLCKA 516
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA++ E N + V+ +V+ CNNG DEA +LF RM+ ++ R+
Sbjct: 517 RKVTEALDLLEEI--RNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQY----RI 570
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++N+M + + + A ++F +MG+ C PD+ ++ +ID CK G + +
Sbjct: 571 CHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYD 630
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ + G P T+G +++ +RV + MV +G+ P V
Sbjct: 631 FLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 4/190 (2%)
Query: 134 YCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD 193
Y +G+ ++A++VF +M Y C P S+N +++ L + G +A ++Y M +G+ PD
Sbjct: 86 YGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPD 145
Query: 194 EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
T+ + + + R M G N VY ++ + EA F+
Sbjct: 146 VCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFN 205
Query: 254 IMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSK- 311
M++ + A++ +M L G L E +++ +L +G F++G K
Sbjct: 206 KMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKG 265
Query: 312 --EGREEEVV 319
EG +VV
Sbjct: 266 VLEGANSKVV 275
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 149/317 (47%), Gaps = 14/317 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P Y+Y +++G+ G D + L E ++K G + + Y ++ KG EA+
Sbjct: 336 PCAYAYNTMIMGYGSAGKFDEAYSLLE--RQKARGCIPSVIAYNCILTCLGKKGRLGEAL 393
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E + ++++ +S N ++D LC G+ + A K+ D MK P N+ +
Sbjct: 394 RTFEE-MKKDAAPNLSTY--NVLIDMLCKAGEVEAAFKVRDAMKEAGLFP-----NVMTV 445
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N+M D C + +A +F M CSPD ++F +LID L K G + +A LY +M D
Sbjct: 446 NIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLD 505
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
P+ Y L+ + F+ R +DG F++M+ G P+L + N + + + G +
Sbjct: 506 SDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGK 565
Query: 248 AKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
++ F +I + D SY ++ L G E E+ + + G + + F+
Sbjct: 566 GRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFID 625
Query: 307 GELSKEGREEEVVKLME 323
G K G+ + +L+E
Sbjct: 626 G-FCKSGKVNKAYQLLE 641
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 141/276 (51%), Gaps = 10/276 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V + L+ G + G D +RL+E++ + + + VVY SL+K +F G +E+ +
Sbjct: 476 DEVTFCSLIDGLGKQGRVDDAYRLYEQMLD--SDKIPNAVVYTSLIKSFFKCGRKEDGHK 533
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ E + S + + N+ +D + G+ + LF+ +K+ P ++ S++
Sbjct: 534 IFKEMIHRGCSPDLRLL--NAYMDCVFKAGETGKGRALFEEIKSRGFIP-----DVMSYS 586
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
++ G G ++ E+F M E C DT ++N ID CK+G + +A +L EM K
Sbjct: 587 ILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTK 646
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G P TYG ++D +++R+D+ F + +GL N+ +Y+ L+ +VG +DEA
Sbjct: 647 GRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEA 706
Query: 249 KSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEIL 283
++M K L + ++ ++ AL +++E L
Sbjct: 707 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 742
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 130/286 (45%), Gaps = 45/286 (15%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME-EEA 66
AD V+Y+ + F + G D ++ F E+K G++ D V Y S++ G KG +EA
Sbjct: 266 ADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSH--GLLPDDVTYTSMI-GVLCKGNRLDEA 322
Query: 67 MECYNEAVGENSSVKM----------------------------------SAVANNSVLD 92
+E + E + +N +V S +A N +L
Sbjct: 323 VEIF-EQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILT 381
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
L G+ EAL+ F+ MK + P NL ++NV+ D C G + A +V M E
Sbjct: 382 CLGKKGRLGEALRTFEEMKKDAAP------NLSTYNVLIDMLCKAGEVEAAFKVRDAMKE 435
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
P+ ++ N +ID+LCK L EA ++ M+ K +PDE T+ L+D + RVDD
Sbjct: 436 AGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDD 495
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+ +M+DS PN VY L+ + G ++ F M+ +
Sbjct: 496 AYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHR 541
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 18/276 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF+ D + YS L+ G V+ G + + LF +KE+ G V D Y + + G+ G
Sbjct: 576 RGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQ--GCVLDTHAYNTFIDGFCKSGKV 633
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + E + + + V SV+D L + DEA LF+ K+ L +N
Sbjct: 634 NKAYQLLEEM--KTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG-----LELN 686
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + DG+ GR +A + ++ + +P+ ++N L+D L K + EA +
Sbjct: 687 VVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQ 746
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + P+ TY +L++ V + + ++++M GL+PN Y ++ L + G
Sbjct: 747 NMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAG 806
Query: 244 MLDEAKSFFDIMVKKLKM-----DDASYKFMMKALS 274
+ EA S F+ + K D ASY +++ LS
Sbjct: 807 NIAEASSLFE----RFKANGGVPDSASYNAIIEGLS 838
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 138/290 (47%), Gaps = 15/290 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D Y+ + GF + G + ++L EE+K K G V YGS++ G
Sbjct: 611 QGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTK--GRQPTVVTYGSVIDGLAKIDRL 668
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + EA +++ ++++ V +S++D G+ DEA + + + K L N
Sbjct: 669 DEAYMLFEEA--KSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ-----KGLTPN 721
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + D +A+ F+ M + +P+ ++++ LI+ LC+ +A +
Sbjct: 722 VYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQ 781
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +G+ P+ TY ++ + + + ++ F + +G P+ A YN ++ L
Sbjct: 782 EMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSR 841
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILE---IVGGIL 290
EA F+ ++K + K + AL D + DE LE IVG +L
Sbjct: 842 RAMEAYKIFE--ETRMKGCNIHTKTCI-ALLDALQKDECLEQAAIVGAVL 888
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 5/198 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+V+ G+ D AL L D MK+ L ++ +NV D + G+ A + F
Sbjct: 237 TTVIRVFAREGRLDAALSLLDEMKSNC-----LHADIVLYNVCIDCFGKAGKVDMAWKFF 291
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
++ + PD +++ ++I LCK L EA E++ +M P Y Y ++
Sbjct: 292 HEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSA 351
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
+ D+ + + G P++ YN ++ L + G L EA F+ M K + ++Y
Sbjct: 352 GKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYN 411
Query: 268 FMMKALSDGGKLDEILEI 285
++ L G+++ ++
Sbjct: 412 VLIDMLCKAGEVEAAFKV 429
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 6/199 (3%)
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
A +++ AL + + D L LF +M+ V++ F + + +GR A+
Sbjct: 200 AYTTLIGALSSVQESDIMLTLFHQMQELG-----YEVSVHLFTTVIRVFAREGRLDAALS 254
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+ +M D + +N ID K G + A + + E+ G+ PD+ TY ++
Sbjct: 255 LLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLC 314
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA- 264
+ NR+D+ F +M + P YN ++ G DEA S + + +
Sbjct: 315 KGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVI 374
Query: 265 SYKFMMKALSDGGKLDEIL 283
+Y ++ L G+L E L
Sbjct: 375 AYNCILTCLGKKGRLGEAL 393
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
RK + C P+ ++++L+ + KN E++ GEMS G P T L+ +C +
Sbjct: 120 RKTDQALC-PE--AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKS 176
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
N++ +G + M RP + Y L+G L V D + F M ++L + + +
Sbjct: 177 NKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQM-QELGYEVSVHL 235
Query: 268 F--MMKALSDGGKLDEILEIV 286
F +++ + G+LD L ++
Sbjct: 236 FTTVIRVFAREGRLDAALSLL 256
>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 457
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 147/315 (46%), Gaps = 14/315 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D + Y+ L+ G+ R D + + +KE G+ D V Y SL G K + +
Sbjct: 37 GLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKE--AGINPDVVSYNSLSSGAVRKCLLQ 94
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM--KNEHNPPKRLAV 122
++++ ++E + S ++ + N ++ GK +EA +F + + E P
Sbjct: 95 KSLDLFDEML--QSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYP------ 146
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ S+NVM +G C G +A+ +FR + P+ L++N +I+ LCK LA+A +
Sbjct: 147 SMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVL 206
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
E D G P+ TY +M CF R++ G +M G + Y +V LV+
Sbjct: 207 NEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKT 266
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G ++EA + M+ L D ASY M+ G+ DE L +V I + G++ +
Sbjct: 267 GRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEI-EKQGMKCDQYT 325
Query: 302 QEFVKGELSKEGREE 316
+ L K+G E
Sbjct: 326 HTIIIHGLCKDGNFE 340
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 134/317 (42%), Gaps = 13/317 (4%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ ++ G ++G + LF L+ + G V + + Y +++ G +A NE
Sbjct: 151 YNVMINGLCKNGYVNNALMLFRNLRRR--GFVPEVLTYNAMINGLCKARRLADARRVLNE 208
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ + +A+ +V+ G+ ++ L++ M+ K + ++ +
Sbjct: 209 FC--DFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRR-----KGFTFDGFAYCTVVA 261
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
GR ++A E+ KM PD S+N +I+ C+ G EA L E+ +G+
Sbjct: 262 ALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKC 321
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
D+YT+ +++ + + + M G NL +N ++ L + G +D+A F
Sbjct: 322 DQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVF 381
Query: 253 DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE 312
D M K D +Y ++ L K +++ ++D G + Q V L+
Sbjct: 382 DSMEVK---DSFTYTSLLHNLCRAKKFRIASKLLVASIED-GFQILRATQRAVIDGLTTS 437
Query: 313 GREEEVVKLMEKKEREK 329
G E K+ K +R +
Sbjct: 438 GLVYEARKVKLKIQRAR 454
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
N I +CK+ +A+AE + + G+NPD TY L+D +D +M +
Sbjct: 11 NITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKE 70
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+G+ P++ YN L V+ +L ++ FD M++ ++ D SY +M GK +E
Sbjct: 71 AGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEE 130
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
+ I + G I S + L K G + L R
Sbjct: 131 ANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRR 177
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 10/277 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + +V++ +M ++G S + E ++ GV V Y L+ G+ +
Sbjct: 39 RGCFPNALVFNGIMDALCKEGRSAEAYGYIETMRSM--GVSPTIVTYNILIDGFCKEEKL 96
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A+E E G + + V N+ L LC GK D+AL LF M K++ ++
Sbjct: 97 HRALEILQEMTGRGH--EPNHVTYNTFLHGLCKYGKVDDALALFRAMTE-----KKIRLD 149
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + + DG C G+ +A + +M C P +N ++ LCK + EA +L+
Sbjct: 150 VYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFK 209
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M+ G+ PD T+G+++ +R+DD ++M +GL P +YN L+ L + G
Sbjct: 210 RMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAG 269
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
+ EA M+ + L + +Y M K +D L
Sbjct: 270 RVSEAYRLLQEMISRGLSPNSRTYALMRKQQTDDSNL 306
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 2/200 (1%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+F ++ DG C R DA E+ M E C P+ L FN ++D LCK G AEA M
Sbjct: 12 TFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETM 71
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
GV+P TY +L+D + ++ ++M G PN YN + L + G +
Sbjct: 72 RSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKV 131
Query: 246 DEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
D+A + F M KK+++D Y ++ L GKL E ++ + + G +
Sbjct: 132 DDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVP-KPGCYNA 190
Query: 305 VKGELSKEGREEEVVKLMEK 324
+ L K R E KL ++
Sbjct: 191 ILSWLCKGSRINEAHKLFKR 210
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 133/279 (47%), Gaps = 8/279 (2%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K D V YS ++ GF + G+ D + E+ + G+ D V Y S++ G G
Sbjct: 71 KSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTR-DGIAPDVVTYTSVVDGLCRDGKM 129
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A E E + V+ ++++ CN K DEALKL+ + + +
Sbjct: 130 DRACEMVREM--KLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS----WKPD 183
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + DG+C G + A+++ M +C P+ +++++L+ LCK G L +A +L+
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M+ KG P+ TY L+ ++VD +M + P+ YN L+ ++G
Sbjct: 244 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLG 303
Query: 244 MLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDE 281
++EAK F M K + D +Y +++ + +L+E
Sbjct: 304 RIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEE 342
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 150/355 (42%), Gaps = 44/355 (12%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
V + V YS L+ G + GD D LF + K G V + V Y +L+ G + A
Sbjct: 216 VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSK--GCVPNVVTYTTLIHGLCAAHKVDAA 273
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV---- 122
+E + V+ N++LD C G+ +EA +LF M + P R+
Sbjct: 274 RLLMDEMTA--TCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLV 331
Query: 123 ---------------------------NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
++ +++++ GY RF +A E ++M
Sbjct: 332 RGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV 391
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+P+ +++++LID LCK G + A E+ M +K V P T+ ++ A + +D+
Sbjct: 392 APNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWK 451
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK--------MDDASYK 267
M GL P + Y L+ + G ++ A F++M KK K + + ++
Sbjct: 452 LLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFS 511
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+++ L ++D+ + +V + E+ V G L + GR EE KL+
Sbjct: 512 ALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDG-LLRAGRTEEAGKLI 565
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 112/264 (42%), Gaps = 45/264 (17%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA----------- 131
+ V ++D C + +AL F++M+ P +R ++NV+
Sbjct: 6 TVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNER------TYNVVVNGLCKARLTSK 59
Query: 132 -------------------------DGYCGQGRFKDAIEVFRKMGEYR-CSPDTLSFNNL 165
+G+C QG A E+ R+M +PD +++ ++
Sbjct: 60 AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSV 119
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV-DSG 224
+D LC++G + A E+ EM KGV PD++T+ L+ +VD+ +++++ S
Sbjct: 120 VDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS 179
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEIL 283
+P++ Y L+ + G L++A +M +K + +Y ++ L G LD+ L
Sbjct: 180 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 239
Query: 284 EIVGGILDDGGIEFSEELQEFVKG 307
++ + G + + G
Sbjct: 240 DLFRRMTSKGCVPNVVTYTTLIHG 263
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C P +++ +ID CK L +A + +M + V P+E TY ++++ +
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKMRE-FVAPNERTYNVVVNGLCKARLTSKAY 61
Query: 215 TYFRKMVD-SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMMK 271
++M D + P+L Y+ ++ + G +D A MV + + D +Y ++
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 272 ALSDGGKLDEILEIV 286
L GK+D E+V
Sbjct: 122 GLCRDGKMDRACEMV 136
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 76/223 (34%), Gaps = 41/223 (18%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V YS ++ G+ R +E+ + V + V Y SL+ G G +
Sbjct: 355 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR--NVAPNAVTYSSLIDGLCKAGRVD 412
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA--- 121
AME V N V+ S NSV+ ALC G DEA KL M P +
Sbjct: 413 HAMEVLKNMV--NKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT 470
Query: 122 ----------------------------------VNLGSFNVMADGYCGQGRFKDAIEVF 147
V +F+ + G C A+ V
Sbjct: 471 LLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVV 530
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
++ C P ++D L + G EA +L +S G+
Sbjct: 531 EELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 157/306 (51%), Gaps = 15/306 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
++ L+ GF +D + G ++F+E+ ++ V+ + + Y SL+ G G EA+
Sbjct: 297 TTFNILIDGFWKDDNLPGSLKVFKEMLDQ--DVIPNVITYNSLINGLCNGGKINEAIGMR 354
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE-HNPPKRLAVNLGSFNV 129
++ V ++ V+ + + +S+++ C NG EAL +FD +K + P R+ +N+
Sbjct: 355 DKMV--SAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRM------YNM 406
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ D YC G+ D + +M PD ++N LI LC+NG + A++L+ ++++KG
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG 466
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ PD T+ +LM+ A ++M GL+P YN ++ + G L A
Sbjct: 467 L-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAAT 525
Query: 250 SFFDIMVK--KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+ M K +L+M+ ASY +++ S GKL++ ++ +L+ G + + E VK
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP-NRITYEIVKE 584
Query: 308 ELSKEG 313
E+ +G
Sbjct: 585 EMVDKG 590
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 41/299 (13%)
Query: 19 GFVRDGDSDGVFRLFEELKEK----LGGVVSDGVVYGSLMKGYFMKGMEE---------- 64
GFVR+G V +F + + +++D +V F G E
Sbjct: 126 GFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYK 185
Query: 65 -EAMECYNEAVG---ENSS--------------VKMSAVANNSVLDALCNNGKFDEALKL 106
AM C V +N S ++ + N V++ALC GK ++A +
Sbjct: 186 LSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245
Query: 107 FDRMKNEHNPPKRLAVNLGSFNVMADGYC---GQGRFKDAIEVFRKMGEYRCSPDTLSFN 163
+ MK P N+ S+N + DGYC G G+ A V ++M E SP+ +FN
Sbjct: 246 MEDMKVYGYSP-----NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFN 300
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
LID K+ L + +++ EM D+ V P+ TY L++ ++++ KMV +
Sbjct: 301 ILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSA 360
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDE 281
G++PNL Y+ L+ + GM+ EA FD + + + Y ++ A GK+D+
Sbjct: 361 GVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDD 419
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 10/242 (4%)
Query: 39 KLGGVVSDGVVYGSLMKGYFM---KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALC 95
K+ G + V Y +L+ GY G +A E V S ++ N ++D
Sbjct: 250 KVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTF--NILIDGFW 307
Query: 96 NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
+ +LK+F M ++ P N+ ++N + +G C G+ +AI + KM
Sbjct: 308 KDDNLPGSLKVFKEMLDQDVIP-----NVITYNSLINGLCNGGKINEAIGMRDKMVSAGV 362
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
P+ +++++LI+ CKNGM+ EA +++ + +G P Y +L+DA ++ ++DDG
Sbjct: 363 QPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSD 275
+M G+ P++ YN L+ L + G ++ AK FD + K D ++ +M+
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCS 482
Query: 276 GG 277
G
Sbjct: 483 RG 484
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 118/259 (45%), Gaps = 12/259 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + Y L+ GF ++G +F+ +K + G +Y L+ Y
Sbjct: 357 MVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQ--GTRPTTRMYNMLIDAYCKL 414
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++ E E + N ++ LC NG + A KLFD++ N+ P
Sbjct: 415 GKIDDGFALKEEM--EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLP---- 468
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L +F+++ +GYC +G + A + ++M + P L++N ++ CK G L A
Sbjct: 469 --DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATN 526
Query: 181 LYGEM-SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ +M ++ + + +Y +L+ + +++D +M++ GL PN Y + ++
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEM 586
Query: 240 VQVGMLDEAK-SFFDIMVK 257
V G + + + F++ K
Sbjct: 587 VDKGFVPDIEGHLFNVSTK 605
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
S LD NG + +F + N + VN +++ Y RF+ E F+
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDN----VCVNSIIADMLVLAYANNSRFELGFEAFK 177
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+ G Y +S L+ L K A+ E LY EM + + P+ +T+ ++++A +
Sbjct: 178 RSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTG 237
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+++ M G PN+ YN L+ ++G
Sbjct: 238 KMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLG 272
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 166/363 (45%), Gaps = 43/363 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + +VYS L+ G R G LF+E+ + G+ ++ + Y SL+
Sbjct: 105 MINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQ--GIKANVITYNSLIHASCRF 162
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
G+ +EA +++ VGE + V +++D L GK EA K+F+ M + P
Sbjct: 163 GLWKEATRTFSQMVGE--GILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIV 220
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ + +++ S+N + +GYC G+ ++A+ +FRKM
Sbjct: 221 TYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKM 280
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+P ++ L+ L +NG + A+EL+ M G +P TY +L+D + +
Sbjct: 281 QYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCI 340
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFM 269
++ FR + +P++ +Y+ L+G + Q + A FD I L + +Y M
Sbjct: 341 EEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIM 400
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF-VKGELSKEGREEEVVKLME--KKE 326
+ L GKL E E + +++ G E E F ++G L +E +V K ME K+
Sbjct: 401 INGLCKEGKLLEA-ERLFVQMEESGCEQDEISFNFIIRGFL----QENQVQKAMEFLKRM 455
Query: 327 REK 329
REK
Sbjct: 456 REK 458
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 131/282 (46%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ + V S L+ G +G LF+++ G D ++YG L+
Sbjct: 4 GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTR--SGFQGDILLYGYLINALRKTRQAR 61
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+E + + E S V+D+LC +G + LK+F M N P N+
Sbjct: 62 RAVELHRRMLSEICSGNFFTYG--LVIDSLCKDGLAIKGLKMFREMINMGICP-----NV 114
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + +G C G+ ++A+ +F +M + +++N+LI C+ G+ EA + +
Sbjct: 115 IVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQ 174
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +G+ PD T+ L+D + +V + F M+ G PN+ YN L+ L
Sbjct: 175 MVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQ 234
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+D A F++MV++ +K+D SY ++ GK +E + +
Sbjct: 235 MDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTL 276
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 44/271 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ L+ G D RLFE + E+ G+ D + Y +L+ GY
Sbjct: 210 MIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVER--GIKIDVISYNTLINGYCTS 267
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEAM + + E + S +L AL NG+ A +LF+ M+ P
Sbjct: 268 GKTEEAMTLFRKMQYE--ELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSP--- 322
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMG--EYRCS---------------------- 156
+L ++ V+ DG C G ++AI+VFR + +Y+ S
Sbjct: 323 --SLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAME 380
Query: 157 -----------PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
P+ +++N +I+ LCK G L EAE L+ +M + G DE ++ ++
Sbjct: 381 IFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFL 440
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ N+V + ++M + PN +V LV
Sbjct: 441 QENQVQKAMEFLKRMREKNFSPNDSVTLMLV 471
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 112/220 (50%), Gaps = 18/220 (8%)
Query: 110 MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQL 169
MK+ + P NL + + + G C +G+ DA+E+F KM D L + LI+ L
Sbjct: 1 MKSGYQP------NLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINAL 54
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
K A EL+ M + + + +TYGL++D+ + G FR+M++ G+ PN+
Sbjct: 55 RKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNV 114
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE----ILE 284
VY+ L+ L +VG L EA + FD MV + +K + +Y ++ A G E +
Sbjct: 115 IVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQ 174
Query: 285 IVG-GILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+VG GIL D + F+ + LSK+G+ +E K+ E
Sbjct: 175 MVGEGILPD-VVTFTTLID-----HLSKKGKVQEAYKIFE 208
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 6/210 (2%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
V ++++ +C GK +AL+LFD+M L L + + A Q R A+
Sbjct: 10 VTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDIL---LYGYLINALRKTRQAR--RAV 64
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
E+ R+M CS + ++ +ID LCK+G+ + +++ EM + G+ P+ Y L++
Sbjct: 65 ELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGL 124
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDD 263
V ++ + F +MV G++ N+ YN L+ + G+ EA F MV + + D
Sbjct: 125 CRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDV 184
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++ ++ LS GK+ E +I ++ G
Sbjct: 185 VTFTTLIDHLSKKGKVQEAYKIFELMIKQG 214
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 135/292 (46%), Gaps = 10/292 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V+Y+ L+ F R+G ++ RL E ++E G+ D V + S + G
Sbjct: 216 GVQPNKVIYNTLISSFCREGRNEEAERLVERMRED--GLFPDVVTFNSRISALCSAGKIL 273
Query: 65 EAMECYNE-AVGENSSVKMSAVAN-NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA + + + E + + N +L+ C G +EA L + MK N +
Sbjct: 274 EASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGN-----LM 328
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
L S+N+ G G+ +A ++M + P+ SFN ++D LCKNG++++A +
Sbjct: 329 ELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIM 388
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
G M G+ PD TY L+ C +V +M+ G PN N L+ L +
Sbjct: 389 GLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKE 448
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
G + EA+ M ++ +D+ + ++ L GKLDE +EIV G+ G
Sbjct: 449 GRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHG 500
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 145/337 (43%), Gaps = 26/337 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V YS L+ G G + E+ + G + L+ + +
Sbjct: 391 MISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRR--GCSPNTYTCNILLHSLWKE 448
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK--------- 111
G EA + + S + V N V+D LC +GK DEA+++ + M
Sbjct: 449 GRIFEAEKLLQKM--NERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGN 506
Query: 112 ---------NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
+ + K+ +L +++++ +G C GR +A + F +M PD++ +
Sbjct: 507 LGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIY 566
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
+ I CK+G ++ A + +M +G N TY L+ N++ + M +
Sbjct: 567 DTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKE 626
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL---SDGGK 278
G+ PN+ YN ++ L + G + +A S D M++K + + +S++ ++KA SD G
Sbjct: 627 KGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGV 686
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
+ E+ EI I +S E + G E +E
Sbjct: 687 VKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKE 723
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+ N++ G C GRF+DA EVF KMG C P+ SF L+ C+ G+ A EL M
Sbjct: 153 TLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGM 212
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
GV P++ Y L+ + R ++ +M + GL P++ +N + L G +
Sbjct: 213 GSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKI 272
Query: 246 DEAKSFFDIMVKKLKMDD---------ASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
EA F + +++D+ ++ M++ G L+E +V + +G +
Sbjct: 273 LEASRIF----RDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNL 327
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 21/257 (8%)
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNE--HNPPKRLAVNLGSFNVMADGYCGQGR 139
+S V+ +++ L +G D A F +++ NPP V L +N++ + + +
Sbjct: 77 VSHVSLIALIRILAKSGLSDLAFSQFQSFRSQVPANPP---PVYL--YNMVLESSLREDK 131
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+++ M SP+T + N LI LC +G +A E++ +M KG P+E+++G+
Sbjct: 132 VDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGI 191
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
L+ M G++PN +YN L+ + G +EA+ + M +
Sbjct: 192 LVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDG 251
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVG--------GILDDGGIEFSEELQEFVKGELS 310
L D ++ + AL GK+ E I G+ F+ L+ F
Sbjct: 252 LFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFC----- 306
Query: 311 KEGREEEVVKLMEKKER 327
KEG EE L+E +R
Sbjct: 307 KEGMLEEAKTLVESMKR 323
>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12300, mitochondrial-like [Glycine max]
Length = 450
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 110/225 (48%), Gaps = 11/225 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG A+ V Y+ ++ GF + D LF+E+ +K +V V YGSLM G
Sbjct: 236 MTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQK--NMVPTIVTYGSLMDGLCKS 293
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E +E + + + NS++D LC NG D A+ LF++MK+ RL
Sbjct: 294 GRISYVWELIDEM--HDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXRF--DRL 349
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+F ++ DG C GR KDA EVF+ + D +N +I+ CK G+L EA
Sbjct: 350 -----TFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALT 404
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+ +M D G P T+ ++++A FE + D +M+ GL
Sbjct: 405 MRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEMIARGL 449
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 152/337 (45%), Gaps = 25/337 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G+ + ++ L+ G G + ++L + G+ D V YG+L+ G G
Sbjct: 134 RGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ--GIKFDQVSYGTLINGVCKIGDT 191
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A++ + G + K + N+++DALC EA LF M K ++ N
Sbjct: 192 RGAIKLVRKIDGRLT--KPNVEMYNTIIDALCKYQLVSEAYGLFSEMT-----AKGISAN 244
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S+N+M G+C +A+ +F++M + P +++ +L+D LCK+G ++ EL
Sbjct: 245 VVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELID 304
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM D+G+ D TY L+D + +D F KM D R + + L+ L + G
Sbjct: 305 EMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDX--RFDRLTFTILLDGLCKGG 362
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L +A+ F D++ K+ +D Y M+ G L+E L + + D+G I + +
Sbjct: 363 RLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFE 422
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+ L EK E +KAE E A
Sbjct: 423 IIINA-------------LFEKDENDKAEKLLHEMIA 446
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 115/229 (50%), Gaps = 11/229 (4%)
Query: 30 FRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNS 89
+ LF E+ K G+ ++ V Y ++KG+ M +EA+ + E +N + + V S
Sbjct: 230 YGLFSEMTAK--GISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKN--MVPTIVTYGS 285
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
++D LC +G+ +L D M + P ++ ++N + DG C G AI +F K
Sbjct: 286 LMDGLCKSGRISYVWELIDEMHDRGIP-----ADVITYNSLIDGLCKNGHLDRAIALFNK 340
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M + R D L+F L+D LCK G L +A+E++ ++ K + D Y Y ++++ +
Sbjct: 341 MKDXRF--DRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGL 398
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+++ T KM D+G P+ + ++ L + D+A+ M+ +
Sbjct: 399 LEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEMIAR 447
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 122/278 (43%), Gaps = 12/278 (4%)
Query: 52 SLMKGYFMKGMEEEAMECYNEAVGE-NSSVKM----SAVANNSVLDALCNNGKFDEALKL 106
S++ + ++ +++ ++AV + NS + M + N +LD+ + A+ L
Sbjct: 33 SILSNLILTKVKPPSIQNVDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSL 92
Query: 107 FDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
R++ + P + + N++ + +C G+ V K+ + P T++F LI
Sbjct: 93 SHRLELKGIQP-----DFFTLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLI 147
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
LC G + +A + ++ +G+ D+ +YG L++ ++ RK+ +
Sbjct: 148 KGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTK 207
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
PN+ +YN ++ L + ++ EA F M K + + SY M+K +DE L +
Sbjct: 208 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNL 267
Query: 286 VGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+ + + G L K GR V +L++
Sbjct: 268 FKEMHQKNMVPTIVTYGSLMDG-LCKSGRISYVWELID 304
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + G+ V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K ++A +LFD M N P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 110/231 (47%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ + LF+E+ G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLN--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 8/251 (3%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
+F + E G +SD V+ L+ Y G +A+ECY + + ++ V+
Sbjct: 51 VFAAILETKGTQISDIYVFSGLITAYLESGFLRDAIECYR--LTKEHKFRVPFDTXRKVI 108
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ L F ++ E+ P L FN++ + +G + A VF +
Sbjct: 109 EHLMKLKYFKLVWGFYEE-SLEYGYPASLYF----FNILMHSFVKEGEIRLAQSVFDAIT 163
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
++ P +SFN L++ K G L E L M GV PD YTY +L++ + ++++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKME 223
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
D F +M+++GL PN + L+ + G +D A + M+ + L D +Y ++
Sbjct: 224 DANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 271 KALSDGGKLDE 281
L G L +
Sbjct: 284 YGLCKKGDLKQ 294
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +I+ L K Y E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESL 128
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + + F + GLRP++ +N L+ +++G LD
Sbjct: 129 EYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E + M ++ D +Y ++ L K+++ E+ +L++G + +
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLI 248
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 249 DGH-CKNGR 256
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 147/323 (45%), Gaps = 44/323 (13%)
Query: 41 GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF 100
G D V Y +++ G+F +G ++ YNE + + + + V NS++ ALC
Sbjct: 6 GDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEML--DKRISPNVVTYNSIIAALCKAQTV 63
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
D+A+++ M P + ++N + G+C G+ K+AI +KM PD +
Sbjct: 64 DKAMEVLTTMVKSGVMPDCM-----TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVV 118
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD------ACFEVN------ 208
++N+L+D LCKNG EA +++ M+ +G+ PD TYG L+ A E++
Sbjct: 119 TYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLM 178
Query: 209 -----------------------RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+V++ F KM GL PN Y ++ L + G +
Sbjct: 179 VRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRV 238
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
++A +F+ M+ + L+ D Y ++ +L K ++ E+ +LD GI S
Sbjct: 239 EDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDR-GICLSTIFFNS 297
Query: 305 VKGELSKEGREEEVVKLMEKKER 327
+ KEGR E VKL + R
Sbjct: 298 IIDSHCKEGRVIESVKLFDLMVR 320
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 132/313 (42%), Gaps = 65/313 (20%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKL--------------------------- 40
D V YS ++ GF ++GD D + + E+ +K
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69
Query: 41 ------GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL 94
GV+ D + Y S++ G+ G +EA+ + + V+ V NS++D L
Sbjct: 70 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKM--RSDGVEPDVVTYNSLMDYL 127
Query: 95 CNNGKFDEALKLFDRMKNEHNPP------------------------------KRLAVNL 124
C NG+ EA K+FD M P + N
Sbjct: 128 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 187
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
F+++ Y Q + ++A+ VF KM + +P+ +++ +ID LCK+G + +A + +
Sbjct: 188 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQ 247
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M D+G+ PD Y L+ + ++ + F +M+D G+ + +N ++ + G
Sbjct: 248 MIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 307
Query: 245 LDEAKSFFDIMVK 257
+ E+ FD+MV+
Sbjct: 308 VIESVKLFDLMVR 320
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 9/230 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ LM ++G ++F+ + ++ G+ D YG+L++GY KG
Sbjct: 112 GVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKR--GLKPDITTYGTLLQGYATKGALV 169
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + V + + + + ++ A K +EA+ +F +M+ + P N
Sbjct: 170 EMHGLLDLMV--RNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNP-----NA 222
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + D C GR +DA+ F +M + PD++ +N+LI LC +AEEL+ E
Sbjct: 223 VTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLE 282
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
M D+G+ + ++D+ + RV + F MV G++P++ R
Sbjct: 283 MLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKPDIITLGR 332
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 154/327 (47%), Gaps = 49/327 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDS-DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
GFV D YS + +GF+ + + F LF+E+K GVV D Y L+ + G+
Sbjct: 484 GFVPDTSTYSEV-IGFLCNASRVENAFFLFKEMKGT--GVVPDVYTYTILIDCFSKAGII 540
Query: 64 EEAMECYNEAV--GENSSV-------------KMSAVAN------------------NSV 90
++A +E V G +V K +VAN ++
Sbjct: 541 KQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTAL 600
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPP---------KRLA--VNLGSFNVMADGYCGQGR 139
+D C +G ++A +++ RM+ + + P +A N+ ++ + DG C +
Sbjct: 601 IDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHK 660
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
KDA ++ M C P+T+ ++ LID CK L EA+E++ +M ++G NP+ YTY
Sbjct: 661 VKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSS 720
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
L+D F+ R+D KM+++ PN+ +Y ++ L +V DEA +M +K
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEI 285
K + +Y M+ GK+D+ LE+
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLEL 807
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 33/275 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG-------------------DSDGVFRLFEELKEKLG 41
M KG + + Y+ L+ G+ + G D D F++ + EK
Sbjct: 585 MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK-P 643
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
VV+ G + L K + +K + + + N+ + ++++D C K D
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNT------IVYDALIDGFCKAAKLD 697
Query: 102 EALKLFDRMKNE-HNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
EA ++F +M +NP N+ +++ + D R ++V KM E C+P+ +
Sbjct: 698 EAQEVFHKMVERGYNP------NVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIV 751
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+ +ID L K EA +L M +KG P+ TY ++D + +VD FR+M
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM 811
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
G PN Y L+ G LDEA + + M
Sbjct: 812 GSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 124/286 (43%), Gaps = 22/286 (7%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ +++ LFE + K G + + Y +L+ GY G E+A + Y
Sbjct: 560 VTYTTLIHAYLKAKKVSVANELFELMIAK--GCFPNVITYTALIDGYCKSGNIEKACQIY 617
Query: 71 NEAVGE--------------NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
G+ N + K + V +++D LC K +A L + M +
Sbjct: 618 ARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCE 677
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P + ++ + DG+C + +A EVF KM E +P+ ++++LID+L K+ L
Sbjct: 678 PNTIV-----YDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLD 732
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++ +M + P+ Y ++D +V + D+ M + G +PN+ Y ++
Sbjct: 733 LVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMI 792
Query: 237 GKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
+ G +D+ F M K + +Y ++ G LDE
Sbjct: 793 DGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDE 838
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 131/318 (41%), Gaps = 48/318 (15%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGK 99
G + +VY +L+ G+ +EA E +++ V G N +V +S++D L + +
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNV----YTYSSLIDRLFKDKR 730
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
D LK+ +M P N+ + M DG + +A ++ M E C P+
Sbjct: 731 LDLVLKVLSKMLENSCAP-----NIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 785
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG------ 213
+++ +ID K G + + EL+ EM KG P+ TY +L++ C +D+
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845
Query: 214 --ATYFRKMVDS-------------------------GLRPNLAVYNRLVGKLVQVGMLD 246
TY+ K V S G P + +Y L+ V+ G L+
Sbjct: 846 MKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLE 905
Query: 247 EAKSFF-DIMVKKLKMDDAS--YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
A +++ + M Y ++ + S K+D E+ ++ DG I
Sbjct: 906 VALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVH 965
Query: 304 FVKGELSKEGREEEVVKL 321
+ G L + R EE ++L
Sbjct: 966 LLMG-LIRVRRWEEALQL 982
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 4/223 (1%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM--ADG 133
E K V N ++ ++C+ G+ + F+ + +N L NV+ A
Sbjct: 405 EKCECKPGYVVYNILIGSICSGGELPGPVT-FELAEKAYNEMLSAGTVLNKVNVVSFARC 463
Query: 134 YCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD 193
CG G+F+ A +V +M PDT +++ +I LC + A L+ EM GV PD
Sbjct: 464 LCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPD 523
Query: 194 EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
YTY +L+D + + + +MV G P + Y L+ ++ + A F+
Sbjct: 524 VYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 583
Query: 254 IMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+M+ K + +Y ++ G +++ +I + D I
Sbjct: 584 LMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADI 626
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 115/275 (41%), Gaps = 11/275 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELK--EKLGGVVSDGVVYGSLMKGYF 58
M +G +++ L+ + + D ++L ++++ E G V ++ GS+ G
Sbjct: 369 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 428
Query: 59 MKG--MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+ G E A + YNE + + + V S LC GKF++A K+ M
Sbjct: 429 LPGPVTFELAEKAYNEMLSAGTVLNKVNVV--SFARCLCGFGKFEKAYKVIHEMMGNGFV 486
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P + +++ + C R ++A +F++M PD ++ LID K G++
Sbjct: 487 P-----DTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIK 541
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A EM G P TY L+ A + +V F M+ G PN+ Y L+
Sbjct: 542 QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALI 601
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMK 271
+ G +++A + M + D F +K
Sbjct: 602 DGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIK 636
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
NV+ C G + A+E ++ ++ P +++N L+ + L A+ ++ EMS
Sbjct: 209 LNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS 268
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G++ DE+T G A +V + + + K PN +YN+++ L + +
Sbjct: 269 ELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFE 325
Query: 247 EAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
EA F + M + + +Y+ ++ + +L I+ ++ +G
Sbjct: 326 EAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEG 373
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 83/223 (37%), Gaps = 34/223 (15%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN------------------------ 123
N ++ C NG ++ AL+ R+K+ P R+ N
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269
Query: 124 LG------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
LG + A C G++++A+ + K P+T+ +N +I LC+ E
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDF---VPNTILYNKMISGLCEASFFEE 326
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A + M P+ TY +L+ C ++ M+ G P+ ++N LV
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386
Query: 238 KLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKL 279
+ A M K + K Y ++ ++ GG+L
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGEL 429
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 8/159 (5%)
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
ALC GK+ EAL L + K + P N +N M G C F++A++ +M
Sbjct: 285 ALCKVGKWREALSLIE--KEDFVP------NTILYNKMISGLCEASFFEEAMDFLNRMRS 336
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
C P+ ++ L+ L + + M +G P + L+ A + +
Sbjct: 337 TSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSY 396
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
+KM +P VYN L+G + G L +F
Sbjct: 397 AYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTF 435
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 138/284 (48%), Gaps = 10/284 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+ V + Y L+ G + G+ + +++ K GV + V++ +LM GY KGM
Sbjct: 322 RRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSK--GVDVNRVIFNTLMDGYCKKGMI 379
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA+ N + + ++ A N + C + + +EA +L M+ P N
Sbjct: 380 DEALRLQN--IMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAP-----N 432
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ SF+++ D YC + F +A +F+ M + +P +++N I++ CK G + EA +L
Sbjct: 433 VVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLIN 492
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM ++G+ PD YTY L+D VD F +M GL N+ Y ++ L + G
Sbjct: 493 EMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDG 552
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
DEA +D M K+ + DD Y ++ +L G L LE V
Sbjct: 553 RADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENV 596
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 143/329 (43%), Gaps = 46/329 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D +Y+ ++ + G+ F LF+E+ E+ +V + YG+L+ G
Sbjct: 284 MLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTER--RLVPNAYTYGALINGACKA 341
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A N+ ++ V ++ V N+++D C G DEAL+L + M+ K
Sbjct: 342 GEMKAAEMMVNDM--QSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQ-----KGF 394
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + N++A G+C R ++A + M E +P+ +SF+ LID CK AEA
Sbjct: 395 EIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARR 454
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M KG P TY ++ + ++++ +M + GL P+ Y L+
Sbjct: 455 LFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGER 514
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
G +D A F+ M + L + +Y I+ G
Sbjct: 515 ASGNVDRALELFNEMPQLGLNRNVVTYTV----------------IISG----------- 547
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKERE 328
LSK+GR +E KL ++ +E
Sbjct: 548 ---------LSKDGRADEAFKLYDEMNKE 567
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF D +L R G+ + ++ + G+ + +++ G KG
Sbjct: 147 KGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVD--SGIEIRVCSWTAVVDGLCKKGEV 204
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDA---LCNNGKFDEALKLFDRMKNEHNPPKRL 120
A +E V + K S + N++L+ + + G +E L L ++ ++N
Sbjct: 205 VRAKALMDELVCK--GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYN----- 257
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ ++ + Y + ++A ++F +M + PD + ++I+ CK G + A
Sbjct: 258 ---VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFV 314
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM+++ + P+ YTYG L++ + + M G+ N ++N L+
Sbjct: 315 LFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYC 374
Query: 241 QVGMLDEAKSFFDIMVKK 258
+ GM+DEA +IM +K
Sbjct: 375 KKGMIDEALRLQNIMQQK 392
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 152/322 (47%), Gaps = 10/322 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G P YS ++ G +DG + +FE + +K G ++ +Y +L+ Y G
Sbjct: 324 RGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKK--GCKANVAIYTALIDAYGKNGNV 381
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA+ + GE + V +++ LC +G+ DEA++ F+ K+ +AVN
Sbjct: 382 NEAINLFERMKGE--GFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNE-----VAVN 434
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ + DG GR +A + F +M E C D+ +N LID L K+G + EA L+
Sbjct: 435 AMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFK 494
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +G + YTY +L+ F+ +R ++ + M+D G+ P A + L L G
Sbjct: 495 RMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSG 554
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+ A D + + + +++ M+ L G+ ++ ++ GI+D G E ++
Sbjct: 555 KVARACKILDELAPMGVIPETAFEDMINVLCKAGRTEQACKLADGIVDRGR-EVPGRVRT 613
Query: 304 FVKGELSKEGREEEVVKLMEKK 325
+ L K G + +KLM K
Sbjct: 614 ILINALRKAGNADLAMKLMHSK 635
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 148/322 (45%), Gaps = 46/322 (14%)
Query: 9 DPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+P +Y++ L+ G V + R+FE ++ G + D V Y +++KGY G ++A
Sbjct: 222 EPSLYTFNFLLNGLVNSMFIESAERVFEVME--CGKIGPDVVSYNTMIKGYCKAGNTKKA 279
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
ME + + E +++ + +++ A + G FD L L+ M+ + L + +
Sbjct: 280 MEKFTDM--EKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEE-----RGLEIPPHA 332
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
++++ G C GR + VF M + C + + LID KNG + EA L+ M
Sbjct: 333 YSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMK 392
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+G PD+ TYG++++ + R+D+ YF D+ + N Y+ L+ L + G +D
Sbjct: 393 GEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVD 452
Query: 247 EAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
EA+ FF+ MV++ D+ + AL D
Sbjct: 453 EAEKFFEEMVERGCPQDS---YCYNALIDA------------------------------ 479
Query: 307 GELSKEGREEEVVKLMEKKERE 328
L+K G+ EE + L ++ E+E
Sbjct: 480 --LAKSGKMEEALVLFKRMEKE 499
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 10/261 (3%)
Query: 25 DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSA 84
D D V +F E KEK G + SL++ + GM EE + + + S ++ S
Sbjct: 170 DFDRVRCIFGEFKEK--GFLMTVFAANSLIRSFGALGMVEELLWVWRRM--KESGIEPSL 225
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
N +L+ L N+ + A ++F+ M+ ++ ++ S+N M GYC G K A+
Sbjct: 226 YTFNFLLNGLVNSMFIESAERVFEVMEC-----GKIGPDVVSYNTMIKGYCKAGNTKKAM 280
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
E F M + PD +++ LI G LY EM ++G+ + Y L++
Sbjct: 281 EKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGL 340
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDD 263
+ R +G++ F M G + N+A+Y L+ + G ++EA + F+ M + + DD
Sbjct: 341 CKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDD 400
Query: 264 ASYKFMMKALSDGGKLDEILE 284
+Y ++ L G+LDE +E
Sbjct: 401 VTYGVIVNGLCKSGRLDEAVE 421
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 2/171 (1%)
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
N+LI GM+ E ++ M + G+ P YT+ L++ ++ F M
Sbjct: 194 NSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMEC 253
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ P++ YN ++ + G +A + F D+ + L+ D +Y +++A G D
Sbjct: 254 GKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDS 313
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
L + +++ G+E V G L K+GR E + E ++ +A
Sbjct: 314 CLHLYQE-MEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKA 363
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL-SFNNLIDQLCKNGMLAE 177
+L+ N +F + +D +G+ A F G+ + + + +LID L +
Sbjct: 116 KLSPNFVAFVLKSDAI--RGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDR 173
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
++GE +KG + L+ + + V++ +R+M +SG+ P+L +N L+
Sbjct: 174 VRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLN 233
Query: 238 KLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILE 284
LV ++ A+ F++M K+ D SY M+K G + +E
Sbjct: 234 GLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAME 281
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + G+ V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A +LFD M + P N
Sbjct: 189 EGFRLKNXM--QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 8/251 (3%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
+F J E G +SD V+ L+ Y G +A+ECY + + ++ VJ
Sbjct: 51 VFAAJLETKGTQISDIYVFSGLITAYLESGFLRDAIECYR--LTKEHKFRVPFDTCRKVJ 108
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ L F ++ P +L FN++ + +G + A VF +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYP-----ASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
++ P +SFN L++ K G L E L M GV PD YTY +L++ + +++D
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
D F +M+D+GL PN + L+ + G +D A + M+ + L D +Y ++
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 271 KALSDGGKLDE 281
L G L +
Sbjct: 284 YGLCKKGDLKQ 294
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 101/252 (40%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMIXEAKTLIQIVVSRKGKGSASAVFAAJLETKGTQISD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +J+ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +LM + + + + F + GLRP++ +N L+ +++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE + M ++ D +Y ++ L K+D+ E+ +LD+G +
Sbjct: 186 DLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 9/284 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D ++ L+ G R G D F +F++++ G + D V Y +L+ G +
Sbjct: 176 PDTWTFNILIRGLCRVGGVDRAFEVFKDMES--FGCLPDVVTYNTLINGLCKANEVQRGC 233
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E + E + S V S++ C +GK EA LF+ M P N+ +F
Sbjct: 234 ELFKE-IQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQP-----NVITF 287
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
NV+ DG+ G +A ++RKM + CS D ++F +LID C+ G + + + M
Sbjct: 288 NVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKT 347
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+ V+P YTY +L++A + NR+++ + ++ +S + P +YN ++ + G +DE
Sbjct: 348 RNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDE 407
Query: 248 AKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
M K+ D ++ ++ G++ E + I +L
Sbjct: 408 GNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRML 451
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 124/257 (48%), Gaps = 20/257 (7%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA-MECYN 71
Y+ LM + G D V +F+ + SDG + S + G+ + M + + +
Sbjct: 76 YNLLMRSLCQMGHHDLVNIVFDYMG-------SDGHLPDSKLLGFLVTWMAQASDFDMVK 128
Query: 72 EAVGE--NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
+ + E V++++ N++L L + EA+ LF +PP + +FN+
Sbjct: 129 KLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPP-----DTWTFNI 183
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ G C G A EVF+ M + C PD +++N LI+ LCK + EL+ E+ +
Sbjct: 184 LIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRS 243
Query: 190 -VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+PD TY ++ + ++ + + F +M+ SG++PN+ +N L+ ++G + EA
Sbjct: 244 DCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEA 303
Query: 249 KSFFDIMVKKLKMDDAS 265
++ M +K+ D S
Sbjct: 304 EA----MYRKMAYFDCS 316
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 115/256 (44%), Gaps = 14/256 (5%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V Y+ ++ GF + G LFEE+ G+ + + + L+ G+ G EA
Sbjct: 247 PDIVTYTSIISGFCKSGKMKEASNLFEEMMR--SGIQPNVITFNVLIDGFGKIGNIAEAE 304
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
Y + + S V S++D C G+ + LK ++ MK + P + ++
Sbjct: 305 AMYRKMAYFDCSA--DVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSP-----TVYTY 357
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
V+ + C + R +A + ++ P +N +ID CK G + E + EM +
Sbjct: 358 AVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEE 417
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
K +PD+ T+ +L+ R+ + F +M+ + P+ N L+ L++ GM +E
Sbjct: 418 KRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNE 477
Query: 248 AKSFFDIMVKKLKMDD 263
A ++K+ ++D
Sbjct: 478 AYR-----IRKMALED 488
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 12/162 (7%)
Query: 103 ALKLFDRMKNEHNPP--------KRLAVNL----GSFNVMADGYCGQGRFKDAIEVFRKM 150
L F+ +K +NP RL +N+ ++N++ C G VF M
Sbjct: 40 PLIAFEVIKRFNNPKVGFKFLEFSRLNLNVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYM 99
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
G PD+ L+ + + ++L E+ K V + + Y L+ + N+V
Sbjct: 100 GSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQV 159
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+ F++ + P+ +N L+ L +VG +D A F
Sbjct: 160 HEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVF 201
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 139/283 (49%), Gaps = 11/283 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VA+ VY+ L+ + GD + +L E++EK GV D Y +L+ Y K M
Sbjct: 198 GVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK--GVFPDIFTYNTLISVYCKKSMHF 255
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ + E S V + V NS + G+ EA +LF +K++ + N
Sbjct: 256 EALSVQDRM--ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD------VTANH 307
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DGYC +A+ + M SP +++N+++ +LC++G + EA L E
Sbjct: 308 VTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS K + PD T L++A ++ + +KM++SGL+ ++ Y L+ +V
Sbjct: 368 MSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLE 427
Query: 245 LDEAK-SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
L+ AK F ++ K A+Y +++ + K DEI +++
Sbjct: 428 LENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLL 470
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 11/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ + GF R+G RLF E+K+ V ++ V Y +L+ GY +
Sbjct: 268 GVAPNIVTYNSFIHGFSREGRMREATRLFREIKD---DVTANHVTYTTLIDGYCRMNDID 324
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ V E+ V NS+L LC +G+ EA +L M + P + N
Sbjct: 325 EALRL--REVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCN- 381
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ + YC A++V +KM E D S+ LI CK L A+E
Sbjct: 382 ----TLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFS 437
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +KG +P TY L+D + N+ D+ + GL ++A+Y L+ ++ ++
Sbjct: 438 MIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQ 497
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+D AK F+ M KK L D + M A GK+ E
Sbjct: 498 VDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTE 535
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 32/247 (12%)
Query: 98 GKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI-EVFRKMGEYRCS 156
G ++++ +F+++++ P +L + V+ + Q R D + ++F+KM +
Sbjct: 147 GMINDSIVVFEQIRSCGLKP-----HLQACTVLLNSLVKQ-RLTDTVWKIFKKMVKLGVV 200
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-C-----FEVNRV 210
+ +N L+ K+G +AE+L EM +KGV PD +TY L+ C FE V
Sbjct: 201 ANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSV 260
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM- 269
D +M SG+ PN+ YN + + G + EA F + + + +Y +
Sbjct: 261 QD------RMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLI 314
Query: 270 -----MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
M + + +L E++E G G + ++ L+ +L ++GR E +L+ +
Sbjct: 315 DGYCRMNDIDEALRLREVMESRG--FSPGVVTYNSILR-----KLCEDGRIREANRLLTE 367
Query: 325 KEREKAE 331
+K E
Sbjct: 368 MSGKKIE 374
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 1/167 (0%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G D+I VF ++ P + L++ L K + +++ +M
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
GV + + Y +L+ AC + + +M + G+ P++ YN L+ + M
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
EA S D M + + + +Y + S G++ E + I DD
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD 302
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 100/263 (38%), Gaps = 44/263 (16%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
A+ V Y+ L+ G+ R D D RL E ++ + G V Y S+++ G EA
Sbjct: 305 ANHVTYTTLIDGYCRMNDIDEALRLREVMESR--GFSPGVVTYNSILRKLCEDGRIREAN 362
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E G+ ++ + N++++A C A+K+ +M L +++ S+
Sbjct: 363 RLLTEMSGKK--IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESG-----LKLDMYSY 415
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSP------------------------------ 157
+ G+C ++A E M E SP
Sbjct: 416 KALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEK 475
Query: 158 -----DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
D + LI ++CK + A+ L+ M KG+ D + + A + +V +
Sbjct: 476 RGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTE 535
Query: 213 GATYFRKMVDSGLRPNLAVYNRL 235
+ F M + L NL +Y +
Sbjct: 536 ASALFDVMYNRRLMVNLKLYKSI 558
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 12/155 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF YS+L+ GF D + +L EE +++ G+ +D +Y L++ K
Sbjct: 438 MIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKR--GLCADVALYRGLIRR-ICK 494
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ + + E++ E + +V ++ A GK EA LFD M N +RL
Sbjct: 495 LEQVDYAKVLFESM-EKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYN-----RRL 548
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
VNL + ++ Y G D + F RC
Sbjct: 549 MVNLKLYKSISASYAGDN---DVLRFFWSHVGDRC 580
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 4/168 (2%)
Query: 157 PDTLS--FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
P+ +S F+ L+ K GM+ ++ ++ ++ G+ P +L+++ + D
Sbjct: 129 PEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVW 188
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKAL 273
F+KMV G+ N+ VYN LV + G ++A+ M +K D +Y ++
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
E L + + G F+ G S+EGR E +L
Sbjct: 249 CKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHG-FSREGRMREATRL 295
>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
Length = 1031
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 134/280 (47%), Gaps = 11/280 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + V+Y+ L+ F + G + + F ++ G+V++ V++ +L+ ++ +GM
Sbjct: 454 GVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYR--SGLVANSVIHNALLCSFYREGMIA 511
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA E + + + + + N ++D+ C G EA ++D M PP ++
Sbjct: 512 EA-EQFKQYMSR-MKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPP-----DI 564
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G C G A E + E C+ D + N L+ +CK+G L EA +L +
Sbjct: 565 CTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEK 624
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + + PD YTY +L+D + ++ + M++ GL P+ Y L+ LV G
Sbjct: 625 MVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQ 684
Query: 245 LDEAKSFFDIMVKK--LKMDDASYKFMMKALSDGGKLDEI 282
+ A F ++ K L D +Y MM GG+++EI
Sbjct: 685 VKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEI 724
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 128/290 (44%), Gaps = 25/290 (8%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G AD Y+ ++ + S + L + ++E + D Y +L+ G+F +G
Sbjct: 294 GIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREV--NLTPDECSYNTLIHGFFGEGKIN 351
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ +N+ + + S+K S +++D C NG+ DEA ++ M+ P+ ++
Sbjct: 352 LAIYIFNQMLRQ--SLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVS--- 406
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
A ++ + M PD ++++ LI+ +CK GM+ E +E+
Sbjct: 407 -----------------KAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSR 449
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M GV P+ Y L+ + + YF + SGL N ++N L+ + GM
Sbjct: 450 MQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGM 509
Query: 245 LDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ EA+ F M + K+ D AS+ ++ + G + E + ++ G
Sbjct: 510 IAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHG 559
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N VL++LC GK +A + +MKN P N ++N + + Y +GR K A+ +
Sbjct: 234 NIVLNSLCTQGKLSKAESMLQKMKNCRLP------NAVTYNTILNWYVKKGRCKSALRIL 287
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M + D ++N +ID+LCK A A L M + + PDE +Y L+ F
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-FFDIMVKKLKMDDAS- 265
+++ F +M+ L+P++A Y L+ + G DEA+ +++ + ++ + S
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSK 407
Query: 266 YKFMMKA-LSDGGKLDEIL--EIVGGILDDGGIEFSEEL 301
K ++K L+DG D I ++ G+ G I ++E+
Sbjct: 408 AKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEI 446
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 11/278 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V D + Y+ L+ G V +G +F+E+ K G+ +D + Y S+M GY +K
Sbjct: 660 MLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICK-EGLYADCIAYNSMMNGY-LK 717
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + +E + EN V S+ + N ++ G+ L L+ M E P +
Sbjct: 718 GGQINEIERLMRNMHEN-EVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNV 776
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMG--EYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L F G C G + A++ KM E P + LI+ C+ G + A
Sbjct: 777 TYRLLIF-----GLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGA 831
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EL +M GV P E ++ + +V++ F ++ +G+ P +A + L+
Sbjct: 832 FELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHG 891
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSD 275
L + +D+A +M LK+D +Y ++ L +
Sbjct: 892 LCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCN 929
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 136/314 (43%), Gaps = 12/314 (3%)
Query: 16 LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVG 75
L++G + G D L E++ + ++ D Y L+ G+ +G A+ + +
Sbjct: 605 LLVGICKHGTLDEALDLCEKMVTR--NILPDTYTYTILLDGFCKRGKIVPALILL-QMML 661
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E V +A +L+ L N G+ A +F + + L + ++N M +GY
Sbjct: 662 EKGLVP-DTIAYTCLLNGLVNEGQVKAASYMFQEIICKEG----LYADCIAYNSMMNGYL 716
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
G+ + + R M E P + S+N L+ K G L+ LY +M +G+ PD
Sbjct: 717 KGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNV 776
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMV--DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF- 252
TY LL+ E ++ + KMV +SGL+P Y L+ +VG +D A
Sbjct: 777 TYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKE 836
Query: 253 DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE 312
D+ + + + +++ L GK++E + + I+ G + + G L KE
Sbjct: 837 DMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHG-LCKE 895
Query: 313 GREEEVVKLMEKKE 326
+ ++ L + E
Sbjct: 896 FKIDDAFHLKQLME 909
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 7/240 (2%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ LM G+++ G L+ ++ ++ G+ D V Y L+ G G+ E A++ +
Sbjct: 743 YNILMHGYIKKGQLSRTLYLYRDMVKE--GIKPDNVTYRLLIFGLCEYGLIEIAVKFLEK 800
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
V E S ++ ++++A C G D A +L + MK P +A + +
Sbjct: 801 MVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAES-----SIVR 855
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G C G+ ++AI VF + P +F L+ LCK + +A L M G+
Sbjct: 856 GLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKV 915
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
D TY +L+ + D + +M GL PN+ Y L G + G + + +
Sbjct: 916 DVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLL 975
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 97/202 (48%), Gaps = 7/202 (3%)
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRF 140
K S + N++L+AL K E + LF + + ++ +++ + N++ + C QG+
Sbjct: 192 KASLFSCNNILNALVGINK-SEYVWLFLK----ESLDRKFPLDVTTCNIVLNSLCTQGKL 246
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
A + +KM R P+ +++N +++ K G A + +M G+ D YTY ++
Sbjct: 247 SKAESMLQKMKNCR-LPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIM 305
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-L 259
+D ++ R ++M + L P+ YN L+ G ++ A F+ M+++ L
Sbjct: 306 IDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSL 365
Query: 260 KMDDASYKFMMKALSDGGKLDE 281
K A+Y ++ G+ DE
Sbjct: 366 KPSVATYTALIDGYCRNGRTDE 387
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 146/324 (45%), Gaps = 15/324 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + D V +S L+ R+G F E++ G+V D V+Y L+ G+ G
Sbjct: 391 RGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER--SGIVPDNVIYTILIDGFCRNGAL 448
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A++ +E + M V N+ L+ LC F +A LF+ M P +
Sbjct: 449 SDALKMRDEMLARGCF--MDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVP-----D 501
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+F + GYC G A+ +F M PD +++N LID CK G + A+EL+
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M K + PD +YG +++ + + +M++ G+RPNL N L+ + G
Sbjct: 562 DMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG 621
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILE---IVGGILDDGGIEFSEE 300
+ +A + M+ + D+ F L DG + LE I+ ++ G++F+
Sbjct: 622 DMPKAYEYLSKMISNGIIPDS---FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678
Query: 301 LQEFVKGELSKEGREEEVVKLMEK 324
+ EG+ +E +++ K
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRK 702
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 124/258 (48%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D ++ L+ G+ +DG+ D LFE + + D V Y +L+ G+
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT--NLKPDKVTYNTLIDGFCKA 550
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A E +++ + ++ + ++ +VL+ C++G EAL L D+M + P
Sbjct: 551 GEMGRAKELWDDMIRKD--IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP--- 605
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL + N + GYC G A E KM PD+ S+N LID K L +A
Sbjct: 606 --NLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFI 663
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM +G+ + TY L+++ ++ + RKM++ G+ P+ A Y+ L+ V
Sbjct: 664 LINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHV 723
Query: 241 QVGMLDEAKSFFDIMVKK 258
+ EA F D M+++
Sbjct: 724 SQDNMKEAFRFHDEMLQR 741
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 139/324 (42%), Gaps = 41/324 (12%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE------------------KLG---- 41
KG AD V Y+ L+ + R+G + F+L K+G
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345
Query: 42 -----------GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
G+ + Y +L+ + EA E ++E V V+ +S+
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM--SRRGVLPDLVSFSSL 403
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ L NG +AL F M+ P + + ++ DG+C G DA+++ +M
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVI-----YTILIDGFCRNGALSDALKMRDEM 458
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
C D +++N ++ LCK M A+A+ L+ EM ++G+ PD YT+ L+ + +
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
D F MV + L+P+ YN L+ + G + AK +D M++K + D SY +
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578
Query: 270 MKALSDGGKLDEILEIVGGILDDG 293
+ G L E L + +L+ G
Sbjct: 579 LNGFCSSGLLPEALNLCDQMLEKG 602
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 135/309 (43%), Gaps = 15/309 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D +V +Y+ +R+G F+ L+ K GV L+ G G +
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEA-----FQILRRK--GVSVSINACNKLLGGLVRTGWVD 239
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A E Y E V ++++ N +++ALC + KF+ + M+ K + ++
Sbjct: 240 LAWEIYGEVV--RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG-----KGVFADI 292
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + + YC +G ++A ++ P L++N ++ LCK G A+++ E
Sbjct: 293 VTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIE 352
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G+ P+ TY L+ + + + F +M G+ P+L ++ L+G L + G
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L +A F M + + D+ Y ++ G L + L++ +L G
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472
Query: 304 FVKGELSKE 312
F+ G K+
Sbjct: 473 FLNGLCKKK 481
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 8/240 (3%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
S G++Y L++ Y E E + + V +S A N +L L G D A
Sbjct: 185 SVGLIYDLLVRTYVQAKKLREGSEAFQ--ILRRKGVSVSINACNKLLGGLVRTGWVDLAW 242
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
+++ + + +N+ + N+M + C +F++ + M D +++N
Sbjct: 243 EIYGEVVRGG-----IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNT 297
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
LI+ C+ G++ EA +L S +G+ P TY ++ ++ + D +M+ G
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEIL 283
L PN A YN L+ ++ + + EA+ FD M ++ + D S+ ++ L+ G L + L
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQAL 417
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 98/194 (50%), Gaps = 9/194 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + D + Y ++ GF G L +++ EK G+ + V +L+KGY
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK--GIRPNLVTCNTLIKGYCRS 620
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A E ++ + ++ + + + N+++D ++A L + M+ + L
Sbjct: 621 GDMPKAYEYLSKMI--SNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK-----RGL 673
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N++ +G+C +G+ ++A +V RKM E +PD ++++LI+ + EA
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFR 733
Query: 181 LYGEMSDKGVNPDE 194
+ EM +G+ PD+
Sbjct: 734 FHDEMLQRGLVPDD 747
>gi|226492629|ref|NP_001143148.1| uncharacterized protein LOC100275629 [Zea mays]
gi|195615066|gb|ACG29363.1| hypothetical protein [Zea mays]
Length = 478
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 150/327 (45%), Gaps = 24/327 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDS--DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF 58
M GF Y+ L+ D + + RLF + + D Y +++ G
Sbjct: 155 MRAAGFAPTAATYNVLLKAHCSDAAAHIEDALRLFRNIPKP------DVCSYNTIIDGLC 208
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+G EA++ ++E VG+ + + V +V+ L G FD+ALK+F M P
Sbjct: 209 RRGRLAEALDMFSEMVGK--CIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSP- 265
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
NL +++ + DG C GR A+E+ +M + + P+T++++++ID LCK ML+EA
Sbjct: 266 ----NLVTYSSLIDGLCKGGRATSALELLDRMVKEKKLPNTITYSSVIDGLCKEHMLSEA 321
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY------ 232
E+ M +G PD +G L+ + R + A Y +MV +G+ PN +
Sbjct: 322 MEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNRVTWSLHARI 381
Query: 233 -NRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
N ++ L G L A + + + + D ++ ++++ S +++ +V +L
Sbjct: 382 NNTVLTALCDKGELGRAFQVYQSTRTRSISTDPTTFHLLVESFSKNN-IEKAARVVLDML 440
Query: 291 DDGGIEFSEELQEFVKGELSKEGREEE 317
+ I E + G SK+ +E
Sbjct: 441 SERCIPERETWDAIISGYWSKKKVRQE 467
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 9/191 (4%)
Query: 143 AIEVFRKMGEYRCSPDTL-SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
A+ +FR P + S+N ++ L + L A L +M G P TY +L+
Sbjct: 112 ALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVLL 171
Query: 202 DA-CFE-VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
A C + ++D FR + +P++ YN ++ L + G L EA F MV K
Sbjct: 172 KAHCSDAAAHIEDALRLFRNIP----KPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKC 227
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
+ +Y ++ L+ G D+ L+I + G + G L K GR
Sbjct: 228 IAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDG-LCKGGRATSA 286
Query: 319 VKLMEKKEREK 329
++L+++ +EK
Sbjct: 287 LELLDRMVKEK 297
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 156/338 (46%), Gaps = 29/338 (8%)
Query: 11 VVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
+V+S LM + G D+ FRL + ++ S G ++ LMK + A
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIP-FHSCGYLFDRLMK----LNLTSPAW 210
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
Y E + + N ++ LC K +EA LF + + L + SF
Sbjct: 211 AFYEEIL--DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGK-----RGLRPTVVSF 263
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + +GYC G + R M E R PD +++ LI+ LCK G L +A +L+ EM D
Sbjct: 264 NTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCD 323
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G+ P++ T+ L++ R D G +++M+ G++P++ YN L+ L +VG L E
Sbjct: 324 RGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLRE 383
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEELQ 302
AK M ++ LK D +Y ++ G L+ LEI ++ +G + F+ +
Sbjct: 384 AKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALIS 443
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAA 340
F RE +V++ E+ RE EA + +A
Sbjct: 444 GFC--------REGQVIE-AERTLREMLEAGIKPDDAT 472
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 146/313 (46%), Gaps = 18/313 (5%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D YS L+ G ++G D +LF E+ ++ G+V + V + +L+ G+ + G + M
Sbjct: 293 PDVFTYSVLINGLCKEGQLDDANKLFLEMCDR--GLVPNDVTFTTLINGHCVTGRADLGM 350
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E Y + + VK + N++++ LC G EA KL M P + ++
Sbjct: 351 EIYQQML--RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKF-----TY 403
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
++ DG C +G + A+E+ ++M + D ++F LI C+ G + EAE EM +
Sbjct: 404 TMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLE 463
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G+ PD+ TY +++ + V G ++M G P + YN L+ L + G +
Sbjct: 464 AGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKN 523
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEI--LEIVGGILDDGGIEFSEELQEF 304
A D M+ + DD +Y +++ G ++ L+ G++ D G S
Sbjct: 524 ANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSEKGLVQDYGSYTS------ 577
Query: 305 VKGELSKEGREEE 317
+ G+L K +E +
Sbjct: 578 LIGDLRKTCKERQ 590
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 21/148 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V ++ L+ GF R+G R E+ E G+ D Y ++ G+ K
Sbjct: 426 MVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLE--AGIKPDDATYTMVIHGFCKK 483
Query: 61 GMEEEA------MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH 114
G + M+C G V N +L+ LC G+ A L D M N
Sbjct: 484 GDVKTGFKLLKEMQCDGHVPG--------VVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKD 142
P + ++N++ +G+C G +D
Sbjct: 536 VVPDDI-----TYNILLEGHCKHGNRED 558
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 152/354 (42%), Gaps = 46/354 (12%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF D Y+ L+ G + G + + + + LGG+ D Y SL+ G G
Sbjct: 302 EGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML--LGGLDPDIYTYNSLISGLCKLGEI 359
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEA-------------------- 103
EEA++ ++ V + S +AV N+++ +LC + DEA
Sbjct: 360 EEAVKILDQMVSRDCSP--NAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFN 417
Query: 104 ---------------LKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
+ LF+ MK + P ++N++ D C + ++A+ + +
Sbjct: 418 SLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEF-----TYNMLIDSLCSSRKLEEALNLLK 472
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+M C+ + + +N LID CKN + EAEE++ EM +GV+ D TY L+D +
Sbjct: 473 EMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSK 532
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
RV+D A +M+ GLRP+ YN L+ + G + +A M D +Y
Sbjct: 533 RVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYA 592
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
++ L G++ ++ I G + ++ L K R E ++L
Sbjct: 593 TLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQA-LFKRNRTHEAMRL 645
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 156/346 (45%), Gaps = 46/346 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D ++ +M G++ G+ DG R+ E++ E G V L+ G+ +G +
Sbjct: 233 GLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEY--GCPCTDVTVNVLINGFCKQGRID 290
Query: 65 EAMECYNEAVGE-------------NSSVKMSAVAN--------------------NSVL 91
+A+ EAV E N K+ + NS++
Sbjct: 291 QALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLI 350
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
LC G+ +EA+K+ D+M + P N ++N + C + R +A E+ R +
Sbjct: 351 SGLCKLGEIEEAVKILDQMVSRDCSP-----NAVTYNAIISSLCKENRVDEATEIARLLT 405
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
PD +FN+LI LC + A +L+ EM KG PDE+TY +L+D+ +++
Sbjct: 406 SKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLE 465
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMM 270
+ ++M +G N+ +YN L+ + ++EA+ FD M ++ + D +Y ++
Sbjct: 466 EALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLI 525
Query: 271 KALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVK-GELSK 311
L ++++ +++ ++ +G ++ L F K G++ K
Sbjct: 526 DGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKK 571
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 136/298 (45%), Gaps = 12/298 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + D ++ L+ G + LFEE+K K G D Y L+
Sbjct: 407 KGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGK--GCRPDEFTYNMLIDSLCSSRKL 464
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EEA+ E E + + V N+++D C N + +EA ++FD M E R +V
Sbjct: 465 EEALNLLKEM--ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM--ELQGVSRDSV- 519
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + DG C R +DA ++ +M PD ++N+L+ CK G + +A ++
Sbjct: 520 --TYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQ 577
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M+ G NPD TY L+ + RV + R + G+ YN ++ L +
Sbjct: 578 TMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRN 637
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSD-GGKLDEILEIVGGILDDGGI-EFS 298
EA F M+ K + DA +YK + + L + GG + E ++ +++ G I EFS
Sbjct: 638 RTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFS 695
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N ++ ALC + A+ + + M P L+ + +F + GY G A+ +
Sbjct: 207 NILIKALCKAHQVRPAILMMEEM-----PSYGLSPDETTFTTIMQGYIEGGNLDGALRIK 261
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M EY C ++ N LI+ CK G + +A E +G PD++TY L++ ++
Sbjct: 262 EQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKI 321
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
M+ GL P++ YN L+ L ++G ++EA D MV + + +Y
Sbjct: 322 GHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTY 381
Query: 267 KFMMKALSDGGKLDEILEIV-----GGILDD 292
++ +L ++DE EI GIL D
Sbjct: 382 NAIISSLCKENRVDEATEIARLLTSKGILPD 412
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 135/311 (43%), Gaps = 48/311 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G + V+Y+ L+ GF ++ + +F+E+ +L GV D V Y
Sbjct: 474 MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM--ELQGVSRDSVTY---------- 521
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
N+++D LC + + ++A +L D+M E P +
Sbjct: 522 ---------------------------NTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKF 554
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + +C G K A ++ + M C+PD +++ LI LCK G + A
Sbjct: 555 -----TYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASR 609
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L + KG+ + Y ++ A F+ NR + FR+M+D P+ Y + L
Sbjct: 610 LLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLC 669
Query: 241 Q-VGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
G + EA F M+++ + + +S+ + + L D ++++V I++ +FS
Sbjct: 670 NGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKA--KFS 727
Query: 299 EELQEFVKGEL 309
E ++G L
Sbjct: 728 EREISTIRGFL 738
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 131/291 (45%), Gaps = 27/291 (9%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
FV VY ++ + G + + R+ EE+K L G D +G F+ +E
Sbjct: 93 FVPSSSVYEEILRKLGKAGSFEYMRRVLEEMK--LSGCEFD--------RGIFLIFVESY 142
Query: 66 A-MECYNEAVG------ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP-- 116
E Y+E VG + +K N +L+ L + K LKL +++ H+
Sbjct: 143 GKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANK----LKL---VESAHSSMV 195
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
+R+ ++ +FN++ C + + AI + +M Y SPD +F ++ + G L
Sbjct: 196 RRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLD 255
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
A + +M + G + T +L++ + R+D ++ ++ V G RP+ YN LV
Sbjct: 256 GALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLV 315
Query: 237 GKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIV 286
L ++G A D M+ L D +Y ++ L G+++E ++I+
Sbjct: 316 NGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKIL 366
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 152/324 (46%), Gaps = 20/324 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GF + Y+ L+ GF G D +L+ + ++ GVV + + +L+ G+F
Sbjct: 366 MVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKR--GVVPNEISCSTLLDGFFKA 423
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A+ + E + + + V N+V++ LC N + EA +LF RMK P L
Sbjct: 424 GKTEQALNLWKETLAR--GLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSL 481
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DGYC G A ++ +M P FN+ I L + +
Sbjct: 482 -----TYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVND 536
Query: 181 LYGEMSDKGVNPDEYTYG-LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ EMS KG++P+ TYG L+ C E N D YF +MV+ GL+PNL + + LV
Sbjct: 537 IRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYF-EMVEKGLKPNLFICSVLVSCF 595
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G +DEA +++++KL D L + GK+ I+E + G G + ++
Sbjct: 596 YREGKVDEA----NLVLQKLADTDMIQDCSASTL-NIGKVAHIIESLAG----GNHQSAK 646
Query: 300 ELQEFVKGELSKEGREEEVVKLME 323
+ V L K GR + L E
Sbjct: 647 IMWNIVILGLCKLGRVADARNLFE 670
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 13/308 (4%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
VKG + V Y+ L+ G+ ++G + ++ +E+KE +V D V YG+L+ GY +G
Sbjct: 227 VKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKEN-EKIVIDEVAYGALINGYCQRGR 285
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
E+A +E + ++ V+++ N++++ C G+ E KL NE+ V
Sbjct: 286 MEDANRVRDEMI--DAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQ--ANEYR-----GV 336
Query: 123 NLG--SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL S+N + DGYC +G A E M + TL++N L++ C G + +A +
Sbjct: 337 NLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALK 396
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M +GV P+E + L+D F+ + + +++ + GL N+ N ++ L
Sbjct: 397 LWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLC 456
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ + EA+ F M + D +Y+ ++ G L +I + + G + E
Sbjct: 457 KNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVE 516
Query: 300 ELQEFVKG 307
F+ G
Sbjct: 517 MFNSFITG 524
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 153/360 (42%), Gaps = 43/360 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y L+ G+ ++G+ L+ E+ EK G+ + + L+ ++ +
Sbjct: 541 MSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEK--GLKPNLFICSVLVSCFYRE 598
Query: 61 GMEEEA-------------MECYNEAV--------------GENSSVKMSAVANNSVLDA 93
G +EA +C + G + S K + N V+
Sbjct: 599 GKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAK---IMWNIVILG 655
Query: 94 LCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
LC G+ +A LF+ +K + P +++ + G G A + +M
Sbjct: 656 LCKLGRVADARNLFEDLKVKGFIPDNF-----TYSSLIHGCSASGSIDLAFGLRDEMLSA 710
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
R +P+ +++N+LI LCK+ ++ A L+ ++ KG++P+ TY L+D + +
Sbjct: 711 RLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEA 770
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKA 272
+KM+ G++P + Y L+ L G ++EA D M++ + + +Y +++
Sbjct: 771 FKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQG 830
Query: 273 LSDGGKLDEILEI-----VGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+ G + I ++ + G+L ++ + V + G E K++ K R
Sbjct: 831 YARCGNMKAITKLYNEMHICGLLPANWTGHVKQAEPVVNSKNLSVGHVEPDCKIIRIKNR 890
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 1/201 (0%)
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
K + + SF+++ + G+ KDA+ VF +MG+ S N L++QL + G +
Sbjct: 88 KDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGT 147
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A ++ +M G PD++T ++ A RV A + ++M + GL NL Y+ ++
Sbjct: 148 AVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMD 207
Query: 238 KLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
++G + A+ + VK L + +Y ++K G+++E ++V I ++ I
Sbjct: 208 GYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIV 267
Query: 297 FSEELQEFVKGELSKEGREEE 317
E + + GR E+
Sbjct: 268 IDEVAYGALINGYCQRGRMED 288
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + D VVY+ L+ GF + GD + F E+ + + D + Y +++ G+
Sbjct: 785 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR--DITPDVLTYTAIISGFCQI 842
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + ++E + ++ +V +++ C G +A ++ + M P
Sbjct: 843 GDMVEAGKLFHEMFCKG--LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP--- 897
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + DG C +G A E+ +M + P+ ++N++++ LCK+G + EA +
Sbjct: 898 --NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 955
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L GE G+N D TY LMDA + +D ++M+ GL+P + +N L+
Sbjct: 956 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 1015
Query: 241 QVGMLDEAKSFFDIMVKK 258
GML++ + + M+ K
Sbjct: 1016 LHGMLEDGEKLLNWMLAK 1033
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 136/293 (46%), Gaps = 10/293 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y+ L+ G ++GD D L E+ + G+ + Y S++ G
Sbjct: 890 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI--GLQPNIFTYNSIVNGLCKS 947
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA++ E E + + V +++DA C +G+ D+A ++ M K L
Sbjct: 948 GNIEEAVKLVGEF--EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-----KGL 1000
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +FNV+ +G+C G +D ++ M +P+ +FN+L+ Q C L A
Sbjct: 1001 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 1060
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+Y +M +GV PD TY L+ + + + F++M G +++ Y+ L+ +
Sbjct: 1061 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 1120
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
+ EA+ FD M ++ L D + F G + D I++ + I+++
Sbjct: 1121 KRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 1173
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 7/240 (2%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
++ ++V++ C G+ D+ KL + MK K L N + + C + +A
Sbjct: 724 VISYSTVVNGYCRFGELDKVWKLIEVMKR-----KGLKPNSYIYGSIIGLLCRICKLAEA 778
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
E F +M PDT+ + LID CK G + A + + EM + + PD TY ++
Sbjct: 779 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 838
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
++ + + F +M GL P+ + L+ + G + +A + M++ +
Sbjct: 839 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 898
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+Y ++ L G LD E++ + G V G L K G EE VKL+
Sbjct: 899 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG-LCKSGNIEEAVKLV 957
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 89/193 (46%), Gaps = 5/193 (2%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ N+ S+N++ C GR K+A + M +PD +S++ +++ C+ G L +
Sbjct: 685 VCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 744
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L M KG+ P+ Y YG ++ + ++ + F +M+ G+ P+ VY L+
Sbjct: 745 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 804
Query: 240 VQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE----ILEIVGGILDDGG 294
+ G + A FF ++ + + D +Y ++ G + E E+ L+
Sbjct: 805 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 864
Query: 295 IEFSEELQEFVKG 307
+ F+E + + K
Sbjct: 865 VTFTELINGYCKA 877
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 14/179 (7%)
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM-----ADGYCGQGRFKDAIE 145
L + G EA ++F++M N L +++ S NV D Y + AI
Sbjct: 625 FQVLVDFGLLREARRVFEKMLNYG-----LVLSVDSCNVYLTRLSKDCY----KTATAII 675
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
VFR+ E + S+N +I +C+ G + EA L M KG PD +Y +++
Sbjct: 676 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA 264
+D M GL+PN +Y ++G L ++ L EA+ F M+++ + D
Sbjct: 736 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 794
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 156/338 (46%), Gaps = 29/338 (8%)
Query: 11 VVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
+V+S LM + G D+ FRL + ++ S G ++ LMK + A
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIP-FHSCGYLFDRLMK----LNLTSPAW 210
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
Y E + + N ++ LC K +EA LF + + L + SF
Sbjct: 211 AFYEEIL--DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGK-----RGLRPTVVSF 263
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + +GYC G + R M E R PD +++ LI+ LCK G L +A +L+ EM D
Sbjct: 264 NTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCD 323
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G+ P++ T+ L++ R D G +++M+ G++P++ YN L+ L +VG L E
Sbjct: 324 RGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLRE 383
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEELQ 302
AK M ++ LK D +Y ++ G L+ LEI ++ +G + F+ +
Sbjct: 384 AKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALIS 443
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAA 340
F RE +V++ E+ RE EA + +A
Sbjct: 444 GFC--------REGQVIE-AERTLREMLEAGIKPDDAT 472
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 130/275 (47%), Gaps = 14/275 (5%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D YS L+ G ++G D +LF E+ ++ G+V + V + +L+ G+ + G + M
Sbjct: 293 PDVFTYSVLINGLCKEGQLDDANKLFLEMCDR--GLVPNDVTFTTLINGHCVTGRADLGM 350
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E Y + + VK + N++++ LC G EA KL M P + ++
Sbjct: 351 EIYQQML--RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKF-----TY 403
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
++ DG C +G + A+E+ ++M + D ++F LI C+ G + EAE EM +
Sbjct: 404 TMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLE 463
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G+ PD+ TY +++ + V G ++M G P + YN L+ L + G +
Sbjct: 464 AGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKN 523
Query: 248 AKSFFDIMVKK-LKMDDASYKFM----MKALSDGG 277
A D M+ + DD +Y + ++A GG
Sbjct: 524 ANMLLDAMLNLGVVPDDITYNILLERTLQAWKQGG 558
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 140/291 (48%), Gaps = 10/291 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K + V Y+ L+ G + + + ++ L E+ G+ +D YG L+ G G
Sbjct: 353 KNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHER--GLKADSTTYGLLINGLCKNGYL 410
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A+ EA EN + A +S++ LC G ++A++L +MK R +N
Sbjct: 411 NKALRILEEA--ENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKN-----RRKLN 463
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
FN + +GY + ++AI V R+M C+P +S+N +I+ LCK ++A
Sbjct: 464 SHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLK 523
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM ++G+ PD TY LL+D +VD + + ++ L+P+L ++N ++ L
Sbjct: 524 EMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQ 583
Query: 244 MLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+D A F M + + D ++ +M+ L G E L+I IL+ G
Sbjct: 584 KVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAG 634
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 126/244 (51%), Gaps = 7/244 (2%)
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
++++AL +G +A++LFD M P ++ +N++ DG+ +G F A E+++
Sbjct: 189 TLINALAKSGNLLDAVELFDEMSVRGVNP-----DVMCYNILIDGFLRKGDFVKANEIWK 243
Query: 149 KM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
++ E P ++N +I+ LCK G L E+ E++ M +PD +T+ ++ +
Sbjct: 244 RLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKA 303
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
+ F++M++SGL P++ YN ++ L + G L++ +++M K + SY
Sbjct: 304 GNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYN 363
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+++ L D K+++ + +L + G++ + L K G + ++++E+ E
Sbjct: 364 MLIQGLLDNKKVEQAI-CYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAEN 422
Query: 328 EKAE 331
E A+
Sbjct: 423 EGAD 426
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 139/294 (47%), Gaps = 16/294 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ P V+ +++ + V R+ + ++ + D V S +K Y M +
Sbjct: 38 GYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQRCTCSED--VALSAIKAYAKCSMPD 95
Query: 65 EAMECYNEAV---GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
+A+ + V G N ++ + NS+L+A + ++ EA F + P
Sbjct: 96 QALNLFQNMVDIFGCNPGIR----SFNSMLNAFIESNQWREAELFFTYFQTAGMSP---- 147
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
NL ++N++ C + +F+ + M E +PD LS+ LI+ L K+G L +A EL
Sbjct: 148 -NLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVEL 206
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEV-NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EMS +GVNPD Y +L+D + V + R + +S + P++ YN ++ L
Sbjct: 207 FDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLC 266
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
++G LDE+ ++ M K K D ++ M+ LS G + ++ +++ G
Sbjct: 267 KLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESG 320
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
V++ L+ G+VR + + E+K K V Y +++ G +A
Sbjct: 466 VFNSLINGYVRAFKLEEAISVLREMKSK--DCAPTVVSYNTIINGLCKAERFSDAYLSLK 523
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E + E +K + + ++D LC K D AL L+ + N KRL +L N++
Sbjct: 524 EMLEE--GLKPDMITYSLLIDGLCRGEKVDMALNLWHQCIN-----KRLKPDLQMHNIII 576
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G C + A+E+F +M + C PD ++ N +++ L K G EA +++ + + G+
Sbjct: 577 HGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQ 636
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
PD +Y + RV D + +D G+ PN +N LV +V
Sbjct: 637 PDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVV 685
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 148/334 (44%), Gaps = 47/334 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G D + Y+ L+ GF+R GD F+K
Sbjct: 210 MSVRGVNPDVMCYNILIDGFLRKGD--------------------------------FVK 237
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
A E + + E SSV S N +++ LC GK DE++++++RM KNE +P
Sbjct: 238 -----ANEIWKRLLTE-SSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSP--- 288
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+L +F+ M G G F A +VF++M E SPD ++N ++ L + G L +
Sbjct: 289 ---DLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCF 345
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ MS K + +Y +L+ + +V+ Y++ + + GL+ + Y L+ L
Sbjct: 346 ELWNVMS-KNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGL 404
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ G L++A + + +D +Y M+ L G L++ +E++ + + S
Sbjct: 405 CKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNS 464
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
+ G + EE + L E K ++ A
Sbjct: 465 HVFNSLINGYVRAFKLEEAISVLREMKSKDCAPT 498
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 142/314 (45%), Gaps = 45/314 (14%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G AD Y L+ G ++G + R+ EE + + G D Y S++ G KGM
Sbjct: 388 RGLKADSTTYGLLINGLCKNGYLNKALRILEEAENE--GADLDTFAYSSMVHGLCKKGML 445
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A+E ++ + + K+++ NS+++ K +EA+ + MK++ P
Sbjct: 446 EQAVELIHQM--KKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAP-----T 498
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S+N + +G C RF DA ++M E PD ++++ LID LC+ + A L+
Sbjct: 499 VVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWH 558
Query: 184 EMSDKGVNPDEYTYGLLM---------DACFE-------VNRVDDGATY----------- 216
+ +K + PD + +++ D E VN V D T+
Sbjct: 559 QCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAG 618
Query: 217 --------FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF-FDIMVKKLKMDDASYK 267
+ +++++GL+P++ YN L + +A F +D + + + + ++
Sbjct: 619 DCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWN 678
Query: 268 FMMKALSDGGKLDE 281
+++A+ D L E
Sbjct: 679 VLVRAVVDDKPLME 692
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 146/324 (45%), Gaps = 15/324 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + D V +S L+ R+G F E++ G+V D V+Y L+ G+ G
Sbjct: 391 RGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER--SGIVPDNVIYTILIDGFCRNGAL 448
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A++ +E + M V N+ L+ LC F +A LF+ M P +
Sbjct: 449 SDALKMRDEMLARGCF--MDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVP-----D 501
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+F + GYC G A+ +F M PD +++N LID CK G + A+EL+
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M K + PD +YG +++ + + +M++ G+RPNL N L+ + G
Sbjct: 562 DMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG 621
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILE---IVGGILDDGGIEFSEE 300
+ +A + M+ + D+ F L DG + LE I+ ++ G++F+
Sbjct: 622 DMPKAYEYLSKMISNGIIPDS---FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNII 678
Query: 301 LQEFVKGELSKEGREEEVVKLMEK 324
+ EG+ +E +++ K
Sbjct: 679 TYNLILNGFCAEGKMQEAEQVLRK 702
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 124/258 (48%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D ++ L+ G+ +DG+ D LFE + + D V Y +L+ G+
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT--NLKPDKVTYNTLIDGFCKA 550
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A E +++ + ++ + ++ +VL+ C++G EAL L D+M + P
Sbjct: 551 GEMGRAKELWDDMIRKD--IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP--- 605
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL + N + GYC G A E KM PD+ S+N LID K L +A
Sbjct: 606 --NLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFI 663
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM +G+ + TY L+++ ++ + RKM++ G+ P+ A Y+ L+ V
Sbjct: 664 LINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHV 723
Query: 241 QVGMLDEAKSFFDIMVKK 258
+ EA F D M+++
Sbjct: 724 SQDNMKEAFRFHDEMLQR 741
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 139/324 (42%), Gaps = 41/324 (12%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE------------------KLG---- 41
KG AD V Y+ L+ + R+G + F+L K+G
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345
Query: 42 -----------GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
G+ + Y +L+ + EA E ++E V V+ +S+
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM--SRRGVLPDLVSFSSL 403
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ L NG +AL F M+ P + + ++ DG+C G DA+++ +M
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVI-----YTILIDGFCRNGALSDALKMRDEM 458
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
C D +++N ++ LCK M A+A+ L+ EM ++G+ PD YT+ L+ + +
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
D F MV + L+P+ YN L+ + G + AK +D M++K + D SY +
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578
Query: 270 MKALSDGGKLDEILEIVGGILDDG 293
+ G L E L + +L+ G
Sbjct: 579 LNGFCSSGLLPEALNLCDQMLEKG 602
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 15/282 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D +V +Y+ +R+G F+ L+ K GV L+ G G +
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEA-----FQILRRK--GVSVSINACNKLLGGLVRTGWVD 239
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A E Y E V ++++ N +++ALC + KF+ + M+ K + ++
Sbjct: 240 LAWEIYGEVV--RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG-----KGVFADI 292
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + + YC +G ++A ++ P L++N ++ LCK G A+++ E
Sbjct: 293 VTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIE 352
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G+ P+ TY L+ + + + F +M G+ P+L ++ L+G L + G
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
L +A F M + + D+ Y ++ G L + L++
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKM 454
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 8/240 (3%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
S G++Y L++ Y E E + + V +S A N +L L G D A
Sbjct: 185 SVGLIYDLLVRTYVQAKKLREGSEAFQ--ILRRKGVSVSINACNKLLGGLVRTGWVDLAW 242
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
+++ + + +N+ + N+M + C +F++ + M D +++N
Sbjct: 243 EIYGEVVRGG-----IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNT 297
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
LI+ C+ G++ EA +L S +G+ P TY ++ ++ + D +M+ G
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEIL 283
L PN A YN L+ ++ + + EA+ FD M ++ + D S+ ++ L+ G L + L
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQAL 417
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 98/194 (50%), Gaps = 9/194 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + D + Y ++ GF G L +++ EK G+ + V +L+KGY
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK--GIRPNLVTCNTLIKGYCRS 620
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A E ++ + ++ + + + N+++D ++A L + M+ + L
Sbjct: 621 GDMPKAYEYLSKMI--SNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK-----RGL 673
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N++ +G+C +G+ ++A +V RKM E +PD ++++LI+ + EA
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFR 733
Query: 181 LYGEMSDKGVNPDE 194
+ EM +G+ PD+
Sbjct: 734 FHDEMLQRGLVPDD 747
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 147/322 (45%), Gaps = 10/322 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ ++ R+GD D L L + G + V Y +++KG
Sbjct: 7 MRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSR--GCKPNTVNYNTVLKGLCSI 64
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A E +E V EN + V N +++ L G + + ++M ++H
Sbjct: 65 ERWVDAEELLDEMVRENCPPNEATV--NVIVNTLSRKGLLQKVTRYLEKM-SKHG----C 117
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N + G C QG A+E+ M + C PD +++N L+ LC +AEE
Sbjct: 118 TANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEE 177
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +MS PD T+ ++ + + F++M + G PN Y+ ++G L
Sbjct: 178 LMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLA 237
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+ G +++A + M K D Y+ + ++L+ K++E++++V L D GI
Sbjct: 238 KAGKMEQALELLNEMASKGYNTDKMYQLLTESLNKEDKIEEVVQVVHK-LQDSGISPQTV 296
Query: 301 LQEFVKGELSKEGREEEVVKLM 322
L V L + G+ + + ++
Sbjct: 297 LFNTVLLVLCRNGKTDYAIDVL 318
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 135/284 (47%), Gaps = 10/284 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G + V Y ++ +G ++A E N + K + V N+VL LC+ ++
Sbjct: 11 GCEPNVVTYNVIIDAMCREGDVDQARELLNSL--PSRGCKPNTVNYNTVLKGLCSIERWV 68
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A +L D M E+ PP N + NV+ + +G + KM ++ C+ + ++
Sbjct: 69 DAEELLDEMVRENCPP-----NEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVT 123
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+N +I +C+ G + A EL M G PD TY L+ ++ +D KM
Sbjct: 124 YNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMS 183
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
+ P+ +N ++ L Q G++ +A F M +K + +Y ++ L+ GK++
Sbjct: 184 QNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKME 243
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ LE++ + G ++++ + + L+KE + EEVV+++ K
Sbjct: 244 QALELLNEMASKG--YNTDKMYQLLTESLNKEDKIEEVVQVVHK 285
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 108/271 (39%), Gaps = 43/271 (15%)
Query: 22 RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVK 81
R G V R E++ + G ++ V Y +++ G +G + A+E + ++ K
Sbjct: 98 RKGLLQKVTRYLEKMSKH--GCTANVVTYNAVISGMCEQGHVDSALELLSNM--QSFGCK 153
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
V N++L LC+ ++++A +L +M P + +FN + C +G
Sbjct: 154 PDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNV-----TFNTIISFLCQKGLIL 208
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS--------------- 186
A EVF++M E C+P++ +++ +I L K G + +A EL EM+
Sbjct: 209 QAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTDKMYQLLTE 268
Query: 187 -------------------DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
D G++P + ++ + D MV G P
Sbjct: 269 SLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMP 328
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+ Y L+ L G L EA+ + +
Sbjct: 329 DELTYIILIEGLSYEGYLQEARELVSRLCSR 359
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
I++ R G C P+ +++N +ID +C+ G + +A EL + +G P+ Y ++
Sbjct: 4 IDLMRAEG---CEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
+ R D +MV PN A N +V L + G+L + + + M K +
Sbjct: 61 LCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTAN 120
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGI 289
+Y ++ + + G +D LE++ +
Sbjct: 121 VVTYNAVISGMCEQGHVDSALELLSNM 147
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 57/243 (23%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G A+ V Y+ ++ G G D L ++ G D V Y +L+KG
Sbjct: 112 MSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQS--FGCKPDIVTYNTLLKGLCSA 169
Query: 61 GMEEEAMECYNEAVGENSSVKMSA-------VANNSVLDALCNNGKFDEALKLFDRMKNE 113
E+A E +KMS V N+++ LC G +A ++F +M
Sbjct: 170 DQWEDA---------EELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQM--- 217
Query: 114 HNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE---------------------------- 145
P K N +++ + G G+ + A+E
Sbjct: 218 --PEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTDKMYQLLTESLNKEDK 275
Query: 146 ------VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
V K+ + SP T+ FN ++ LC+NG A ++ +M G PDE TY +
Sbjct: 276 IEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYII 335
Query: 200 LMD 202
L++
Sbjct: 336 LIE 338
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+ D V ++ ++ + G F +F+++ EK G + Y +++ G G E+A
Sbjct: 188 LPDNVTFNTIISFLCQKGLILQAFEVFKQMPEK--GCNPNSTTYSTIIGGLAKAGKMEQA 245
Query: 67 MECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+E NE G N+ KM + + ++L K +E +++ ++++ P+ +
Sbjct: 246 LELLNEMASKGYNTD-KMYQL----LTESLNKEDKIEEVVQVVHKLQDSGISPQTVL--- 297
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
FN + C G+ AI+V M Y C PD L++ LI+ L G L EA EL
Sbjct: 298 --FNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSR 355
Query: 185 MSDKGV 190
+ + V
Sbjct: 356 LCSRDV 361
>gi|224089585|ref|XP_002308767.1| predicted protein [Populus trichocarpa]
gi|222854743|gb|EEE92290.1| predicted protein [Populus trichocarpa]
Length = 454
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 148/322 (45%), Gaps = 17/322 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D V Y+ L+ + R D + + + +KE + D V Y SL+ G +
Sbjct: 37 GVLPDVVTYNTLINAYSRFVSFDAAYSVLDRMKE--ASIKPDIVTYNSLIAGAMRHCLLS 94
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
M+ + E + +K + N+++ + D+A ++F + + P +
Sbjct: 95 NCMDLFEEML--ELGIKPDIWSYNTLMHCFFKLERPDDAYRVFTDIILCYLSPSQ----- 147
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N M +G C G ++A+ +FRK+ + P +++N LI+ LCK L A + E
Sbjct: 148 ATYNTMLNGLCKCGFVENALMLFRKLKRHGFVPSLVTYNILINGLCKAWKLKTARWMLKE 207
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ G+ P+ TY +M CF R + G F +M+D G + Y +VG LV+
Sbjct: 208 LGASGLVPNVITYTTVMRCCFRSRRFEQGLEIFEEMIDKGYTFDGFAYCTVVGALVKTCR 267
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG---GIEFSEE 300
++EA + + MV + +D ASY ++ GGK LE+ G+LD G E E
Sbjct: 268 IEEASHYMERMVNTDIGLDMASYNTLINLYCKGGK----LEMAHGVLDKMEKEGFERDEY 323
Query: 301 LQEFVKGELSKEGREEEVVKLM 322
+ L +EG E ++ M
Sbjct: 324 TNTILMNGLCEEGDVEGAMEYM 345
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 125/341 (36%), Gaps = 85/341 (24%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y+ L+ G +R LFEE+ E G+ D Y +LM +F ++A
Sbjct: 76 DIVTYNSLIAGAMRHCLLSNCMDLFEEMLEL--GIKPDIWSYNTLMHCFFKLERPDDAYR 133
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + + + S N++L+ LC G + AL LF ++K P +L ++N
Sbjct: 134 VFTDIIL--CYLSPSQATYNTMLNGLCKCGFVENALMLFRKLKRHGFVP-----SLVTYN 186
Query: 129 VMADGYCGQG-----------------------------------RFKDAIEVFRKM--- 150
++ +G C RF+ +E+F +M
Sbjct: 187 ILINGLCKAWKLKTARWMLKELGASGLVPNVITYTTVMRCCFRSRRFEQGLEIFEEMIDK 246
Query: 151 -----GEYRCSP---------------------------DTLSFNNLIDQLCKNGMLAEA 178
G C+ D S+N LI+ CK G L A
Sbjct: 247 GYTFDGFAYCTVVGALVKTCRIEEASHYMERMVNTDIGLDMASYNTLINLYCKGGKLEMA 306
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ +M +G DEYT +LM+ E V+ Y M +G NL N +V +
Sbjct: 307 HGVLDKMEKEGFERDEYTNTILMNGLCEEGDVEGAMEY---MNVAGFNSNLVALNTMVDR 363
Query: 239 LVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKL 279
+ +D A FD M + D +Y ++ L G+
Sbjct: 364 WCKADQIDYAFKIFDSMDMR---DSFTYSSLIHNLCKVGRF 401
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 2/171 (1%)
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
T N I CK L AE + + GV PD TY L++A D +
Sbjct: 7 TRFLNICIASFCKAKHLQRAETVIIDGVRLGVLPDVVTYNTLINAYSRFVSFDAAYSVLD 66
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
+M ++ ++P++ YN L+ ++ +L F+ M++ +K D SY +M
Sbjct: 67 RMKEASIKPDIVTYNSLIAGAMRHCLLSNCMDLFEEMLELGIKPDIWSYNTLMHCFFKLE 126
Query: 278 KLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
+ D+ + I+ + S+ + L K G E + L K +R
Sbjct: 127 RPDDAYRVFTDII-LCYLSPSQATYNTMLNGLCKCGFVENALMLFRKLKRH 176
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 11/280 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + V+Y+ L+ F + G + + F ++ G+V++ V++ +L+ ++ +GM
Sbjct: 504 GVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYR--SGLVANSVIHNALLCSFYREGMIA 561
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA E + + + + + N ++D+ C G EA ++D M PP ++
Sbjct: 562 EA-EQFKQYMSR-MKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPP-----DI 614
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G C G A E + E C+ D + N L+ +CK+G L EA +L +
Sbjct: 615 CTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEK 674
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + + PD YTY +L+D + +V + M++ GL P+ Y L+ LV G
Sbjct: 675 MVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQ 734
Query: 245 LDEAKSFFDIMVKK--LKMDDASYKFMMKALSDGGKLDEI 282
+ A F ++ K L D +Y MM GG+++EI
Sbjct: 735 VKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEI 774
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 12/290 (4%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEE-LKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
D Y+ L+ GF +G + +F + L++ L V+ Y +L+ GY G +
Sbjct: 330 LTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVA---TYTALIDGYCRNGRTD 386
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA E + + V+ S + +++L+ C + K AL L +++ + +++N
Sbjct: 387 EARRVLYEM--QITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRS-----RSISINR 439
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ ++ DG+C G A ++ + M PD ++++ LI+ +CK GM+ E +E+
Sbjct: 440 TMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSR 499
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M GV P+ Y L+ + + YF + SGL N ++N L+ + GM
Sbjct: 500 MQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGM 559
Query: 245 LDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ EA+ F M + K+ D AS+ ++ + G + E + ++ G
Sbjct: 560 IAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHG 609
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 7/200 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N VL++LC GK +A + +MKN P N ++N + + Y +GR K A+ +
Sbjct: 234 NIVLNSLCTQGKLSKAESMLQKMKNCRLP------NAVTYNTILNWYVKKGRCKSALRIL 287
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M + D ++N +ID+LCK A A L M + + PDE +Y L+ F
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-FFDIMVKKLKMDDASY 266
+++ F +M+ L+P++A Y L+ + G DEA+ +++ + ++ + +Y
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTY 407
Query: 267 KFMMKALSDGGKLDEILEIV 286
++ KL L+++
Sbjct: 408 SALLNGYCKHSKLGPALDLI 427
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 9/278 (3%)
Query: 44 VSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEA 103
+ + V Y +++ Y KG + A+ ++ E + ++ N ++D LC + A
Sbjct: 261 LPNAVTYNTILNWYVKKGRCKSALRILDDM--EKNGIEADLYTYNIMIDKLCKLKRSARA 318
Query: 104 LKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFN 163
L RM+ + P S+N + G+ G+G+ AI +F +M P ++
Sbjct: 319 YLLLKRMREVNLTPDEC-----SYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYT 373
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
LID C+NG EA + EM GV P E TY L++ + +++ + +
Sbjct: 374 ALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSR 433
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEI 282
+ N +Y L+ Q+G + +AK M+ + D +Y ++ + G + E
Sbjct: 434 SISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHET 493
Query: 283 LEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
EI+ + G+ + L + K G +E +K
Sbjct: 494 KEILSR-MQKSGVLPNNVLYTTLVFYFCKAGHAKEALK 530
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 103/242 (42%), Gaps = 21/242 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y L+ G G + + E K L GV D + + L+K + K
Sbjct: 816 MVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLE--KMVLEGVFPDNLAFDILIKAFSEK 873
Query: 61 GMEEEAMEC--YNEAVGENSS------------VKMSAVANNSVLDALCNNGKFDEALKL 106
A++ Y + VG+ V S VA +S++ LC GK +EA+ +
Sbjct: 874 SKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIV 933
Query: 107 FDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
F + P + +F + G C + + DA + + M D +++N LI
Sbjct: 934 FSSIMRAGMVP-----TIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLI 988
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
LC + +A +LY EM KG+ P+ TY L A + + DG + + D G+
Sbjct: 989 TGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIV 1048
Query: 227 PN 228
P+
Sbjct: 1049 PS 1050
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 25/292 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V D + Y+ L+ G V +G +F+E+ K G+ +D + Y S+M GY +K
Sbjct: 710 MLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICK-EGLYADCIAYNSMMNGY-LK 767
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + +E + EN V S+ + N ++ G+ L L+ M E P +
Sbjct: 768 GGQINEIERLMRNMHEN-EVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNV 826
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
L F G C G + A++ KM PD L+F+ LI + ++ A +
Sbjct: 827 TYRLLIF-----GLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQ 881
Query: 181 LYG----------------EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
L+ +M GV P E ++ + +V++ F ++ +G
Sbjct: 882 LFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAG 941
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSD 275
+ P +A + L+ L + +D+A +M LK+D +Y ++ L +
Sbjct: 942 MVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCN 993
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 108/294 (36%), Gaps = 50/294 (17%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G AD + Y+ +M G+++ G + + RL + E V Y LM GY KG
Sbjct: 750 GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHE--NEVYPSSASYNILMHGYIKKGQLS 807
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ Y + V E +K V ++ LC G + A+K ++M E P LA ++
Sbjct: 808 RTLYLYRDMVKEG--IKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDI 865
Query: 125 ----------------------------GSFNVMAD------------------GYCGQG 138
G+F + D G C G
Sbjct: 866 LIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCG 925
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ ++AI VF + P +F L+ LCK + +A L M G+ D TY
Sbjct: 926 KVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYN 985
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+L+ + D + +M GL PN+ Y L G + G + + +
Sbjct: 986 VLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLL 1039
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 126/306 (41%), Gaps = 42/306 (13%)
Query: 16 LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVG 75
L++G + G D L E++ + ++ D Y L+ G+ +G A+ + +
Sbjct: 655 LLVGICKHGTLDEALDLCEKMVTR--NILPDTYTYTILLDGFCKRGKVVPALILL-QMML 711
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E V +A +L+ L N G+ A +F + + L + ++N M +GY
Sbjct: 712 EKGLVP-DTIAYTCLLNGLVNEGQVKAASYMFQEIICKEG----LYADCIAYNSMMNGYL 766
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
G+ + + R M E P + S+N L+ K G L+ LY +M +G+ PD
Sbjct: 767 KGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNV 826
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRP-NLAVYNRLVGKLVQVGMLDEAKSFFDI 254
TY LL+ E ++ + KMV G+ P NLA FDI
Sbjct: 827 TYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLA---------------------FDI 865
Query: 255 MVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
++K +S+ +L ++ VG I DG E E+++ G + E
Sbjct: 866 LIKAFSEKS--------KMSNALQLFSYMKWVGDI--DGAFELKEDMKAL--GVVPSEVA 913
Query: 315 EEEVVK 320
E +V+
Sbjct: 914 ESSIVR 919
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 97/202 (48%), Gaps = 7/202 (3%)
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRF 140
K S + N++L+AL K E + LF + + ++ +++ + N++ + C QG+
Sbjct: 192 KASLFSCNNILNALVGINK-SEYVWLFLK----ESLDRKFPLDVTTCNIVLNSLCTQGKL 246
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
A + +KM R P+ +++N +++ K G A + +M G+ D YTY ++
Sbjct: 247 SKAESMLQKMKNCR-LPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIM 305
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-L 259
+D ++ R ++M + L P+ YN L+ G ++ A F+ M+++ L
Sbjct: 306 IDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSL 365
Query: 260 KMDDASYKFMMKALSDGGKLDE 281
K A+Y ++ G+ DE
Sbjct: 366 KPSVATYTALIDGYCRNGRTDE 387
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 149/355 (41%), Gaps = 42/355 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF + V Y L+ G + G+++ RL +++ G D VVY S++
Sbjct: 163 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQ--GNCQPDVVVYTSIIDSLCKD 220
Query: 61 GMEEEAMECYNEAVGE---------------------------------NSSVKMSAVAN 87
EA +++ VG+ NS + V
Sbjct: 221 RQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIF 280
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
++V+DALC GK EA + D M P N+ ++N + DG+C Q +A++VF
Sbjct: 281 STVVDALCKEGKITEAHDVVDMMIIRGVEP-----NVVTYNALMDGHCLQSEMDEAVKVF 335
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M +P+ +S+N LI+ CK + +A L+ EM K + P+ TY LM V
Sbjct: 336 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHV 395
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASY 266
R+ D F +MV G P+LA Y L+ L + LDEA + I + D Y
Sbjct: 396 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 455
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
++ + G+L+ +I L G+ + + L + G +E KL
Sbjct: 456 TIVIDGMCRAGELEAARDIFSN-LSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 509
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 132/293 (45%), Gaps = 10/293 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D ++ L+ G +G LF+++ + G + V YG+L+ G G
Sbjct: 132 GLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE--GFQPNVVTYGTLINGLCKVGNTN 189
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ E + + V S++D+LC + + EA LF +M + P ++
Sbjct: 190 AAIRLLRSM--EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP-----DI 242
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + C +K + +M + PD + F+ ++D LCK G + EA ++
Sbjct: 243 FTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDM 302
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +GV P+ TY LMD + +D+ F MV +G PN+ YN L+ ++
Sbjct: 303 MIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQR 362
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+D+A F+ M +K L + +Y +M L G+L + + + ++ G I
Sbjct: 363 MDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIP 415
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 7/211 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
GV + V Y +LM G+ ++ +EA++ ++ V ++ + ++ N++++ C + D
Sbjct: 307 GVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMV--HNGYAPNVISYNTLINGYCKIQRMD 364
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A LF+ M K L N ++N + G C GR +DAI +F +M + PD +
Sbjct: 365 KATYLFEEMCQ-----KELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLAT 419
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ L+D LCK L EA L + ++PD Y +++D ++ F +
Sbjct: 420 YRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLS 479
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
GLRPN+ Y ++ L + G+LDEA F
Sbjct: 480 SKGLRPNVRTYTIMINGLCRRGLLDEANKLF 510
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G + V Y+ LM G + D ++F+ + G + + Y +L+ GY
Sbjct: 303 MIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH--NGYAPNVISYNTLINGYCKI 360
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A + E + + + V N+++ LC+ G+ +A+ LF M P
Sbjct: 361 QRMDKATYLFEEMCQK--ELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIP--- 415
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L ++ ++ D C + +A+ + + + PD + +ID +C+ G L A +
Sbjct: 416 --DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARD 473
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +S KG+ P+ TY ++++ +D+ F +M +G P+ YN + L+
Sbjct: 474 IFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLL 533
Query: 241 Q 241
Q
Sbjct: 534 Q 534
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 115/274 (41%), Gaps = 35/274 (12%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-----RLAVNLG------------ 125
S++++N N D+AL F+RM + H PP RL ++
Sbjct: 31 SSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLS 90
Query: 126 -------------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
+ N++ + +C R A V K+ + PDT +F LI LC
Sbjct: 91 NQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVE 150
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
G + +A L+ +M +G P+ TYG L++ +V + R M +P++ VY
Sbjct: 151 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 210
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
++ L + + EA + F MV + + D +Y ++ +L + + + ++ ++
Sbjct: 211 TSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI- 269
Query: 292 DGGIEFSEELQEFVKGELSKEGREEE---VVKLM 322
+ I + V L KEG+ E VV +M
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMM 303
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 130/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 195 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDDANELFDEML-----VKGLIPNG 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G+C GR A+E+++ M PD +++N LI LCK G L +A L E
Sbjct: 248 VTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD++TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 308 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGR 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 368 SVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKG 401
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 112/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G++ +GV + +L+ G+
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLIPNGVTFTTLIXGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + S+ + N+++ LC G +A L D M + P +
Sbjct: 261 GRVDLAMEIYKXMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKF 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A + ++M + D +++ LI LC+ G +AE+
Sbjct: 319 -----TYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M +G P++ YN L+
Sbjct: 374 MLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLM 429
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 104/263 (39%), Gaps = 18/263 (6%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 12 NSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSD 71
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 72 IYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYE 131
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP++ YN L+ +++G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M+ ++ D +Y ++ L K+D+ E+ +L G I
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFT 251
Query: 303 EFVKGELSKEGREE---EVVKLM 322
+ G K GR + E+ K M
Sbjct: 252 TLIXGH-CKNGRVDLAMEIYKXM 273
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 147/322 (45%), Gaps = 10/322 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG P VYS ++ G +DG + +FE + K G ++ +Y +L+ G
Sbjct: 313 KGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISK--GCKANVAIYTALIDSNAKCGNM 370
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EAM + E ++ V ++++LC +G+ DEAL+ E K +AVN
Sbjct: 371 GEAMLLFKRMKKEG--LEPDEVTYGVIVNSLCKSGRLDEALEYM-----EFCSGKGVAVN 423
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ + DG GR +A +F +M + C PD+ +N LID L K G + EA L
Sbjct: 424 AMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSK 483
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M G + YTY +L+ F +R ++ T + M+D G+ P A + L L G
Sbjct: 484 RMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSG 543
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+ A D M + + ++ M+ L G++ E ++ GI+D G E ++
Sbjct: 544 KVARACKILDEMAPMGVIPETAFDDMINILCKAGRIKEACKLADGIVDRGR-EIPGRVRT 602
Query: 304 FVKGELSKEGREEEVVKLMEKK 325
+ L K G + +KLM K
Sbjct: 603 VLINALRKAGNADLALKLMRSK 624
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 132/274 (48%), Gaps = 12/274 (4%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y L+ +G D V +F + KE G++ SL+K + GM EE + +
Sbjct: 147 YVSLIDVLATNGVLDSVKSVFSKFKEM--GLIMTVYSSNSLIKSFGNLGMVEEVLWVWRR 204
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ + ++ S + N +++ L N+ + A ++F+ M+N P ++ ++N M
Sbjct: 205 M--KENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGP-----DVVTYNTMIK 257
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
GYC G+ + A E + M +PD +++ LI G LY EM +KG+
Sbjct: 258 GYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEI 317
Query: 193 DEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
+ Y L++ C + RV +G T F M+ G + N+A+Y L+ + G + EA
Sbjct: 318 PPHVYSLVIGGLCKDGKRV-EGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLL 376
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLDEILE 284
F M K+ L+ D+ +Y ++ +L G+LDE LE
Sbjct: 377 FKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALE 410
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 6/239 (2%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+K+S + +L + K D A++ F + K+ NL + + D G
Sbjct: 104 IKLSPSFVSFILRSTELQTKPDVAIRFFTWAGKQ----KKYTHNLECYVSLIDVLATNGV 159
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
VF K E S N+LI GM+ E ++ M + G+ P ++Y
Sbjct: 160 LDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNF 219
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKK 258
L++ ++ F M + + P++ YN ++ +VG +A M ++
Sbjct: 220 LVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRN 279
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+ D +Y +++A G D L + +D+ G+E + V G L K+G+ E
Sbjct: 280 VAPDKITYMTLIQACYAEGDFDSCLGLYHE-MDEKGLEIPPHVYSLVIGGLCKDGKRVE 337
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
P V++Y L+ D + D ++ + EK G++ V Y +L+ GY KG+
Sbjct: 340 CQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEK--GLIPSVVTYNALIDGYCKKGLSAS 397
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A+E ++ E+++ +A N ++ C +A+ L +M ++L N+
Sbjct: 398 ALEIL--SLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLE-----RKLQPNVV 450
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N++ G C +G A ++ M E PD +++ ID LCK G++ EA L+ +
Sbjct: 451 TYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESL 510
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+KG+ +E Y L+D +V +V DG KM+ +G PN YN L+ +
Sbjct: 511 KEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNF 570
Query: 246 DEAKSFFDIMVKK 258
EA+ DIM+K+
Sbjct: 571 KEARLLVDIMIKR 583
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 14/280 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+LG+ R+ + D +F + K G + + V Y +L+ G+ +
Sbjct: 234 GLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNK--GCLRNEVSYTNLIHGFCEARRVD 291
Query: 65 EAMECYNEAVGENS--SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA++ +++ +N +V+ V ++ ALC G+ EAL +F M +H P
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTV----IIFALCQLGRKTEALNMFKEMTEKHCQP----- 342
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ ++ V+ C F DA ++ M E P +++N LID CK G+ A A E+
Sbjct: 343 NVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEIL 402
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M +P+ TY L+ + + KM++ L+PN+ YN L+ +
Sbjct: 403 SLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKE 462
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
G L A +M + L D+ +Y + L G ++E
Sbjct: 463 GDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEE 502
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 154/332 (46%), Gaps = 16/332 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + + V Y+ L+ GF D +LF ++ E Y ++ G +
Sbjct: 268 KGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHED--NCWPTVRTYTVIIFALCQLGRK 325
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA+ + E ++ + ++ +LC + FD+A K+ + M K L +
Sbjct: 326 TEALNMFKEMTEKHCQPNVHTYT--VLICSLCEDSNFDDAKKILNGMLE-----KGLIPS 378
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + DGYC +G A+E+ M CSP+ ++N LI C+ + +A L
Sbjct: 379 VVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLH 438
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY--FRKMVDSGLRPNLAVYNRLVGKLVQ 241
+M ++ + P+ TY +L+ + D G+ Y M +SGL P+ Y+ + L +
Sbjct: 439 KMLERKLQPNVVTYNILIHG--QCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCK 496
Query: 242 VGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
G+++EA+S F+ + +K +K ++ Y ++ GK+ + ++ +L G + S
Sbjct: 497 RGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSIT 556
Query: 301 LQEFVKGELSKEGREEE--VVKLMEKKEREKA 330
+ G ++ +E +V +M K++ E A
Sbjct: 557 YNSLIDGYCKEKNFKEARLLVDIMIKRDIEPA 588
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 119/281 (42%), Gaps = 32/281 (11%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ L+LGF R + L ++ E+ + + V Y L+ G +C
Sbjct: 416 TYNELILGFCRGKNIHKAMSLLHKMLER--KLQPNVVTYNILIHG-----------QCKE 462
Query: 72 EAVGENSSVKMSAVANNS-----------VLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+G S+ K+ ++ N S +D LC G +EA LF+ +K K +
Sbjct: 463 GDLG--SAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKE-----KGI 515
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++ + DGYC G+ D + KM C P+++++N+LID CK EA
Sbjct: 516 KANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARL 575
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M + + P TY +L+D + + D F +M+ +G P++ +Y +
Sbjct: 576 LVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYC 635
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDAS-YKFMMKALSDGGKLD 280
G L +A+ M K M D Y + A G +D
Sbjct: 636 SHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSID 676
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 9/235 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V D YS + + G + LFE LKEK G+ ++ V+Y +L+ GY G
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEK--GIKANEVIYSTLIDGYCKVGKVS 536
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ ++ + ++ +++ NS++D C F EA L D M P
Sbjct: 537 DGRFLLDKML--SAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAA----- 589
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ ++ D F A ++F +M PD + I C +G L +AE L +
Sbjct: 590 DTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICK 649
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
M+ KG+ PD Y L +DA +D ++M + G P+ Y+ L+ L
Sbjct: 650 MNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL 704
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 9/238 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G ++GD ++L + E G+V D Y + +G+ EEA +
Sbjct: 450 VTYNILIHGQCKEGDLGSAYKLLSLMNE--SGLVPDEWTYSVFIDTLCKRGLVEEARSLF 507
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E++ E +K + V ++++D C GK + L D+M + P + ++N +
Sbjct: 508 -ESLKE-KGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSI-----TYNSL 560
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DGYC + FK+A + M + P ++ LID L K+ +A +++ +M G
Sbjct: 561 IDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGS 620
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+PD + Y + A R+ D KM G+ P+ +Y + + G +D A
Sbjct: 621 HPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGA 678
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 12/231 (5%)
Query: 30 FRLFEELK----EKLGGVVSDGV-VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSA 84
F + +E+K E L +V+ + +++ GY G EA E Y + + + + +
Sbjct: 182 FLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEA-ELYVSKIVQ-AGLSLDT 239
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
S++ C N D A +F M P K N S+ + G+C R +A+
Sbjct: 240 FTYTSLILGYCRNKNVDAANAIFLSM-----PNKGCLRNEVSYTNLIHGFCEARRVDEAL 294
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
++F +M E C P ++ +I LC+ G EA ++ EM++K P+ +TY +L+ +
Sbjct: 295 KLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSL 354
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
E + DD M++ GL P++ YN L+ + G+ A +M
Sbjct: 355 CEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 2/214 (0%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ + N M +GYC G +A K+ + S DT ++ +LI C+N + A ++
Sbjct: 203 NIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIF 262
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M +KG +E +Y L+ E RVD+ F +M + P + Y ++ L Q+
Sbjct: 263 LSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQL 322
Query: 243 GMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G EA + F M K + + +Y ++ +L + D+ +I+ G+L+ G I
Sbjct: 323 GRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTY 382
Query: 302 QEFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
+ G K+G ++++ E AR
Sbjct: 383 NALIDG-YCKKGLSASALEILSLMESNNCSPNAR 415
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 12/164 (7%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
+++F KM E+ C+P+ ++ I LCK G L A L+ M +KG +P+E Y L+
Sbjct: 742 TLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLG 801
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA------KSFFDIMV 256
++ + + M+++ P+L KL+ G+ DE + F +
Sbjct: 802 CSCQLGLYGEAIRWLDIMIENRHLPHLD-----SCKLLLCGLYDEGNDEKAKRVFCSFLQ 856
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+ D+ +K ++ L G D+ ++ GI++ G + +
Sbjct: 857 CEYNYDEMVWKVLIDGLLKKGLSDKCSDLF-GIMETQGCQIHPK 899
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 11/182 (6%)
Query: 22 RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVK 81
R D + LF ++ E G + YG + G G E A ++ + S
Sbjct: 735 RRVDYEFTLDLFGKMAEH--GCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPN 792
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGSFNVMADGYCGQGRF 140
NS+L C G + EA++ D M +N H P +L S ++ G +G
Sbjct: 793 EDIY--NSLLGCSCQLGLYGEAIRWLDIMIENRHLP------HLDSCKLLLCGLYDEGND 844
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
+ A VF + + D + + LID L K G+ + +L+G M +G TY +L
Sbjct: 845 EKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSML 904
Query: 201 MD 202
++
Sbjct: 905 IE 906
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 83/193 (43%), Gaps = 8/193 (4%)
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
++ F+ RC +N L+ L + M+ E + +Y EM D V P+ +T +++
Sbjct: 160 VDAFKFKLTLRC------YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNG 213
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
++ V + Y K+V +GL + Y L+ + +D A + F M K +
Sbjct: 214 YCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRN 273
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+ SY ++ + ++DE L++ + +D + + L + GR+ E + +
Sbjct: 274 EVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWP-TVRTYTVIIFALCQLGRKTEALNMF 332
Query: 323 EKKEREKAEAKAR 335
++ + +
Sbjct: 333 KEMTEKHCQPNVH 345
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 99/255 (38%), Gaps = 15/255 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + D ++Y+ + + R G DG F + + + E G Y L+K +
Sbjct: 650 MNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEV--GCEPSYYTYSCLIK-HLSN 706
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+E + S S VA+N + ++ L LF +M EH
Sbjct: 707 AKPKEV------SSSSELSDLSSGVASNDFSNCW-RRVDYEFTLDLFGKMA-EHG----C 754
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A N ++ G C G + A +F M E SP+ +N+L+ C+ G+ EA
Sbjct: 755 APNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIR 814
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
M + P + LL+ ++ + F + + V+ L+ L+
Sbjct: 815 WLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLL 874
Query: 241 QVGMLDEAKSFFDIM 255
+ G+ D+ F IM
Sbjct: 875 KKGLSDKCSDLFGIM 889
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 149/318 (46%), Gaps = 10/318 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G AD V++ L+ + + G D +F E++++ GV D V Y +++ + G
Sbjct: 435 GIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQ--GVSPDVVTYSTVISAFSRMGRLT 492
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+AME +N+ V ++ + +S++ C +G +A +L M N+ P +
Sbjct: 493 DAMEKFNQMVARG--IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVF-- 548
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
FN + + C GR DA ++F + + PD ++F +LID C G + +A ++
Sbjct: 549 --FNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDA 606
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M GV D TY L+D F+ R++DG T FR+M G++PN Y ++ L + G
Sbjct: 607 MEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGR 666
Query: 245 LDEAKSFFDIMVKKLKMDDAS-YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
A+ F M++ S Y ++ L DE + I+ L ++FS +
Sbjct: 667 TVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI-ILFQKLGTMNVKFSITILN 725
Query: 304 FVKGELSKEGREEEVVKL 321
+ + K R+EE +L
Sbjct: 726 TMINAMYKVQRKEEAKEL 743
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 8/281 (2%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V + YS ++ G + S LF+ + ++ G + V Y +++ G+F +G
Sbjct: 223 GCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETG 282
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A ++E + VK V N ++DALC D+A + +M P +
Sbjct: 283 KACSLFHEMTRQG--VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTV---- 336
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N M GY GR K+A ++FRKM P+ + N+ + LCK+G EA E++
Sbjct: 337 -TYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDS 395
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ KG PD +Y L+ D F M +G+ + V+N L+ + GM
Sbjct: 396 MTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGM 455
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILE 284
+D+A F M ++ + D +Y ++ A S G+L + +E
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAME 496
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 9/254 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D V Y ++ GY G +EA + + + ++ + + V NS L +LC +G+
Sbjct: 330 GAQPDTVTYNCMIHGYATLGRLKEAAKMFRKM--KSRGLIPNIVICNSFLASLCKHGRSK 387
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EA ++FD M + + P ++ S+ + GY +G F D I +F M + D
Sbjct: 388 EAAEIFDSMTAKGHKP-----DIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRV 442
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
FN LI K GM+ +A ++ EM +GV+PD TY ++ A + R+ D F +MV
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMV 502
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMMKALSDGGKL 279
G++PN AVY+ ++ G L +AK M+ K + D + ++ +L G++
Sbjct: 503 ARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRV 562
Query: 280 DEILEIVGGILDDG 293
+ +I + D G
Sbjct: 563 MDAHDIFDLVTDIG 576
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 122/283 (43%), Gaps = 7/283 (2%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
YS LM R D LF + G+ + +L+K EEA+
Sbjct: 159 TYSILMDCCCRARRPDLGLVLFGCILRT--GLKIHQITASTLLKCLCYANRTEEAVNVLL 216
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+ E V + + + +L LC+N AL LF M E + N+ ++N +
Sbjct: 217 HRMSELGCVP-NVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGA---CSPNVVAYNTVI 272
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G+ +G A +F +M PD +++N +ID LCK + +AE + +M+ G
Sbjct: 273 HGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQ 332
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
PD TY ++ + R+ + A FRKM GL PN+ + N + L + G EA
Sbjct: 333 PDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEI 392
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FD M K K D SY ++ + G +++ + + +G
Sbjct: 393 FDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNG 435
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 131/279 (46%), Gaps = 10/279 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + ++ L+ G+ G D F++ + ++ + GV +D V Y +L+ GYF G + +
Sbjct: 580 DVITFTSLIDGYCLVGKMDKAFKILDAME--VVGVETDIVTYSTLLDGYFKNGRINDGLT 637
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ E + VK + V +L L G+ A K F M V + +
Sbjct: 638 LFREM--QRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGT-----TVTVSIYG 690
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
++ G C +AI +F+K+G N +I+ + K EA+EL+ +S
Sbjct: 691 IILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISAS 750
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ P+E TYG+++ + V+D F M SG+ P + NR++ L++ G + +A
Sbjct: 751 GLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810
Query: 249 KSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
++ + K++ ++ ++ M+ S GK E ++++
Sbjct: 811 GNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLL 849
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 126 GYPASLYFFNILMHRFCKDGDIRVAPLVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 183
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++ S V+ + +++ LC D+A +LFD M K L N
Sbjct: 184 EGFRL--KSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEML-----VKGLVPNX 236
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N L+ LCK G L +A L E
Sbjct: 237 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDE 296
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG+ PD++TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 297 MXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 356
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
D K +++ LK D +Y ++ G
Sbjct: 357 SXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 390
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V + V + +L+ G+
Sbjct: 192 MRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVK--GLVPNXVTFTTLIDGHCKN 249
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + + + N+++ LC G ++A L D M + P +
Sbjct: 250 GRVDLAMEIYKQMLSQ--XLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKF 307
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 308 -----TYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEK 362
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M +G P + YN L+
Sbjct: 363 MLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLM 418
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG V + V ++ L+ G ++G D +++++ + ++ D + Y +L+ G K
Sbjct: 227 MLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ--XLLPDJITYNTLVYGLCKK 284
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A +E + +K +++D C G D A + RM E+ +
Sbjct: 285 GDLNQAHGLIDEMXXK--GLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQEN-----I 337
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + G C +GR DA ++ R+M PDT ++ +I++ CK G + + +
Sbjct: 338 RLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSK 397
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L EM G P TY +LM+
Sbjct: 398 LLKEMQRNGHVPXVVTYNVLMN 419
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 96/252 (38%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + + + LC + F EA L + + AV +
Sbjct: 1 NSTFRHTLHSYCTTIHFLCTHQMFSEAKSLIQVVVSRKGKGSAXAVFAAILETKGTQRSD 60
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 61 IYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYE 120
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + F + GLRP++ YN L+ +++G
Sbjct: 121 EILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLG 180
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M ++ D +Y ++ L +D+ E+ +L G +
Sbjct: 181 DLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFT 240
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 241 TLIDGH-CKNGR 251
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 120/245 (48%), Gaps = 10/245 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ G+ + G + ++ ++ E G + V Y L+ GY E A+ Y
Sbjct: 290 VTYTSVISGYCKAGRMEDALSVYNDMLES--GTRPNTVTYNVLINGYGKALDMESAVRMY 347
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + V +S++D C G+ D+A++++ M H P N+ +F+++
Sbjct: 348 RQLILRRCPPDV--VTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQP-----NVYTFSII 400
Query: 131 ADGYCGQGRFKDAIEVFRKMG-EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
C Q R +A+ R++ +P T +N +ID LCK G + EA + +M +KG
Sbjct: 401 IHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKG 460
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+PD+YTY +L+ R+ + T F KMV++G RP+ N + +++ GM +E
Sbjct: 461 CHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVD 520
Query: 250 SFFDI 254
I
Sbjct: 521 QIMLI 525
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 146/351 (41%), Gaps = 45/351 (12%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
+P Y+ L+ + G + LFE + G DG + ++KG G ++A+E
Sbjct: 181 EPYAYNNLLNLLIARGRAQDAVALFESWIQD-GLYSPDGWSFNVVIKGVCRVGNFQKALE 239
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
S + +N ++D LC + + L R++ + N+ ++
Sbjct: 240 LVERMTEFGCSP--DTITHNILVDGLCRAKQVNRGHDLLRRLQRD----GVCMPNVVTYT 293
Query: 129 VMADGYCGQGRFKDAIEVFRKMGE-----------------------------------Y 153
+ GYC GR +DA+ V+ M E
Sbjct: 294 SVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILR 353
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
RC PD ++F++LID C+ G L +A ++ EM + P+ YT+ +++ + + NR +
Sbjct: 354 RCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEA 413
Query: 214 ATYFRKM-VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMK 271
+ R++ + + + P +YN ++ L + G ++EA D+ K D +Y ++
Sbjct: 414 LGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILII 473
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
G++ E + + +++ G + F+ L K G EV ++M
Sbjct: 474 GHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVL-KAGMPNEVDQIM 523
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 38/228 (16%)
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE--HNPPKRL---------------- 120
SV S + + V+ LC +G+ +ALKLFD+M ++ + P
Sbjct: 106 SVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDA 165
Query: 121 AVNLGS-------------FNVMADGYCGQGRFKDAIEVFRKM---GEYRCSPDTLSFNN 164
AV L + +N + + +GR +DA+ +F G Y SPD SFN
Sbjct: 166 AVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLY--SPDGWSFNV 223
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+I +C+ G +A EL M++ G +PD T+ +L+D +V+ G R++ G
Sbjct: 224 VIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDG 283
Query: 225 L-RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ PN+ Y ++ + G +++A S ++ M++ + + +Y ++
Sbjct: 284 VCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLI 331
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 94/223 (42%), Gaps = 6/223 (2%)
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR-CSPDTL 160
AL++F + H+PP + + S++ + C GR +DA+++F +M + PD +
Sbjct: 92 SALRIFSAL---HSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAV 148
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
F+ + G+L A L + S G + Y Y L++ R D F
Sbjct: 149 FFSFVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESW 208
Query: 221 VDSGL-RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGK 278
+ GL P+ +N ++ + +VG +A + M + D ++ ++ L +
Sbjct: 209 IQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQ 268
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
++ +++ + DG + V K GR E+ + +
Sbjct: 269 VNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSV 311
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 143/324 (44%), Gaps = 40/324 (12%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
V D VY+ ++ G V+ D +L + +K + ++ D Y SL+ G G EE
Sbjct: 699 LVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQ--NILPDLFTYTSLLDGLGKSGRLEE 756
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP-------- 117
A + + E + VA S++D L GK AL +F M + P
Sbjct: 757 AFNMFTKMTEEGH--EPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSL 814
Query: 118 ----------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
K N+G ++ + D + +G A+E+F +M +C
Sbjct: 815 IDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQC 874
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
P+ +++NNL+ L K G L AE+L EM G PD TY +L+D ++ VD+ +
Sbjct: 875 PPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAES 934
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
YF++M + G+ P++ + L+ L +V L EA FD M ++ +Y ++ L
Sbjct: 935 YFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILG 994
Query: 275 DGGKLDEILEI-----VGGILDDG 293
GK+ E I V G + DG
Sbjct: 995 RAGKVHEAAMIFHEMKVKGCMPDG 1018
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 146/303 (48%), Gaps = 26/303 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK-----LGGVVSDGVVYGSLMK 55
M KG VAD YS ++ + D D +F +KE+ LG Y +L+
Sbjct: 624 MVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGN-------YKTLLS 676
Query: 56 GYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
+ A++ +NE + SS+ N +++ L + + DEA KL D MKN++
Sbjct: 677 SLVKDEKIDFALQIFNEL--QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNI 734
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P +L ++ + DG GR ++A +F KM E PD +++ +L+D L K G L
Sbjct: 735 LP-----DLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKL 789
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+ A ++ M+ K PD TY L+D+ + RV++ +F + G PN+ VY+ L
Sbjct: 790 SHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSL 849
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD------EILEIVGG 288
+ + GM+D A F+ M ++ + +Y ++ L+ G+L+ E +E VG
Sbjct: 850 IDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGC 909
Query: 289 ILD 291
+ D
Sbjct: 910 VPD 912
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 1 MFVK----GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKG 56
MF K G D V Y+ LM + G +F + +K V D V Y SL+
Sbjct: 760 MFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK--RCVPDVVTYSSLIDS 817
Query: 57 YFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+G EEA + ++ + + + + S++D+ G D AL+LF+ M+ P
Sbjct: 818 LGKEGRVEEAYYFFENSISKGCTPNVGVYS--SLIDSFGKKGMVDRALELFEEMQRRQCP 875
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P N+ ++N + G GR A ++ +M + C PD +++N LID + K GM+
Sbjct: 876 P-----NIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVD 930
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EAE + M +KG+ PD T+ L+++ +V+++ + F M + G P++ YN L+
Sbjct: 931 EAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLI 990
Query: 237 GKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALS 274
L + G + EA F M VK D + M + LS
Sbjct: 991 DILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILS 1029
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 38/275 (13%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
++DAL +G DEA K F+ MKN P N+ ++ + +G GR ++A EVF +
Sbjct: 328 LIDALVKSGNIDEACKFFNGMKNLRCSP-----NVVTYTTLVNGLAKAGRLEEACEVFVE 382
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M E CSPD +++N LID L K G A L+ EM D+G+ P+ TY +++ + R
Sbjct: 383 MKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGR 442
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK----------- 258
+ F + + G P++ YN L+ L + G +D+ + MV+K
Sbjct: 443 QPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSN 502
Query: 259 ---------------------LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
+ + +Y +M A G +DE ++++ + I
Sbjct: 503 AGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPT 562
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
V G L K GR +E V L+ + E++ E
Sbjct: 563 VVTYTTLVDG-LGKAGRLDEAVSLLREMEKQGCEP 596
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 153/359 (42%), Gaps = 38/359 (10%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLM----KG--- 56
+G V + Y+ ++ + G ++LF +LKE+ G V D Y +L+ KG
Sbjct: 421 RGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQ--GAVPDVFTYNTLIDVLGKGGQM 478
Query: 57 ----YFMKGMEEEAMECY---NEAVGENSSVK---------------MSAVANNSVLDAL 94
+K M E+ EC + G +++ + + N+++ A
Sbjct: 479 DKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAF 538
Query: 95 CNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
+NG DEA+KL + MK P + ++ + DG GR +A+ + R+M +
Sbjct: 539 IHNGHVDEAVKLLEVMKKHECIP-----TVVTYTTLVDGLGKAGRLDEAVSLLREMEKQG 593
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C P +++++L+ K E+ L+ EM KG D TY L+++ + + VD
Sbjct: 594 CEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQAL 653
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKAL 273
F +M + G+ P L Y L+ LV+ +D A F+ + L D Y M+ L
Sbjct: 654 DVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGL 713
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
++DE ++V + + + + G L K GR EE + K E E
Sbjct: 714 VKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDG-LGKSGRLEEAFNMFTKMTEEGHEP 771
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 134/310 (43%), Gaps = 35/310 (11%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+ V Y+ L+ G + G D L E++++ G V Y SLM ++ + EEE+
Sbjct: 560 IPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQ--GCEPSVVTYSSLMASFYKRDQEEES 617
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--------- 117
+ ++E V + +S + V++ LC + D+AL +F RMK E P
Sbjct: 618 LSLFDEMVRKGCVADVSTYS--LVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLL 675
Query: 118 ---------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
L + +N+M +G R +A ++ M
Sbjct: 676 SSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNIL 735
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
PD ++ +L+D L K+G L EA ++ +M+++G PD Y LMD + ++
Sbjct: 736 PDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALII 795
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSD 275
FR M P++ Y+ L+ L + G ++EA FF+ + K + Y ++ +
Sbjct: 796 FRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGK 855
Query: 276 GGKLDEILEI 285
G +D LE+
Sbjct: 856 KGMVDRALEL 865
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 103/220 (46%), Gaps = 8/220 (3%)
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+C+ G+ + ++ L + D +++ M E + R++++L
Sbjct: 166 KCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGH---RISMHL--L 220
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ + A+E+F +M + C+P T +N +++ L K G A ++G++
Sbjct: 221 TSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQ 280
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+ PD T+ + + + R+D A ++M+ SG+ P + + L+ LV+ G +DE
Sbjct: 281 FRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDE 340
Query: 248 AKSFFDIMVKKLKMDD--ASYKFMMKALSDGGKLDEILEI 285
A FF+ M K L+ +Y ++ L+ G+L+E E+
Sbjct: 341 ACKFFNGM-KNLRCSPNVVTYTTLVNGLAKAGRLEEACEV 379
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 148/332 (44%), Gaps = 48/332 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF+ D YS ++ + F+LF+E+K G+ D Y +L+ +
Sbjct: 113 MMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKR--NGITPDVYTYTTLLDRFCKV 170
Query: 61 GMEEEAMECYNEAVGENSS---VKMSA------------------------------VAN 87
G+ E+A ++E + + V +A V
Sbjct: 171 GLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTY 230
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV------------NLGSFNVMADGYC 135
+++D C G+ ++A +++ RMKN+ + + N+ ++ + DG C
Sbjct: 231 TALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLC 290
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+ K+A ++ M C P+ + ++ LID CK G L EA+E++ +M G +P+ Y
Sbjct: 291 KAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVY 350
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
TY L+D F+ R+D KM+++ PN+ +Y +V L +VG DEA +M
Sbjct: 351 TYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMM 410
Query: 256 VKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+K + +Y M+ G++D LE++
Sbjct: 411 EEKGCYPNVVTYTAMIDGFGKAGRVDRCLELL 442
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 34/276 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG--------------------DSDGVFRLFE-ELKEK 39
M G V + V Y+ L+ G + G D D FR+ + ELKE
Sbjct: 218 MLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKE- 276
Query: 40 LGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK 99
+ V YG+L+ G +EA + E + + + ++++D C GK
Sbjct: 277 -----PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGC--EPNQIIYDALIDGFCKVGK 329
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
DEA ++F +M P N+ +++ + D R A++V KM E C+P+
Sbjct: 330 LDEAQEVFTKMLGHGCSP-----NVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNV 384
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
+ + ++D LCK G EA L M +KG P+ TY ++D + RVD +
Sbjct: 385 VIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQL 444
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
M G PN Y L+ G+LD+A + M
Sbjct: 445 MTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEM 480
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 129/295 (43%), Gaps = 27/295 (9%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ L+ +++ +FE + G V + V Y +L+ G+ G E
Sbjct: 187 GCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLS--NGCVPNIVTYTALIDGHCKAGETE 244
Query: 65 EAMECYNEAVGENSSVKM-----------------SAVANNSVLDALCNNGKFDEALKLF 107
+A + Y A +N V + + V +++D LC K EA L
Sbjct: 245 KACQIY--ARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLL 302
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
+ M E P ++ ++ + DG+C G+ +A EVF KM + CSP+ ++++LID
Sbjct: 303 ETMSLEGCEPNQII-----YDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLID 357
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
+L K+ L A ++ +M + P+ Y ++D +V + D+ M + G P
Sbjct: 358 KLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYP 417
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
N+ Y ++ + G +D +M K + +Y+ ++ G LD+
Sbjct: 418 NVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDD 472
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 21/261 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF-- 58
M +G P++++ L+ + R GD ++L + K + G VVY L+ G
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLK--KMVICGYQPGYVVYNILIGGICST 59
Query: 59 -------MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK 111
+ G+ E A YNE + + V N + LC GKF++A + M
Sbjct: 60 EDLPSMEVIGLAERA---YNEMLEMGVVLNKVNVCNFT--RCLCCIGKFEKAYNVIREMM 114
Query: 112 NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCK 171
++ P +++ + C + + A ++F++M +PD ++ L+D+ CK
Sbjct: 115 SKGFIPDS-----STYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCK 169
Query: 172 NGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
G++ +A + EM G P+ TY L+ A + ++ F M+ +G PN+
Sbjct: 170 VGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVT 229
Query: 232 YNRLVGKLVQVGMLDEAKSFF 252
Y L+ + G ++A +
Sbjct: 230 YTALIDGHCKAGETEKACQIY 250
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 133/315 (42%), Gaps = 41/315 (13%)
Query: 40 LGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK 99
L G + ++Y +L+ G+ G +EA E + + +G S + +S++D L + +
Sbjct: 307 LEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSP--NVYTYSSLIDKLFKDKR 364
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
D ALK+ +M P N+ + M DG C G+ +A + M E C P+
Sbjct: 365 LDLALKVLTKMLENSCAP-----NVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNV 419
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA----- 214
+++ +ID K G + EL M+ KG P+ TY +L++ C +DD
Sbjct: 420 VTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEE 479
Query: 215 ---TYFRKMV-------------------------DSGLRPNLAVYNRLVGKLVQVGMLD 246
TY+ K + + G P L VY L+ ++ G L+
Sbjct: 480 MKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLE 539
Query: 247 EAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A + + +Y ++++L+ K+D+ ++ + G + L +K
Sbjct: 540 MALELHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIK 599
Query: 307 GELSKEGREEEVVKL 321
G L + G+ EE ++L
Sbjct: 600 G-LLRVGKWEEALQL 613
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 142/294 (48%), Gaps = 14/294 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++G+ +F+ + + G+ V + +LM GY G+ +
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIRLAQLVFDAITK--WGLKPSVVSFNTLMNGYIKMGILD 188
Query: 65 EAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
E N A G V +V +++ LC K DEA +LFD M K L
Sbjct: 189 EGFRLKNAMHASGAQPDVYTYSV----LINGLCKESKMDEAHELFDEMLE-----KGLVP 239
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +F + DG+C G+ A+E+++++ SPD +++N LI CK G L + +L
Sbjct: 240 NGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLI 299
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EMS KG+ PD+ TY L+D + ++ Y +KM++ +R + VY L+ L +
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKE 359
Query: 243 GM-LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
G +D K +++ LK D +Y +M G ++ +++ + DG +
Sbjct: 360 GRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHV 413
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 11/226 (4%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
A P VY+Y +L G ++ D LF+E+ EK G+V +GV + +L+ G+ G +
Sbjct: 202 AQPDVYTYSVLINGLCKESKMDEAHELFDEMLEK--GLVPNGVTFTTLIDGHCKNGKLDL 259
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
AME Y + + + S + + N+++ C G + L D M + P ++
Sbjct: 260 AMEIYKQILSQGLSPDL--ITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKI----- 312
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ + DG C +G + A E +KM E D + + LI LCK G +AE++ EM
Sbjct: 313 TYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREM 372
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
G+ PD TY ++M+ + V+ G+ ++M G P++
Sbjct: 373 LSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 8/256 (3%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
+F + E G SD V+ L+ Y G +A+EC+ + V VL
Sbjct: 51 VFAAILETKGTQRSDIYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTC--RKVL 108
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
D L F + + P +L FN++ +C +G + A VF +
Sbjct: 109 DHLMKLKYFKLVWGFYKEILECGYP-----ASLYFFNILMHRFCKEGEIRLAQLVFDAIT 163
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
++ P +SFN L++ K G+L E L M G PD YTY +L++ + +++D
Sbjct: 164 KWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMD 223
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMM 270
+ F +M++ GL PN + L+ + G LD A + I+ + L D +Y ++
Sbjct: 224 EAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLI 283
Query: 271 KALSDGGKLDEILEIV 286
G L + +++
Sbjct: 284 YGFCKKGDLKQTRDLI 299
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 108/266 (40%), Gaps = 49/266 (18%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLHSYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYR-------CS-------------------- 156
+ F+ + Y G +DA+E FR E++ C
Sbjct: 66 IYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYK 125
Query: 157 -------PDTLS-FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
P +L FN L+ + CK G + A+ ++ ++ G+ P ++ LM+ ++
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMG 185
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
+D+G M SG +P++ Y+ L+ L + +DEA FD M++K L + ++
Sbjct: 186 ILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFT 245
Query: 268 FMMKALSDGGKLDEILEIVGGILDDG 293
++ GKLD +EI IL G
Sbjct: 246 TLIDGHCKNGKLDLAMEIYKQILSQG 271
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + D VVY+ L+ GF + GD + F E+ + + D + Y +++ G+
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR--DITPDVLTYTAIISGFCQI 399
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + ++E + ++ +V +++ C G +A ++ + M P
Sbjct: 400 GDMVEAGKLFHEMFCKG--LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP--- 454
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + DG C +G A E+ +M + P+ ++N++++ LCK+G + EA +
Sbjct: 455 --NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L GE G+N D TY LMDA + +D ++M+ GL+P + +N L+
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 241 QVGMLDEAKSFFDIMVKK 258
GML++ + + M+ K
Sbjct: 573 LHGMLEDGEKLLNWMLAK 590
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 139/295 (47%), Gaps = 14/295 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y+ L+ G ++GD D L E+ + G+ + Y S++ G
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI--GLQPNIFTYNSIVNGLCKS 504
Query: 61 GMEEEAMECYNEAVGENSSVKMSA--VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G EEA++ VGE + ++A V +++DA C +G+ D+A ++ M K
Sbjct: 505 GNIEEAVK----LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG-----K 555
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L + +FNV+ +G+C G +D ++ M +P+ +FN+L+ Q C L A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+Y +M +GV PD TY L+ + + + F++M G +++ Y+ L+
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
++ EA+ FD M ++ L D + F G + D I++ + I+++
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 7/240 (2%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
++ ++V++ C G+ D+ KL + MK K L N + + C + +A
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKR-----KGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
E F +M PDT+ + LID CK G + A + + EM + + PD TY ++
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
++ + + F +M GL P+ + L+ + G + +A + M++ +
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+Y ++ L G LD E++ + G V G L K G EE VKL+
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG-LCKSGNIEEAVKLV 514
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 91/197 (46%), Gaps = 5/197 (2%)
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P + N+ S+N++ C GR K+A + M +PD +S++ +++ C+ G L
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+ +L M KG+ P+ Y YG ++ + ++ + F +M+ G+ P+ VY L
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
Query: 236 VGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE----ILEIVGGIL 290
+ + G + A K F+++ + + D +Y ++ G + E E+ L
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 291 DDGGIEFSEELQEFVKG 307
+ + F+E + + K
Sbjct: 418 EPDSVTFTELINGYCKA 434
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 14/179 (7%)
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA-----DGYCGQGRFKDAIE 145
L + G EA ++F++M N L +++ S NV D Y + AI
Sbjct: 182 FQVLVDFGLLREARRVFEKMLNYG-----LVLSVDSCNVYLTRLSKDCY----KTATAII 232
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
VFR+ E + S+N +I +C+ G + EA L M KG PD +Y +++
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA 264
+D M GL+PN +Y ++G L ++ L EA+ F M+++ + D
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 141/282 (50%), Gaps = 13/282 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + V ++ + + G + +L E + E G V Y +L+ G+ ++
Sbjct: 388 MVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEY--GCSVGIVTYNALVHGFCVQ 445
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+E +N E +++ + ++L LC+ + D A +L M + P
Sbjct: 446 GRVDSALELFNNLPCEPNTITYT-----TLLTGLCHAERLDAAAELLAEMIQKDCP---- 496
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N +FNV+ +C +G ++A+E+ +M E+ C+P+ ++FN L+D + K+ EA E
Sbjct: 497 -LNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALE 555
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L + KGV+ D TY ++D +R ++ + D G+RP + +YN+++ L
Sbjct: 556 LLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALC 615
Query: 241 QVGMLDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDE 281
+ D+A FF MV M ++++Y +++ L+ G L E
Sbjct: 616 KRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKE 657
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 115/242 (47%), Gaps = 7/242 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S V +L+A+C + F EA+ + D M+ + P N+ ++NV+ +G C +GR D
Sbjct: 186 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTP-----NIVTYNVIINGMCREGRVDD 240
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A E+ ++ Y PD +S+ ++ LC + + L+ EM DK P+E T+ +L+
Sbjct: 241 AKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVR 300
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKM 261
V+ ++M G PN + N ++ + + G +D+A F + M +
Sbjct: 301 FFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNP 360
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
D SY +++ L G+ + E++ ++ F+ L ++G E+ +KL
Sbjct: 361 DTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFI-CILCQKGLIEQAIKL 419
Query: 322 ME 323
+E
Sbjct: 420 IE 421
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 19/295 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ ++ G R+G D + L G D V Y +++KG
Sbjct: 213 MRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSY--GFQPDIVSYTTVLKGLCAA 270
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL----CNNGKFDEALKLFDRMKNEHNP 116
++ + E V + V N D L C G + A+++ +M
Sbjct: 271 RRWDDVKVLFAEMVDKK------CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCT 324
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P N N++ + C QGR DA + MG Y C+PDT+S+ ++ LC+ G
Sbjct: 325 P-----NTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWE 379
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
A+EL EM K P+E T+ + + ++ M + G + YN LV
Sbjct: 380 HAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALV 439
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
G +D A F+ + + + +Y ++ L +LD E++ ++
Sbjct: 440 HGFCVQGRVDSALELFNNL--PCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQ 492
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C P +++ L++ +CK+ EA + EM KG P+ TY ++++ RVDD
Sbjct: 183 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 242
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKAL 273
++ G +P++ Y ++ L D+ K F MV KK ++ ++ +++
Sbjct: 243 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 302
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
GG ++ ++++ + G + L V + K+GR
Sbjct: 303 CRGGMVERAIQVLQQ-MSQHGCTPNTTLCNIVINAICKQGR 342
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +G P TY +L++A + + + +M G PN+ YN ++ + + G
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE----FSE 299
+D+AK + + + D SY ++K L + D++ + ++D + F
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKERE 328
++ F +G G E ++++++ +
Sbjct: 298 LVRFFCRG-----GMVERAIQVLQQMSQH 321
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 140/295 (47%), Gaps = 16/295 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF + VVY+ L+ F ++G +D +L +E+++ G+ D V + + + G
Sbjct: 121 GFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKD--GLSPDVVTFNARISALCSSGKVL 178
Query: 65 EAMECY-----NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
EA + +E +G + + N +L C G +EA LF++MK N
Sbjct: 179 EASRIFRDMQIDEVLGLPQP---NIITYNLMLGGFCKEGMLEEARALFEKMKVSEN---- 231
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+N S+N+ G G+ +A V ++M + P+ S+N ++D LCKNG+L +A
Sbjct: 232 -LMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDAR 290
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L M+ GV PD TY L+ +V + R+M+ G PN N L+ L
Sbjct: 291 MLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSL 350
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G + EA+ M +K +D + ++ L + GKLD+ +EIV G+ G
Sbjct: 351 WKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHG 405
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 10/221 (4%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S V N ++ LC++G D+A +LFD+M P K N SF ++ GYC
Sbjct: 50 SGVSPETYTFNVLIGLLCDSGCLDDARELFDKM-----PEKGCEPNEYSFGILVRGYCRA 104
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G +E+ +M SP+ + +N LI CK G +AE+L EM G++PD T+
Sbjct: 105 GFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTF 164
Query: 198 GLLMDACFEVNRVDDGATYFRKM-VDSGL---RPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
+ A +V + + FR M +D L +PN+ YN ++G + GML+EA++ F+
Sbjct: 165 NARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFE 224
Query: 254 IM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
M V + M+ SY + L GKL E ++ ++D G
Sbjct: 225 KMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMG 265
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 135/304 (44%), Gaps = 41/304 (13%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVV----YGSLMKGYFMKGMEEEA 66
+ Y+ ++ GF ++G + LFE++K VS+ ++ Y + G G EA
Sbjct: 201 ITYNLMLGGFCKEGMLEEARALFEKMK------VSENLMNRESYNIWLLGLVRIGKLLEA 254
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
E V + ++ + + N V+D LC NG +A L M + P + +
Sbjct: 255 QLVLKEMV--DMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTV-----T 307
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+ + GYC G+ +A V R+M CSP+ + N L+ L K G ++EAEEL +M+
Sbjct: 308 YTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDD-------------------GATYFRKMVDSGLR- 226
+KG D T +++D ++D G +Y + DS R
Sbjct: 368 EKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRK 427
Query: 227 ---PNLAVYNRLVGKLVQVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
P+L Y+ ++ L + G + EAK F ++M K L+ D A Y + + GK+
Sbjct: 428 KCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSA 487
Query: 283 LEIV 286
++
Sbjct: 488 FRVL 491
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 9/220 (4%)
Query: 109 RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
R + NPP ++ +NV+ +GR + + M SP+T +FN LI
Sbjct: 11 RFRFPENPP-----SIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGL 65
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
LC +G L +A EL+ +M +KG P+EY++G+L+ G +M G PN
Sbjct: 66 LCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPN 125
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVG 287
VYN L+ + G D+A+ D M K L D ++ + AL GK+ E I
Sbjct: 126 KVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFR 185
Query: 288 GILDDGGIEFSEE---LQEFVKGELSKEGREEEVVKLMEK 324
+ D + + + G KEG EE L EK
Sbjct: 186 DMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEK 225
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 141/374 (37%), Gaps = 96/374 (25%)
Query: 9 DPVVYSY--LMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+P VYSY +M G ++G D+ + RL GV+ D V Y +L+ GY G
Sbjct: 267 EPNVYSYNIVMDGLCKNGVLFDARMLMRLMTS-----SGVLPDTVTYTTLLHGYCHTGKV 321
Query: 64 EEAMECYNEAVGENSSVK---------------------------------MSAVANNSV 90
EA E + + S + V N V
Sbjct: 322 SEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIV 381
Query: 91 LDALCNNGKFDEALKLFDRMK------------------NEHNPPKRLAVNLGSFNVMAD 132
+D LCNNGK D+A+++ + M ++ + K+ +L S++ +
Sbjct: 382 IDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIIS 441
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE------------- 179
G C GR +A + F +M PD+ ++ I CK G ++ A
Sbjct: 442 GLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNK 501
Query: 180 -------------------ELYG---EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
E+YG EM ++GV+PD Y ++ + E RV D +
Sbjct: 502 TLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVL 561
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+M+ G+ PN++ ++ L+ + F+I + +A Y L GG
Sbjct: 562 DEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGG 621
Query: 278 KLDEILEIVGGILD 291
++ + E+ LD
Sbjct: 622 EVVKAKELFETALD 635
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 14/250 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K D +Y + F ++G FR+ +++++K G Y SL+ G
Sbjct: 459 MMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKK--GCNKTLQTYNSLIMGL--- 513
Query: 61 GMEEEAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G + + E Y + + E ++ NN VL +LC G+ +A + D M + P
Sbjct: 514 GSKNQIFEIYGLIDEMRERGVSPDVSIYNN-VLSSLCEGGRVKDAPSVLDEMLQKGISP- 571
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N+ SF+++ +C F E+F ++ C ++ ++L G + +A
Sbjct: 572 ----NISSFSILIKAFCKACDFSAVDEIF-EIALNVCGHKEALYSLTFNELLVGGEVVKA 626
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+EL+ D+ + + Y L+D + ++DD + K++D G + A + ++
Sbjct: 627 KELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDG 686
Query: 239 LVQVGMLDEA 248
L + G EA
Sbjct: 687 LGKRGNKHEA 696
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF + ++ L+ G+ R G + L+ E+K + GV D V + + + G +
Sbjct: 559 MIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGR--GVFPDAVAFAAFINGLCIS 616
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL----CNNGKFDEALKLFDRMKNEHNP 116
G+ +A + +++ + + V NN V ++L C GK +EALKL M
Sbjct: 617 GLMTDAYDVFSDML------RKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLL 670
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P VN+ + G C QGR K AIE F M SPD +++N LID CK +
Sbjct: 671 PDIFTVNM-----IICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVG 725
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
A++L +MSD G PD TY + + V +++ +++ G+ PN YN ++
Sbjct: 726 GADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMI 785
Query: 237 GKLVQVGMLDEA 248
+ V +LD A
Sbjct: 786 NAVCNV-ILDHA 796
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 137/316 (43%), Gaps = 45/316 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + +VY+ ++ G+V+ D LFEE++ K +V DG+ + +L+ G++ G EE
Sbjct: 388 GLSQNTIVYNIMISGYVKARDISQANLLFEEMRTK--DIVPDGITFNTLVAGHYRYGKEE 445
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ + + + + S++ + +V LC G++DEA+KL + + + PP +A
Sbjct: 446 DGNRLLRD-LSVSGLLHDSSLCDVTV-AGLCWAGRYDEAMKLLENLLGKGIPPSVVA--- 500
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA------ 178
FN + Y G + A + M ++ +P + + ++L+ L + G L EA
Sbjct: 501 --FNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYD 558
Query: 179 -----------------------------EELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
E L+ EM +GV PD + ++
Sbjct: 559 MIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGL 618
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+ D F M+ G PN VYN L+G +VG L+EA M K+ L D +
Sbjct: 619 MTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNM 678
Query: 269 MMKALSDGGKLDEILE 284
++ L G++ +E
Sbjct: 679 IICGLCKQGRMKLAIE 694
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 122/286 (42%), Gaps = 21/286 (7%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
SD V +LM+ + M EA+E ++ + SA++ + L G
Sbjct: 216 SDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAIS--ILFRLLIRAGDCGAVW 273
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
KLF + + P +FN++ +C +G + + MG++RC PD S+N
Sbjct: 274 KLFGDVVRKGPCPNNF-----TFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNI 328
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+I+ C G + A L M + G P T+ ++DA + V+ YF ++ D G
Sbjct: 329 VINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMG 388
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKAL------SDGG 277
L N VYN ++ V+ + +A F+ M K + D ++ ++ DG
Sbjct: 389 LSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGN 448
Query: 278 KLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+L L V G+L D L + L GR +E +KL+E
Sbjct: 449 RLLRDLS-VSGLLHD------SSLCDVTVAGLCWAGRYDEAMKLLE 487
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 9/254 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G +P S L +R GD V++LF ++ K G + + L+ + KG
Sbjct: 248 GVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRK--GPCPNNFTFNLLILEFCRKGWTR 305
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E +G+ + + N V++A C G+ AL L + M P ++
Sbjct: 306 IG-EALLHVMGK-FRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKP-----SI 358
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + D +C +G + A + F ++ + S +T+ +N +I K +++A L+ E
Sbjct: 359 ATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEE 418
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M K + PD T+ L+ + + +DG R + SGL + ++ + V L G
Sbjct: 419 MRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGR 478
Query: 245 LDEAKSFFDIMVKK 258
DEA + ++ K
Sbjct: 479 YDEAMKLLENLLGK 492
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ L+LG R+ + D F +F+ + + G + V Y +L+ G +G EEAM+
Sbjct: 239 TYTSLILGHCRNHNLDLAFAMFDRMVKD--GCDPNSVTYSTLINGLCSEGRLEEAMDMLE 296
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E V + ++ + L +LC+ G EA++L +MK P N+ +F +
Sbjct: 297 EMVQK--GIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVP-----NIQTFTALI 349
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G G+F+ AI ++ KM P T+++N LI+QLC G A ++ M G
Sbjct: 350 SGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSL 409
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P TY ++ + + F KM+ +G PN+ YN L+ + G L+ A
Sbjct: 410 PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRL 469
Query: 252 FDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+IM LK D +Y ++ S GGKL+ + G+++ G
Sbjct: 470 LEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 10/276 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V + ++ L+ G RDG + L+ ++ G+V V Y +L+ ++G
Sbjct: 336 RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD--GLVPTTVTYNALINQLCVEGRF 393
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A + + S S N ++ C G +A+ +FD+M + P N
Sbjct: 394 ETAFTIFKWMLSHGSLP--STQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP-----N 446
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + GYC QG +A+ + M PD ++ LI + G L A L+
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + G++P+ TY ++D F + +VDD F KMV+SG P+ YN ++ +
Sbjct: 507 GMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTN 566
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
+ EA++F MVK+ L + +Y + L G+
Sbjct: 567 SISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGR 602
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 45/319 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ GF R G + LF + E G+ + V Y +++ GYF +
Sbjct: 477 GLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEH--GISPNHVTYTAIIDGYFNLAKVD 534
Query: 65 EAM---------------ECYNEAV-----------GENSSVKM-------SAVANNSVL 91
+A+ + YN + EN KM + + S +
Sbjct: 535 DALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA--IEVFRK 149
D LC NG+ A K+F M+ + P NL +++ + G C +GR +DA + +
Sbjct: 595 DGLCRNGRTGLAFKIFHEMEKRNYFP-----NLYTYSSLIYGLCQEGRAEDAEMYNLLAR 649
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY-GLLMDACFEVN 208
+ Y C P+ ++ L+ LC G EA++L M KG+ P E Y LL+ C +
Sbjct: 650 LTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNL- 708
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYK 267
+V+ F M G + +L+ Y L+ L + ++EA+ F M+ K D+ +
Sbjct: 709 KVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWT 768
Query: 268 FMMKALSDGGKLDEILEIV 286
++ L G+ D L+++
Sbjct: 769 VLLDGLLKEGETDLCLKLL 787
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 109/244 (44%), Gaps = 11/244 (4%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+A S++ C N D A +FDRM + P N +++ + +G C +GR ++
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDP-----NSVTYSTLINGLCSEGRLEE 290
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+++ +M + P ++ + LC G +EA EL G+M +G P+ T+ L+
Sbjct: 291 AMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALIS 350
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMD 262
+ + + KM+ GL P YN L+ +L G + A + F M+ +
Sbjct: 351 GLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLP 410
Query: 263 DA-SYKFMMKALSDGGKLDEILEIVGGILDDGG----IEFSEELQEFVK-GELSKEGREE 316
+Y ++K G + + + I +L G I ++ + + K G L+ R
Sbjct: 411 STQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLL 470
Query: 317 EVVK 320
E++K
Sbjct: 471 EIMK 474
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 139/335 (41%), Gaps = 40/335 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V V Y+ L+ +G + F +F+ + G + Y ++K + +
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSH--GSLPSTQTYNEIIKCFCLM 425
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
G ++AM +++ + SS + + N+++ C G + A++L + MK P
Sbjct: 426 GDIQKAMVIFDKMLKAGSSP--NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAW 483
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
++ N ++ + DGY + DA+ +F KM
Sbjct: 484 TYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM 543
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E P + ++N +I K ++EAE G+M +G+ P+ TY +D R
Sbjct: 544 VESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRT 603
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM----DDASY 266
F +M PNL Y+ L+ L Q G ++A+ ++++ + + +Y
Sbjct: 604 GLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE-MYNLLARLTHYGCEPNVDTY 662
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
++K L G+ E ++V + G++ SEE+
Sbjct: 663 TTLVKGLCGEGRCYEADQLVVS-MQKKGLQPSEEI 696
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY-GLLM 201
A +++ KM P L+FN +I+ LCK G + EA+ + + P+ +TY L++
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LK 260
C N +D F +MV G PN Y+ L+ L G L+EA + MV+K ++
Sbjct: 246 GHCRNHN-LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIE 304
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
+Y + +L D G E +E++G + G + + + G LS++G+ E +
Sbjct: 305 PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISG-LSRDGKFEIAIG 363
Query: 321 LMEK 324
L K
Sbjct: 364 LYHK 367
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 10/230 (4%)
Query: 98 GKFDE---ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
GKFD A ++ +M N P L +FN M + C +GR ++A + + Y
Sbjct: 178 GKFDMVDLARDMYIKMLNSGIRPSLL-----TFNTMINILCKKGRVQEAKLIMSHIFRYD 232
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
P+ ++ +LI C+N L A ++ M G +P+ TY L++ R+++
Sbjct: 233 AYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAM 292
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKAL 273
+MV G+ P + Y + L G EA M K+ + + ++ ++ L
Sbjct: 293 DMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGL 352
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
S GK + + + +L DG + + + +L EGR E + +
Sbjct: 353 SRDGKFEIAIGLYHKMLADGLVPTTVTYNALI-NQLCVEGRFETAFTIFK 401
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 134/285 (47%), Gaps = 14/285 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D ++ L+ + GD G+ +LF +++ V + V YG L+KG G +A+
Sbjct: 136 DTSAFNTLLDALAQAGDLPGMTQLFASMRD--ASVRPNVVTYGILVKGLCKAGRVGDALS 193
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKRLAVNLGSF 127
+ G S V V N+++D LC G+ +A+K +RM++ H A N ++
Sbjct: 194 VLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHG----CAPNTVTY 249
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N +A +C G A E+ KM + R +P+ ++ N ++ LC G + A E + E
Sbjct: 250 NCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFRE--K 307
Query: 188 KGVNP----DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ V P + TY L+ A N V F +MVD G P+ +Y ++ L Q G
Sbjct: 308 RTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAG 367
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVG 287
LD+A S M K ++D +Y ++ +L+E E++G
Sbjct: 368 RLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLG 412
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 8/277 (2%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V + ++ G G F E + + V Y +L+ + AME +
Sbjct: 282 VTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELF 341
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+E V E +S A+ +++ L G+ D+A + MK ++ ++N++
Sbjct: 342 HEMVDEGNSP--DAIMYFTMISGLTQAGRLDDAWSMATSMKKAG-----FQLDAKAYNIL 394
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G+C + R +A E+ +M E PD ++N L+ LCK G +EL G+M D G
Sbjct: 395 IGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGC 454
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P T+G L+ +V ++D+ FR M +SG++PN +YN L+ L + A
Sbjct: 455 RPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIE 514
Query: 251 FFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIV 286
FD M K + + ++ ++K L D ++ E++
Sbjct: 515 LFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELM 551
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 10/257 (3%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
++SV+ + V ++ LC G+ +AL + D M P + ++ N + DG C
Sbjct: 164 RDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSG---PESDVCPDVVMLNNIVDGLC 220
Query: 136 GQGRFKDAIEVF--RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD 193
GR + A++ R + C+P+T+++N L C+ G + A EL +M + V P+
Sbjct: 221 KTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPN 280
Query: 194 EYTYGLLMDACFEVNRVDDGATYFR--KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
T ++ V RV +FR + V R N Y+ LVG + + A
Sbjct: 281 AVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMEL 340
Query: 252 FDIMVKKLKMDDASYKF-MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELS 310
F MV + DA F M+ L+ G+LD+ + + G + + + G
Sbjct: 341 FHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATS-MKKAGFQLDAKAYNILIGGFC 399
Query: 311 KEGREEEVVKLM-EKKE 326
+ R E +L+ E KE
Sbjct: 400 RRKRLNEAYELLGEMKE 416
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 10/273 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V YS L+ F+ + LF E+ ++ G D ++Y +++ G G ++A
Sbjct: 319 VTYSTLVGAFLHTNNVGVAMELFHEMVDE--GNSPDAIMYFTMISGLTQAGRLDDAWSMA 376
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + ++ A A N ++ C + +EA +L MK P ++ ++N +
Sbjct: 377 TSM--KKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQP-----DVYTYNTL 429
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C G F E+ KM + C P ++F LI CK G + EA ++ M + G+
Sbjct: 430 LSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGI 489
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ Y L+D + F +M + + N+ +N L+ L M ++A
Sbjct: 490 QPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFE 549
Query: 251 FFDIMVK-KLKMDDASYKFMMKALSDGGKLDEI 282
D+M + + D + +M+ L G+ D +
Sbjct: 550 LMDLMREGRCTPDYVTIDILMEWLPVIGETDRL 582
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 9/252 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D ++Y ++ G + G D + + +K+ G D Y L+ G+ +
Sbjct: 344 MVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKK--AGFQLDAKAYNILIGGFCRR 401
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA E E + + ++ N++L LC G F +L +M + P
Sbjct: 402 KRLNEAYELLGEM--KEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRP--- 456
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +F + GYC G+ +A+ +FR M E P+T+ +N LID LCK+ + A E
Sbjct: 457 --SVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIE 514
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM +K V + T+ L+ + N + M + P+ + L+ L
Sbjct: 515 LFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLP 574
Query: 241 QVGMLDEAKSFF 252
+G D K F
Sbjct: 575 VIGETDRLKHFM 586
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 6/183 (3%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
PDT +FN L+D L + G L +L+ M D V P+ TYG+L+ + RV D +
Sbjct: 134 PPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALS 193
Query: 216 YFRKM--VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK---MDDASYKFMM 270
M +S + P++ + N +V L + G L +A F + ++ + + +Y +
Sbjct: 194 VLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLA 253
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKA 330
A G + E+V + + + L V G L GR ++ +K
Sbjct: 254 HAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGG-LCWVGRVGAALEFFREKRTVWP 312
Query: 331 EAK 333
EA+
Sbjct: 313 EAR 315
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 49/327 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDS-DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
GFV D YS + +GF+ + + F LF+E+K GVV D Y L+ + G+
Sbjct: 484 GFVPDTSTYSEV-IGFLCNASRVENAFFLFKEMKGT--GVVPDVYTYTILIDCFSKAGII 540
Query: 64 EEAMECYNEAV--GENSSV-------------KMSAVAN------------------NSV 90
++A +E V G +V K +VAN ++
Sbjct: 541 KQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTAL 600
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPP---------KRLA--VNLGSFNVMADGYCGQGR 139
+D C +G ++A +++ RM+ + + P +A N+ ++ + DG C +
Sbjct: 601 IDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHK 660
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
KDA ++ M C P+T+ ++ LID CK L EA+E++ +M + G NP+ YTY
Sbjct: 661 VKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSS 720
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
L+D F+ R+D KM+++ PN+ +Y ++ L +V DEA +M +K
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEI 285
K + +Y M+ GK+D+ LE+
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLEL 807
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 119/275 (43%), Gaps = 33/275 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG-------------------DSDGVFRLFEELKEKLG 41
M KG + + Y+ L+ G+ + G D D F++ + EK
Sbjct: 585 MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK-P 643
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
VV+ G + L K + +K + + + N+ + ++++D C K D
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNT------IVYDALIDGFCKAAKLD 697
Query: 102 EALKLFDRM-KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
EA ++F +M ++ +NP N+ +++ + D R ++V KM E C+P+ +
Sbjct: 698 EAQEVFHKMVEHGYNP------NVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIV 751
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+ +ID L K EA +L M +KG P+ TY ++D + +VD FR+M
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM 811
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
G PN Y L+ G LDEA + + M
Sbjct: 812 GSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 125/286 (43%), Gaps = 22/286 (7%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ +++ LFE + K G + + Y +L+ GY G E+A + Y
Sbjct: 560 VTYTTLIHAYLKAKKVSVANELFELMIAK--GCFPNVITYTALIDGYCKSGNIEKACQIY 617
Query: 71 NEAVGE--------------NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
G+ N + K + V +++D LC K +A L + M +
Sbjct: 618 ARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCE 677
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P + ++ + DG+C + +A EVF KM E+ +P+ ++++LID+L K+ L
Sbjct: 678 PNTIV-----YDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLD 732
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++ +M + P+ Y ++D +V + D+ M + G +PN+ Y ++
Sbjct: 733 LVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMI 792
Query: 237 GKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
+ G +D+ F M K + +Y ++ G LDE
Sbjct: 793 DGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDE 838
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 4/223 (1%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM--ADG 133
E K V N ++ ++C+ G+ + F+ + +N L NV+ A
Sbjct: 405 EKCECKPGYVVYNILIGSICSGGELPGPVT-FELAEKAYNEMLSAGTVLNKVNVVSFARC 463
Query: 134 YCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD 193
CG G+F+ A +V +M PDT +++ +I LC + A L+ EM GV PD
Sbjct: 464 LCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPD 523
Query: 194 EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
YTY +L+D + + + +MV G P + Y L+ ++ + A F+
Sbjct: 524 VYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 583
Query: 254 IMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+M+ K + +Y ++ G +++ +I + D I
Sbjct: 584 LMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADI 626
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 115/275 (41%), Gaps = 11/275 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELK--EKLGGVVSDGVVYGSLMKGYF 58
M +G +++ L+ + + D ++L ++++ E G V ++ GS+ G
Sbjct: 369 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 428
Query: 59 MKG--MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+ G E A + YNE + + + V S LC GKF++A K+ M
Sbjct: 429 LPGPVTFELAEKAYNEMLSAGTVLNKVNVV--SFARCLCGFGKFEKAYKVIHEMMGNGFV 486
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P + +++ + C R ++A +F++M PD ++ LID K G++
Sbjct: 487 P-----DTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIK 541
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A EM G P TY L+ A + +V F M+ G PN+ Y L+
Sbjct: 542 QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALI 601
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMK 271
+ G +++A + M + D F +K
Sbjct: 602 DGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIK 636
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 130/318 (40%), Gaps = 48/318 (15%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGK 99
G + +VY +L+ G+ +EA E +++ V G N +V +S++D L + +
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNV----YTYSSLIDRLFKDKR 730
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
D LK+ +M P N+ + M DG + +A ++ M E C P+
Sbjct: 731 LDLVLKVLSKMLENSCAP-----NIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 785
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG------ 213
+++ +ID K G + + EL+ EM KG P+ TY +L++ C +D+
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845
Query: 214 --ATYFRKMVDS-------------------------GLRPNLAVYNRLVGKLVQVGMLD 246
TY+ K V S G P + +Y L+ V+ G L+
Sbjct: 846 MKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLE 905
Query: 247 EAKSFF-DIMVKKLKMDDAS--YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
A +++ + M Y ++ + S K+ E+ ++ DG I
Sbjct: 906 VALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVH 965
Query: 304 FVKGELSKEGREEEVVKL 321
+ G L + R EE ++L
Sbjct: 966 LLMG-LIRVRRWEEALQL 982
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 113/249 (45%), Gaps = 13/249 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+Y+ ++ G + +D ++L ++EK G + V Y +++ G+ G ++ +E +
Sbjct: 751 VIYTEMIDGLSKVAKTDEAYKLMLMMEEK--GCKPNVVTYTAMIDGFGKAGKVDKCLELF 808
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E + + V +++ C G DEA L + MK + P ++ S+ +
Sbjct: 809 REMGSKGCAPNF--VTYTVLINHCCATGHLDEAYALLEEMKQTYWPK-----HVSSYCKV 861
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+GY + F ++ + ++ + +P L + LID K G L A EL+ E+ +
Sbjct: 862 IEGY--KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASM 919
Query: 191 N--PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+ + Y L+ + +++ F M+ G+ P+L + L+ L++V +EA
Sbjct: 920 SMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEA 979
Query: 249 KSFFDIMVK 257
D + +
Sbjct: 980 LQLSDSLCQ 988
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
NV+ C G + A+E ++ ++ P +++N L+ + L A+ ++ EMS
Sbjct: 209 LNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS 268
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G++ DE+T G A +V + + + K PN +YN+++ L + +
Sbjct: 269 ELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFE 325
Query: 247 EAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
EA F + M + + +Y+ ++ + +L I+ ++ +G
Sbjct: 326 EAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEG 373
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 83/223 (37%), Gaps = 34/223 (15%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN------------------------ 123
N ++ C NG ++ AL+ R+K+ P R+ N
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269
Query: 124 LG------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
LG + A C G++++A+ + K P+T+ +N +I LC+ E
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDF---VPNTILYNKMISGLCEASFFEE 326
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A + M P+ TY +L+ C ++ M+ G P+ ++N LV
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386
Query: 238 KLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKL 279
+ A M K + K Y ++ ++ GG+L
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGEL 429
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 8/159 (5%)
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
ALC GK+ EAL L + K + P N +N M G C F++A++ +M
Sbjct: 285 ALCKVGKWREALSLIE--KEDFVP------NTILYNKMISGLCEASFFEEAMDFLNRMRS 336
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
C P+ ++ L+ L + + M +G P + L+ A + +
Sbjct: 337 TSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSY 396
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
+KM +P VYN L+G + G L +F
Sbjct: 397 AYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTF 435
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ L+LG R+ + D F +F+ + + G + V Y +L+ G +G EEAM+
Sbjct: 239 TYTSLILGHCRNHNLDLAFAMFDRMVKD--GCDPNSVTYSTLINGLCSEGRLEEAMDMLE 296
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E V + ++ + L +LC+ G EA++L +MK P N+ +F +
Sbjct: 297 EMVQK--GIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVP-----NIQTFTALI 349
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G G+F+ AI ++ KM P T+++N LI+QLC G A ++ M G
Sbjct: 350 SGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSL 409
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P TY ++ + + F KM+ +G PN+ YN L+ + G L+ A
Sbjct: 410 PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRL 469
Query: 252 FDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+IM LK D +Y ++ S GGKL+ + G+++ G
Sbjct: 470 LEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 10/276 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V + ++ L+ G RDG + L+ ++ G+V V Y +L+ ++G
Sbjct: 336 RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD--GLVPTTVTYNALINQLCVEGRF 393
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A + + S S N ++ C G +A+ +FD+M + P N
Sbjct: 394 ETAFTIFKWMLSHGSLP--STQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP-----N 446
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + GYC QG +A+ + M PD ++ LI + G L A L+
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + G++P+ TY ++D F + +VDD F KMV+SG P+ YN ++ +
Sbjct: 507 GMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTN 566
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
+ EA++F MVK+ L + +Y + L G+
Sbjct: 567 SISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGR 602
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 139/319 (43%), Gaps = 45/319 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ GF R G + LF + E G+ + V Y +++ GYF +
Sbjct: 477 GLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEH--GISPNHVTYTAIIDGYFNLAKVD 534
Query: 65 EAM---------------ECYNEAV-----------GENSSVKM-------SAVANNSVL 91
+A+ + YN + EN KM + + S +
Sbjct: 535 DALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA--IEVFRK 149
D LC NG+ A K+F M+ + P NL +++ + G C +GR +DA + +
Sbjct: 595 DGLCRNGRTGLAFKIFHEMEKRNYFP-----NLYTYSSLIYGLCQEGRAEDAEMYNLLAR 649
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY-GLLMDACFEVN 208
+ Y C P+ ++ L+ LC G EA++L M KG+ P E Y LL+ C +
Sbjct: 650 LTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNL- 708
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYK 267
+V+ F M G + +L+ Y L+ L + ++EA+ F M+ K D+ ++
Sbjct: 709 KVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWT 768
Query: 268 FMMKALSDGGKLDEILEIV 286
++ L G+ D L+++
Sbjct: 769 VLLDGLLKEGETDLCLKLL 787
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 109/244 (44%), Gaps = 11/244 (4%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+A S++ C N D A +FDRM + P N +++ + +G C +GR ++
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDP-----NSVTYSTLINGLCSEGRLEE 290
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+++ +M + P ++ + LC G +EA EL G+M +G P+ T+ L+
Sbjct: 291 AMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALIS 350
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMD 262
+ + + KM+ GL P YN L+ +L G + A + F M+ +
Sbjct: 351 GLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLP 410
Query: 263 DA-SYKFMMKALSDGGKLDEILEIVGGILDDGG----IEFSEELQEFVK-GELSKEGREE 316
+Y ++K G + + + I +L G I ++ + + K G L+ R
Sbjct: 411 STQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLL 470
Query: 317 EVVK 320
E++K
Sbjct: 471 EIMK 474
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 139/335 (41%), Gaps = 40/335 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V V Y+ L+ +G + F +F+ + G + Y ++K + +
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSH--GSLPSTQTYNEIIKCFCLM 425
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
G ++AM +++ + SS + + N+++ C G + A++L + MK P
Sbjct: 426 GDIQKAMVIFDKMLKAGSSP--NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAW 483
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
++ N ++ + DGY + DA+ +F KM
Sbjct: 484 TYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM 543
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E P + ++N +I K ++EAE G+M +G+ P+ TY +D R
Sbjct: 544 VESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRT 603
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM----DDASY 266
F +M PNL Y+ L+ L Q G ++A+ ++++ + + +Y
Sbjct: 604 GLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE-MYNLLARLTHYGCEPNVDTY 662
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
++K L G+ E ++V + G++ SEE+
Sbjct: 663 TTLVKGLCGEGRCYEADQLVVS-MQKKGLQPSEEI 696
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY-GLLM 201
A +++ KM P L+FN +I+ LCK G + EA+ + + P+ +TY L++
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LK 260
C N +D F +MV G PN Y+ L+ L G L+EA + MV+K ++
Sbjct: 246 GHCRNHN-LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIE 304
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
+Y + +L D G E +E++G + G + + + G LS++G+ E +
Sbjct: 305 PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISG-LSRDGKFEIAIG 363
Query: 321 LMEK 324
L K
Sbjct: 364 LYHK 367
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 10/230 (4%)
Query: 98 GKFDE---ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
GKFD A ++ +M N P L +FN M + C +GR ++A + + Y
Sbjct: 178 GKFDMVDLARDMYIKMLNSGIRPSLL-----TFNTMINILCKKGRVQEAKLIMSHIFRYD 232
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
P+ ++ +LI C+N L A ++ M G +P+ TY L++ R+++
Sbjct: 233 AYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAM 292
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKAL 273
+MV G+ P + Y + L G EA M K+ + + ++ ++ L
Sbjct: 293 DMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGL 352
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
S GK + + + +L DG + + + +L EGR E + +
Sbjct: 353 SRDGKFEIAIGLYHKMLADGLVPTTVTYNALI-NQLCVEGRFETAFTIFK 401
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 142/325 (43%), Gaps = 12/325 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V D + Y+ L+ GF + D +L + + K G V YGS++ G+
Sbjct: 204 MVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK--GPEPTAVTYGSIVHGFCKL 261
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M EA E + + S+L + G+ +EA ++ M P +
Sbjct: 262 DMINEAKEVIAQM--RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVI 319
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ + D GR +A VF M E C+PD L++ +I K G + A E
Sbjct: 320 L-----YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGE 374
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M+ GV PD + Y LMD ++ RVD + +MV SG++PN +N L+ L
Sbjct: 375 ILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLF 434
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA--SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ G D A S F M++K ++ SY ++ L G++ E ++D G I
Sbjct: 435 KDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPEC 494
Query: 299 EELQEFVKGELSKEGREEEVVKLME 323
+ L+K GR E KL+E
Sbjct: 495 HTYTSLIY-SLAKAGRIPEAKKLVE 518
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 13/249 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + ++ L+ GF + G +L L + L D +Y S++ GY
Sbjct: 33 MIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL---LNQALKRFRPDVFLYTSVIHGYCKA 89
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + Y AV +S + ++ +V+ L ++ + DEA +LF+ +K P
Sbjct: 90 GDLDTG---YFRAVTPKAS--LDVISYTTVIKGLADSKRIDEACELFEELKTAGCSP--- 141
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + DG GR +D ++ F +M C P ++ +ID LCK ML +A +
Sbjct: 142 --NVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACK 199
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M KG PD TY L+D + +++D+ M+ G P Y +V
Sbjct: 200 VFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFC 259
Query: 241 QVGMLDEAK 249
++ M++EAK
Sbjct: 260 KLDMINEAK 268
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 131/280 (46%), Gaps = 11/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D ++Y+ L+ G +F+ + EK G D + YG++++ +
Sbjct: 309 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK--GCAPDALTYGTIIQNFSKI 366
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A E + S V A NS++D + D+A ++DRM P
Sbjct: 367 GNVEAAGEILE--LMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP--- 421
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL-SFNNLIDQLCKNGMLAEAE 179
N +FNV+ G G+ A +F++M E P TL S+ LID L K G ++EA
Sbjct: 422 --NAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAF 479
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ EM D+G+ P+ +TY L+ + + R+ + MV G+ P++ Y+ L+ L
Sbjct: 480 LQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 539
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
+ M+D A F M+K+ ++ +YK + + G+
Sbjct: 540 IDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 579
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 15/253 (5%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+P + SY ++ G D ++ F + + G D + + +L+ G+ G +
Sbjct: 3 CEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDN--GCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
+ N+A+ + SV+ C G D + R PK ++++
Sbjct: 61 GHKLLNQAL---KRFRPDVFLYTSVIHGYCKAGDLDTG---YFRAVT----PKA-SLDVI 109
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
S+ + G R +A E+F ++ CSP+ +++ +ID L K G + + + + EM
Sbjct: 110 SYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEM 169
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
S P TY +++D + + D F +MV G P+ Y L+ + +
Sbjct: 170 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 229
Query: 246 DEAKSFFDIMVKK 258
DEA+ D+M+ K
Sbjct: 230 DEARKLLDVMLTK 242
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C P +S+N +I L + EA + + M D G PD + L+ + + G
Sbjct: 3 CEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG- 61
Query: 215 TYFRKMVDSGL---RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMK 271
K+++ L RP++ +Y ++ + G LD +F + K +D SY ++K
Sbjct: 62 ---HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTG--YFRAVTPKASLDVISYTTVIK 116
Query: 272 ALSDGGKLDEILEI 285
L+D ++DE E+
Sbjct: 117 GLADSKRIDEACEL 130
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 149/313 (47%), Gaps = 37/313 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-VYGSLMKGYFM 59
M KG D V Y ++ G + GD+D F L ++++ G + GV +Y +++ G
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQ---GKLEPGVLIYTTIIDGLCK 268
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNP-- 116
++A+ + E E ++ + V +S++ LCN G++ +A +L D ++ + NP
Sbjct: 269 NKHMDDALNLFKEM--ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 117 ---------------------------PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+ + ++ +++ + +G+C R +A ++F
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M C PD +S++ LI CK + E EL+ EMS +G+ + TY L+ F+
Sbjct: 387 MVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGD 446
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKF 268
D F++MV G+ PN+ YN L+ L + G L++A F+ + + K++ +Y
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 269 MMKALSDGGKLDE 281
M++ + GK+++
Sbjct: 507 MIEGMCKAGKVED 519
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K D V YS L+ GF + D LF E+ ++ G+V + V Y +L++G F
Sbjct: 387 MVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQR--GLVGNTVTYTTLIQGLFQA 444
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A E + E V + V + + N++LD LC NGK ++A+ +F+ ++ P
Sbjct: 445 GDCDMAQEIFKEMVSDG--VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP--- 499
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++N+M +G C G+ +D ++F + PD +++N +I C+ G EA+
Sbjct: 500 --TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG-----ATYFRKMVDSGLRPNLAVYNRL 235
L+ EM + G P+ Y L+ A R+ DG A ++M G + + L
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRA-----RLRDGDREASAELIKEMRSCGFAGDASTIG-L 611
Query: 236 VGKLVQVGMLDEAKSFFDIM 255
V ++ G LD KSF D++
Sbjct: 612 VTNMLHDGRLD--KSFLDML 629
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 130/282 (46%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ + V S L+ G+ L +++ + G + V + +L+ G F+
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF--VTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ + V + + V V++ LC G D A L ++M+ P L
Sbjct: 204 EAVALIDRMVAKGCQPDL--VTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLI--- 258
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ + DG C DA+ +F++M P+ +++++LI LC G ++A L +
Sbjct: 259 --YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++ +NPD +T+ L+DA + ++ + + +MV + P++ Y+ L+
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 245 LDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI 285
LDEAK F+ MV K D SY ++K ++DE +E+
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMEL 418
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 11/230 (4%)
Query: 9 DP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP V YS L+ GF D ++FE + K D V Y +L+KG+ +E
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK--HCFPDVVSYSTLIKGFCKAKRVDEG 415
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
ME + E + + V +++ L G D A ++F M ++ PP N+ +
Sbjct: 416 MELFREM--SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPP-----NIMT 468
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + DG C G+ + A+ VF + + P ++N +I+ +CK G + + +L+ +S
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
KGV PD Y ++ ++ F++M + G PN YN L+
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 6/204 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S + + +L A+ KFD + L ++M+N P N +++++ + +C + +
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPH-----NHYTYSILINCFCRRSQLPL 134
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ V KM + P+ ++ ++L++ C + ++EA L +M G P+ T+ L+
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKM 261
F N+ + +MV G +P+L Y +V L + G D A + M + KL+
Sbjct: 195 GLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEP 254
Query: 262 DDASYKFMMKALSDGGKLDEILEI 285
Y ++ L +D+ L +
Sbjct: 255 GVLIYTTIIDGLCKNKHMDDALNL 278
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 6/197 (3%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ DA+ +F +M + R P + F+ L+ + K L +M + G+ + YTY
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VK 257
+L++ +++ KM+ G PN+ + L+ + EA + D M V
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 258 KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKGELSKEGRE 315
+ + ++ ++ L K E + ++ ++ G +L + V L K G
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGC---QPDLVTYGVVVNGLCKRGDT 237
Query: 316 EEVVKLMEKKEREKAEA 332
+ L+ K E+ K E
Sbjct: 238 DLAFILLNKMEQGKLEP 254
>gi|255661012|gb|ACU25675.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 376
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 116/231 (50%), Gaps = 9/231 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V + E +K+ G + D + YG L+ G+ G +++
Sbjct: 62 FNIMMRGLFDNGKVDEVISILELMKKS--GFIEDSITYGILVHGFCKNGYINKSLHVLE- 118
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ E + A A +++++ LC K D+A+ + + M P N +N + +
Sbjct: 119 -IAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKP-----NAHVYNALIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G +F+DA+ V R+MG CSP ++++ LI+ LCK EA +L EM +KG+NP
Sbjct: 173 GLVGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEMLZKGLNP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
TY LLM ++V+ ++ G +P++ ++N L+ L VG
Sbjct: 233 SVITYSLLMKGLCLGHKVEMALQLXNQVTSKGFKPDVQMHNILIHGLCSVG 283
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 22/284 (7%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+++E+ E V D VVY +++ G+F G ++ E + E +G S S
Sbjct: 4 GDIDGAERVYKEIVES--KVSPDAVVYNAMLNGFFRVGRIKDCFELW-EMMGREGS--RS 58
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ N ++ L +NGK DE + + + MK + ++ ++ G+C G +
Sbjct: 59 VASFNIMMRGLFDNGKVDEVISILELMKKSGFIEDSI-----TYGILVHGFCKNGYINKS 113
Query: 144 IEVF----RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+ V RK G D +++ +I+ LCK L +A + M G P+ + Y
Sbjct: 114 LHVLEIAERKGGVL----DAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNA 169
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
L++ ++ +D R+M + P L Y+ L+ L +V EA M++K
Sbjct: 170 LINGLVGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEMLZKG 229
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L +Y +MK L G K++ L++ + G F ++Q
Sbjct: 230 LNPSVITYSLLMKGLCLGHKVEMALQLXNQVTSKG---FKPDVQ 270
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 128/291 (43%), Gaps = 45/291 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF+ D + Y L+ GF ++G + + E + E+ GGV+ D Y +++ G + +
Sbjct: 89 GFIEDSITYGILVHGFCKNGYINKSLHVLE-IAERKGGVL-DAFAYSAMINGLCKEAKLD 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ N + S K +A N++++ L KF++A+++ M + P L
Sbjct: 147 KAVSVLNGMI--KSGCKPNAHVYNALINGLVGASKFEDAVRVVREMGTTNCSP-----TL 199
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF---------------------- 162
+++ + +G C RF +A ++ ++M Z +P +++
Sbjct: 200 VTYSTLINGLCKVERFGEAYDLVKEMLZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQ 259
Query: 163 -------------NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
N LI LC G A LY +M+ P+ T+ LM+ ++ +
Sbjct: 260 VTSKGFKPDVQMHNILIHGLCSVGKTQLALLLYLDMNRWNCAPNLVTHNTLMEGFYKDDD 319
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKL 259
+ + + +++ +GL+P++ YN + L + +A F D + KK+
Sbjct: 320 IRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISDAILFLHDAVTKKI 370
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++++V+S + P+ VYN ++ +VG + + +++M ++ AS+ M
Sbjct: 6 IDGAERVYKEIVESKVSPDAVVYNAMLNGFFRVGRIKDCFELWEMMGREGSRSVASFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D GK+DE++ I+ + G IE S V G K G + + ++E ER+
Sbjct: 66 MRGLFDNGKVDEVISILELMKKSGFIEDSITYGILVHG-FCKNGYINKSLHVLEIAERK 123
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++++ E + SPD + +N +++ + G + + EL+ M +G +
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGFFRVGRIKDCFELWEMMGREG-SRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +VD+ + M SG + Y LV + G ++++ +I
Sbjct: 60 ASFNIMMRGLFDNGKVDEVISILELMKKSGFIEDSITYGILVHGFCKNGYINKSLHVLEI 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+K + DA +Y M+ L KLD+ + ++ G++ G
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSG 159
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 139/280 (49%), Gaps = 15/280 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGFV D Y L+ G +DGD D +F E EK G+ + V+ +L+KG +G+
Sbjct: 349 KGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEK--GLKPNLVLCNTLVKGLSQQGLI 406
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKL-FDRMKNEHNPPKRLAV 122
+A++ NE S + N V++ LC G +A L D + H P
Sbjct: 407 LQALKLMNEMSENGCSPDIWTY--NLVINGLCKIGCVSDADNLVIDAIAKGHLP------ 458
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ +FN + DGYC + + +AIE+ +M + SPD +++N++++ LCK G + +
Sbjct: 459 DVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTF 518
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M +KG P+ TY +L ++ + +V++ +M + GL P++ + L+
Sbjct: 519 KLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDN 578
Query: 243 GMLDEAKSFFDIMVKKLKMDD--ASYKFMMKALSDGGKLD 280
G LD A F + ++ K A+Y M+ A + GKL+
Sbjct: 579 GDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFA--GKLN 616
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 135/291 (46%), Gaps = 11/291 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V D ++ M F R RL + + G S V Y +++ G++ +
Sbjct: 140 KGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQ--GCESSAVAYCTVIGGFYEENHR 197
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E + E +G + +A N ++ LC G E+ +L +++ P N
Sbjct: 198 VEAHELFEEMLG--LGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSP-----N 250
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L + N+ G+C + +AI + +G +PD +++N LI LCKN + EAE
Sbjct: 251 LFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLR 309
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M ++G PD +TY ++D ++ + + R G P+ + Y L+ L Q G
Sbjct: 310 KMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDG 369
Query: 244 MLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+D A + F+ M K LK + ++K LS G + + L+++ + ++G
Sbjct: 370 DIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENG 420
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 139/288 (48%), Gaps = 18/288 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEE---LKEKLG-GVVSDGVVYGSLMKGYFM 59
+G D + Y+ L+ G ++ F++ E L++ + G DG Y S++ GY
Sbjct: 279 RGLTPDVITYNTLICGLCKN------FKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCK 332
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
GM + A + + + S S+++ LC +G D A+ +F+ K
Sbjct: 333 LGMMQNADQILRDGAFKGFVPDESTYC--SLINGLCQDGDIDRAINVFNEAME-----KG 385
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L NL N + G QG A+++ +M E CSPD ++N +I+ LCK G +++A+
Sbjct: 386 LKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDAD 445
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L + KG PD +T+ L+D + ++D+ +M + G+ P++ YN ++ L
Sbjct: 446 NLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGL 505
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIV 286
+ G ++ F +M++K + + +Y + ++ K++E L ++
Sbjct: 506 CKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLI 553
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 123/256 (48%), Gaps = 10/256 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + D ++ L+ G+ + D + + + GV D + Y S++ G G
Sbjct: 454 KGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNH--GVSPDVITYNSILNGLCKAGKY 511
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+ M + + + E V + + N + ++ C K +EAL L + M+N K L +
Sbjct: 512 EDVMGTF-KLMMEKGCVP-NIITYNILTESFCKARKVEEALNLIEEMQN-----KGLTPD 564
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGE-YRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ +F + G+C G A ++F+++ E Y+ S ++N +I+ + AE+L+
Sbjct: 565 VVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLF 624
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M + G +PD YTY +++D + ++ G ++ ++ GL P+L + R++ L
Sbjct: 625 NKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLK 684
Query: 243 GMLDEAKSFFDIMVKK 258
+ EA +MV K
Sbjct: 685 RRVHEAVGIIHLMVHK 700
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 8/227 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M+ G D + Y+ ++ G + G + V F+ + EK G V + + Y L + +
Sbjct: 486 MWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEK--GCVPNIITYNILTESFCKA 543
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA+ E +N + V +++ C+NG D A +LF R+ ++ +
Sbjct: 544 RKVEEALNLIEEM--QNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQY----KF 597
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ + ++N+M + + G+ A ++F KM E SPD+ ++ +ID CK G +
Sbjct: 598 SHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYS 657
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
+KG+ P T+G +++ RV + MV G+ P
Sbjct: 658 FLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVP 704
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 2/191 (1%)
Query: 134 YCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD 193
Y +G+ ++A++VF +M + C P S+N +++ L + +A ++Y M DKG+ PD
Sbjct: 86 YGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPD 145
Query: 194 EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
YT+ + M + +R M G + Y ++G + EA F+
Sbjct: 146 VYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFE 205
Query: 254 IMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE 312
M+ + D ++ ++ L G + E ++ +L G + F++G +
Sbjct: 206 EMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQG-FCQR 264
Query: 313 GREEEVVKLME 323
E ++L++
Sbjct: 265 AMLNEAIRLLD 275
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V +LM GY G +
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSXNTLMNGYIRLGDLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++V S V+ + +++ LC K D+A + FD M K L N
Sbjct: 195 EGFRL--KSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEML-----VKGLVPNG 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A E++++M PD +++N LI LCK G L +A +L +
Sbjct: 248 VTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDD 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+B C + +D + ++M+ +R + VY L+ L Q G
Sbjct: 308 MSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGR 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ +LK D +Y ++ G
Sbjct: 368 SVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKG 401
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D F+E+ K G+V +GV + +L+ G+
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVK--GLVPNGVTFTTLIDGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A E Y + + + S+ + N+++ LC G +A L D M + P ++
Sbjct: 261 GRVDLAKEIYKQMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKI 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + BG C +G A E ++M + D + + LI LC+ G +AE+
Sbjct: 319 -----TYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM + PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 374 MLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 429
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 99/202 (49%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG V + V ++ L+ G ++G D +++++ + ++ D + Y +L+ G K
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQ--SLLPDLITYNTLIYGLCKK 295
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A + ++ +K + +++B C G D A + RM E+ +
Sbjct: 296 GDLKQAHDLIDDM--SMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQEN-----I 348
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + + G C +GR DA ++ R+M R PDT ++ +I++ CK G + + +
Sbjct: 349 RLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSK 408
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L EM G P TY +LM+
Sbjct: 409 LLKEMQRDGHAPSVVTYNVLMN 430
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 100/252 (39%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM---KNEHNPPKRLAVNLGS------- 126
NS+ + + + +++ LC + F EA L + K + + A L +
Sbjct: 12 NSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASXVFAAILETKGTQRSD 71
Query: 127 ---FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 72 IYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYE 131
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP++ N L+ +++G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLG 191
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE +M+ ++ D +Y ++ L K+D+ E +L G +
Sbjct: 192 DLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFT 251
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 252 TLIDGH-CKNGR 262
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 12/299 (4%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
VKG D ++ L+ + GD RLFEE+K G D V Y +L+ G
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS--GCTPDEVTYNTLIDNLCSLGK 441
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A++ + E++ S + N+++D LC + +EA ++FD+M + ++
Sbjct: 442 LGKALDLLKDM--ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG-----ISR 494
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +FN + DG C + DA + +M P+ +++N+++ CK G + +A ++
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M+ G D TYG L++ + R R M G+RP YN ++ L +
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSD-GGKLDEILEIVGGILDDGGI-EFS 298
+ +A S F M + + DA +YK + + L GG + E + + ++D G I EFS
Sbjct: 615 NNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 137/284 (48%), Gaps = 12/284 (4%)
Query: 9 DPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP V++Y ++ ++G + + ++ ++ G + D + +L+ EEA
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR--GCLPDITTFNTLIAALCTGNRLEEA 375
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
++ + + S + N +++ALC G AL+LF+ MKN P + +
Sbjct: 376 LDLARQVTVKGVSPDVYTF--NILINALCKVGDPHLALRLFEEMKNSGCTPDEV-----T 428
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + D C G+ A+++ + M C T+++N +ID LCK + EAEE++ +M
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+G++ + T+ L+D + ++DD +M+ GL+PN YN ++ + G +
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
+A + M ++D +Y ++ L G+ L+++ G+
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 143/318 (44%), Gaps = 11/318 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V ++ LM R + EE+ + GV D + +LM+G+ +
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSR--GVAPDETTFTTLMQGFVEE 229
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A+ + S + V N +++ C G+ ++AL + + P ++
Sbjct: 230 GSIEAALRVKARMLEMGCSA--TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N +G C A++V M + PD ++N +++ LCKNG L EA+
Sbjct: 288 -----TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKG 342
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +M D+G PD T+ L+ A NR+++ R++ G+ P++ +N L+ L
Sbjct: 343 ILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALC 402
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+VG A F+ M D+ +Y ++ L GKL + L+++ + G +
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTI 462
Query: 300 ELQEFVKGELSKEGREEE 317
+ G L K+ R EE
Sbjct: 463 TYNTIIDG-LCKKMRIEE 479
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 14/276 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG--GVVSDGVVYGSLMKGYFMKGM 62
G AD VVY++L L + +G +L E + ++G G+ D V + +LMK
Sbjct: 141 GIQADTVVYNHL-LNVLVEGSK---MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQ 196
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
A+ E + V +++ G + AL++ RM ++ V
Sbjct: 197 VRTAVLMLEEM--SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N V+ +GYC GR +DA+ ++ PD +++N ++ LC+N + A ++
Sbjct: 255 N-----VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVM 309
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M +G +PD +TY ++++ + ++++ +MVD G P++ +N L+ L
Sbjct: 310 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369
Query: 243 GMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGG 277
L+EA + VK + D ++ ++ AL G
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 41/256 (16%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E VK+ V +S LD+ FD+A+ D + N+ P + + +N + +
Sbjct: 103 EGHQVKLGVV--HSFLDSYEGQQLFDDAV---DLILNQLQPLFGIQADTVVYNHLLNVLV 157
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+ K V+ +MG PD ++FN L+ LC+ + A + EMS +GV PDE
Sbjct: 158 EGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDET 217
Query: 196 TYGLLMDACFE-----------------------------------VNRVDDGATYFRKM 220
T+ LM E + RV+D Y ++
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKL 279
+ G P+ YN V L Q + A D+MV++ D +Y ++ L G+L
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337
Query: 280 DEILEIVGGILDDGGI 295
+E I+ ++D G +
Sbjct: 338 EEAKGILNQMVDRGCL 353
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 131/270 (48%), Gaps = 14/270 (5%)
Query: 70 YNEAVGENSSVKMSAVANNS-----VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
Y+ V + + + VA+N ++++LC A+ + +M P +
Sbjct: 102 YSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSV---- 157
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + +G C +GR K+A+E+F +M P+T++F L+D LCK GM++EA ++
Sbjct: 158 -TFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFET 216
Query: 185 MSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M++KGV P+ YTY LM+ C + ++D + F MV G P++ Y+ L+ +
Sbjct: 217 MTEKGVEPNIYTYNALMNGYCLRL-EMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSR 275
Query: 244 MLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+DEAK+ M K+L + +Y +M+ L L E E+ + G +
Sbjct: 276 RIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYS 335
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAEA 332
+ G L K G EE +KL+ + K E
Sbjct: 336 ILLDG-LCKHGHLEEALKLLTSMQERKLEP 364
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 144/304 (47%), Gaps = 20/304 (6%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
+FE + EK GV + Y +LM GY ++ +A + + VG+ + +V + S+L
Sbjct: 213 VFETMTEK--GVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCA---PSVHSYSIL 267
Query: 92 -DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ C + + DEA L +M K L N ++N + G C +A E+F+KM
Sbjct: 268 INGYCKSRRIDEAKALLTQMSE-----KELIPNTVTYNTLMQGLCHASSLLEAQELFKKM 322
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
P+ +++ L+D LCK+G L EA +L M ++ + PD Y +L+ F ++
Sbjct: 323 CSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKL 382
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+ F K+ +G+RP++ YN ++ L++ G+ DEA F M D SY +
Sbjct: 383 EVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVI 442
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREK 329
++ ++++ ++ G FS + F K L E +E + + M RE
Sbjct: 443 IQGFLQNQDPSTAIQLIDEMV---GRRFSADSSTF-KMLLDLESHDEIISRFM----RES 494
Query: 330 AEAK 333
++ +
Sbjct: 495 SQIR 498
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
V+NNS N+ D+A+ F RM H P+ V LG F + ++ +
Sbjct: 58 VSNNS------NDIGIDDAMASFYRMI--HMNPRPSFVELGKF---LGSIAKKKQYSTVV 106
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
+ +M + + + + N LI+ LC+ + A + +M G+ PD T+ L++
Sbjct: 107 SLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGL 166
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
R+ + F +M PN + LV L + GM+ EA+ F+ M +K ++ +
Sbjct: 167 CNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNI 226
Query: 264 ASYKFMMKA------LSDGGKLDEIL 283
+Y +M ++D K+ EI+
Sbjct: 227 YTYNALMNGYCLRLEMNDASKVFEIM 252
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 144/312 (46%), Gaps = 9/312 (2%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D Y+ L+ GF G G RL E+ K V D + L+
Sbjct: 222 MVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMK-EDVRPDVYTFNILVDALCKL 280
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM EA + + ++ V+ N++++ C G EA ++FDRM P
Sbjct: 281 GMVAEARNVFGLMI--KRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLP--- 335
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ S++ + +GYC +A+ + +M + PDT+++N L+D L K+G + +
Sbjct: 336 --NVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWD 393
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G PD TY +L+D + +D F+ +VD+G+ PN+ YN L+ L
Sbjct: 394 LVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLC 453
Query: 241 QVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G + AK F ++ VK + + +Y M+ L G LDE ++ ++DDG +
Sbjct: 454 KGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAV 513
Query: 300 ELQEFVKGELSK 311
V+ L K
Sbjct: 514 TFDPLVRALLEK 525
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 123/271 (45%), Gaps = 44/271 (16%)
Query: 46 DGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK 105
D +LMKG +KG EA+ Y+ AV + S V ++++ LC GK +A++
Sbjct: 125 DPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFS--FDEVCYGTLINGLCKMGKTRDAIE 182
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADG-------------------------------- 133
L +M+ P NL +N++ DG
Sbjct: 183 LLRKMEKGGVRP-----NLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSL 237
Query: 134 ---YCGQGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+CG G+F+ A+ + +M + PD +FN L+D LCK GM+AEA ++G M +G
Sbjct: 238 IHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRG 297
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ PD + LM+ + + F +MV+ G PN+ Y+ L+ +V M+DEA
Sbjct: 298 LEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEAL 357
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
M ++ L D +Y ++ LS G++
Sbjct: 358 RLLTEMHQRNLVPDTVTYNCLLDGLSKSGRV 388
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 90/224 (40%), Gaps = 32/224 (14%)
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN----------------------- 123
++S L FD+A+ F RM + H PP +++N
Sbjct: 23 SHSPRKTLPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLD 82
Query: 124 --------LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
L + ++ + G+ A V K+ + D + L+ LC G
Sbjct: 83 SKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRT 142
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
EA LY KG + DE YG L++ ++ + D RKM G+RPNL +YN +
Sbjct: 143 FEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMV 202
Query: 236 VGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGK 278
V L + G++ EA MV K + +D +Y ++ G+
Sbjct: 203 VDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQ 246
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+ + G C +GR +A+ ++ S D + + LI+ LCK G +A EL +M
Sbjct: 128 TLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKM 187
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL-------------------- 225
GV P+ Y +++D + V + +MV G+
Sbjct: 188 EKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQF 247
Query: 226 ----------------RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
RP++ +N LV L ++GM+ EA++ F +M+K+ L+ D S
Sbjct: 248 QGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNA 307
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+M G + E E+ +++ G + + G + +E + L E +R
Sbjct: 308 LMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQR 366
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 149/281 (53%), Gaps = 10/281 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y L+ G + G D +RLFE++ + G ++ ++Y SL++ +FM G +
Sbjct: 449 RGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLD--AGHDANPIIYTSLIRNFFMHGRK 506
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+ + Y E + ++ + N+ +D + G+ ++ +F+ MK+ P +
Sbjct: 507 EDGHKIYKEMIRRGGRPDLTLL--NTYMDCVFKAGEVEKGRAIFEDMKSFGFLP-----D 559
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S++++ G G+ ++ +F+ M + + D ++N ++D LCK+G + +A E+
Sbjct: 560 VRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLE 619
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM K V+P TYG ++D +++R+D+ F + G+ N+ +Y+ L+ +VG
Sbjct: 620 EMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVG 679
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
+DEA + M+KK L + ++ +M AL ++DE L
Sbjct: 680 RIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEAL 720
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 129/291 (44%), Gaps = 43/291 (14%)
Query: 3 VKGFVADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
VKG +P V+Y+ + F + G D ++ F ELK G+ D V Y S++
Sbjct: 237 VKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAH--GLRPDDVSYTSMVWVLCKA 294
Query: 61 GMEEEAMECYNE---------AVGENSSVK------------------------MSAVAN 87
G EA E + + A N+ + S V+
Sbjct: 295 GRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSF 354
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
NS+L L K DEAL LFD MK + P N+ ++N++ D C GR +A ++
Sbjct: 355 NSILTCLGKKRKVDEALTLFDVMKKDAKP------NISTYNIIIDMLCMAGRVNEAYKIR 408
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M P+ LS N ++D+LCK L EA ++ S++G NP+ TY L+D +
Sbjct: 409 DEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKK 468
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
++DD F KM+D+G N +Y L+ G ++ + M+++
Sbjct: 469 GKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRR 519
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 137/286 (47%), Gaps = 18/286 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF+ D YS L+ G + G + +F+ + ++ G D Y +++ G G +
Sbjct: 555 GFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQ--GFALDARAYNAVVDGLCKSGKVD 612
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E E + V + S++D L + DEA LF+ K+ K + +N+
Sbjct: 613 KAYEVLEEM--KVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKS-----KGIELNV 665
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG+ GR +A + +M + +P+ ++N+L+D L K + EA +
Sbjct: 666 ILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQS 725
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + +P+ YTY +L++ V + + ++++M GL PN+ Y ++ L +VG
Sbjct: 726 MKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGN 785
Query: 245 LDEAKSFFDIMVKKLKM-----DDASYKFMMKALSDGGKLDEILEI 285
+ +A S F+ + K D AS+ +++ +S+ + E ++
Sbjct: 786 ITDAYSLFE----RFKTNGGIPDSASFNALIEGMSNANRPMEAYQV 827
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 139/293 (47%), Gaps = 11/293 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF D Y+ ++ G + G D + + EE+K K V YGS++ G
Sbjct: 586 MSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVK--HVHPTVATYGSIVDGLAKI 643
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA + EA ++ ++++ + +S++D G+ DEA + + M K L
Sbjct: 644 DRLDEAYMLFEEA--KSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMK-----KGL 696
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N + D +A+ F+ M E +CSP+T +++ LI+ LC+ +A
Sbjct: 697 TPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFV 756
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EM +G+ P+ TY ++ +V + D + F + +G P+ A +N L+ +
Sbjct: 757 FWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMS 816
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
EA F + ++ +++ + ++ AL+ L++ IVG +L +
Sbjct: 817 NANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQA-AIVGAVLSE 868
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 5/198 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ AL G+ + AL L D +K P ++ +NV D + G A + F
Sbjct: 215 TTLVRALAREGQMEPALALVDEVKGSCLEP-----DIVLYNVCIDCFGKAGSVDMAWKFF 269
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
++ + PD +S+ +++ LCK G L EAEEL+G+M + P Y Y ++
Sbjct: 270 HELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSA 329
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
R DD ++ + G P++ +N ++ L + +DEA + FD+M K K + ++Y
Sbjct: 330 ERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYN 389
Query: 268 FMMKALSDGGKLDEILEI 285
++ L G+++E +I
Sbjct: 390 IIIDMLCMAGRVNEAYKI 407
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 3/191 (1%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
R +DA V M + P ++ LI L + A EL +M D G +
Sbjct: 156 RLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFT 215
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVK 257
L+ A +++ ++ S L P++ +YN + + G +D A FF ++
Sbjct: 216 TLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAH 275
Query: 258 KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
L+ DD SY M+ L G+L E E+ G + + + + + G S E R ++
Sbjct: 276 GLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAE-RFDD 334
Query: 318 VVKLMEK-KER 327
KL+E+ +ER
Sbjct: 335 AYKLLERLRER 345
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 138/300 (46%), Gaps = 18/300 (6%)
Query: 37 KEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCN 96
K K G+V Y L++G+ A + ++E + N V + +A N++LDALC
Sbjct: 198 KAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDL--LAYNALLDALCK 255
Query: 97 NGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
+G D A K+F M N P + SF + YC A +V +M Y
Sbjct: 256 SGDVDGAYKMFQEMGNLGLKP-----DAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLV 310
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM----DACFEVNRVDD 212
P+ +FN++I LCKN + +A L EM KG NPD +TY +M D C EVNR
Sbjct: 311 PNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHC-EVNR--- 366
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMK 271
+M + P+ YN ++ L+++G D ++ M +K A+Y M+
Sbjct: 367 ATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMSERKFYPTVATYTVMIH 426
Query: 272 AL-SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKA 330
L GKL+E ++D+G +S + E ++ L G+ + V L K ER +
Sbjct: 427 GLVRKKGKLEEACRYFEMMIDEGIPPYSTTV-EMLRNRLVGWGQMDVVDVLAGKMERSSS 485
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 102/241 (42%), Gaps = 10/241 (4%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
V D + Y+ L+ + GD DG +++F+E+ G+ D + + Y A
Sbjct: 240 VVDLLAYNALLDALCKSGDVDGAYKMFQEMGNL--GLKPDAYSFAIFIHSYCDASDVHSA 297
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ + + + + N ++ LC N K D+A L D M + P + +
Sbjct: 298 YQVLDRM--KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANP-----DTWT 350
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + +C A ++ +M +C PD ++N ++ L + G E++ MS
Sbjct: 351 YNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMS 410
Query: 187 DKGVNPDEYTYGLLMDACFEVN-RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
++ P TY +++ ++++ YF M+D G+ P L +LV G +
Sbjct: 411 ERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQM 470
Query: 246 D 246
D
Sbjct: 471 D 471
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 1/161 (0%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F ++ Y +A F +M E+ P + L+ LC + A+E + +
Sbjct: 141 FWIVFRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAK 200
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G+ P TY +L+ + F +M+++ +L YN L+ L + G +D
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVD 260
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
A F M LK D S+ + + D + +++
Sbjct: 261 GAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVL 301
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 139/296 (46%), Gaps = 10/296 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+F G D ++ L+ G +G LF+++ + G +GV YG+L+ G
Sbjct: 135 IFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGE--GFQPNGVTYGTLIHGLCKV 192
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A+ V +N + + + N+++D L + + +EAL +F M K +
Sbjct: 193 GNSRAAIRLLRSMVQKNC--EPNVITYNTIIDCLFKDRQVNEALNIFSEMI-----AKGI 245
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ N+ ++N + G C +K + +M + + P+ + F L+D LCK GM+ A +
Sbjct: 246 SPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHD 305
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M +GV PD TY LMD + +D+ F MV G PN+ Y+ L+
Sbjct: 306 VVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYC 365
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
++ +D+A F+ M ++ L + +Y ++ L G+L + + + ++ G I
Sbjct: 366 KIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQI 421
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + Y+ ++ G + + V L E+ + ++ + V++ +L+ +
Sbjct: 240 MIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVD--SKIMPNVVIFTTLVDALCKE 297
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM A + + + V+ V +++D C + DEA K+FD M + P
Sbjct: 298 GMVTIAHDVVDVMI--QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAP--- 352
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ S++ + +GYC R A+ +F +M + P+ +++N LI LC G L +A
Sbjct: 353 --NVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM G PD TY +L+D + +D + + S L P++ YN ++ +
Sbjct: 411 LFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMC 470
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+VG L+ A F + K L D +Y M+ L G L E
Sbjct: 471 RVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAE 512
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 9/252 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + + YS L+ G+ + D LFEE+ ++ +V + V Y +L+ G
Sbjct: 345 MVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQR--ELVPNIVTYNTLIHGLCHV 402
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A+ ++E V + V +LD LC D+A+ + ++ + L
Sbjct: 403 GRLRDAIALFHEMVASGQIPDL--VTYRILLDYLCKTRHLDQAMAMLKAIEGSN-----L 455
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A ++ S+N++ DG C G + A ++F + PD ++ +I+ LC G+LAEA +
Sbjct: 456 APDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATK 515
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM+ G +PD+ TY L+ N ++M+ G + + +V L
Sbjct: 516 LFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLS 575
Query: 241 QVGMLDEAKSFF 252
G+ K
Sbjct: 576 DDGLDQSVKQIL 587
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 31/227 (13%)
Query: 96 NNGKFDEALKLFDRMKNEHNPPK---------------------RLAVNLGSFNVMADGY 134
N DEAL F+RM + PP L+ + S + +D Y
Sbjct: 51 NFNTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVY 110
Query: 135 ---------CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
C R V K+ + PDT +F LI LC G + EA L+ +M
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM 170
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+G P+ TYG L+ +V R MV PN+ YN ++ L + +
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQV 230
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
+EA + F M+ K + + ++Y ++ L + + ++ ++D
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVD 277
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 147/297 (49%), Gaps = 16/297 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE-KLGGVVSDGVVYGSLMKGYFMKGME 63
GFV D V Y+ L+ + G S E L+E ++ G V Y SL+ Y G+
Sbjct: 134 GFVPDKVTYNALLDVY---GKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLL 190
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAME N+ V + + ++L GK + A+++F M+ P N
Sbjct: 191 KEAMELKNQMV--EGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKP-----N 243
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN + + +G+F + ++VF ++ C PD +++N L+ +NGM +E ++
Sbjct: 244 ICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFK 303
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G P+ TY L+ A D +++M+++G+ P+L+ YN ++ L + G
Sbjct: 304 EMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGG 363
Query: 244 MLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEIL----EIVGGILDDGGI 295
+ ++++ F M + K ++ +Y ++ A ++G ++ +L EI G+++ +
Sbjct: 364 LWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAV 420
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 10/233 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D Y+ L+ V +G +F++++E+ G + Y ++ Y GM
Sbjct: 28 GFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE--GCKPTLITYNVILNVYGKMGMPW 85
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF-DEALKLFDRMKNEHNPPKRLAVN 123
++ E + +N+ V N+++ C G +EA +F MK+ P ++
Sbjct: 86 NKIKGLFEGM-KNAGVLPDEYTYNTLITC-CRRGSLHEEAAAVFKDMKSMGFVPDKV--- 140
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + D Y R K+A+EV R+M CSP +++N+LI ++G+L EA EL
Sbjct: 141 --TYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKN 198
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+M + G+N D +TY L+ + + F +M +G +PN+ +N L+
Sbjct: 199 QMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALI 251
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
A S++ A +NG++ EA+ +F +M+ E P L ++NV+ + Y G + I+
Sbjct: 35 AYTSLITACVSNGRYREAVMVFKKMEEEGCKP-----TLITYNVILNVYGKMGMPWNKIK 89
Query: 146 -VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE-AEELYGEMSDKGVNPDEYTYGLLMDA 203
+F M PD ++N LI C+ G L E A ++ +M G PD+ TY L+D
Sbjct: 90 GLFEGMKNAGVLPDEYTYNTLI-TCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDV 148
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMD 262
+ R + R+M +G P++ YN L+ + G+L EA + MV+ + +D
Sbjct: 149 YGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLD 208
Query: 263 DASYKFMMKALSDGGK 278
+Y ++ GK
Sbjct: 209 VFTYTTLLSGFVRAGK 224
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+L ++N + + F+ + EV +++ PDT+S+N +I C+NG + EA ++
Sbjct: 488 SLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIF 547
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM + G+ PD TY + + + +D R M+ G +PN YN +V +
Sbjct: 548 SEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKH 607
Query: 243 GMLDEAKSFFD 253
D+A F
Sbjct: 608 NHRDDAIMFIS 618
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 109/262 (41%), Gaps = 17/262 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF-- 58
M G D Y+ ++ R G + ++F E+K+ G + + Y SL+ Y
Sbjct: 340 MLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKD--GRCKPNELTYCSLLHAYANG 397
Query: 59 --MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+ M A E + + ++ + + V NS D L EA F +K +
Sbjct: 398 KEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLV------EAEVAFLELKRKGFS 451
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P +L + N M Y + F E+ M E +P ++N+L+ ++
Sbjct: 452 P-----DLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFE 506
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+EE+ E+ KG+ PD +Y ++ A R+ + + F +M +SGL P++ YN V
Sbjct: 507 RSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFV 566
Query: 237 GKLVQVGMLDEAKSFFDIMVKK 258
M ++A M+K
Sbjct: 567 ASYAADSMFEDAIDVVRYMIKH 588
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
S+N + YC GR K+A +F +M E PD +++N + + M +A ++ M
Sbjct: 526 SYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYM 585
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
G P++ TY ++D + N DD + + + L P+++
Sbjct: 586 IKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISSLHE--LDPHIS 628
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+I L K G ++ A L ++ G D Y Y L+ AC R + F+KM + G
Sbjct: 4 IISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 225 LRPNLAVYNRLVGKLVQVGM-LDEAKSFFDIM 255
+P L YN ++ ++GM ++ K F+ M
Sbjct: 64 CKPTLITYNVILNVYGKMGMPWNKIKGLFEGM 95
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 11/149 (7%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGME 63
GF Y+ LM R S+ R E LKE L G+ D + Y +++ Y G
Sbjct: 484 GFTPSLATYNSLMYMHSR---SENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRM 540
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA ++E S + + N+ + + + F++A+ + M P N
Sbjct: 541 KEASRIFSEM--RESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKP-----N 593
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
++N + DGYC DAI + E
Sbjct: 594 QNTYNSVVDGYCKHNHRDDAIMFISSLHE 622
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 149/318 (46%), Gaps = 11/318 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
AD V+Y+ ++ G + D LF E+ K G+ D Y SL+ G +A
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK--GIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
++ + + + V ++++DA GK EA KL+D M P ++ ++
Sbjct: 314 RLLSDMI--ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP-----DIFTY 366
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ + +G+C R +A +F M C P+ ++++ LI CK + E EL+ EMS
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G+ + TY L+ F+ D+ F++MV G+ PN+ YN L+ L + G L +
Sbjct: 427 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486
Query: 248 AKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A F+ + + ++ D +Y M++ + GK+++ E+ + G +
Sbjct: 487 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMIS 546
Query: 307 GELSKEGREEEVVKLMEK 324
G ++G +EE L++K
Sbjct: 547 G-FCRKGSKEEADSLLKK 563
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 9/254 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D ++ L+ G + L +++ ++ G D V YG+++ G +G +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR--GCQPDLVTYGTVVNGLCKRGDID 240
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ + E ++ V N+++D LC D+AL LF M N+ P ++
Sbjct: 241 LALSLLKKM--EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP-----DV 293
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + C GR+ DA + M E + +P+ ++F+ LID K G L EAE+LY E
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + ++PD +TY L++ +R+D+ F M+ PN+ Y+ L+ +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 245 LDEAKSFFDIMVKK 258
++E F M ++
Sbjct: 414 VEEGMELFREMSQR 427
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 138/316 (43%), Gaps = 14/316 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D YS + F R + ++ + G D V SL+ GY
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL--GYEPDIVTLSSLLNGYCHSKRIS 170
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ ++ V K +++ L + K EA+ L D+M P +L
Sbjct: 171 DAVALVDQMV--EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP-----DL 223
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + +G C +G A+ + +KM + + D + +N +ID LCK + +A L+ E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +KG+ PD +TY L+ R D + M++ + PN+ ++ L+ V+ G
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD----DGGIEFSE 299
L EA+ +D M+K+ + D +Y ++ +LDE + ++ + +S
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 300 ELQEFVKGELSKEGRE 315
++ F K + +EG E
Sbjct: 404 LIKGFCKAKRVEEGME 419
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 21/235 (8%)
Query: 9 DPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP +++Y L+ GF D +FE + K + V Y +L+KG+ EE
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISK--DCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKF-----DEALKLFDRMKNEHNPPKRLA 121
ME + E + + N+V +G F D A +F +M + P
Sbjct: 418 MELFRE-------MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP---- 466
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N+ ++N++ DG C G+ A+ VF + PD ++N +I+ +CK G + + EL
Sbjct: 467 -NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ +S KGV+P+ Y ++ ++ + +KM + G PN YN L+
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 112/241 (46%), Gaps = 7/241 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S V N +L A+ KF+ + L ++M+ ++ +L ++++ + +C + +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLG-----ISHDLYTYSIFINCFCRRSQLSL 136
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ V KM + PD ++ ++L++ C + +++A L +M + G PD +T+ L+
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKM 261
F N+ + +MV G +P+L Y +V L + G +D A S M K K++
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
D Y ++ L +D+ L + +D+ GI + L GR + +L
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTE-MDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 322 M 322
+
Sbjct: 316 L 316
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 12/267 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D ++ L+ G +G LF+++ + G D V YG+L+ G G
Sbjct: 126 GHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGE--GFRPDVVTYGTLINGLCKVGNTS 183
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ V +N + + A N+++D+LC + + EA LF M K ++ ++
Sbjct: 184 AAIRLLGSMVQKNC--QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVT-----KGISPDI 236
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + C +K + +M + + PD +SFN ++D LCK G + EA ++ +
Sbjct: 237 FTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDK 296
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +GV P+ TY LMD ++ +D+ F MV G PN+ YN L+ ++
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 356
Query: 245 LDEAKSFFDIM---VKKLKMDDASYKF 268
+D+A + +M L MD+A F
Sbjct: 357 IDKAIHYTXLMDXXCCYLNMDEAVKVF 383
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 6/207 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ +C GK EAL LFD+M E P ++ ++ + +G C G AI +
Sbjct: 135 TTLIRGICVEGKIGEALHLFDKMIGEGFRP-----DVVTYGTLINGLCKVGNTSAAIRLL 189
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M + C P+ ++N +ID LCK+ + EA L+ EM KG++PD +TY L+ A +
Sbjct: 190 GSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL 249
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
AT +MVDS + P++ +N +V L + G + EA D M+++ ++ + +Y
Sbjct: 250 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTY 309
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDG 293
+M ++DE +++ ++ G
Sbjct: 310 TALMDGHCLLSEMDEAVKVFDTMVCKG 336
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 24/269 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ LM G + D ++F+ + K G + + + Y +L+ GY
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCK--GCMPNVISYNTLINGYCKI 354
Query: 61 GMEEEAME---------CY---NEAVGENSSVKM-----SAVANNSVLDALCNNGKFDEA 103
++A+ CY +EAV ++ + ++ N++++ C + D+A
Sbjct: 355 QRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 414
Query: 104 LKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFN 163
+ LF M + P + +++ + G C R +DAI +F +M P+ +++
Sbjct: 415 MYLFGEMCRQELIPDTV-----TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 469
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
L+D LCKN LAEA L + ++PD + +D ++ F +
Sbjct: 470 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 529
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
GL+P++ Y+ ++ L + G+LDEA F
Sbjct: 530 GLQPDVWTYSIMINGLCRRGLLDEASKLF 558
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 11/253 (4%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S V N +L ++ L L +M + PP N+ + +++ + +C R
Sbjct: 60 STVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPP-----NIYTLHILINSFCHLNRVGF 114
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A V K+ + PDT +F LI +C G + EA L+ +M +G PD TYG L++
Sbjct: 115 AFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLIN 174
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+V MV +PN+ YN ++ L + + EA + F MV K +
Sbjct: 175 GLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISP 234
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKGELSKEGREEEVV 319
D +Y ++ AL + + + ++ ++D + ++ F V L KEG+ E
Sbjct: 235 DIFTYNSLIHALCNLCEWKHVATLLNEMVDS---KIMPDVVSFNTVVDALCKEGKVTEAH 291
Query: 320 KLMEKKEREKAEA 332
+++K + E
Sbjct: 292 DVVDKMIQRGVEP 304
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 9/276 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + + + Y+ L+ G+ + D LF E+ + ++ D V Y +L+ G
Sbjct: 386 MVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQ--ELIPDTVTYSTLIHGLCHV 443
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A+ ++E V S + V +LD LC N EA+ L ++ + P +
Sbjct: 444 ERLQDAIALFHEMVA--CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPD-I 500
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
VN N+ DG C G + A ++F + PD +++ +I+ LC+ G+L EA +
Sbjct: 501 QVN----NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 556
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM + G + Y + N ++MV G + + V L
Sbjct: 557 LFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS 616
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG 276
G+ K K + D+S + L G
Sbjct: 617 DDGLDQSLKQILRNGCKWISTFDSSSSTGLHILQKG 652
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
AI F +M + P T+ FN L+ + K + L +M G+ P+ YT +L++
Sbjct: 45 AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKM 261
+ +NRV + K++ G +P+ A + L+ + G + EA FD M+ + +
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRP 164
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGIL 290
D +Y ++ L G + ++G ++
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMV 193
>gi|297725689|ref|NP_001175208.1| Os07g0491500 [Oryza sativa Japonica Group]
gi|255677777|dbj|BAH93936.1| Os07g0491500, partial [Oryza sativa Japonica Group]
Length = 654
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 10/313 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y ++ +DG +FE + ++ G ++ +Y +L+ G E+EAM +
Sbjct: 330 YVLVIGALCKDGKPFEGMAVFERMLKR--GCAANAAIYTALIDSMGKFGREKEAMALFER 387
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
++S +K+ +V +++ LC GK DEA+ F + K +AVN + + D
Sbjct: 388 M--KDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQE-----KGIAVNAIFYTSLID 440
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G+ G + E+F +M PD+ +N LID L K+G + +A LY M D G +
Sbjct: 441 GFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQ 500
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
YTY +L+D F+ ++ ++ ++ M+D G+ P A + L L G A
Sbjct: 501 TVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRIL 560
Query: 253 DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE 312
D + + + +++ M+ L G+ + ++ GI+ G E ++ + L K
Sbjct: 561 DELAPMGVIPETAHEDMINVLCKAGRFKQACKLADGIVQKGR-EIPGRVRTMMINALRKA 619
Query: 313 GREEEVVKLMEKK 325
G + VKL+ K
Sbjct: 620 GNTDLAVKLVHSK 632
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 13/327 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G ++Y+ L+ G V G D +F+ + + V D V Y L+KGY
Sbjct: 209 MRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTE-DQVRPDVVSYNILIKGYCRA 267
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE---HNPP 117
G +AM +E + E + + V +++ + G F + LF M+ ++ P
Sbjct: 268 GRAHDAMARLSE-MQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIP 326
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+ ++ ++ C G+ + + VF +M + C+ + + LID + K G E
Sbjct: 327 QH------AYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKE 380
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A L+ M D G+ D TYG++++ ++D+ FR + G+ N Y L+
Sbjct: 381 AMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLID 440
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+ GM+D++K F+ M+ K D Y ++ L+ G++D+ + + DDG +
Sbjct: 441 GFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQ 500
Query: 297 FSEELQEFVKGELSKEGREEEVVKLME 323
+ G L KE + EE +K +
Sbjct: 501 TVYTYTILIDG-LFKEHKNEEALKFWD 526
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 10/235 (4%)
Query: 51 GSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM 110
SL++ G+ EE + + + V+ S + N +LD L N G D A+ +FD M
Sbjct: 187 ASLIRSLAALGLAEELLWAWKAM--RLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAM 244
Query: 111 KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY-RCSPDTLSFNNLIDQL 169
E ++ ++ S+N++ GYC GR DA+ +M E + +PD +++ L+
Sbjct: 245 STE----DQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCH 300
Query: 170 CKNGMLAEAEELYGEMSDKGVNPD--EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
G L+ EM ++G+ D ++ Y L++ A + + +G F +M+ G
Sbjct: 301 YSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAA 360
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
N A+Y L+ + + G EA + F+ M LK+D +Y ++ L GKLDE
Sbjct: 361 NAAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDE 415
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + G+ V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A +LFD M + P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVVLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A+E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 101/252 (40%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + S++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCSMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAEILETKGTQTSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +LM + + + + F + GLRP++ +N L+ +++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE + M ++ D +Y ++ L K+D+ E+ +LD+G +
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 150/300 (50%), Gaps = 14/300 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + GF D V Y+ L+ + + S + +E++ G V Y SL+ Y
Sbjct: 297 MKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEG--NGCPPSIVTYNSLISAYARD 354
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G+ E+A+E N+ V +K ++L GK A+++F+ M+NE P
Sbjct: 355 GLLEDALELKNQMV--EKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKP--- 409
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +FN + + +G+F + ++VF + ++CSPD +++N L+ +NGM +E
Sbjct: 410 --NICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSG 467
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM G P+ T+ L+ + D +++M+++G+ P+L+ YN ++ L
Sbjct: 468 VFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALA 527
Query: 241 QVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEIL----EIVGGILDDGGI 295
+ G+ ++ K ++ + K ++ +Y ++ A ++G +++ + EI GI++ +
Sbjct: 528 RGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAV 587
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 128/284 (45%), Gaps = 19/284 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D Y+ ++ F +G +F++++E G + Y ++ Y GM
Sbjct: 195 GFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEV--GCKPTLITYNVILNVYGKMGMP- 251
Query: 65 EAMECYNEAVGENSSVKMSAVANNS----VLDALCNNGK-FDEALKLFDRMKNEHNPPKR 119
+N+ VG +K + +A +S L + C G ++EA + MK P +
Sbjct: 252 -----WNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDK 306
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ ++N + D Y R K+A+EV ++M C P +++N+LI ++G+L +A
Sbjct: 307 V-----TYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDAL 361
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL +M +KG+ PD +TY L+ + + F +M + G +PN+ +N L+
Sbjct: 362 ELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMH 421
Query: 240 VQVGMLDE-AKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
G E K F DI + D ++ ++ G E+
Sbjct: 422 GNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEV 465
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
S+N + YC GR +DA V +M E +PD +++N I + M EA ++ M
Sbjct: 693 SYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYM 752
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
G P++ TY ++D ++NR D+ + + + L P++++
Sbjct: 753 IKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNL--RKLDPHISM 796
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 120/309 (38%), Gaps = 21/309 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ ++ R G ++ E+K+ G + + Y SL+ Y
Sbjct: 507 MLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKD--GRCKPNELTYCSLLHAY-AN 563
Query: 61 GMEEEAM-----ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
G E E M E Y+ + + + + V NS D L E + F ++
Sbjct: 564 GKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLM------ETERAFLELRQRGF 617
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P ++ + N M Y + A E+ M +P ++N+L+ ++
Sbjct: 618 SP-----DITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANF 672
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+EE+ E+ KG+ PD +Y ++ A R+ D + +M +SG P++ YN
Sbjct: 673 ERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTF 732
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD-DG 293
+ M EA M+K K + ++Y ++ + DE V + D
Sbjct: 733 IASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRKLDP 792
Query: 294 GIEFSEELQ 302
I EE +
Sbjct: 793 HISMDEECR 801
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+I L K G ++ A L + G + D Y Y ++ A R + F+KM + G
Sbjct: 171 IISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVG 230
Query: 225 LRPNLAVYNRLV---GKL-----VQVGMLDEAKS 250
+P L YN ++ GK+ VG++D KS
Sbjct: 231 CKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKS 264
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 144/314 (45%), Gaps = 46/314 (14%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D VYS ++ R G+ F LF+E+ ++ +V + YG+L+ G G E A
Sbjct: 321 DVYVYSSMISWSRRLGNMKRAFALFDEMSQR--DIVPNAHTYGALIGGVCKAGQMEAAEI 378
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
E ++ V ++ V N+ +D C GK DEAL+L M+ K + ++ ++N
Sbjct: 379 LLLEM--QSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEK-----KGINADVFTYN 431
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
++A+G C R+ +A + M E P+ ++F I+ CK G LAEAE L+ +M K
Sbjct: 432 ILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKK 491
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G P+ TY L+DA + +V +M++ GL P+L Y+ L+ VG +DEA
Sbjct: 492 GEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEA 551
Query: 249 KSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
F+ M +K + + A+Y M+ LS
Sbjct: 552 LKLFNEMRLKGITRNVATYTSMISGLS--------------------------------- 578
Query: 308 ELSKEGREEEVVKL 321
KEGR +E KL
Sbjct: 579 ---KEGRADEAFKL 589
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 9/254 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+ V + Y L+ G + G + L E++ K GV + V++ + M GY +G
Sbjct: 351 RDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSK--GVDLNLVIFNTTMDGYCRRGKM 408
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA+ +A+ E + N + + LC ++DEA + + M + P N
Sbjct: 409 DEALRL--QAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKP-----N 461
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +F + + YC +G +A +FR M + P+ +++N LID CK + +A ++
Sbjct: 462 VVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKS 521
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +KG+ PD YTY L+ V RVD+ F +M G+ N+A Y ++ L + G
Sbjct: 522 EMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEG 581
Query: 244 MLDEAKSFFDIMVK 257
DEA +D M+K
Sbjct: 582 RADEAFKLYDEMMK 595
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 142/318 (44%), Gaps = 13/318 (4%)
Query: 7 VADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
+ P V++Y L+ +V D GV + + ++++ VV Y L++ Y G E
Sbjct: 247 IVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKE--QVVFSVATYSILIQWYSSSGDIE 304
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + + E +N ++M +S++ G A LFD M P N
Sbjct: 305 EAEKIFEEMREKN--IEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVP-----NA 357
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G C G+ + A + +M + + FN +D C+ G + EA L
Sbjct: 358 HTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAI 417
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG+N D +TY +L + +++R D+ MV+ G++PN+ + + + G
Sbjct: 418 MEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGN 477
Query: 245 LDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L EA+ F M KK ++ + +Y ++ A K+ + +I +++ G +
Sbjct: 478 LAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSS 537
Query: 304 FVKGELSKEGREEEVVKL 321
+ GE GR +E +KL
Sbjct: 538 LIHGE-CIVGRVDEALKL 554
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 9/234 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V+++ M G+ R G D RL +++K G+ +D Y L G
Sbjct: 386 KGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKK--GINADVFTYNILANGLCKLHRY 443
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA N V VK + V ++ C G EA +LF M+ + P N
Sbjct: 444 DEAKCILNSMV--EKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVP-----N 496
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + D YC + + K A ++ +M PD ++++LI C G + EA +L+
Sbjct: 497 IITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFN 556
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
EM KG+ + TY ++ + R D+ + +M+ GL P+ V+ LVG
Sbjct: 557 EMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVG 610
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 10/209 (4%)
Query: 90 VLDALCNNGKFDEALKLFDRM--KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
V+D LC G+ ++A +L D M K P N+ ++N + + Y G+ K E+
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGIVKP------NVFTYNTLLNAYVGRKDRKGVDEIL 275
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ M + + +++ LI +G + EAE+++ EM +K + D Y Y ++ +
Sbjct: 276 KLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRL 335
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-FFDIMVKKLKMDDASY 266
+ F +M + PN Y L+G + + G ++ A+ ++ K + ++ +
Sbjct: 336 GNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIF 395
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGI 295
M GK+DE L + I++ GI
Sbjct: 396 NTTMDGYCRRGKMDEALRL-QAIMEKKGI 423
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 82/166 (49%), Gaps = 9/166 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V ++ + + ++G+ RLF ++++K G V + + Y +L+ Y K
Sbjct: 453 MVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKK--GEVPNIITYNTLIDAYCKK 510
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A + +E + N + +S++ C G+ DEALKLF+ M+ K +
Sbjct: 511 EKVKQAHKIKSEMI--NKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMR-----LKGI 563
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
N+ ++ M G +GR +A +++ +M + PD F +L+
Sbjct: 564 TRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 28/188 (14%)
Query: 96 NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM--ADGYCGQGRFKDAIEVFRKMGEY 153
+N FDE ++++D ++ K L + S V+ A CG+ F + F +M E
Sbjct: 157 DNRLFDETIRVYDYVEE-----KGLVIEERSCFVLLLALKRCGEVDF--CVRFFHRMVES 209
Query: 154 -RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VNPDEYTYGLLMDACFEVNRVD 211
+ S +ID LC+ G + +A+EL EM KG V P+ +TY L++A V R D
Sbjct: 210 NKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNA--YVGRKD 267
Query: 212 DGATYFRKMVDSGLRP--------NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
RK VD L+ ++A Y+ L+ G ++EA+ F+ M +K ++MD
Sbjct: 268 ------RKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMD 321
Query: 263 DASYKFMM 270
Y M+
Sbjct: 322 VYVYSSMI 329
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 142/325 (43%), Gaps = 12/325 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V D + Y+ L+ GF + D +L + + K G V YGS++ G+
Sbjct: 459 MVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK--GPEPTAVTYGSIVHGFCKL 516
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M EA E + + S+L + G+ +EA ++ M P +
Sbjct: 517 DMINEAKEVIAQM--RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVI 574
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ + D GR +A VF M E C+PD L++ +I K G + A E
Sbjct: 575 L-----YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGE 629
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M+ GV PD + Y LMD ++ RVD + +MV SG++PN +N L+ L
Sbjct: 630 ILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLF 689
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA--SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ G D A S F M++K ++ SY ++ L G++ E ++D G I
Sbjct: 690 KDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPEC 749
Query: 299 EELQEFVKGELSKEGREEEVVKLME 323
+ L+K GR E KL+E
Sbjct: 750 HTYTSLIY-SLAKAGRIPEAKKLVE 773
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 136/283 (48%), Gaps = 14/283 (4%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+K F D +Y+ ++ G+ + GD D F++ EE+ G + D Y L+ G
Sbjct: 117 LKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLA--AGCIPDAAAYFVLIDPLCKLGR 174
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+EA E + S V ++++AL N+GK DEA +L+ M P L V
Sbjct: 175 VDEAYELFERM--RKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEP-YLEV 231
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ + C G+ +A E+++ + + + +++N+L+D CK G + + +L
Sbjct: 232 Q----DSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLL 287
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M + PD TY +L+ NR+DD F+ + G +PN A Y ++ L
Sbjct: 288 LQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDA 347
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
++EAK+FFD +D SY ++K L+D ++DE E+
Sbjct: 348 QRMEEAKAFFD-----EALDVISYTTVIKGLADSKRIDEACEL 385
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 131/280 (46%), Gaps = 11/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D ++Y+ L+ G +F+ + EK G D + YG++++ +
Sbjct: 564 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK--GCAPDALTYGTIIQNFSKI 621
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A E + S V A NS++D + D+A ++DRM P
Sbjct: 622 GNVEAAGEILE--LMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP--- 676
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL-SFNNLIDQLCKNGMLAEAE 179
N +FNV+ G G+ A +F++M E P TL S+ LID L K G ++EA
Sbjct: 677 --NAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAF 734
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ EM D+G+ P+ +TY L+ + + R+ + MV G+ P++ Y+ L+ L
Sbjct: 735 SQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 794
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
+ M+D A F M+K+ ++ +YK + + G+
Sbjct: 795 IDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 834
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 11/287 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + D V + ++ G + D LF E+ G V Y +++ G
Sbjct: 11 MHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSM--GCEPTIVSYNTVISGLASI 68
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA + +N + ++ + +A +++ C G+ L ++ P L
Sbjct: 69 DKMDEAYKFFNSMI--DNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFL 126
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ + GYC G ++ +M C PD ++ LID LCK G + EA E
Sbjct: 127 ------YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M G D T+ L++A ++D+ +R+M++ G P L V + L+ L
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC 240
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+ G +DEA + +V KK+ +Y +M G++D+ L+++
Sbjct: 241 KAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLL 287
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 15/248 (6%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ LM G+ + G D +L ++ E D Y L+ G+ ++A+E +
Sbjct: 265 VAYNSLMDGYCKLGRVDDGLKLLLQMVE--CDNFPDIQTYNILVAGFSRANRLDDALELF 322
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + K +A +++ L + + +EA FD A+++ S+ +
Sbjct: 323 K--LLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE-----------ALDVISYTTV 369
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G R +A E+F K+ CSP+ +++ +ID L K G + + + + +MS
Sbjct: 370 IKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSC 429
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P TY +++D + + D F +MV G P+ Y L+ + +DEA+
Sbjct: 430 VPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARK 489
Query: 251 FFDIMVKK 258
D+M+ K
Sbjct: 490 LLDVMLTK 497
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 1/187 (0%)
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
++A++ ++M PD ++ N +++ LCK + +A EL+ EM G P +Y +
Sbjct: 2 EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK 260
+ ++++D+ +F M+D+G P++ + L+ + G + +K+ +
Sbjct: 62 ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR 121
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
D Y ++ G LD +I+ +L G I + + L K GR +E +
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLID-PLCKLGRVDEAYE 180
Query: 321 LMEKKER 327
L E+ +
Sbjct: 181 LFERMRK 187
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 163/391 (41%), Gaps = 80/391 (20%)
Query: 5 GFVADPVVYSYLMLGFVRDGDS-DGVFRLFEELKEK------------------------ 39
G+ D V Y+ ++ G +R+G D + LF+++ ++
Sbjct: 197 GYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDK 256
Query: 40 ---------LGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
G + + + + SL+ GY G +A+ + + V+ N++
Sbjct: 257 AAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRD--GVEPDVFTYNTL 314
Query: 91 LDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+ LC NG+ EA K+FD M K H P N ++ + GY +G +
Sbjct: 315 MGYLCKNGRSMEARKIFDSMVKRGHKP------NSATYGTLLHGYATEGSLVKMHHLLDM 368
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M PD FN LI K+G + +A L+ +M +G+NPD TYG++MDA V +
Sbjct: 369 MVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGK 428
Query: 210 VDDGATYFRKMVDSGLRPNLAVY-----------------------------------NR 234
VDD F +++ GL P+ V+ N
Sbjct: 429 VDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNT 488
Query: 235 LVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L+ L + GM+ AK+ FD+MV+ ++ D +Y ++ GK+DE +++ G++ D
Sbjct: 489 LLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLD- 547
Query: 294 GIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
G++ +E + K GR E+ L +
Sbjct: 548 GVKPNEVTYNTMINGYCKNGRIEDAFSLFRQ 578
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 140/293 (47%), Gaps = 14/293 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y +M G D F L + G+ D VV+ +L+ G +
Sbjct: 407 QGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE--GLTPDAVVFRNLIHGLCARDKW 464
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV- 122
++A E E +G + + + N++L+ LC G A +FD M R+ V
Sbjct: 465 DKAEELAVEMIGR--GICPNNIFFNTLLNHLCKEGMVARAKNIFDLMV-------RVDVQ 515
Query: 123 -NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ ++N + DGYC G+ +A ++ M P+ +++N +I+ CKNG + +A L
Sbjct: 516 RDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSL 575
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ +M+ KGVNP TY ++ F+ R + M+ SG++ ++ YN ++ L Q
Sbjct: 576 FRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQ 635
Query: 242 VGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
D+A F ++ + +++ ++ M+ AL GG+ DE ++ +L G
Sbjct: 636 NNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARG 688
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 147/319 (46%), Gaps = 15/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ +G D VV+ L+ G D L E+ + G+ + + + +L+ +
Sbjct: 439 LISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGR--GICPNNIFFNTLLNHLCKE 496
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM A ++ V V+ + N+++D C +GK DEA KL + M + P +
Sbjct: 497 GMVARAKNIFDLMV--RVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEV 554
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N M +GYC GR +DA +FR+M +P ++++ ++ L + A A+E
Sbjct: 555 -----TYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKE 609
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY M G+ D TY +++ + N DD F+ + +N ++ L+
Sbjct: 610 LYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALL 669
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G DEAK F ++ + L + +Y MMK+L + G L+E+ ++ + +G S
Sbjct: 670 KGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSR 729
Query: 300 ELQEFV-----KGELSKEG 313
L V KGE+ K G
Sbjct: 730 MLNALVGKLLQKGEVRKAG 748
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 145/323 (44%), Gaps = 12/323 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMEC- 69
+ YS ++ R G D F + G ++ + + L+K K EAM+
Sbjct: 92 ITYSVVIDCCSRVGHLDLAFAALGRVIR--SGWTAEAITFSPLLKALCDKKRTSEAMDIA 149
Query: 70 --YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+G +V + +L LC+ + +AL L M + ++ S+
Sbjct: 150 LRRMPVLGCTPNVFSYTI----LLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSY 205
Query: 128 NVMADGYCGQGRFKD-AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
N + +G +GR D A +F +M + SPD +++N++I L K + +A + M
Sbjct: 206 NTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMV 265
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G P+ T+ L+ + +D F++M G+ P++ YN L+G L + G
Sbjct: 266 KNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSM 325
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
EA+ FD MVK+ K + A+Y ++ + G L ++ ++ ++ + GI+ + +
Sbjct: 326 EARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRN-GIQPDHYIFNIL 384
Query: 306 KGELSKEGREEEVVKLMEKKERE 328
G +K G+ ++ + L K R+
Sbjct: 385 IGTYTKHGKVDDAMLLFSKMRRQ 407
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 32/240 (13%)
Query: 43 VVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE 102
V D + Y +L+ GY + G +EA + V + VK + V N++++ C NG+ ++
Sbjct: 514 VQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLD--GVKPNEVTYNTMINGYCKNGRIED 571
Query: 103 ALKLFDRMKNEHNPP---------------KRLAV---------------NLGSFNVMAD 132
A LF +M ++ P +R A ++G++N++
Sbjct: 572 AFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILL 631
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G C DA+ +F+ + + +FN +ID L K G EA++L+ + +G+ P
Sbjct: 632 GLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVP 691
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+ TY L+M + E +++ F + +G N + N LVGKL+Q G + +A +
Sbjct: 692 NVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYL 751
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 173/403 (42%), Gaps = 79/403 (19%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG------------------- 41
+ +GF + V Y+ L+ G + GD+ G +L ++ +L
Sbjct: 155 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQL 214
Query: 42 --------------GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
G+ +D V Y +L+ G+ ++G +EA+ NE V + ++ +
Sbjct: 215 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK--TINPNVYTY 272
Query: 88 NSVLDALCNNGKFDEALKLFDRM--------------------------KNEH--NPPKR 119
N ++DALC GK EA + M K +H N
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332
Query: 120 LAV--NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+ V ++ ++ ++ +G+C +A+ +F++M + P +++++LID LCK+G +
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPY 392
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
+L EM D+G D TY L+D + +D F KM D +RPN+ + L+
Sbjct: 393 VWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLD 452
Query: 238 KLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
L + G L +A+ F D++ K ++ +Y M+ G L+E L ++ + D+G I
Sbjct: 453 GLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIP 512
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+ E ++ L +K E +KAE R+ A
Sbjct: 513 NAFTF-------------ETIIIALFKKDENDKAEKLLRQMIA 542
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 9/225 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G D Y+ L+ GF ++ D LF+E+ +K +V V Y SL+ G
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQK--NMVPGIVTYSSLIDGLCKS 387
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + +E + + +S++D LC NG D A+ LF++MK++ P
Sbjct: 388 GRIPYVWDLIDEM--RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRP--- 442
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +F ++ DG C GR KDA EVF+ + + ++N +I+ CK G+L EA
Sbjct: 443 --NIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALT 500
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+ +M D G P+ +T+ ++ A F+ + D R+M+ GL
Sbjct: 501 MLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 23/258 (8%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK-------LGGVVSDGVVYGSLMKGYFMK 60
D + YS LM DG F ++E K + L GV D Y L+ G+
Sbjct: 302 PDVITYSTLM---------DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M +EA+ + E +N + V +S++D LC +G+ L D M++ P
Sbjct: 353 KMVDEALNLFKEMHQKN--MVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQP---- 406
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + DG C G AI +F KM + P+ +F L+D LCK G L +A+E
Sbjct: 407 -ADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQE 465
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ ++ KG + + YTY ++++ + +++ T KM D+G PN + ++ L
Sbjct: 466 VFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALF 525
Query: 241 QVGMLDEAKSFFDIMVKK 258
+ D+A+ M+ +
Sbjct: 526 KKDENDKAEKLLRQMIAR 543
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 146/322 (45%), Gaps = 11/322 (3%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+KG D + + L+ F G F + ++ ++ G D V +L+KG +KG
Sbjct: 87 LKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKR--GYPPDTVTLNTLIKGLCLKGQ 144
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
++A+ +++ + + +++ V+ ++++ +C G A+KL ++ P
Sbjct: 145 VKKALHFHDKLLAQ--GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKP----- 197
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ ++ + D C +A +F +M S D ++++ LI C G L EA L
Sbjct: 198 NVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLL 257
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM K +NP+ YTY +L+DA + +V + + M+ + ++P++ Y+ L+ V
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLV 317
Query: 243 GMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+ +A+ F+ M + + D +Y ++ +DE L + + +
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377
Query: 302 QEFVKGELSKEGREEEVVKLME 323
+ G L K GR V L++
Sbjct: 378 SSLIDG-LCKSGRIPYVWDLID 398
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA+ F +M R +P + FN ++D K + A L + KG+ PD T +L+
Sbjct: 42 DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLK 260
+ + ++ G + K++ G P+ N L+ L G + +A F D ++ + +
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161
Query: 261 MDDASYKFMMKALSDGGKLD---EILEIVGGILDDGGIE-FSEELQEFVKGELSKEG 313
++ SY ++ + G ++L + G L +E +S + K +L E
Sbjct: 162 LNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 218
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 43/218 (19%)
Query: 101 DEALKLFDRMKN-EHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
D+A+ F+RM H PP + FN + D + + A+ + ++ PD
Sbjct: 41 DDAVSQFNRMLCMRHTPP------IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDL 94
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-C-------------- 204
++ N LI+ C G + + ++ +G PD T L+ C
Sbjct: 95 ITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDK 154
Query: 205 -----FEVNRVD--------------DGATYFRKMVDSGL-RPNLAVYNRLVGKLVQVGM 244
F++N+V GA + +D L +PN+ +Y+ ++ L + +
Sbjct: 155 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQL 214
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ EA F ++ VK + D +Y ++ GKL E
Sbjct: 215 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKE 252
>gi|34393621|dbj|BAC83297.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 657
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 10/313 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y ++ +DG +FE + ++ G ++ +Y +L+ G E+EAM +
Sbjct: 333 YVLVIGALCKDGKPFEGMAVFERMLKR--GCAANAAIYTALIDSMGKFGREKEAMALFER 390
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
++S +K+ +V +++ LC GK DEA+ F + K +AVN + + D
Sbjct: 391 M--KDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQE-----KGIAVNAIFYTSLID 443
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G+ G + E+F +M PD+ +N LID L K+G + +A LY M D G +
Sbjct: 444 GFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQ 503
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
YTY +L+D F+ ++ ++ ++ M+D G+ P A + L L G A
Sbjct: 504 TVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRIL 563
Query: 253 DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE 312
D + + + +++ M+ L G+ + ++ GI+ G E ++ + L K
Sbjct: 564 DELAPMGVIPETAHEDMINVLCKAGRFKQACKLADGIVQKGR-EIPGRVRTMMINALRKA 622
Query: 313 GREEEVVKLMEKK 325
G + VKL+ K
Sbjct: 623 GNTDLAVKLVHSK 635
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 13/327 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G ++Y+ L+ G V G D +F+ + + V D V Y L+KGY
Sbjct: 212 MRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTE-DQVRPDVVSYNILIKGYCRA 270
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE---HNPP 117
G +AM +E + E + + V +++ + G F + LF M+ ++ P
Sbjct: 271 GRAHDAMARLSE-MQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIP 329
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+ ++ ++ C G+ + + VF +M + C+ + + LID + K G E
Sbjct: 330 QH------AYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKE 383
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A L+ M D G+ D TYG++++ ++D+ FR + G+ N Y L+
Sbjct: 384 AMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLID 443
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+ GM+D++K F+ M+ K D Y ++ L+ G++D+ + + DDG +
Sbjct: 444 GFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQ 503
Query: 297 FSEELQEFVKGELSKEGREEEVVKLME 323
+ G L KE + EE +K +
Sbjct: 504 TVYTYTILIDG-LFKEHKNEEALKFWD 529
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 10/235 (4%)
Query: 51 GSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM 110
SL++ G+ EE + + + V+ S + N +LD L N G D A+ +FD M
Sbjct: 190 ASLIRSLAALGLAEELLWAWKAM--RLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAM 247
Query: 111 KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY-RCSPDTLSFNNLIDQL 169
E ++ ++ S+N++ GYC GR DA+ +M E + +PD +++ L+
Sbjct: 248 STE----DQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCH 303
Query: 170 CKNGMLAEAEELYGEMSDKGVNPD--EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
G L+ EM ++G+ D ++ Y L++ A + + +G F +M+ G
Sbjct: 304 YSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAA 363
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
N A+Y L+ + + G EA + F+ M LK+D +Y ++ L GKLDE
Sbjct: 364 NAAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDE 418
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 147/313 (46%), Gaps = 13/313 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D + YS ++ D S L + +K GG + V Y +++ G+F +G
Sbjct: 185 GVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVS 244
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A ++E + + V V +S +DALC D+A + +M + P ++
Sbjct: 245 KACNLFHEMMQQG--VVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKV---- 298
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N M GY G++K+ +FR+M PD + N+ + LCK+G EA E +
Sbjct: 299 -TYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDS 357
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ KG PD TY +L+ V D F M +G+ + +VYN L+ + GM
Sbjct: 358 MAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGM 417
Query: 245 LDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKL----DEILEIVGGILDDGGIEFSE 299
+DEA F M ++ M DA +Y ++ A S G+L D+ +++ L I ++
Sbjct: 418 MDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNS 477
Query: 300 ELQEF-VKGELSK 311
+Q F + G L K
Sbjct: 478 LIQGFCMHGNLVK 490
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 11/295 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D V YS + + D + ++ G D V Y ++ GY +
Sbjct: 253 MMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISN--GFEPDKVTYNCMIHGYSIL 310
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +E + E + NS + +LC +GK EA + FD M + + P
Sbjct: 311 GQWKETAGMFREMT--RRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKP--- 365
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L +++V+ GY +G D + +F M D +N LID K GM+ EA
Sbjct: 366 --DLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAML 423
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M ++GV PD +TYG ++ A + R+ D F +M+ GL+P+ VYN L+
Sbjct: 424 IFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFC 483
Query: 241 QVGMLDEAKSFFDIMVKK--LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
G L +AK M+ + + + + ++ +L G++ E +I ++ G
Sbjct: 484 MHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIG 538
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 15/285 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VAD VY+ L+ + + G D +F +++E+ GV+ D YG+++ + G
Sbjct: 397 GIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQER--GVMPDAWTYGTVIAAFSRMGRLA 454
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+AM+ +N+ + +K + NS++ C +G +A +L M + P N
Sbjct: 455 DAMDKFNQMIA--MGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRP----NT 508
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG- 183
FN + + C +GR +A ++F + PD ++FN+LID G++ + E+ +G
Sbjct: 509 VFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGY---GLVGKMEKAFGV 565
Query: 184 --EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M G+ PD TY L+D R+DDG FR+M+ G++P Y ++ L
Sbjct: 566 LDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFN 625
Query: 242 VGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
G AK M++ MD ++ ++ L DE + +
Sbjct: 626 DGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAL 670
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 149/325 (45%), Gaps = 13/325 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + D Y ++ F R G F ++ G+ D +VY SL++G+ M G
Sbjct: 431 RGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAM--GLKPDTIVYNSLIQGFCMHGNL 488
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A E +E + + + V NS++++LC G+ EA +FD + + P +
Sbjct: 489 VKAKELISEMMSRGIP-RPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERP-----D 542
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN + DGY G+ + A V M PD ++++ L+D C+NG + + L+
Sbjct: 543 VITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFR 602
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KGV P TYG+++ F R +M++SG +++ ++G L +
Sbjct: 603 EMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNN 662
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
DEA + F + +K + A M+ A+ K +E E+ I G + +
Sbjct: 663 CDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYG 722
Query: 303 EFVKGELSKEGREEE---VVKLMEK 324
+ L KEG EE + LMEK
Sbjct: 723 VMIT-NLLKEGSVEEADNMFSLMEK 746
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 142/323 (43%), Gaps = 10/323 (3%)
Query: 7 VADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
VA P V +Y LM R F LF + G+ +D +V L+K +
Sbjct: 114 VALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKT--GLKTDVIVANILLKCLCHAKRSD 171
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ + E V+ ++ ++VL +LC + + AL L M + + N+
Sbjct: 172 DAVNVLLHRMPE-LGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGG---CSPNV 227
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S+N + G+ +G A +F +M + PD +++++ ID LCK + +AE + +
Sbjct: 228 VSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQ 287
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G PD+ TY ++ + + + A FR+M GL P++ N + L + G
Sbjct: 288 MISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGK 347
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
EA FFD M K K D +Y ++ + G + ++L + ++ GI +
Sbjct: 348 SKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNS-MEGNGIVADHSVYN 406
Query: 304 FVKGELSKEGREEEVVKLMEKKE 326
+ K G +E + + + +
Sbjct: 407 ILIDAYGKRGMMDEAMLIFTQMQ 429
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 119/282 (42%), Gaps = 45/282 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V YS L+ G+ R+G D LF E+ K GV + YG ++ G F
Sbjct: 569 MISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSK--GVKPTTITYGIILHGLFND 626
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A + +E + +++ +S +L LC N DEA+ LF +
Sbjct: 627 GRTVGAKKMCHEMIESGTTMDISTCG--IILGGLCRNNCDDEAIALFKK----------- 673
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
LG+ NV +F AI N +ID + K EA E
Sbjct: 674 ---LGAMNV---------KFNIAI-----------------INTMIDAMYKVRKREEANE 704
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ +S G+ P+ TYG+++ + V++ F M SG P+ + N ++ L+
Sbjct: 705 LFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLL 764
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ G + +A ++ + K + ++ ++ M+ S GK E
Sbjct: 765 EKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYRE 806
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 105/265 (39%), Gaps = 50/265 (18%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDAL--------CNNGKFDEALKLFDRMKNEHN 115
E+ ++E + + + V A+ N L AL C +G A+ LF+R+ E
Sbjct: 54 EDTHHLFDELLRQTTPVPERAL--NGFLTALARAPSSATCRDGP-SLAVALFNRICREEA 110
Query: 116 PPKRLAVNLGSFNVMADGYCGQ----------GRF------------------------- 140
P+ + ++N++ D C GRF
Sbjct: 111 RPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRS 170
Query: 141 KDAIEV-FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK--GVNPDEYTY 197
DA+ V +M E PDT+S++ ++ LC++ A +L M K G +P+ +Y
Sbjct: 171 DDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSY 230
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
++ F V F +M+ G+ P++ Y+ + L + +D+A+ M+
Sbjct: 231 NTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMIS 290
Query: 258 K-LKMDDASYKFMMKALSDGGKLDE 281
+ D +Y M+ S G+ E
Sbjct: 291 NGFEPDKVTYNCMIHGYSILGQWKE 315
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 158/333 (47%), Gaps = 20/333 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M AD V Y L+ G R GD D R++ ++ + G+V D VY SL+KG+
Sbjct: 290 MMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVK--AGLVLDVSVYNSLIKGFCEV 347
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN-PPKR 119
G EA + + ++ G + +++ N + L ++G EA +L +++N+ + P +
Sbjct: 348 GRTGEAWK-FWDSTGFSGIRQITTY--NIMTKGLLDSGMVSEATELLKQLENDASCSPDK 404
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVF---RKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
+ +F + G C G A E+ R GE D S++++I++ CK+G
Sbjct: 405 V-----TFGTLIHGLCENGYANRAFEILEDARNSGE---ELDVFSYSSMINRFCKDGRTH 456
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A E+Y M G P+ + Y L++ V++++D + +M +G P + YN L+
Sbjct: 457 DANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLI 516
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
L + EA S M+++ K D +Y +++ L K+D L I IL D G+
Sbjct: 517 DGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEIL-DAGL 575
Query: 296 EFSEELQEFVKGELSKEGREEEVVKL-MEKKER 327
+ + + L G+ +E + +E KE+
Sbjct: 576 QVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEK 608
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 143/314 (45%), Gaps = 9/314 (2%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
Y+ + G + G L ++L E D V +G+L+ G G A E
Sbjct: 369 TTYNIMTKGLLDSGMVSEATELLKQL-ENDASCSPDKVTFGTLIHGLCENGYANRAFEIL 427
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+A NS ++ + +S+++ C +G+ +A +++ M + P N +N +
Sbjct: 428 EDA--RNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKP-----NSHVYNAL 480
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+C + DAI+++ +M C P +++N LID LCK EA L EM ++G
Sbjct: 481 INGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGF 540
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD TY L+ +VD + +++D+GL+ ++ V+N L+ L G +DEA
Sbjct: 541 KPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFC 600
Query: 251 -FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
+ ++ K + +Y +M + G +D+ + ILD+G +KG
Sbjct: 601 IYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLC 660
Query: 310 SKEGREEEVVKLME 323
S E V+ L E
Sbjct: 661 SCNRTPEGVLLLNE 674
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 149/326 (45%), Gaps = 31/326 (9%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ ++ GD D LF L+ + GV D V Y +LM G + A++ +
Sbjct: 160 TYNIILRSLCARGDVDRAVSLFSSLRRR--GVAPDRVTYSTLMSGLAKHDQLDNALDLLD 217
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E N V+ AV N++L G F++A+K+++++ + + NL ++ VM
Sbjct: 218 EM--PNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGA----SPNLATYKVML 271
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
DG C GRFK+A EV+ +M DT+++ LI LC++G + A +Y +M G+
Sbjct: 272 DGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLV 331
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
D Y L+ EV R + ++ SG+R + YN + L+ GM+ EA
Sbjct: 332 LDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATE- 389
Query: 252 FDIMVKKLK------MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF- 304
++K+L+ D ++ ++ L + G + EI+ + G EEL F
Sbjct: 390 ---LLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSG-----EELDVFS 441
Query: 305 ---VKGELSKEGREE---EVVKLMEK 324
+ K+GR EV K M K
Sbjct: 442 YSSMINRFCKDGRTHDANEVYKNMVK 467
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 111/234 (47%), Gaps = 13/234 (5%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY+ L+ GF R + +++ E+ G + Y +L+ G +EA
Sbjct: 476 VYNALINGFCRVSKINDAIKIYIEMTSN--GCCPTIITYNTLIDGLCKAEKYQEASSLTK 533
Query: 72 EAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
E + G ++ A S++ LC + K D AL+++D + + L V++ N+
Sbjct: 534 EMLERGFKPDIRTYA----SLIRGLCRDKKVDVALRIWDEILDAG-----LQVDVMVHNI 584
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ G C G+ +A ++ +M E CSP+ +++N L+D + G + +A L+ + D G
Sbjct: 585 LIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNG 644
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ PD TY + NR +G +++ +G+ P + ++ LV +++ G
Sbjct: 645 LKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 10/253 (3%)
Query: 74 VGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP-PKRLAVNLGSFNVMAD 132
+G N V+ ++N++LDA ++ +A F + H +R+A NL ++N++
Sbjct: 113 LGCNPGVR----SHNTLLDAFVRARRYSDADAFFASL--SHGAFGRRIAPNLQTYNIILR 166
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
C +G A+ +F + +PD ++++ L+ L K+ L A +L EM + GV
Sbjct: 167 SLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQA 226
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMV-DSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
D Y L+ CF + + ++V D G PNLA Y ++ L ++G EA
Sbjct: 227 DAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEV 286
Query: 252 FD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELS 310
+ +M + D +Y ++ L G +D + ++ G + +KG
Sbjct: 287 WSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKG-FC 345
Query: 311 KEGREEEVVKLME 323
+ GR E K +
Sbjct: 346 EVGRTGEAWKFWD 358
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + G+ V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A +LFD M + P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++ +M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 8/251 (3%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
+F J E G +SD V+ L+ Y G +A+ECY + + ++ V+
Sbjct: 51 VFAAJLETKGTQISDIYVFSGLITAYLESGFLRDAIECYR--LTKEHKFRVPFDTCRKVI 108
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ L F ++ P +L FN++ + +G + A VF +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYP-----ASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
++ P +SFN L++ K G L E L M GV PD YTY +L++ + +++D
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
D F +M+D+GL PN + L+ + G +D A + M+ + L D +Y ++
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLI 283
Query: 271 KALSDGGKLDE 281
L G L +
Sbjct: 284 YGLCKKGDLKQ 294
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYXQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 101/252 (40%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMIPEAKXLIQIVVSRKGKGSASAVFAAJLETKGTQISD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +I+ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +LM + + + + F + GLRP++ +N L+ +++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE + M ++ D +Y ++ L K+D+ E+ +LD+G +
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|125558386|gb|EAZ03922.1| hypothetical protein OsI_26055 [Oryza sativa Indica Group]
Length = 658
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 10/313 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y ++ +DG +FE + ++ G ++ +Y +L+ G E+EAM +
Sbjct: 334 YVLVIGALCKDGKPFEGMAVFERMLKR--GCAANAAIYTALIDSMGKFGREKEAMALFER 391
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
++S +K+ +V +++ LC GK DEA+ F + K +AVN + + D
Sbjct: 392 M--KDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQE-----KGIAVNAIFYTSLID 444
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G+ G + E+F +M PD+ +N LID L K+G + +A LY M D G +
Sbjct: 445 GFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQ 504
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
YTY +L+D F+ ++ ++ ++ M+D G+ P A + L L G A
Sbjct: 505 TVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRIL 564
Query: 253 DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE 312
D + + + +++ M+ L G+ + ++ GI+ G E ++ + L K
Sbjct: 565 DELAPMGVIPETAHEDMINVLCKAGRFKQACKLADGIVQKGR-EIPGRVRTMMINALRKA 623
Query: 313 GREEEVVKLMEKK 325
G + VKL+ K
Sbjct: 624 GNTDLAVKLVHSK 636
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 13/327 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G ++Y+ L+ G V G D +F+ + + V D V Y L+KGY
Sbjct: 213 MRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTE-DQVRPDVVSYNILIKGYCRA 271
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE---HNPP 117
G +AM +E + E + + V +++ + G F + LF M+ ++ P
Sbjct: 272 GRAHDAMARLSE-MQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIP 330
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+ ++ ++ C G+ + + VF +M + C+ + + LID + K G E
Sbjct: 331 QH------AYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKE 384
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A L+ M D G+ D TYG++++ ++D+ FR + G+ N Y L+
Sbjct: 385 AMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLID 444
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+ GM+D++K F+ M+ K D Y ++ L+ G++D+ + + DDG +
Sbjct: 445 GFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQ 504
Query: 297 FSEELQEFVKGELSKEGREEEVVKLME 323
+ G L KE + EE +K +
Sbjct: 505 TVYTYTILIDG-LFKEHKNEEALKFWD 530
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 10/235 (4%)
Query: 51 GSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM 110
SL++ G+ EE + + + V+ S + N +LD L N G D A+ +FD M
Sbjct: 191 ASLIRSLAALGLAEELLWAWKAM--RLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAM 248
Query: 111 KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY-RCSPDTLSFNNLIDQL 169
E ++ ++ S+N++ GYC GR DA+ +M E + +PD +++ L+
Sbjct: 249 STE----DQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCH 304
Query: 170 CKNGMLAEAEELYGEMSDKGVNPD--EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
G L+ EM ++G+ D ++ Y L++ A + + +G F +M+ G
Sbjct: 305 YSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAA 364
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
N A+Y L+ + + G EA + F+ M LK+D +Y ++ L GKLDE
Sbjct: 365 NAAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDE 419
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 122/245 (49%), Gaps = 10/245 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ G+ + G + ++ ++ E G + V Y L+ GY E A+ Y
Sbjct: 287 VTYTSVISGYCKAGKMEDAMSVYNDMLE--SGTRPNTVTYNVLINGYGKALDMESAVRMY 344
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + + V +S++D C G+ D+A +++ M H P N+ +F+++
Sbjct: 345 RQLILRHCPPDV--VTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQP-----NVYTFSII 397
Query: 131 ADGYCGQGRFKDAIEVFRKMG-EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
C Q R +A+++ R++ +P T +N +ID LCK G + EA + +M +KG
Sbjct: 398 IHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKG 457
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+PD+YTY +L+ R+ + T F KMV++G RP+ N V +++ GM +E
Sbjct: 458 CHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNITVNSFVSCVLKAGMPNEVD 517
Query: 250 SFFDI 254
I
Sbjct: 518 QIMLI 522
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 132/276 (47%), Gaps = 19/276 (6%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV---VYGSLMKGYFMKGMEEEAMEC 69
Y +++ R G +LF+++ ++ G + G V GS G+ + A
Sbjct: 111 YIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNA----GLLDAASTL 166
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE--HNPPKRLAVNLGSF 127
+ G + A N +L++L +G+ +A+ LF+ + ++P ++ SF
Sbjct: 167 LTK--GSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSP------DVWSF 218
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
NV+ G C G F+ A+E+ +M E+ CSPDT++ N L+D LC+ + + E+ +
Sbjct: 219 NVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQR 278
Query: 188 KGVN-PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV-GKLVQVGML 245
GV P+ TY ++ + +++D + + M++SG RPN YN L+ G + M
Sbjct: 279 DGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDME 338
Query: 246 DEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ + ++++ D ++ ++ G+LD+
Sbjct: 339 SAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDD 374
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 150/355 (42%), Gaps = 45/355 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G +P Y+YL+ + G + LFE + G D + ++KG G +
Sbjct: 174 GCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQD-GLYSPDVWSFNVVIKGVCRMGNFQ 232
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+E S + +N ++D LC + ++ ++ R++ + N
Sbjct: 233 KALELVERMTEFGCSP--DTITHNILVDGLCRAKQVNKGHEVLRRLQRD----GVCMPNA 286
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGE-----------------------------YR- 154
++ + GYC G+ +DA+ V+ M E YR
Sbjct: 287 VTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQ 346
Query: 155 -----CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
C PD ++F++LID C+ G L +A+ ++ EM + P+ YT+ +++ + + NR
Sbjct: 347 LILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNR 406
Query: 210 VDDGATYFRKM-VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYK 267
+ R++ + + + P +YN ++ L + G +DEA D+ K D +Y
Sbjct: 407 SAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYT 466
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
++ G++ E + + +++ G + + FV L K G EV ++M
Sbjct: 467 ILIIGHCMKGRIPEAITLFHKMVEAGCRPDNITVNSFVSCVL-KAGMPNEVDQIM 520
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 37/214 (17%)
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE--HNPP------------------- 117
SV S + V+ LC +G+ +ALKLFD+M ++ + P
Sbjct: 103 SVPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDA 162
Query: 118 --------KRL--AVNLGSFNVMADGYCGQGRFKDAIEVFRKM---GEYRCSPDTLSFNN 164
RL + ++N + + GR +DA+ +F G Y SPD SFN
Sbjct: 163 ASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLY--SPDVWSFNV 220
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+I +C+ G +A EL M++ G +PD T+ +L+D +V+ G R++ G
Sbjct: 221 VIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDG 280
Query: 225 L-RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
+ PN Y ++ + G +++A S ++ M++
Sbjct: 281 VCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLE 314
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
AL++F + H+PP + + S+ + C GR +DA+++F +M +
Sbjct: 89 SALRIFSAL---HSPPLSVPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAG 145
Query: 162 FNNLIDQLCKN-GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
F + + C N G+L A L + S G + Y Y L+++ R D F
Sbjct: 146 FFSFVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESW 205
Query: 221 VDSGL-RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGK 278
+ GL P++ +N ++ + ++G +A + M + D ++ ++ L +
Sbjct: 206 IQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQ 265
Query: 279 LDEILEIVGGILDDG 293
+++ E++ + DG
Sbjct: 266 VNKGHEVLRRLQRDG 280
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 114/239 (47%), Gaps = 8/239 (3%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
V +GSL+ G+ + +A V S + + V N+++D LC NG+ + AL+L
Sbjct: 142 VTFGSLLHGFCLVNRIGDAFSLVILMV--KSGYEPNVVVYNTLIDGLCKNGELNIALELL 199
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
+ M+ K L ++ ++N + G C GR+ DA + R M + +PD ++F LID
Sbjct: 200 NEMEK-----KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
K G L EA+ELY EM V+P+ TY +++ R+ D F M G P
Sbjct: 255 VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
N+ YN L+ + M+DE F M + D +Y ++ GKL L+I
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 138/284 (48%), Gaps = 18/284 (6%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
G+ V + L+ GF R GD+ + L + G + VVY +L+ G G
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK-----SGYEPNVVVYNTLIDGLCKNG 190
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKRL 120
A+E NE E + V N++L LC +G++ +A ++ D MK NP
Sbjct: 191 ELNIALELLNEM--EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP---- 244
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +F + D + QG +A E++++M + P+ +++N++I+ LC +G L +A++
Sbjct: 245 --DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M+ KG P+ TY L+ + VD+G F++M G ++ YN L+
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEIL 283
QVG L A F MV +++ D ++ ++ L G+++ L
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 148/329 (44%), Gaps = 11/329 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G+ + VVY+ L+ G ++G+ + L E+++K G+ +D V Y +L+ G
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK--GLGADVVTYNTLLTGLCYS 224
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + + S+ V +++D G DEA +L+ M P +
Sbjct: 225 GRWSDAARMLRDMM--KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + +G C GR DA + F M C P+ +++N LI CK M+ E +
Sbjct: 283 -----TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ MS +G N D +TY L+ +V ++ F MV + P++ + L+ L
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397
Query: 241 QVGMLDEAKSFFDIMVKKLK-MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
G ++ A FD M + K + +Y M+ L K+++ E+ + +G +
Sbjct: 398 VNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDAR 457
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKERE 328
+ G L K G E +L+ + + E
Sbjct: 458 TYTIMILG-LCKNGPRREADELIRRMKEE 485
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 6/184 (3%)
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
+F++A LF M + P ++ F + R++ I +KM Y S D
Sbjct: 51 RFEDAFALFFEMVHSQPLP-----SIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
SF LI C+ L+ A + G+M G P T+G L+ VNR+ D +
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
MV SG PN+ VYN L+ L + G L+ A + M KK L D +Y ++ L G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 278 KLDE 281
+ +
Sbjct: 226 RWSD 229
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 9/187 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ L+ GF + D +LF+ + + G +D Y +L+ GY G
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE--GFNADIFTYNTLIHGYCQVGKL 367
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A++ + V V + + +L LC NG+ + AL FD M+ +
Sbjct: 368 RVALDIFCWMVSRR--VTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK-----YIG 420
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N+M G C + + A E+F ++ PD ++ +I LCKNG EA+EL
Sbjct: 421 IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIR 480
Query: 184 EMSDKGV 190
M ++G+
Sbjct: 481 RMKEEGI 487
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 154/355 (43%), Gaps = 48/355 (13%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + +Y L+ G+ +G + + + GV D ++ + Y K M
Sbjct: 301 KGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVG--NGVSPDHHIFNIMFCAYAKKAMI 358
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP-----K 118
+EAM +++ + S + V +++DALC G+ D+A+ F++M +E P
Sbjct: 359 DEAMHIFDKMRQQRLSPNI--VTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFS 416
Query: 119 RLAVNLGS-------------------------FNVMADGYCGQGRFKDAIEVFRKMGEY 153
L L + FN + C +GR +A + M
Sbjct: 417 SLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRV 476
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
PD +S+N L+D C G + EA +L + G+ PD+ TY L+ + R+DD
Sbjct: 477 GVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDA 536
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKA 272
+ FR+M+ GL P++ YN ++ L Q G EAK + M+ + +M+ +Y ++
Sbjct: 537 YSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIING 596
Query: 273 LSDGGKLDEILEIVGGILDDGGIEFSEELQ------EFVKGELSKEGREEEVVKL 321
L +DE ++ + S++LQ + G L K GR+E+ + L
Sbjct: 597 LCKNNFVDEAFKMFHSLC-------SKDLQLDIFTANIMIGALLKGGRKEDAMDL 644
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 138/293 (47%), Gaps = 16/293 (5%)
Query: 7 VADPVVYSYLMLGFV----RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V D V++S L+ G D +D + R E G D Y L+KG+ +
Sbjct: 125 VNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEF-----GCTPDVFSYSILLKGFCNEKR 179
Query: 63 EEEAMECYNEAVGE-NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
EEA+E + + + S + V +V+D LC D A +F M ++ P
Sbjct: 180 AEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRP---- 235
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N ++ + GY G++K+ +++ ++M + PD + L+D LCKNG EA +
Sbjct: 236 -NNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNI 294
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ + KG+ P+ YG+L+ + + ++ MV +G+ P+ ++N + +
Sbjct: 295 FDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAK 354
Query: 242 VGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
M+DEA FD M ++L + +Y ++ AL G++D+ + ++D+G
Sbjct: 355 KAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEG 407
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 146/316 (46%), Gaps = 15/316 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ G + D +F+ + +K GV + Y L+ GY G +E ++
Sbjct: 203 VTYTTVIDGLCKAQMVDRAKGVFQHMIDK--GVRPNNHTYTCLIHGYLSIGKWKEVVQML 260
Query: 71 NE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
E G + AV +LD LC NG+ EA +FD + + P N+ +
Sbjct: 261 QEMSTHGLQPDCYIYAV----LLDYLCKNGRCTEARNIFDSVIRKGIKP-----NVTIYG 311
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
++ GY +G + M SPD FN + K M+ EA ++ +M +
Sbjct: 312 ILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQ 371
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
++P+ TYG L+DA ++ RVDD F +M+D G+ P++ V++ LV L V ++A
Sbjct: 372 RLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKA 431
Query: 249 KS-FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+ FF+++ + +++D + +M L G++ E ++ +L G V G
Sbjct: 432 EELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDG 491
Query: 308 ELSKEGREEEVVKLME 323
GR +E KL++
Sbjct: 492 H-CLTGRIDEAAKLLD 506
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 146/312 (46%), Gaps = 10/312 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V+S L+ G + LF E+ ++ G+ D V + +LM +
Sbjct: 403 MIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQ--GIRLDTVFFNTLMCNLCRE 460
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + + V+ ++ N+++D C G+ DEA KL D + + P ++
Sbjct: 461 GRVMEAQRLIDLML--RVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKV 518
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + GYC R DA +FR+M +PD +++N ++ L + G +EA+E
Sbjct: 519 -----TYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKE 573
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY M + + YTY ++++ + N VD+ F + L+ ++ N ++G L+
Sbjct: 574 LYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALL 633
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G ++A F I L D +Y + + L G L+E+ E+ + ++G S
Sbjct: 634 KGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSR 693
Query: 300 ELQEFVKGELSK 311
L V+ L +
Sbjct: 694 MLNALVRWLLHR 705
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 89/271 (32%), Gaps = 77/271 (28%)
Query: 100 FDEALKLFDRMKNEHNPPK------------------------------------RLAVN 123
++ALKLFD M P ++A +
Sbjct: 32 LNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPS 91
Query: 124 LGSFNVMADGYCGQGRFKDAIEVF------------------------------------ 147
++ ++ +C GR K F
Sbjct: 92 SFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDIL 151
Query: 148 -RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG---VNPDEYTYGLLMDA 203
R+M E+ C+PD S++ L+ C EA EL M+D G P+ TY ++D
Sbjct: 152 LRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDG 211
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMD 262
+ VD F+ M+D G+RPN Y L+ + +G E M L+ D
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDG 293
Y ++ L G+ E I ++ G
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKG 302
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 141/300 (47%), Gaps = 35/300 (11%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V+Y+ ++ G +D + F + E+ K + V Y +L+ G + G ++A+
Sbjct: 208 DVVMYNTIIDGVCKDKLVNDAFDFYSEMVAK--RICPTVVTYNTLICGLCIMGQLKDAIG 265
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN----- 123
++ + EN + + + ++DA C GK EA +F M + P + N
Sbjct: 266 LLHKMILEN--INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNG 323
Query: 124 -------------------------LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
+ S+++M G+C +A+++F +M + PD
Sbjct: 324 YCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPD 383
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
+++N+LID LCK+G ++ A +L GEM D+G P+ TY L+DA + + VD
Sbjct: 384 VVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLT 443
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGG 277
K+ D ++P++ YN L+ L + G L +A+ F D++V +D +Y M+K G
Sbjct: 444 KLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 155/335 (46%), Gaps = 33/335 (9%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G ++ V S L+ F + G + F +F + +K G D + +L+KG +KG
Sbjct: 99 GIASNLVTLSILINCFSQLGHNSLSFSVFSNILKK--GYEPDAITLTTLIKGLCLKGDIH 156
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ +++ + +++ V+ ++++ LC G+ AL++ R+ K + +++
Sbjct: 157 KALHFHDKVLAL--GFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDG-----KLVRLDV 209
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+N + DG C DA + + +M R P +++N LI LC G L +A L +
Sbjct: 210 VMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHK 269
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + +NP YT+ +L+DA + +V + F M+ ++PN+ YN L+ V
Sbjct: 270 MILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNE 329
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILE------------------- 284
+++A+S F+ M + + D SY M+ +DE ++
Sbjct: 330 VNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNS 389
Query: 285 IVGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
++ G+ G I ++ +L GE+ G+ ++
Sbjct: 390 LIDGLCKSGRISYALKLI----GEMHDRGQPPNII 420
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 150/320 (46%), Gaps = 10/320 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D + + L+LGF R + ++F+ + +++ + V Y L+ G G E
Sbjct: 225 GFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVT-CAPNSVSYSILIHGLCEVGRLE 283
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + +GE + S ++ ALC+ G D+A LFD M P+ N+
Sbjct: 284 EAFG-LKDQMGEKGC-QPSTRTYTVLIKALCDRGLIDKAFNLFDEMI-----PRGCKPNV 336
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ V+ DG C G+ ++A V RKM + R P +++N LI+ CK+G + A EL
Sbjct: 337 HTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTV 396
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + P+ T+ LM+ V + ++M+D+GL P++ YN L+ L + G
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 245 LDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
++ A M ++ D ++ ++ A GK D +G +L GI E
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRK-GISLDEVTGT 515
Query: 304 FVKGELSKEGREEEVVKLME 323
+ + K G+ + + ++E
Sbjct: 516 TLIDGVCKVGKTRDALFILE 535
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 148/324 (45%), Gaps = 15/324 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG Y+ L+ G D F LF+E+ + G + Y L+ G G
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPR--GCKPNVHTYTVLIDGLCRDGKI 352
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EEA + V + + S + N++++ C +G+ A +L M+ P N
Sbjct: 353 EEANGVCRKMVKDR--IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKP-----N 405
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN + +G C G+ A+ + ++M + SPD +S+N LID LC+ G + A +L
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLS 465
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M+ + PD T+ +++A + + D + + M+ G+ + L+ + +VG
Sbjct: 466 SMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVG 525
Query: 244 MLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGI----LDDGGIEFS 298
+A + +VK ++ S ++ LS G K+ E L ++G I L + ++
Sbjct: 526 KTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYT 585
Query: 299 EELQEFVK-GELSKEGREEEVVKL 321
+ ++ G+++ R E++KL
Sbjct: 586 TLVDGLIRSGDITGSFRILELMKL 609
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 137/353 (38%), Gaps = 63/353 (17%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V Y+ L+ G R+G + ++L + + D + + +++ + +
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN--CFDIEPDCLTFTAIINAFCKQ 489
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH--NPPK 118
G + A + + + V +++D +C GK +AL + + + P
Sbjct: 490 GKADVASAFLGLML--RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547
Query: 119 RLAVNLG----------------------------SFNVMADGYCGQGRFKDAIEVFRKM 150
L V L ++ + DG G + + M
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
C P+ + +I+ LC+ G + EAE+L M D GV+P+ TY +++ ++
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLV--QVGMLD-EAKSFFDIMVKKLKMDDASYK 267
D R MV+ G N +Y+ L+ V Q G+ + E + DI +++
Sbjct: 668 DRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRE--------- 718
Query: 268 FMMKALSDGGKLDEILEIV---GGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+D ++E++ +V GG + I F+ L KEGR +E
Sbjct: 719 ------TDPECINELISVVEQLGGCISGLCI--------FLVTRLCKEGRTDE 757
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 129/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 195 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDDANELFDEML-----VKGLVPNG 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
F + DG+C GR A+E++++M PD +++N LI LCK G L + L E
Sbjct: 248 VIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 308 MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGR 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 368 SVDAEKMLREMLNVGLKPDARTYTMIINEFCKKG 401
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V +GV++ +L+ G+
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLVPNGVIFTTLIDGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G + L D M + P ++
Sbjct: 261 GRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKI 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 319 -----TYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM + G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 374 MLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E+
Sbjct: 75 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL 134
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP++ YN L+ +++G LD
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E M+ ++ D +Y ++ L K+D+ E+ +L G + +
Sbjct: 195 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLI 254
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 255 DGH-CKNGR 262
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F+ + + G+ V Y +LM GY G +
Sbjct: 133 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 190
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + + S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 191 EGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMDDANELFDEML-----VKGLVPNG 243
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCK G L +A L E
Sbjct: 244 VTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDE 303
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +D + ++M+ + + Y L+ L Q G
Sbjct: 304 MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGR 363
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 364 SVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKG 397
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 112/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V +GV + +L+ G+
Sbjct: 199 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLVPNGVTFTTLIDGHCKN 256
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + S+ + N+++ LC G +A L D M + P ++
Sbjct: 257 GRVDLAMEIYKRMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKI 314
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 315 -----TYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEK 369
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ P+ TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 370 MLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 425
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG V + V ++ L+ G ++G D +++ + + ++ D + Y +L+ G K
Sbjct: 234 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQ--SLLPDLITYNTLIYGLCKK 291
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A +E +K + +++D C G D A + RM E+ +
Sbjct: 292 GDLKQAHHLIDEM--SMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN-----I 344
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + G C +GR DA ++ R+M P+ ++ +I++ CK G + + +
Sbjct: 345 XLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSK 404
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L EM G P TY +LM+
Sbjct: 405 LLKEMQRDGHVPSVVTYNVLMN 426
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 97/252 (38%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 8 NSTFRHTLHSYCTMIHFLCTHQMLSEAKXLIQVVVSRKGKGSASAVFAAILETKGTQRSD 67
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y +DAIE +R E++ + +++ L K Y
Sbjct: 68 IFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYK 127
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ + G Y + +LM + + + F + GLRP++ YN L+ +++G
Sbjct: 128 XILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 187
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M+ ++ D +Y ++ L K+D+ E+ +L G +
Sbjct: 188 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFT 247
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 248 TLIDGH-CKNGR 258
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 134/287 (46%), Gaps = 10/287 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ G+ + G S +F E+ +K G++ D V + SL+
Sbjct: 286 MVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQK--GIMPDVVTFTSLIHVMCKA 343
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A+ + ++M+ V +++D C G D+AL MK R+
Sbjct: 344 GNLERAVTLVRQM--RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQ-----CRI 396
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +N + +GYC GR +A E+ +M PD ++++ +I CKN A E
Sbjct: 397 KPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFE 456
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M +KGV PD TY L+ R+ D F+ M+ GL+P+ Y L+
Sbjct: 457 LNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHC 516
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIV 286
+ G ++ A S D MVK + D +Y ++ LS + E +++
Sbjct: 517 KEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 563
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 132/289 (45%), Gaps = 16/289 (5%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY+Y L+ G + +++ G + V Y +L+ +F G + A
Sbjct: 188 PNVYTYNILVRALCGRGHRKEALSILRDMRG--AGCGPNVVTYNTLVAAFFRAGEVDGA- 244
Query: 68 ECYNEAVG--ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
VG +K + V NS+++ +C GK ++A K+FD M E P +
Sbjct: 245 ---ERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGV----- 296
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
S+N + GYC G +A+ VF +M + PD ++F +LI +CK G L A L +M
Sbjct: 297 SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQM 356
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
++G+ +E T+ L+D + +DD R M ++P++ YN L+ VG +
Sbjct: 357 RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRM 416
Query: 246 DEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
DEA+ M K LK D +Y ++ A E+ +L+ G
Sbjct: 417 DEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 465
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 11/283 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+V + Y+ ++L D R F+ + GV + Y L++ +G +
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSD--GVAPNVYTYNILVRALCGRGHRK 207
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ + G + V N+++ A G+ D A +L M+ P NL
Sbjct: 208 EALSILRDMRGAGCGPNV--VTYNTLVAAFFRAGEVDGAERLVGMMREGGLKP-----NL 260
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN M +G C G+ +DA +VF +M +PD +S+N L+ CK G EA ++ E
Sbjct: 261 VTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAE 320
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ KG+ PD T+ L+ + ++ T R+M + GL+ N + L+ + G
Sbjct: 321 MTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 380
Query: 245 LDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIV 286
LD+A M + ++K Y ++ G++DE E++
Sbjct: 381 LDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELL 423
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 133/309 (43%), Gaps = 25/309 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V YS ++ + ++ D+ F L +++ EK GV+ D + Y SL++ +
Sbjct: 426 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK--GVLPDAITYSSLIRVLCGE 483
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A + + ++ S++D C G + AL L D+M P
Sbjct: 484 KRLSDAHVLFKNMI--KLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLP--- 538
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ------------ 168
++ +++V+ +G R +A ++ K+ P ++ L+
Sbjct: 539 --DVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLAL 596
Query: 169 ---LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
C G++ EA+++Y M D+ N D Y +L+ V ++ ++M+ G
Sbjct: 597 LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGF 656
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILE 284
PN L+ L + GM+ EA ++ + DA + K ++ + G +D +L+
Sbjct: 657 APNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLD 716
Query: 285 IVGGILDDG 293
++ G+ DG
Sbjct: 717 VLHGMAKDG 725
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 133/320 (41%), Gaps = 25/320 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V ++ L+ GF + G D +K+ + V Y +L+ GY M G
Sbjct: 359 RGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQ--CRIKPSVVCYNALINGYCMVGRM 416
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA E +E E +K V ++++ A C N A +L +M + P +
Sbjct: 417 DEARELLHEM--EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAI--- 471
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++ + CG+ R DA +F+ M + PD ++ +LID CK G + A L+
Sbjct: 472 --TYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHD 529
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV-----GK 238
+M GV PD TY +L++ + R + K+ P Y+ L+ +
Sbjct: 530 KMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAE 589
Query: 239 LVQV----------GMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
L V G+++EA + M+ + +D + Y ++ G + + L
Sbjct: 590 LKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHK 649
Query: 288 GILDDGGIEFSEELQEFVKG 307
+L G S ++G
Sbjct: 650 QMLQGGFAPNSTSTISLIRG 669
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 102/241 (42%), Gaps = 20/241 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ L+ G ++G+ + L +++ + GV+ D V Y L+ G
Sbjct: 496 MIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVK--AGVLPDVVTYSVLINGLSKS 553
Query: 61 GMEEEAMECYNEAVGEN---SSVKMSAVANN----------SVLDALCNNGKFDEALKLF 107
EA + + E+ ++ K A+ + ++L C G +EA K++
Sbjct: 554 ARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVY 613
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
M + + ++ ++V+ G+C G A+ ++M + +P++ S +LI
Sbjct: 614 QSMLD-----RNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIR 668
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
L +NGM+ EA+++ ++ + D L+D VD M GL P
Sbjct: 669 GLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728
Query: 228 N 228
+
Sbjct: 729 S 729
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 132/269 (49%), Gaps = 13/269 (4%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
Y L++G+ G ++ + C+ E E + + V N+++DA C G+ DEA L
Sbjct: 12 TYNILIRGFCSVGELQKGLGCFGEM--ERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLK 69
Query: 109 RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
M ++ P NL S+NV+ +G C +G K+A E+ +MG +PD +++N L++
Sbjct: 70 SMSSKGMQP-----NLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
CK G +A ++ EM GV+P TY L+++ + ++ +F +M GLRPN
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVG 287
Y L+ + G+L+EA + M + +Y + +++E L +V
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 244
Query: 288 GILDDG----GIEFSEELQEFV-KGELSK 311
+++ G + +S + F KGEL +
Sbjct: 245 EMVEKGLAPDVVSYSTIISGFCRKGELDR 273
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 146/312 (46%), Gaps = 35/312 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + + Y+ ++ G R+G + + EE+ K G D V Y +L+ GY +
Sbjct: 71 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK--GFTPDEVTYNTLLNGYCKE 128
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEH 114
G +A+ + E V + V S V ++++++C + A++ FD+M+ NE
Sbjct: 129 GNFHQALVIHAEMV--RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186
Query: 115 ---------------NPPKRL---------AVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
N R+ + ++ ++N G+C R ++A+ V ++M
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E +PD +S++ +I C+ G L A ++ EM +KGV+PD TY L+ E+ R+
Sbjct: 247 VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 306
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFM 269
+ ++M+D GL P+ Y L+ G L++A D M+ K + DA +Y +
Sbjct: 307 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVL 366
Query: 270 MKALSDGGKLDE 281
+ L+ + E
Sbjct: 367 INGLNKQARTRE 378
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 6/251 (2%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S V + N ++ C+ G+ + L F M+ P N+ ++N + D YC
Sbjct: 4 SRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLP-----NVVTYNTLIDAYCKM 58
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
GR +A + + M P+ +S+N +I+ LC+ G + EA E+ EM KG PDE TY
Sbjct: 59 GRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTY 118
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-V 256
L++ + +MV +G+ P++ Y L+ + + L+ A FFD M +
Sbjct: 119 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
+ L+ ++ +Y ++ S G L+E I+ + + G F+ G E EE
Sbjct: 179 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEE 238
Query: 317 EVVKLMEKKER 327
+ + E E+
Sbjct: 239 ALGVVQEMVEK 249
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 153/358 (42%), Gaps = 29/358 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G + Y+ L+ GF R G + +R+ E+ E G V Y + + G+ +
Sbjct: 176 MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES--GFSPSVVTYNAFIHGHCVL 233
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA+ E V + V+ ++++ C G+ D A ++ M + P +
Sbjct: 234 ERMEEALGVVQEMV--EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAV 291
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ + G C R +A ++ ++M + PD ++ LI+ C G L +A
Sbjct: 292 -----TYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 346
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM KG PD TY +L++ + R + K++ P+ Y+ L+
Sbjct: 347 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 406
Query: 241 QV---------------GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILE 284
+ G++ EA F+ MV++ K +A Y ++ GG L +
Sbjct: 407 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 466
Query: 285 IVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEA 342
+ ++ G + + + +K L KEG EE+ +++ R + EAE A+
Sbjct: 467 LYKEMIHSGFVPHTVTVITLIKA-LFKEGMNEEMSEVIGDTLR---SCRLNEAELAKV 520
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 141/287 (49%), Gaps = 10/287 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG D Y +L+ + G F+ + E+ G+ + Y LM +
Sbjct: 126 MKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLER--GLTPNIPTYNLLMDAFRKV 183
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+ + E + + S V N +LDALC+ G+ A KLF +M + P
Sbjct: 184 GQLDMALGLFAEM--KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSY 241
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ + +G GR ++A +VFR+M + + D +++N+L+ L K G + +
Sbjct: 242 -----TYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWK 296
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EMS KG +PD +++ +MDA + N+ D F +MV+SG +P+L YN L+
Sbjct: 297 LMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYA 356
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+ G +A+ + MV+ + +Y ++ L+ G++DE ++
Sbjct: 357 RFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVL 403
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 137/291 (47%), Gaps = 12/291 (4%)
Query: 6 FVADPVVYSYLMLG--FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
F P V+++ L V G+ + ++++L +K G D Y L++ + G
Sbjct: 59 FACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQK--GCQLDRFAYNVLIRYFGRSGQL 116
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ AME + E + S + +++AL G+ EA FD M P N
Sbjct: 117 DSAMEMFREMKIKGS--EPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTP-----N 169
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N++ D + G+ A+ +F +M P +++N L+D LC G + A +L+
Sbjct: 170 IPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFH 229
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M+ G +PD YTY L++ + RV++ FR+MVD G+ +L YN L+ L + G
Sbjct: 230 KMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAG 289
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+D M +K DA S+ +M AL K D E+ +++ G
Sbjct: 290 NMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESG 340
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 9/251 (3%)
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E V E ++ + + ++ A K +A LF++ ++ P + +F +
Sbjct: 20 EMVAEGRPLRPNTLVK--LITAYGRGNKSGDAFDLFNQAESFACSP-----TVHAFTKLI 72
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
D G F+ A V++K+ + C D ++N LI ++G L A E++ EM KG
Sbjct: 73 DILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSE 132
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
PDEYTYG L++A + RV + ++F M++ GL PN+ YN L+ +VG LD A
Sbjct: 133 PDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGL 192
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELS 310
F M ++ + +Y ++ AL G++ ++ + DG S V G L
Sbjct: 193 FAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNG-LG 251
Query: 311 KEGREEEVVKL 321
K GR EE K+
Sbjct: 252 KSGRVEEAHKV 262
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 120/274 (43%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D YS L+ G + G + ++F E+ ++ GV D V Y SL+ G +
Sbjct: 235 GCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDR--GVAVDLVNYNSLLATLAKAGNMD 292
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ E A + N+++DAL K D A ++F RM P +L
Sbjct: 293 RVWKLMKEM--SRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKP-----DL 345
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S+N++ D Y G A ++ +M E P+T ++N+LI L +G + EA + E
Sbjct: 346 ISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEE 405
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G PD TY LMD + A F++M D G+ P+ Y + L
Sbjct: 406 METAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDR 465
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGG 277
LDEA F D+ +D A Y+ +++A G
Sbjct: 466 LDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAG 499
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++ D +F+ + + G+ V Y +LM GY G +
Sbjct: 119 GYPASLYFFNILMHRFCKERDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 176
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++ S V+ + +++ LC K D+A +LFD M K L N
Sbjct: 177 EGFRL--KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEM-----LVKGLVPNG 229
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCK G L +A +L E
Sbjct: 230 VTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 289
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 290 MSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 349
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 350 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 383
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V +GV + +L+ G+
Sbjct: 185 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLVPNGVTFTTLIDGHCKN 242
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+E Y + + + S+ + N+++ LC G +A L D M + P ++
Sbjct: 243 GRVDLALEIYKQMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 300
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 301 -----TYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 355
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
+ EM G+ PD TY ++++
Sbjct: 356 MLREMLSVGLKPDARTYTMIIN 377
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG V + V ++ L+ G ++G D +++++ + ++ D + Y +L+ G K
Sbjct: 220 MLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQ--SLLPDLITYNTLIYGLCKK 277
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A + +E +K + +++D C G D A + RM E+ +
Sbjct: 278 GDLKQAHDLIDEM--SMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQEN-----I 330
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + G C +GR DA ++ R+M PD ++ +I++ CK G + + +
Sbjct: 331 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSK 390
Query: 181 LYGE 184
L E
Sbjct: 391 LLKE 394
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E+
Sbjct: 57 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL 116
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP++ YN L+ +++G LD
Sbjct: 117 ESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 176
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E M ++ D +Y ++ L K+D+ E+ +L G + +
Sbjct: 177 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 236
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 237 DGH-CKNGR 244
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 10/273 (3%)
Query: 10 PVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMEC 69
P +S L+ + + G ++ F ++K+ G D Y S++ K + A+
Sbjct: 131 PPTFSVLIAAYAKSGMAEKAVESFGKMKD--FGCKPDVFTYNSILHVMVQKEVFLLALAV 188
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
YN+ + N + + +L+ LC NGK D+ALK+FD M + PP N + +
Sbjct: 189 YNQMLKLNYNPNRATFV--ILLNGLCKNGKTDDALKMFDEMTQKGIPP-----NTMIYTI 241
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ G C R D + M C PD+++ N L+D CK G + EA L +G
Sbjct: 242 ILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEG 301
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
Y L+D F R D+ + RKM +G+ P++ +Y L+ +VGM+D A
Sbjct: 302 YVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYAL 361
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ + M ++ L D Y ++K D G LD+
Sbjct: 362 NMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDK 394
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 50/303 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF-- 58
MF G D V+Y+ L+ GF G D + ++ ++ G+ D Y +L+KG+
Sbjct: 332 MFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQR--GLSPDTYCYNALIKGFCDV 389
Query: 59 ---------------------------------MKGMEEEAMECYNEAVGENSSVKMSAV 85
G+ +EA + +N+ EN S +
Sbjct: 390 GLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQM--ENLGCSPSIM 447
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG--------SFNVMADGYCGQ 137
N+++D LC G+ +EA LF +M+ NP L ++ G S M + C
Sbjct: 448 TFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCES 507
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G A ++ ++ + PD +++N LI+ CK + A +L+ E+ KG +PD TY
Sbjct: 508 GLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTY 567
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
G L+D V+R +D +MV +G P+ AVY L+ + G L A F + +K
Sbjct: 568 GTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVA---FSLWLK 624
Query: 258 KLK 260
L+
Sbjct: 625 YLR 627
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 134/309 (43%), Gaps = 23/309 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + ++Y+ ++ G + +D V RL +K + G D + +L+ G+
Sbjct: 227 MTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMK--VSGCCPDSITCNALLDGFCKL 284
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA + E + +S++D L ++DE + +M P
Sbjct: 285 GQIDEAFALLQ--LFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEP--- 339
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + ++ G+C G A+ + M + SPDT +N LI C G+L +A
Sbjct: 340 --DVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARS 397
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L E+S P TY +L+ +D+ F +M + G P++ +N L+ L
Sbjct: 398 LQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLC 457
Query: 241 QVGMLDEAKSFFDIM--------VKKLK------MDDASYKFMMKALSDGGKLDEILEIV 286
+ G L+EA+ F M +L MD AS + M++ L + G + + +++
Sbjct: 458 KAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLL 517
Query: 287 GGILDDGGI 295
+ D G +
Sbjct: 518 MQLADSGVV 526
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 117/256 (45%), Gaps = 27/256 (10%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNE--HNPPKRLAVNLGSFNVMADGYCGQGRF 140
S V +N V+D L + FD K+ + +KN PP +F+V+ Y G
Sbjct: 95 SWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPP-------TFSVLIAAYAKSGMA 147
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
+ A+E F KM ++ C PD ++N+++ + + + A +Y +M NP+ T+ +L
Sbjct: 148 EKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVIL 207
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKL 259
++ + + DD F +M G+ PN +Y ++ L Q D+ + M V
Sbjct: 208 LNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGC 267
Query: 260 KMDDASYKFMMKALSDGGKLDE---ILEI------VGGI-----LDDGGIEFS--EELQE 303
D + ++ G++DE +L++ V GI L DG +E+QE
Sbjct: 268 CPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQE 327
Query: 304 FVKGELSKEGREEEVV 319
+ + ++ K G E +VV
Sbjct: 328 WCR-KMFKAGIEPDVV 342
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 33/214 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V D + Y+ L+ GF + + +G F+LF EL+ L G D V YG+L+ G+ EE
Sbjct: 524 GVVPDIMTYNVLINGFCKAKNINGAFKLFRELQ--LKGHSPDSVTYGTLIDGFHRVDREE 581
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF------------------DEALKL 106
+A ++ V +N SAV ++ C GK DE LKL
Sbjct: 582 DAFRVLDQMV-KNGCTPSSAVYK-CLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKL 639
Query: 107 ----FDRMKNEHNPPKRLAVN-------LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
F++ + E L +N + + + G C R ++A+++F + E +
Sbjct: 640 AEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQM 699
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ S LI+ LCK+G L A +++ +KG
Sbjct: 700 DVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKG 733
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 133/253 (52%), Gaps = 19/253 (7%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+K V NS++D + ++A +F+ M P ++ S++++ +G+C
Sbjct: 208 IKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSP-----DIQSYSILINGFCKIKM 262
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+A+E+ ++M + P+ +++++LID LCK+G ++ A +L EM D+G P+ TY
Sbjct: 263 MDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSS 322
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKK 258
++DA + ++VD+ +M + G++PN+ Y L+ L Q G L++A+ F D++VK
Sbjct: 323 ILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKG 382
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
++ +Y M++ D G DE L ++ + D+G I + + E +
Sbjct: 383 HNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIP-------------NAKTYEIII 429
Query: 319 VKLMEKKEREKAE 331
+ L +K E E AE
Sbjct: 430 LSLFKKDENEMAE 442
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 6/220 (2%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN-----LGSFNVMADGY 134
+K + V N ++++ C G A + ++ P + +N L + D +
Sbjct: 93 IKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKH 152
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G+ KDA+++F KM +PD +F L+D CK G + EA+ + M +G+ P
Sbjct: 153 CIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGV 212
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-D 253
TY LMD F V +V+ + F M G+ P++ Y+ L+ ++ M+DEA +
Sbjct: 213 VTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKE 272
Query: 254 IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ K++ + +Y ++ L GK+ L++V + D G
Sbjct: 273 MHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRG 312
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 9/239 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D YS L+ GF + D L +E+ K ++ + V Y SL+ G G
Sbjct: 242 GVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHK--QIIPNVVTYSSLIDGLCKSGKIS 299
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ +E + + V +S+LDALC N + D A+ L +MKN+ P N+
Sbjct: 300 YALKLVDEM--HDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQP-----NM 352
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ ++ G C G+ +DA +VF + + + ++ +I C G+ EA L +
Sbjct: 353 YTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSK 412
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M D G P+ TY +++ + F+ + + +M+++ +A+ N L+ + G
Sbjct: 413 MEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTG 471
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 123/309 (39%), Gaps = 57/309 (18%)
Query: 96 NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR- 154
NN D+A+ LF+R+ ++ P + FN + + + + +KM E+R
Sbjct: 39 NNNDVDDAVSLFNRLLQQNPTPPNI-----EFNKILGSLVKSKHYHTVLYLSQKM-EFRG 92
Query: 155 CSPDTLSFNNLIDQLCKNGM---------------------------------------- 174
P+ ++ N LI+ C+ G
Sbjct: 93 IKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKH 152
Query: 175 -----LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
L +A +L+ +M + +NPD YT+ +L+D + RV + M+ G++P +
Sbjct: 153 CIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGV 212
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGG 288
YN L+ V +++AKS F+ M + + D SY ++ +DE +E++
Sbjct: 213 VTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKE 272
Query: 289 ILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM-EKKEREKAEAKAREAEAAEAAKRSA 347
+ I + G L K G+ +KL+ E +R + + +A ++
Sbjct: 273 MHHKQIIPNVVTYSSLIDG-LCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNH 331
Query: 348 RA--AIASL 354
+ AIA L
Sbjct: 332 QVDNAIALL 340
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 165/361 (45%), Gaps = 50/361 (13%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V+Y+ ++ +D ++L+ E+ K + D V + SL+ G+ + G +EA
Sbjct: 197 TDVVMYNIIINSLCKDKAVSDAYQLYSEMITK--RISPDVVTFNSLILGFCVVGQLKEAF 254
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK---------------- 111
++E V +N + + ++DALC +G A + M
Sbjct: 255 GLFHEMVLKN--INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMD 312
Query: 112 -----NEHNPPKRL---------AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
NE N K + A + S+N+M +G +A+ +F++M +P
Sbjct: 313 GYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAP 372
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
DT+++N+LID LCK G ++ A +L EM + G+ D TY L+D + + +D
Sbjct: 373 DTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALV 432
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDG 276
+K+ D G++P++ YN L+ L + G L A+ F D+++K ++ +Y M+ L
Sbjct: 433 KKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKE 492
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK-LMEKKEREKAEAKAR 335
G +E E++ +++ GI + E +++ L K E EKAE R
Sbjct: 493 GLFNEA-EVLLSKMENNGI-------------IPDAVTYETIIRALFRKDENEKAEKLLR 538
Query: 336 E 336
E
Sbjct: 539 E 539
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 125/249 (50%), Gaps = 8/249 (3%)
Query: 46 DGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK 105
D V Y +L+ G G A++ + G+ V V N ++++LC + +A +
Sbjct: 163 DQVSYRTLINGLCKIGETRAALQMLKKIEGK--LVNTDVVMYNIIINSLCKDKAVSDAYQ 220
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
L+ M KR++ ++ +FN + G+C G+ K+A +F +M +PD +F+ L
Sbjct: 221 LYSEMIT-----KRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSIL 275
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+D LCK+G + A+ + M +GV PD TY LMD VN V+ F M G+
Sbjct: 276 VDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGV 335
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILE 284
P+ YN ++ L ++ M+DEA S F ++ K + D +Y ++ L G++ +
Sbjct: 336 APHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQ 395
Query: 285 IVGGILDDG 293
+V + ++G
Sbjct: 396 LVDEMHNNG 404
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 9/213 (4%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ ++ G + D LF+E+ K G+ D V Y SL+ G G A + +E
Sbjct: 342 YNIMINGLGKIKMVDEALSLFKEMCCK--GIAPDTVTYNSLIDGLCKLGRISYAWQLVDE 399
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
N+ + + NS++D LC N D+A+ L ++K++ P ++ ++N++ D
Sbjct: 400 M--HNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQP-----SMYTYNILID 452
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G C GR K+A +VF+ + S + ++N +I+ LCK G+ EAE L +M + G+ P
Sbjct: 453 GLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIP 512
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
D TY ++ A F + + R+M+ GL
Sbjct: 513 DAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 9/241 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + D V YS LM G+ + + +F + GV Y ++ G
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRL--GVAPHAHSYNIMINGLGKI 352
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M +EA+ + E + + V NS++D LC G+ A +L D M N P L
Sbjct: 353 KMVDEALSLFKEMCCK--GIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADIL 410
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + D C AI + +K+ + P ++N LID LCK G L A++
Sbjct: 411 -----TYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQD 465
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ ++ KG + + +TY ++++ + ++ KM ++G+ P+ Y ++ L
Sbjct: 466 VFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALF 525
Query: 241 Q 241
+
Sbjct: 526 R 526
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 43/251 (17%)
Query: 83 SAVANNSVLDALC--NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRF 140
S V N +L ++ NN + A+ L +++ K + + +FN++ + YC G
Sbjct: 56 SIVEFNKILGSIVKANNNHYTTAISLSHQLE-----LKGITPTIVTFNILVNCYCHLGEM 110
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG----------- 189
A +F K+ + P T++FN LI+ +C NG L EA + + G
Sbjct: 111 TFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTL 170
Query: 190 ------------------------VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
VN D Y +++++ + V D + +M+ +
Sbjct: 171 INGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRI 230
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILE 284
P++ +N L+ VG L EA F MV K + D ++ ++ AL G +
Sbjct: 231 SPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKN 290
Query: 285 IVGGILDDGGI 295
++ ++ G I
Sbjct: 291 MLAVMMKQGVI 301
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 10/276 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ ++ L+ G +G +LF+++ + G D + YG+L+ G G
Sbjct: 119 GYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE--GFQPDVLTYGTLINGLCKVGNTS 176
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ E + + + V ++++D+LC + + EAL LF M + P
Sbjct: 177 TAIRFLRSM--EQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNF---- 230
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + G C G +K+AI +F M + PD L+FN L+D LCK GM+ +A +
Sbjct: 231 -TYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDV 289
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + PD TY LMD + + F MV G P++ Y L+ ++ +
Sbjct: 290 MIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQI 349
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
+D+A F+ M ++ L D +Y ++ L G+L
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 385
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 7/207 (3%)
Query: 46 DGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK 105
D V Y SLM G+ ++ + + ++ V + S ++ ++++ C D+A+
Sbjct: 298 DVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVP--SVISYTTLINGYCKIQIMDKAMG 355
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
LF+ M + P + ++N + G C GR +DAI +F +M Y PD +++ L
Sbjct: 356 LFEEMSQQGLIPDTV-----TYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRIL 410
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
D LCKN LAEA L + ++PD + Y ++MD ++ F K+ GL
Sbjct: 411 FDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGL 470
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFF 252
P++ Y ++ L Q G+L EA F
Sbjct: 471 HPDVRTYTIMINGLCQQGLLAEASKLF 497
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 10/294 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + YS L+ G G RLF + + ++ D + + +L+ +
Sbjct: 220 MLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR--KIMPDQLTFNTLVDALCKE 277
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM +A Y V S +K V NS++D C + + + +FD M + P +
Sbjct: 278 GMVVKAH--YVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVI 335
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
S+ + +GYC A+ +F +M + PDT+++N LI LC G L +A
Sbjct: 336 -----SYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIA 390
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM G PD TY +L D + +R+ + + + + L P++ +Y+ ++ +
Sbjct: 391 LFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMC 450
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G L+ A+ F + K L D +Y M+ L G L E ++ G + ++G
Sbjct: 451 RAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENG 504
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V + Y+ L+ G+ + D LFEE+ ++ G++ D V Y +L+ G
Sbjct: 325 MVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQ--GLIPDTVTYNTLIHGLCHV 382
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A+ ++E V + V + D LC N + EA+ L ++ + P
Sbjct: 383 GRLRDAIALFHEMVVYGQIPDL--VTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDP--- 437
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++++ DG C G + A ++F K+ PD ++ +I+ LC+ G+LAEA +
Sbjct: 438 --DIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASK 495
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
L+GEM + G +P+ TY L+ N F++M+ G +++ LV
Sbjct: 496 LFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLV 551
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 131/275 (47%), Gaps = 11/275 (4%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V Y+ LM G + +F+ + K G V + Y +L+ GY + ++AM
Sbjct: 297 PDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK--GCVPSVISYTTLINGYCKIQIMDKAM 354
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E + V N+++ LC+ G+ +A+ LF M P +L ++
Sbjct: 355 GLFEEM--SQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIP-----DLVTY 407
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
++ D C R +A+ + + + PD ++ ++D +C+ G L A +L+ ++S
Sbjct: 408 RILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSS 467
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV-GKLVQVGMLD 246
KG++PD TY ++++ + + + + F +M ++G PN YN + G L L
Sbjct: 468 KGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLR 527
Query: 247 EAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ F +++ + +D ++ +++ LSD G LD+
Sbjct: 528 AIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG-LDQ 561
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 31/221 (14%)
Query: 96 NNGKFDEALKLFDRMKNEHNPPKR------------------------------LAVNLG 125
N D+AL LF+RM PP + N
Sbjct: 31 NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+ N++ + +C R A V + + P T +F LI LC G + EA +L+ +M
Sbjct: 91 TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ +G PD TYG L++ +V + R M RP + VY+ ++ L + L
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQL 210
Query: 246 DEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
EA S F D++ K + ++ +Y ++ L G E + +
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRL 251
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF + ++ L+ G+ R G + L+ E+K + GV D V + + + G +
Sbjct: 528 MIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGR--GVFPDAVAFAAFINGLCIS 585
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL----CNNGKFDEALKLFDRMKNEHNP 116
G+ +A + +++ + + V NN V ++L C GK +EALKL M
Sbjct: 586 GLMTDAYDVFSDML------RKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLL 639
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P VN+ + G C QGR K AIE F M SPD +++N LID CK +
Sbjct: 640 PDIFTVNM-----IICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVG 694
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
A++L +MSD G PD TY + + V +++ +++ G+ PN YN ++
Sbjct: 695 GADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMI 754
Query: 237 GKLVQVGMLDEA 248
+ V +LD A
Sbjct: 755 NAVCNV-ILDHA 765
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 137/316 (43%), Gaps = 45/316 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + +VY+ ++ G+V+ D LFEE++ K +V DG+ + +L+ G++ G EE
Sbjct: 357 GLSQNTIVYNIMISGYVKARDISQANLLFEEMRTK--DIVPDGITFNTLVAGHYRYGKEE 414
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ + + + + S++ + +V LC G++DEA+KL + + + PP +A
Sbjct: 415 DGNRLLRD-LSVSGLLHDSSLCDVTV-AGLCWAGRYDEAMKLLENLLEKGIPPSVVA--- 469
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA------ 178
FN + Y G + A + M ++ +P + + ++L+ L + G L EA
Sbjct: 470 --FNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYD 527
Query: 179 -----------------------------EELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
E L+ EM +GV PD + ++
Sbjct: 528 MIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGL 587
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+ D F M+ G PN VYN L+G +VG L+EA M K+ L D +
Sbjct: 588 MTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNM 647
Query: 269 MMKALSDGGKLDEILE 284
++ L G++ +E
Sbjct: 648 IICGLCKQGRMKLAIE 663
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 135/327 (41%), Gaps = 25/327 (7%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
SD V +LM+ + M EA+E ++ + SA++ + L G
Sbjct: 185 SDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAIS--ILFRLLIRAGDCGAVW 242
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
KLF + + P +FN++ +C +G + + MG++RC PD S+N
Sbjct: 243 KLFGDVVRKGPCPNNF-----TFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNI 297
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+I+ C G + A L M + G P T+ ++DA + V+ YF ++ D G
Sbjct: 298 VINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMG 357
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKAL------SDGG 277
L N VYN ++ V+ + +A F+ M K + D ++ ++ DG
Sbjct: 358 LSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGN 417
Query: 278 KLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREA 337
+L L V G+L D L + L GR +E +KL+E +
Sbjct: 418 RLLRDLS-VSGLLHD------SSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAF 470
Query: 338 EAAEAAKRSA----RAAIASLIPSKFG 360
+ AA +A RA A I KFG
Sbjct: 471 NSIIAAYGNAGLEERAFYAYGIMVKFG 497
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 112/254 (44%), Gaps = 9/254 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G +P S L +R GD V++LF ++ K G + + L+ + KG
Sbjct: 217 GVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRK--GPCPNNFTFNLLILEFCRKGWTR 274
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E +G+ + + N V++A C G+ AL L + M P ++
Sbjct: 275 IG-EALLHVMGK-FRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKP-----SI 327
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + D +C +G + A + F ++ + S +T+ +N +I K +++A L+ E
Sbjct: 328 ATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEE 387
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M K + PD T+ L+ + + +DG R + SGL + ++ + V L G
Sbjct: 388 MRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGR 447
Query: 245 LDEAKSFFDIMVKK 258
DEA + +++K
Sbjct: 448 YDEAMKLLENLLEK 461
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 123/293 (41%), Gaps = 14/293 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGS--LMKGYFMKG 61
KG + ++ L+L F R G + R+ E L +G + VY ++ +KG
Sbjct: 251 KGPCPNNFTFNLLILEFCRKGWT----RIGEALLHVMGKFRCEPDVYSYNIVINANCLKG 306
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
A+ N + EN K S +++DA C G + A K FD +++ L+
Sbjct: 307 QSSYALHLLNLMI-ENGC-KPSIATFCTIIDAFCKEGNVELARKYFDEIED-----MGLS 359
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N +N+M GY A +F +M PD ++FN L+ + G + L
Sbjct: 360 QNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRL 419
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
++S G+ D + + R D+ +++ G+ P++ +N ++
Sbjct: 420 LRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGN 479
Query: 242 VGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
G+ + A + IMVK L ++ ++ +L G LDE + ++D G
Sbjct: 480 AGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKG 532
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 138/282 (48%), Gaps = 11/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VA+ VY+ L+ + GDS+ +L E++EK GV D Y +L+ Y K M
Sbjct: 198 GVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEK--GVFPDIFTYNTLISVYCKKSMHF 255
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ + E S V V NS++ G+ EA +LF ++K + N
Sbjct: 256 EALSVQDRM--ERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIKGV------VMANH 307
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DGYC +A+ + M P +++N+++ +LC++G + EA L E
Sbjct: 308 VTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS K + PD T L++A ++ + +KM++SGL+ ++ Y L+ +V
Sbjct: 368 MSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLE 427
Query: 245 LDEAK-SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
LD AK F ++ K L ++Y +++ + K DEI ++
Sbjct: 428 LDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEITKL 469
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 128/278 (46%), Gaps = 11/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ GF R+G RLF ++K G V+++ V Y +L+ GY +
Sbjct: 268 GVAPDIVTYNSLIHGFSREGRMREATRLFRKIK---GVVMANHVTYTTLIDGYCRMNDID 324
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ V E+ V NS+L LC +G+ EA +L M + P + N
Sbjct: 325 EALRL--REVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNITCN- 381
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ + YC A++V +KM E D S+ LI CK L A+E
Sbjct: 382 ----TLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELDNAKEELFS 437
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +KG++P Y L+D + N+ D+ + GL P++A+Y L+ ++ ++
Sbjct: 438 MIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRGLCPDVALYRGLIRRICKLEQ 497
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+D AK F+ M KK L D Y M A GK+ +
Sbjct: 498 VDYAKVLFESMEKKGLMGDSVIYTTMAYAYWRTGKVTD 535
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 139 RFKDAI-EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
R D + ++F+KM + + +N L+ K+G +AE+L EM +KGV PD +TY
Sbjct: 182 RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTY 241
Query: 198 GLLMDA-C-----FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
L+ C FE V D +M SG+ P++ YN L+ + G + EA
Sbjct: 242 NTLISVYCKKSMHFEALSVQD------RMERSGVAPDIVTYNSLIHGFSREGRMREATRL 295
Query: 252 FDIMVKKLKMDDASYKFM------MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
F + + + +Y + M + + +L E++E G G + ++ L+
Sbjct: 296 FRKIKGVVMANHVTYTTLIDGYCRMNDIDEALRLREVMESRG--FCPGVVTYNSILR--- 350
Query: 306 KGELSKEGREEEVVKLMEKKEREKAE 331
+L ++GR E +L+ + +K E
Sbjct: 351 --KLCEDGRIREANRLLTEMSVKKIE 374
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 109/270 (40%), Gaps = 47/270 (17%)
Query: 3 VKGFV-ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
+KG V A+ V Y+ L+ G+ R D D RL E ++ + G V Y S+++ G
Sbjct: 299 IKGVVMANHVTYTTLIDGYCRMNDIDEALRLREVMESR--GFCPGVVTYNSILRKLCEDG 356
Query: 62 MEEEAMECYNEAVGENSSVKMSA--VANNSVLDALCNNGKFDEALKLFDRMKNE------ 113
EA N + E S K+ + N++++A C A+K+ +M
Sbjct: 357 RIREA----NRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 114 -------HNPPKRLAVN-----------------LGSFNVMADGYCGQGRFKDAI----E 145
H K L ++ +++ + DG+ Q + +D I E
Sbjct: 413 YSYKALIHGFCKVLELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNK-QDEITKLPE 471
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
F K G PD + LI ++CK + A+ L+ M KG+ D Y + A +
Sbjct: 472 EFEKRG---LCPDVALYRGLIRRICKLEQVDYAKVLFESMEKKGLMGDSVIYTTMAYAYW 528
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+V D + F M + L NL +Y L
Sbjct: 529 RTGKVTDASALFDVMYNRRLMVNLKLYKSL 558
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 89/217 (41%), Gaps = 14/217 (6%)
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH--NPPKRLAVNLGS---------- 126
S K S ++ ++ L + F A +L D++ + P L +G
Sbjct: 75 SCKHSLQSSWKMILILTKHNHFKTAHQLLDKLSQRELLSSPLVLRSLVGGVSEDPEVLSH 134
Query: 127 -FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
F+ + Y G D+I VF ++ P + L++ L K + +++ +M
Sbjct: 135 VFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERLTDTVWKIFKKM 194
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
GV + + Y +L+ AC + + +M + G+ P++ YN L+ + M
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
EA S D M + + D +Y ++ S G++ E
Sbjct: 255 FEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMRE 291
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 4/171 (2%)
Query: 157 PDTLS--FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
P+ LS F+ L+ K+GM+ ++ ++ ++ G+ P +L+++ + D
Sbjct: 129 PEVLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERLTDTVW 188
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKAL 273
F+KMV G+ N+ VYN LV + G ++A+ M +K D +Y ++
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
E L + + G + G S+EGR E +L K
Sbjct: 249 CKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHG-FSREGRMREATRLFRK 298
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 148/323 (45%), Gaps = 55/323 (17%)
Query: 11 VVYSYLMLGFVRDGD---SDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
V ++ L+ F ++G ++GV + E+ GV D V Y SLM GY M
Sbjct: 186 VTFNVLVDTFCKEGKVLAAEGVLKTMTEM-----GVEPDVVTYNSLMYGYSM-------- 232
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E V EA KLFD M + P ++ S+
Sbjct: 233 --WTEVV---------------------------EARKLFDVMITKGCKP-----DVFSY 258
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+++ +GYC R +A ++F +M +P+ +S+N LI LC+ G L EA++L+ M
Sbjct: 259 SILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHT 318
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G P+ YTY +L+D + + FR M + L+PNL +YN LV + + G L +
Sbjct: 319 NGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKD 378
Query: 248 AKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI--EFSEELQEF 304
A+ F ++ V L+ + Y ++ L G LDE LE + DDG EFS +
Sbjct: 379 ARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNV--I 436
Query: 305 VKGELSKEGREEEVVKLMEKKER 327
++G L + V + E ++R
Sbjct: 437 IRGFLQHKDESRAVHLIGEMRDR 459
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 134/292 (45%), Gaps = 10/292 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V ++ L+ G + G LF+++ + G D Y +++ G G
Sbjct: 40 GLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVAR--GCQPDDYTYTTIINGLCKIGETA 97
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + + E + +++ V ++++ +LC + +EAL +F MK K ++ +
Sbjct: 98 LAAGLFKKM--EEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMK-----AKDISPTI 150
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G C R+K+A + +M P+ ++FN L+D CK G + AE +
Sbjct: 151 FTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKT 210
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M++ GV PD TY LM V + F M+ G +P++ Y+ L+ +
Sbjct: 211 MTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKR 270
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+DEAK F+ M+ + ++ SY ++ L G+L E ++ + +G +
Sbjct: 271 IDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNL 322
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D YS L+ G+ + D +LF E+ + G + V Y +L+ G
Sbjct: 246 MITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQ--GSTPNNVSYNTLIHGLCQL 303
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + + + + A +LD C G +A +LF M++ + P
Sbjct: 304 GRLREAQDLFKNMHTNGNLPNLYTYA--ILLDGFCKQGYLGKAFRLFRAMQSTYLKP--- 358
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL +N++ + C G KDA E+F ++ P+ + +I+ LCK G+L EA E
Sbjct: 359 --NLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALE 416
Query: 181 LYGEMSDKGVNPDEYTYGLLM 201
+ M D G PDE++Y +++
Sbjct: 417 AFRNMEDDGCPPDEFSYNVII 437
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 32/276 (11%)
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--------------- 117
A G ++ + V ++++ L GKF +A++LFD M P
Sbjct: 34 AKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKI 93
Query: 118 ----------KRL-----AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
K++ +N+ +++ + C R +A+++F M SP ++
Sbjct: 94 GETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTY 153
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
+LI LC EA L EM+ + P+ T+ +L+D + +V + M +
Sbjct: 154 TSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTE 213
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
G+ P++ YN L+ + EA+ FD+M+ K K D SY ++ ++DE
Sbjct: 214 MGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDE 273
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
++ ++ G + + G L + GR E
Sbjct: 274 AKQLFNEMIHQGSTPNNVSYNTLIHG-LCQLGRLRE 308
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L+ N + N++ + +C R V K + P ++F LI+ L K G A+A
Sbjct: 6 LSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAV 65
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ +M +G PD+YTY +++ ++ A F+KM ++G + N+ Y+ L+ L
Sbjct: 66 ELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSL 125
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
+ ++EA F M K + +Y +++ L + + E
Sbjct: 126 CKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKE 168
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G++P+ T +L++ ++ RVD G + K + GL+P + + L+ L +VG
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
+A FD MV + + DD +Y ++ L G+
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGE 95
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 152/325 (46%), Gaps = 13/325 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + D Y ++ F R G F ++ G+ +G+VY SL++G+ M G
Sbjct: 431 QGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAM--GLKPEGIVYHSLIQGFCMHGNL 488
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A E +E + + + V NS++++LC G+ EA +FD + + P +
Sbjct: 489 VKAKELVSEMMSRGIP-RPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERP-----D 542
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN + DGY G+ + A V M PD +S+N LID C+NG + + L+G
Sbjct: 543 VITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFG 602
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KGV P TYG+++ F R +M++SG +++ ++G L +
Sbjct: 603 EMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNN 662
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
DEA + F + +K + A M+ A+ K +E E+ I G + +
Sbjct: 663 CDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYG 722
Query: 303 EFVKGELSKEGREEE---VVKLMEK 324
+K L KEG EE + LMEK
Sbjct: 723 VMIK-NLLKEGSVEEADNMFSLMEK 746
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D V Y+ ++ + D + ++ G + V Y ++ GY +
Sbjct: 253 MMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISN--GFQPNKVTYNCMIHGYSIS 310
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +E + E + + + V NS + +LC +GK EA + FD M + + P
Sbjct: 311 GQWKETAGMFREMTSQ--GLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKP--- 365
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL +++V+ GY +G F D + +F M D FN +ID K GM+ E
Sbjct: 366 --NLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETML 423
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M ++GV PD TYG+++ A + R+ D F +M+ GL+P VY+ L+
Sbjct: 424 IFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFC 483
Query: 241 QVGMLDEAKSFFDIMVKK 258
G L +AK M+ +
Sbjct: 484 MHGNLVKAKELVSEMMSR 501
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 154/331 (46%), Gaps = 25/331 (7%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D + Y+ ++ D S L + +K GG + V Y +++ G F +G
Sbjct: 185 GVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVS 244
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A ++E + + V V S++DALC D+A + +M + P ++
Sbjct: 245 KACNLFHEMMQQ--GVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKV---- 298
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N M GY G++K+ +FR+M P+ ++ N+ + LCK+G EA E +
Sbjct: 299 -TYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDS 357
Query: 185 MSDKGVNPDEYTYGLLM-----DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
M+ KG P+ TY +L+ + CF D F M +G+ + V+N ++
Sbjct: 358 MAAKGHKPNLVTYSVLLHGYATEGCFV-----DMLNLFNSMEGNGIVADQRVFNIVIDAY 412
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKL----DEILEIVGGILDDGG 294
+ GM+DE F M ++ + DA +Y ++ A S G+L D+ +++ L G
Sbjct: 413 GKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEG 472
Query: 295 IEFSEELQEF-VKGELSKEGREEEVVKLMEK 324
I + +Q F + G L K +E V ++M +
Sbjct: 473 IVYHSLIQGFCMHGNLVKA--KELVSEMMSR 501
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 139/325 (42%), Gaps = 10/325 (3%)
Query: 7 VADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
VA P V +Y LM R F LF + G+ D +V L+K + +
Sbjct: 114 VALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKT--GLKMDVIVASILLKCLYHAKRSD 171
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ + + E V+ ++ N+V+ LC + + AL L M + + N+
Sbjct: 172 DVVNLLLHRMPE-LGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSG---GCSPNV 227
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G +G A +F +M + PD +++ ++ID LCK + +AE + +
Sbjct: 228 VTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQ 287
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G P++ TY ++ + + A FR+M GL PN+ N + L + G
Sbjct: 288 MISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGK 347
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
EA FFD M K K + +Y ++ + G ++L + ++ GI + +
Sbjct: 348 SKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNS-MEGNGIVADQRVFN 406
Query: 304 FVKGELSKEGREEEVVKLMEKKERE 328
V K G +E + + + + +
Sbjct: 407 IVIDAYGKRGMMDETMLIFTQMQEQ 431
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 120/267 (44%), Gaps = 33/267 (12%)
Query: 46 DGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK 105
D + + SL+ GY + G E+A + + ++ ++ V+ N+++D C NG+ D+ L
Sbjct: 542 DVITFNSLIDGYGLVGKIEKAFGVLDAMI--SAGIEPDVVSYNTLIDGYCRNGRIDDGLI 599
Query: 106 LFDRMKNEHNPPKRLAVNL---GSFN---------------------------VMADGYC 135
LF M ++ P + + G FN ++ G C
Sbjct: 600 LFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLC 659
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+AI +F+K+G + N +ID + K EA+EL+ +S G+ P+
Sbjct: 660 RNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNAS 719
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF-FDI 254
TYG+++ + V++ F M SG P+ + N ++ L++ G + +A ++ F +
Sbjct: 720 TYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKV 779
Query: 255 MVKKLKMDDASYKFMMKALSDGGKLDE 281
K++ ++ ++ +M S GK E
Sbjct: 780 DGKRISLEASTVSLLMALFSREGKYWE 806
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 12/168 (7%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMA----DGYCGQGRFKDAIEVFRKM----GE 152
++A LFD + + P ++N G F +A C G A+ +F ++
Sbjct: 54 EDAHHLFDELLRQTIPVPERSLN-GFFTALARAPSSAACRDGP-SLAVALFNRICREEAR 111
Query: 153 YRCS-PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
R + P ++N L+D C+ L+G G+ D +L+ + R D
Sbjct: 112 PRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSD 171
Query: 212 DGAT-YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
D +M + G+ P+ YN +V L + A MVKK
Sbjct: 172 DVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKK 219
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 22/292 (7%)
Query: 2 FVKGFVADP----VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
FV+ +P Y+ L+LG+ R+ D + +F + + + V Y +L+ G
Sbjct: 212 FVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR------NAVSYTNLIHGL 265
Query: 58 FMKGMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
G EA+E + G +V+ V ++ ALC +G+ EAL LF M+
Sbjct: 266 CEAGKLHEALEFWARMREDGCFPTVRTYTV----LVCALCESGRELEALSLFGEMRERGC 321
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P N+ ++ V+ D C +GR +A+++ +M E +P + FN LI CK GM+
Sbjct: 322 EP-----NVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMM 376
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+A + G M K V P+ TY L+ +D KMV+S L P++ YN L
Sbjct: 377 EDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTL 436
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+ L +VG++D A F +M++ D ++ M L G++ E +I+
Sbjct: 437 IHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQIL 488
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 139/311 (44%), Gaps = 22/311 (7%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ L+ GF R D L ++ E + D V Y +L+ G G+ + A +
Sbjct: 397 TYNELICGFCRGKSMDRAMALLNKMVE--SKLSPDVVTYNTLIHGLCEVGVVDSASRLFR 454
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+ + S N+ + LC G+ EA ++ + +K +H + N ++ +
Sbjct: 455 LMIRDGFSPDQWTF--NAFMVCLCRMGRVGEAHQILESLKEKH-----VKANEHAYTALI 507
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
DGYC G+ + A +F++M C P++++FN +ID L K G + +A L +M+ V
Sbjct: 508 DGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVK 567
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P +TY +L++ + D +++ SG +PN+ Y + G L+EA+
Sbjct: 568 PTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEE- 626
Query: 252 FDIMVKKLK-----MDDASYKFMMKALSDGGKLDEILEIVGGILDDGG----IEFSEELQ 302
MV K+K +D Y ++ A G LD ++ + G + +S ++
Sbjct: 627 ---MVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMK 683
Query: 303 EFVKGELSKEG 313
V + KEG
Sbjct: 684 HLVIEKHKKEG 694
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 127/274 (46%), Gaps = 34/274 (12%)
Query: 50 YGSLMKGYFMKGMEEEAMECYNEAVGEN-SSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
Y L+ M +E + Y E + +N +SV + + N++L++ C G A F
Sbjct: 154 YNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFV 213
Query: 109 R-MKNEHNP----------------------------PKRLAVNLGSFNVMADGYCGQGR 139
R ++ E P P+R AV S+ + G C G+
Sbjct: 214 RILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAV---SYTNLIHGLCEAGK 270
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+A+E + +M E C P ++ L+ LC++G EA L+GEM ++G P+ YTY +
Sbjct: 271 LHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTV 330
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKK 258
L+D + R+D+ +MV+ G+ P++ +N L+G + GM+++A +M KK
Sbjct: 331 LIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKK 390
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
+ + +Y ++ G +D + ++ +++
Sbjct: 391 VCPNVRTYNELICGFCRGKSMDRAMALLNKMVES 424
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 9/240 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GF D ++ M+ R G ++ E LKEK V ++ Y +L+ GY
Sbjct: 456 MIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEK--HVKANEHAYTALIDGYCKA 513
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A + + E +++ N ++D L GK +A+ L + M P
Sbjct: 514 GKIEHAASLFKRMLAEECLP--NSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKP--- 568
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
L ++N++ + + F A E+ ++ P+ +++ I C G L EAEE
Sbjct: 569 --TLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEE 626
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ ++ ++GV D + Y LL++A + +D R+M +G P+ Y+ L+ LV
Sbjct: 627 MVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLV 686
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 133/309 (43%), Gaps = 33/309 (10%)
Query: 33 FEELKEKLGGVVSDG-----VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
F+ E L ++S G V Y + +K Y +G EEA E + +N V + +
Sbjct: 586 FDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKI--KNEGVLLDSFIY 643
Query: 88 NSVLDALCNNGKFDEALKLFDRM------------------------KNEHNPPKRLAVN 123
N +++A G D A + RM K E + P L V+
Sbjct: 644 NLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVS 703
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L + +V + F +F KM E C P+ +++ LI+ LCK G L A LY
Sbjct: 704 LTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYH 763
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + G++P E + L+ +C ++ + T M++ +L Y L+ L +
Sbjct: 764 HMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQM 823
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++A++ F +++ D+ ++K ++ L+ G +D+ E++ +++ G E
Sbjct: 824 NKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELL-NLMEKNGCRLHPETY 882
Query: 303 EFVKGELSK 311
+ EL++
Sbjct: 883 SMLMQELNR 891
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 37/211 (17%)
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRF 140
K+S + N +L L DE + L+ M ++ + NL + N M + YC G
Sbjct: 148 KLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNG--NSVFPNLITLNTMLNSYCKLGNM 205
Query: 141 KDAIEVFRKMGEYRCSP---------------------------------DTLSFNNLID 167
A F ++ RC P + +S+ NLI
Sbjct: 206 AVARLFFVRI--LRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIH 263
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
LC+ G L EA E + M + G P TY +L+ A E R + + F +M + G P
Sbjct: 264 GLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEP 323
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
N+ Y L+ L + G +DEA + MV+K
Sbjct: 324 NVYTYTVLIDYLCKEGRMDEALKMLNEMVEK 354
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 154/349 (44%), Gaps = 42/349 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK--------------------- 39
M V GF+ D YS L G +R D +G L+E+ EK
Sbjct: 307 MEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGK 366
Query: 40 ------------LGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
G+V+D V+Y + + GY G +A+ E+ ++ +++
Sbjct: 367 VEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERM--ESFGLRPNSITF 424
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
NS++D C+ + D+A + +M + P ++ ++N + DGY F ++
Sbjct: 425 NSLIDKFCDMKEMDKAEEWVKKMAEKGVTP-----SVETYNTLIDGYGKLCTFDRCFQIL 479
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M E P+ +S+ +LI+ LCK+G + EAE + +M +GV P+ Y +L+D V
Sbjct: 480 EQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMV 539
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASY 266
+V D +F +M+ S + P L YN L+ L + G L EA+ F I D +Y
Sbjct: 540 GKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITY 599
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
++ ++ G + + L + + + G + G SKEG E
Sbjct: 600 NSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIE 647
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 141/322 (43%), Gaps = 40/322 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY------- 57
G VAD V+Y+ + G+ R GD + E ++ G+ + + + SL+ +
Sbjct: 381 GLVADEVIYNTFVNGYCRIGDMNKAILTIERMES--FGLRPNSITFNSLIDKFCDMKEMD 438
Query: 58 ----FMKGMEEE----AMECYNEAVG------------------ENSSVKMSAVANNSVL 91
++K M E+ ++E YN + E VK + V+ S++
Sbjct: 439 KAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLI 498
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ LC +GK EA + M P N +N++ DG C G+ KDA+ F +M
Sbjct: 499 NCLCKDGKILEAEIVLRDMICRGVLP-----NAQVYNMLIDGSCMVGKVKDALRFFDEMM 553
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
SP +++N LID LCK G L EAE+ +++ G +PD TY L+ V
Sbjct: 554 RSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVS 613
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMK 271
+ M + G++P + Y+ L+ + G+ K + +++ L D Y M+
Sbjct: 614 KCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIH 673
Query: 272 ALSDGGKLDEILEIVGGILDDG 293
++ G + + G+LD G
Sbjct: 674 CYAEIGNTQKAYSLHQGMLDQG 695
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 148/361 (40%), Gaps = 84/361 (23%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
V V Y+ L+ G+ + G+ D F++ E +KEK V + + + SL+ G +E
Sbjct: 242 LVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEK--SVAPNIITFNSLLSGLCKMRKMKE 299
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDAL--CNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A E E + + + D L C++G + A++L+ E K + +N
Sbjct: 300 ARSLLKEM--EVNGFMPDGYTYSILFDGLLRCDDG--NGAMELY-----EQATEKGIRIN 350
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGE------------------------------- 152
+ +++ +G C QG+ + A E+ +K E
Sbjct: 351 NYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIE 410
Query: 153 ----YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA----- 203
+ P++++FN+LID+ C + +AEE +M++KGV P TY L+D
Sbjct: 411 RMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLC 470
Query: 204 ----CFEV-----------NRVDDGA---------------TYFRKMVDSGLRPNLAVYN 233
CF++ N V G+ R M+ G+ PN VYN
Sbjct: 471 TFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYN 530
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
L+ VG + +A FFD M++ ++ +Y ++ L GKL E + + I
Sbjct: 531 MLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSS 590
Query: 293 G 293
G
Sbjct: 591 G 591
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 117/254 (46%), Gaps = 18/254 (7%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
V+ + N ++ LC + +A K+FD M N + L ++ ++N + DGYC G
Sbjct: 207 VRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNIN-----LVGSIVTYNTLIDGYCKVGE 261
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
A ++ +M E +P+ ++FN+L+ LCK + EA L EM G PD YTY +
Sbjct: 262 LDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSI 321
Query: 200 LMDACFEVNRVDDG---ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
L D R DDG + + + G+R N + L+ L + G +++A+
Sbjct: 322 LFDGLL---RCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFT 378
Query: 257 KK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI----LDDGGIEFSEELQEFVKGELSK 311
+ L D+ Y + G +++ + + + L I F+ + +F ++ +
Sbjct: 379 ENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFC--DMKE 436
Query: 312 EGREEEVVKLMEKK 325
+ EE VK M +K
Sbjct: 437 MDKAEEWVKKMAEK 450
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 109/278 (39%), Gaps = 33/278 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + VY+ L+ G G R F+E+ + V Y L+ G K
Sbjct: 517 MICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMR--SEISPTLVTYNVLIDGLCKK 574
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
G EA + + S + NS++ N G + L L++ MKN P
Sbjct: 575 GKLTEAEDFLTQITSSGHSP--DVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVR 632
Query: 118 ----------------------KRLAVNLGS----FNVMADGYCGQGRFKDAIEVFRKMG 151
+ L +NL +N M Y G + A + + M
Sbjct: 633 TYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGML 692
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ PD +++N+LI + G L+ ++L M K + P TY +L+ ++
Sbjct: 693 DQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFS 752
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
++R+MV++ PN ++ N L L Q G L E +
Sbjct: 753 GAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQ 790
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 8/189 (4%)
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
K +E M + P+ +N LI LC+ + +AE+++ EM + + TY
Sbjct: 192 LKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNT 251
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKK 258
L+D +V +D +M + + PN+ +N L+ L ++ + EA+S M V
Sbjct: 252 LIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNG 311
Query: 259 LKMDDASYKFMMKAL---SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
D +Y + L DG E+ E + GI + + L K+G+
Sbjct: 312 FMPDGYTYSILFDGLLRCDDGNGAMELYEQA----TEKGIRINNYTGSILLNGLCKQGKV 367
Query: 316 EEVVKLMEK 324
E+ ++++K
Sbjct: 368 EKAEEILKK 376
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L+ E+ + G D + Y + A ++ + G + M G+RPN+ +YN L+G L
Sbjct: 162 DLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGL 221
Query: 240 VQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLD 280
+ + +A+ FD M L +Y ++ G+LD
Sbjct: 222 CREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELD 263
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 12/190 (6%)
Query: 3 VKGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+K P V +Y L+ G ++G + V +L+ E+ + ++ D VVY +++ Y
Sbjct: 622 MKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQM--NLLPDRVVYNAMIHCYAEI 678
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A + + + + + NS++ GK L + MK K L
Sbjct: 679 GNTQKAYSLHQGMLDQ--GIHPDKMTYNSLILGHFREGKLSNIKDLVNNMK-----AKEL 731
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A +++++ G+C F A +R+M E P+ N L L + G L E +
Sbjct: 732 APKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQV 791
Query: 181 LYGEMSDKGV 190
+ EM+ KG+
Sbjct: 792 ICSEMNVKGI 801
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQG 138
S+ + ++ +L C + EA++L++ M+ + P ++++L ++ +
Sbjct: 101 SIPLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLV-----NEK 155
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+F +++F ++ DT + I K L E M +GV P+ + Y
Sbjct: 156 QFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYN 215
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+L+ R+ D F +M + L ++ YN L+ +VG LD A
Sbjct: 216 VLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAA 265
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 11/296 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + V Y+ ++ +G + +L E+++E G+ D V + +
Sbjct: 214 MRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREV--GLSPDIVTFNCRIAALCKS 271
Query: 61 GMEEEAMECYNE-AVGENSSV-KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G EA + + + E + K + V N +L+ C+ G F+EA +FD MKN
Sbjct: 272 GQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSE---- 327
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++L S+N+ G G+ +A + +M E P+ S+N L+ LCK GM ++A
Sbjct: 328 --TLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDA 385
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ G M + GV PD TY L+ ++ + R+M+ G PN+ N L+
Sbjct: 386 RSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHS 445
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L + G EA+ +M ++ +D+ + M+ L G LD+ +EIV G+ G
Sbjct: 446 LWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRG 501
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 9/206 (4%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
VK N ++ ALC G + A ++FD+M + P S ++ GYC G
Sbjct: 149 VKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEF-----SLGILVRGYCRAGL 203
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
I++ +M P+ +++N +I LC G EAE+L +M + G++PD T+
Sbjct: 204 HSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNC 263
Query: 200 LMDACFEVNRVDDGATYFRKM-VDS--GL-RPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+ A + ++ + + FR M +D GL +PN YN ++ GM +EA++ FD M
Sbjct: 264 RIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM 323
Query: 256 VKKLKMDDASYKFMMKALSDGGKLDE 281
+ SY M L GKL E
Sbjct: 324 KNSETLSLRSYNIWMLGLVRSGKLLE 349
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
++ +++ LC G+ DEA K M + P L F+ YC QG+ A
Sbjct: 529 SITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLI-----FDTFIYNYCKQGKLSSA 583
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
V ++M + C+ ++N+LI L + E L EM ++G+ P+ YTY ++
Sbjct: 584 FRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISC 643
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD 263
E ++ D +M+ G+ PN+ + L+G + A+ F+I + +
Sbjct: 644 LSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKE 703
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILD 291
+ Y FM L GG+ + E+ LD
Sbjct: 704 SLYSFMFNELLAGGETLKAKELFEAALD 731
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 8/196 (4%)
Query: 89 SVLDALCNNGKFDEALKLFDRMKNE--HNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
S++ L + G + A+ F +++ H+PP + +N++ + R I +
Sbjct: 86 SLVRTLADLGLLENAISQFRSLRDRFPHDPPP-----ISFYNLLFRCSLKESRVDCVIWL 140
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
++ M R P T +FN LI LC+ G L A E++ +MS+KG P+E++ G+L+
Sbjct: 141 YKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCR 200
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDAS 265
G +M SG PN YN ++ L G EA+ + M + L D +
Sbjct: 201 AGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVT 260
Query: 266 YKFMMKALSDGGKLDE 281
+ + AL G++ E
Sbjct: 261 FNCRIAALCKSGQILE 276
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 111/258 (43%), Gaps = 14/258 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K D +++ + + + G FR+ +E+++K G Y SL++G
Sbjct: 555 MIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKK--GCNKSLRTYNSLIQGL--- 609
Query: 61 GMEEEAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G E + E Y + + E + + N+++ L GK +A L D M K
Sbjct: 610 GSENQIFEIYGLMDEMKERG-IFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQ-----K 663
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ N+ +F ++ + F A E+F ++ C ++ + ++L G +A
Sbjct: 664 GISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHKESLYSFMFNELLAGGETLKA 722
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+EL+ D+ + + Y L++ + ++DD + KM+D + A + ++ +
Sbjct: 723 KELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDE 782
Query: 239 LVQVGMLDEAKSFFDIMV 256
L + G A F + M+
Sbjct: 783 LGKRGSKHAADEFAERMM 800
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 135/279 (48%), Gaps = 8/279 (2%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
V D + Y+ ++ D S + + + ++ G D V + +++ G+F +G +A
Sbjct: 192 VPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKA 251
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+NE V + V NS++DALC D+A + +M ++ P + +
Sbjct: 252 CNLFNEMVQKG--VVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGV-----T 304
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + GY G +K++ ++FRKM PDT++F++ + LCK+G +AEE++ M+
Sbjct: 305 YNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMT 364
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
KG PD +Y +L+ R D F M D G+ N N L+ + GM+D
Sbjct: 365 TKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMD 424
Query: 247 EAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILE 284
EA F M + ++ + +Y ++ A G+L + +E
Sbjct: 425 EAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAME 463
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 124/258 (48%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V D Y+ ++ + D + ++ +K GV DGV Y +++ GY
Sbjct: 258 MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDK--GVEPDGVTYNAIIHGYSCS 315
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +E+ + + + + + V +S + +LC +G+ +A ++F M + + P
Sbjct: 316 GHWKESAKMFRKMTSKG--LIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMP--- 370
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S++++ GY +GRF D +F M + + N LI K GM+ EA
Sbjct: 371 --DIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAML 428
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM +GV P+ TY L+ A + R+ D F +M+ G+ PN AVY+ L+
Sbjct: 429 VFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFC 488
Query: 241 QVGMLDEAKSFFDIMVKK 258
G L +AK F M+ K
Sbjct: 489 MHGDLVKAKEFISEMMSK 506
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 149/338 (44%), Gaps = 20/338 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-----VYGSLMKGYF 58
+G + V YS L+ F R G RL + + EK ++S G+ VY SL+ G+
Sbjct: 436 QGVRPNVVTYSTLISAFCRMG------RLADAM-EKFSQMISIGIEPNTAVYHSLIHGFC 488
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
M G +A E +E + + + + V +S++ +LC G+ +A +F+ + + + P
Sbjct: 489 MHGDLVKAKEFISEMMSKGLH-RPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRP- 546
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ +FN + DGYC G+ + A V M PD ++ N L+ CK+G + +
Sbjct: 547 ----TIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDG 602
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
L+ EM K V P TY +++D R F +M+DSG ++ Y L+
Sbjct: 603 LILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKG 662
Query: 239 LVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
L + + DEA + F + K D M+ AL + +E ++ I G +
Sbjct: 663 LCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPN 722
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
++ L KEG EE + E+ +R
Sbjct: 723 VSTYGVMIR-NLLKEGSVEEADTMFSSMEKSGCAPSSR 759
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 128/277 (46%), Gaps = 10/277 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ L+ G+ G + F + + + G+ D V +L+ GY G ++ + +
Sbjct: 549 VTFNSLIDGYCLVGKMEKAFGVLDAMVSV--GIEPDVVTNNTLVSGYCKSGKIDDGLILF 606
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E + + VK + V N VLD L G+ A K+F M + AV++ ++ ++
Sbjct: 607 REML--HKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGT-----AVDIDTYKIL 659
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C +AI +F K+G C D N +I+ L K EA +L+ +S G+
Sbjct: 660 LKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGL 719
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ TYG+++ + V++ T F M SG P+ + N ++ L+Q G + +A
Sbjct: 720 VPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGY 779
Query: 251 FFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+ + + ++ ++ +M S GK E ++ +
Sbjct: 780 YMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKFL 816
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 135 CGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG--VN 191
C R +A++V +M E C PD +S+N +I LC + EA ++ M+ +G +
Sbjct: 170 CHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCS 229
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
PD ++ ++ F+ V F +MV G+ P++ YN +V L + +D+A+
Sbjct: 230 PDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFV 289
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELS 310
MV K ++ D +Y ++ S G E ++ + G I + F+ L
Sbjct: 290 LRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFM-SSLC 348
Query: 311 KEGRE---EEVVKLMEKK 325
K GR EE+ + M K
Sbjct: 349 KHGRSKDAEEIFQYMTTK 366
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 27/172 (15%)
Query: 156 SPDTLSFNNLIDQLCKNG---MLAEAEELYGEMSDKGVNP-DEYTYGLLMDACFEVNRVD 211
+PD++S C NG +LA + E + V P TYG+LMD C R D
Sbjct: 90 APDSVS--------CSNGPALVLALFNRICREEAGPRVAPLTVRTYGILMDCCCRARRPD 141
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASY 266
G + +++ +GL+ + L DEA D+++ ++ D SY
Sbjct: 142 LGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEA---VDVLLHRMSELSCVPDAISY 198
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGG------IEFSEELQEFVK-GELSK 311
++K+L + E L++V + +GG + F+ + F K GE+SK
Sbjct: 199 NTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSK 250
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 10/273 (3%)
Query: 10 PVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMEC 69
P +S L+ + + G ++ F ++K+ G D Y S++ K + A+
Sbjct: 131 PPTFSVLIAAYAKSGMAEKAVESFGKMKD--FGCKPDVFTYNSILHVMVQKEVFLLALAV 188
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
YN+ + N + + +L+ LC NGK D+ALK+FD M + PP N + +
Sbjct: 189 YNQMLKLNYNPNRATFV--ILLNGLCKNGKTDDALKMFDEMTQKGIPP-----NTMIYTI 241
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ G C R D + M C PD+++ N L+D CK G + EA L +G
Sbjct: 242 ILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEG 301
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
Y L+D F R D+ + RKM +G+ P++ +Y L+ +VGM+D A
Sbjct: 302 YVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYAL 361
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ + M ++ L D Y ++K D G LD+
Sbjct: 362 NMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDK 394
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 9/252 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + ++Y+ ++ G + +D V RL +K + G D + +L+ G+
Sbjct: 227 MTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMK--VSGCCPDSITCNALLDGFCKL 284
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA + E + +S++D L ++DE + +M P
Sbjct: 285 GQIDEAFALLQ--LFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEP--- 339
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + ++ G+C G A+ + M + SPDT +N LI C G+L +A
Sbjct: 340 --DVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARS 397
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L E+S P TY +L+ +D+ F +M + G P++ +N L+ L
Sbjct: 398 LQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLC 457
Query: 241 QVGMLDEAKSFF 252
+ G L+EA+ F
Sbjct: 458 KAGELEEARHLF 469
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 117/256 (45%), Gaps = 27/256 (10%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNE--HNPPKRLAVNLGSFNVMADGYCGQGRF 140
S V +N V+D L + FD K+ + +KN PP +F+V+ Y G
Sbjct: 95 SWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPP-------TFSVLIAAYAKSGMA 147
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
+ A+E F KM ++ C PD ++N+++ + + + A +Y +M NP+ T+ +L
Sbjct: 148 EKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVIL 207
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKL 259
++ + + DD F +M G+ PN +Y ++ L Q D+ + M V
Sbjct: 208 LNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGC 267
Query: 260 KMDDASYKFMMKALSDGGKLDE---ILEI------VGGI-----LDDGGIEFS--EELQE 303
D + ++ G++DE +L++ V GI L DG +E+QE
Sbjct: 268 CPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQE 327
Query: 304 FVKGELSKEGREEEVV 319
+ + ++ K G E +VV
Sbjct: 328 WCR-KMFKAGIEPDVV 342
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 143/335 (42%), Gaps = 51/335 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF-- 58
MF G D V+Y+ L+ GF G D + ++ ++ G+ D Y +L+KG+
Sbjct: 332 MFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQR--GLSPDTYCYNALIKGFCDV 389
Query: 59 ---------------------------------MKGMEEEAMECYNEAVGENSSVKMSAV 85
G+ +EA + +N+ EN S +
Sbjct: 390 GLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQM--ENLGCSPSIM 447
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM--ADGYCGQGRFKDA 143
N+++D LC G+ +EA LF +M+ NP L ++ G+ VM A+G+ R +DA
Sbjct: 448 TFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDA 507
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
V +M + C+P + + L+ C+ G L+ A L+ + + ++ T L +
Sbjct: 508 FRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEH 567
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPN---LAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK 260
FE ++ R +++ + N +A Y + L Q +EA F +++K+ +
Sbjct: 568 -FEKGELEKAV---RCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIF-LVLKECQ 622
Query: 261 MD--DASYKFMMKALSDGGKLDEILEIVGGILDDG 293
MD S ++ L G L+ ++I L+ G
Sbjct: 623 MDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKG 657
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 134/279 (48%), Gaps = 12/279 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V++Y L+ GF++ + R+ + +K + G + D V Y ++ + +G + A+
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSR--GFLPDVVTYNIMIGSFCSRGKLDLAL 193
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E + E + +N + + + +++A +G D A+KL D M ++ P L ++
Sbjct: 194 EIFEELLKDNC--EPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTL-----TY 246
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + G C + A E+ R + C PD +++N L+ L G +E E+L EM
Sbjct: 247 NAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMIS 306
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G P+ T+ +L+ +V++ R M + GL+P+ Y+ L+ + G LD
Sbjct: 307 IGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDL 366
Query: 248 AKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI 285
A F + M+ + D +Y +M L GK D+ LE+
Sbjct: 367 ATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEV 405
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 152/327 (46%), Gaps = 25/327 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEE-LKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+GF+ D V Y+ ++ F G D +FEE LK+ V + Y L++ + G
Sbjct: 167 RGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTV---ITYTILIEATILDGG 223
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+ AM+ +E + + ++ + N+++ +C D+A +L + + P
Sbjct: 224 IDVAMKLLDEMLSK--GLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKP----- 276
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ ++N++ +G++ + ++ +M C P+ ++ + LI LC++G + EA L
Sbjct: 277 DIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLL 336
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M +KG+ PD Y Y L+ R+D + M+ G P++ YN ++ L +
Sbjct: 337 RSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRT 396
Query: 243 GMLDEAKSFFDIMVKKLKMDD-------ASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
G D+A F+ K+D+ +SY + AL G LE++ +L+ GI
Sbjct: 397 GKADQALEVFE------KLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQ-GI 449
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLM 322
+ E + L ++G +E ++L+
Sbjct: 450 DPDEITYNSLISCLCRDGMVDEAIELL 476
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 137/320 (42%), Gaps = 35/320 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D + Y+ ++ G ++ D F L L + G D + Y L++ +
Sbjct: 234 MLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSR--GCKPDIITYNILLRTLLSR 291
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-- 118
G E + +E + + K + V ++ ++ LC +GK +EA+ L MK + P
Sbjct: 292 GKWSEGEKLISEMI--SIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAY 349
Query: 119 -------------RLAV---------------NLGSFNVMADGYCGQGRFKDAIEVFRKM 150
RL + ++ ++N + G C G+ A+EVF K+
Sbjct: 350 CYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKL 409
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E C P+ S+N L L +G A E+ ++ ++G++PDE TY L+ V
Sbjct: 410 DEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMV 469
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
D+ M RPN+ YN ++ L +V ++A M +K + ++ +Y +
Sbjct: 470 DEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILL 529
Query: 270 MKALSDGGKLDEILEIVGGI 289
++ + G E +E+ +
Sbjct: 530 IEGIGFSGLRAEAMELANSL 549
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 139/322 (43%), Gaps = 51/322 (15%)
Query: 42 GVVSDGVVYGSLMKGYFMK---GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNG 98
G D ++ L+KG+F G ME E G K A N+++
Sbjct: 99 GYTPDVILCTKLIKGFFNSRNIGKATRVMEIL-ERYG-----KPDVFAYNALISGFIKAN 152
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC--- 155
+ + A ++ DRMK+ P ++ ++N+M +C +G+ A+E+F ++ + C
Sbjct: 153 QLENANRVLDRMKSRGFLP-----DVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPT 207
Query: 156 --------------------------------SPDTLSFNNLIDQLCKNGMLAEAEELYG 183
PDTL++N +I +CK M+ +A EL
Sbjct: 208 VITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLR 267
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+S +G PD TY +L+ + +G +M+ G +PN+ ++ L+G L + G
Sbjct: 268 SLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDG 327
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++EA + M +K LK D Y ++ G+LD E + ++ DG +
Sbjct: 328 KVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYN 387
Query: 303 EFVKGELSKEGREEEVVKLMEK 324
+ G L + G+ ++ +++ EK
Sbjct: 388 TIMAG-LCRTGKADQALEVFEK 408
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNE-HNPPKRLAVNL--GSFNVMADGYCGQGRFKDAIEV 146
+L+ C GK++E+L + M ++ + P L L G FN G+ +E+
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSR-----NIGKATRVMEI 129
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
+ G+ PD ++N LI K L A + M +G PD TY +++ +
Sbjct: 130 LERYGK----PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCS 185
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDAS 265
++D F +++ P + Y L+ + G +D A D M+ K L+ D +
Sbjct: 186 RGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLT 245
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDG 293
Y +++ + +D+ E++ + G
Sbjct: 246 YNAIIRGMCKEMMVDKAFELLRSLSSRG 273
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 129/277 (46%), Gaps = 13/277 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFM 59
M G D YS L+ G + +D + + L+ G G D VVY S++ +
Sbjct: 188 MKASGVTPDAFTYSALIHGLCK---ADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 244
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G EA + E + S + V N+V+D LC GK EA + D+M+ +
Sbjct: 245 SGKLLEAQKTLQEMRKQRKSPDV--VTYNTVIDGLCKLGKIAEAQVILDQMQESGD---- 298
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ ++ +++ + +G C +A ++ +M + C+PD +++ +ID LCK G L EAE
Sbjct: 299 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 358
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L M G P+ TY L+ + +VD+ +M ++G PNL YN +V L
Sbjct: 359 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 418
Query: 240 VQVGMLDEAKSFFDIM---VKKLKMDDASYKFMMKAL 273
G + EA+ M + D A+Y+ ++ AL
Sbjct: 419 CVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 455
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 131/292 (44%), Gaps = 13/292 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D ++ ++ GD DG + G + V Y +L+ + E
Sbjct: 20 GFAPDAFTHTPIITAMANAGDLDGAMDHLRSM-----GCDPNVVTYTALIAAFARAKKLE 74
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EAM+ E + V N ++DALC A + +M P N+
Sbjct: 75 EAMKLLEEM--RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAP-----NV 127
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN + DG+C +G DA ++ M P+ ++++ LID LCK+ EA+E+ E
Sbjct: 128 MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 187
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M GV PD +TY L+ + +++++ R+M SG P++ VY+ ++ + G
Sbjct: 188 MKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 247
Query: 245 LDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
L EA+ M K+ K D +Y ++ L GK+ E I+ + + G +
Sbjct: 248 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 9/193 (4%)
Query: 95 CNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
CN G AL+L + MK+ P + MA+ G A++ R MG
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFT-HTPIITAMANA----GDLDGAMDHLRSMG--- 52
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C P+ +++ LI + L EA +L EM ++G P+ TY +L+DA +++ V
Sbjct: 53 CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQ 112
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
+KM++ G PN+ +N LV + G +D+A+ IMV K ++ + +Y ++ L
Sbjct: 113 DVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 172
Query: 274 SDGGKLDEILEIV 286
K E E++
Sbjct: 173 CKSQKFLEAKEVL 185
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+ D V YS ++ G + +L + + + G D V Y +++ G G EE
Sbjct: 299 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK--AGCNPDVVTYTTIIDGLCKCGRLEE 356
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A Y + + + V +++ LC K DEA ++ + M+N PP NL
Sbjct: 357 AE--YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP-----NLV 409
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N M +G C GR K+A ++ ++M G CSPD ++ +++ L + ++ EAE+L
Sbjct: 410 TYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLE 469
Query: 184 EM 185
+M
Sbjct: 470 QM 471
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 11/296 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + V Y+ ++ +G + +L E+++E G+ D V + +
Sbjct: 214 MRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREV--GLSPDIVTFNCRIAALCKS 271
Query: 61 GMEEEAMECYNE-AVGENSSV-KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G EA + + + E + K + V N +L+ C+ G F+EA +FD MKN
Sbjct: 272 GQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSE---- 327
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++L S+N+ G G+ +A + +M E P+ S+N L+ LCK GM ++A
Sbjct: 328 --TLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDA 385
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ G M + GV PD TY L+ ++ + R+M+ G PN+ N L+
Sbjct: 386 RSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHS 445
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L + G EA+ +M ++ +D+ + M+ L G LD+ +EIV G+ G
Sbjct: 446 LWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRG 501
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 9/208 (4%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
+ VK N ++ ALC G + A ++FD+M + P S ++ GYC
Sbjct: 147 AKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEF-----SLGILVRGYCRA 201
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G I++ +M P+ +++N +I LC G EAE+L +M + G++PD T+
Sbjct: 202 GLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTF 261
Query: 198 GLLMDACFEVNRVDDGATYFRKM-VDS--GL-RPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
+ A + ++ + + FR M +D GL +PN YN ++ GM +EA++ FD
Sbjct: 262 NCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFD 321
Query: 254 IMVKKLKMDDASYKFMMKALSDGGKLDE 281
M + SY M L GKL E
Sbjct: 322 SMKNSETLSLRSYNIWMLGLVRSGKLLE 349
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
++ +++ LC G+ DEA K M + P L F+ YC QG+ A
Sbjct: 529 SITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLI-----FDTFIYNYCKQGKLSSA 583
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
V ++M + C+ ++N+LI L + E L EM ++G+ P+ YTY ++
Sbjct: 584 FRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISC 643
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD 263
E ++ D +M+ G+ PN+ + L+G + A+ F+I + +
Sbjct: 644 LSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKE 703
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILD 291
+ Y FM L GG+ + E+ LD
Sbjct: 704 SLYSFMFNELLAGGETLKAKELFEAALD 731
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 8/196 (4%)
Query: 89 SVLDALCNNGKFDEALKLFDRMKNE--HNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
S++ L + G + A+ F +++ H+PP + +N++ + R I +
Sbjct: 86 SLVRTLADLGLLENAISQFRSLRDRFPHDPPP-----ISFYNLLFRCSLKESRVDCVIWL 140
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
++ M + P T +FN LI LC+ G L A E++ +MS+KG P+E++ G+L+
Sbjct: 141 YKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCR 200
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDAS 265
G +M SG PN YN ++ L G EA+ + M + L D +
Sbjct: 201 AGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVT 260
Query: 266 YKFMMKALSDGGKLDE 281
+ + AL G++ E
Sbjct: 261 FNCRIAALCKSGQILE 276
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 111/258 (43%), Gaps = 14/258 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K D +++ + + + G FR+ +E+++K G Y SL++G
Sbjct: 555 MIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKK--GCNKSLRTYNSLIQGL--- 609
Query: 61 GMEEEAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G E + E Y + + E + + N+++ L GK +A L D M K
Sbjct: 610 GSENQIFEIYGLMDEMKERG-IFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQ-----K 663
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ N+ +F ++ + F A E+F ++ C ++ + ++L G +A
Sbjct: 664 GISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHKESLYSFMFNELLAGGETLKA 722
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+EL+ D+ + + Y L++ + ++DD + KM+D + A + ++ +
Sbjct: 723 KELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDE 782
Query: 239 LVQVGMLDEAKSFFDIMV 256
L + G A F + M+
Sbjct: 783 LGKRGSKHAADEFAERMM 800
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 163/395 (41%), Gaps = 89/395 (22%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y L+ G D D L E+ E G+ + VVY L+ GY G E
Sbjct: 124 GVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCE--SGIEPNVVVYSCLLHGYCKTGRWE 181
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ + E G ++ V +++D+LC +GK +A ++ D M P N+
Sbjct: 182 SVGKVFEEMSGRG--IEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEP-----NV 234
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKM---------------------------------- 150
++NV+ + C +G ++A+++ + M
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294
Query: 151 ---GEYRCSPDTLSFNNLIDQLCKNG----------MLAE-------------------- 177
GE R PD ++FN++I LCK G M+AE
Sbjct: 295 MMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRV 354
Query: 178 -----AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A EL EM+ G+ PD +TY +L++ ++ +V+ +Y +M G+ P Y
Sbjct: 355 HKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHY 414
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
L+ + GM+ +A+ F+ M + K+D A+Y M+ G+ E + ++D+
Sbjct: 415 IPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDE 474
Query: 293 G----GIEFSEELQEFVK-GELSKEGREEEVVKLM 322
G + +S + F K G+L+ E V+K M
Sbjct: 475 GLIPDAVTYSIPINMFAKSGDLAA---AERVLKQM 506
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 136/291 (46%), Gaps = 11/291 (3%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEEL-KEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
V D V Y+ ++ R G D L + E + + Y +LM+ +
Sbjct: 53 VRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQ 112
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A+ ++ V+ V +++ LC+ D A++L + M P N+
Sbjct: 113 AVGLLRSM--QDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEP-----NVV 165
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ + GYC GR++ +VF +M PD + + LID LC++G + +A + M
Sbjct: 166 VYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMM 225
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+++G+ P+ TY +L+++ + V + + M + G++P++ YN L+ L V +
Sbjct: 226 TERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEM 285
Query: 246 DEAKSFFDIMVK---KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
DEA + + M++ +++ D ++ ++ L G + + L++ + ++G
Sbjct: 286 DEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENG 336
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 109/267 (40%), Gaps = 41/267 (15%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V Y+ L+ G + D L EE+ + V D + + S++ G G
Sbjct: 263 KGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWM 322
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A++ A+ + + + VA N ++ L K +A++L D M + P
Sbjct: 323 RQALQV--RAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSF--- 377
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++++ +G+C + + A +M P+ + + L+ +C GM+ +A +L+
Sbjct: 378 --TYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFN 435
Query: 184 EMS----------------------------------DKGVNPDEYTYGLLMDACFEVNR 209
EM D+G+ PD TY + ++ +
Sbjct: 436 EMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGD 495
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ ++M SG P++AV++ L+
Sbjct: 496 LAAAERVLKQMTASGFVPDVAVFDSLI 522
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 10/292 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D ++ L+ G +G LF+++ + G + V YG+L+ G G
Sbjct: 135 GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE--GFQPNVVTYGTLINGLCKVGNTS 192
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ E + + + V ++++D+LC + + EA +F M K ++ N+
Sbjct: 193 AAIRLLRSM--EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMIT-----KGISPNI 245
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C +K + +M + + PD + N ++D LCK GM+AEA ++
Sbjct: 246 VTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDM 305
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +GV P+ TY LMD N VD F MV N+ YN L+ ++
Sbjct: 306 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS 365
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+D+A F+ M ++ L + +Y ++ L G+L + + + ++ G I
Sbjct: 366 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI 417
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 136/286 (47%), Gaps = 13/286 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
GV + V Y +LM G+ ++ + A++ ++ V ++ + ++ N++++ C D
Sbjct: 310 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA--NVISYNTLINGYCKIQSVD 367
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A+ LF+ M + P N ++N + G C GR +DAI +F +M PD ++
Sbjct: 368 KAMYLFEEMSRQELTP-----NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVT 422
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ L D LCKN L +A L + +PD Y ++D ++D F +
Sbjct: 423 YRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLS 482
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
GL+PN+ YN ++ L + G+L EA F M K +D +Y + + +
Sbjct: 483 SKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL 542
Query: 281 EILEIVGGILDDGGIEFSEELQ--EFVKGELSKEGREEEVVKLMEK 324
+E++ +L G FS ++ + G LS +G ++ V +++ K
Sbjct: 543 RTIELLEEMLARG---FSVDVSTTTLLVGMLSDDGLDQSVKQILCK 585
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 35/260 (13%)
Query: 100 FDEALKLFDRMKNEHNPPKRLAVN---------------------LGSFNVMADGY---- 134
DEAL F+RM ++ PP + N + SF + D Y
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 135 -----CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
C R A K+ + PD +F LI LC G + EA L+ +M +G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
P+ TYG L++ +V R M +PN+ V++ L+ L + + EA
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGE 308
+ F M+ K + + +Y ++ L + + ++ ++D + L V
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA- 289
Query: 309 LSKEG---REEEVVKLMEKK 325
L KEG +VV +M +
Sbjct: 290 LCKEGMVAEAHDVVDMMIHR 309
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 144/319 (45%), Gaps = 48/319 (15%)
Query: 41 GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF 100
G D V Y +++ G F +G ++A Y+E + + V AV NS++ AL
Sbjct: 5 GRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEML--DRRVSPDAVTYNSIIAALSKAQAM 62
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
D A+++ M + N ++N + GYC G+ + AI +FRKM PD +
Sbjct: 63 DRAMEVLTVM---------VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVV 113
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD------ACFEVN------ 208
++N+L+D LCKNG EA +++ M +G+ PD TYG L+ A E++
Sbjct: 114 TYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALM 173
Query: 209 -----------------------RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+VD+ F KM GL PN Y ++ L ++G L
Sbjct: 174 VQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRL 233
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
D+A F+ M+ K L + Y ++ AL K ++ E++ ILD GI +
Sbjct: 234 DDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQ-GINPNIVFFNT 292
Query: 305 VKGELSKEGREEEVVKLME 323
+ L KEGR E KL +
Sbjct: 293 ILDSLCKEGRVIESKKLFD 311
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 141/315 (44%), Gaps = 34/315 (10%)
Query: 43 VVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE 102
V+ + Y S+M GY G E+A+ + + + ++ V NS++D LC NGK E
Sbjct: 73 VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSD--GIEPDVVTYNSLMDYLCKNGKCTE 130
Query: 103 ALKLFDRMKNEHNPP------------------------------KRLAVNLGSFNVMAD 132
A K+FD M P + ++ FN++
Sbjct: 131 ARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILIC 190
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
Y Q + + + VF KM + +P+ +++ +ID LCK G L +A + +M DKG+ P
Sbjct: 191 AYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTP 250
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+ Y L+ A ++ + +++D G+ PN+ +N ++ L + G + E+K F
Sbjct: 251 NVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLF 310
Query: 253 DIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSK 311
D++ + D +Y ++ GK+D ++++ G++ G S + G K
Sbjct: 311 DLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLING-YCK 369
Query: 312 EGREEEVVKLMEKKE 326
R E+ + L ++ E
Sbjct: 370 INRMEDALALFKEME 384
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 115/233 (49%), Gaps = 9/233 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y ++ G + G D FE++ +K G+ + VVY SL+
Sbjct: 211 QGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDK--GLTPNVVVYTSLIHALCTYDKW 268
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A E E + + + + V N++LD+LC G+ E+ KLFD + + P +
Sbjct: 269 EKAEELIFEILDQ--GINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVI--- 323
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++ + DGYC G+ A+++ M PD+++++ LI+ CK + +A L+
Sbjct: 324 --TYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFK 381
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EM GVNPD TY +++ F R + ++ +SG + L+ YN ++
Sbjct: 382 EMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIIL 434
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 127/253 (50%), Gaps = 11/253 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V++ L+ + + D V +F +++++ G+ + V Y +++ G
Sbjct: 173 MVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQ--GLTPNAVNYRTVIDGLCKL 230
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKL-FDRMKNEHNPPKR 119
G ++AM + + + + + + V S++ ALC K+++A +L F+ + NP
Sbjct: 231 GRLDDAMLNFEQMI--DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINP--- 285
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ FN + D C +GR ++ ++F +G +PD ++++ LID C G + A
Sbjct: 286 ---NIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAM 342
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L M G+ PD TY L++ ++NR++D F++M +G+ P++ YN ++ L
Sbjct: 343 KLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGL 402
Query: 240 VQVGMLDEAKSFF 252
+ AK +
Sbjct: 403 FRTRRTAAAKELY 415
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG--------------- 198
RC PD +S+N +ID L K G + +A Y EM D+ V+PD TY
Sbjct: 6 RCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRA 65
Query: 199 ------LLMDACFEVNRVDDGAT----------YFRKMVDSGLRPNLAVYNRLVGKLVQV 242
++M CF N + G FRKM G+ P++ YN L+ L +
Sbjct: 66 MEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKN 125
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G EA+ FD MVK+ LK D +Y ++ + G L E+ +++ ++ G++ +
Sbjct: 126 GKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLL-ALMVQNGMQLDHHV 184
Query: 302 QEFVKGELSKEGREEEVVKLMEKKEREKAEAKA 334
+ +K+ + +EVV + K ++ A
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNA 217
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 114/239 (47%), Gaps = 8/239 (3%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
V +GSL+ G+ + +A V S + + V N+++D LC NG+ + AL+L
Sbjct: 142 VTFGSLLHGFCLVNRIGDAFSLVILMV--KSGYEPNVVVYNTLIDGLCKNGELNIALELL 199
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
+ M+ K L ++ ++N + G C GR+ DA + R M + +PD ++F LID
Sbjct: 200 NEMEK-----KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
K G L EA+ELY EM V+P+ TY +++ R+ D F M G P
Sbjct: 255 VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
N+ YN L+ + M+DE F M + D +Y ++ GKL L+I
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 134/278 (48%), Gaps = 10/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV + V+Y+ ++ G ++ D + +F +++K G+ +D V Y +L+ G G
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK--GIRADAVTYNTLISGLSNSGRWT 761
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + V + + + +++D G EA L+ M P N+
Sbjct: 762 DAARLLRDMVKR--KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP-----NV 814
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G+C G DA +F M C PD +++N LI CK+ + + +L+ E
Sbjct: 815 FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 874
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ +G+ D +TY L+ + +++ F +MVD G+ P++ YN L+ L G
Sbjct: 875 MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK 934
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+++A D+ ++ +D +Y +++ L KL E
Sbjct: 935 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 972
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 138/284 (48%), Gaps = 18/284 (6%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
G+ V + L+ GF R GD+ + L + G + VVY +L+ G G
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK-----SGYEPNVVVYNTLIDGLCKNG 190
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKRL 120
A+E NE E + V N++L LC +G++ +A ++ D MK NP
Sbjct: 191 ELNIALELLNEM--EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP---- 244
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +F + D + QG +A E++++M + P+ +++N++I+ LC +G L +A++
Sbjct: 245 --DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M+ KG P+ TY L+ + VD+G F++M G ++ YN L+
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEIL 283
QVG L A F MV +++ D ++ ++ L G+++ L
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 164/383 (42%), Gaps = 27/383 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G+ + VVY+ L+ G ++G+ + L E+++K G+ +D V Y +L+ G
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK--GLGADVVTYNTLLTGLCYS 224
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + + S+ V +++D G DEA +L+ M P +
Sbjct: 225 GRWSDAARMLRDMMKR--SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + +G C GR DA + F M C P+ +++N LI CK M+ E +
Sbjct: 283 -----TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ MS +G N D +TY L+ +V ++ F MV + P++ + L+ L
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397
Query: 241 QVGMLDEAKSFFDIMVKKLK-MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
G ++ A FD M + K + +Y M+ L K+++ E+ + +G +
Sbjct: 398 VNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDAR 457
Query: 300 ELQEFVKG-----------ELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAK---- 344
+ G EL + +EE ++ M ++ E + E + + +
Sbjct: 458 TYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWE 517
Query: 345 --RSARAAIASLIPSKFGDKVGG 365
+S + LIP F V G
Sbjct: 518 RSKSNPFWMQRLIPIAFSSSVKG 540
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V Y+ L+ GF + + +LF E+ + G+V D Y +L+ GY
Sbjct: 840 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ--GLVGDAFTYNTLIHGYCQA 897
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A + +N V + V V N +LD LCNNGK ++AL + + ++ +
Sbjct: 898 GKLNVAQKVFNRMV--DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKS-----EM 950
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
V++ ++N++ G C + K+A +FR + PD +++ +I LC+ G+ EA++
Sbjct: 951 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 1010
Query: 181 LYGEMSDKGVNPDEYTY 197
L M + G P E Y
Sbjct: 1011 LCRRMKEDGFMPSERIY 1027
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 128/275 (46%), Gaps = 10/275 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG AD V Y+ L+ G G RL ++ ++ + + + + +L+ + +G
Sbjct: 738 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR--KIDPNVIFFTALIDTFVKEGNL 795
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA Y E + SV + NS+++ C +G +A +FD M ++ P +
Sbjct: 796 LEARNLYKEMI--RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP-----D 848
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + G+C R +D +++F +M D ++N LI C+ G L A++++
Sbjct: 849 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 908
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M D GV+PD TY +L+D +++ + S + ++ YN ++ L +
Sbjct: 909 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 968
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
L EA F + +K +K D +Y M+ L G
Sbjct: 969 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 6/184 (3%)
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
+F++A LF M + P ++ F + R++ I +KM Y S D
Sbjct: 51 RFEDAFALFFEMVHSQPLP-----SIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
SF LI C+ L+ A + G+M G P T+G L+ VNR+ D +
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
MV SG PN+ VYN L+ L + G L+ A + M KK L D +Y ++ L G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 278 KLDE 281
+ +
Sbjct: 226 RWSD 229
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
V LGS + +G+C RF++A+ + M + P+ + +N +I+ LCKN L A E+
Sbjct: 675 VTLGS---LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 731
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ M KG+ D TY L+ R D A R MV + PN+ + L+ V+
Sbjct: 732 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 791
Query: 242 VGMLDEAKSFFDIMVKK 258
G L EA++ + M+++
Sbjct: 792 EGNLLEARNLYKEMIRR 808
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 10/213 (4%)
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
KFD+A LF M P ++ F + +F I ++ KM S D
Sbjct: 584 KFDDAFSLFCEMLQSRPIP-----SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHD 638
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
SF LI C+ L+ A L G+M G P T G L++ + NR + +
Sbjct: 639 LYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD 698
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
M G PN+ +YN ++ L + L+ A F M KK ++ D +Y ++ LS+ G
Sbjct: 699 SMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 758
Query: 278 KLDE----ILEIVGGILDDGGIEFSEELQEFVK 306
+ + + ++V +D I F+ + FVK
Sbjct: 759 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 791
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 135/290 (46%), Gaps = 10/290 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF + V Y L+ G + G + RL +++ G D VVY S++
Sbjct: 164 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQ--GNCQPDVVVYTSIIDSLCKD 221
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A ++E + + + S NS++ ALCN ++ L + M N ++
Sbjct: 222 RQVTQAFNLFSEMIHQ--GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS-----KI 274
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ F+ + D C +G+ +A +V M + P+ +++N L+D C + EA +
Sbjct: 275 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 334
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M KG PD +Y L++ ++ R++ F +M L PN Y+ L+ L
Sbjct: 335 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 394
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGI 289
VG L +A + F MV + ++ D SY ++ L +LDE + ++ I
Sbjct: 395 HVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAI 444
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 120/243 (49%), Gaps = 7/243 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+++ LC GK E L LFD+M E P N+ ++ + +G C G AI +
Sbjct: 142 NTLIRGLCVEGKIGEVLHLFDKMIGEGFQP-----NVVTYGTLINGLCKVGSTSAAIRLL 196
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
R M + C PD + + ++ID LCK+ + +A L+ EM +G++P +TY L+ A +
Sbjct: 197 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 256
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+MV+S + PN+ +++ +V L + G + EA D+M+K+ ++ + +Y
Sbjct: 257 CEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTY 316
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
+M ++DE +++ ++ G + G K R E+ + L E+
Sbjct: 317 NALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGY-CKIQRIEKAMYLFEEMC 375
Query: 327 REK 329
R++
Sbjct: 376 RKE 378
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 9/239 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF D V YS L+ G+ + + LFEE+ K ++ + V Y +LM G
Sbjct: 339 MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRK--ELIPNTVTYSTLMHGLCHV 396
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ ++E V V+ +LD LC N + DEA+ L ++ + P
Sbjct: 397 GRLQDAIALFHEMVTRGQIPDF--VSYCILLDYLCKNRRLDEAIALLKAIEGSNMDP--- 451
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + ++ DG C G + A ++F + P+ ++ +I+ LC+ G+LAEA +
Sbjct: 452 --DIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 509
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L+GEM KG +P+ TY L+ N G ++M+ G +++ LV L
Sbjct: 510 LFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 568
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
GV + V Y +LM G+ ++ +EA++ ++ V + + V+ +++++ C + +
Sbjct: 308 GVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAP--DVVSYSTLINGYCKIQRIE 365
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A+ LF+ M K L N +++ + G C GR +DAI +F +M PD +S
Sbjct: 366 KAMYLFEEMCR-----KELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVS 420
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ L+D LCKN L EA L + ++PD Y +++D ++ F +
Sbjct: 421 YCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLS 480
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
GL PN+ Y ++ L Q G+L EA F M +K
Sbjct: 481 SKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK 517
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDR-MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N ++++ C+ + A + + +K H P N+ +FN + G C +G+ + + +
Sbjct: 107 NILINSFCHLQRLGFAFSVLAKILKLGHQP------NIATFNTLIRGLCVEGKIGEVLHL 160
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F KM P+ +++ LI+ LCK G + A L M PD Y ++D+ +
Sbjct: 161 FDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK 220
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDAS 265
+V F +M+ G+ P++ YN L+ L + + + MV K+ +
Sbjct: 221 DRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVI 280
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDG 293
+ ++ AL GK+ E ++V ++ G
Sbjct: 281 FSTVVDALCKEGKVMEAHDVVDMMIKRG 308
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 43/268 (16%)
Query: 96 NNGKFDEALKLFDRMKNEHNPP-----KRLAV-------------------------NLG 125
N D+AL F+RM + H PP +L + N+
Sbjct: 45 NFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIY 104
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+ N++ + +C R A V K+ + P+ +FN LI LC G + E L+ +M
Sbjct: 105 TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 164
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+G P+ TYG L++ +V R M +P++ VY ++ L + +
Sbjct: 165 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 224
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL----EIVGGILDDGGIEFSEE 300
+A + F M+ + + +Y ++ AL + + + E+V + + FS
Sbjct: 225 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST- 283
Query: 301 LQEFVKGELSKEGR---EEEVVKLMEKK 325
V L KEG+ +VV +M K+
Sbjct: 284 ----VVDALCKEGKVMEAHDVVDMMIKR 307
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 135/290 (46%), Gaps = 10/290 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF + V Y L+ G + G + RL +++ G D VVY S++
Sbjct: 155 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQ--GNCQPDVVVYTSIIDSLCKD 212
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A ++E + + + S NS++ ALCN ++ L + M N ++
Sbjct: 213 RQVTQAFNLFSEMIHQ--GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS-----KI 265
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ F+ + D C +G+ +A +V M + P+ +++N L+D C + EA +
Sbjct: 266 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 325
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M KG PD +Y L++ ++ R++ F +M L PN Y+ L+ L
Sbjct: 326 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 385
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGI 289
VG L +A + F MV + ++ D SY ++ L +LDE + ++ I
Sbjct: 386 HVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAI 435
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 120/243 (49%), Gaps = 7/243 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+++ LC GK E L LFD+M E P N+ ++ + +G C G AI +
Sbjct: 133 NTLIRGLCVEGKIGEVLHLFDKMIGEGFQP-----NVVTYGTLINGLCKVGSTSAAIRLL 187
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
R M + C PD + + ++ID LCK+ + +A L+ EM +G++P +TY L+ A +
Sbjct: 188 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 247
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+MV+S + PN+ +++ +V L + G + EA D+M+K+ ++ + +Y
Sbjct: 248 CEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTY 307
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
+M ++DE +++ ++ G + G K R E+ + L E+
Sbjct: 308 NALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGY-CKIQRIEKAMYLFEEMC 366
Query: 327 REK 329
R++
Sbjct: 367 RKE 369
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 9/239 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF D V YS L+ G+ + + LFEE+ K ++ + V Y +LM G
Sbjct: 330 MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRK--ELIPNTVTYSTLMHGLCHV 387
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ ++E V V+ +LD LC N + DEA+ L ++ + P
Sbjct: 388 GRLQDAIALFHEMVTRGQIPDF--VSYCILLDYLCKNRRLDEAIALLKAIEGSNMDP--- 442
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + ++ DG C G + A ++F + P+ ++ +I+ LC+ G+LAEA +
Sbjct: 443 --DIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 500
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L+GEM KG +P+ TY L+ N G ++M+ G +++ LV L
Sbjct: 501 LFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 559
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
GV + V Y +LM G+ ++ +EA++ ++ V + + + V+ +++++ C + +
Sbjct: 299 GVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV--VSYSTLINGYCKIQRIE 356
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A+ LF+ M K L N +++ + G C GR +DAI +F +M PD +S
Sbjct: 357 KAMYLFEEMCR-----KELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVS 411
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ L+D LCKN L EA L + ++PD Y +++D ++ F +
Sbjct: 412 YCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLS 471
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
GL PN+ Y ++ L Q G+L EA F M +K
Sbjct: 472 SKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK 508
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDR-MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N ++++ C+ + A + + +K H P N+ +FN + G C +G+ + + +
Sbjct: 98 NILINSFCHLQRLGFAFSVLAKILKLGHQP------NIATFNTLIRGLCVEGKIGEVLHL 151
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F KM P+ +++ LI+ LCK G + A L M PD Y ++D+ +
Sbjct: 152 FDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK 211
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDAS 265
+V F +M+ G+ P++ YN L+ L + + + MV K+ +
Sbjct: 212 DRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVI 271
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDG 293
+ ++ AL GK+ E ++V ++ G
Sbjct: 272 FSTVVDALCKEGKVMEAHDVVDMMIKRG 299
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 43/268 (16%)
Query: 96 NNGKFDEALKLFDRMKNEHNPP-----KRLAV-------------------------NLG 125
N D+AL F+RM + H PP +L + N+
Sbjct: 36 NFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIY 95
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+ N++ + +C R A V K+ + P+ +FN LI LC G + E L+ +M
Sbjct: 96 TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 155
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+G P+ TYG L++ +V R M +P++ VY ++ L + +
Sbjct: 156 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 215
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL----EIVGGILDDGGIEFSEE 300
+A + F M+ + + +Y ++ AL + + + E+V + + FS
Sbjct: 216 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST- 274
Query: 301 LQEFVKGELSKEGR---EEEVVKLMEKK 325
V L KEG+ +VV +M K+
Sbjct: 275 ----VVDALCKEGKVMEAHDVVDMMIKR 298
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 139/290 (47%), Gaps = 10/290 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D V Y L+ G + G++ +L + KL V + V+Y +++ G
Sbjct: 168 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKL--VQLNAVMYNTVIDGMSKDKHVN 225
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + Y+E V + S V ++++ GK +A+ LF++M E+ P ++
Sbjct: 226 DAFDLYSEMVAKRISP--DVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKP-----DV 278
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN++ DG+C +GR K A V M P+ +FN L+D CK+ + E + ++
Sbjct: 279 YTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAM 338
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +G+ P+ TY LMD V +V+ F M G+ N+ YN ++ ++
Sbjct: 339 MMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKK 398
Query: 245 LDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+D+A K F ++ K + D +Y ++ L GK+ ++V + D G
Sbjct: 399 VDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRG 448
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 137/282 (48%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D + + + GF G ++L G D V YG+L+ G G
Sbjct: 133 GYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVAL--GFHLDQVSYGTLINGLCKVGETR 190
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ G+ V+++AV N+V+D + + ++A L+ M KR++ ++
Sbjct: 191 AALQLLRRVDGK--LVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEM-----VAKRISPDV 243
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + G+ G+ KDAI++F KM PD +FN L+D CK G L +A+ +
Sbjct: 244 VTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDM 303
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + + P+ T+ L+D + ++ +G T F M+ G++PN+ Y L+ V
Sbjct: 304 MMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQ 363
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+++AK F+ M ++ + + SY M+ K+D+ +++
Sbjct: 364 VNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKL 405
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 96/179 (53%), Gaps = 18/179 (10%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+K + V S++D C + ++A K+F+ M + + N+ S+N+M +G+C +
Sbjct: 344 IKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQ-----RGVTANVHSYNIMINGFCKIKK 398
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
A+++F +M PD +++N+LID LCK+G ++ A +L EM D+G P+ TY
Sbjct: 399 VDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNS 458
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVK 257
+++A K+ D G++PN+ L+ L Q G L+ A+ F D++VK
Sbjct: 459 ILNALLT------------KLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 102/221 (46%), Gaps = 8/221 (3%)
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A+ +N + +N + ++A N +L +L + + L L +M+ E P N
Sbjct: 52 AVSLFNSLLHQNPT--LTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINP-----NFV 104
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+FN++ + +C G A V K+ + PD ++ N I C G + +A + ++
Sbjct: 105 TFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKL 164
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
G + D+ +YG L++ +V R++ ++ N +YN ++ + + +
Sbjct: 165 VALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHV 224
Query: 246 DEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEI 285
++A + MV K++ D +Y +++ GKL + +++
Sbjct: 225 NDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDL 265
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 10/292 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D ++ L+ G +G LF+++ + G + V YG+L+ G G
Sbjct: 135 GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE--GFQPNVVTYGTLINGLCKVGNTS 192
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ E + + + V ++++D+LC + + EA +F M K ++ N+
Sbjct: 193 AAIRLLRSM--EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMIT-----KGISPNI 245
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C +K + +M + + PD + N ++D LCK GM+AEA ++
Sbjct: 246 VTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDM 305
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +GV P+ TY LMD N VD F MV N+ YN L+ ++
Sbjct: 306 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS 365
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+D+A F+ M ++ L + +Y ++ L G+L + + + ++ G I
Sbjct: 366 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI 417
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 136/286 (47%), Gaps = 13/286 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
GV + V Y +LM G+ ++ + A++ ++ V ++ + ++ N++++ C D
Sbjct: 310 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA--NVISYNTLINGYCKIQSVD 367
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A+ LF+ M + P N ++N + G C GR +DAI +F +M PD ++
Sbjct: 368 KAMYLFEEMSRQELTP-----NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVT 422
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ L D LCKN L +A L + +PD Y ++D ++D F +
Sbjct: 423 YRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLS 482
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
GL+PN+ YN ++ L + G+L EA F M K +D +Y + + +
Sbjct: 483 SKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL 542
Query: 281 EILEIVGGILDDGGIEFSEELQ--EFVKGELSKEGREEEVVKLMEK 324
+E++ +L G FS ++ + G LS +G ++ V +++ K
Sbjct: 543 RTIELLEEMLARG---FSVDVSTTTLLVGMLSDDGLDQSVKQILCK 585
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 35/260 (13%)
Query: 100 FDEALKLFDRMKNEHNPPKRLAVN---------------------LGSFNVMADGY---- 134
DEAL F+RM ++ PP + N + SF + D Y
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 135 -----CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
C R A K+ + PD +F LI LC G + EA L+ +M +G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
P+ TYG L++ +V R M +PN+ V++ L+ L + + EA
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGE 308
+ F M+ K + + +Y ++ L + + ++ ++D + L V
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA- 289
Query: 309 LSKEG---REEEVVKLMEKK 325
L KEG +VV +M +
Sbjct: 290 LCKEGMVAEAHDVVDMMIHR 309
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 145/320 (45%), Gaps = 14/320 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ G+ R G D RL + V D Y +++G +G
Sbjct: 104 GAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP-----VPPDAYTYTPIIRGLCDRGRVG 158
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ ++ + + S V +L+A+C + F EA+ + D M+ + P N+
Sbjct: 159 DALALLDDML--QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTP-----NI 211
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++NV+ +G C +GR DA E+ ++ Y PD +S+ ++ LC + + L+ E
Sbjct: 212 VTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAE 271
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M DK P+E T+ +L+ V+ ++M G PN + N ++ + + G
Sbjct: 272 MVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGR 331
Query: 245 LDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+D+A F + M + D SY +++ L G+ + E++ ++
Sbjct: 332 VDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNT 391
Query: 304 FVKGELSKEGREEEVVKLME 323
F+ L ++G E+ +KL+E
Sbjct: 392 FI-CILCQKGLIEQAIKLIE 410
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 141/282 (50%), Gaps = 13/282 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + V ++ + + G + +L E + E G V Y +L+ G+ ++
Sbjct: 377 MVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEY--GCSVGIVTYNALVHGFCVQ 434
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+E +N E +++ + ++L LC+ + D A +L M + P
Sbjct: 435 GRVDSALELFNNLPCEPNTITYT-----TLLTGLCHAERLDAAAELLAGMIQKDCP---- 485
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N +FNV+ +C +G ++A+E+ +M E+ C+P+ ++FN L+D + K+ EA E
Sbjct: 486 -LNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALE 544
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L + KGV+ D TY ++D +R ++ + D G+RP + +YN+++ L
Sbjct: 545 LLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALC 604
Query: 241 QVGMLDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDE 281
+ D+A FF MV M ++++Y +++ L+ G L E
Sbjct: 605 KRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKE 646
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 19/294 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ ++ G R+G D + L G D V Y +++KG
Sbjct: 202 MRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSY--GFQPDIVSYTTVLKGLCAA 259
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL----CNNGKFDEALKLFDRMKNEHNP 116
++ + E V + V N D L C G + A+++ +M
Sbjct: 260 RRWDDVKVLFAEMVDKK------CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCT 313
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P N N++ + C QGR DA + MG Y C+PDT+S+ ++ LC+ G
Sbjct: 314 P-----NTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWE 368
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
A+EL EM K P+E T+ + + ++ M + G + YN LV
Sbjct: 369 HAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALV 428
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
G +D A F+ + + + +Y ++ L +LD E++ G++
Sbjct: 429 HGFCVQGRVDSALELFNNL--PCEPNTITYTTLLTGLCHAERLDAAAELLAGMI 480
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
LAEA L S +G PD Y L+ R D A R SG ++ YN
Sbjct: 55 LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
LV + G LD A+ M + D +Y +++ L D G++ + L ++ +L G
Sbjct: 115 LVAGYCRYGRLDAARRLIASM--PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 155/324 (47%), Gaps = 11/324 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V Y+ L+LG + G D + + + + E+ G+ + V Y L+ G+F K
Sbjct: 455 MVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILER--GLKPNAVTYTLLIDGFFKK 512
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A + + + N + + N+V++ L G+ E D++ N +
Sbjct: 513 GDSERAFVVFEQMMAAN--IAPTDHTFNTVINGLGKTGRVSETQ---DKLNNFIK--QGF 565
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + DG+ +G A+ +R+M E SPD +++ +LID LCK+ + A E
Sbjct: 566 VSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALE 625
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M KG+ D Y L+D +++ ++ + +F +++D GL PN VYN ++ +
Sbjct: 626 MHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFI 685
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ ++ A + M+K K+ D Y ++ L GKL L++ +L +
Sbjct: 686 HLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIV 745
Query: 300 ELQEFVKGELSKEGREEEVVKLME 323
+ G LS G+ E K+++
Sbjct: 746 MYTVLING-LSNNGQLENASKILK 768
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 144/336 (42%), Gaps = 76/336 (22%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEEL--------------------------- 36
+G + V Y+ L+ GF + GDS+ F +FE++
Sbjct: 493 RGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSE 552
Query: 37 -KEKLG-----GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
++KL G VS + Y S++ G+F +G + A+ Y E S + + S+
Sbjct: 553 TQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMC--ESGISPDVITYTSL 610
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+D LC + K AL++ MK K + +++ +++ + DG+C + A + F ++
Sbjct: 611 IDGLCKSNKIGLALEMHSDMKY-----KGMKLDVVAYSALIDGFCKMHDMESASKFFTEL 665
Query: 151 GEYRCSPDTLSFNNLIDQ-----------------------------------LCKNGML 175
+ +P+T+ +N++I L K G L
Sbjct: 666 LDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKL 725
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+ A +LY EM K + PD Y +L++ ++++ + ++M + + P++ VYN L
Sbjct: 726 SLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNIL 785
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ + G L EA D M+ K L DD +Y ++
Sbjct: 786 IAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 10/254 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + +V LM G+ GD + +LF+E+ E GGVV D V++ L+ G G E
Sbjct: 320 GLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVE--GGVVPDVVIFSVLINGCSKVGDME 377
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E Y + ++ + NS+L+ + A LFD EH N+
Sbjct: 378 KAYELYTRM--KLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAV-EHG-----ITNV 429
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ G+ +A ++ KM +P +S+NNLI CK G + +A +
Sbjct: 430 VTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKS 489
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ ++G+ P+ TY LL+D F+ + F +M+ + + P +N ++ L + G
Sbjct: 490 ILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGR 549
Query: 245 LDEAKSFFDIMVKK 258
+ E + + +K+
Sbjct: 550 VSETQDKLNNFIKQ 563
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V YS L+ GF + D + + F EL + G+ + VVY S++ G+
Sbjct: 633 KGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDI--GLTPNTVVYNSMISGFIHLNNM 690
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A+ + E + + S++ L GK AL L+ M + K + +
Sbjct: 691 EAALNLHQEMIKNKVPCDLQVYT--SIIGGLLKEGKLSLALDLYSEMLS-----KDIVPD 743
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + V+ +G G+ ++A ++ ++M +P L +N LI + G L EA L+
Sbjct: 744 IVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHD 803
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
EM DKG+ PD+ TY +L++ +V+ G+
Sbjct: 804 EMLDKGLVPDDTTYDILVNGKLKVSHTLGGS 834
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 119/251 (47%), Gaps = 9/251 (3%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
+L++E+ E+ G+ D +M+ +G EE + + EA G +++ A A + +
Sbjct: 206 QLYDEMVER--GIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGR--GLEVDAAAYSIL 261
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ A+C + A +L M+ P + G++ + QG F +A+ + +M
Sbjct: 262 VQAVCRRLDLNLACELLKEMREFGWVPSK-----GTYTAVIVACVKQGNFVEALRLKDEM 316
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+ + +L+ C G + A +L+ E+ + GV PD + +L++ C +V +
Sbjct: 317 VSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDM 376
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM 270
+ + +M G++PN+ + N L+ + +L+ A FD V+ + +Y ++
Sbjct: 377 EKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILL 436
Query: 271 KALSDGGKLDE 281
K L + GK++E
Sbjct: 437 KWLGELGKVNE 447
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
FN + + + DA+E FR M E+ P NNL+ + + M+ +A +LY EM
Sbjct: 153 FNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMV 212
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++G+ D YT ++M AC + + ++ +F++ GL + A Y+ LV
Sbjct: 213 ERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILV 262
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 170/365 (46%), Gaps = 43/365 (11%)
Query: 3 VKGFVADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ G + P V+YS ++ + + LF E+ K G+ +D V Y +L+ G+ ++
Sbjct: 190 IDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVK--GISADVVTYSTLIYGFCIE 247
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM---------- 110
G +EA+ NE V + ++ + N ++DALC GK EA + M
Sbjct: 248 GKLKEAIGLLNEMVLK--TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVI 305
Query: 111 ----------------KNEH--NPPKRLAV--NLGSFNVMADGYCGQGRFKDAIEVFRKM 150
K +H N + V ++ ++ ++ +G+C +A+ +F++M
Sbjct: 306 TYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEM 365
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+ P +++++LID LCK+G + +L EM D+G + TY L+D + +
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHL 425
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFM 269
D F KM D G+RPN + L+ L + G L +A+ F D++ K ++ +Y M
Sbjct: 426 DRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE------GREEEVVKLME 323
+ G L+E L ++ + D+G I + + + K+ G +++V +++E
Sbjct: 486 IDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNVGFDKKVWEIVE 545
Query: 324 KKERE 328
K+ E
Sbjct: 546 HKKGE 550
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 146/322 (45%), Gaps = 11/322 (3%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+KG D + + L+ F G F + ++ ++ G D V +L+KG +KG
Sbjct: 87 LKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKR--GYPPDTVTLNTLIKGLCLKGQ 144
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
++A+ +++ + + +++ V+ ++++ +C G A+KL ++ P
Sbjct: 145 VKKALHFHDKLLAQ--GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKP----- 197
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ ++ + D C +A +F +M S D ++++ LI C G L EA L
Sbjct: 198 NVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLL 257
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM K +NP+ YTY +L+DA + +V + + M+ + ++P++ Y+ L+ V
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLV 317
Query: 243 GMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+ +A+ F+ M + + D +Y ++ +DE L + + +
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377
Query: 302 QEFVKGELSKEGREEEVVKLME 323
+ G L K GR V L++
Sbjct: 378 SSLIDG-LCKSGRIPYVWDLID 398
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 99/193 (51%), Gaps = 8/193 (4%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ ++++ LC G+ ++AL D++ + +N S+ + +G C G + A
Sbjct: 996 TITFTTLINGLCLKGQVNKALHFHDKLLAQ-----GFQLNQVSYGTLINGVCKIGDTRAA 1050
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
I++ RK+ PD + +N +ID LCK+ ++++A L+ EM+ KG++ D TY L+
Sbjct: 1051 IKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYG 1110
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG--MLDEAKSFFDIMVKK-LK 260
V ++ + KMV + PN+ YN LV L + G +LDE+ S M K
Sbjct: 1111 FCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCK 1170
Query: 261 MDDASYKFMMKAL 273
+ +++ ++ AL
Sbjct: 1171 ANAVTFEIIISAL 1183
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 11/224 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G+ D + ++ L+ G G + ++L + G + V YG+L+ G G
Sbjct: 990 RGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQ--GFQLNQVSYGTLINGVCKIGDT 1047
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A++ + G + K V N+++DALC + +A LF M K ++ +
Sbjct: 1048 RAAIKLLRKIDGRLT--KPDVVMYNTIIDALCKHQLVSKAYGLFFEMN-----VKGISAD 1100
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG--MLAEAEEL 181
+ ++N + G+C G+ K+AI + KM +P+ ++N L+D LCK G +L E+ +
Sbjct: 1101 VVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSM 1160
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+M D G + T+ +++ A FE + D +M+ GL
Sbjct: 1161 LSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 108/229 (47%), Gaps = 4/229 (1%)
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
K + +L + N++ + +C G+ + K+ + PDT++F LI+ LC G + +
Sbjct: 955 KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A + ++ +G ++ +YG L++ ++ RK+ +P++ +YN ++
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074
Query: 238 KLVQVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
L + ++ +A FF++ VK + D +Y ++ GKL E + ++ ++ I
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLK-TIN 1133
Query: 297 FSEELQEFVKGELSKEGRE--EEVVKLMEKKEREKAEAKAREAEAAEAA 343
+ + L KEG++ +E + ++ K E +A A E +A
Sbjct: 1134 PNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISA 1182
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA+ F +M R +P + FN ++D K + A L + KG+ PD T +L+
Sbjct: 42 DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLK 260
+ + ++ G + K++ G P+ N L+ L G + +A F D ++ + +
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161
Query: 261 MDDASYKFMMKALSDGG 277
++ SY ++ + G
Sbjct: 162 LNQVSYGTLINGVCKIG 178
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 43/218 (19%)
Query: 101 DEALKLFDRMKN-EHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
D+A+ F+RM H PP + FN + D + + A+ + ++ PD
Sbjct: 41 DDAVSQFNRMLCMRHTPP------IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDL 94
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-C-------------- 204
++ N LI+ C G + + ++ +G PD T L+ C
Sbjct: 95 ITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDK 154
Query: 205 -----FEVNRVDDG--------------ATYFRKMVDSGL-RPNLAVYNRLVGKLVQVGM 244
F++N+V G A + +D L +PN+ +Y+ ++ L + +
Sbjct: 155 LLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQL 214
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ EA F ++ VK + D +Y ++ GKL E
Sbjct: 215 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKE 252
>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
Length = 363
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 152/356 (42%), Gaps = 23/356 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G + V Y+ L+ GF D L EE+ G + D Y +L+ G
Sbjct: 1 MTIWGIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTAT--GCLPDINTYNTLIDGLCKT 58
Query: 61 GMEEEAMECYNEAVGENSS--VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G E N GE + + + ++ C + + A LFD M + P
Sbjct: 59 GRVPEV----NRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALP- 113
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ +F + +GYC G DA + ++ CSPD ++ +L+D CK + EA
Sbjct: 114 ----DVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEA 169
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ M+ P+ Y L+DA + +MV +G++PN Y L+G
Sbjct: 170 HRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGG 229
Query: 239 LVQVGMLDEAKSFFDIMVK--KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
G L+EA + + + K D +Y+ MM L G++ LE++ I G
Sbjct: 230 FCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPP 289
Query: 297 FSEELQEFVKGE--LSKEGRE-----EEVVKLMEKKER-EKAEAKAREAEAAEAAK 344
+ ++GE LS++GR E V++ + ++ R EKA A + E +A+K
Sbjct: 290 RHDIYVALIRGEMTLSRKGRPNAKVYEAVIQELAREGRHEKANALSDELLGNKASK 345
>gi|357159753|ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Brachypodium distachyon]
Length = 460
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 146/313 (46%), Gaps = 11/313 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ R D F + ++E GV + V Y SL+ G+
Sbjct: 40 GMPPDVVTYNTLLAAHCRAAGLDAGFAVLRRMRE--AGVWPNAVTYNSLIVAASRVGLTM 97
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ ++E + + + A + N ++ L +G ++A ++F M + P
Sbjct: 98 RALDLFDEML--RAGIAPDAWSYNVLMHCLFRSGHPEDAYRVFADMAEKGVTP-----CT 150
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG G +A +FR + +++N +I+ LC++G + A + E
Sbjct: 151 TTYNTLLDGLFKAGHATNAYRMFRYLQRVGLPVGIVTYNTMINGLCRSGKVGYARMILRE 210
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ P+ TY +M CF R D G F +++ G P++ Y ++ LV+ G
Sbjct: 211 LGRTEHTPNAVTYTTVMKCCFRYGRFDQGLETFLSLLEGGHIPDVFPYCTVISALVKKGR 270
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
++EA ++ ++M++ ++D A Y ++ GKLD+ E++ ++++GG+E E
Sbjct: 271 VEEANAYSELMIQSGSRLDTACYNTLIHLRCQEGKLDDAFELL-SMMEEGGLESDEYTFS 329
Query: 304 FVKGELSKEGREE 316
+ L K G E
Sbjct: 330 ILVNGLCKLGHIE 342
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 127/310 (40%), Gaps = 41/310 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ LM R G + +R+F ++ EK GV Y +L+ G F
Sbjct: 106 MLRAGIAPDAWSYNVLMHCLFRSGHPEDAYRVFADMAEK--GVTPCTTTYNTLLDGLFKA 163
Query: 61 GMEEEA--MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPP 117
G A M Y + VG + + V N++++ LC +GK A + + + EH P
Sbjct: 164 GHATNAYRMFRYLQRVG----LPVGIVTYNTMINGLCRSGKVGYARMILRELGRTEHTPN 219
Query: 118 K--------------RLAVNLGSFNVMADG--------YCG-------QGRFKDAIEVFR 148
R L +F + +G YC +GR ++A
Sbjct: 220 AVTYTTVMKCCFRYGRFDQGLETFLSLLEGGHIPDVFPYCTVISALVKKGRVEEANAYSE 279
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
M + DT +N LI C+ G L +A EL M + G+ DEYT+ +L++ ++
Sbjct: 280 LMIQSGSRLDTACYNTLIHLRCQEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLCKLG 339
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKF 268
++ M + N+ YN LV L + +D A M KLK DD +Y
Sbjct: 340 HIEAAEKQLCYMEMRDMESNVVAYNCLVDALCKSDQVDAAIRLLHDM--KLK-DDFTYTS 396
Query: 269 MMKALSDGGK 278
++ L G+
Sbjct: 397 LVHGLCRVGR 406
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 2/179 (1%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M R T N + LC++G L AE + + G+ PD TY L+ A
Sbjct: 1 MARARAQLSTRLMNVCLAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAG 60
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+D G R+M ++G+ PN YN L+ +VG+ A FD M++ + D SY
Sbjct: 61 LDAGFAVLRRMREAGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNV 120
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+M L G ++ + + + G + + G L K G ++ +R
Sbjct: 121 LMHCLFRSGHPEDAYRVFADMAEKGVTPCTTTYNTLLDG-LFKAGHATNAYRMFRYLQR 178
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 130/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++GD +F + + G+ V + +LM GY G +
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIMVAQSVFNAITK--WGLRPSVVSFNTLMNGYIRLGDMD 177
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N S V+ + +++ LC K D+A ++FD M + K L N
Sbjct: 178 EGFRLKNAM--HASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLD-----KGLVPNG 230
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCK G L +A +L E
Sbjct: 231 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDE 290
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ-VG 243
MS KG+ PD+ TY L+D C + ++ + ++M+ +R + Y L+ L Q
Sbjct: 291 MSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEER 350
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
LD K +++ LK D +Y ++ G
Sbjct: 351 YLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKG 384
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%), Gaps = 9/220 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D +F+E+ +K G+V +GV + +L+ G+
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDK--GLVPNGVTFTTLIDGHCKN 243
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G +A L D M + P ++
Sbjct: 244 GRVDLAMEIYKQMLSQ--SLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 301
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ +AE+
Sbjct: 302 -----TYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEK 356
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+ EM G+ PD TY ++++ + V G+ ++M
Sbjct: 357 VLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DA E +R E++ + +++ L K Y E+
Sbjct: 58 FSGLITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 117
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP++ +N L+ +++G +D
Sbjct: 118 ECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMD 177
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E + M ++ D +Y ++ L K+D+ E+ +LD G + +
Sbjct: 178 EGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLI 237
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 238 DGH-CKNGR 245
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 137/274 (50%), Gaps = 10/274 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V + L+ GF + G+ D F LF+ ++++ G+ D + Y +L+ GYF GM + +
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQR--GIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
++A+ + VK+ V +S +D +G A ++ RM + P N+ ++ ++
Sbjct: 345 SQAL--HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP-----NVVTYTIL 397
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C GR +A ++ ++ + P +++++LID CK G L LY +M G
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD YG+L+D + + + KM+ +R N+ V+N L+ ++ DEA
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 251 FFDIM-VKKLKMDDASYKFMMKALSDGGKLDEIL 283
F +M + +K D A++ +M+ G+L+E L
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 35/309 (11%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D VV+S + +V+ GD +++ + + G+ + V Y L+KG G
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ--GISPNVVTYTILIKGLCQDGRI 407
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------ 117
EA Y + + ++ S V +S++D C G L++ M PP
Sbjct: 408 YEAFGMYGQIL--KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 118 ------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
+ + +N+ FN + DG+C RF +A++VFR MG Y
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
PD +F ++ G L EA L+ M G+ PD Y L+DA + + G
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKA 272
F M + + ++AV N ++ L + +++A FF+ +++ K++ D +Y M+
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 273 LSDGGKLDE 281
+LDE
Sbjct: 646 YCSLRRLDE 654
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 136/302 (45%), Gaps = 35/302 (11%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
VV++ L+ G+ R D ++F + + G+ D + ++M+ M+G EEA+ +
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMG--IYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE-------------HNPP 117
++ A+A +++DA C + K L+LFD M+ H
Sbjct: 555 FRMF--KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 612
Query: 118 K-----------------RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
K ++ ++ ++N M GYC R +A +F + P+T+
Sbjct: 613 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 672
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+ LI LCKN + A ++ M++KG P+ TYG LMD + ++ F +M
Sbjct: 673 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKL 279
+ G+ P++ Y+ ++ L + G +DEA + F + KL D +Y +++ G+L
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 280 DE 281
E
Sbjct: 793 VE 794
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 9/219 (4%)
Query: 41 GGVVSDGV-VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK 99
GG+ GV +G ++ F KG +A++ ++ V E ++ V+ N VL L + +
Sbjct: 210 GGIEPSGVSAHGFVLDALFCKGEVTKALD-FHRLVMERG-FRVGIVSCNKVLKGL-SVDQ 266
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
+ A +L + + P N+ +F + +G+C +G A ++F+ M + PD
Sbjct: 267 IEVASRLLSLVLDCGPAP-----NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
++++ LID K GML +L+ + KGV D + +D + + + +++
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
M+ G+ PN+ Y L+ L Q G + EA + ++K+
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN----EAVGENSSVKMSAVA 86
+ F L E G + D V Y +++ GY +EA + G N+ V
Sbjct: 622 KFFNNLIE--GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT------VT 673
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
++ LC N D A+++F M + + P N ++ + D + + + ++
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKP-----NAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F +M E SP +S++ +ID LCK G + EA ++ + D + PD Y +L+ +
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 207 VNRVDDGATYFRKMVDSGLRPN 228
V R+ + A + M+ +G++P+
Sbjct: 789 VGRLVEAALLYEHMLRNGVKPD 810
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 44/192 (22%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V F + V + L+ ++ D DG R+F + EK G + V YG LM +F K +
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK--GSKPNAVTYGCLMD-WFSKSV 720
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+ E + KLF+ M+ + P
Sbjct: 721 DIEG------------------------------------SFKLFEEMQEKGISP----- 739
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ S++++ DG C +GR +A +F + + + PD +++ LI CK G L EA LY
Sbjct: 740 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 799
Query: 183 GEMSDKGVNPDE 194
M GV PD+
Sbjct: 800 EHMLRNGVKPDD 811
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 143/293 (48%), Gaps = 16/293 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M+ +GF D Y L+ ++G +LF+E+ E+ GV D Y L+ G+F K
Sbjct: 175 MWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER--GVTPDVACYNILIDGFFKK 232
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
G A E + E + + SV + + N +++ LC GKFDE+ +++ RM KNE
Sbjct: 233 GDILNASEIW-ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER----- 286
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+L +++ + G CG G A V+++M E SPD + +N +++ + G + E
Sbjct: 287 -GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ M +G +Y +L+ FE +VD+ + + + + + Y LV L
Sbjct: 346 ELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404
Query: 240 VQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
+ G L++A S + + +D +Y M+ L G+LDE V G+LD
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDE----VAGVLD 453
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 177/395 (44%), Gaps = 31/395 (7%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ P V+ +++ V R+ E ++ + D V +++K Y M +
Sbjct: 38 GYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPED--VALTVIKAYAKNSMPD 95
Query: 65 EAMECY---NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
+A++ + +E G ++ + NS+L+AL + K+DEA F + L+
Sbjct: 96 QALDIFQRMHEIFGCQPGIR----SYNSLLNALIESNKWDEAESFFLYFET-----MGLS 146
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
NL ++N++ C + +F A E+ M E SPD S+ LI+ L KNG +++A +L
Sbjct: 147 PNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKL 206
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD-SGLRPNLAVYNRLVGKLV 240
+ EM ++GV PD Y +L+D F+ + + + + +++ + PN+ YN ++ L
Sbjct: 207 FDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLC 266
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G DE+ + M K + D +Y ++ L G LD + + ++G
Sbjct: 267 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 326
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAA----EAAKRSARAAIASLI 355
+ G L + GR EE ++L + E+E E AK +I L+
Sbjct: 327 VYNTMLNGYL-RAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELL 385
Query: 356 PSK--------FGDKVGGTEMADNANANEAASVAE 382
P K +G V G + N N+A S+ E
Sbjct: 386 PEKDCCADSMTYGVLVHG--LCKNGYLNKALSILE 418
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 9/248 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G + D ++E L EK +D + YG L+ G G +A+
Sbjct: 360 VSYNILIRGLFENAKVDEAISIWELLPEK--DCCADSMTYGVLVHGLCKNGYLNKALSIL 417
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
EA EN + A +S+++ LC G+ DE + D+M P N N +
Sbjct: 418 EEA--ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP-----NPHVCNAV 470
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ + +DA+ F M C P +++N LI+ L K +EA L EM KG
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ TY LLM+ + ++D + + ++ G +P++ ++N ++ L G +++A
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590
Query: 251 FFDIMVKK 258
+ M ++
Sbjct: 591 LYSEMKQR 598
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 118/239 (49%), Gaps = 7/239 (2%)
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF- 147
+++++L NG +ALKLFD M P + + ++ +N++ DG+ +G +A E++
Sbjct: 189 TLINSLAKNGYMSDALKLFDEM-----PERGVTPDVACYNILIDGFFKKGDILNASEIWE 243
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
R + P+ S+N +I+ LCK G E+ E++ M D YTY L+
Sbjct: 244 RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGS 303
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
+D +++M ++G+ P++ VYN ++ ++ G ++E + +M K+ SY
Sbjct: 304 GNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYN 363
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
+++ L + K+DE + I + + S V G L K G + + ++E+ E
Sbjct: 364 ILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHG-LCKNGYLNKALSILEEAE 421
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 154/367 (41%), Gaps = 49/367 (13%)
Query: 2 FVKGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
+KG P + SY ++ G + G D F ++ +K+ G D Y +L+ G
Sbjct: 245 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG--QDLYTYSTLIHGLCG 302
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G + A Y E + EN V V N++L+ G+ +E L+L+ M+ E R
Sbjct: 303 SGNLDGATRVYKE-MAENG-VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC---R 357
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA- 178
V S+N++ G + +AI ++ + E C D++++ L+ LCKNG L +A
Sbjct: 358 TVV---SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKAL 414
Query: 179 -------------------------------EELYG---EMSDKGVNPDEYTYGLLMDAC 204
+E+ G +M+ G P+ + +++
Sbjct: 415 SILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGF 474
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
++++D +F MV G P + YN L+ L + EA + M+ K K +
Sbjct: 475 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNM 534
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+Y +M L G KLD L + L+ G + ++ + L G+ E+ ++L
Sbjct: 535 ITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKPDVKMHNIIIHGLCSSGKVEDALQLYS 593
Query: 324 KKEREKA 330
+ ++ K
Sbjct: 594 EMKQRKC 600
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 9/245 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G +P V + ++ GFVR + R F + K G V Y +L+ G
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK--GCFPTVVTYNTLINGLSKA 512
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA E + + K + + + +++ LC K D AL L+ + + P
Sbjct: 513 ERFSEAYALVKEML--HKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKP--- 567
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ N++ G C G+ +DA++++ +M + +C P+ ++ N L++ K A +
Sbjct: 568 --DVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK 625
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ + G PD +Y + + +R+ D + VD G+ P +N LV ++
Sbjct: 626 IWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVL 685
Query: 241 QVGML 245
G L
Sbjct: 686 DNGAL 690
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 126/272 (46%), Gaps = 10/272 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D YS ++ G R+G D V + +++ + G + V +++ G+ E+A+
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKH--GCKPNPHVCNAVINGFVRASKLEDALR 485
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ V + + V N++++ L +F EA L M ++ P N+ +++
Sbjct: 486 FFGNMVSKGCFP--TVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKP-----NMITYS 538
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
++ +G C + A+ ++ + E PD N +I LC +G + +A +LY EM +
Sbjct: 539 LLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 598
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
P+ T+ LM+ ++V + + + ++ G +P++ YN + L + +A
Sbjct: 599 KCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDA 658
Query: 249 KSFFDIMVKKLKMDDA-SYKFMMKALSDGGKL 279
F + V + + A ++ +++A+ D G L
Sbjct: 659 VGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 10/267 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++G+ +F+ + + G+ V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHXFCKEGEIRLAQSVFDSITK--WGLRPSVVSFNTLMNGYIKIGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++V + S V + +++ LC K D+A +LFD M B P N
Sbjct: 189 EGFRL--KSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVP-----NX 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++R+M PD +++N LI LCK G L +A +L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMM 270
+D K +++ LK + +Y ++
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMII 388
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 114/239 (47%), Gaps = 9/239 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V ++ LM G+++ GD D FRL ++ GV D Y L+ G + +
Sbjct: 166 GLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQA--SGVHPDVYTYSVLINGLCKESKMD 223
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E ++E + B+ + + V +++D C NG+ D A++++ +M ++ P +L
Sbjct: 224 DANELFDEML--BNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLP-----DL 276
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C +G K A ++ +M PD +++ LID CK G L A E
Sbjct: 277 ITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKR 336
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + + D+ Y L+ + R D R+M+ GL+P + Y ++ + + G
Sbjct: 337 MIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKG 395
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 109/231 (47%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V + V + +L+ G+
Sbjct: 197 MQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLB--NGLVPNXVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYRQMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G PN+
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +I+ L K Y E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESL 128
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP++ +N L+ +++G LD
Sbjct: 129 ECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLD 188
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E +M + D +Y ++ L K+D+ E+ +LB+G + +
Sbjct: 189 EGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLI 248
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 249 DGH-CKNGR 256
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 148/334 (44%), Gaps = 47/334 (14%)
Query: 4 KGFVADPVVYSYLMLGFVRD-----------------GDSDGVFRLFEELKEKLGGVVSD 46
+G++ D V Y+ L+ G R G D +FEE+K + G++ +
Sbjct: 39 RGYIPDIVTYNTLIKGLCRVHRISVATCIIIDGLCKVGHEDEAKEIFEEMKAQ--GMIPN 96
Query: 47 GVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKL 106
+ Y SL+ G+ G EE+ +NE V + V+ + V N ++D LC GK EA KL
Sbjct: 97 VISYSSLVHGFCCAGKLEESKRLFNEMV--DQGVQPNLVQFNVLIDILCKEGKVIEAKKL 154
Query: 107 FDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
E + + ++L ++N + DG+C G A ++F M C + +S+ LI
Sbjct: 155 L-----EVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILI 209
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
+ CK + EA LY EM G P+ TY L+ + +V D F M SG+
Sbjct: 210 NGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGIS 269
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ +Y + L + G+L EA F+ + K+D SY ++ L GK+
Sbjct: 270 VDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKV------ 323
Query: 286 VGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
E EF K +LS+EG + VV
Sbjct: 324 -------------EIAWEFFK-QLSQEGLQPNVV 343
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 127/262 (48%), Gaps = 16/262 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + D V Y+ L+ GF + GD +LF + K G + + Y L+ GY
Sbjct: 161 RGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSK--GCEHNEISYTILINGYCKIWKV 218
Query: 64 EEAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
EEAM YNE VG+ +VK + ++L L GK +A KLF MK ++
Sbjct: 219 EEAMNLYNEMPQVGKRPNVKTYS----TLLTGLLQTGKVGDANKLFGVMK-----ASGIS 269
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
V+ + + DG C G +A+E+F ++ Y D S++ LID LCK G + A E
Sbjct: 270 VDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEF 329
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV---DSGLRPNLAVYNRLVGK 238
+ ++S +G+ P+ T +++ V +VD F KM ++G P++ YN L+
Sbjct: 330 FKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRG 389
Query: 239 LVQVGMLDEAKSFFDIMVKKLK 260
+ L+E + M K+++
Sbjct: 390 FCESNKLEEVVNLLHKMFKRMR 411
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 141/325 (43%), Gaps = 48/325 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + + YS L+ GF G + RLF E+ ++ GV + V + L+ +
Sbjct: 88 MKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQ--GVQPNLVQFNVLIDILCKE 145
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + + + + V NS++D C G A KLF M P K
Sbjct: 146 GKVIEAKKLLEVTI--QRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSM-----PSKGC 198
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL--------------- 165
N S+ ++ +GYC + ++A+ ++ +M + P+ +++ L
Sbjct: 199 EHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANK 258
Query: 166 --------------------IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+D LCKNG+L EA EL+ E+ D +Y L+D
Sbjct: 259 LFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLC 318
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK----LKM 261
+ +V+ +F+++ GL+PN+ N ++ +V +D+A F+ M K
Sbjct: 319 KAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTP 378
Query: 262 DDASYKFMMKALSDGGKLDEILEIV 286
D +Y +++ + KL+E++ ++
Sbjct: 379 DIITYNTLLRGFCESNKLEEVVNLL 403
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL-------------- 165
L+ +L + N++A+ C R + + + PD +++N L
Sbjct: 6 LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVAT 65
Query: 166 ---IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
ID LCK G EA+E++ EM +G+ P+ +Y L+ ++++ F +MVD
Sbjct: 66 CIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVD 125
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
G++PNL +N L+ L + G + EAK ++ +++ + +D +Y ++ G L
Sbjct: 126 QGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLS 184
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV----- 210
SPD + N L + LC ++E + +G PD TY L+ V+R+
Sbjct: 7 SPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATC 66
Query: 211 ------------DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
D+ F +M G+ PN+ Y+ LV G L+E+K F+ MV +
Sbjct: 67 IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQ 126
Query: 259 -LKMDDASYKFMMKALSDGGKLDE---ILEIV---GGILD 291
++ + + ++ L GK+ E +LE+ G ILD
Sbjct: 127 GVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILD 166
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 23/159 (14%)
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ--- 241
M G++PD +T +L + +NRV +G ++ G P++ YN L+ L +
Sbjct: 1 MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60
Query: 242 --------------VGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
VG DEAK F+ M + + + SY ++ GKL+E +
Sbjct: 61 ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLF 120
Query: 287 GGILDDGGIEFSEELQEF--VKGELSKEGREEEVVKLME 323
++D G L +F + L KEG+ E KL+E
Sbjct: 121 NEMVDQG---VQPNLVQFNVLIDILCKEGKVIEAKKLLE 156
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 142/298 (47%), Gaps = 14/298 (4%)
Query: 1 MFVK----GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKG 56
+FV+ G D V Y+ L+ G+ + GD + V +L E+++ G +D V Y +L+
Sbjct: 222 LFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRK--SGCAADVVTYNALINC 279
Query: 57 YFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+ G E+A + E + V + V ++ +DA C G EA+KLF +M+
Sbjct: 280 FSKFGRMEKAYSYFGEM--KRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMM 337
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P ++ + DG C GR DAI + +M P+ +++ ++D LCK G +A
Sbjct: 338 PNEF-----TYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVA 392
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EA+ + M GV +E Y L+ F N + +M + G+ ++++Y L+
Sbjct: 393 EADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLI 452
Query: 237 GKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L + +DEAKS M L+ + Y +M AL GK E + ++ ILD G
Sbjct: 453 WGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSG 510
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 47/318 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G V + V Y+ ++ G ++G ++D V L E GGV ++ ++Y +L+ G+
Sbjct: 366 MVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMER-----GGVKANELLYTTLIHGH 420
Query: 58 FMKGMEEEAME------------------------CYNEAVGENSSV---------KMSA 84
FM E A++ C ++ V E S+ + +
Sbjct: 421 FMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNT 480
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
V +++DAL GK EA+ L ++ + P N+ ++ + DG C G +AI
Sbjct: 481 VIYTTIMDALFKAGKESEAVALLHKILDSGFQP-----NVVTYCALIDGLCKAGSISEAI 535
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
F KM E P+ ++ LID CK G L +A L EM DKG++ D+ Y L+D
Sbjct: 536 SHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGY 595
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDD 263
+ + D KM++SGL+ +L Y + + M+ EA+ M+ + D
Sbjct: 596 MKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDK 655
Query: 264 ASYKFMMKALSDGGKLDE 281
Y +++ G ++E
Sbjct: 656 TVYNCLIRKYQKLGNMEE 673
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK---------RLA-- 121
A+G S S V +++L L ++G D+A++ R++ PP RLA
Sbjct: 125 ALGPRRSALPSVV--DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARN 182
Query: 122 ---------------VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
N+ +FN++ D C +G +A +F +M CSPD +++N+LI
Sbjct: 183 RQGGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLI 242
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
D K G L E E+L EM G D TY L++ + R++ +YF +M G+
Sbjct: 243 DGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVV 302
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
N+ ++ V + G++ EA F M V+ + ++ +Y ++ G+LD+ + +
Sbjct: 303 ANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVL 362
Query: 286 VGGILDDGGIEFSEELQEFVKGELSKEGREEE---VVKLMEK 324
+ ++ G + V G L KEG+ E V+ LME+
Sbjct: 363 LDEMVHQGLVPNVVTYTVMVDG-LCKEGKVAEADNVLSLMER 403
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 42/273 (15%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGY--CGQ-------- 137
N V+D LC G+ EA LF RMK P ++ ++N + DGY CG
Sbjct: 204 NIVIDFLCKEGELVEARALFVRMKAMGCSP-----DVVTYNSLIDGYGKCGDLEEVEQLV 258
Query: 138 -------------------------GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
GR + A F +M + ++F+ +D CK
Sbjct: 259 SEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKE 318
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
G++ EA +L+ +M +G+ P+E+TY L+D + R+DD +MV GL PN+ Y
Sbjct: 319 GLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 378
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
+V L + G + EA + +M + +K ++ Y ++ + L+++ +
Sbjct: 379 TVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQ-MK 437
Query: 292 DGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ G+E L + L K+ + +E L+ K
Sbjct: 438 NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHK 470
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 149/342 (43%), Gaps = 52/342 (15%)
Query: 2 FVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEEL-KEKLGGVVSDGVVYGSLMKGYFMK 60
F KG + V ++ L+ G + LF++L +E + D V+YG++M G K
Sbjct: 134 FKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICE--PDEVMYGTVMDGLCKK 191
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A + + E K N V+DA C +G D A L + MK ++ PP +
Sbjct: 192 GHTQKAFDLLR--LMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDII 249
Query: 121 AV------------------------------NLGSFNVMADGYCGQGRFKDAIEVFRKM 150
++ +FN + DG C +G+ +DA E+ M
Sbjct: 250 TYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYM 309
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E P+ +++N ++D C G + A ++ M DKG+ PD +Y L++ E ++
Sbjct: 310 IEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKM 369
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM 270
D FR++ +GL+P++ + L+ L +VG + AK FFD M
Sbjct: 370 DKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFD---------------EM 414
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE 312
+A L ++GG +G +E E + F K E +E
Sbjct: 415 QAAGHIPNLYTHCTLLGGYFKNGLVE--EAMSHFHKLERRRE 454
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 134/275 (48%), Gaps = 10/275 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D +Y+ ++ F +DG DG L E+K+K + D + Y SL+ G E+
Sbjct: 211 PDTCIYNIVIDAFCKDGMLDGATSLLNEMKQK--NIPPDIITYTSLIDGLGKLSQWEKVR 268
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E + N + NSV+D LC GK ++A ++ M + P + ++
Sbjct: 269 TLFLEMIHLN--IYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEI-----TY 321
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
NV+ DGYC +G+ A +F M + PD +S+ LI+ + + +A +L+ E+S
Sbjct: 322 NVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQ 381
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G+ P T +L+ FEV R + +F +M +G PNL + L+G + G+++E
Sbjct: 382 NGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEE 441
Query: 248 AKSFFDIMVKKLKMDDAS-YKFMMKALSDGGKLDE 281
A S F + ++ + + Y ++ L GKLD+
Sbjct: 442 AMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDK 476
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 10/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + + Y+ +M G+ G R+F+ + +K G+ D + Y +L+ GY K
Sbjct: 309 MIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDK--GIEPDIISYTALINGYVEK 366
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++AM+ + E + +N +K S V + +L L G+ + A FD M+ + P
Sbjct: 367 KKMDKAMQLFRE-ISQNG-LKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIP--- 421
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL + + GY G ++A+ F K+ R + + +I+ LCKNG L +A
Sbjct: 422 --NLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHA 479
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ ++ G++PD TY ++ + +D+ RKM D+G P+ YN +V
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFF 539
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
+ + E K+F +I K + A+ + +M +++ L
Sbjct: 540 RSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAEDPSL 579
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 109/224 (48%), Gaps = 9/224 (4%)
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH--NPPKRLAVNLGSFNVM 130
A+ + + V +++ L K +A+ LF ++ E+ P + + + +
Sbjct: 131 AIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVM------YGTV 184
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DG C +G + A ++ R M + PDT +N +ID CK+GML A L EM K +
Sbjct: 185 MDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNI 244
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD TY L+D ++++ + T F +M+ + P++ +N ++ L + G +++A+
Sbjct: 245 PPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEE 304
Query: 251 FFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
M++K ++ ++ +Y +M G++ I ++D G
Sbjct: 305 IMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKG 348
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 82/206 (39%), Gaps = 7/206 (3%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
++ +S N V + N D+A LF +M P + SF+ +
Sbjct: 30 TNTCSISVKGNFGVSNEFENVKCLDDAFSLFRQMVTTKPLPSAV-----SFSKLLKALVH 84
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
+ + +FR++ + R D + + +++ C + KG+ +E T
Sbjct: 85 MKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVT 144
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGL-RPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+ L+ F N+V D F+K+V + P+ +Y ++ L + G +A +M
Sbjct: 145 FTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLM 204
Query: 256 VKKL-KMDDASYKFMMKALSDGGKLD 280
+ + K D Y ++ A G LD
Sbjct: 205 EQGITKPDTCIYNIVIDAFCKDGMLD 230
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/147 (19%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA +FR+M + P +SF+ L+ L + ++ E+ + D + ++
Sbjct: 55 DAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVV 114
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--L 259
++C ++R D G + G+ N + L+ L + +A F +V++
Sbjct: 115 NSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENIC 174
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIV 286
+ D+ Y +M L G + +++
Sbjct: 175 EPDEVMYGTVMDGLCKKGHTQKAFDLL 201
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 163/366 (44%), Gaps = 54/366 (14%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF D Y+ L+ GD DG L E+ VV D Y +++ G + +
Sbjct: 382 KGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRN--NVVLDIHTYTTMIIGLCKEQLV 439
Query: 64 EEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
+EAM+ ++ V G + SV + N ++D L + +EA LF +M+ +NP L
Sbjct: 440 DEAMQVFDGMVEVGCHPSV----MTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLR 495
Query: 122 VNLGSFNV--------MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
+ LG+ V + + C G+ A ++ R + + PD +++N L++ LCK
Sbjct: 496 LTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVR 555
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
L A L+ E+ KG DE TYG L+D+ +R +D T F+ ++ SG P++ +YN
Sbjct: 556 NLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYN 615
Query: 234 RLVGKLVQVGMLDEAKS-FFDIMVKK-----------------------------LKMDD 263
++ L ++ L +A + +FD + +K +K+D
Sbjct: 616 SMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQ 675
Query: 264 -------ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
Y + L G++++ L+I IL++ GI+ + + L EG
Sbjct: 676 EYGSVNSCPYTIWLIGLIQAGRIEDALKIF-HILEESGIDITPACCVHLSKYLCLEGNLG 734
Query: 317 EVVKLM 322
V +M
Sbjct: 735 AAVDVM 740
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 133/310 (42%), Gaps = 46/310 (14%)
Query: 10 PVVYSYLMLGFVRDGDSDGVFRLFEELKE-KLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
P+++S ++ + D+D +++ + + + G+ + +L+ + G EA+E
Sbjct: 103 PLLHSRAVVPILLATDADAA--MYDAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVE 160
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
++ GE + V N + + + G AL L++RM P R ++N
Sbjct: 161 AFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVAAGCLPNR-----ATYN 215
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
V+ G C +G DA+++F +M +P+ + L+ +C G L EAE L M DK
Sbjct: 216 VLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDK 275
Query: 189 GVNPDEYTY-----GL-------------------------------LMDACFEVNRVDD 212
G PDE TY GL L+D F R ++
Sbjct: 276 GCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEE 335
Query: 213 G-ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
G Y + + + P++ +Y ++ + G ++A +FFD M +K D Y ++
Sbjct: 336 GFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLL 395
Query: 271 KALSDGGKLD 280
KAL D G LD
Sbjct: 396 KALCDAGDLD 405
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 135/310 (43%), Gaps = 21/310 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + ++ L+ G L +++K G D V Y + + G
Sbjct: 237 MISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDK--GCPPDEVTYNAFLSGLCKA 294
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+E EA+ + + + ++D L G+++E + + + + + +
Sbjct: 295 GRVDEAIE-RLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQAD----V 349
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ + +M G GR DA F +M E +PDT +N L+ LC G L A
Sbjct: 350 SPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARS 409
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM V D +TY ++ + VD+ F MV+ G P++ YN L+ L
Sbjct: 410 LMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLY 469
Query: 241 QVGMLDEAKSFF--------DIMVKKLKM------DDASYKFMMKALSDGGKLDEILEIV 286
+ L+EA+ F + +L + D + + +++++ G++ + +++
Sbjct: 470 RAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLL 529
Query: 287 GGILDDGGIE 296
GI+D G +
Sbjct: 530 RGIIDSGVVP 539
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 15/220 (6%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
VKGF D + Y L+ +R + LF+++ GG S +Y S+M+
Sbjct: 569 VKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHS-GGTPSMP-IYNSMMRSLCRMQK 626
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDAL---CNNGKFDEALKLFDRMKNEHNPPKR 119
+A+ + + + K + +A + V+ + G EA++ ++ E+
Sbjct: 627 LSQAINLWFDHLPR----KYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYG---- 678
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+VN + + G GR +DA+++F + E +L LC G L A
Sbjct: 679 -SVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAAV 737
Query: 180 ELYGEMSDKGVNPDEYTYG-LLMDACFEVNRVDDGATYFR 218
++ KG Y LL C R D A +R
Sbjct: 738 DVMLYTLKKGFTMRRYVGNRLLCSLCIHHRRKDAQALAWR 777
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 137/301 (45%), Gaps = 12/301 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ VKG + ++ L+ + GD RLFEE+K G D V Y L+
Sbjct: 397 LTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSS--GCTPDEVTYNILIDNLCSS 454
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A++ E E S S V N+++D LC + +EA ++FD+M +
Sbjct: 455 GKLAKALDLLKEM--EVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTG-----I 507
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +FN + DG C R DA E+ +M P+ +++N+++ CK G +++A +
Sbjct: 508 GRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAAD 567
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M+ G D TY L++ + R R M G++P YN ++ L
Sbjct: 568 ILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLF 627
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSD-GGKLDEILEIVGGILDDGGI-EF 297
+ +A S F M + DA +YK + + L GG + E + + + D+G I EF
Sbjct: 628 RGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEF 687
Query: 298 S 298
S
Sbjct: 688 S 688
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 135/290 (46%), Gaps = 10/290 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D YS ++ +G+ + + ++ + G + D + +L+ +
Sbjct: 327 MLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDS--GCLPDTTTFNTLIVALCTE 384
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA++ E + S + N +++ALC G A++LF+ MK+ P +
Sbjct: 385 NQLEEALDLARELTVKGLSPNVYTF--NILINALCKVGDPHLAVRLFEEMKSSGCTPDEV 442
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N++ D C G+ A+++ ++M C T+++N +ID LCK + EAEE
Sbjct: 443 -----TYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEE 497
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M G+ + T+ L+D R+DD A +M+ GL+PN YN ++
Sbjct: 498 VFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYC 557
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
+ G + +A M ++D +Y ++ L + L+++ G+
Sbjct: 558 KQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGM 607
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 142/318 (44%), Gaps = 11/318 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V ++ ++ R + + EE+ V D + +LM+G+ +
Sbjct: 187 MSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSS--CDVAPDETTFTTLMEGFVEE 244
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A+ +A ++V N +++ C G+ +AL + + P R+
Sbjct: 245 GSIEAALRL--KARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRV 302
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+F+ +G C G A++V M + C PD +++ +I+ LC NG L EA+
Sbjct: 303 -----TFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKG 357
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +M D G PD T+ L+ A N++++ R++ GL PN+ +N L+ L
Sbjct: 358 IVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALC 417
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+VG A F+ M D+ +Y ++ L GKL + L+++ + G + +
Sbjct: 418 KVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTV 477
Query: 300 ELQEFVKGELSKEGREEE 317
+ G L K R EE
Sbjct: 478 TYNTIIDG-LCKRRRIEE 494
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 118/290 (40%), Gaps = 45/290 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G L +E++ + G V Y +++ G + E
Sbjct: 436 GCTPDEVTYNILIDNLCSSGKLAKALDLLKEME--VSGCPQSTVTYNTIIDGLCKRRRIE 493
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA E +++ + + + +A+ N+++D LCN + D+A +L D+M +E P +
Sbjct: 494 EAEEVFDQM--DVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNV---- 547
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + YC QG A ++ + M D +++ LI+ LCK A +L
Sbjct: 548 -TYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRG 606
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV----------------------- 221
M KG+ P Y ++ + F N D + FR+M
Sbjct: 607 MRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGG 666
Query: 222 -------------DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
D+G P + + L L+ +GM D +++V+K
Sbjct: 667 PIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEK 716
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 41/231 (17%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
V+A+G + K + +M PD ++FN +ID LC+ A + EMS
Sbjct: 168 LTVLAEG----SKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMS 223
Query: 187 DKGVNPDEYTYGLLMDACFE-----------------------------------VNRVD 211
V PDE T+ LM+ E + RV
Sbjct: 224 SCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVG 283
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
D Y ++ + G P+ ++ V L Q G +D A +M+++ + D +Y ++
Sbjct: 284 DALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVI 343
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
L + G+L+E IV ++D G + + + L E + EE + L
Sbjct: 344 NCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVA-LCTENQLEEALDL 393
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 143/294 (48%), Gaps = 16/294 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M+ +GF D Y L+ ++G +LF+E+ E+ GV D Y L+ G+F K
Sbjct: 175 MWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER--GVTPDVACYNILIDGFFKK 232
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
G A E + E + + SV + + N +++ LC GKFDE+ +++ RM KNE
Sbjct: 233 GDILNASEIW-ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER----- 286
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+L +++ + G CG G A V+++M E SPD + +N +++ + G + E
Sbjct: 287 -GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ M +G +Y +L+ FE +VD+ + + + + + Y LV L
Sbjct: 346 ELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404
Query: 240 VQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
+ G L++A S + + +D +Y M+ L G+LDE V G+LD
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDE----VAGVLDQ 454
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 177/395 (44%), Gaps = 31/395 (7%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ P V+ +++ V R+ E ++ + D V +++K Y M +
Sbjct: 38 GYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPED--VALTVIKAYAKNSMPD 95
Query: 65 EAMECY---NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
+A++ + +E G ++ + NS+L+AL + K+DEA F + L+
Sbjct: 96 QALDIFQRMHEIFGCQPGIR----SYNSLLNALIESNKWDEAESFFLYFET-----MGLS 146
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
NL ++N++ C + +F A E+ M E SPD S+ LI+ L KNG +++A +L
Sbjct: 147 PNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKL 206
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD-SGLRPNLAVYNRLVGKLV 240
+ EM ++GV PD Y +L+D F+ + + + + +++ + PN+ YN ++ L
Sbjct: 207 FDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLC 266
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G DE+ + M K + D +Y ++ L G LD + + ++G
Sbjct: 267 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 326
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAA----EAAKRSARAAIASLI 355
+ G L + GR EE ++L + E+E E AK +I L+
Sbjct: 327 VYNTMLNGYL-RAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELL 385
Query: 356 PSK--------FGDKVGGTEMADNANANEAASVAE 382
P K +G V G + N N+A S+ E
Sbjct: 386 PEKDCCADSMTYGVLVHG--LCKNGYLNKALSILE 418
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 9/248 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G + D ++E L EK +D + YG L+ G G +A+
Sbjct: 360 VSYNILIRGLFENAKVDEAISIWELLPEK--DCCADSMTYGVLVHGLCKNGYLNKALSIL 417
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
EA EN + A +S+++ LC G+ DE + D+M P N N +
Sbjct: 418 EEA--ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP-----NPHVCNAV 470
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ + +DA+ F M C P +++N LI+ L K +EA L EM KG
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ TY LLM+ + ++D + + ++ G +P++ ++N ++ L G +++A
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590
Query: 251 FFDIMVKK 258
+ M ++
Sbjct: 591 LYSEMKQR 598
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 118/239 (49%), Gaps = 7/239 (2%)
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF- 147
+++++L NG +ALKLFD M P + + ++ +N++ DG+ +G +A E++
Sbjct: 189 TLINSLAKNGYMSDALKLFDEM-----PERGVTPDVACYNILIDGFFKKGDILNASEIWE 243
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
R + P+ S+N +I+ LCK G E+ E++ M D YTY L+
Sbjct: 244 RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGS 303
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
+D +++M ++G+ P++ VYN ++ ++ G ++E + +M K+ SY
Sbjct: 304 GNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYN 363
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
+++ L + K+DE + I + + S V G L K G + + ++E+ E
Sbjct: 364 ILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHG-LCKNGYLNKALSILEEAE 421
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 153/367 (41%), Gaps = 49/367 (13%)
Query: 2 FVKGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
+KG P + SY ++ G + G D F ++ +K+ G D Y +L+ G
Sbjct: 245 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG--QDLYTYSTLIHGLCG 302
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G + A Y E + EN V V N++L+ G+ +E L+L+ M+ E R
Sbjct: 303 SGNLDGATRVYKE-MAENG-VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC---R 357
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG------ 173
V S+N++ G + +AI ++ + E C D++++ L+ LCKNG
Sbjct: 358 TVV---SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKAL 414
Query: 174 -MLAEAEELYG----------------------------EMSDKGVNPDEYTYGLLMDAC 204
+L EAE G +M+ G P+ + +++
Sbjct: 415 SILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGF 474
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
++++D +F MV G P + YN L+ L + EA + M+ K K +
Sbjct: 475 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNM 534
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+Y +M L G KLD L + L+ G + ++ + L G+ E+ ++L
Sbjct: 535 ITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKPDVKMHNIIIHGLCSSGKVEDALQLYS 593
Query: 324 KKEREKA 330
+ ++ K
Sbjct: 594 EMKQRKC 600
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ L F ++GD +F+ + + G+ V Y +LM GY G +
Sbjct: 137 GYPASLYFFNILXHRFCKEGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + ++ S V + +++ LC K D A +LFD M K L N
Sbjct: 195 EGFKL--KSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEML-----VKGLVPNG 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCK G L +A +L E
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 308 MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ + G
Sbjct: 368 SVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKG 401
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+V +GV + +L+ G+
Sbjct: 203 MHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVK--GLVPNGVTFTTLIDGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G ++A L D M + P ++
Sbjct: 261 GRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKI 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 319 -----TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 374 MMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLM 429
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 95/252 (37%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ +C + F EA L + + AV +
Sbjct: 12 NSTFRHTLXSYCTMIHFVCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGNQRSD 71
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DA+E +R E++ + +++ L K Y
Sbjct: 72 IYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLKYFKLVWGFYE 131
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +L + + + F + GLRP++ YN L+ +++G
Sbjct: 132 EFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M + D +Y ++ L K+D E+ +L G +
Sbjct: 192 DLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFT 251
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 252 TLIDGH-CKNGR 262
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 143/305 (46%), Gaps = 35/305 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD VY+ ++ + G++ F LF+EL EK G+V++ YG+L+ G
Sbjct: 27 MCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEK--GLVANVHTYGALIDGVCKA 84
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKL--------FD---- 108
G E A NE + + ++ + N+++D C G DEA K+ F+
Sbjct: 85 GEMEAAEILVNEM--QTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIY 142
Query: 109 ---------RMKNEHNPPKRLAV---------NLGSFNVMADGYCGQGRFKDAIEVFRKM 150
R N+ KR + N+ S+ + D YC +G F +A ++F++M
Sbjct: 143 TLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEM 202
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+ P+ +++N LID K G + EA EL EM KG+ PD YTY L+ ++
Sbjct: 203 KKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKL 262
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
DD F ++ GL N+ Y ++ L + G +EA +D M + L DD Y +
Sbjct: 263 DDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSL 322
Query: 270 MKALS 274
+ +L
Sbjct: 323 VSSLH 327
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 118/303 (38%), Gaps = 77/303 (25%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
++D ++GK DE ++F+ M K + ++ + V+ + C G K A +F +
Sbjct: 7 LIDWHGSSGKIDEVERMFEEM-----CEKGIKADIHVYTVVINWNCKIGNTKRAFALFDE 61
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA------ 203
+ E + ++ LID +CK G + AE L EM +G++ ++ Y L+D
Sbjct: 62 LTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGL 121
Query: 204 -------------------CFEVNRVDDG----------ATYFRKMVDSGLRPNLAVYNR 234
+ +N + DG + M++ G+ PN+ Y
Sbjct: 122 IDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTT 181
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEI-------- 285
L+ + G EAK F M K +A +Y ++ S G++ E E+
Sbjct: 182 LIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKG 241
Query: 286 ----------------VGGILDDGGIEFSEELQE-----------FVKGELSKEGREEEV 318
+ G LDD F+E Q+ + G LSKEGR EE
Sbjct: 242 IFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISG-LSKEGRSEEA 300
Query: 319 VKL 321
KL
Sbjct: 301 FKL 303
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V + V Y+ L+ + ++G+ +LF+E+K K GG + V Y L+ G+ K
Sbjct: 167 MIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMK-KAGGE-PNAVTYNVLIDGHSKK 224
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA E +E + + S+L C GK D+A++LF+ ++ K L
Sbjct: 225 GRMKEAYELRDEMRAK--GIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQ-----KGL 277
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCK 171
+N+ ++ + G +GR ++A +++ +M E +PD + +L+ L K
Sbjct: 278 PLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHK 328
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ ++ D + G+ + +F +M E D + +I+ CK G A L+
Sbjct: 1 VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+++KG+ + +TYG L+D + ++ +M GL N +YN L+ + G
Sbjct: 61 ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG 276
++DEA IM KK +D + + ++DG
Sbjct: 121 LIDEAFKVQVIMEKKGFENDI---YTLNTIADG 150
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 150/318 (47%), Gaps = 12/318 (3%)
Query: 9 DPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+P +Y+Y LM G V D R+FE ++ G + D V Y +++KGY G ++A
Sbjct: 219 EPTLYTYNFLMNGLVSAMFVDSAERVFEVMES--GRIKPDVVTYNTMIKGYCKAGQTQKA 276
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+E V E ++ + +++ A + F + L+ M K L V +
Sbjct: 277 LE--KLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDE-----KGLQVPPHA 329
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+++ G C +G+ + VF M P+ + LID K G + +A L M
Sbjct: 330 FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMI 389
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
D+G NPD TY ++++ + RV++ YF+ +GL N Y+ L+ L + G +D
Sbjct: 390 DEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVD 449
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
EA+ F+ M +K D Y ++ A + GK+DE L + + ++ G + + +
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTIL 509
Query: 306 KGELSKEGREEEVVKLME 323
+ KE R EE +KL +
Sbjct: 510 ISGMFKEHRNEEALKLWD 527
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 11/323 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG P +S ++ G ++G + + +FE + K G + +Y L+ GY G
Sbjct: 321 KGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRK--GSKPNVAIYTVLIDGYAKTGSV 378
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A+ + + E V + V++ LC NG+ +EA+ F + LA+N
Sbjct: 379 EDAIRLLHRMIDEG--FNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNG-----LAIN 431
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ + DG GR +A +F +M E C+ D+ +N LID K+G + EA L+
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFK 491
Query: 184 EMSDK-GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M ++ G + YTY +L+ F+ +R ++ + M+D G+ P A L L
Sbjct: 492 RMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLS 551
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
G + A D + + DA+ + M+ L G++ E ++ GI + G E ++
Sbjct: 552 GKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGR-EVPGRIR 610
Query: 303 EFVKGELSKEGREEEVVKLMEKK 325
+ L K G+ + +KLM K
Sbjct: 611 TVMINALRKVGKADLAMKLMHSK 633
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 127/273 (46%), Gaps = 9/273 (3%)
Query: 52 SLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK 111
SL+K + GM EE + + + + + ++ + N +++ L + D A ++F+ M+
Sbjct: 192 SLIKSFGKLGMVEELLWVWRKM--KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVME 249
Query: 112 NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCK 171
+ R+ ++ ++N M GYC G+ + A+E R M D +++ +I
Sbjct: 250 S-----GRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYA 304
Query: 172 NGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ + LY EM +KG+ + + L++ + ++++G F M+ G +PN+A+
Sbjct: 305 DSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAI 364
Query: 232 YNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
Y L+ + G +++A M+ + D +Y ++ L G+++E ++
Sbjct: 365 YTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCR 424
Query: 291 DDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+G S + G L K GR +E +L E
Sbjct: 425 FNGLAINSMFYSSLIDG-LGKAGRVDEAERLFE 456
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 3/163 (1%)
Query: 157 PDTLSF-NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
P T+S N+LI K GM+ E ++ +M + G+ P YTY LM+ VD
Sbjct: 184 PMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 243
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALS 274
F M ++P++ YN ++ + G +A +M K L+ D +Y M++A
Sbjct: 244 VFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACY 303
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+ + +D+ G++ V G L KEG+ E
Sbjct: 304 ADSDFSSCVALYQE-MDEKGLQVPPHAFSLVIGGLCKEGKLNE 345
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 120/239 (50%), Gaps = 10/239 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D +Y+ LM G + G LF E+ ++ ++ D VY +L+ G+ G
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR--SILPDAYVYATLIDGFIRSGDF 501
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + + +V VK+ V +N+++ C +G DEAL +RM EH P +
Sbjct: 502 DEARKVFTLSV--EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKF--- 556
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++ + DGY Q AI++FR M + +C P+ +++ +LI+ C G + AEE +
Sbjct: 557 --TYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFK 614
Query: 184 EMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
EM + + P+ TY L+ + E + ++ Y+ M+ + PN +N L+ V+
Sbjct: 615 EMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 144/329 (43%), Gaps = 29/329 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + D VY+ L+ GF+R GD D ++F EK GV D V + +++KG+
Sbjct: 476 MLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEK--GVKVDVVHHNAMIKGFCRS 533
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
GM +EA+ C N E+ + ++++D A+K+F M KN+ P
Sbjct: 534 GMLDEALACMNRMNEEH--LVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKP--- 588
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ ++ + +G+C QG F A E F++M P+ +++ LI K E
Sbjct: 589 ---NVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKA 645
Query: 180 ELYGE--MSDKGVNPDEYTYGLLMDACF---------EVNRVDDGAT-----YFRKMVDS 223
Y E M++K V P+E T+ L+ E + + G + +F +M
Sbjct: 646 VYYWELMMTNKCV-PNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSD 704
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEI 282
G + A YN ++ L GM+ A D MVKK D S+ ++ G +
Sbjct: 705 GWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQW 764
Query: 283 LEIVGGILDDGGIEFSEELQEFVKGELSK 311
+ LD+ G+E + ++ L K
Sbjct: 765 RNMDFRNLDEKGLEVAVRYSRVLEQHLPK 793
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 10/272 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + + Y+ L+ + + + D +L +L E+ G D V YG L+ G + G
Sbjct: 374 KGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAER--GCKPDIVTYGILIHGLVVSGHM 431
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+ + + + V A N ++ LC G+F A LF M + P
Sbjct: 432 DDAVNMKVKLI--DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYV-- 487
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + DG+ G F +A +VF E D + N +I C++GML EA
Sbjct: 488 ---YATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMN 544
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M+++ + PD++TY ++D + + FR M + +PN+ Y L+ G
Sbjct: 545 RMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQG 604
Query: 244 MLDEA-KSFFDIMVKKLKMDDASYKFMMKALS 274
A ++F ++ + L + +Y ++++ +
Sbjct: 605 DFSLAEETFKEMQSRDLVPNVVTYTTLIRSFA 636
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 130/307 (42%), Gaps = 43/307 (14%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK--------LGGVV---------- 44
+KGF+ + ++ GF + GD RL EE+KE+ L ++
Sbjct: 268 LKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKV 327
Query: 45 ---------------SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNS 89
D Y L+ +G +E A +EA + ++ ++
Sbjct: 328 DPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEA--SKKGLILTNLSYAP 385
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
++ A C + ++D A KL ++ P ++ ++ ++ G G DA+ + K
Sbjct: 386 LIQAYCKSKEYDIASKLLLQLAERGCKP-----DIVTYGILIHGLVVSGHMDDAVNMKVK 440
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
+ + SPD +N L+ LCK G A+ L+ EM D+ + PD Y Y L+D
Sbjct: 441 LIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGD 500
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
D+ F V+ G++ ++ +N ++ + GMLDEA + + M ++ + D KF
Sbjct: 501 FDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPD---KFT 557
Query: 270 MKALSDG 276
+ DG
Sbjct: 558 YSTIIDG 564
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 111/276 (40%), Gaps = 43/276 (15%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G V + V Y +++ GY G E A + E + + ++++ C G F
Sbjct: 235 GCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFG--TMINGFCKKGDFV 292
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+ +L + +K + L V + N + D G D E R + C PD +
Sbjct: 293 ASDRLLEEVKE-----RGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIAT 347
Query: 162 FNNLIDQLCKN-------GMLAE----------------------------AEELYGEMS 186
+N LI++LCK G+L E A +L +++
Sbjct: 348 YNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLA 407
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
++G PD TYG+L+ +DD K++D G+ P+ A+YN L+ L + G
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 247 EAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDE 281
AK F M+ + + DA Y ++ G DE
Sbjct: 468 PAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDE 503
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 122/292 (41%), Gaps = 49/292 (16%)
Query: 31 RLFEELKEKLGGVVSDGV-----VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAV 85
R+F E+++ LG + ++ V ++ Y G +A+E Y+ V SV +
Sbjct: 113 RIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVELYDSVP-DVI 171
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKN------------------------------EHN 115
A N++L + + + ++A K++D M E
Sbjct: 172 ACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDR 231
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
K N+ +N + GYC G ++A VF+++ P +F +I+ CK G
Sbjct: 232 WGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDF 291
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
++ L E+ ++G+ + ++DA + D A R +V + +P++A YN L
Sbjct: 292 VASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNIL 351
Query: 236 VGKL-------VQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLD 280
+ +L V G+LDEA K L + + SY +++A + D
Sbjct: 352 INRLCKEGKKEVAAGLLDEASK------KGLILTNLSYAPLIQAYCKSKEYD 397
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 44/255 (17%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP-PKRLAVNL---------- 124
N +VK++ A + VL A +G +A++++D + ++ P +A N
Sbjct: 126 RNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRR 185
Query: 125 --------------------GSFNVMADGYCGQGRFKDAIEVFRKMGEYR----CSPDTL 160
S +M G C +G+ ++ RK+ E R C P+ +
Sbjct: 186 LEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEG----RKLIEDRWGKGCVPNIV 241
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+N +I CK G + A+ ++ E+ KG P T+G +++ + ++
Sbjct: 242 FYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEV 301
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGM-LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKL 279
+ GLR + N ++ + G +D A+S I+ K D A+Y ++ L GK
Sbjct: 302 KERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGK- 360
Query: 280 DEILEIVGGILDDGG 294
E+ G+LD+
Sbjct: 361 ---KEVAAGLLDEAS 372
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 151/323 (46%), Gaps = 11/323 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG P +S ++ G ++G + + +FE + K G + +Y L+ GY G
Sbjct: 303 KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK--GSKPNVAIYTVLIDGYAKSGSV 360
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A+ + + E K V + V++ LC NG+ +EAL F + + LA+N
Sbjct: 361 EDAIRLLHRMIDEG--FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG-----LAIN 413
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ + DG GR +A +F +M E C+ D+ +N LID K+ + EA L+
Sbjct: 414 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 473
Query: 184 EMSDK-GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M ++ G + YTY +L+ F+ +R ++ + M+D G+ P A + L L
Sbjct: 474 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLS 533
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
G + A D + + DA+ + M+ L G++ E ++ GI + G E ++
Sbjct: 534 GKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGR-EVPGRIR 592
Query: 303 EFVKGELSKEGREEEVVKLMEKK 325
+ L K G+ + +KLM K
Sbjct: 593 TVMINALRKVGKADLAMKLMHSK 615
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 146/320 (45%), Gaps = 16/320 (5%)
Query: 9 DPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+P +Y+Y LM G V D R+FE ++ G + D V Y +++KGY G ++A
Sbjct: 201 EPTLYTYNFLMNGLVSAMFVDSAERVFEVMES--GRIKPDIVTYNTMIKGYCKAGQTQKA 258
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM--KNEHNPPKRLAVNL 124
ME + E + + +++ A + F + L+ M K PP
Sbjct: 259 MEKLRDM--ETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPH------ 310
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F+++ G C +G+ + VF M P+ + LID K+G + +A L
Sbjct: 311 -AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 369
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M D+G PD TY ++++ + RV++ YF GL N Y+ L+ L + G
Sbjct: 370 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 429
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+DEA+ F+ M +K D Y ++ A + K+DE + + + ++ G + +
Sbjct: 430 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 489
Query: 304 FVKGELSKEGREEEVVKLME 323
+ + KE R EE +KL +
Sbjct: 490 ILLSGMFKEHRNEEALKLWD 509
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 13/243 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF D V YS ++ G ++G + F + G+ + + Y SL+ G
Sbjct: 370 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC--RFDGLAINSMFYSSLIDGLGKA 427
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA + E + E + + N+++DA + K DEA+ LF RM+ E +
Sbjct: 428 GRVDEAERLFEE-MSEKGCTR-DSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQ-- 483
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ ++ G + R ++A++++ M + +P F L LC +G +A A +
Sbjct: 484 --TVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACK 541
Query: 181 LYGEMSDKGVNPDEYTYGLLMDAC-----FEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+ E++ GV D ++ C E ++ DG T + V +R + R
Sbjct: 542 ILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRK 601
Query: 236 VGK 238
VGK
Sbjct: 602 VGK 604
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 9/177 (5%)
Query: 157 PDTLSFNN-LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
P T+S N LI K GM+ E ++ +M + G+ P YTY LM+ VD
Sbjct: 166 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 225
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKAL- 273
F M ++P++ YN ++ + G +A + D+ + + D +Y M++A
Sbjct: 226 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 285
Query: 274 --SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
SD G + + +D+ GI+ V G L KEG+ E + E R+
Sbjct: 286 ADSDFGSCVALYQ----EMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 338
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/238 (18%), Positives = 98/238 (41%), Gaps = 41/238 (17%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ + + N + + G ++ + V+RKM E P ++N L++ L + AE
Sbjct: 165 FPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAE 224
Query: 180 ELYGEMSDKGVNPDEYTYG-----------------------------------LLMDAC 204
++ M + PD TY ++ AC
Sbjct: 225 RVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC 284
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
+ + +++M + G++ ++ ++G L + G L+E + F+ M++K K +
Sbjct: 285 YADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 344
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKGELSKEGREEEVV 319
A Y ++ + G +++ + ++ ++D+G F ++ + V L K GR EE +
Sbjct: 345 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEG---FKPDVVTYSVVVNGLCKNGRVEEAL 399
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 158/349 (45%), Gaps = 19/349 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G A+ +Y+ ++ GF + G F L++ K KL GV+ + Y SL+ Y G
Sbjct: 172 GLAANQYIYTIMINGFFKKGYKKDGFELYQ--KMKLVGVLPNLYTYNSLITEYCRDGKLS 229
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH-NPPKRLAVN 123
A + ++E V +AV N ++ LC G+ +A L +RMK H NP R
Sbjct: 230 LAFKVFDEI--SKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTR---- 283
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+FN++ DG C G+ A+ K+ P +++N LI K G + EL
Sbjct: 284 --TFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVR 341
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM D+G++P + TY +LM+ + ++ F M GL P+ Y L+ L G
Sbjct: 342 EMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKG 401
Query: 244 MLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+ EA + MV+ L+ +D Y M+ + L+ + ++ +G + +
Sbjct: 402 NMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNG---VTPNVA 458
Query: 303 EFVKG--ELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARA 349
++ L K+G+ E +L+ KE +A K E+ ++ + + A
Sbjct: 459 SYISTIQILCKDGKSIEAKRLL--KEMTEAGLKPPESLCSKVGQAKSCA 505
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+++A C NG D+A +F RM + LA N + +M +G+ +G KD E+++K
Sbjct: 148 LIEACCRNGDIDQAKVMFSRMDDLG-----LAANQYIYTIMINGFFKKGYKKDGFELYQK 202
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M P+ ++N+LI + C++G L+ A +++ E+S +GV + TY +L+ +
Sbjct: 203 MKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQ 262
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM-----DDA 264
V +M + + P +N L+ L G LD+A S+ + KLK+
Sbjct: 263 VSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLE----KLKLIGLCPTLV 318
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVKGE 308
+Y ++ S G + E+V + D G + ++ + FV+ +
Sbjct: 319 TYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSD 366
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 44/239 (18%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + +Y+ L+ R+GD D +F + + G+ ++ +Y ++ G+F KG ++
Sbjct: 137 GVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDL--GLAANQYIYTIMINGFFKKGYKK 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ E L+ +MK P NL
Sbjct: 195 DGFE-------------------------------------LYQKMKLVGVLP-----NL 212
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + YC G+ A +VF ++ + + + +++N LI LC+ G +++AE L
Sbjct: 213 YTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLER 272
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +NP T+ +LMD ++D +Y K+ GL P L YN L+ +VG
Sbjct: 273 MKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVG 331
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 7/200 (3%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S+ + N+ LD L +G D F R ++ SF + +C G
Sbjct: 72 SSFSFNNALDLLAKSGNLDRTWGFFTEYLG------RTQFDVYSFWITIKAFCENGNVSK 125
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
E+ +M SP+ + LI+ C+NG + +A+ ++ M D G+ ++Y Y ++++
Sbjct: 126 GFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMIN 185
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
F+ DG ++KM G+ PNL YN L+ + + G L A FD + K+ +
Sbjct: 186 GFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVAC 245
Query: 262 DDASYKFMMKALSDGGKLDE 281
+ +Y ++ L G++ +
Sbjct: 246 NAVTYNILIGGLCRKGQVSK 265
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 76/191 (39%), Gaps = 44/191 (23%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V Y+ LM FVR D + + +F +K G+V D YG L+ G
Sbjct: 346 RGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRI--GLVPDQHTYGVLIHG------- 396
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
LC G EA KL+ M H P +
Sbjct: 397 ------------------------------LCIKGNMVEASKLYKSMVEMHLQPNDVI-- 424
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+N M +GYC + A++ +M + +P+ S+ + I LCK+G EA+ L
Sbjct: 425 ---YNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLK 481
Query: 184 EMSDKGVNPDE 194
EM++ G+ P E
Sbjct: 482 EMTEAGLKPPE 492
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 100/259 (38%), Gaps = 56/259 (21%)
Query: 128 NVMADGYCGQGR------------FKDAIEVFRKMGEYRCSPDTLSFNNLIDQL------ 169
N+ ++ CG+ R + +++ F+ M SP + SFNN +D L
Sbjct: 30 NLNSESVCGRPRDAVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNL 89
Query: 170 ----------------------------CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
C+NG +++ EL +M GV+P+ + Y +L+
Sbjct: 90 DRTWGFFTEYLGRTQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILI 149
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
+AC +D F +M D GL N +Y ++ + G + + +K+K+
Sbjct: 150 EACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELY----QKMKL 205
Query: 262 -----DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
+ +Y ++ GKL ++ I G+ + + G L ++G+
Sbjct: 206 VGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEI-SKRGVACNAVTYNILIGGLCRKGQVS 264
Query: 317 EVVKLMEKKEREKAEAKAR 335
+ L+E+ +R R
Sbjct: 265 KAEGLLERMKRAHINPTTR 283
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 7/247 (2%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
V +GSL+ G+ ++ +A V S + + V N+++D LC NG + AL+L
Sbjct: 136 VTFGSLLHGFCLRNRIHDAFSLVASMV--KSGYEPNVVVYNTLIDCLCKNGDVNIALELL 193
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
+ M+ + RLA +L ++N + G C G ++ A + R M + R +PD +F LID
Sbjct: 194 NEMEKK----GRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALID 249
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
K G L EA+ELY +M + P+ TY L++ R+ F M G P
Sbjct: 250 AFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFP 309
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
N+ YN L+ + +++ F M ++ L D +Y ++ GKL +I
Sbjct: 310 NVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIF 369
Query: 287 GGILDDG 293
++ G
Sbjct: 370 SWMVSCG 376
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 135/278 (48%), Gaps = 10/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V+Y+ ++ G ++ D + +F +++K G+V+D V Y +L+ G G
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKK--GIVADAVTYNTLISGLCNSGRWT 772
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + V + + + +++D G EA L+ M P N+
Sbjct: 773 DAARLLRDMV--KRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHP-----NI 825
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G+C QGR DA +F M C PD +++N LI CK+ + + +L+ E
Sbjct: 826 LTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 885
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ +G+ D +TY L+ + +++ F +MVD G+ P++ YN L+ L G
Sbjct: 886 MTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGK 945
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+++A D+ ++ +D +Y +++ + K+ E
Sbjct: 946 IEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKE 983
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 130/275 (47%), Gaps = 10/275 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG VAD V Y+ L+ G G RL ++ ++ + + + + +L+ + +G
Sbjct: 749 KGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKR--KIDPNVIFFTALIDTFVKEGNL 806
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA Y E + SV + + NS+++ C G+ +A +FD M ++ P +
Sbjct: 807 LEAKNLYKEMI--RRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFP-----D 859
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + G+C R +D +++F +M D ++N LI C+ G L A++++
Sbjct: 860 VVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 919
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M D GV PD TY +L+D +++ + + + ++ YN ++ + +
Sbjct: 920 RMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRND 979
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
+ EA F + +K +K+D +Y M+ L G
Sbjct: 980 KVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 146/342 (42%), Gaps = 10/342 (2%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G+ + VVY+ L+ ++GD + L E+ EK G + +D V Y +L+ G
Sbjct: 161 MVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEM-EKKGRLAADLVTYNTLLTGLCYS 219
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + + +++DA G DEA +L+ +M P
Sbjct: 220 GEWRQAARILRDMTKRR--INPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGP--- 274
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++N + +G C GR A + F M C P+ +++N LI+ CK+ + + +
Sbjct: 275 --NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMK 332
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M +G+ D +TY L+ +V ++ F MV G+ P++ + L+ L
Sbjct: 333 LFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLC 392
Query: 241 QVGMLDEAKSFFDIMVKKLK-MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
G + A F+ M K + +Y M+ L K++E E+ + +G +
Sbjct: 393 VNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDAR 452
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAE 341
+ G L K G E +L + + + +A + E
Sbjct: 453 TYTIMILG-LCKNGPRREADELFRRMKEDGIICQAEDGHLGE 493
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V Y+ L+ GF + + +LF E+ + G+V D Y +L+ GY
Sbjct: 851 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQ--GLVGDAFTYNTLIHGYCQA 908
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKR 119
G A + +N V + V V N +LD LCNNGK ++AL + D KN+
Sbjct: 909 GKLNVAQKVFNRMV--DCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQ------ 960
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ V++ ++N++ G C + K+A +FR + D +++ +I LC+NG+ EA+
Sbjct: 961 MDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREAD 1020
Query: 180 ELYGEMSDKGVNPDEYTY 197
+L M + G P E Y
Sbjct: 1021 KLCTRMKEDGFMPSERIY 1038
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 6/205 (2%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
EN + + ++ C +F AL L +M P V LGS + +G+C
Sbjct: 642 ENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPS--IVTLGS---LLNGFC 696
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
RF++A+ + M E P+ + +N +I+ LCKN L A E++ M KG+ D
Sbjct: 697 QGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAV 756
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
TY L+ R D A R MV + PN+ + L+ V+ G L EAK+ + M
Sbjct: 757 TYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEM 816
Query: 256 VKK-LKMDDASYKFMMKALSDGGKL 279
+++ + + +Y ++ G+L
Sbjct: 817 IRRSVHPNILTYNSLINGFCIQGRL 841
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 10/213 (4%)
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
KFD+A LF M P ++ F + +F I +F KM S D
Sbjct: 595 KFDDAFGLFCEMLQSRPIP-----SIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHD 649
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
SF LI C+ + A L G+M G P T G L++ + NR + +
Sbjct: 650 LYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVD 709
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
M + GL PN+ +YN ++ L + L+ A F M KK + D +Y ++ L + G
Sbjct: 710 SMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSG 769
Query: 278 KLDE----ILEIVGGILDDGGIEFSEELQEFVK 306
+ + + ++V +D I F+ + FVK
Sbjct: 770 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 802
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 7/190 (3%)
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
+F++AL LF M P ++ F + R++ I ++M + S D
Sbjct: 45 RFEDALDLFLEMVQSQPLP-----SVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHD 99
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
SF LI C+ L+ A + G+M G +P T+G L+ NR+ D +
Sbjct: 100 LYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVA 159
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMMKALSDG 276
MV SG PN+ VYN L+ L + G ++ A + M KK L D +Y ++ L
Sbjct: 160 SMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYS 219
Query: 277 GKLDEILEIV 286
G+ + I+
Sbjct: 220 GEWRQAARIL 229
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM GFV++G+ +F+ + + G+ V + +LM GY G
Sbjct: 131 GYPASLYFFNILMHGFVKEGEIRLAQSVFDAITK--WGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A LFD M + K L N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLD-----KGLVPNG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ +K G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDK--GLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G +P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 104/263 (39%), Gaps = 49/263 (18%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFR--KMGEYRCSPDTLS-------------------- 161
+ F+ + Y G +DAIE +R K ++R DT
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 162 -------------FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
FN L+ K G + A+ ++ ++ G+ P ++ LM+ ++
Sbjct: 126 ENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
+++G M SG++P++ Y+ L+ L + +D+A FD M+ K L + ++
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFT 245
Query: 268 FMMKALSDGGKLDEILEIVGGIL 290
++ G++D +EI +L
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQML 268
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 138/282 (48%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G A+ ++Y+ L+ G + +S+ L E+K K G+ D +YG+L++G +
Sbjct: 393 GVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK--GLELDISLYGALIQGLCNVHKLD 450
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + + S ++ + + +++DA +GK EA+ + ++ + P N+
Sbjct: 451 EAKSLLTKM--DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP-----NV 503
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG C G +AI F KM + P+ ++ L+D LCKNG L EA +L+ E
Sbjct: 504 ITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNE 563
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG++ D+ Y L+D + + D KM+DSGL+ +L Y + + M
Sbjct: 564 MVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNM 623
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ EA+ F M+ + D A Y ++ G L+E + +
Sbjct: 624 MPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 141/290 (48%), Gaps = 10/290 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D V ++ L+ G+ + G+ D V +L EE++ G +D V Y +L+ + G E
Sbjct: 218 GCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRR--SGCKADVVTYNALINCFCKFGRME 275
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + A + V + V ++ +DA C G EA+KLF +M+ + +A+N
Sbjct: 276 TAYGYF--AAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR-----VRGMALNE 328
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG C GR DAI + +M + +++ L+D LCK +AEAE++
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M GV +E Y L+ F + +M + GL ++++Y L+ L V
Sbjct: 389 MEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHK 448
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
LDEAKS M + L+ + Y MM A GK+ E + ++ ILD G
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 33/282 (11%)
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--------------- 117
A+G S S V +++L L + G D+A++ R++ PP
Sbjct: 113 ALGPRRSALASVV--DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARD 170
Query: 118 ------KRL-----AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
+RL A N+ +FN++ D C +G +A +F +M E C PD ++FN+LI
Sbjct: 171 RSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLI 230
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
D K G L E E+L EM G D TY L++ + R++ YF M G+
Sbjct: 231 DGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVM 290
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
N+ ++ V + G++ EA F M V+ + +++ +Y ++ G+LD+ + +
Sbjct: 291 ANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVL 350
Query: 286 VGGILDDGGIEFSEELQEFVKGELSKEGR---EEEVVKLMEK 324
+ ++ G V G L KE + E+V+++MEK
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDG-LCKERKVAEAEDVLRMMEK 391
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D VVY+ L+ G+++ G+ F L ++ + G+ D Y + G+
Sbjct: 564 MVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMID--SGLQLDLFCYTCFISGFCNL 621
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK 111
M EA E ++E +G + N ++ G +EA+ L D M+
Sbjct: 622 NMMPEAREVFSEMIGHG--IAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 158/349 (45%), Gaps = 19/349 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G A+ +Y+ ++ GF + G F L++ K KL GV+ + Y SL+ Y G
Sbjct: 172 GLAANQYIYTIMINGFFKKGYKKDGFELYQ--KMKLVGVLPNLYTYNSLITEYCRDGKLS 229
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH-NPPKRLAVN 123
A + ++E V +AV N ++ LC G+ +A L +RMK H NP R
Sbjct: 230 LAFKVFDEI--SKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTR---- 283
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+FN++ DG C G+ A+ K+ P +++N LI K G + EL
Sbjct: 284 --TFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVR 341
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM D+G++P + TY +LM+ + ++ F M GL P+ Y L+ L G
Sbjct: 342 EMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKG 401
Query: 244 MLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+ EA + MV+ L+ +D Y M+ + L+ + ++ +G + +
Sbjct: 402 NMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNG---VTPNVA 458
Query: 303 EFVKG--ELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARA 349
++ L K+G+ E +L+ KE +A K E+ ++ + + A
Sbjct: 459 SYISTIQILCKDGKSIEAKRLL--KEMTEAGLKPPESLCSKVGQAKSCA 505
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 132/296 (44%), Gaps = 23/296 (7%)
Query: 22 RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVK 81
+ G+ D + F E LG D +G +K + G + E + E V
Sbjct: 85 KSGNLDRTWGFFTEY---LGRTQFDVYSFGITIKAFCENGNVSKGFELLAQM--ETMGVS 139
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
+ +++A C NG D+A +F RM + LA N + +M +G+ +G K
Sbjct: 140 PNVFIYTILIEACCRNGDIDQAKVMFSRMDDLG-----LAANQYIYTIMINGFFKKGYKK 194
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
D E+++KM P+ ++N+LI + C++G L+ A +++ E+S +GV + TY +L+
Sbjct: 195 DGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILI 254
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
+V +M + + P +N L+ L G LD+A S+ + KLK+
Sbjct: 255 GGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLE----KLKL 310
Query: 262 -----DDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVKGE 308
+Y ++ S G + E+V + D G + ++ + FV+ +
Sbjct: 311 IGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSD 366
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 14/245 (5%)
Query: 38 EKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNN 97
E + G D V+ S F + E++++ + V + S S+ + N+ LD L +
Sbjct: 34 ESVCGRPRDAVINAS-----FQSQLLEQSLDSFKLMVLKGHSP--SSFSFNNALDLLAKS 86
Query: 98 GKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
G D F R ++ SF + +C G E+ +M SP
Sbjct: 87 GNLDRTWGFFTEYLG------RTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSP 140
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
+ + LI+ C+NG + +A+ ++ M D G+ ++Y Y ++++ F+ DG +
Sbjct: 141 NVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELY 200
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDG 276
+KM G+ PNL YN L+ + + G L A FD + K+ + + +Y ++ L
Sbjct: 201 QKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRK 260
Query: 277 GKLDE 281
G++ +
Sbjct: 261 GQVSK 265
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 44/239 (18%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + +Y+ L+ R+GD D +F + + G+ ++ +Y ++ G+F KG ++
Sbjct: 137 GVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDL--GLAANQYIYTIMINGFFKKGYKK 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ E Y KM V + NL
Sbjct: 195 DGFELYQ---------KMKLVG---------------------------------VLPNL 212
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + YC G+ A +VF ++ + + + +++N LI LC+ G +++AE L
Sbjct: 213 YTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLER 272
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +NP T+ +LMD ++D +Y K+ GL P L YN L+ +VG
Sbjct: 273 MKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVG 331
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 76/191 (39%), Gaps = 44/191 (23%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V Y+ LM FVR D + + +F +K G+V D YG L+ G
Sbjct: 346 RGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRI--GLVPDQHTYGVLIHG------- 396
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
LC G EA KL+ M H P +
Sbjct: 397 ------------------------------LCIKGNMVEASKLYKSMVEMHLQPNDVI-- 424
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+N M +GYC + A++ +M + +P+ S+ + I LCK+G EA+ L
Sbjct: 425 ---YNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLK 481
Query: 184 EMSDKGVNPDE 194
EM++ G+ P E
Sbjct: 482 EMTEAGLKPPE 492
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 151/323 (46%), Gaps = 11/323 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG P +S ++ G ++G + + +FE + K G + +Y L+ GY G
Sbjct: 321 KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK--GSKPNVAIYTVLIDGYAKSGSV 378
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A+ + + E K V + V++ LC NG+ +EAL F + + LA+N
Sbjct: 379 EDAIRLLHRMIDEG--FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG-----LAIN 431
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ + DG GR +A +F +M E C+ D+ +N LID K+ + EA L+
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 184 EMSDK-GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M ++ G + YTY +L+ F+ +R ++ + M+D G+ P A + L L
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLS 551
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
G + A D + + DA+ + M+ L G++ E ++ GI + G E ++
Sbjct: 552 GKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGR-EVPGRIR 610
Query: 303 EFVKGELSKEGREEEVVKLMEKK 325
+ L K G+ + +KLM K
Sbjct: 611 TVMINALRKVGKADLAMKLMHSK 633
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 146/320 (45%), Gaps = 16/320 (5%)
Query: 9 DPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+P +Y+Y LM G V D R+FE ++ G + D V Y +++KGY G ++A
Sbjct: 219 EPTLYTYNFLMNGLVSAMFVDSAERVFEVMES--GRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM--KNEHNPPKRLAVNL 124
ME + E + + +++ A + F + L+ M K PP
Sbjct: 277 MEKLRDM--ETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPH------ 328
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F+++ G C +G+ + VF M P+ + LID K+G + +A L
Sbjct: 329 -AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M D+G PD TY ++++ + RV++ YF GL N Y+ L+ L + G
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+DEA+ F+ M +K D Y ++ A + K+DE + + + ++ G + +
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 507
Query: 304 FVKGELSKEGREEEVVKLME 323
+ + KE R EE +KL +
Sbjct: 508 ILLSGMFKEHRNEEALKLWD 527
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 13/243 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF D V YS ++ G ++G + F + G+ + + Y SL+ G
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC--RFDGLAINSMFYSSLIDGLGKA 445
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA + E + E + + N+++DA + K DEA+ LF RM+ E +
Sbjct: 446 GRVDEAERLFEE-MSEKGCTR-DSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQ-- 501
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ ++ G + R ++A++++ M + +P F L LC +G +A A +
Sbjct: 502 --TVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACK 559
Query: 181 LYGEMSDKGVNPDEYTYGLLMDAC-----FEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+ E++ GV D ++ C E ++ DG T + V +R + R
Sbjct: 560 ILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRK 619
Query: 236 VGK 238
VGK
Sbjct: 620 VGK 622
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 9/177 (5%)
Query: 157 PDTLSFNN-LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
P T+S N LI K GM+ E ++ +M + G+ P YTY LM+ VD
Sbjct: 184 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 243
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKAL- 273
F M ++P++ YN ++ + G +A + D+ + + D +Y M++A
Sbjct: 244 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
Query: 274 --SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
SD G + + +D+ GI+ V G L KEG+ E + E R+
Sbjct: 304 ADSDFGSCVALYQ----EMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 356
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/238 (18%), Positives = 98/238 (41%), Gaps = 41/238 (17%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ + + N + + G ++ + V+RKM E P ++N L++ L + AE
Sbjct: 183 FPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAE 242
Query: 180 ELYGEMSDKGVNPDEYTYG-----------------------------------LLMDAC 204
++ M + PD TY ++ AC
Sbjct: 243 RVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC 302
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
+ + +++M + G++ ++ ++G L + G L+E + F+ M++K K +
Sbjct: 303 YADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 362
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKGELSKEGREEEVV 319
A Y ++ + G +++ + ++ ++D+G F ++ + V L K GR EE +
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEG---FKPDVVTYSVVVNGLCKNGRVEEAL 417
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 135/271 (49%), Gaps = 13/271 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY+Y +++G+ G D + L E K K G + + Y ++ KG EEA+
Sbjct: 341 PCVYAYNTMIMGYGSAGKFDEAYSLLERQKRK--GCIPSVIAYNCILTCLGRKGKVEEAL 398
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
++E + ++++ ++ N ++D LC G+ + ALK+ D MK P N+ +
Sbjct: 399 RIHDE-MRQDAAPNLTTY--NILIDMLCKAGELEAALKVQDTMKEAGLFP-----NIMTV 450
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N+M D C + +A +F + CSPD+ +F +LID L + G + +A LY +M D
Sbjct: 451 NIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLD 510
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
P+ Y L+ F+ R +DG +++MV G P+L + N + + + G +++
Sbjct: 511 SDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEK 570
Query: 248 AKSFF-DIMVKKLKMDDASYKFMMKALSDGG 277
++ F +I + L D SY ++ L G
Sbjct: 571 GRALFEEIKAQGLVPDVRSYSILIHGLVKAG 601
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 10/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D V Y+ L+ + D LFEEL L V Y +++ GY
Sbjct: 299 MKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELD--LNRSVPCVYAYNTMIMGYGSA 356
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA + S +A N +L L GK +EAL++ D M+ + P
Sbjct: 357 GKFDEAYSLLERQ--KRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAP---- 410
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL ++N++ D C G + A++V M E P+ ++ N +ID+LCK L EA
Sbjct: 411 --NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACS 468
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ + K +PD T+ L+D RVDD + + KM+DS PN+ VY L+
Sbjct: 469 IFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFF 528
Query: 241 QVGMLDEAKSFFDIMVKK 258
+ G ++ + MV +
Sbjct: 529 KCGRKEDGHKIYKEMVHR 546
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 140/274 (51%), Gaps = 10/274 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + L+ G R G D + L+E++ + + + VVY SL++ +F G +E+ +
Sbjct: 481 DSRTFCSLIDGLGRRGRVDDAYSLYEKMLD--SDQIPNVVVYTSLIQNFFKCGRKEDGHK 538
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
Y E V S + + NS +D + G+ ++ LF+ +K + P ++ S++
Sbjct: 539 IYKEMVHRGCSPDLMLL--NSYMDCVFKAGEVEKGRALFEEIKAQGLVP-----DVRSYS 591
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
++ G G ++ ++F +M E D L++N +ID CK+G + +A +L EM K
Sbjct: 592 ILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTK 651
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ P TYG ++D +++R+D+ F + G+ N+ +Y+ L+ +VG +DEA
Sbjct: 652 GLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEA 711
Query: 249 KSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
++M K L + ++ ++ AL ++DE
Sbjct: 712 YLILEELMQKGLTPNSYTWNCLLDALVKAEEIDE 745
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 139/280 (49%), Gaps = 18/280 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D YS L+ G V+ G S ++LF E+KE+ G+ D + Y +++ G+ G
Sbjct: 581 QGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQ--GLHLDVLAYNTVIDGFCKSGKV 638
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A + E + ++ + V SV+D L + DEA LF+ K+ + +N
Sbjct: 639 DKAYQLLEEM--KTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKS-----IGVDLN 691
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + DG+ GR +A + ++ + +P++ ++N L+D L K + EA+ +
Sbjct: 692 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQ 751
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + +P+ TY ++++ + + + ++++M GL+PN Y ++ L + G
Sbjct: 752 NMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAG 811
Query: 244 MLDEAKSFFDIMVKKLKM-----DDASYKFMMKALSDGGK 278
+ EA+ FD + K D A Y M++ LS K
Sbjct: 812 NVMEARGLFD----RFKASGGVPDSACYNAMIEGLSSANK 847
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 133/288 (46%), Gaps = 11/288 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D + Y+ ++ GF + G D ++L EE+K K G+ V YGS++ G
Sbjct: 616 QGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTK--GLQPTVVTYGSVVDGLAKIDRL 673
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + EA ++ V ++ V +S++D G+ DEA + + + K L N
Sbjct: 674 DEAYMLFEEA--KSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQ-----KGLTPN 726
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + D +A F+ M +CSP+ ++++ +I+ LC +A +
Sbjct: 727 SYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQ 786
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +G+ P+ TY ++ + V + F + SG P+ A YN ++ L
Sbjct: 787 EMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSAN 846
Query: 244 -MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
+D F + +K +++ + ++ AL L++ IVG +L
Sbjct: 847 KAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA-AIVGAVL 893
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 106/248 (42%), Gaps = 9/248 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V Y ++ G + D + LFEE K GV + V+Y SL+ G+
Sbjct: 648 MKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSI--GVDLNVVIYSSLIDGFGKV 705
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA E + + ++ N +LDAL + DEA F MKN P
Sbjct: 706 GRIDEAYLILEELM--QKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSP--- 760
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++++M +G C +F A +++M + P+ +++ +I L K G + EA
Sbjct: 761 --NAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARG 818
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ G PD Y +++ N+ D F + G R N L+ L
Sbjct: 819 LFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALH 878
Query: 241 QVGMLDEA 248
+ L++A
Sbjct: 879 KADCLEQA 886
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 5/198 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ G+ D AL L D MK+ +L +NV D + G+ A + F
Sbjct: 242 TTLVRVFAREGRIDAALSLLDEMKSNS-----FTADLVLYNVCIDCFGKVGKVDMAWKFF 296
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M PD +++ LI LCK L EA EL+ E+ P Y Y ++
Sbjct: 297 HEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSA 356
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
+ D+ + + G P++ YN ++ L + G ++EA D M + + +Y
Sbjct: 357 GKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYN 416
Query: 268 FMMKALSDGGKLDEILEI 285
++ L G+L+ L++
Sbjct: 417 ILIDMLCKAGELEAALKV 434
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 6/201 (2%)
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
A +++ AL + D L LF +M+ N+ F + + +GR A+
Sbjct: 205 AYTTLIGALSAANRPDPMLTLFHQMQE-----IGYEANVHLFTTLVRVFAREGRIDAALS 259
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+ +M + D + +N ID K G + A + + EM +G+ PD+ TY L+
Sbjct: 260 LLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLC 319
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA- 264
+ R+D+ F ++ + P + YN ++ G DEA S + +K +
Sbjct: 320 KARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVI 379
Query: 265 SYKFMMKALSDGGKLDEILEI 285
+Y ++ L GK++E L I
Sbjct: 380 AYNCILTCLGRKGKVEEALRI 400
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 8/233 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y+ L+ + R G L E + K G+ + Y +++ GY G+
Sbjct: 253 RGIARDDVTYNTLIATYCRGGQMHLGAALMETM-AKSSGIEPSVITYSTMIDGYAKLGLA 311
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA+ + E N +V+ + N+++D G FDEA + M+ A +
Sbjct: 312 HEAIALFQEM--RNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAG-----FAKD 364
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + D Y QG+F++A+ + +M + SP+ L+++ LID CK+G +A L+
Sbjct: 365 IVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQ 424
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++ G+ PD Y L+D C + D+ +M D+G+RPN+ YN L+
Sbjct: 425 DVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLL 477
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 50/286 (17%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ YS ++ G+ + G + LF+E++ + V DG+ Y +++ + G +EA
Sbjct: 296 ITYSTMIDGYAKLGLAHEAIALFQEMRNQ--NVEPDGICYNTMVDIHARLGNFDEAHSIR 353
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E + V N++LD+ GKF EA+ L + MK P N+ +++ +
Sbjct: 354 RAM--EEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASP-----NILTYSAL 406
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
D YC G +DA+ +F+ + + PD + ++ L+D CKNG EA L EM+D G+
Sbjct: 407 IDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGI 466
Query: 191 NPDEYTYGLLMDA----CFEVNRV---------------------DD------------- 212
P+ TY L+DA C V + DD
Sbjct: 467 RPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQAL 526
Query: 213 ---GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
A FR+M +G++PN+ ++ ++ +++A + + M
Sbjct: 527 VLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAM 572
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 8/255 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D + ++ L+ R + R+F E++E+ G+ D V Y +L+ Y +
Sbjct: 215 MLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEER--GIARDDVTYNTLIATY-CR 271
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + E + ++S ++ S + ++++D G EA+ LF M+N++ P +
Sbjct: 272 GGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGI 331
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N M D + G F +A + R M E + D +++N L+D K G EA
Sbjct: 332 C-----YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMS 386
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM +G +P+ TY L+DA + D F+ + +GL+P++ +Y+ LV
Sbjct: 387 LLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCC 446
Query: 241 QVGMLDEAKSFFDIM 255
+ G DEA + + M
Sbjct: 447 KNGSPDEALALLEEM 461
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 9/284 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
VVY+ ++ + GD R+F E+ E+ G+ D + + +L+ EE +
Sbjct: 190 VVYNAVIDACSKGGDYPTALRIFREMLEQ--GMSPDRITFNTLISAAGRANRWEECDRIF 247
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E E + V N+++ C G+ L + M + ++ +++ M
Sbjct: 248 AEM--EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSG----IEPSVITYSTM 301
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DGY G +AI +F++M PD + +N ++D + G EA + M + G
Sbjct: 302 IDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGF 361
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
D TY L+D+ + + + + +M G PN+ Y+ L+ + G +A +
Sbjct: 362 AKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMA 421
Query: 251 FF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
F D+ L+ D Y ++ G DE L ++ + D+G
Sbjct: 422 LFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNG 465
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 19/224 (8%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D V Y+ L+ + + G L EE+K++ G + + Y +L+ Y G
Sbjct: 360 GFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQR--GASPNILTYSALIDAYCKHGFHR 417
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+AM + + + + ++ V ++++D C NG DEAL L + M + P N+
Sbjct: 418 DAMALFQDV--KKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRP-----NV 470
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF--------NNLIDQLCKNGMLA 176
++N + D Y Q + F K+ + T+ +L+D K ++
Sbjct: 471 ITYNSLLDAYGRQCLM--VRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVL 528
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
A ++ EM+ GV P+ T+ +++AC V+D + M
Sbjct: 529 AAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAM 572
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 6/197 (3%)
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+ ++ ++ V + + ++++ +L G+ D A +FDR
Sbjct: 97 GQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAG-----F 151
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + Y G+ A+E+F M + C P+ + +N +ID K G A
Sbjct: 152 GNNVFVYSSLICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDYPTALR 210
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM ++G++PD T+ L+ A NR ++ F +M + G+ + YN L+
Sbjct: 211 IFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYC 270
Query: 241 QVGMLDEAKSFFDIMVK 257
+ G + + + M K
Sbjct: 271 RGGQMHLGAALMETMAK 287
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 105/243 (43%), Gaps = 5/243 (2%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
++ L ++G++++ +K FD M + N + + S + + G G+ + I F +
Sbjct: 89 IVRELGHSGQWEKVVKSFDWMVLQQNLRSQWD-KVTSTIISSLGRLGRSDWAQLI--FDR 145
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
+ +++LI ++G LA+A E++ M P+ Y ++DAC +
Sbjct: 146 AVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGD 204
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
FR+M++ G+ P+ +N L+ + +E F M ++ + DD +Y
Sbjct: 205 YPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNT 264
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
++ GG++ ++ + GIE S + +K G E + L ++ +
Sbjct: 265 LIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQ 324
Query: 329 KAE 331
E
Sbjct: 325 NVE 327
>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
Length = 690
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 137/274 (50%), Gaps = 10/274 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V + L+ GF + G+ D F LF+ ++++ G+ D + Y +L+ GYF GM + +
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQR--GIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
++A+ + VK+ V +S +D +G A ++ RM + P N+ ++ ++
Sbjct: 345 SQAL--HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP-----NVVTYTIL 397
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C GR +A ++ ++ + P +++++LID CK G L LY +M G
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD YG+L+D + + + KM+ +R N+ V+N L+ ++ DEA
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 251 FFDIM-VKKLKMDDASYKFMMKALSDGGKLDEIL 283
F +M + +K D A++ +M+ G+L+E L
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 129/252 (51%), Gaps = 9/252 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V YS L+ GF + G+ F L+E++ + G D V+YG L+ G +G+
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM--GYPPDVVIYGVLVDGLSKQGLM 477
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
AM + +G+ S++++ V NS++D C +FDEALK+F M P +
Sbjct: 478 LHAMRFSVKMLGQ--SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP-----D 530
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +F + +GR ++A+ +F +M + PD L++ LID CK+ +L+
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M ++ D +++ F+ +R++D + +F +++ + P++ YN ++ +
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 244 MLDEAKSFFDIM 255
LDEA+ F+++
Sbjct: 651 RLDEAERIFELL 662
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 35/309 (11%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D VV+S + +V+ GD +++ + + G+ + V Y L+KG G
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ--GISPNVVTYTILIKGLCQDGRI 407
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------ 117
EA Y + + ++ S V +S++D C G L++ M PP
Sbjct: 408 YEAFGMYGQIL--KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 118 ------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
+ + +N+ FN + DG+C RF +A++VFR MG Y
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
PD +F ++ G L EA L+ M G+ PD Y L+DA + + G
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKA 272
F M + + ++AV N ++ L + +++A FF+ +++ K++ D +Y M+
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 273 LSDGGKLDE 281
+LDE
Sbjct: 646 YCSLRRLDE 654
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 9/219 (4%)
Query: 41 GGVVSDGV-VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK 99
GG+ GV +G ++ F KG +A++ ++ V E ++ V+ N VL L + +
Sbjct: 210 GGIEPSGVSAHGFVLDALFCKGEVTKALD-FHRLVMERG-FRVGIVSCNKVLKGL-SVDQ 266
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
+ A +L + + P N+ +F + +G+C +G A ++F+ M + PD
Sbjct: 267 IEVASRLLSLVLDCGPAP-----NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
++++ LID K GML +L+ + KGV D + +D + + + +++
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
M+ G+ PN+ Y L+ L Q G + EA + ++K+
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 13/277 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFM 59
M +G D YS L+ G + +D + + L+ G G D VVY S++ +
Sbjct: 310 MKTRGVTPDAFTYSALIHGLCK---ADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 366
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G EA + E + S + V N+V+D LC GK EA + ++M+ +
Sbjct: 367 SGKLLEAQKTLQEMRKQRKSPDV--VTYNTVIDGLCKLGKIAEAQVILEQMQESGD---- 420
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ ++ +++ + +G C +A ++ +M + C+PD +++ +ID LCK G L EAE
Sbjct: 421 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 480
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L M G P+ TY L+ + +VD+ +M ++G PNL YN +V L
Sbjct: 481 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 540
Query: 240 VQVGMLDEAKSFFDIM---VKKLKMDDASYKFMMKAL 273
G + EA+ M + D A+Y+ ++ AL
Sbjct: 541 CVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 577
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 45/344 (13%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D Y+ ++ GF GD L EE+K G D + ++ G + AM+
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKS--AGFAPDAFTHTPIITAMANAGDLDGAMD 168
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL-------- 120
+ ++G + +V V +++ A K +EA+KL + M+ PP +
Sbjct: 169 -HLRSMGCDPNV----VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDA 223
Query: 121 ----------------------AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
A N+ +FN + DG+C +G DA ++ M P+
Sbjct: 224 LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPN 283
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
++++ LID LCK+ EA+E+ EM +GV PD +TY L+ + +++++ R
Sbjct: 284 VVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLR 343
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGG 277
+M SG P++ VY+ ++ + G L EA+ M K+ K D +Y ++ L G
Sbjct: 344 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 403
Query: 278 KLDE---ILEIV---GGILDDGGIEFSEELQEFVKGELSKEGRE 315
K+ E ILE + G +L D + +S + K ++ E ++
Sbjct: 404 KIAEAQVILEQMQESGDVLPD-VVTYSTVINGLCKSDMLVEAQK 446
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
+S + + N V+ CN G AL+L + MK+ P + MA+
Sbjct: 106 ASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAF-THTPIITAMANA---- 160
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G A++ R MG C P+ +++ LI + L EA +L EM ++G P+ TY
Sbjct: 161 GDLDGAMDHLRSMG---CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTY 217
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
+L+DA +++ V +KM++ G PN+ +N LV + G +D+A+ IMV
Sbjct: 218 NVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA 277
Query: 258 K-LKMDDASYKFMMKALSDGGKLDEILEIV 286
K ++ + +Y ++ L K E E++
Sbjct: 278 KGMRPNVVTYSALIDGLCKSQKFLEAKEVL 307
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+ D V YS ++ G + +L + + + G D V Y +++ G G EEA
Sbjct: 422 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK--AGCNPDVVTYTTIIDGLCKCGRLEEA 479
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
Y + + + V +++ LC K DEA ++ + M+N PP NL +
Sbjct: 480 E--YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP-----NLVT 532
Query: 127 FNVMADGYCGQGRFKDAIEVFRKM--GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+N M +G C GR K+A ++ ++M G CSPD ++ +++ L + ++ EAE+L +
Sbjct: 533 YNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQ 592
Query: 185 M 185
M
Sbjct: 593 M 593
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 5/198 (2%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
S+N + + ++A ++FR C PD S+N +I C G L A EL EM
Sbjct: 79 SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
G PD +T+ ++ A +D + R M G PN+ Y L+ + L
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKL 195
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
+EA + M ++ + +Y ++ AL + ++V +++ G
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255
Query: 305 VKGELSKEGREEEVVKLM 322
V G K G ++ KL+
Sbjct: 256 VDG-FCKRGNVDDARKLL 272
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 140/302 (46%), Gaps = 37/302 (12%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG AD VY+ ++ R G+ LF+E+ +K G++ YG+L+ G G
Sbjct: 328 KGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDK--GLIPSAHTYGALIHGVCKAGQM 385
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------------ 111
E A NE G+ + ++ V N+++D C +G DEAL+L M+
Sbjct: 386 EAAQMLVNEMQGK--GIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYN 443
Query: 112 ---------NEHNPPKRL---------AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
N + K L + N SF + D YC +G F +A VFR+M E
Sbjct: 444 SIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEK 503
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT-YGLLMDACFEVNRVDD 212
P+ +++N LID K G + EA +L E+ ++G+ PD YT L+ C + +VD
Sbjct: 504 GNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECID-GKVDM 562
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
F +M GL PN+ Y ++ L + G +EA +D M + L DD Y ++
Sbjct: 563 ALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVG 622
Query: 272 AL 273
+L
Sbjct: 623 SL 624
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 151/322 (46%), Gaps = 19/322 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ L+ GF G + RLFEE++EK G+ +D VY S++ G +
Sbjct: 294 GVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK--GIEADVYVYTSIISCNCRSGNVK 351
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ ++E + + SA +++ +C G+ + A L + M+ K + +N
Sbjct: 352 RALVLFDEMT--DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQG-----KGIDLNP 404
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
FN + DGYC G +A+ + M + D ++N++ LCK EA+ L
Sbjct: 405 VIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFS 464
Query: 185 MSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M ++GV+P+ ++ L+D C E N V+ FR+M + G PN+ YN L+ + G
Sbjct: 465 MVERGVSPNTMSFTTLIDIYCKEGNFVE-AKRVFREMEEKGNVPNIITYNVLIDGYSKRG 523
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG----GKLDEILEIVGGILDDGGIEFSE 299
+ EA D + + + D + +L G GK+D L++ + G +
Sbjct: 524 NMKEAHKLKDELENRGLIPDV---YTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVV 580
Query: 300 ELQEFVKGELSKEGREEEVVKL 321
+ G LSK+GR EE KL
Sbjct: 581 TYTAMISG-LSKDGRSEEAFKL 601
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 14/281 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYG--SLMKGYFMKG 61
KGF D +L R G D R F ++ + + VY ++ G +G
Sbjct: 188 KGFHIDERSCLVYLLALRRGGQVDSCLRFFR----RMVNLDVEVTVYSLTIVLDGLCKRG 243
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E + +E + VK + V N+ ++ ++ M+ E +A
Sbjct: 244 DVEMGRKLMDEVAAK--GVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG-----VA 296
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N+ ++ ++ G+ G+ ++A +F +M E D + ++I C++G + A L
Sbjct: 297 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVL 356
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ EM+DKG+ P +TYG L+ + +++ +M G+ N ++N L+ +
Sbjct: 357 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 416
Query: 242 VGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
GM+DEA +M KK L+ D +Y + L + DE
Sbjct: 417 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDE 457
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 8/233 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y+ L+ + R G L E + K G+ + Y +++ GY G+
Sbjct: 254 RGIARDDVTYNTLIATYCRGGQMHLGAALMETM-AKSSGIEPSVITYSTMIDGYAKLGLA 312
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA+ + E N +V+ + N+++D G FDEA + M+ A +
Sbjct: 313 HEAIALFQEM--RNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAG-----FAKD 365
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + D Y QG+F++A+ + +M + SP+ L+++ LID CK+G +A L+
Sbjct: 366 IVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQ 425
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++ G+ PD Y L+D C + D+ +M D+G+RPN+ YN L+
Sbjct: 426 DVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLL 478
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 50/286 (17%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ YS ++ G+ + G + LF+E++ + V DG+ Y +++ + G +EA
Sbjct: 297 ITYSTMIDGYAKLGLAHEAIALFQEMRNQ--NVEPDGICYNTMVDIHARLGNFDEAHSIR 354
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E + V N++LD+ GKF EA+ L + MK P N+ +++ +
Sbjct: 355 RAM--EEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASP-----NILTYSAL 407
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
D YC G +DA+ +F+ + + PD + ++ L+D CKNG EA L EM+D G+
Sbjct: 408 IDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGI 467
Query: 191 NPDEYTYGLLMDA----CFEVNR------------------------------------- 209
P+ TY L+DA C V +
Sbjct: 468 RPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQAL 527
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
V A FR+M +G++PN+ ++ ++ +++A S + M
Sbjct: 528 VLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAM 573
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 8/255 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D + ++ L+ R + R+F E++E+ G+ D V Y +L+ Y +
Sbjct: 216 MLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEER--GIARDDVTYNTLIATY-CR 272
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + E + ++S ++ S + ++++D G EA+ LF M+N++ P +
Sbjct: 273 GGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGI 332
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N M D + G F +A + R M E + D +++N L+D K G EA
Sbjct: 333 C-----YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMS 387
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM +G +P+ TY L+DA + D F+ + +GL+P++ +Y+ LV
Sbjct: 388 LLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCC 447
Query: 241 QVGMLDEAKSFFDIM 255
+ G DEA + + M
Sbjct: 448 KNGSPDEALALLEEM 462
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 9/284 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
VVY+ ++ + GD R+F E+ E+ G+ D + + +L+ EE +
Sbjct: 191 VVYNAVIDACSKGGDYPTALRIFREMLEQ--GMSPDRITFNTLISAAGRANRWEECDRIF 248
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E E + V N+++ C G+ L + M + ++ +++ M
Sbjct: 249 AEM--EERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSG----IEPSVITYSTM 302
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DGY G +AI +F++M PD + +N ++D + G EA + M + G
Sbjct: 303 IDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGF 362
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
D TY L+D+ + + + + +M G PN+ Y+ L+ + G +A +
Sbjct: 363 AKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMA 422
Query: 251 FF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
F D+ L+ D Y ++ G DE L ++ + D+G
Sbjct: 423 LFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNG 466
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 19/224 (8%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D V Y+ L+ + + G L EE+K++ G + + Y +L+ Y G
Sbjct: 361 GFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQR--GASPNILTYSALIDAYCKHGFHR 418
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+AM + + + + ++ V ++++D C NG DEAL L + M + P N+
Sbjct: 419 DAMALFQDV--KKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRP-----NV 471
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF--------NNLIDQLCKNGMLA 176
++N + D Y Q + F K+ + T+ +L+D K ++
Sbjct: 472 ITYNSLLDAYGRQCLM--VRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVL 529
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
A ++ EM+ GV P+ T+ +++AC V+D ++ M
Sbjct: 530 AAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAM 573
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 6/197 (3%)
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+ ++ ++ V + + ++++ +L G+ D A +FDR
Sbjct: 98 GQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAG-----F 152
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + Y G+ A+E+F M + C P+ + +N +ID K G A
Sbjct: 153 GNNVFVYSSLICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDYPTALR 211
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM ++G++PD T+ L+ A NR ++ F +M + G+ + YN L+
Sbjct: 212 IFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYC 271
Query: 241 QVGMLDEAKSFFDIMVK 257
+ G + + + M K
Sbjct: 272 RGGQMHLGAALMETMAK 288
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 105/243 (43%), Gaps = 5/243 (2%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
++ L ++G++++ +K FD M + N + + S + + G G+ + I F +
Sbjct: 90 IVRELGHSGQWEKVVKSFDWMVLQQNLRSQWD-KVTSTIISSLGRLGRSDWAQLI--FDR 146
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
+ +++LI ++G LA+A E++ M P+ Y ++DAC +
Sbjct: 147 AVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGD 205
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
FR+M++ G+ P+ +N L+ + +E F M ++ + DD +Y
Sbjct: 206 YPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNT 265
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
++ GG++ ++ + GIE S + +K G E + L ++ +
Sbjct: 266 LIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQ 325
Query: 329 KAE 331
E
Sbjct: 326 NVE 328
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 147/320 (45%), Gaps = 11/320 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ GF + G + ++ +++ E + D V Y +L+ GY +G EEAM+
Sbjct: 286 VTYNTMINGFCKKGLMESAMKIVDQMTET-EDCMPDTVTYTTLIDGYCKRGELEEAMKYM 344
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E V N + + + N+++ LC NG DEA ++ RM+ L N+ + +
Sbjct: 345 EEMVSRN--CEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLN-----GLKDNVATHTSI 397
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C G+ DA ++M D ++ ++++ CK G +A L EM +G+
Sbjct: 398 LKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGI 457
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV-GMLDEAK 249
NP ++ + E + D R+M G PN Y+ ++ L + G + E +
Sbjct: 458 NPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVE 517
Query: 250 SFFDIMVKKLKMDDAS-YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGE 308
F D M + DAS Y +++K + G D + + +LD G + E FVKG
Sbjct: 518 EFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKG- 576
Query: 309 LSKEGREEEVVKLMEKKERE 328
LS + + EV K E+ R
Sbjct: 577 LSAKEKAFEVEKFFEEMSRR 596
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 132/282 (46%), Gaps = 12/282 (4%)
Query: 39 KLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNG 98
K G V D Y ++++GY GM E A ++E K + V N++++ C G
Sbjct: 245 KEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM-----GCKPNLVTYNTMINGFCKKG 299
Query: 99 KFDEALKLFDRM-KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
+ A+K+ D+M + E P + ++ + DGYC +G ++A++ +M C P
Sbjct: 300 LMESAMKIVDQMTETEDCMPDTV-----TYTTLIDGYCKRGELEEAMKYMEEMVSRNCEP 354
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
+ L++N +I LC NG + EA+ + M G+ + T+ ++ V ++DD A +
Sbjct: 355 NVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHL 414
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDG 276
++MV G+ + Y +V + ++G D+A S M + + +S+ + + L +
Sbjct: 415 KEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVES 474
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
GK D+ I+ + G + G +GR EV
Sbjct: 475 GKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEV 516
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 144/318 (45%), Gaps = 9/318 (2%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE-KLGGVVSDGVVYGSLMKGYFM 59
M V+G A+ + Y+ L+ G+ + G +++ LKE + G+ + V + L+ G+
Sbjct: 189 MKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCK 248
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
AM+ + E VK + V NS+++ LCNNGK +EA L D+M N P
Sbjct: 249 DKNVSAAMKVFAEM--NRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKP-- 304
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ + N + +G+C K A E+F M + +P+ ++N LID CK+ + +A
Sbjct: 305 ---NIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAF 361
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
LY M KGV PD TY L+ ++ +M L+ +L YN L+ L
Sbjct: 362 ALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSL 421
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
G + +A D M +K LK +Y M+ G L L + + G +
Sbjct: 422 CNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANV 481
Query: 299 EELQEFVKGELSKEGREE 316
+KG K+ E+
Sbjct: 482 ATYNVLIKGFCKKDKLED 499
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 144/295 (48%), Gaps = 37/295 (12%)
Query: 9 DPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY--------- 57
+P + S+ ++ G + G + + E++K + GV ++ + Y +L+ GY
Sbjct: 160 EPTLISFNIVINGLCKVGKLNKAGDIIEDMKVR--GVSANVITYNTLIDGYCKMGKIGKM 217
Query: 58 -----FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN 112
+K M + + C NE V N ++D C + A+K+F M
Sbjct: 218 YKADAILKEMRADGI-CPNE------------VTFNILIDGFCKDKNVSAAMKVFAEMNR 264
Query: 113 EHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
+ P N+ ++N + +G C G+ +A + +M P+ ++ N L++ CKN
Sbjct: 265 QGVKP-----NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKN 319
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
M+ +A EL+ +M +G+ P+ TY +L+DA + ++D +R M+ G+ P+++ Y
Sbjct: 320 KMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTY 379
Query: 233 NRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
N L+ L + G L+ A++ M K LK D +Y ++ +L + G++ + L ++
Sbjct: 380 NCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLL 434
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 139/318 (43%), Gaps = 45/318 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V ++ L+ GF +D + ++F E+ + GV + V Y SL+ G
Sbjct: 227 MRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQ--GVKPNVVTYNSLINGLCNN 284
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA ++ V NS +K + + +N++L+ C N +A +LFD M P + +
Sbjct: 285 GKVNEATALRDQMV--NSCLKPNIITHNALLNGFCKNKMVKQAGELFDDM-----PKQGI 337
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKM---------GEYRC---------------- 155
N+ ++N++ D YC +DA ++R M Y C
Sbjct: 338 TPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARN 397
Query: 156 ----------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
D +++N LID LC G + +A L EM KG+ P + TY ++D
Sbjct: 398 LVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYC 457
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDA 264
+ + +M G N+A YN L+ + L++A + M++K L +
Sbjct: 458 KEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRM 517
Query: 265 SYKFMMKALSDGGKLDEI 282
+Y+ + + + + G + +I
Sbjct: 518 TYEIVTEEMMEKGFVPDI 535
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 13/217 (5%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+K+S + N ++ L G+ + ++ M +R+ L SFN++ +G C G+
Sbjct: 124 LKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIR-----RRIEPTLISFNIVINGLCKVGK 178
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA---EAEELYGEMSDKGVNPDEYT 196
A ++ M S + +++N LID CK G + +A+ + EM G+ P+E T
Sbjct: 179 LNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVT 238
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
+ +L+D + V F +M G++PN+ YN L+ L G ++EA + D MV
Sbjct: 239 FNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMV 298
Query: 257 KK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
LK + ++ AL +G +++++ G + DD
Sbjct: 299 NSCLKPNIITH----NALLNGFCKNKMVKQAGELFDD 331
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L +++ S N + G G D V+++M R P +SFN +I+ LCK G L +A
Sbjct: 124 LKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAG 183
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY-----FRKMVDSGLRPNLAVYNR 234
++ +M +GV+ + TY L+D ++ ++ G Y ++M G+ PN +N
Sbjct: 184 DIIEDMKVRGVSANVITYNTLIDGYCKMGKI--GKMYKADAILKEMRADGICPNEVTFNI 241
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL----EIVGGI 289
L+ + + A F M ++ +K + +Y ++ L + GK++E ++V
Sbjct: 242 LIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC 301
Query: 290 LDDGGIEFSEELQEFVKGELSKEGRE 315
L I + L F K ++ K+ E
Sbjct: 302 LKPNIITHNALLNGFCKNKMVKQAGE 327
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D Y+ L+ G R GD + L E+ K + +D + Y L+ K
Sbjct: 367 MLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTK--HLKADLITYNILIDSLCNK 424
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ +E + +K S + N+++D C G AL L +M+ RL
Sbjct: 425 GEMKKALRLLDEMCRK--GLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVG----RL 478
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE- 179
A N+ ++NV+ G+C + + +DA + +M E P+ +++ + +++ + G + + E
Sbjct: 479 A-NVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEG 537
Query: 180 ELY 182
LY
Sbjct: 538 HLY 540
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 140/302 (46%), Gaps = 37/302 (12%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG AD VY+ ++ R G+ LF+E+ +K G++ YG+L+ G G
Sbjct: 324 KGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDK--GLIPSAHTYGALIHGVCKAGQM 381
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------------ 111
E A NE G+ + ++ V N+++D C +G DEAL+L M+
Sbjct: 382 EAAQMLVNEMQGK--GIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYN 439
Query: 112 ---------NEHNPPKRL---------AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
N + K L + N SF + D YC +G F +A VFR+M E
Sbjct: 440 SIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEK 499
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT-YGLLMDACFEVNRVDD 212
P+ +++N LID K G + EA +L E+ ++G+ PD YT L+ C + +VD
Sbjct: 500 GNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECID-GKVDM 558
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
F +M GL PN+ Y ++ L + G +EA +D M + L DD Y ++
Sbjct: 559 ALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVG 618
Query: 272 AL 273
+L
Sbjct: 619 SL 620
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 151/322 (46%), Gaps = 19/322 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ L+ GF G + RLFEE++EK G+ +D VY S++ G +
Sbjct: 290 GVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK--GIEADVYVYTSIISCNCRSGNVK 347
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ ++E + + SA +++ +C G+ + A L + M+ K + +N
Sbjct: 348 RALVLFDEMT--DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQG-----KGIDLNP 400
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
FN + DGYC G +A+ + M + D ++N++ LCK EA+ L
Sbjct: 401 VIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFS 460
Query: 185 MSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M ++GV+P+ ++ L+D C E N V+ FR+M + G PN+ YN L+ + G
Sbjct: 461 MVERGVSPNTMSFTTLIDIYCKEGNFVE-AKRVFREMEEKGNVPNIITYNVLIDGYSKRG 519
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG----GKLDEILEIVGGILDDGGIEFSE 299
+ EA D + + + D + +L G GK+D L++ + G +
Sbjct: 520 NMKEAHKLKDELENRGLIPDV---YTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVV 576
Query: 300 ELQEFVKGELSKEGREEEVVKL 321
+ G LSK+GR EE KL
Sbjct: 577 TYTAMISG-LSKDGRSEEAFKL 597
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 14/281 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYG--SLMKGYFMKG 61
KGF D +L R G D R F ++ + + VY ++ G +G
Sbjct: 184 KGFHIDERSCLVYLLALRRGGQVDSCLRFFR----RMVNLDVEVTVYSLTIVLDGLCKRG 239
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E + +E + VK + V N+ ++ ++ M+ E +A
Sbjct: 240 DVEMGRKLMDEVAAK--GVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG-----VA 292
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N+ ++ ++ G+ G+ ++A +F +M E D + ++I C++G + A L
Sbjct: 293 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVL 352
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ EM+DKG+ P +TYG L+ + +++ +M G+ N ++N L+ +
Sbjct: 353 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 412
Query: 242 VGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
GM+DEA +M KK L+ D +Y + L + DE
Sbjct: 413 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDE 453
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 40/284 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V ++ L+ G R + + L+ G + + V Y S++ GY G E
Sbjct: 264 GCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRD-GVCMPNVVTYTSVISGYCKAGRME 322
Query: 65 EAMECYNE--AVGENSSVKM---------------SAVAN----------------NSVL 91
+AM YN+ AVG + +V SAVA +S++
Sbjct: 323 DAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLI 382
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
D C G+ D+A+K++ M H P N +F ++ +C Q R +A+ +KM
Sbjct: 383 DGYCRCGQLDDAMKIWTEMAQYHIQP-----NAHTFCIIIHTFCKQNRSGEALHFLKKMN 437
Query: 152 -EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+P +N +ID LCK G + EA + EM +KG PD+YTY +L+ R+
Sbjct: 438 MRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRI 497
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
+ T+F KMV++G P+ V N + L++ GM E I
Sbjct: 498 AEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMPGEVDHIMRI 541
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 149/349 (42%), Gaps = 47/349 (13%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVV-YGSLMKGYFMKGMEEEAMECYN 71
Y+ LM F+ G LFE + GGV S V + ++KG G ++A+E
Sbjct: 201 YNKLMDLFIGHGRVQDAVALFEGWIQ--GGVYSPDVWSFNVVIKGVCKVGDVQKALELVE 258
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+ V +N +++ LC + + ++ R++ + N+ ++ +
Sbjct: 259 RM--DEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRD----GVCMPNVVTYTSVI 312
Query: 132 DGYCGQGRFKD-----------------------------------AIEVFRKMGEYRCS 156
GYC GR +D A+ V+++M RC
Sbjct: 313 SGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCL 372
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
PD ++F++LID C+ G L +A +++ EM+ + P+ +T+ +++ + NR + +
Sbjct: 373 PDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHF 432
Query: 217 FRKM-VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
+KM + + + P +YN ++ L + G +DEA M +K + D +Y ++
Sbjct: 433 LKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHC 492
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
G++ E + +++ G S + F+ L K G EV +M
Sbjct: 493 MKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLL-KSGMPGEVDHIMR 540
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 8/181 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++ + D V +S L+ G+ R G D +++ E+ + + + + ++ + +
Sbjct: 366 MILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQY--HIQPNAHTFCIIIHTFCKQ 423
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA+ + + + + + A N V+D LC GK DEA + M+ + P +
Sbjct: 424 NRSGEALH-FLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKY 482
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ G+C +GR +A+ F KM E CSPD++ N+ I L K+GM E +
Sbjct: 483 -----TYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMPGEVDH 537
Query: 181 L 181
+
Sbjct: 538 I 538
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 37/209 (17%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNE--HNPPKRL-------------------- 120
SA + V+ +C +G+ +AL+LFD+M ++ + P R
Sbjct: 126 SAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLDAAAAL 185
Query: 121 ---------AVNLGSFNVMADGYCGQGRFKDAIEVFRKM---GEYRCSPDTLSFNNLIDQ 168
++ ++N + D + G GR +DA+ +F G Y SPD SFN +I
Sbjct: 186 LSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVY--SPDVWSFNVVIKG 243
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL-RP 227
+CK G + +A EL M + G +PD T+ +L++ V G R++ G+ P
Sbjct: 244 VCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMP 303
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
N+ Y ++ + G +++A + ++ MV
Sbjct: 304 NVVTYTSVISGYCKAGRMEDAMAVYNDMV 332
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 154/322 (47%), Gaps = 17/322 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + V ++ L+ GF +D + + FEE++++ G+ + V Y SL+ G
Sbjct: 264 MLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQ--GLKPNIVTYNSLINGLCNN 321
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA++ +++ VG +K + V N++++ C EA K+FD + + P
Sbjct: 322 GKLEEAIDLWDKMVG--LGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVP--- 376
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +FN M D YC +G ++ + M + P+ ++N LI LC+ L A+E
Sbjct: 377 --NVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKE 434
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM +KG+ D TY +L+D + ++ + +M + GL+PN YN L+
Sbjct: 435 LLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYC 494
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILD---DGGIE 296
G L A + M K+ K + +Y ++K K LE G+L+ + G+
Sbjct: 495 MEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINK----LEAANGLLNEMLEKGLN 550
Query: 297 FSEELQEFVKGELSKEGREEEV 318
+ + V+ E+ ++G ++
Sbjct: 551 PNRTTYDIVRLEMLEKGFSPDI 572
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 132/282 (46%), Gaps = 35/282 (12%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY-------------- 57
++ + G R G + E++K G+ + V Y +L+ GY
Sbjct: 202 TFNIFINGLCRAGKLNKAEDAIEDMKA--WGISPNVVTYNTLVDGYCKRGSAGKMYKAEA 259
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
FMK M + C NE V N+++D C + A K F+ M+ + P
Sbjct: 260 FMKEMLANKI-CPNE------------VTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKP 306
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
N+ ++N + +G C G+ ++AI+++ KM P+ +++N LI+ CK M+ E
Sbjct: 307 -----NIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKE 361
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A +++ ++S + + P+ T+ ++DA + +++G + M+D G+ PN++ YN L+
Sbjct: 362 ATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIA 421
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
L + L AK + M K LK D +Y ++ L K
Sbjct: 422 GLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDK 463
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 58 FMKGMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
++K +E + C EA ++ K+S + N +L AL K + ++ M
Sbjct: 140 YVKNLE---LHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIK--- 193
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN--- 172
+R+ NL +FN+ +G C G+ A + M + SP+ +++N L+D CK
Sbjct: 194 --RRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSA 251
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
G + +AE EM + P+E T+ L+D + V F +M GL+PN+ Y
Sbjct: 252 GKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTY 311
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMV 256
N L+ L G L+EA +D MV
Sbjct: 312 NSLINGLCNNGKLEEAIDLWDKMV 335
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 127/250 (50%), Gaps = 9/250 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF + V Y+ ++ F ++G D L EE+ K G+ + Y ++ G
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK--GLTLNSQGYNGMIYALCKDGRM 432
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAM E + + + + N+++ LCNN + +EA +F+ + E + N
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSY--NTIIYHLCNNEQMEEAEHMFENLLEEG-----VVAN 485
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + GR++DA+ + ++M + CS D +S+N LI +CK+G + + L
Sbjct: 486 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM++KG+ P+ +Y +L+ + RV D ++M++ GL P++ YN L+ L ++G
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 605
Query: 244 MLDEAKSFFD 253
+ A + +
Sbjct: 606 WMHAALNLLE 615
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 11/300 (3%)
Query: 35 ELKEKLG--GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLD 92
EL E +G G D Y LM G G A+ E E + V VL
Sbjct: 332 ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM--EKKGFAPNVVTYTIVLH 389
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
+ C NG +D+ L + M K L +N +N M C GR +A+ + ++M
Sbjct: 390 SFCKNGMWDDTRALLEEMSA-----KGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 444
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
C+PD S+N +I LC N + EAE ++ + ++GV + TY ++ A R D
Sbjct: 445 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQD 504
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
++M+ G ++ YN L+ + + G +D + + M +K +K ++ SY ++
Sbjct: 505 AVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILIS 564
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAE 331
L ++ + LE+ +L+ G + G L K G + L+EK E
Sbjct: 565 ELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING-LCKMGWMHAALNLLEKLHNENVH 623
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ ++ + + +FE L E+ GVV++G+ Y +++
Sbjct: 442 MRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE--GVVANGITYNTIIHALLRD 499
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ E + S + V+ N ++ A+C +G D +L L + M K +
Sbjct: 500 GRWQDAVRLAKEMILHGCS--LDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE-----KGI 552
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N S+N++ C + R +DA+E+ ++M +PD +++N LI+ LCK G + A
Sbjct: 553 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 612
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
L ++ ++ V+PD TY +L+ +V +DD A +
Sbjct: 613 LLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 139/333 (41%), Gaps = 40/333 (12%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
R G +D L + G V D V+Y +++ +G EA NE + +
Sbjct: 185 LCRLGRADEALALLRGMARH--GCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCA 242
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA------------------ 121
++ + V+ +C G+ EA +L DRM + P +
Sbjct: 243 ADVNTF--DDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300
Query: 122 --------VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
+N+ FN + G +G+ +A E++ MG C PD +++ L+ LCK G
Sbjct: 301 AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG 360
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
+ A L EM KG P+ TY +++ + + DD +M GL N YN
Sbjct: 361 RIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 420
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
++ L + G +DEA M + D SY ++ L + +++E + +L++
Sbjct: 421 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480
Query: 293 G----GIEFSEELQEFVKGELSKEGREEEVVKL 321
G GI ++ + + ++GR ++ V+L
Sbjct: 481 GVVANGITYNTIIHALL-----RDGRWQDAVRL 508
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 106/249 (42%), Gaps = 8/249 (3%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
V+ S + N VL L +AL L+ RM + R+ +F V A C GR
Sbjct: 135 VQPSFRSYNVVLSVLARADCHADALALYRRMVHR----DRVPPTTFTFGVAARALCRLGR 190
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+A+ + R M + C PD + + +I LC G + EA L EM G D T+
Sbjct: 191 ADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKL 259
++ + RV + A +M+ G P + Y L+ L +V DEA++ +
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG---RVP 307
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
+++ + ++ GKL E E+ + G + + G L K GR V
Sbjct: 308 ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHG-LCKLGRIGSAV 366
Query: 320 KLMEKKERE 328
+L+ + E++
Sbjct: 367 RLLREMEKK 375
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 12/299 (4%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+KG D ++ L+ + GD RLFEE+K G D V Y +L+ G
Sbjct: 388 LKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKS--SGCTPDEVTYNTLIDNLCSLGK 445
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A++ E E++ S V N+++D LC + +EA ++FD+M + ++
Sbjct: 446 LGKALDLLKEM--ESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQG-----ISR 498
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +FN + DG C R DA ++ +M P+ +++N+++ CK G + +A ++
Sbjct: 499 NAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 558
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M+ G D TYG L++ + R R M G+R YN ++ L +
Sbjct: 559 QTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRR 618
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSD-GGKLDEILEIVGGILDDGGI-EFS 298
+A + F M + + DA +YK + + L GG + E + + ++D G I EFS
Sbjct: 619 NNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFS 677
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 137/284 (48%), Gaps = 12/284 (4%)
Query: 9 DPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
DP V++Y ++ ++G + + ++ E+ G + D + +L+ EEA
Sbjct: 322 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVER--GCLPDITTFNTLIVALCSGNRLEEA 379
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
++ + + S + N +++ALC G AL+LF+ MK+ P + +
Sbjct: 380 LDLARQVTLKGLSPDVYTF--NILINALCKVGDPQLALRLFEEMKSSGCTPDEV-----T 432
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + D C G+ A+++ ++M C T+++N +ID LCK + EAEE++ +M
Sbjct: 433 YNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMD 492
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+G++ + T+ L+D + R+DD +M+ GL+PN YN ++ + G +
Sbjct: 493 LQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIK 552
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
+A M ++D +Y ++ L G+ L+++ G+
Sbjct: 553 KAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGM 596
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 141/315 (44%), Gaps = 11/315 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V ++ LM R + EE+ GV D + +LM+G+ +G
Sbjct: 179 RGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS--SGVAPDETTFTTLMQGFVEEGSI 236
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A+ + S + V N +++ C G+ ++AL + P ++
Sbjct: 237 KAALRVKARMLEMGCSP--TKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQI--- 291
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N +G C G A++V M + PD ++N +++ LCKNG L EA+ +
Sbjct: 292 --TYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 349
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M ++G PD T+ L+ A NR+++ R++ GL P++ +N L+ L +VG
Sbjct: 350 QMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVG 409
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
A F+ M D+ +Y ++ L GKL + L+++ + G +
Sbjct: 410 DPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYN 469
Query: 303 EFVKGELSKEGREEE 317
+ G L K+ R EE
Sbjct: 470 TIIDG-LCKKMRIEE 483
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 40/205 (19%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
NV+ +G + K V+ +MGE PD ++FN L+ LC+ + A + EMS
Sbjct: 157 LNVLVEG----SKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 212
Query: 187 DKGVNPDEYTYGLLMDACFE-----------------------------------VNRVD 211
GV PDE T+ LM E + RV+
Sbjct: 213 SSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVE 272
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMM 270
D Y ++ + +G P+ YN V L Q G + A D+MV++ D +Y ++
Sbjct: 273 DALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVV 332
Query: 271 KALSDGGKLDEILEIVGGILDDGGI 295
L G+L+E I+ +++ G +
Sbjct: 333 NCLCKNGQLEEAKGILNQMVERGCL 357
>gi|255661010|gb|ACU25674.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 376
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 120/240 (50%), Gaps = 9/240 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ +M G +G D V ++E +K+ GG V D + YG L+ G+ G +++
Sbjct: 62 FNIMMRGLFDNGRVDEVNSIWELMKK--GGYVEDSITYGILVHGFCKNGYINKSLHLLE- 118
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ E A+A +++ LC K ++A+ + + M P N +N + +
Sbjct: 119 -IXERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKP-----NTHVYNALIN 172
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G G + +DAI VFR+MG CSP ++++ LI+ LCK+ +EA +L EM +KG+ P
Sbjct: 173 GLIGASKSEDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTP 232
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
TY LLM ++V+ + ++ G +P++ ++N L+ L V A S +
Sbjct: 233 SVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLY 292
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 126/280 (45%), Gaps = 14/280 (5%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+++++ + V D VVY +++ G++ G ++ E + E +G+ S S
Sbjct: 4 GDIDGAERVYKDIVD--SKVSPDAVVYNAMLNGFYRAGRIKDCFELW-EMMGKEGS--RS 58
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ N ++ L +NG+ DE +++ MK + ++ ++ G+C G +
Sbjct: 59 VASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSI-----TYGILVHGFCKNGYINKS 113
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ + D L++ +I+ LCK L +A + M G P+ + Y L++
Sbjct: 114 LHLLEIXERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALING 173
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
++ +D FR+M P + Y+ L+ L + EA M++K L
Sbjct: 174 LIGASKSEDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPS 233
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+Y +MK L G K++ L++ + G F ++Q
Sbjct: 234 VITYSLLMKGLCLGHKVEMALQLWNQVTKKG---FKPDVQ 270
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 125/289 (43%), Gaps = 44/289 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+V D + Y L+ GF ++G + L E + K G D + Y ++ G + E
Sbjct: 89 GYVEDSITYGILVHGFCKNGYINKSLHLLEIXERK--GRXXDALAYXPMINGLCKETKLE 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ N + S K + N++++ L K ++A+++F M H P +
Sbjct: 147 KAVSVLNGMI--QSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGFPHCSP-----TI 199
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++++ +G C RF +A ++ ++M E +P ++++ L+ LC + A +L+ +
Sbjct: 200 VTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKVEMALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDA-C------------FEVNR---------------------- 209
++ KG PD + +L+ C ++NR
Sbjct: 260 VTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWNCSPNLVTHNTLMEGFYKDGD 319
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+ + + +++ + L+P++ YN + L + +A F V+K
Sbjct: 320 IRNALVMWARILKNELQPDIISYNITLKGLCSCNRISDAILFLHDAVRK 368
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 95/228 (41%), Gaps = 9/228 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VY+ L+ G + S+ R+F E+ V Y L+ G
Sbjct: 155 MIQSGCKPNTHVYNALINGLIGASKSEDAIRVFREMG--FPHCSPTIVTYSILINGLCKS 212
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA + E + + S + + ++ LC K + AL+L++++ + P
Sbjct: 213 ERFSEAYDLVKEML--EKGLTPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKP--- 267
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ N++ G C + + A+ ++ M + CSP+ ++ N L++ K+G + A
Sbjct: 268 --DVQMHNILIHGLCSVAKTQHALSLYLDMNRWNCSPNLVTHNTLMEGFYKDGDIRNALV 325
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
++ + + PD +Y + + NR+ D + V + P
Sbjct: 326 MWARILKNELQPDIISYNITLKGLCSCNRISDAILFLHDAVRKKIFPT 373
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V YS L+ G + + L +E+ EK G+ + Y LMKG + E A++ +
Sbjct: 200 VTYSILINGLCKSERFSEAYDLVKEMLEK--GLTPSVITYSLLMKGLCLGHKVEMALQLW 257
Query: 71 NEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
N+ G V+M +N ++ LC+ K AL L+ M + P NL + N
Sbjct: 258 NQVTKKGFKPDVQM----HNILIHGLCSVAKTQHALSLYLDMNRWNCSP-----NLVTHN 308
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ +G+ G ++A+ ++ ++ + PD +S+N + LC +++A + K
Sbjct: 309 TLMEGFYKDGDIRNALVMWARILKNELQPDIISYNITLKGLCSCNRISDAILFLHDAVRK 368
Query: 189 GVNPDEYT 196
+ P + T
Sbjct: 369 KIFPTKIT 376
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++ + + + SPD + +N +++ + G + + EL+ M +G +
Sbjct: 1 CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEG-SRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ RVD+ + + M G + Y LV + G ++++ +I
Sbjct: 60 ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEI 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
+K + DA +Y M+ L KL++ + ++ G++ G + + G +
Sbjct: 120 XERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASK 179
Query: 314 REEEV 318
E+ +
Sbjct: 180 SEDAI 184
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++ +VDS + P+ VYN ++ + G + + +++M K+ AS+ M
Sbjct: 6 IDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEGSRSVASFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D G++DE+ I + G +E S V G K G + + L+E ER+
Sbjct: 66 MRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHG-FCKNGYINKSLHLLEIXERK 123
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 165/363 (45%), Gaps = 48/363 (13%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V+Y+ ++ + + LF E+ K G+ +D V Y +L+ G+ + G +EA+
Sbjct: 197 PDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVK--GISADVVTYNTLIYGFCIVGKLKEAI 254
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM----------------- 110
NE V + ++ + N ++DALC GK EA + M
Sbjct: 255 GLLNEMVLK--TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMD 312
Query: 111 ---------KNEH--NPPKRLAV--NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
K +H N + V ++ ++ ++ +G+C +A+ +F++M + P
Sbjct: 313 GYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP 372
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
+++++LID LCK+G ++ +L EM D+G D TY L+D + +D F
Sbjct: 373 GIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALF 432
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDG 276
KM D +RPN+ + L+ L + G L +A+ F D++ K ++ +Y M+
Sbjct: 433 NKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ 492
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKARE 336
G L+E L ++ + D+G I + E ++ L +K E +KAE R+
Sbjct: 493 GLLEEALTMLSKMEDNGCIPNAFTF-------------ETIIIALFKKDENDKAEKLLRQ 539
Query: 337 AEA 339
A
Sbjct: 540 MIA 542
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 13/227 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G D Y+ L+ GF ++ D LF+E+ +K +V V Y SL+ G
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQK--NMVPGIVTYSSLIDGLCKS 387
Query: 61 GMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G + +E G+ + V + +S++D LC NG D A+ LF++MK++ P
Sbjct: 388 GRISYVWDLIDEMRDRGQPADV----ITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRP- 442
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N+ +F ++ DG C GR KDA EVF+ + + ++N +I+ CK G+L EA
Sbjct: 443 ----NIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEA 498
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+ +M D G P+ +T+ ++ A F+ + D R+M+ GL
Sbjct: 499 LTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 23/258 (8%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK-------LGGVVSDGVVYGSLMKGYFMK 60
D + YS LM DG F ++E K + L GV D Y L+ G+
Sbjct: 302 PDVITYSTLM---------DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M +EA+ + E +N + V +S++D LC +G+ L D M++ P
Sbjct: 353 KMVDEALNLFKEMHQKN--MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQP---- 406
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + DG C G AI +F KM + P+ +F L+D LCK G L +A+E
Sbjct: 407 -ADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQE 465
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ ++ KG + + YTY ++++ + +++ T KM D+G PN + ++ L
Sbjct: 466 VFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALF 525
Query: 241 QVGMLDEAKSFFDIMVKK 258
+ D+A+ M+ +
Sbjct: 526 KKDENDKAEKLLRQMIAR 543
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V N+++ LC G+ +AL D++ + +N S+ + +G C G + A
Sbjct: 129 TVTLNTLIKGLCLKGQVKKALHFHDKLLAQ-----GFQLNQVSYATLINGVCKIGDTRAA 183
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
I+ RK+ PD + +N +ID +CK +++EA L+ EM+ KG++ D TY L+
Sbjct: 184 IKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYG 243
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
V ++ + +MV + PN+ YN LV L + G + EAKS +M+K +K D
Sbjct: 244 FCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD 303
Query: 263 DASYKFMM 270
+Y +M
Sbjct: 304 VITYSTLM 311
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 145/322 (45%), Gaps = 11/322 (3%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+KG D + + L+ F G F + ++ ++ G D V +L+KG +KG
Sbjct: 87 LKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKR--GYPPDTVTLNTLIKGLCLKGQ 144
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
++A+ +++ + + +++ V+ ++++ +C G A+K ++ P
Sbjct: 145 VKKALHFHDKLLAQ--GFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKP----- 197
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ +N + D C +A +F +M S D +++N LI C G L EA L
Sbjct: 198 DVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 257
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM K +NP+ YTY +L+DA + +V + + M+ + ++P++ Y+ L+ V
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLV 317
Query: 243 GMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+ +A+ F+ M + + D +Y ++ +DE L + + +
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377
Query: 302 QEFVKGELSKEGREEEVVKLME 323
+ G L K GR V L++
Sbjct: 378 SSLIDG-LCKSGRISYVWDLID 398
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA+ F +M R +P + FN ++D K + A L + KG+ PD T +L+
Sbjct: 42 DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLK 260
+ + ++ G + K++ G P+ N L+ L G + +A F D ++ + +
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161
Query: 261 MDDASYKFMMKALSDGG 277
++ SY ++ + G
Sbjct: 162 LNQVSYATLINGVCKIG 178
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 43/218 (19%)
Query: 101 DEALKLFDRMKN-EHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
D+A+ F+RM H PP + FN + D + + A+ + ++ PD
Sbjct: 41 DDAVSQFNRMLCMRHTPP------IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDL 94
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-C-------------- 204
++ N LI+ C G + + ++ +G PD T L+ C
Sbjct: 95 ITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDK 154
Query: 205 -----FEVNRVD--------------DGATYFRKMVDSGL-RPNLAVYNRLVGKLVQVGM 244
F++N+V A F + +D L +P++ +YN ++ + + +
Sbjct: 155 LLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQL 214
Query: 245 LDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
+ EA F M VK + D +Y ++ GKL E
Sbjct: 215 VSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKE 252
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 153/321 (47%), Gaps = 21/321 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG--M 62
G D V Y+ ++ GF ++GDSD + + E+ ++ G++ D V Y S++ KG M
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR--GILPDVVTYSSIIAA-LCKGQAM 247
Query: 63 EEEAMECYNEAVGENSS---------VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE 113
++ C V E+ VK + ++++D C GK DEA+KL M +
Sbjct: 248 DKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSV 307
Query: 114 HNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
P N +++ + +GYC R +DA+ +F++M SPD +++N ++ L +
Sbjct: 308 GLKP-----NTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTR 362
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
A A+ELY +++ G + TY +++ + DD F+ + L+ +N
Sbjct: 363 RTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFN 422
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
++ L++VG DEAK F L + +Y+ M + + G L+E+ ++ ++D
Sbjct: 423 IMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS-MED 481
Query: 293 GGIEFSEELQEFVKGELSKEG 313
G + F+ EL + G
Sbjct: 482 NGCTVDSGMLNFIVRELLQRG 502
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 18/218 (8%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G C R DA++ V R+M E C P+ S+NNL++ LC EA EL
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHM 183
Query: 185 MSDK---GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M+D G PD +Y +++ F+ D + + +M+D G+ P++ Y+ ++ L +
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 243
Query: 242 VGMLD------------EAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGG 288
+D E++ FD+MV+ +K D +Y ++ GK+DE ++++ G
Sbjct: 244 GQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSG 303
Query: 289 ILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
++ G + + G K R E+ + L ++ E
Sbjct: 304 MVSVGLKPNTVTYSTLING-YCKISRMEDALVLFKEME 340
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 19/248 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDG-----VVYGSLMK 55
M G D + YS L+ G+ G D +L L G+VS G V Y +L+
Sbjct: 269 MVRIGVKPDIITYSTLIDGYCLAGKMDEAMKL-------LSGMVSVGLKPNTVTYSTLIN 321
Query: 56 GYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
GY E+A+ + E E+S V + N +L L + A +L+ R+
Sbjct: 322 GYCKISRMEDALVLFKEM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 379
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
+ L ++N++ G C DA+++F+ + + +FN +ID L K G
Sbjct: 380 -----QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 434
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
EA++L+ S G+ P+ +TY L+ + +++ F M D+G + + N +
Sbjct: 435 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 494
Query: 236 VGKLVQVG 243
V +L+Q G
Sbjct: 495 VRELLQRG 502
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V PD TYG+L+ C R+D G ++ G R +
Sbjct: 66 AAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITF 125
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASYKFMMKALSDGGKLDEILEIVG 287
L+ L +A DI+++++ + SY ++ L D + E LE++
Sbjct: 126 TPLLKGLCADKRTSDA---MDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLH 182
Query: 288 GILDDGG 294
+ DD G
Sbjct: 183 MMADDRG 189
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 127/254 (50%), Gaps = 9/254 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VA+ Y+ L+ G ++G F ++E+++E GV + Y +M G +
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED--GVFPNLYTYNCVMNQLCKDGRTK 285
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + ++E V + V N+++ LC K +EA K+ D+MK++ P NL
Sbjct: 286 DAFQVFDEM--RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP-----NL 338
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG+CG G+ A+ + R + SP +++N L+ C+ G + A ++ E
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++G+ P + TY +L+D + ++ M + GL P++ Y+ L+ G
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 245 LDEAKSFFDIMVKK 258
++EA F MV+K
Sbjct: 459 MNEASRLFKSMVEK 472
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 106/207 (51%), Gaps = 7/207 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +L + + F++ F+ K+ ++ +++ SF ++ G C G + + ++
Sbjct: 133 NYLLTFVVGSSSFNQWWSFFNENKS------KVVLDVYSFGILIKGCCEAGEIEKSFDLL 186
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
++ E+ SP+ + + LID CK G + +A++L+ EM G+ +E TY +L++ F+
Sbjct: 187 IELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKN 246
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
G + KM + G+ PNL YN ++ +L + G +A FD M ++ + + +Y
Sbjct: 247 GVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTY 306
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDG 293
++ L KL+E ++V + DG
Sbjct: 307 NTLIGGLCREMKLNEANKVVDQMKSDG 333
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V Y+ L+ GF R GD+ G ++ +E++E+ G+ V Y L+ +
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER--GIKPSKVTYTILIDTFARSDNM 424
Query: 64 EEAMECY--NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E+A++ E +G V +V ++ C G+ +EA +LF M ++ P +
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSV----LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVI 480
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+N M GYC +G A+++ ++M E +P+ S+ +I+ LCK EAE L
Sbjct: 481 -----YNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Query: 182 YGEMSDKGVNPDEYTYGLLMDA 203
+M D G++P L+ A
Sbjct: 536 VEKMIDSGIDPSTSILSLISRA 557
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 9/227 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + Y+ L+ GF G L +LK + G+ V Y L+ G+ KG
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR--GLSPSLVTYNILVSGFCRKGDTS 390
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + E E +K S V ++D + ++A++L R+ E L ++
Sbjct: 391 GAAKMVKEM--EERGIKPSKVTYTILIDTFARSDNMEKAIQL--RLSMEE---LGLVPDV 443
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++V+ G+C +G+ +A +F+ M E C P+ + +N +I CK G A +L E
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
M +K + P+ +Y +++ + + + KM+DSG+ P+ ++
Sbjct: 504 MEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 127/250 (50%), Gaps = 9/250 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF + V Y+ ++ F ++G D L EE+ K G+ + Y ++ G
Sbjct: 359 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK--GLTLNSQGYNGMIYALCKDGRM 416
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAM E + + + + N+++ LCNN + +EA +F+ + E + N
Sbjct: 417 DEAMGLIQEMRSQGCNPDICSY--NTIIYHLCNNEQMEEAEHMFENLLEEG-----VVAN 469
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + GR++DA+ + ++M + CS D +S+N LI +CK+G + + L
Sbjct: 470 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 529
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM++KG+ P+ +Y +L+ + RV D ++M++ GL P++ YN L+ L ++G
Sbjct: 530 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 589
Query: 244 MLDEAKSFFD 253
+ A + +
Sbjct: 590 WMHAALNLLE 599
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 129/301 (42%), Gaps = 11/301 (3%)
Query: 35 ELKEKLG--GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLD 92
EL E +G G D Y LM G G A+ E E + V VL
Sbjct: 316 ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM--EKKGFAPNVVTYTIVLH 373
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
+ C NG +D+ L + M K L +N +N M C GR +A+ + ++M
Sbjct: 374 SFCKNGMWDDTRALLEEMSA-----KGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 428
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
C+PD S+N +I LC N + EAE ++ + ++GV + TY ++ A R D
Sbjct: 429 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQD 488
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
++M+ G ++ YN L+ + + G +D + + M +K +K ++ SY ++
Sbjct: 489 AVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILIS 548
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAE 331
L ++ + LE+ +L+ G + G L K G + L+EK E
Sbjct: 549 ELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING-LCKMGWMHAALNLLEKLHNENVH 607
Query: 332 A 332
Sbjct: 608 P 608
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ ++ + + +FE L E+ GVV++G+ Y +++
Sbjct: 426 MRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE--GVVANGITYNTIIHALLRD 483
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ E + S + V+ N ++ A+C +G D +L L + M K +
Sbjct: 484 GRWQDAVRLAKEMILHGCS--LDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE-----KGI 536
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N S+N++ C + R +DA+E+ ++M +PD +++N LI+ LCK G + A
Sbjct: 537 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 596
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
L ++ ++ V+PD TY +L+ +V +DD A +
Sbjct: 597 LLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 635
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 139/333 (41%), Gaps = 40/333 (12%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
R G +D L + G V D V+Y +++ +G EA NE + +
Sbjct: 169 LCRLGRADEALALLRGMARH--GCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCA 226
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA------------------ 121
++ + V+ +C G+ EA +L DRM + P +
Sbjct: 227 ADVNTF--DDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 284
Query: 122 --------VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
+N+ FN + G +G+ +A E++ MG C PD +++ L+ LCK G
Sbjct: 285 AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG 344
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
+ A L EM KG P+ TY +++ + + DD +M GL N YN
Sbjct: 345 RIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 404
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
++ L + G +DEA M + D SY ++ L + +++E + +L++
Sbjct: 405 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 464
Query: 293 G----GIEFSEELQEFVKGELSKEGREEEVVKL 321
G GI ++ + + ++GR ++ V+L
Sbjct: 465 GVVANGITYNTIIHALL-----RDGRWQDAVRL 492
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 100/256 (39%), Gaps = 62/256 (24%)
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPKRL------------------------------AV 122
ALC G+ DEAL L M P + A
Sbjct: 168 ALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA 227
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCK----------- 171
++ +F+ + G CG GR ++A + +M C P +++ L+ LC+
Sbjct: 228 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 287
Query: 172 --------------------NGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
G LAEA ELY M KG PD +TY +LM ++ R+
Sbjct: 288 GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIG 347
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMM 270
R+M G PN+ Y ++ + GM D+ ++ + M K L ++ Y M+
Sbjct: 348 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 407
Query: 271 KALSDGGKLDEILEIV 286
AL G++DE + ++
Sbjct: 408 YALCKDGRMDEAMGLI 423
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 8/223 (3%)
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
L+ RM + R+ +F V A C GR +A+ + R M + C PD + + +
Sbjct: 145 LYRRMVHR----DRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTV 200
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
I LC G + EA L EM G D T+ ++ + RV + A +M+ G
Sbjct: 201 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 260
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
P + Y L+ L +V DEA++ + +++ + ++ GKL E E+
Sbjct: 261 MPGVMTYGFLLQGLCRVRQADEARAMLG---RVPELNVVLFNTVIGGCLAEGKLAEATEL 317
Query: 286 VGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
+ G + + G L K GR V+L+ + E++
Sbjct: 318 YETMGLKGCQPDAHTYSILMHG-LCKLGRIGSAVRLLREMEKK 359
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 10/287 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + Y+ L+ G R G L +E+ + +V DG Y L G
Sbjct: 257 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ--KMVPDGFTYSILFDGLSRN 314
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + + + +++ + V + + +L+ LC +GK A ++ + N P R+
Sbjct: 315 GDSKAMLSLFGKSL--KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 372
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N + +GYC G + A F +M PD +++N LI+ LCK + A++
Sbjct: 373 I-----YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 427
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM D GVNP T+ L+DA +++ +M ++GL+PN+ Y +V
Sbjct: 428 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 487
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDAS-YKFMMKALSDGGKLDEILEIV 286
+ G + EA + D M K + +A Y ++ A + G D+ +V
Sbjct: 488 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 534
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 148/359 (41%), Gaps = 44/359 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLF--------------------------- 33
M + V D YS L G R+GDS + LF
Sbjct: 292 MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGK 351
Query: 34 ----EELKEKL--GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
EE+ + L G+V V+Y +L+ GY G E A + + ++ +K +
Sbjct: 352 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM--KSRHIKPDHITY 409
Query: 88 NSVLDALCNNGKFDEALKLFDRMK-NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N++++ LC + A L M+ N NP + +FN + D Y G+ + V
Sbjct: 410 NALINGLCKAERITNAQDLLMEMQDNGVNP------TVETFNTLIDAYGRTGQLEKCFIV 463
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
+M E P+ +S+ ++++ CKNG + EA + +M K V P+ Y ++DA E
Sbjct: 464 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 523
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDAS 265
D KM +G+ P++ YN L+ L + EA+ + + +L D S
Sbjct: 524 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 583
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
Y ++ A G +D+ L++ + G + + G L GR E+ L +K
Sbjct: 584 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG-LGGAGRLIEMEYLYQK 641
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 136/307 (44%), Gaps = 41/307 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY------- 57
G V V+Y+ L+ G+ + G+ +G F F ++K + + D + Y +L+ G
Sbjct: 366 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR--HIKPDHITYNALINGLCKAERIT 423
Query: 58 ----FMKGMEE----EAMECYNEAVG------------------ENSSVKMSAVANNSVL 91
+ M++ +E +N + + + +K + V+ S++
Sbjct: 424 NAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIV 483
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+A C NGK EA+ + D M + K + N +N + D Y G A + KM
Sbjct: 484 NAFCKNGKIPEAVAILDDMFH-----KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 538
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
SP +++N LI LC ++EAEE+ +S+ + PD +Y L+ AC +D
Sbjct: 539 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 598
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMM 270
++M G++ + Y++L+ L G L E + + M++ + +A + M+
Sbjct: 599 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMV 658
Query: 271 KALSDGG 277
+A S G
Sbjct: 659 EAYSKYG 665
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 6/200 (3%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMG-EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N G +A+ + R+MG + P+ S+N +I + + G +A E++ E
Sbjct: 162 AWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDE 221
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+++ V P+ TY ++D + ++ G + +MV GL+PN YN L+ L + G
Sbjct: 222 MTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGR 281
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+ E + D M +K+ D +Y + LS G +L + G L + G+ +
Sbjct: 282 MGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKN-GVTIGDYTCS 340
Query: 304 FVKGELSKEGR---EEEVVK 320
+ L K+G+ EEV++
Sbjct: 341 ILLNGLCKDGKVSIAEEVLQ 360
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF K + + VY+ ++ +V G +D F L E++K G+ V Y L+KG +
Sbjct: 502 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN--GISPSIVTYNLLIKGLCNQ 559
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA E N N + AV+ N+++ A C G D+AL L RM +
Sbjct: 560 SQISEAEEIINSL--SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHK-----YGI 612
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +++ + G G GR + +++KM + P N +++ K G +AE+
Sbjct: 613 KSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 672
Query: 181 LYGEMSDKGVNPDE 194
L EM K N D+
Sbjct: 673 LRKEMLQKRNNHDD 686
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 151/338 (44%), Gaps = 20/338 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDG-----VVYGSLMKGYF 58
+G D V YS L+ F R G RL + + EK ++S G VVY SL+ G+
Sbjct: 468 QGVRPDVVTYSTLISAFCRMG------RLADAM-EKFSQMISIGLEPNTVVYHSLIHGFC 520
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
M G +A E +E + + + + V +S++ +LCN G+ +A +F+ + + + P
Sbjct: 521 MHGDLVKAKELVSEMMSKGIP-RPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRP- 578
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ +FN + DGYC G+ + A V M PD +++N L+ CK+G + +
Sbjct: 579 ----TIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDG 634
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
L+ EM K V P TY +++D F R F +M+DSG ++ Y L+
Sbjct: 635 LILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKG 694
Query: 239 LVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
L + + DEA + F + K D ++ AL + +E ++ I G +
Sbjct: 695 LCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPN 754
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
+ L KEG EE + E+ +R
Sbjct: 755 VSTYGVMIH-NLLKEGSVEEADTMFSSMEKSGCAPSSR 791
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V Y+ ++ + D + ++ +K GV DG+ Y +++ GY
Sbjct: 290 MVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDK--GVEPDGLTYTAIIHGYSCS 347
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +E+ + + + + + V NS + +LC +G+ +A ++F M + + P
Sbjct: 348 GHWKESAKMFRKMTSKG--LIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMP--- 402
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L S++++ GY +GRF D +F M + + FN LI K GM+ EA
Sbjct: 403 --DLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAML 460
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM +GV PD TY L+ A + R+ D F +M+ GL PN VY+ L+
Sbjct: 461 VFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFC 520
Query: 241 QVGMLDEAKSFFDIMVKK 258
G L +AK M+ K
Sbjct: 521 MHGDLVKAKELVSEMMSK 538
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 4/211 (1%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
A++ N+V+ +LC + + EAL + RM E R + ++ SFN + G+ QG A
Sbjct: 227 AISYNTVIKSLCGDSRSQEALDMVQRMAKEGG---RCSPDVVSFNTVIHGFFKQGEVSKA 283
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ +M + PD +++N+++D LCK + +AE + +M DKGV PD TY ++
Sbjct: 284 CNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHG 343
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD 263
+ A FRKM GL P + +N + L + G +A+ F M K M D
Sbjct: 344 YSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPD 403
Query: 264 -ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
SY ++ + G+ ++ + + D G
Sbjct: 404 LVSYSILLHGYATEGRFADMNNLFHSMADKG 434
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 52/326 (15%)
Query: 42 GVVSDGVVYGSLMK-------------------------------------GYFMKGMEE 64
G V + + Y +++K G+F +G
Sbjct: 222 GCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVS 281
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A NE V + V+ V NS++DALC D+A + +M ++ P L
Sbjct: 282 KACNLINEMVQKG--VEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGL---- 335
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + GY G +K++ ++FRKM P ++FN+ + LCK+G +AEE++
Sbjct: 336 -TYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ KG PD +Y +L+ R D F M D G+ N +N L+ + GM
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGM 454
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILE----IVGGILDDGGIEFSE 299
+DEA F M + ++ D +Y ++ A G+L + +E ++ L+ + +
Sbjct: 455 MDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHS 514
Query: 300 ELQEF-VKGELSKEGREEEVVKLMEK 324
+ F + G+L K +E V ++M K
Sbjct: 515 LIHGFCMHGDLVKA--KELVSEMMSK 538
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 130/277 (46%), Gaps = 10/277 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ L+ G+ G + F + + + G+ D V Y +L+ GY G ++ + +
Sbjct: 581 VTFNSLIDGYCLVGKMEKAFGVLDAMVSV--GIEPDVVTYNTLVSGYCKSGKIDDGLILF 638
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E + + VK + V + VLD L + G+ A K+F M + AV++ ++ ++
Sbjct: 639 REML--HKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGT-----AVDIDTYKIL 691
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C +AI +F K+G C D N +I+ L K EA +L+ +S G+
Sbjct: 692 LKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGL 751
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ TYG+++ + V++ T F M SG P+ + N ++ L+Q G + +A
Sbjct: 752 VPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGY 811
Query: 251 FFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+ + + ++ ++ +M S GK E ++ +
Sbjct: 812 YMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKFL 848
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 143/345 (41%), Gaps = 45/345 (13%)
Query: 9 DPVVYSYLMLGFVRDG--DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE-- 64
DP V + VR G +D LF+EL + G V + + G F+ +
Sbjct: 71 DPQVAFVAAIARVRAGTFSTDDAHHLFDELLRQ-GTPVHNPALNG------FLAALARAP 123
Query: 65 EAMEC----------YNEAVGENSSVKMSAVANNS---VLDALCNNGKFDEALKLFDRMK 111
+++ C +N E + +++ ++ ++ ++D C + D F R+
Sbjct: 124 DSVSCSNGPALVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARL- 182
Query: 112 NEHNPPKRLAVNLGSFNVMADGY----CGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLI 166
L L + + A+ + C R +A++V +M + C P+ +S+N +I
Sbjct: 183 --------LRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVI 234
Query: 167 DQLCKNGMLAEAEELYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
LC + EA ++ M+ +G +PD ++ ++ F+ V +MV G
Sbjct: 235 KSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKG 294
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
+ P++ YN +V L + +D+A+ MV K ++ D +Y ++ S G E
Sbjct: 295 VEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESA 354
Query: 284 EIVGGILDDGGIEFSEELQEFVKGELSKEGRE---EEVVKLMEKK 325
++ + G I F+ L K GR EE+ + M K
Sbjct: 355 KMFRKMTSKGLIPGIVTFNSFM-SSLCKHGRSKDAEEIFQYMTTK 398
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 40/216 (18%)
Query: 156 SPDTLSFNNLIDQLCKNG---MLAEAEELYGEMSDKGVNP-DEYTYGLLMDACFEVNRVD 211
+PD++S C NG +LA + E + V P +TYG+LMD C R D
Sbjct: 122 APDSVS--------CSNGPALVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPD 173
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASY 266
G +F +++ +GLR N + L DEA D+++ ++ + SY
Sbjct: 174 LGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEA---VDVLLHRMSDLGCVPNAISY 230
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGG------IEFSEELQEFVK-GELSK-------- 311
++K+L + E L++V + +GG + F+ + F K GE+SK
Sbjct: 231 NTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEM 290
Query: 312 --EGREEEVVKLMEKKEREKAEAKAREAEAAEAAKR 345
+G E +VV + A KAR + AE R
Sbjct: 291 VQKGVEPDVVTYNSIVD---ALCKARAMDKAELVLR 323
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 138/282 (48%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G A+ ++Y+ L+ G + +S+ L E+K K G+ D +YG+L++G +
Sbjct: 393 GVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK--GLELDISLYGALIQGLCNVHKLD 450
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + + S ++ + + +++DA +GK EA+ + ++ + P N+
Sbjct: 451 EAKSLLTKM--DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP-----NV 503
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG C G +AI F KM + P+ ++ L+D LCKNG L EA +L+ E
Sbjct: 504 ITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNE 563
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG++ D+ Y L+D + + D KM+DSGL+ +L Y + + M
Sbjct: 564 MVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNM 623
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ EA+ F M+ + D A Y ++ G L+E + +
Sbjct: 624 MPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 141/290 (48%), Gaps = 10/290 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D V ++ L+ G+ + G+ D V +L EE++ G +D V Y +L+ + G E
Sbjct: 218 GCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRR--SGCKADVVTYNALINCFCKFGRME 275
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + A + V + V ++ +DA C G EA+KLF +M+ + +A+N
Sbjct: 276 TAYGYF--AAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR-----VRGMALNE 328
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG C GR DAI + +M + +++ L+D LCK +AEAE++
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M GV +E Y L+ F + +M + GL ++++Y L+ L V
Sbjct: 389 MEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHK 448
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
LDEAKS M + L+ + Y MM A GK+ E + ++ ILD G
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 33/282 (11%)
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--------------- 117
A+G S S V +++L L + G D+A++ R++ PP
Sbjct: 113 ALGPRRSALASVV--DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARD 170
Query: 118 ------KRL-----AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
+RL A N+ +FN++ D C +G +A +F +M E C PD ++FN+LI
Sbjct: 171 RSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLI 230
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
D K G L E E+L EM G D TY L++ + R++ YF M G+
Sbjct: 231 DGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVM 290
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
N+ ++ V + G++ EA F M V+ + +++ +Y ++ G+LD+ + +
Sbjct: 291 ANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVL 350
Query: 286 VGGILDDGGIEFSEELQEFVKGELSKEGR---EEEVVKLMEK 324
+ ++ G V G L KE + E+V+++MEK
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDG-LCKERKVAEAEDVLRMMEK 391
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D VVY+ L+ G+++ G+ F L ++ + G+ D Y + G+
Sbjct: 564 MVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMID--SGLQLDLFCYTCFISGFCNL 621
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK 111
M EA E ++E +G + N ++ G +EA+ L D M+
Sbjct: 622 NMMPEAREVFSEMIGHG--IAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 127/283 (44%), Gaps = 47/283 (16%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
V+ N++LD LC GK +EA L MKN P R +FN++ GYC G K+A
Sbjct: 248 VSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNR-----NTFNILVSGYCKLGWLKEAA 302
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
+V M + PD ++N LI LCK+G + EA L EM + + PD TY L++ C
Sbjct: 303 QVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGC 362
Query: 205 FEVN-----------------------------------RVDDGATYFRKMVDSGLRPNL 229
F+ + ++D+ RKM +SG P+
Sbjct: 363 FDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDC 422
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGG 288
+N L+ + G L EA D M +K LKM+ + ++ L KLD+ +++
Sbjct: 423 VTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSS 482
Query: 289 ILDDGGIEFSEELQ--EFVKGELSKEGREEEVVKLM-EKKERE 328
G F +E+ + G K+G+ E +KL E KE+E
Sbjct: 483 ASKRG--YFVDEVSYGTLIMGYF-KDGKSVEAMKLWDEMKEKE 522
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 155/356 (43%), Gaps = 44/356 (12%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF-----MKGM 62
P V++Y ML G +DG D FRL +E+ E L ++ D V Y +L+ G F +KG
Sbjct: 315 PDVWTYNMLIGGLCKDGKIDEAFRLKDEM-ENL-KLLPDVVTYNTLINGCFDCSSSLKGF 372
Query: 63 EE-EAME---------CYNEAVG------------------ENSSVKMSAVANNSVLDAL 94
E + ME YN V E S V N++++
Sbjct: 373 ELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGY 432
Query: 95 CNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
C G+ EA ++ D M K L +N + N + CG+ + DA ++ +
Sbjct: 433 CKAGRLSEAFRMMDEMSR-----KGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRG 487
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
D +S+ LI K+G EA +L+ EM +K + P TY ++ + D
Sbjct: 488 YFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSI 547
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
++++SGL P+ YN ++ + G +++A F + MVKK K D + +++ L
Sbjct: 548 DKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGL 607
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREK 329
G LD+ L++ + G + + G L KE R EE L+ + E +K
Sbjct: 608 CTEGMLDKALKLFNTWISKGKAIDAVTYNTIISG-LCKEDRFEEAFDLLAEMEEKK 662
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 152/357 (42%), Gaps = 52/357 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK------------------------- 39
GF D V ++ L+ G+ + G FR+ +E+ K
Sbjct: 417 GFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDA 476
Query: 40 --------LGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
G D V YG+L+ GYF G EAM+ ++E + + S + N+++
Sbjct: 477 YKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEM--KEKEIIPSIITYNTMI 534
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
LC++GK D+++ + + P ++N + GYC +G+ + A + KM
Sbjct: 535 GGLCHSGKTDQSIDKLNELLESGLVPDE-----TTYNTIILGYCREGQVEKAFQFHNKMV 589
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ PD + N L+ LC GML +A +L+ KG D TY ++ + +R +
Sbjct: 590 KKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFE 649
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMK 271
+ +M + L P+ YN ++ L G + EA+ F +V++ K+ D + +
Sbjct: 650 EAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKR 709
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
+ + D + FSE++ EL +G+ ++ + ++++ ++
Sbjct: 710 KIESSSE-------TSQESDPNSVTFSEQI-----NELCTQGKYKDAMHMVQESTQK 754
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 83/155 (53%), Gaps = 1/155 (0%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
VN +FN++ G C + + +AI + KM ++ C PD +S+N ++D LCK G L EA +L
Sbjct: 210 VNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDL 269
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+M + G+ P+ T+ +L+ ++ + + A M + + P++ YN L+G L +
Sbjct: 270 LLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCK 329
Query: 242 VGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSD 275
G +DEA D M KL D +Y ++ D
Sbjct: 330 DGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFD 364
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 32/221 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V D Y+ ++LG+ R+G + F+ ++ +K D L++G +GM +
Sbjct: 557 GLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKK--SFKPDLFTCNILLRGLCTEGMLD 614
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A++ +N + + ++ AV N+++ LC +F+EA L M+ K+L +
Sbjct: 615 KALKLFNTWISKGKAI--DAVTYNTIISGLCKEDRFEEAFDLLAEMEE-----KKLGPDC 667
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGE-----------------------YRCSPDTLS 161
++N + GR K+A E ++ E P++++
Sbjct: 668 YTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVT 727
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
F+ I++LC G +A + E + KG+ + TY LM+
Sbjct: 728 FSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLME 768
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 9/212 (4%)
Query: 126 SFNVMAD----GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCK---NGMLAEA 178
S V+ D Y R A ++F +M P+ L+ N LI+ L + + +
Sbjct: 137 SLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLS 196
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ ++ ++ GV + T+ +L+ C N++ + KM D P+ YN ++
Sbjct: 197 KAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDV 256
Query: 239 LVQVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
L + G L+EA+ D+ L + ++ ++ G L E +++ ++ +
Sbjct: 257 LCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVI-DLMAQNNVLP 315
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKEREK 329
+ G L K+G+ +E +L ++ E K
Sbjct: 316 DVWTYNMLIGGLCKDGKIDEAFRLKDEMENLK 347
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 132/280 (47%), Gaps = 11/280 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ + G +G D L++ L E +D YG ++ G G A++ E
Sbjct: 361 YNIFLKGLFENGKVDDAMMLWDGLLE------ADSATYGVVVHGLCWNGYVNRALQVLEE 414
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A + + A +S+++ALC G+ DEA + + M + N NV+ D
Sbjct: 415 AEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNK-----RGCKFNSHVCNVLID 469
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G+ + A++VFR+M CS +S+N LI+ L + EA + EM +KG P
Sbjct: 470 GFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKP 529
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
D TY L+ +E N +D + + +D+G +P++ +YN ++ +L G +++A +
Sbjct: 530 DIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLY 589
Query: 253 DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
+ +K ++ ++ +M+ G + +I IL+D
Sbjct: 590 STLRQKKCVNLVTHNTIMEGFYKVGNCEMASKIWAHILED 629
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 154/328 (46%), Gaps = 19/328 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M+ G D + Y L+ G + GD +F+E++E+ GV D V Y ++ G+F +
Sbjct: 174 MWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRER--GVEPDVVCYNMIIDGFFKR 231
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
G +A E + + E V S V+ N ++ LC G+F E L++++RM KNE
Sbjct: 232 GDFVKAGEMWERLLRE-ELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERK---- 286
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+L +++ + G G A +V+ +M PD ++ N +++ LCK G + E
Sbjct: 287 --CDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECF 344
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ EM + + +Y + + FE +VDD + D L + A Y +V L
Sbjct: 345 ELWEEMGKCSLR-NVRSYNIFLKGLFENGKVDDAMMLW----DGLLEADSATYGVVVHGL 399
Query: 240 VQVGMLDEAKSFFDIMVKK---LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
G ++ A + + + +D+ +Y ++ AL G+LDE +V +++ G +
Sbjct: 400 CWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVV-ELMNKRGCK 458
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEK 324
F+ + + K + + VK+ +
Sbjct: 459 FNSHVCNVLIDGFVKHSKLDSAVKVFRE 486
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 151/362 (41%), Gaps = 55/362 (15%)
Query: 6 FVADPVVYSY--LMLGFVRDGD---SDGVFRLFEELKEKLGGVVSDGV-VYGSLMKGYFM 59
F P + S+ L+ FV ++ F+ FE + VS V Y LMK
Sbjct: 107 FGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAAR------VSPNVETYNVLMKVMCK 160
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
KG E+ G S + +++ + +G AL++FD M+ P
Sbjct: 161 KGEFEKGRGLLTWMWGAGMSP--DRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEP-- 216
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ +N++ DG+ +G F A E++ R + E P +S+N +I LCK G +E
Sbjct: 217 ---DVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEG 273
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E++ M D +TY L+ E + + +MV G+RP++ N ++
Sbjct: 274 LEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNG 333
Query: 239 LVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD------- 291
L + G ++E ++ M K + SY +K L + GK+D+ + + G+L+
Sbjct: 334 LCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSATYG 393
Query: 292 -------------------------DGGIEFSEELQEFVKGELSKEGREEE---VVKLME 323
+GG++ E + L KEGR +E VV+LM
Sbjct: 394 VVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMN 453
Query: 324 KK 325
K+
Sbjct: 454 KR 455
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V Y+ L+ G +R + E+ EK G D + Y +L+ G + M
Sbjct: 490 KGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEK--GWKPDIITYSTLIGGLYESNMM 547
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A+ +++ + ++ K + N V+ LC++GK ++AL+L+ ++ ++ VN
Sbjct: 548 DAALRLWHQFL--DTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLR------QKKCVN 599
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L + N + +G+ G + A +++ + E PD +S+N + LC G + +A
Sbjct: 600 LVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLD 659
Query: 184 EMSDKGVNPDEYTYGLLMDA 203
+ +G P T+ +L+ A
Sbjct: 660 DALVRGFLPTAITWNILVRA 679
>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 151/300 (50%), Gaps = 12/300 (4%)
Query: 28 GVFRLFEELKE-KLGGVVSDGVVYGSLMKGYFMKG-MEEEAMECYNEAVGENSSVKMSAV 85
G R E L++ + G D V Y SL+ +G E+ A+ YN + ++ +A+
Sbjct: 177 GTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNIL---SHGMEPNAI 233
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
NS+L +LC+ G +DE ++ MK +PP + ++N++ +G C G + AI
Sbjct: 234 TYNSLLHSLCSCGLWDEVDEILAIMKKTSHPP-----TVVTYNILINGLCKCGLVERAIN 288
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
F +M CSPD +++N L+ LCK GM+ EA +++ +SD +P TY ++D
Sbjct: 289 FFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLT 348
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDA 264
+D+ + +M++ G+ P+ + LV + +++A M K+ +++ +
Sbjct: 349 RRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSS 408
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+Y+ ++ L ++D ++++ ++ G + EE+ + ++ G EE +L +K
Sbjct: 409 AYRLVINGLCRNKRVDIAIQVLEMMI-SGRYKPDEEIYSTLIKSVADAGMVEEADELHQK 467
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 134/294 (45%), Gaps = 46/294 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGD-SDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
M ++G D V Y+ L+ ++G D ++ L G+ + + Y SL+
Sbjct: 188 MAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSH---GMEPNAITYNSLLHSLCS 244
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G+ +E E A+ + +S + V N +++ LC G + A+ F +M +E+ P
Sbjct: 245 CGLWDEVDEIL--AIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSP-- 300
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ ++N + C +G +A++VF + + CSP +++N +ID L + G + EA
Sbjct: 301 ---DIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEAL 357
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM--------------VDSGL 225
+LY +M +KG+ PD T+ L+ +++V+D R+M V +GL
Sbjct: 358 KLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGL 417
Query: 226 ---------------------RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+P+ +Y+ L+ + GM++EA ++++
Sbjct: 418 CRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKLIER 471
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 105/251 (41%), Gaps = 14/251 (5%)
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
NN +L LC G EA KL D M + P S N++ G GR + A
Sbjct: 24 TNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTC----STNLIR-GLVRIGRIERASR 78
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
V + M PD +++N ++ CK L A +L +MS G PD TY ++ + F
Sbjct: 79 VLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLF 138
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV--QVGMLDEAKSFFDIMVKKLKMDD 263
+ + D ++R + G P L Y L+ +LV G + + D+ ++ D
Sbjct: 139 DNGKFDQAVEFWRGQLRRGCLPYLIPYTILI-ELVWKHCGTVRALEVLEDMAIEGCYPDL 197
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVKGELSKEGREEEVV 319
+Y ++ S GK ++ I+ IL G I ++ L L E +E++
Sbjct: 198 VTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDE--VDEIL 255
Query: 320 KLMEKKEREKA 330
+M+K
Sbjct: 256 AIMKKTSHPPT 266
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G + G + F ++ + D + Y +L+ +GM +EA++ +
Sbjct: 268 VTYNILINGLCKCGLVERAINFFVQMVSE--NCSPDIITYNTLLTALCKEGMVDEALQVF 325
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA--------- 121
+ +S+ + N+V+D L G DEALKL+++M + P +
Sbjct: 326 --VLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFC 383
Query: 122 ---------------------VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
+N ++ ++ +G C R AI+V M R PD
Sbjct: 384 WIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEE 443
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
++ LI + GM+ EA+EL+ ++ ++ V
Sbjct: 444 IYSTLIKSVADAGMVEEADELHQKLIERKV 473
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 154/334 (46%), Gaps = 40/334 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF + V Y+ L+ G+ + + +G L++E+KE+ G+ D V + +L+ G
Sbjct: 518 MLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKER--GIYPDAVAFTALIDGLSKA 575
Query: 61 GMEEEAMECYNEAVGENSSVKMSAV-------ANNSVLDALCNNGKFDEALKLFDRMKNE 113
G EEA E + E MSA+ A NS++ LC+ G+ EALKL M+
Sbjct: 576 GNVEEAYEVFLE---------MSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQ- 625
Query: 114 HNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
K L + +FN++ DG+C +G+ K AIE F M PD +FN LI CK
Sbjct: 626 ----KGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAF 681
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
+ A E+ +M G++PD TY M + +++ +++ +G+ P+ YN
Sbjct: 682 DMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYN 741
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM-----------KALSDGGKLDEI 282
++ + +LD A ++K + + M+ KAL G KL EI
Sbjct: 742 TMLSGICS-DILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREI 800
Query: 283 L----EIVGGILDDGGIEFSEELQEFVKGELSKE 312
EI ILD +++ E V+G K
Sbjct: 801 SFGFDEISYRILDQAYCLMQDDV-ELVRGTYEKH 833
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 132/309 (42%), Gaps = 44/309 (14%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
SD V +L++G+ GM EA+E G +S++ L G +
Sbjct: 175 SDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLL--RIGDYGSVW 232
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
KLF M + P L +FN M G+C Q R + M ++ CSPD ++FN
Sbjct: 233 KLFKDMIFKGPRPSNL-----TFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNI 287
Query: 165 LID-----------------------------------QLCKNGMLAEAEELYGEMSDKG 189
LI+ LC+ G + EA +L+ + D G
Sbjct: 288 LINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMG 347
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ P+ Y LMD F+ V + + +M +G+ P+ +N LV + G ++++
Sbjct: 348 IAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSD 407
Query: 250 SFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGE 308
D++V L +D + Y M+ +L G+LDE ++++ +L+ G+ S + G
Sbjct: 408 RLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEK-GLTLSVVAFNSLIGA 466
Query: 309 LSKEGREEE 317
S+ G E++
Sbjct: 467 YSRAGLEDK 475
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 140/282 (49%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + +Y+ LM G+ + + L+EE++ GV D V + L+ G++ G E
Sbjct: 347 GIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTT--GVSPDCVTFNILVWGHYKYGRIE 404
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
++ + + S + + + + ++ +LC G+ DEA+KL + K L +++
Sbjct: 405 DSDRLLKDLI--VSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLE-----KGLTLSV 457
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN + Y G A E +R M +P + + N+L+ LC+ G L EA L
Sbjct: 458 VAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYR 517
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +KG ++ Y +L+D F++N ++ +++M + G+ P+ + L+ L + G
Sbjct: 518 MLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGN 577
Query: 245 LDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
++EA + F ++ ++ +Y +++ L D G++ E L++
Sbjct: 578 VEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKL 619
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 135/312 (43%), Gaps = 24/312 (7%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD V++LF+++ K G + + +++ G+ + + VGE+ M
Sbjct: 226 GDYGSVWKLFKDMIFK--GPRPSNLTFNAMICGFCRQ---------HRVVVGESLLHLMP 274
Query: 84 -------AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
V N +++A C G+ A+ M P ++ +F + C
Sbjct: 275 KFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEP-----SVATFTTILHALCR 329
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
+G +A ++F + + +P+ +N L+D K +A+A LY EM GV+PD T
Sbjct: 330 EGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVT 389
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIM 255
+ +L+ ++ R++D + ++ SGL + ++Y+ +V L G LDEA +++
Sbjct: 390 FNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELL 449
Query: 256 VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
K L + ++ ++ A S G D+ E ++ G S + G K +
Sbjct: 450 EKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQ 509
Query: 316 EEVVKLMEKKER 327
E + L E+
Sbjct: 510 EARILLYRMLEK 521
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 131/275 (47%), Gaps = 12/275 (4%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
P VY+Y + G + G++ LF++++E G + V Y L+ + E
Sbjct: 196 CQPTVYTYTTIINGLCKIGETTAAAGLFKKMEE--AGCQPNVVTYNILIDSLCKDKLVNE 253
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A++ ++ + S + NS++ LCN ++ EA L + M + + P N+
Sbjct: 254 ALDIFSYMKAKRISPDI--FTYNSLIQGLCNFRRWKEASALLNEMTSLNIMP-----NIF 306
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+FNV+ D C +G+ +A VF+ M E PD +++++L+ + EA +L+ M
Sbjct: 307 TFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAM 366
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
KG PD ++Y +L+ + R+D+ F +M+ GL P+ YN L+ L Q+G L
Sbjct: 367 ITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRL 426
Query: 246 DEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKL 279
EA+ F M + D +Y ++ G L
Sbjct: 427 REAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYL 461
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 48/270 (17%)
Query: 25 DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSA 84
++ GVF+ E+ GV D V Y SLM GY S++M
Sbjct: 323 EAQGVFKTMTEM-----GVEPDVVTYSSLMYGY---------------------SLRMEI 356
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
V EA KLFD M + P S+N++ GYC R +A
Sbjct: 357 V----------------EARKLFDAMITKGCKPDAF-----SYNILIKGYCKAKRIDEAK 395
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
++F +M +PD +++N LI LC+ G L EA++L+ M G PD +TY +L+D
Sbjct: 396 QLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGF 455
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDD 263
+ + FR M + L+P++A+YN L+ + + G L +A+ F ++ V+ L +
Sbjct: 456 CKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNV 515
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
Y ++ L G LDE LE + DG
Sbjct: 516 QIYTTIINNLCKEGLLDEALEAFRNMEGDG 545
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 98/192 (51%), Gaps = 6/192 (3%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
AV N++++ LC GKF +A++ FD + P + ++ + +G C G A
Sbjct: 165 AVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQP-----TVYTYTTIINGLCKIGETTAA 219
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+F+KM E C P+ +++N LID LCK+ ++ EA +++ M K ++PD +TY L+
Sbjct: 220 AGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQG 279
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
R + + +M + PN+ +N LV + + G + EA+ F M + ++ D
Sbjct: 280 LCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPD 339
Query: 263 DASYKFMMKALS 274
+Y +M S
Sbjct: 340 VVTYSSLMYGYS 351
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L+ ++ + +++ D + R A VF KM + PD ++FN LI+ LCK G A+A
Sbjct: 126 LSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAV 185
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
E + + G P YTY +++ ++ A F+KM ++G +PN+ YN L+ L
Sbjct: 186 EFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSL 245
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
+ +++EA F M K++ D +Y +++ L + + E
Sbjct: 246 CKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKE 288
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 9/225 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D Y+ L+ G+ + D +LF E+ + G+ D V Y +L+ G
Sbjct: 366 MITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQ--GLTPDNVNYNTLIHGLCQL 423
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + + + N ++ + +LD C G +A +LF M++ + P
Sbjct: 424 GRLREAQDLFKN-MHSNGNLP-DLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKP--- 478
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +N++ D C G KDA ++F ++ P+ + +I+ LCK G+L EA E
Sbjct: 479 --DIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALE 536
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+ M G PDE++Y +++ + A +M D G
Sbjct: 537 AFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGF 581
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE-ELYGEMSDKGVNPDEYTYGLL 200
DA+ F M P + F L+ + K G A L +M G++PD YT +L
Sbjct: 77 DALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSIL 136
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
+D + RVD + F KM+ GL+P+ +N L+ L +VG +A FFD
Sbjct: 137 IDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFD 189
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 77/187 (41%), Gaps = 7/187 (3%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR-CSPDT 159
D+AL F+ M H P + F + G++ A+ K E SPD
Sbjct: 76 DDALASFNHML--HREPLPCIIQ---FTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDI 130
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
+ + LID + A ++ +M G+ PD T+ L++ +V + +F
Sbjct: 131 YTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDD 190
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
SG +P + Y ++ L ++G A F M + + + +Y ++ +L
Sbjct: 191 FEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKL 250
Query: 279 LDEILEI 285
++E L+I
Sbjct: 251 VNEALDI 257
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 152/314 (48%), Gaps = 11/314 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ L+ GF +D + G R+F E++ + G+ + V Y L+ G
Sbjct: 219 MVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQ--GLRPNVVTYNILINGLCSD 276
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ ++ V +S ++ + V +N +++ C N +EA+ LF+ M+ + P
Sbjct: 277 GKVDEAVALRDQMV--SSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDP--- 331
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++ + D YC GR +DA ++ M + P+ ++N LI LC+ G + A
Sbjct: 332 --NAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARS 389
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM K ++ D TY +L+D+ + +M + GL P+ YN L+
Sbjct: 390 LMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYC 449
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G L A M +K K + ++ ++K G+L++ ++ +L+ G + +
Sbjct: 450 REGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVP-NR 508
Query: 300 ELQEFVKGELSKEG 313
E +K E+ ++G
Sbjct: 509 TTYEIIKEEMMEKG 522
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 129/257 (50%), Gaps = 18/257 (7%)
Query: 39 KLGGVVSDGVVYGSLMKGYFMKGM---EEEAMECYNEAVGENSSVKMSAVANNSVLDALC 95
K+ GV + + Y +L+ GY G +A E V + + + V N ++D C
Sbjct: 182 KVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAK--GICPNEVTYNILIDGFC 239
Query: 96 NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
+ A+++F M+ + P N+ ++N++ +G C G+ +A+ + +M
Sbjct: 240 KDENVSGAMRVFGEMQRQGLRP-----NVVTYNILINGLCSDGKVDEAVALRDQMVSSDL 294
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
P+ ++ N LI+ CKN + EA L+ +M +GV+P+ TY L+DA + R++D
Sbjct: 295 EPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFA 354
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALS 274
+ M+D G+ P ++ YN L+ L + G + A+S + MV KKL D +Y ++ +L
Sbjct: 355 LYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLC 414
Query: 275 DGGK-------LDEILE 284
G+ LDE+ E
Sbjct: 415 KKGESRKAVKLLDEMFE 431
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 144/299 (48%), Gaps = 27/299 (9%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE------KLGGVVSDGVVYGSLMKGYFM 59
F + ++ L+L FVR+ + R FE K KL + + ++ G +
Sbjct: 81 FCVNSILADMLVLAFVRNLK---ILRGFEAFKRAGDYGFKLSLISCNPLLSG------LV 131
Query: 60 KGMEEEAME-CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
K E ME Y E + ++++ ++ N V++ LC GK + A + + MK P
Sbjct: 132 KESENGDMEFVYREMI--KRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSP- 188
Query: 119 RLAVNLGSFNVMADGYCGQGRF---KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
N+ ++N + DGYC GR A + ++M P+ +++N LID CK+ +
Sbjct: 189 ----NVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENV 244
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+ A ++GEM +G+ P+ TY +L++ +VD+ +MV S L PN+ +N L
Sbjct: 245 SGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVL 304
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ + ++EA + F+ M K+ + + +Y ++ A G++++ + ++D G
Sbjct: 305 INGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 9/179 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + Y+ L+ G R GD L E+ K + +D V Y L+ K
Sbjct: 359 MIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK--KLSADVVTYNILIDSLCKK 416
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A++ +E + S V N+++D C G AL + RM+ K
Sbjct: 417 GESRKAVKLLDEMF--EKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMER-----KGK 469
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ + NV+ G+C +GR +DA + +M E P+ ++ + +++ + G + + E
Sbjct: 470 QANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPDIE 528
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 166/368 (45%), Gaps = 28/368 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF+KG V + V Y+ L+ G G D L E + + + V YG+L+ G +
Sbjct: 283 MFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS--SKCIPNDVTYGTLINGLVKQ 340
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A+ + E ++ + ++ L GK +EA+ L+ +M + P
Sbjct: 341 RRATDAVRLLSSM--EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP--- 395
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++V+ DG C +G+ +A E+ +M C P+ ++++L+ K G+ EA +
Sbjct: 396 --NIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQ 453
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM G + +++ Y +L+D V RV + + KM+ G++P+ Y+ ++ L
Sbjct: 454 VWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513
Query: 241 QVGMLDEAKSFFDIMV----KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG--- 293
+G +D A + M+ K + D +Y ++ L + ++++ +LD G
Sbjct: 514 GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDP 573
Query: 294 ----GIEFSEELQEFVKGELSKEGR---EEEVVKLMEKKEREKAEAKAREAEAAE--AAK 344
F L E K +GR EE VV+L+ K++R E + A K
Sbjct: 574 DVITCNTFLNTLSE--KSNSCDKGRSFLEELVVRLL-KRQRVSGACTIVEVMLGKYLAPK 630
Query: 345 RSARAAIA 352
S A I
Sbjct: 631 TSTWAMIV 638
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 141/287 (49%), Gaps = 10/287 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G PV+Y+ L+ G + GD V +L + + L G V + V Y +L+ G +KG +
Sbjct: 252 GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM--FLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ V +S + V ++++ L + +A++L M+ + +N
Sbjct: 310 KAVSLLERMV--SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE-----RGYHLNQ 362
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++V+ G +G+ ++A+ ++RKM E C P+ + ++ L+D LC+ G EA+E+
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G P+ YTY LM F+ ++ +++M +G N Y+ L+ L VG
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
+ EA + M+ +K D +Y ++K L G +D L++ +L
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 124/258 (48%), Gaps = 13/258 (5%)
Query: 29 VFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANN 88
VFR E K + DG Y +LM G + +EA+ +E E S S V N
Sbjct: 209 VFRGMPERK-----CLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP--SPVIYN 261
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
++D LC G KL D M + P N ++N + G C +G+ A+ +
Sbjct: 262 VLIDGLCKKGDLTRVTKLVDNMFLKGCVP-----NEVTYNTLIHGLCLKGKLDKAVSLLE 316
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+M +C P+ +++ LI+ L K +A L M ++G + +++ Y +L+ F+
Sbjct: 317 RMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEG 376
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYK 267
+ ++ + +RKM + G +PN+ VY+ LV L + G +EAK + M+ + +A +Y
Sbjct: 377 KAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYS 436
Query: 268 FMMKALSDGGKLDEILEI 285
+MK G +E +++
Sbjct: 437 SLMKGFFKTGLCEEAVQV 454
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 10/231 (4%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE----VFRKMGEYRCS 156
D+A+ LF RM +E R ++ SFN + + +G + +E V S
Sbjct: 129 DKAVDLFHRMVDEF----RCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNIS 184
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P+ LSFN +I LCK + A E++ M ++ PD YTY LMD + R+D+
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSD 275
+M G P+ +YN L+ L + G L D M +K ++ +Y ++ L
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 276 GGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
GKLD+ + ++ ++ I + G L K+ R + V+L+ E
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLING-LVKQRRATDAVRLLSSME 354
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 127/250 (50%), Gaps = 9/250 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF + V Y+ ++ F ++G D L EE+ K G+ + Y ++ G
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK--GLTLNSQGYNGMIYALCKDGRM 432
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAM E + + + + N+++ LCNN + +EA +F+ + E + N
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSY--NTIIYHLCNNEQMEEAEHMFENLLEEG-----VVAN 485
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + GR++DA+ + ++M + CS D +S+N LI +CK+G + + L
Sbjct: 486 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM++KG+ P+ +Y +L+ + RV D ++M++ GL P++ YN L+ L ++G
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 605
Query: 244 MLDEAKSFFD 253
+ A + +
Sbjct: 606 WMHAALNLLE 615
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 11/300 (3%)
Query: 35 ELKEKLG--GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLD 92
EL E +G G D Y LM G G A+ E E + V VL
Sbjct: 332 ELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM--EKKGFAPNVVTYTIVLH 389
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
+ C NG +D+ L + M K L +N +N M C GR +A+ + ++M
Sbjct: 390 SFCKNGMWDDTRALLEEMSA-----KGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 444
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
C+PD S+N +I LC N + EAE ++ + ++GV + TY ++ A R D
Sbjct: 445 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQD 504
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
++M+ G ++ YN L+ + + G +D + + M +K +K ++ SY ++
Sbjct: 505 AVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILIS 564
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAE 331
L ++ + LE+ +L+ G + G L K G + L+EK E
Sbjct: 565 ELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING-LCKMGWMHAALNLLEKLHNENVH 623
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ ++ + + +FE L E+ GVV++G+ Y +++
Sbjct: 442 MRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE--GVVANGITYNTIIHALLRD 499
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ E + S + V+ N ++ A+C +G D +L L + M + P +
Sbjct: 500 GRWQDAVRLAKEMILHGCS--LDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNV 557
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
S+N++ C + R +DA+E+ ++M +PD +++N LI+ LCK G + A
Sbjct: 558 -----SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 612
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
L ++ ++ V+PD TY +L+ +V +DD A +
Sbjct: 613 LLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 134/311 (43%), Gaps = 38/311 (12%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G V D V+Y +++ +G EA NE + + ++ + V+ +C G+
Sbjct: 205 GCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTF--DDVVRGMCGLGRVR 262
Query: 102 EALKLFDRMKNEHNPPKRLA--------------------------VNLGSFNVMADGYC 135
EA +L DRM + P + +N+ FN + G
Sbjct: 263 EAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCL 322
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+G+ +A E++ MG C PD +++ L+ LCK G ++ A L EM KG P+
Sbjct: 323 AEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVV 382
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
TY +++ + + DD +M GL N YN ++ L + G +DEA M
Sbjct: 383 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 442
Query: 256 VKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVKGELS 310
+ D SY ++ L + +++E + +L++G GI ++ + +
Sbjct: 443 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALL----- 497
Query: 311 KEGREEEVVKL 321
++GR ++ V+L
Sbjct: 498 RDGRWQDAVRL 508
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 10/250 (4%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGSFNVMADGYCGQG 138
V+ S + N VL L +AL L+ RM + PP +F V A C G
Sbjct: 135 VQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTF-----TFGVAARALCRLG 189
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
R +A+ + R M + C PD + + +I LC G + EA L EM G D T+
Sbjct: 190 RANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFD 249
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
++ + RV + A +M+ G P + Y L+ L +V DEA++ +
Sbjct: 250 DVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG---RV 306
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
+++ + ++ GKL E E+ + G + + G L K GR
Sbjct: 307 PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHG-LCKLGRISSA 365
Query: 319 VKLMEKKERE 328
V+L+ + E++
Sbjct: 366 VRLLREMEKK 375
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 166/342 (48%), Gaps = 14/342 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + D YS ++ ++G + +F LK GVV D +Y SL+ G+ +
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF--LKFLKTGVVPDVFLYNSLISGFCKE 674
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLD--ALCNNGKFDEALKLFDRMKNEHNPPK 118
G E+A + Y+E + ++ + + V N++++ C +G EA KLFD M ++ P
Sbjct: 675 GDIEKASQLYDEML--HNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPD 732
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ ++ DG +G + A+ +F + + + +FN+LID CK+G + EA
Sbjct: 733 GYI-----YCILIDGCGKEGNLEKALSLFHE-AQQKSVGSLSAFNSLIDSFCKHGKVIEA 786
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EL+ +M DK + P+ TY +L+DA + +++ F M + PN Y L+
Sbjct: 787 RELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLS 846
Query: 239 LVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
Q+G + S F D+ + + D +Y M A GK E L+++ L + GI+
Sbjct: 847 YNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVE-GIKL 905
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+++ + + L KE + V++L+ + +E+ ++
Sbjct: 906 EDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNT 947
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 146/324 (45%), Gaps = 15/324 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ ++ G + G+ LF E+ + G+ D Y L+ GY
Sbjct: 372 MITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML--MAGIEPDTWTYNLLIDGYLKS 429
Query: 61 GMEEEAMECYNEAVGENSSVKM--SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ A C E + E + K+ S + ++ LC++ +A ++ D+M P
Sbjct: 430 --HDMAKAC--ELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP- 484
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N+ + + Y + R++ AIE+ + M PD +N LI LC+ + EA
Sbjct: 485 ----NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA 540
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ L +M +KG+ P+ +TYG ++ + + YF+ M+ SG+ PN +Y L+
Sbjct: 541 KMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKG 600
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
VG EA S F M++K L D +Y ++ +LS GK E + + L G +
Sbjct: 601 HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPD 660
Query: 298 SEELQEFVKGELSKEGREEEVVKL 321
+ G KEG E+ +L
Sbjct: 661 VFLYNSLISG-FCKEGDIEKASQL 683
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 7/184 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+V+ A C G + + M+ E P NL ++N G C G +A+EV
Sbjct: 246 TNVIKAHCKVGDVIKGKMVLSEMEKECKP------NLFTYNAFIGGLCQTGAVDEALEVK 299
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ M E PD ++ L+D CK EA+ ++ M G+NP+ +TY L+D +
Sbjct: 300 KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE 359
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASY 266
+++ +M+ GL+ N+ YN ++G + + G + +A S F+ +++ ++ D +Y
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTY 419
Query: 267 KFMM 270
++
Sbjct: 420 NLLI 423
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 127/318 (39%), Gaps = 37/318 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + P YS L+ G D + +++ GV + +YG+L+K Y +
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR--NGVKPNVFMYGTLIKAYVQE 499
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E A+E + + V N ++ LC K +EA L M + P
Sbjct: 500 SRYEMAIELLKIMIA--NGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAH 557
Query: 121 A----VNLGS--------------------------FNVMADGYCGQGRFKDAIEVFRKM 150
+NL S + ++ G+C G +A+ F+ M
Sbjct: 558 TYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCM 617
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E PD +++ +I L KNG EA ++ + GV PD + Y L+ + +
Sbjct: 618 LEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDI 677
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGK--LVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
+ + + +M+ +G+ PN+ VYN L+ + G L EA FD M+ K + D Y
Sbjct: 678 EKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYC 737
Query: 268 FMMKALSDGGKLDEILEI 285
++ G L++ L +
Sbjct: 738 ILIDGCGKEGNLEKALSL 755
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 96/205 (46%), Gaps = 6/205 (2%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
++D C + EA +F+ M + P R ++ + DG+ +G ++A+ + +
Sbjct: 317 LVDGFCKQKRSKEAKLIFESMPSSGLNPNRF-----TYTALIDGFIKEGNIEEALRIKDE 371
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M + +++N +I + K G +A+A L+ EM G+ PD +TY LL+D + +
Sbjct: 372 MITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHD 431
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+ +M L P+ Y+ L+ L L +A D M++ +K + Y
Sbjct: 432 MAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGT 491
Query: 269 MMKALSDGGKLDEILEIVGGILDDG 293
++KA + + +E++ ++ +G
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANG 516
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 100/257 (38%), Gaps = 55/257 (21%)
Query: 78 SSVKMSA---VANNSVLDA-LCNNGKFDEALKLFDRMKNEHNPPKRL------------A 121
SS KMS + + S+L LCN+G +A + +++ PP +
Sbjct: 110 SSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGG 169
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
NL F++ D + G +A VF P + NNL+ L K M+ ++
Sbjct: 170 SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKV 229
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
YG M + + PD YTY ++ A +V V G +M + +PNL YN +G L Q
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQ 288
Query: 242 VGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEF 297
G +DE LE+ +++ G G +
Sbjct: 289 TG----------------------------------AVDEALEVKKLMMEKGLGPDGHTY 314
Query: 298 SEELQEFVKGELSKEGR 314
+ + F K + SKE +
Sbjct: 315 TLLVDGFCKQKRSKEAK 331
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + G+ V + +LM GY G
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A LFD M + K L N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLD-----KGLVPNG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG+ PD++TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ +K G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDK--GLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P +
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKF 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G +P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 104/263 (39%), Gaps = 49/263 (18%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFR--KMGEYRCSPDTLS-------------------- 161
+ F+ + Y G +DAIE +R K ++R DT
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 162 -------------FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
FN L+ K G + A+ ++ ++ G+ P ++ LM+ ++
Sbjct: 126 ENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
+++G M SG++P++ Y+ L+ L + +D+A FD M+ K L + ++
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFT 245
Query: 268 FMMKALSDGGKLDEILEIVGGIL 290
++ G++D +EI +L
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQML 268
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 17/289 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFR--LFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
GF + Y +LML + + V R LF + G V + + SL++ Y G+
Sbjct: 113 GFTHNDQSY-FLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAGL 171
Query: 63 EEEAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+E+++ +N ++VG + SV V NS+L L G+ + A +FD M + + +
Sbjct: 172 FQESVQVFNSMKSVGVSPSV----VTFNSLLLILLKRGRTNMAQSVFDEMLSTYG----V 223
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +FN++ G+C + F++M ++C PD +++N L+D LC+ G + A
Sbjct: 224 TPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHN 283
Query: 181 LYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ M K +NPD TY L+ + +D+ F +MV GL+PN YN L+
Sbjct: 284 VVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKG 343
Query: 239 LVQVGMLDEAKSFFDIMV--KKLKMDDASYKFMMKALSDGGKLDEILEI 285
L +V +D+ K F+ + D + +M A + G L++ LE+
Sbjct: 344 LCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEV 392
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 136/315 (43%), Gaps = 50/315 (15%)
Query: 6 FVADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
F DP V Y+ L+ G R G + + + +K + D V Y +L++GY MK
Sbjct: 256 FKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEI 315
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA+ + E V + +K + + N+++ LC K D+ ++F+ A+
Sbjct: 316 DEALVVFEEMVSK--GLKPNEITYNTLIKGLCEVQKIDKIKQIFEG-----------ALG 362
Query: 124 LGSF-------NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
G F N + + +C G DA+EVF KM PD+ +++ LI LC+ G
Sbjct: 363 GGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFE 422
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
AE+L+ E+S+K E+ DDG T P +A Y +
Sbjct: 423 RAEQLFDELSEK-----------------EILLRDDGCT-----------PLVAAYKSMF 454
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
L + G +A+ F ++K+ D S+K ++K G + E++ +L +
Sbjct: 455 EFLCRNGKTAKAERVFRQLMKRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVP 514
Query: 297 FSEELQEFVKGELSK 311
E Q + G L K
Sbjct: 515 DLETYQSLIDGLLQK 529
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 104/249 (41%), Gaps = 13/249 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF+ D + LM G+ + +FE++ + V D Y L++ +G E
Sbjct: 365 GFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMM--VLNVRPDSATYSVLIRNLCQRGNFE 422
Query: 65 EAMECYNE-----AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
A + ++E + + A S+ + LC NGK +A ++F ++ KR
Sbjct: 423 RAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLM------KR 476
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ SF ++ G+C +G F+ E+ M PD ++ +LID L + G A
Sbjct: 477 GTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAY 536
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ +M P+ T+ ++ + A + M++ +R N+ + V L
Sbjct: 537 QTLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLL 596
Query: 240 VQVGMLDEA 248
G+ D+A
Sbjct: 597 FGSGLRDKA 605
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + G+ V + +LM GY G
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A LFD M + K L N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLD-----KGLVPNG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG+ PD++TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ +K G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDK--GLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P +
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKF 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G +P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 104/263 (39%), Gaps = 49/263 (18%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTLRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFR--KMGEYRCSPDTLS-------------------- 161
+ F+ + Y G +DAIE +R K ++R DT
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 162 -------------FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
FN L+ K G + A+ ++ ++ G+ P ++ LM+ ++
Sbjct: 126 ENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
+++G M SG++P++ Y+ L+ L + +D+A FD M+ K L + ++
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFT 245
Query: 268 FMMKALSDGGKLDEILEIVGGIL 290
++ G++D +EI +L
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQML 268
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 11/279 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D V S L+ GF + L +++E G D V+Y +++ G G+
Sbjct: 75 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM--GFRPDVVIYNTIIDGSCKIGLVN 132
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+E ++ E V+ AV NS++ LC +G++ +A +L M P N+
Sbjct: 133 DAVELFDRM--ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP-----NV 185
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + D + +G+F +A++++ +M PD ++N+LI+ LC +G + EA+++
Sbjct: 186 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 245
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG PD TY L++ + RVD+G FR+M GL + YN ++ Q G
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 305
Query: 245 LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEIL 283
D A+ F M + + +Y ++ L ++++ L
Sbjct: 306 PDAAQEIFSRMDSRPNI--RTYSILLYGLCMNWRVEKAL 342
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 116/241 (48%), Gaps = 8/241 (3%)
Query: 46 DGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK 105
D V SL+ G+ +A++ ++ E + V N+++D C G ++A++
Sbjct: 79 DVVTVSSLINGFCQGNRVFDAIDLVSKM--EEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 136
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
LFDRM E + + AV ++N + G C GR+ DA + R M P+ ++F +
Sbjct: 137 LFDRM--ERDGVRADAV---TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 191
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
ID K G +EA +LY EM+ + V+PD +TY L++ RVD+ MV G
Sbjct: 192 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 251
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILE 284
P++ YN L+ + +DE F M ++ L D +Y +++ G+ D E
Sbjct: 252 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 311
Query: 285 I 285
I
Sbjct: 312 I 312
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 122/262 (46%), Gaps = 16/262 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++ V + + ++ ++ FV++G +L+EE+ + V D Y SL+ G M
Sbjct: 176 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC--VDPDVFTYNSLINGLCMH 233
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA + + V + V N++++ C + + DE KLF M + L
Sbjct: 234 GRVDEAKQMLDLMVTKGCLP--DVVTYNTLINGFCKSKRVDEGTKLFREMAQ-----RGL 286
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++N + GY GR A E+F +M P+ +++ L+ LC N + +A
Sbjct: 287 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALV 343
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M + D TY +++ ++ V+D FR + GL+P++ Y ++
Sbjct: 344 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 403
Query: 241 QVGMLDEAKSFFDIMVKKLKMD 262
+ D++ D++ +K++ D
Sbjct: 404 RKRQWDKS----DLLYRKMQED 421
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 47/227 (20%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + D V Y+ L+ GF + D +LF E+ ++ G+V D + Y ++++GYF
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR--GLVGDTITYNTIIQGYF-- 301
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G+ D A ++F RM + P
Sbjct: 302 -----------------------------------QAGRPDAAQEIFSRM--DSRP---- 320
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +++++ G C R + A+ +F M + D ++N +I +CK G + +A +
Sbjct: 321 --NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 378
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
L+ +S KG+ PD +Y ++ + D +RKM + GL P
Sbjct: 379 LFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S V + VL + + +D + LF H + +L S+N++ + C RF
Sbjct: 9 SIVDFSKVLSKIAKSKNYDLVISLF-----HHMEVCGIGHDLYSYNIVINCLCRCSRFVI 63
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ V KM ++ PD ++ ++LI+ C+ + +A +L +M + G PD Y ++D
Sbjct: 64 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 123
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML-DEAKSFFDIMVKKLKM 261
++ V+D F +M G+R + YN LV L G D A+ D++++ +
Sbjct: 124 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 183
Query: 262 DDASYKFMMKALSDGGKLDEILEI 285
+ ++ ++ GK E +++
Sbjct: 184 NVITFTAVIDVFVKEGKFSEAMKL 207
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 138/294 (46%), Gaps = 14/294 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V ++ LM G +G L + + E+ YG+++ G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEE------GHQPYGTIINGLCKM 54
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A+ ++ E + +K V N+++D LC +G A LF M ++ P
Sbjct: 55 GDTESALNLLSKM--EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFP--- 109
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ M D +C GR+ DA ++ R M E + +PD ++F+ LI+ L K G ++EAEE
Sbjct: 110 --DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEE 167
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+YG+M +G+ P TY ++D + +R++D M P++ ++ L+
Sbjct: 168 IYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC 227
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ +D F M ++ + + +Y ++ G LD +++ ++ G
Sbjct: 228 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 9/232 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
A V+Y+ ++ +DG LF E+ +K G+ D + Y ++ + G +A
Sbjct: 74 AHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK--GIFPDVITYSGMIDSFCRSGRWTDAE 131
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + + + V +++++AL GK EA +++ M P + ++
Sbjct: 132 QLLRDMI--ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI-----TY 184
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N M DG+C Q R DA + M CSPD ++F+ LI+ CK + E++ EM
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+G+ + TY L+ +V +D M+ SG+ PN + ++ L
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 132/291 (45%), Gaps = 10/291 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G D V Y L+ + G D F ++ GV + VV+ SL+ G
Sbjct: 473 HGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIND--GVTPNSVVFNSLVYGLCTVDRW 530
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A E + E + V+ + V N+++ LCN G+ A +L D M+ P N
Sbjct: 531 EKAEELFFEM--WDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRP-----N 583
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S+N + G+C GR +A ++ M PD +S++ L+ CK G + A L+
Sbjct: 584 VISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFR 643
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KGV P TY ++ F R + + M+ SG + ++ YN ++ L +
Sbjct: 644 EMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTN 703
Query: 244 MLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+DEA K F + K L+ + ++ M+ L GG+ + +++ I G
Sbjct: 704 CVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHG 754
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 10/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V Y+ ++ G + D + + + +K V D Y L+ GY
Sbjct: 295 MIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDK--DVKPDIQTYNCLIHGYLST 352
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +E + E + V + +LD LC NGK EA K+F M + P
Sbjct: 353 GEWKEVVRRLEEMYAR--GLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKP--- 407
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ + ++ GY +G D ++ M SP+ FN ++ K M+ EA
Sbjct: 408 --NVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMH 465
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ MS G++PD TYG+L+DA ++ RVDD F +M++ G+ PN V+N LV L
Sbjct: 466 IFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLC 525
Query: 241 QVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKALSDGGKL 279
V ++A+ FF++ + ++ + + +M L + G++
Sbjct: 526 TVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQV 565
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 138/312 (44%), Gaps = 10/312 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D YS L F R G + F F L K G V++ VV L+ G +EAM+
Sbjct: 89 DLCTYSILTGCFCRLGRIEHGFAAFG-LILKTGWRVNE-VVINQLLNGLCDAKRVDEAMD 146
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ E + + V+ N++L LCN + +EAL+L M + N+ ++N
Sbjct: 147 ILLRRMPEFGCMP-NVVSCNTLLKGLCNEKRVEEALELLHTMAEDGG--GNCTPNVVTYN 203
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ DG C A V + M + D ++++ +ID LCK + AE + M DK
Sbjct: 204 TIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDK 263
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
GV PD TY ++D + VD + M+D G++P++ YN ++ L + +D A
Sbjct: 264 GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 323
Query: 249 KSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEIL----EIVGGILDDGGIEFSEELQE 303
M+ K +K D +Y ++ G+ E++ E+ LD + +S L
Sbjct: 324 DGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDY 383
Query: 304 FVKGELSKEGRE 315
K E R+
Sbjct: 384 LCKNGKCTEARK 395
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 122/257 (47%), Gaps = 9/257 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M+ +G + V ++ +M +G RL + ++ GV + + Y +L+ G+ +
Sbjct: 540 MWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERV--GVRPNVISYNTLIGGHCLA 597
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA + + V + +K ++ +++L C G+ D A LF M + P +
Sbjct: 598 GRTDEAAQLLDVMV--SVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAV 655
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ + G RF +A E++ M + D ++N +++ LCK + EA +
Sbjct: 656 -----TYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFK 710
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ + K + P+ T+ +++D F+ R D F + GL PN+ Y ++ ++
Sbjct: 711 IFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNII 770
Query: 241 QVGMLDEAKSFFDIMVK 257
Q G+LDE + F M K
Sbjct: 771 QEGLLDEFDNLFLAMEK 787
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + Y L+ G+ + G D + LF E+ K GV V Y ++++G F
Sbjct: 610 MVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRK--GVTPGAVTYSTILQGLFHT 667
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA E Y + S + N +L+ LC DEA K+F + ++ P
Sbjct: 668 RRFSEAKELYLNMI--KSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRP--- 722
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +F +M D GR KDA+++F + + P+ +++ ++ + + G+L E +
Sbjct: 723 --NIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDN 780
Query: 181 LYGEMSDKGVNPD 193
L+ M G PD
Sbjct: 781 LFLAMEKSGCTPD 793
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 126/291 (43%), Gaps = 9/291 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVV-YGSLMKGYFMKGME 63
G + + V + L+ G + + L + E GG + VV Y +++ G
Sbjct: 156 GCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAV 215
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A + + VK+ V ++++D LC D A + M ++ P +
Sbjct: 216 DRAEGVLQHMI--DKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP-----D 268
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + DG C A V + M + PD +++N +ID LCK + A+ +
Sbjct: 269 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQ 328
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M DK V PD TY L+ + +M GL P++ Y+ L+ L + G
Sbjct: 329 HMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNG 388
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
EA+ F M++K +K + Y ++ + G + ++ +++ ++ +G
Sbjct: 389 KCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANG 439
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 113/248 (45%), Gaps = 9/248 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + Y+ L+ G G +D +L + + G+ D + Y +L++GY G +
Sbjct: 579 GVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSV--GLKPDLISYDTLLRGYCKTGRID 636
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + E + V AV +++L L + +F EA +L+ M ++
Sbjct: 637 NAYCLFREML--RKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQ-----QWDI 689
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ +G C +A ++F+ + P+ ++F +ID L K G +A +L+
Sbjct: 690 YTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFAS 749
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ G+ P+ TY ++M + +D+ F M SG P+ + N ++ L+ G
Sbjct: 750 IPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGE 809
Query: 245 LDEAKSFF 252
+ A ++
Sbjct: 810 IMRAGAYL 817
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 42/200 (21%)
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
D+ALKLFD + P A N NV+A C + A+ +F +M
Sbjct: 30 IDDALKLFDELLPHARPASVRAFN-HLLNVVARARCSSTS-ELAVSLFNRMA-------- 79
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
+ C N V PD TY +L + R++ G F
Sbjct: 80 --------RACSNK----------------VRPDLCTYSILTGCFCRLGRIEHGFAAFGL 115
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASYKFMMKALS 274
++ +G R N V N+L+ L +DEA DI+++++ + S ++K L
Sbjct: 116 ILKTGWRVNEVVINQLLNGLCDAKRVDEA---MDILLRRMPEFGCMPNVVSCNTLLKGLC 172
Query: 275 DGGKLDEILEIVGGILDDGG 294
+ +++E LE++ + +DGG
Sbjct: 173 NEKRVEEALELLHTMAEDGG 192
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 12/295 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF K + D Y+ L+ G++ G R+ +++ G +GV Y L+
Sbjct: 182 MFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRH--GQPPNGVTYSMLIDCLCKF 239
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
G EA E N + + ++ +L G E L D M +N P
Sbjct: 240 GGHTEAREILNSMIQSRGNPNVATYG--GLLHGYATKGDLVEMNNLIDLMVQNGVRPDHH 297
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ FN+ Y GR +A+ F KM + PD +S+ +ID LCK G L A
Sbjct: 298 I------FNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAM 351
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ +M D G++PD + L+ + + F +M+D G+RP + V+ ++ KL
Sbjct: 352 SQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKL 411
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G + EAK+ FD+M + +K + SY ++ GKLDE+L+++ +L G
Sbjct: 412 FKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVG 466
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + D + Y ++ G + G D F ++ + G+ D VV+ +L+ G+ M G
Sbjct: 325 QGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDD--GLSPDIVVFTNLIHGFSMYGKW 382
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A E + E + + ++ + V +++D L GK EA LFD M P + N
Sbjct: 383 EKAEELFYEMM--DRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLM-----PIASVKPN 435
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S+N + GY G+ + +++ M P+ ++FN L+D
Sbjct: 436 VVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLD---------------- 479
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+M G+ PD T L+D+C E R++D T FR+M+
Sbjct: 480 DMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREML 517
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 7/278 (2%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G A+ + ++ ++ + + + KLG D Y L+KG + E
Sbjct: 43 GLRANAISFTPILRTLCAEKRTSDAMNIVIRWTPKLG-CTPDVFSYTVLLKGLCDEKKCE 101
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA++ + + + V+ +V+ + +A LF M + PP ++
Sbjct: 102 EAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPP-----DV 156
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ N + DG C A EV R+M + PD ++N+L+ +G L EA + +
Sbjct: 157 VTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQ 216
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS G P+ TY +L+D + + M+ S PN+A Y L+ G
Sbjct: 217 MSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGD 276
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
L E + D+MV+ ++ D + + A G+LDE
Sbjct: 277 LVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDE 314
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L N SF + C + R DA+ V R + C+PD S+ L+ LC EA
Sbjct: 44 LRANAISFTPILRTLCAEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEA 103
Query: 179 EELYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+L M++ G P+ +Y ++ F+ + V T F +M+D G+ P++ N ++
Sbjct: 104 VDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSII 163
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG-- 293
L +V +D+A+ M K M D +Y ++ G+L E + I+ + G
Sbjct: 164 DGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQP 223
Query: 294 --GIEFSEELQEFVKGELSKEGRE 315
G+ +S + K E RE
Sbjct: 224 PNGVTYSMLIDCLCKFGGHTEARE 247
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 153/345 (44%), Gaps = 75/345 (21%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L++G+ + D D F++F E+ L G + V Y L+ G + +
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM--PLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 65 EAM---------ECY-------------------NEAVG-----ENSSVKMSAVANNSVL 91
EAM EC+ +EA+ E + +K + ++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE------ 145
D+LC+ KF++A +L +M K L N+ ++N + +GYC +G +DA++
Sbjct: 366 DSLCSQCKFEKARELLGQMLE-----KGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 146 ----------------------------VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
V KM E + PD +++N+LID C++G
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A L M+D+G+ PD++TY ++D+ + RV++ F + G+ PN+ +Y L+
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 238 KLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDE 281
+ G +DEA + M+ K + ++ ++ ++ L GKL E
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 133/288 (46%), Gaps = 15/288 (5%)
Query: 33 FEELKEKLG-----GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
FE+ +E LG G++ + + Y +L+ GY +GM E+A++ + E+ + +
Sbjct: 374 FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE--LMESRKLSPNTRTY 431
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N ++ C + +A+ + ++M +++ ++ ++N + DG C G F A +
Sbjct: 432 NELIKGYCKSN-VHKAMGVLNKMLE-----RKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M + PD ++ ++ID LCK+ + EA +L+ + KGVNP+ Y L+D +
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+VD+ KM+ PN +N L+ L G L EA + MVK L+ ++
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
++ L G D +L G + F++ +EGR
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ-TYCREGR 652
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 12/255 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + D V Y+ L+ G R G+ D +RL + ++ G+V D Y S++
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR--GLVPDQWTYTSMIDSLCKS 510
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA + ++ E V + V +++D C GK DEA + ++M +++ P L
Sbjct: 511 KRVEEACDLFDSL--EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+FN + G C G+ K+A + KM + P + LI +L K+G A
Sbjct: 569 -----TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +M G PD +TY + R+ D KM ++G+ P+L Y+ L+
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 241 QVGMLDEAKSFFDIM 255
+G + A FD++
Sbjct: 684 DLGQTNFA---FDVL 695
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 129/280 (46%), Gaps = 16/280 (5%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ L+ R G D + +++ E+ E V + Y ++ GY G EEA + +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLE--DKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+ V + + S++ C D A K+F+ M P K N ++ +
Sbjct: 243 KIV--EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM-----PLKGCRRNEVAYTHLI 295
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G C R +A+++F KM + C P ++ LI LC + +EA L EM + G+
Sbjct: 296 HGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 355
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P+ +TY +L+D+ + + +M++ GL PN+ YN L+ + GM+++A
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 252 FDIM-VKKLKMDDASYKFMMKALSDG------GKLDEILE 284
++M +KL + +Y ++K G L+++LE
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLE 455
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 105/243 (43%), Gaps = 31/243 (12%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNG-----------------KFDEALKLFD---R 109
++ + +N K S + S+L L NNG +AL + D +
Sbjct: 109 FSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRK 168
Query: 110 MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQL 169
M + + + +G +N + + G + +V+ +M E + P+ ++N +++
Sbjct: 169 MNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGY 228
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTY-GLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
CK G + EA + ++ + G++PD +TY L+M C + +D F +M G R N
Sbjct: 229 CKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYC-QRKDLDSAFKVFNEMPLKGCRRN 287
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-----SYKFMMKALSDGGKLDEIL 283
Y L+ L +DEA F K+K D+ +Y ++K+L + E L
Sbjct: 288 EVAYTHLIHGLCVARRIDEAMDLF----VKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 284 EIV 286
+V
Sbjct: 344 NLV 346
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 115/294 (39%), Gaps = 25/294 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY--- 57
M G D Y+ + + R+G + +++E GV D Y SL+KGY
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE--NGVSPDLFTYSSLIKGYGDL 685
Query: 58 --------FMKGME----EEAMECYNEAVGENSSVKM-SAVANNSVLDALCNNGKFDEAL 104
+K M E + + + +K + L A+ N +FD +
Sbjct: 686 GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR-CSPDTLSFN 163
+L ++M P N S+ + G C G + A +VF M SP L FN
Sbjct: 746 ELLEKMVEHSVTP-----NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFN 800
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
L+ CK EA ++ +M G P + +L+ ++ + G + F+ ++
Sbjct: 801 ALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQC 860
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDG 276
G + + ++ + + G+++ F++M K K +Y +++ D
Sbjct: 861 GYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEGPPDS 914
>gi|226494779|ref|NP_001147294.1| transferase, transferring glycosyl groups [Zea mays]
gi|195609598|gb|ACG26629.1| transferase, transferring glycosyl groups [Zea mays]
gi|414866930|tpg|DAA45487.1| TPA: hypothetical protein ZEAMMB73_715808 [Zea mays]
Length = 546
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 136/287 (47%), Gaps = 10/287 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V+Y ++ G R R+F E+K++ G DGV Y +++ G
Sbjct: 235 MIATGCTPDKVIYQRVIHGLFRRRMGGEALRVFREIKQR--GYDIDGVTYTTVIHGLCEM 292
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ A + ++E VG + + A S++ C G D+A K++D M K
Sbjct: 293 RLIGVAQQMWDEMVGRG--IAPNEYAYCSLVTYYCRVGDLDKARKVYDEMLE-----KGF 345
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
S N++ G+C GR DA+EVF +M D ++++ LI+ L K G L A
Sbjct: 346 KQTTVSCNILIKGFCVHGRVYDALEVFEEMSIKGIKHDVITYDTLINGLFKAGKLDLAMR 405
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+Y + G+ P T+G L+ A E +V + M GL P + + ++
Sbjct: 406 MYEWLLSSGLEPTSSTFGRLICAMCENGQVHAAVDLIKSMRTKGLEPPVWTNDHIISGFC 465
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIV 286
++ + DE ++ M+K ++ ++ +++++LS G+LD++L ++
Sbjct: 466 KINLSDEGMAWLAGMLKDNIRPQRQTFDYLVESLSTSGRLDDVLLVL 512
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
+ +G F + M C+PD + + +I L + M EA ++ E+ +G +
Sbjct: 218 AFAAEGNFGKVSDTLHLMIATGCTPDKVIYQRVIHGLFRRRMGGEALRVFREIKQRGYDI 277
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
D TY ++ E+ + + +MV G+ PN Y LV +VG LD+A+ +
Sbjct: 278 DGVTYTTVIHGLCEMRLIGVAQQMWDEMVGRGIAPNEYAYCSLVTYYCRVGDLDKARKVY 337
Query: 253 DIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
D M++K K S ++K G++ + LE+
Sbjct: 338 DEMLEKGFKQTTVSCNILIKGFCVHGRVYDALEV 371
>gi|413950866|gb|AFW83515.1| hypothetical protein ZEAMMB73_465290 [Zea mays]
Length = 478
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 149/327 (45%), Gaps = 24/327 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDS--DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF 58
M GF Y+ L+ D + + RLF + + D Y +++ G
Sbjct: 155 MRAAGFAPTAATYNVLLKAHCSDAAAHIEDALRLFRNIPKP------DVCSYNTIIDGLC 208
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+G EA++ ++E VG+ + + V +V+ L G FD+ALK+F M P
Sbjct: 209 RRGRLAEALDMFSEMVGK--CIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSP- 265
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
NL +++ + DG C GR A+E+ +M + + P+ ++++++ID LCK ML+EA
Sbjct: 266 ----NLVTYSSLIDGLCKGGRATSALELLDRMIKEKKLPNMITYSSVIDGLCKEHMLSEA 321
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY------ 232
E+ M +G PD +G L+ + R + A Y +MV +G+ PN +
Sbjct: 322 MEILDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNRVTWSLHARI 381
Query: 233 -NRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
N ++ L G L A + + + + D ++ ++++ S +++ +V +L
Sbjct: 382 NNTVLTALCDKGELGRAFQVYQSTRTRSISTDPTTFHLLVESFSKNN-IEKAARVVLDML 440
Query: 291 DDGGIEFSEELQEFVKGELSKEGREEE 317
+ I E + G SK+ +E
Sbjct: 441 SERCIPERETWDVIISGYWSKKKVRQE 467
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 9/191 (4%)
Query: 143 AIEVFRKMGEYRCSPDTL-SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
A+ +FR P + S+N ++ L + L A L +M G P TY +L+
Sbjct: 112 ALHLFRSAPSDLALPHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVLL 171
Query: 202 DA-CFE-VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
A C + ++D FR + +P++ YN ++ L + G L EA F MV K
Sbjct: 172 KAHCSDAAAHIEDALRLFRNIP----KPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKC 227
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
+ +Y ++ L+ G D+ L+I + G + G L K GR
Sbjct: 228 IAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDG-LCKGGRATSA 286
Query: 319 VKLMEKKEREK 329
++L+++ +EK
Sbjct: 287 LELLDRMIKEK 297
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 11/279 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D V S L+ GF + L +++E G D V+Y +++ G G+
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM--GFRPDVVIYNTIIDGSCKIGLVN 191
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+E ++ E V+ AV NS++ LC +G++ +A +L M P N+
Sbjct: 192 DAVELFDRM--ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP-----NV 244
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + D + +G+F +A++++ +M PD ++N+LI+ LC +G + EA+++
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG PD TY L++ + RVD+G FR+M GL + YN ++ Q G
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 245 LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEIL 283
D A+ F M + + +Y ++ L ++++ L
Sbjct: 365 PDAAQEIFSRMDSRPNI--RTYSILLYGLCMNWRVEKAL 401
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 8/245 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D V SL+ G+ +A++ ++ E + V N+++D C G +
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM--EEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A++LFDRM E + + AV ++N + G C GR+ DA + R M P+ ++
Sbjct: 192 DAVELFDRM--ERDGVRADAV---TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
F +ID K G +EA +LY EM+ + V+PD +TY L++ RVD+ MV
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
G P++ YN L+ + +DE F M ++ L D +Y +++ G+ D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 281 EILEI 285
EI
Sbjct: 367 AAQEI 371
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 122/262 (46%), Gaps = 16/262 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++ V + + ++ ++ FV++G +L+EE+ + V D Y SL+ G M
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC--VDPDVFTYNSLINGLCMH 292
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA + + V + V N++++ C + + DE KLF M + L
Sbjct: 293 GRVDEAKQMLDLMVTKGCLP--DVVTYNTLINGFCKSKRVDEGTKLFREMAQ-----RGL 345
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++N + GY GR A E+F +M P+ +++ L+ LC N + +A
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALV 402
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M + D TY +++ ++ V+D FR + GL+P++ Y ++
Sbjct: 403 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Query: 241 QVGMLDEAKSFFDIMVKKLKMD 262
+ D++ D++ +K++ D
Sbjct: 463 RKRQWDKS----DLLYRKMQED 480
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 47/227 (20%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + D V Y+ L+ GF + D +LF E+ ++ G+V D + Y ++++GYF
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR--GLVGDTITYNTIIQGYF-- 360
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G+ D A ++F RM + P
Sbjct: 361 -----------------------------------QAGRPDAAQEIFSRM--DSRP---- 379
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +++++ G C R + A+ +F M + D ++N +I +CK G + +A +
Sbjct: 380 --NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 437
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
L+ +S KG+ PD +Y ++ + D +RKM + GL P
Sbjct: 438 LFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S V + VL + + +D + LF H + +L S+N++ + C RF
Sbjct: 68 SIVDFSKVLSKIAKSKNYDLVISLF-----HHMEVCGIGHDLYSYNIVINCLCRCSRFVI 122
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ V KM ++ PD ++ ++LI+ C+ + +A +L +M + G PD Y ++D
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML-DEAKSFFDIMVKKLKM 261
++ V+D F +M G+R + YN LV L G D A+ D++++ +
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 262 DDASYKFMMKALSDGGKLDEILEI 285
+ ++ ++ GK E +++
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKL 266
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 93/225 (41%), Gaps = 45/225 (20%)
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
I++F KM + R P + F+ ++ ++ K+ L+ M G+ D Y+Y ++++
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113
Query: 204 CFEV-----------------------------------NRVDDGATYFRKMVDSGLRPN 228
NRV D KM + G RP+
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE----IL 283
+ +YN ++ ++G++++A FD M + ++ D +Y ++ L G+ + +
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 284 EIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
++V + I F+ + FV KEG+ E +KL E+ R
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFV-----KEGKFSEAMKLYEEMTRR 273
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 110 bits (275), Expect = 1e-21, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 128/282 (45%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G DP ++ L+ G +G LF+++ ++ G + V YG+L+ G G
Sbjct: 130 GHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE--GFQPNVVTYGTLINGLCKVGNTS 187
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ E + + V S++D+LC + + EA LF +M + P ++
Sbjct: 188 AAIRLLRSM--EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP-----DI 240
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + C +K + +M + PD + F+ ++D LCK G + EA E+
Sbjct: 241 FTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDM 300
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +GV PD TY LMD + +D+ F MV G P++ Y L+ ++
Sbjct: 301 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 360
Query: 245 LDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEI 285
+D+A F+ M +K + D +Y +M L G+L + + +
Sbjct: 361 IDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIAL 402
Score = 107 bits (267), Expect = 1e-20, Method: Composition-based stats.
Identities = 82/327 (25%), Positives = 136/327 (41%), Gaps = 41/327 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF + V Y L+ G + G++ RL +++ G D V+Y S++
Sbjct: 161 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ--GNCQPDVVIYTSIIDSLCKD 218
Query: 61 GMEEEAMECYNEAVGE---------------------------------NSSVKMSAVAN 87
EA +++ VG+ NS + V
Sbjct: 219 RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 278
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
++V+DALC GK EA ++ D M P ++ ++ + DG+C Q +A++VF
Sbjct: 279 STVVDALCKEGKVTEAHEIVDMMIQRGVEP-----DVVTYTTLMDGHCLQSEMDEAVKVF 333
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M +PD +S+ LI+ CK + +A L+ EM K PD TY LM V
Sbjct: 334 DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHV 393
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASY 266
R+ D F +MV G P+L Y+ L+ L + L+EA + I L D Y
Sbjct: 394 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVY 453
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDG 293
++ + G+L+ ++ + G
Sbjct: 454 NIIIDGMCRAGELEAARDLFSNLSSKG 480
Score = 103 bits (257), Expect = 1e-19, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 11/245 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V++S ++ ++G + + + ++ GV D V Y +LM G+ ++ +EA++
Sbjct: 274 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQR--GVEPDVVTYTTLMDGHCLQSEMDEAVK 331
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGSF 127
++ V ++ ++++ C K D+A+ LF+ M + E P + ++
Sbjct: 332 VFDMMV--RKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTK------TY 383
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + G C GR +DAI +F +M PD ++++ L+D LCKN L EA L +
Sbjct: 384 NTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEA 443
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+NPD Y +++D ++ F + GL P++ YN ++ L + G+L+E
Sbjct: 444 SNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNE 503
Query: 248 AKSFF 252
A F
Sbjct: 504 ANKLF 508
Score = 91.7 bits (226), Expect = 6e-16, Method: Composition-based stats.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 18/282 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF D + Y+ L+ G+ + D LFEE+ K + D Y +LM G
Sbjct: 336 MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK--EWIPDTKTYNTLMYGLCHV 393
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ ++E V + V + +LD+LC N +EA+ L ++ + P
Sbjct: 394 GRLQDAIALFHEMVARGQMPDL--VTYSILLDSLCKNRHLEEAMALLKAIEASNLNP--- 448
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +N++ DG C G + A ++F + P ++N +I LCK G+L EA +
Sbjct: 449 --DIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 506
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM +PD TY + + N +M+ G + +
Sbjct: 507 LFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADSC--------FL 558
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
+ +L E + I + + D ++FM L + K+ E+
Sbjct: 559 MLSVLSEDDRRYFIFIPE-GFDLLGWEFMRCKLKELAKIGEV 599
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 100 FDEALKLFDRMKNEHNPPK---------------------RLAVNLGSF---------NV 129
D+AL F+R+ + H PP L+ + SF N+
Sbjct: 46 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ + +C R A V K+ + PD +F LI LC G + EA L+ +M D+G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
P+ TYG L++ +V R M +P++ +Y ++ L + + EA
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225
Query: 250 SFFDIMV-KKLKMDDASYKFMMKALSD 275
+ F MV + + D +Y ++ AL +
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCN 252
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 143/327 (43%), Gaps = 50/327 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + YS L+ G + G +D F L +E+ + G D ++Y +L+ G +
Sbjct: 166 GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR--GFQPDVIMYNTLLNGLCKSRRLD 223
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+E + S + V NS+++ C + + D A +L M PP ++
Sbjct: 224 EALELVQLMI--RSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPP-----DV 276
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM------LAEA 178
++N + G C R DA + ++M RC PD ++++ +ID LCK+ L A
Sbjct: 277 INYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAA 336
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E+ M G P+ TY ++++ + R+M+DS + P+L+ ++ ++G
Sbjct: 337 CEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGS 396
Query: 239 LVQV-----------------------------------GMLDEAKSFFDIMVKKLKMDD 263
L + G +D+A F++MV+ +
Sbjct: 397 LCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGV 456
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGIL 290
A+Y ++ L G+++E + +V G++
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMI 483
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 131/276 (47%), Gaps = 9/276 (3%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
V + Y L+ G + G D + L +E++++ G+ V+ ++KG G +A
Sbjct: 27 VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR--GIPPGVAVHNGVIKGLCKAGRFGDA 84
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ + G + + + N ++DAL +G+ +EA ++F+ M H + L N+ +
Sbjct: 85 LGYFKTVAGTKCTPDI--ITFNILVDALVKSGRVEEAFQIFESM---HTSSQCLP-NVVT 138
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+ + +G C G+ AIE+ M E C P+ ++++ L++ LCK G + L EM+
Sbjct: 139 YTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMT 198
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+G PD Y L++ + R+D+ + M+ SG P + YN L+ + +D
Sbjct: 199 RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVD 258
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
A +M ++ D +Y ++ L +LD+
Sbjct: 259 RAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDD 294
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 17/292 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V Y+ LM F R D FRL + + E+ G D + Y +++ G
Sbjct: 232 MIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSER--GCPPDVINYNTVIAGLCRD 289
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKL------FDRMKNEH 114
++A + V + + ++++D LC + + D KL + MK
Sbjct: 290 ARLDDAQALLKQMVA--ARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG 347
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
PP N G++ V+ +G C + + A+ + R+M + PD SF+ +I LCK+
Sbjct: 348 CPP-----NAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHD 402
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L A +++G MS++ P+ Y L+D + VD F MV+S RP +A YN
Sbjct: 403 LDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNS 461
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI 285
++ L VG ++EA + M+ K D ASY +++ L ++E E+
Sbjct: 462 VLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYEL 513
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
S++ LC GK D+A +L D M++ PP + N + G C GRF DA+ F+
Sbjct: 35 SLIHGLCKAGKLDQAYELLDEMRDRGIPP-----GVAVHNGVIKGLCKAGRFGDALGYFK 89
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM-SDKGVNPDEYTYGLLMDACFEV 207
+ +C+PD ++FN L+D L K+G + EA +++ M + P+ TY +++ +
Sbjct: 90 TVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKD 149
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
++D M ++G PN+ Y+ LV L + G D+ + M ++ + D Y
Sbjct: 150 GKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMY 209
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDG 293
++ L +LDE LE+V ++ G
Sbjct: 210 NTLLNGLCKSRRLDEALELVQLMIRSG 236
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 12/260 (4%)
Query: 22 RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVK 81
R GD+ G F+ K D + + L+ G EEA + + E++ +S
Sbjct: 80 RFGDALGYFKTVAGTK-----CTPDIITFNILVDALVKSGRVEEAFQIF-ESMHTSSQCL 133
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
+ V +V++ LC +GK D A++L D M P N+ +++V+ +G C GR
Sbjct: 134 PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCP-----NVITYSVLVEGLCKAGRTD 188
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
+ ++M PD + +N L++ LCK+ L EA EL M G P TY LM
Sbjct: 189 KGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLM 248
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
+ +VD + M + G P++ YN ++ L + LD+A++ MV +
Sbjct: 249 ELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCV 308
Query: 262 DDA-SYKFMMKALSDGGKLD 280
D +Y ++ L ++D
Sbjct: 309 PDVITYSTIIDGLCKDWRVD 328
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G+ A+++FR E RC P+ ++ +LI LCK G L +A EL EM D+G+ P +
Sbjct: 12 GQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVH 68
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
++ + R D YF+ + + P++ +N LV LV+ G ++EA F+ M
Sbjct: 69 NGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHT 128
Query: 258 KLKM--DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
+ + +Y ++ L GKLD +E++ + + G V+G L K GR
Sbjct: 129 SSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEG-LCKAGRT 187
Query: 316 EEVVKLMEKKERE 328
++ L+++ R
Sbjct: 188 DKGFTLLQEMTRR 200
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEEL--KEKLGGVVSDGVVYGSLMK------GYFMKGMEE 64
Y+ ++ G R S L + E + + S +V GSL K Y + GM
Sbjct: 355 YAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMS 414
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E EC K + VA +++D L G+ D+A+++F+ M P +
Sbjct: 415 ER-EC-----------KPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRP------GV 456
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG CG GR ++A+ + M C PD S+ LI LC+ + EA EL+
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQA 516
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
+ KG + Y +L++ + R+ D K++++G +
Sbjct: 517 VEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 10/196 (5%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N L+ L G+ +A++LF +R N ++ + G C G+ A E+
Sbjct: 2 NCALNLLVRAGQHGQAVQLFRE--------ERCVPNEFTYGSLIHGLCKAGKLDQAYELL 53
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M + P N +I LCK G +A + ++ PD T+ +L+DA +
Sbjct: 54 DEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKS 113
Query: 208 NRVDDGATYFRKM-VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-S 265
RV++ F M S PN+ Y ++ L + G LD A D+M + + +
Sbjct: 114 GRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVIT 173
Query: 266 YKFMMKALSDGGKLDE 281
Y +++ L G+ D+
Sbjct: 174 YSVLVEGLCKAGRTDK 189
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 24/268 (8%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRL------FEELKEKLGGVVSDGVVYGSLMKGYFMK 60
V D + YS ++ G +D D ++L E +K+ G + Y +++G
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT--GCPPNAGTYAVVIEGLCRA 365
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A+ + +S V + + V+ +LC + D A K+F M P +
Sbjct: 366 RKSQQALALLRRMI--DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPV 423
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE-YRCSPDTLSFNNLIDQLCKNGMLAEAE 179
A + + DG G A+ VF M E +R P ++N+++D LC G + EA
Sbjct: 424 A-----YAALIDGLSKGGEVDKAVRVFELMVESFR--PGVATYNSVLDGLCGVGRIEEAV 476
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ M K PD +YG L+ V+ V++ F+ + G + VYN LV +L
Sbjct: 477 RMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNEL 536
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDDASYK 267
+ L +A + K+ +A YK
Sbjct: 537 CKKKRLSDAHGVAN------KLIEAGYK 558
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 138/280 (49%), Gaps = 13/280 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V + +LG+ + G + F+E+ + G++ + +Y L+ G+F G
Sbjct: 537 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDH--GLMPNNPLYTVLINGHFKAGNL 594
Query: 64 EEAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
EA+ + A+G V+ + + + L NG+ EALK+F +K K L
Sbjct: 595 MEALSIFRRLHALGVLPDVQTCS----AFIHGLLKNGRVQEALKVFSELKE-----KGLV 645
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ +++ + G+C QG + A E+ +M +P+ +N L+D LCK+G + A +L
Sbjct: 646 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 705
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ M +KG+ PD TY ++D + V + + F +M G++P+ VYN LV +
Sbjct: 706 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 765
Query: 242 VGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
G +++A + F M++K S+ ++ K+ E
Sbjct: 766 EGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQE 805
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 160/354 (45%), Gaps = 50/354 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG + +Y+ L+ G + GD +LF+ + EK G+ D V Y +++ GY
Sbjct: 674 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK--GLEPDSVTYSTMIDGYCKS 731
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA ++E + V+ + N+++ C G ++A+ LF M K
Sbjct: 732 ENVAEAFSLFHEM--PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ-----KGF 784
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A L SFN + DGYC + ++A ++F++M + PD +++ +ID CK G + EA
Sbjct: 785 ATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 843
Query: 181 LYGEMSD-----------------------------------KGVNPDEYTYGLLMDA-C 204
L+ EM + KGV PDE TYGL++ A C
Sbjct: 844 LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 903
Query: 205 FEVNRVDDGATYFR-KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
E N V+ A R ++V G+ +++ L+ L + L EA D M + LK
Sbjct: 904 KEDNLVE--AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPS 961
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
A+ ++++ + GK+DE + G+ G + + L + V G L+ E+
Sbjct: 962 LAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSED 1015
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 144/322 (44%), Gaps = 19/322 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + +YS ++ G + GD D L + EK G+V + Y + G
Sbjct: 257 KGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEK--GLVPNTYTYTIITAGLCRAKRM 314
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA + E + + +K A ++++D G DE L++ D M + P +N
Sbjct: 315 NEAKLTFEEM--QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIP-----IN 367
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L ++NV+ G C G+ + A E+ + M C P++ +F LI+ C+ + A EL
Sbjct: 368 LITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLD 427
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM + + P +YG +++ + KM SGL+PN+ VY+ L+ G
Sbjct: 428 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEG 487
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE----ILEIVGGILDDGGIEFS 298
++EA+ D M + D Y ++ LS GK++E +LEI G L + F
Sbjct: 488 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 547
Query: 299 EELQEFVKGELSKEGREEEVVK 320
F+ G SK G+ E K
Sbjct: 548 ----AFILG-YSKTGKMTEAAK 564
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 149/351 (42%), Gaps = 42/351 (11%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRL----------------------------FEEL 36
G D S L+ GF+R+GD D V R+ E+
Sbjct: 328 GLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKA 387
Query: 37 KEKLGGVVSDGV-----VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
E L G+V+ G + L++GY + A+E +E E ++ SAV+ +++
Sbjct: 388 AEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM--EKRNLVPSAVSYGAMI 445
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ LC+ A KL ++M P N+ ++++ Y +GR ++A + M
Sbjct: 446 NGLCHCKDLSLANKLLEKMTFSGLKP-----NVVVYSILIMAYASEGRIEEARRLLDGMS 500
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+PD +N +I L K G + EA E+ +G+ PD T+G + + ++
Sbjct: 501 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 560
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMM 270
+ A YF +M+D GL PN +Y L+ + G L EA S F + + D + +
Sbjct: 561 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFI 620
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
L G++ E L++ + + G + + G K+G E+ +L
Sbjct: 621 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG-FCKQGEVEKAFEL 670
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 7/242 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S V + ++D+ G DEA +F KN+ + ++L N + G +
Sbjct: 157 SPVVFDILIDSYKRMGMLDEAANVFFVAKND-----SILISLIRCNSLLKDLLKCGMMEL 211
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
+V+ M + + D ++ L+ LCK G L A+ + EM +KG+NP+E+ Y L+++
Sbjct: 212 FWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIE 271
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+V +D+ R M + GL PN Y + L + ++EAK F+ M K LK
Sbjct: 272 GMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKP 331
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
D + ++ G +DE+L I ++ GI + + L K G+ E+ ++
Sbjct: 332 DYNACSALIDGFMREGDIDEVLRI-KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEI 390
Query: 322 ME 323
++
Sbjct: 391 LK 392
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + + V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A +LFD M + P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y +KM+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E +KM + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + + F + LRP++ +N L+ +++G LD
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E + M ++ D +Y ++ L K+D+ E+ +LD+G + +
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 249 DGH-CKNGR 256
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 16/252 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + + L+LG G +LF E++ G + + L++G+FM G
Sbjct: 62 GLLPNASTMNTLLLGLCEIGQMSSALKLFREMQA--GPFLPTSASHNILLRGFFMAGRVR 119
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK----FDEALKLFDRMKNEHNPPKRL 120
+A+ + +SSV N VL LC K ++A++ F MK P
Sbjct: 120 DALAHLQDMRKSSSSVATGTY--NLVLKGLCWENKSANRLEQAMEFFKEMKASGVEP--- 174
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L S++++ GR +A +F M CSPD +++N L+D CK G EA+
Sbjct: 175 --DLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQS 229
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L E+ G P+ +TY ++++ ++++V++ F KM++S PN +N L+
Sbjct: 230 LMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFC 289
Query: 241 QVGMLDEAKSFF 252
+ GML++A F
Sbjct: 290 KAGMLEDAIKLF 301
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 136/283 (48%), Gaps = 17/283 (6%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG---GVVSDGVVYGSLMKGYFMKGME 63
V + V ++ L+ GF + G + +LF E+ EK+G +V+ + SL K +G
Sbjct: 275 VPNAVTFNTLIAGFCKAGMLEDAIKLFAEM-EKIGCKATIVTYNTLIDSLCKK---RGGV 330
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A++ +N+ E + + + V NS++ C+ + EA++ FD M+ + P N
Sbjct: 331 YTAVDLFNKL--EGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAP------N 382
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +++++ DG C R K+A + M + +P +++ LI+ CK G L A +
Sbjct: 383 VITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFE 442
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M G P+ + L+D + R +DG M G +P++ YN L+ L
Sbjct: 443 KMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSAN 502
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+++A+ FD M + ++ F+++ L K++E I+
Sbjct: 503 RVEDAQRLFDGMA--CAPNVTTFNFLIRGLCAQKKVEEARNIL 543
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N++L L + K D+AL+LF + P N ++NV+ G+C G+ A+ VF
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAP-----NAHTYNVLIRGFCKGGQMHQAVSVF 55
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M P+ + N L+ LC+ G ++ A +L+ EM P ++ +L+ F
Sbjct: 56 SDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMA 115
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ----VGMLDEAKSFFDIM-VKKLKMD 262
RV D + + M S YN ++ L L++A FF M ++ D
Sbjct: 116 GRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPD 175
Query: 263 DASYKFMMKALSDGGKLDE 281
SY ++ ALSD G++ E
Sbjct: 176 LESYHILLSALSDSGRMAE 194
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 141/296 (47%), Gaps = 12/296 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF + ++ L+ G R+ + L E++ ++ D Y ++++G F +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRR--NSLMPDVFSYNTVIRG-FCE 189
Query: 61 GME-EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G E E+A+E NE G S S V ++DA C GK DEA+ MK
Sbjct: 190 GKELEKALELANEMKGSGCS--WSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG----- 242
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L +L + + G+C G +F ++ E SP +++N LI CK G L EA
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
E++ M ++GV P+ YTY L+D V + + M++ PN YN ++ KL
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Query: 240 VQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+ G++ +A ++M K + + D+ +Y ++ L G LDE +++ +L D
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 134/287 (46%), Gaps = 14/287 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y+ L+ G GD D +L + + D + Y +L+ G + +A++
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 69 CYNEAVGENSSVKMSA---VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
Y+ V K+ A V N +L++ G ++A++L+ ++ + ++ N
Sbjct: 446 IYDLLVE-----KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDS-----KIVRNSD 495
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ M DG+C G A + KM P +N L+ LCK G L +A L+ EM
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
PD ++ +++D + + + M +GL P+L Y++L+ + +++G L
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
DEA SFFD MV + D ++K G+ D++ E+V ++D
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 78/205 (38%), Gaps = 37/205 (18%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
A N+ + N++ G C A+ + R+M PD S+N +I C+ L +A
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL EM G + T+G+L+DA
Sbjct: 198 ELANEMKGSGCSWSLVTWGILIDA-----------------------------------F 222
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ G +DEA F M L+ D Y +++ D G+LD + +L+ G +
Sbjct: 223 CKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 299 EELQEFVKGELSKEGREEEVVKLME 323
++G K G+ +E ++ E
Sbjct: 283 ITYNTLIRG-FCKLGQLKEASEIFE 306
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 143/327 (43%), Gaps = 50/327 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + YS L+ G + G +D F L +E+ + G D ++Y +L+ G +
Sbjct: 166 GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR--GFQPDVIMYNTLLNGLCKSRRLD 223
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+E + S + V NS+++ C + + D A +L M PP ++
Sbjct: 224 EALELVQLMI--RSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPP-----DV 276
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM------LAEA 178
++N + G C R DA + ++M RC PD ++++ +ID LCK+ L A
Sbjct: 277 INYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAA 336
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E+ M G P+ TY ++++ + R+M+DS + P+L+ ++ ++G
Sbjct: 337 CEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGS 396
Query: 239 LVQV-----------------------------------GMLDEAKSFFDIMVKKLKMDD 263
L + G +D+A F++MV+ +
Sbjct: 397 LCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGV 456
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGIL 290
A+Y ++ L G+++E + +V G++
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMI 483
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 17/292 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V Y+ LM F R D FRL + + E+ G D + Y +++ G
Sbjct: 232 MIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSER--GCPPDVINYNTVIAGLCRD 289
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKL------FDRMKNEH 114
++A + V + + ++++D LC + + D KL + MK
Sbjct: 290 ARLDDAQALLKQMVA--ARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG 347
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
PP N G++ V+ +G C + + A+ + R+M + PD SF+ +I LCK+
Sbjct: 348 CPP-----NAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHD 402
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L A +++G MS++ P+ Y L+D + VD F MV+S RP +A YN
Sbjct: 403 LDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNS 461
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI 285
++ L VG ++EA + M+ K D ASY +++ L ++E E+
Sbjct: 462 VLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYEL 513
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 131/276 (47%), Gaps = 9/276 (3%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
V + Y L+ G + G D + L +E++++ G+ V+ +++G G +A
Sbjct: 27 VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR--GIPPGVAVHNGVIRGLCKAGRFGDA 84
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ + G + + + N ++DAL +G+ +EA ++F+ M H + L N+ +
Sbjct: 85 LGYFKTVAGTKCTPDI--ITFNILVDALVKSGRVEEAFQIFESM---HTSSQCLP-NVVT 138
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+ + +G C G+ AIE+ M E C P+ ++++ L++ LCK G + L EM+
Sbjct: 139 YTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMT 198
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+G PD Y L++ + R+D+ + M+ SG P + YN L+ + +D
Sbjct: 199 RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVD 258
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
A +M ++ D +Y ++ L +LD+
Sbjct: 259 RAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDD 294
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
S++ LC GK D+A +L D M++ PP + N + G C GRF DA+ F+
Sbjct: 35 SLIHGLCKAGKLDQAYELLDEMRDRGIPP-----GVAVHNGVIRGLCKAGRFGDALGYFK 89
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM-SDKGVNPDEYTYGLLMDACFEV 207
+ +C+PD ++FN L+D L K+G + EA +++ M + P+ TY +++ +
Sbjct: 90 TVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKD 149
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
++D M ++G PN+ Y+ LV L + G D+ + M ++ + D Y
Sbjct: 150 GKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMY 209
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDG 293
++ L +LDE LE+V ++ G
Sbjct: 210 NTLLNGLCKSRRLDEALELVQLMIRSG 236
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 12/260 (4%)
Query: 22 RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVK 81
R GD+ G F+ K D + + L+ G EEA + + E++ +S
Sbjct: 80 RFGDALGYFKTVAGTK-----CTPDIITFNILVDALVKSGRVEEAFQIF-ESMHTSSQCL 133
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
+ V +V++ LC +GK D A++L D M P N+ +++V+ +G C GR
Sbjct: 134 PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCP-----NVITYSVLVEGLCKAGRTD 188
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
+ ++M PD + +N L++ LCK+ L EA EL M G P TY LM
Sbjct: 189 KGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLM 248
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
+ +VD + M + G P++ YN ++ L + LD+A++ MV +
Sbjct: 249 ELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCV 308
Query: 262 DDA-SYKFMMKALSDGGKLD 280
D +Y ++ L ++D
Sbjct: 309 PDVITYSTIIDGLCKDWRVD 328
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G+ A+++FR E RC P+ ++ +LI LCK G L +A EL EM D+G+ P +
Sbjct: 12 GQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVH 68
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
++ + R D YF+ + + P++ +N LV LV+ G ++EA F+ M
Sbjct: 69 NGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHT 128
Query: 258 KLKM--DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
+ + +Y ++ L GKLD +E++ + + G V+G L K GR
Sbjct: 129 SSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEG-LCKAGRT 187
Query: 316 EEVVKLMEKKERE 328
++ L+++ R
Sbjct: 188 DKGFTLLQEMTRR 200
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEEL--KEKLGGVVSDGVVYGSLMK------GYFMKGMEE 64
Y+ ++ G R S L + E + + S +V GSL K Y + GM
Sbjct: 355 YAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMS 414
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E EC K + VA +++D L G+ D+A+++F+ M P +
Sbjct: 415 ER-EC-----------KPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRP------GV 456
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG CG GR ++A+ + M C PD S+ LI LC+ + EA EL+
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQA 516
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
+ KG + Y +L++ + R+ D K++++G +
Sbjct: 517 VEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 10/196 (5%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N L+ L G+ +A++LF +R N ++ + G C G+ A E+
Sbjct: 2 NCALNLLVRAGQHGQAVQLFRE--------ERCVPNEFTYGSLIHGLCKAGKLDQAYELL 53
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M + P N +I LCK G +A + ++ PD T+ +L+DA +
Sbjct: 54 DEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKS 113
Query: 208 NRVDDGATYFRKM-VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-S 265
RV++ F M S PN+ Y ++ L + G LD A D+M + + +
Sbjct: 114 GRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVIT 173
Query: 266 YKFMMKALSDGGKLDE 281
Y +++ L G+ D+
Sbjct: 174 YSVLVEGLCKAGRTDK 189
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 24/268 (8%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRL------FEELKEKLGGVVSDGVVYGSLMKGYFMK 60
V D + YS ++ G +D D ++L E +K+ G + Y +++G
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT--GCPPNAGTYAVVIEGLCRA 365
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A+ + +S V + + V+ +LC + D A K+F M P +
Sbjct: 366 RKSQQALALLRRMI--DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPV 423
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE-YRCSPDTLSFNNLIDQLCKNGMLAEAE 179
A + + DG G A+ VF M E +R P ++N+++D LC G + EA
Sbjct: 424 A-----YAALIDGLSKGGEVDKAVRVFELMVESFR--PGVATYNSVLDGLCGVGRIEEAV 476
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ M K PD +YG L+ V+ V++ F+ + G + VYN LV +L
Sbjct: 477 RMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNEL 536
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDDASYK 267
+ L +A + K+ +A YK
Sbjct: 537 CKKKRLSDAHGVAN------KLIEAGYK 558
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 131/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F +DGD +F + + G+ V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHKFCKDGDIRVAQSVFNAITK--WGLRPSVVSFNTLMNGYIRLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + S V+ + +++ LC K D+A +LFD M + K L N
Sbjct: 189 EGFRL--KTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD-----KGLVPNG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LC+ G L +A +L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG- 243
MS KG+ PD+ TY L+D + ++ + ++M+ ++ + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGR 361
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
LD K +++ LK D +Y ++ G
Sbjct: 362 YLDAEKVLREMLSVGLKPDTITYTMIINEFCKKG 395
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ +K G+V +GV + +L+ G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDK--GLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D + + LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ PD TY ++++ + V G+ ++M G P++
Sbjct: 368 VLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G Y + +LM + + + F + GLRP++ +N L+ +++G
Sbjct: 126 EILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE M ++ D +Y ++ L K+D+ E+ +LD G +
Sbjct: 186 DLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 21/330 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + YS ++ + G + FRL E+ K GVV++ + Y ++
Sbjct: 282 MPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTK--GVVANIITYSIVIGACAKW 339
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA+ E + + V + +S + A G+++EA+ L M E P
Sbjct: 340 GQWEEAVALLREM--QENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTP--- 394
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N S+ ++ +GR+++AI++ ++M + PD ++++ ID + +A
Sbjct: 395 --NAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALW 452
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM G+ P+ +Y +DAC + R R+M GL P++ Y+ ++
Sbjct: 453 LLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCA 512
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVG-----GILDDGG 294
+EA F M ++ + D S + A + GG +E L+++G G++ D
Sbjct: 513 MGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPD-A 571
Query: 295 IEFSEELQEFVKGELSKEGREEEVVKLMEK 324
I + + KG+ R +E++ L+ +
Sbjct: 572 ISYRTAIDACAKGD-----RWKEIIDLLRE 596
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 127/285 (44%), Gaps = 16/285 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G + + Y ++ + G L +E++ GV D + Y + +
Sbjct: 387 MPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAH--GVPPDVINYSAAIDACAQA 444
Query: 61 GMEEEAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
E+A+ E A G +V ++ NS +DA G+ A++L M P
Sbjct: 445 SRWEQALWLLREMPATGLTPNV----ISYNSAIDACAKTGRSKIAVELLREM-----PAH 495
Query: 119 RLAVNLGSFNVMADGYCGQGR-FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
LA ++ +++ + C GR +++A+++FR+M +PD +S N I+ + G E
Sbjct: 496 GLAPDVITYSAVI-ASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEE 554
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A ++ GEM G+ PD +Y +DAC + +R + R+M GL P+ Y +
Sbjct: 555 ALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMS 614
Query: 238 KLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
G+ EA D++ L D +Y + A + GG+ E
Sbjct: 615 ACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKE 659
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 130/289 (44%), Gaps = 14/289 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D + YS + + L +K + GV + +VY + +
Sbjct: 212 MAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQ--GVKPNVIVYSAAISACRKG 269
Query: 61 GMEEEAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G E A++ E AVG V + ++V+DA G+++ A +L M P K
Sbjct: 270 GQWETAVDLLKEMPAVGLAPDV----ITYSTVIDACAKRGQWEPAFRLLMEM-----PTK 320
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ N+ +++++ G++++A+ + R+M E +PD +++++ I K G EA
Sbjct: 321 GVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEA 380
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
L EM +GV P+ +YG+++ AC + R + ++M G+ P++ Y+ +
Sbjct: 381 VGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDA 440
Query: 239 LVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
Q ++A ++ L + SY + A + G+ +E++
Sbjct: 441 CAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELL 489
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 10/283 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + +VYS + + G + L +E+ G+ D + Y +++ +G
Sbjct: 250 QGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAV--GLAPDVITYSTVIDACAKRGQW 307
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A E V + + + V+ A G+++EA+ L M+ +A +
Sbjct: 308 EPAFRLLMEM--PTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENG-----VAPD 360
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +++ +G++++A+ + R+M +P+ +S+ +I K G EA +L
Sbjct: 361 VITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQ 420
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM GV PD Y +DAC + +R + R+M +GL PN+ YN + + G
Sbjct: 421 EMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTG 480
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
A ++ L D +Y ++ + + G + +E L++
Sbjct: 481 RSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDL 523
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 114/288 (39%), Gaps = 12/288 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + YS + + + L E+ G+ + + Y S +
Sbjct: 422 MQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPAT--GLTPNVISYNSAIDACAKT 479
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK-FDEALKLFDRMKNEHNPPKR 119
G + A+E E + V S + A C G+ ++EAL LF M+ + P
Sbjct: 480 GRSKIAVELLREMPAHGLAPD---VITYSAVIASCAMGRQWEEALDLFREMQRQGITPDV 536
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ N + N A G G +++A++V +M PD +S+ ID K E
Sbjct: 537 VSCNT-AINACAQG----GWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEII 591
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L EMS G+ PD +Y M AC + R M+ GL P++ YN +
Sbjct: 592 DLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINAC 651
Query: 240 VQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIV 286
+ G EA M L D S+ + A +G + +E++
Sbjct: 652 AKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVL 699
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + YS ++ + LF E++ + G+ D V + +
Sbjct: 492 MPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQ--GITPDVVSCNTAINACAQG 549
Query: 61 GMEEEAMECYNEAVGENSSVKM--SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G EEA++ +GE ++ + A++ + +DA ++ E + L M P
Sbjct: 550 GWWEEALD----VLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPD 605
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ DG +K+A+ + R M SPD +++N+ I+ K G EA
Sbjct: 606 AISYRFAMSACSVDGL-----WKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEA 660
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
L +M G+ PD ++ +DAC ++ +M G+ PN A Y
Sbjct: 661 TVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATY 714
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 4/191 (2%)
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE-AEELYGEMSDKGVNPDEYT 196
G ++ A++V +M E PD+ ++++ I C N E A EL M+ +G PD T
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAI-AACGNARQWERAVELLASMAARGTPPDVLT 223
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
Y + AC +V+R + R M G++PN+ VY+ + + G + A M
Sbjct: 224 YSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMP 283
Query: 257 K-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
L D +Y ++ A + G+ + ++ + G+ + V G +K G+
Sbjct: 284 AVGLAPDVITYSTVIDACAKRGQWEPAFRLLME-MPTKGVVANIITYSIVIGACAKWGQW 342
Query: 316 EEVVKLMEKKE 326
EE V L+ + +
Sbjct: 343 EEAVALLREMQ 353
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++G+ +F+ + + G+ V + +LM GY G
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITK--WGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A +LFD M + P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y + M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK++ +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKG 395
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 109/231 (47%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E + M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ + TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 100/252 (39%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKDSASAVFAAILETRGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE R E++ + +++ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +LM + + + + F + GLRP++ +N L+ +++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L+E + M ++ D +Y ++ L K+D+ E+ +LD+G +
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + G+ V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K ++A +LF+ M + P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 109/231 (47%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ + LFEE+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVXLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 8/256 (3%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
+F J E G +SD V+ L+ Y G +A+ECY + + ++ VL
Sbjct: 51 VFAXJLETKGTQISDIYVFSGLIIAYLESGFLRDAIECYR--LTKEHKFRVPFDTCRKVL 108
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ L F ++ P +L FN++ + +G + A VF +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLECGYP-----ASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
++ P +SFN L++ K G L E L M GV PD YTY +L++ + ++++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKME 223
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
D F +M+D+GL PN + L+ + G + A + M+ + L D +Y ++
Sbjct: 224 DANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 271 KALSDGGKLDEILEIV 286
L G L + +++
Sbjct: 284 YGLCKKGDLKQAQDLI 299
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 101/252 (40%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAXJLETKGTQISD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 66 IYVFSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +LM + + + + F + GLRP++ +N L+ +++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE + M ++ D +Y ++ L K+++ E+ +LD+G +
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 128/248 (51%), Gaps = 9/248 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ L+ + G D F++ E+ K ++ + V Y +++ GY
Sbjct: 203 MLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRK--HIMPNVVTYSTVIDGYAKA 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ +NE + +S+ + V+ N++L G+F+EAL + M E + K+
Sbjct: 261 GRLDEALNLFNEM--KFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEM--ESSGIKKD 316
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
AV ++N + GY QG++++ VF +M R P+ L+++ LID K G+ EA E
Sbjct: 317 AV---TYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAME 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ E G+ D Y L+DA + V+ ++ +M G+RPN+ YN ++
Sbjct: 374 VFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFG 433
Query: 241 QVGMLDEA 248
+ G++++A
Sbjct: 434 RSGIVEDA 441
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 122/254 (48%), Gaps = 10/254 (3%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
LF E+ + G+ D Y +L+ G + A + +E + + V ++V+
Sbjct: 199 LFSEMLYR--GIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEM--PRKHIMPNVVTYSTVI 254
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
D G+ DEAL LF+ MK + ++ S+N + Y GRF++A+ V ++M
Sbjct: 255 DGYAKAGRLDEALNLFNEMKF-----ASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEME 309
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
D +++N L+ K G E + ++ EM + + P+ TY L+D +
Sbjct: 310 SSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQ 369
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ FR+ +GL+ ++ +Y+ L+ L + G+++ A SF D M K+ ++ + +Y ++
Sbjct: 370 EAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSII 429
Query: 271 KALSDGGKLDEILE 284
A G +++ E
Sbjct: 430 DAFGRSGIVEDATE 443
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM-------LAEAEELYGEMSD 187
CG + + G+ P+ +++N +ID K G+ + + L+ EM
Sbjct: 146 CGSDDYTFLLRELGNRGDSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLY 205
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G+ D +TY L+DA + ++D +M + PN+ Y+ ++ + G LDE
Sbjct: 206 RGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDE 265
Query: 248 AKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A + F+ M + +D SY ++ + G+ +E L + ++ GI+ +
Sbjct: 266 ALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKE-MESSGIKKDAVTYNALL 324
Query: 307 GELSKEGREEEVVKLMEKKEREK 329
G K+G+ EEV ++ E+ + E+
Sbjct: 325 GGYGKQGKYEEVKRVFEEMKAER 347
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 120 LAVNLGSFNVMADGYCGQG--RFKDAIEVFRKMGE-----YR-CSPDTLSFNNLIDQLCK 171
L NL ++N + D CG+G F A E+F +M YR D ++N L+D +CK
Sbjct: 166 LKPNLVTYNAVIDA-CGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCK 224
Query: 172 NGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
G + A ++ EM K + P+ TY ++D + R+D+ F +M + + +
Sbjct: 225 GGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVS 284
Query: 232 YNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEI 282
YN L+ ++G +EA + M +K D +Y ++ GK +E+
Sbjct: 285 YNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEV 336
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 154/344 (44%), Gaps = 30/344 (8%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G+ V + L+ G G ++L + G + V YG+L+ G G
Sbjct: 122 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ--GFQLNQVGYGTLINGVCKIGDT 179
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A++ + G + K V ++++DALC EA LF M K ++ +
Sbjct: 180 RAAIKLLKKIDGRLT--KPDVVMYSTIIDALCKYQLVSEAYGLFSEMT-----VKGISAD 232
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE---- 179
+ ++N + G+C G+ K+AI + M +PD ++ L+D LCK G + EA+
Sbjct: 233 VVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRIS 292
Query: 180 ---ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+L EM D+G D TY L+D + +D F KM D G+RPN+ + L+
Sbjct: 293 YVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILL 352
Query: 237 GKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
L + G L +A+ F D++ K ++ +Y M+ G L+E L ++ + D+G I
Sbjct: 353 DGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCI 412
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+ E ++ L +K E +KAE R+ A
Sbjct: 413 PNAFTF-------------ETIIIALFKKDENDKAEKLLRQMIA 443
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 129/265 (48%), Gaps = 22/265 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ +GF + V Y L+ G + GD+ +L +++ +L D V+Y +++
Sbjct: 154 LLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTK--PDVVMYSTIIDALCKY 211
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ EA ++E + S V N+++ C GK EA+ L + M + P
Sbjct: 212 QLVSEAYGLFSEMTVKGISA--DVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINP--- 266
Query: 121 AVNLGSFNVMADGYCGQGRFKDA----------IEVFRKMGEYRCSPDTLSFNNLIDQLC 170
++ ++ ++ D C +G+ K+A I+ R G+ D +++++LID LC
Sbjct: 267 --DVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQ---PADVITYSSLIDGLC 321
Query: 171 KNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
KNG L A L+ +M D+G+ P+ +T+ +L+D ++ R+ D F+ ++ G N+
Sbjct: 322 KNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVY 381
Query: 231 VYNRLVGKLVQVGMLDEAKSFFDIM 255
YN ++ + G+L+EA + M
Sbjct: 382 TYNVMINGHCKQGLLEEALTMLSKM 406
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 124/258 (48%), Gaps = 16/258 (6%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V+YS ++ + + LF E+ K G+ +D V Y +L+ G+ + G +EA+
Sbjct: 196 PDVVMYSTIIDALCKYQLVSEAYGLFSEMTVK--GISADVVTYNTLIYGFCIVGKLKEAI 253
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK-------LFDRMKNEHNPPKRL 120
N V + ++ ++DALC GK EA + L D M++ P
Sbjct: 254 GLLNVMVLK--TINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQP---- 307
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + DG C G AI +F KM + P+ +F L+D L K G L +A+E
Sbjct: 308 -ADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQE 366
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ ++ KG + + YTY ++++ + +++ T KM D+G PN + ++ L
Sbjct: 367 VFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALF 426
Query: 241 QVGMLDEAKSFFDIMVKK 258
+ D+A+ M+ +
Sbjct: 427 KKDENDKAEKLLRQMIAR 444
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 112/238 (47%), Gaps = 28/238 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG--------GVVSDGVVYGS 52
M VKG AD V Y+ L+ GF G +LKE +G + D Y
Sbjct: 224 MTVKGISADVVTYNTLIYGFCIVG----------KLKEAIGLLNVMVLKTINPDVYTYTI 273
Query: 53 LMKGYFMKGMEEEA---MECYNEAVGENSSVKMSA--VANNSVLDALCNNGKFDEALKLF 107
L+ +G +EA + + + E A + +S++D LC NG D A+ LF
Sbjct: 274 LVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALF 333
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
++MK++ P N+ +F ++ DG GR KDA EVF+ + + ++N +I+
Sbjct: 334 NKMKDQGIRP-----NMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIN 388
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
CK G+L EA + +M D G P+ +T+ ++ A F+ + D R+M+ GL
Sbjct: 389 GHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 446
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +++ C+ G+ + ++ PP + + N + G C +G+ K A+
Sbjct: 97 NILINCFCHMGQITFGFSVLAKILKRGYPPSTV-----TLNTLIKGLCLKGQVKKALHFH 151
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
K+ + + + LI+ +CK G A +L ++ + PD Y ++DA +
Sbjct: 152 DKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKY 211
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASY 266
V + F +M G+ ++ YN L+ VG L EA ++MV K + D +Y
Sbjct: 212 QLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTY 271
Query: 267 KFMMKALSDGGKLDE 281
++ AL GK+ E
Sbjct: 272 TILVDALCKEGKVKE 286
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 99 KFDEALKLFDRMKNEHNPP-------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+F++ L F +MK+ K + +L + N++ + +C G+ V K+
Sbjct: 61 QFNKILDSFAKMKHYSTVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKIL 120
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ P T++ N LI LC G + +A + ++ +G ++ YG L++ ++
Sbjct: 121 KRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTR 180
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMM 270
+K+ +P++ +Y+ ++ L + ++ EA F ++ VK + D +Y ++
Sbjct: 181 AAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLI 240
Query: 271 KALSDGGKLDE 281
GKL E
Sbjct: 241 YGFCIVGKLKE 251
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA+ F +M R +P + FN ++D K + L + KG+ PD +T +L+
Sbjct: 42 DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTV-SLSHRLELKGIQPDLFTLNILI 100
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
+ + ++ G + K++ G P+ N L+ L G + +A F D
Sbjct: 101 NCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHD-------- 152
Query: 262 DDASYKFMMKALSDGGKLDEI--LEIVGGILDDGGIEFSEELQEFVKGELSK 311
K L+ G +L+++ ++ G+ G + +L + + G L+K
Sbjct: 153 ---------KLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTK 195
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 126/247 (51%), Gaps = 13/247 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ GF + G + F+E+ E G+ + V Y +L+ G+ G +
Sbjct: 515 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE--CGLNPNPVSYTTLIDGHSKDGKVD 572
Query: 65 EAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
A+ E +G N +V+ + N+V++ L +F EA K+ D+M + P
Sbjct: 573 IALSLLERMEEMGCNPNVE----SYNAVINGLSKENRFSEAEKICDKMAEQGLLP----- 623
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ ++ + DG C GR + A ++F M + +C P+ ++++LI LC+ G EAE L
Sbjct: 624 NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILL 683
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM KG+ PDE T+ L+D + R+D R+MVD G +PN Y+ L+ L +
Sbjct: 684 KEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKE 743
Query: 243 GMLDEAK 249
+L E K
Sbjct: 744 CLLLEEK 750
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 159/349 (45%), Gaps = 41/349 (11%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + + + Y+ L+ G R+G + F++F +++++ + + Y SL+ G +G
Sbjct: 619 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR--KCLPNLYTYSSLIYGLCQEGKA 676
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA E E + V S++D G+ D A L RM + P N
Sbjct: 677 DEAEILLKEM--ERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKP-----N 729
Query: 124 LGSFNVMADGY---CGQGRFKDAIE---------------------VFRKMGEYRCSPDT 159
+++V+ G C K A++ + +M E C P
Sbjct: 730 YRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTL 789
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD-EYTYGLLMDACFEVNRVDDGATYFR 218
+++ L+ LC+ G EAE+L +M ++G PD E Y LL+ C + VD F
Sbjct: 790 DTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNL-EVDHALKIFH 848
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGG 277
+ G + +L++Y L+ L + G ++EA++ FD M+ K+ D+ + ++ L G
Sbjct: 849 SIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEG 908
Query: 278 KLDEILEIVGGILDDGGIEFSEELQEFVK--GELSKEGREEEVVKLMEK 324
+LD ++++ I++ F+ +Q +V ELS+ G+ E L +K
Sbjct: 909 ELDLCMKLL-HIMESKN--FTPNIQTYVILGRELSRIGKSIESEPLADK 954
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 127/264 (48%), Gaps = 9/264 (3%)
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
M E A Y + + NS ++ S + N++++ L GK EA + ++ P
Sbjct: 220 MVEGARNLYKQML--NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSP---- 273
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ ++ + G+C A VF +M + C P++++++ LI+ LC G + EA ++
Sbjct: 274 -DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDM 332
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
EM +KG+ P YTY L + A + ++ +M G RPN+ Y L+ L +
Sbjct: 333 LEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR 392
Query: 242 VGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+G L+ A + M+K+ L + +Y ++ L GG+ L+I + G + ++
Sbjct: 393 LGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQT 452
Query: 301 LQEFVKGELSKEGREEEVVKLMEK 324
E +KG L G E+ + L EK
Sbjct: 453 YNEIIKG-LCLGGDIEKAMVLFEK 475
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 154/358 (43%), Gaps = 42/358 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+F D Y+ L+LG R+ + D F +F+ + ++ G + V Y +L+ G +
Sbjct: 266 IFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE--GCDPNSVTYSTLINGLCNE 323
Query: 61 GMEEEAMECYNEAVGE-------NSSVKMSAVAN-------------------------- 87
G +EA++ E + + ++ ++A+
Sbjct: 324 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTY 383
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ L GK + A+ L+ +M E L N ++N + + C GRF A+++F
Sbjct: 384 TALISGLSRLGKLEVAIGLYHKMLKE-----GLVPNTVTYNALINELCVGGRFSTALKIF 438
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M + +T ++N +I LC G + +A L+ +M G P TY L++
Sbjct: 439 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 498
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
V++ A M ++G P+ YN LV + G L+ A +F MV+ L + SY
Sbjct: 499 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 558
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ S GK+D L ++ + + G E + G LSKE R E K+ +K
Sbjct: 559 TTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVING-LSKENRFSEAEKICDK 615
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 131/292 (44%), Gaps = 12/292 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G +A+ Y+ ++ G GD + LFE++ + G + V Y +L+ GY KG
Sbjct: 444 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM--GPLPTVVTYNTLINGYLTKGNV 501
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAV 122
A + + + + + N ++ GK + A F M + NP
Sbjct: 502 NNAARLLD--LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP------ 553
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N S+ + DG+ G+ A+ + +M E C+P+ S+N +I+ L K +EAE++
Sbjct: 554 NPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 613
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M+++G+ P+ TY L+D R F M PNL Y+ L+ L Q
Sbjct: 614 DKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 673
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
G DEA+ M +K L D+ ++ ++ G++D ++ ++D G
Sbjct: 674 GKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVG 725
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 8/144 (5%)
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+S G Y+ L+ + V+ +++M++SG++P+L +N L+ L + G
Sbjct: 195 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 254
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD----DGGIEFSE 299
+ EA+ I+ + + D + F +L G + L++ G+ D +G S
Sbjct: 255 KVREAEL---ILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 311
Query: 300 ELQEFVKGELSKEGREEEVVKLME 323
+ G L EGR +E + ++E
Sbjct: 312 TYSTLING-LCNEGRVDEALDMLE 334
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 148/340 (43%), Gaps = 51/340 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGFV D YS ++ + F LF+E+K GV+ D Y L+ +
Sbjct: 446 MMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSV--GVIPDVYTYTILIDSFCKV 503
Query: 61 GMEEEAMECYNE--AVGENSSVKM-------------------------------SAVAN 87
G+ E+A ++E +VG + SV + +
Sbjct: 504 GLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITY 563
Query: 88 NSVLDALCNNGKFDEALKLFDRM-------------KNEHNPPKRLAVNLGSFNVMADGY 134
++++D LC G+ +A +++ +M + EH +A N+ ++ + DG
Sbjct: 564 SALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHT--DSIAPNVVTYGALIDGL 621
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C + DA E+ M C P+ + ++ LID CK G L A+E++ MS G P
Sbjct: 622 CKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTV 681
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
+TY L+DA F+ R+D +M++S PN+ Y ++ L ++G +A +
Sbjct: 682 HTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSM 741
Query: 255 MVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
M K+ + +Y ++ L GK+D L++ ++ G
Sbjct: 742 MEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQG 781
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 119/294 (40%), Gaps = 56/294 (19%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ +++ +F + + G + + Y +L+ G G ++A E Y
Sbjct: 526 VTYTALLHAYLKTKQVPQASDIFHRMVD--AGCAPNTITYSALVDGLCKAGESQKACEVY 583
Query: 71 NEAVG--------------ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+ +G S+ + V +++D LC K +A +L D M +
Sbjct: 584 AKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCE 643
Query: 117 PKRLAVNLGSFNVMADGYCGQGR------------------------------FKD---- 142
P + ++ + DG+C G+ FKD
Sbjct: 644 PNHII-----YDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLD 698
Query: 143 -AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
AI+V +M E C+P+ +++ +ID LC+ G +A +L M +G NP+ TY L+
Sbjct: 699 LAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLI 758
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
D + +VD F +M+ G PN Y L+ G+LDEA S M
Sbjct: 759 DGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM 812
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 134/336 (39%), Gaps = 52/336 (15%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK---GM 62
F D V+ + ++ G + D ++ + + V Y +L+ G+ K G
Sbjct: 270 FKLDTVLCTQMISGLMEASLFDEAISFLHRMR--CNSCIPNVVTYRTLLAGFLKKKQLGW 327
Query: 63 EEEAMECY-NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
+ + NE N S+ NS++ + CN + A KL +RM PP +
Sbjct: 328 CKRIISMMMNEGCNPNPSL------FNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVV 381
Query: 122 VN----------------------------LGSFNVM--------ADGYCGQGRFKDAIE 145
N L S V+ A CG G+F A +
Sbjct: 382 YNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQ 441
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+ + M PDT +++ +I LC+ + +A L+ EM GV PD YTY +L+D+
Sbjct: 442 IIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFC 501
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDA 264
+V ++ ++F +M G P++ Y L+ ++ + +A F MV +
Sbjct: 502 KVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTI 561
Query: 265 SYKFMMKALSDGGKLDEILEIVG---GILDDGGIEF 297
+Y ++ L G+ + E+ G D+ G +F
Sbjct: 562 TYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDF 597
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 134/321 (41%), Gaps = 48/321 (14%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
++Y L+ GF + G D +F + + G + Y SL+ F + A++
Sbjct: 647 IIYDALIDGFCKVGKLDNAQEVFFRMSK--CGYLPTVHTYTSLIDAMFKDRRLDLAIKVL 704
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGSFNV 129
++ + SS + V +++D LC G+ +ALKL M K NP N+ ++
Sbjct: 705 SQML--ESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNP------NVVTYTS 756
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD-- 187
+ DG G+ ++++F +M C+P+ +++ LI+ C G+L EA L EM
Sbjct: 757 LIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTY 816
Query: 188 -------------------------------KGVNPDEYTYGLLMDACFEVNRVDDGATY 216
G+ YGLL+D+ + R++
Sbjct: 817 WPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALEL 876
Query: 217 FRKMVDSGLRPNLA---VYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS-YKFMMKA 272
++M++ N+ Y L+ L L++A + + +K + + S + ++K
Sbjct: 877 HKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKG 936
Query: 273 LSDGGKLDEILEIVGGILDDG 293
L K +E L++ + D+G
Sbjct: 937 LIKVNKWNEALQLCYSMCDEG 957
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 35/246 (14%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ G R G+ +L ++++ G + V Y SL+ G G + +++ +
Sbjct: 717 VTYTAMIDGLCRIGECQKALKLLSMMEKR--GCNPNVVTYTSLIDGLGKSGKVDMSLQLF 774
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP-------------P 117
+ + + + V +++ C G DEA L MK + P
Sbjct: 775 TQMITQGCAPNY--VTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFS 832
Query: 118 KRLAVNLG---------------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS- 161
K+ +LG + ++ D + GR + A+E+ ++M E S + S
Sbjct: 833 KKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSK 892
Query: 162 --FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
+ +LI LC L +A ELY E++ KGV P+ + L+ +VN+ ++
Sbjct: 893 DTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYS 952
Query: 220 MVDSGL 225
M D G+
Sbjct: 953 MCDEGV 958
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 138/392 (35%), Gaps = 80/392 (20%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ Y+ L+ G D FR+ +E+ E G +D G + +G
Sbjct: 202 GYRPSGATYNALVQVLATAGQMDMGFRVQKEMSEL--GFCTDKFTVGCFAQALCKEGRWS 259
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------- 117
+A+ + E K+ V ++ L FDEA+ RM+ P
Sbjct: 260 DAL-----VMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRT 314
Query: 118 --------------KRLA---------VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
KR+ N FN + YC + A ++ +M
Sbjct: 315 LLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCG 374
Query: 155 CSPDTLSFNNLIDQLCKN------GMLAEAEELYGE------------------------ 184
C P + +N I +C +LA AE++Y E
Sbjct: 375 CPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMG 434
Query: 185 -----------MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
M KG PD TY ++ E +V+ F++M G+ P++ Y
Sbjct: 435 KFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYT 494
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
L+ +VG++++A+S+FD M +Y ++ A ++ + +I ++D
Sbjct: 495 ILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDA 554
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
G + V G L K G ++ ++ K
Sbjct: 555 GCAPNTITYSALVDG-LCKAGESQKACEVYAK 585
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 69/168 (41%), Gaps = 4/168 (2%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
NV+ C G + A+E ++ ++ P ++N L+ L G + + EMS
Sbjct: 175 LNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMS 234
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G D++T G A + R D + + + + +++ L++ + D
Sbjct: 235 ELGFCTDKFTVGCFAQALCKEGRWSDALVMIER---EDFKLDTVLCTQMISGLMEASLFD 291
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
EA SF M + +Y+ ++ +L I+ ++++G
Sbjct: 292 EAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEG 339
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 130/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++GD +F + + G+ V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHRFCKEGDIRVAQLVFNAITK--WGLRPSVVSFNTLMNGYIRLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++ S V+ + +++ LC K D+A LFD M + K L N
Sbjct: 189 EGFRL--KSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLD-----KGLVPNG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G+C R A+E++++M SPD +++N LI LCK G L +A +L E
Sbjct: 242 VTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG- 243
MS KG+ PD+ TY L+D C + ++ + ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 361
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
LD K +++ LK D +Y ++ G
Sbjct: 362 YLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKG 395
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 9/230 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ +K G+V +GV + +L+ G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDK--GLVPNGVTFTTLIAGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 RRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
+ EM G+ PD TY ++++ + V G+ ++M G P++
Sbjct: 368 VLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 417
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 5/177 (2%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E+
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 128
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
D G Y + +LM + + F + GLRP++ +N L+ +++G LD
Sbjct: 129 DCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLD 188
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFS 298
E M ++ D +Y ++ L K+D+ + +LD G G+ F+
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFT 245
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 107/199 (53%), Gaps = 6/199 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ LC GK EAL LFD+M +E P N+ ++ + +G C G AI +
Sbjct: 119 TTLIRGLCVEGKIGEALHLFDKMIDEGFQP-----NVVTYGTLINGLCKVGNTSAAIRLL 173
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
R M + C PD + + ++ID LCK+ + EA L+ +M +G++PD +TY L+ A +
Sbjct: 174 RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 233
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
T +MV+S + P++ +++ +V L + G + EA D+M+++ ++ D +Y
Sbjct: 234 CEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTY 293
Query: 267 KFMMKALSDGGKLDEILEI 285
+M ++DE +++
Sbjct: 294 TTLMDGHCLQSEMDEAVKV 312
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 9/232 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G DP ++ L+ G +G LF+++ ++ G + V YG+L+ G G
Sbjct: 110 GHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE--GFQPNVVTYGTLINGLCKVGNTS 167
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ E + + V S++D+LC + + EA LF +M + P ++
Sbjct: 168 AAIRLLRSM--EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP-----DI 220
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + C +K + +M + PD + F+ ++D LCK G + EA E+
Sbjct: 221 FTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDM 280
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
M +GV PD TY LMD + +D+ F MV G P++ Y L+
Sbjct: 281 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 332
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 127/292 (43%), Gaps = 43/292 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF + V Y L+ G + G++ RL +++ G D V+Y S++
Sbjct: 141 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ--GNCQPDVVIYTSIIDSLCKD 198
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA +++ VG+ S + S++ ALCN ++ L ++M N ++
Sbjct: 199 RQVTEAFNLFSQMVGQGISPDI--FTYTSLVHALCNLCEWKHVTTLLNQMVNS-----KI 251
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ F+ + D C +G+ +A E+ M + PD +++ L+D C + EA +
Sbjct: 252 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 311
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA----------------------------CFEVNRVDD 212
++ M KG PD +Y L++A EV R D
Sbjct: 312 VFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDK 371
Query: 213 ------GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
G T +MV+S + PN+ +++ +V L + G + EA D+M+K+
Sbjct: 372 MKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR 423
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 45/268 (16%)
Query: 100 FDEALKLFDRMKNEHNPPK---------------------RLAVNLGSF---------NV 129
D+AL F+R+ + H PP L+ + SF N+
Sbjct: 26 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ + +C R A V K+ + PD +F LI LC G + EA L+ +M D+G
Sbjct: 86 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
P+ TYG L++ +V R M +P++ +Y ++ L + + EA
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 205
Query: 250 SFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIV-----GGILDDGGIEFSEELQE 303
+ F MV + + D +Y ++ AL + + + ++ IL D I FS
Sbjct: 206 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI-FST---- 260
Query: 304 FVKGELSKEGR---EEEVVKLMEKKERE 328
V L KEG+ E+V +M ++ E
Sbjct: 261 -VVDALCKEGKVTEAHEIVDMMIQRGVE 287
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDR-MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N ++++ C+ + A + + +K H P + +F + G C +G+ +A+ +
Sbjct: 84 NILINSFCHLNRVGFAFSVLAKILKLGHQP------DPTTFTTLIRGLCVEGKIGEALHL 137
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F KM + P+ +++ LI+ LCK G + A L M PD Y ++D+ +
Sbjct: 138 FDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCK 197
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDAS 265
+V + F +MV G+ P++ Y LV L + + + MV K+ D
Sbjct: 198 DRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI 257
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDG 293
+ ++ AL GK+ E EIV ++ G
Sbjct: 258 FSTVVDALCKEGKVTEAHEIVDMMIQRG 285
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 47/226 (20%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D Y+ L+ + V L ++ ++ D V++ +++ +G
Sbjct: 214 QGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVN--SKILPDVVIFSTVVDALCKEGKV 271
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E + + V+ V +++D C + DEA+K+FD M K A +
Sbjct: 272 TEAHEIVDMMI--QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR-----KGFAPD 324
Query: 124 LGSFNVMADGYCGQ-------------GRFKD--------AIEVFRK------------- 149
+ S+ + + G+ G K+ A+EV RK
Sbjct: 325 VISYTTLINA--GKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLL 382
Query: 150 --MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD 193
M + P+ + F+ ++D LCK G + EA ++ M +GV P+
Sbjct: 383 NEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPN 428
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 43/250 (17%)
Query: 41 GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF 100
G + + V Y S++ GY G E+AM YN+ +G ++ +AV N +++ G
Sbjct: 293 GVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTP--NAVTYNVLINGYGKAGNM 350
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
A+ ++ +M PP ++ +F+ + DGYC G+ DA+ + +M +Y+ P+
Sbjct: 351 GSAVAVYQQMILRRCPP-----DVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAH 405
Query: 161 SF------------------------------------NNLIDQLCKNGMLAEAEELYGE 184
+F N +ID LCK G + EA + E
Sbjct: 406 TFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILME 465
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG PD+YTY +L+ R+ + T+F KMVD+G P+ N +G L++ GM
Sbjct: 466 MEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGM 525
Query: 245 LDEAKSFFDI 254
E I
Sbjct: 526 PSEVDRIMKI 535
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 147/357 (41%), Gaps = 47/357 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVV-YGSLMKGYFMKGME 63
G + Y+ LM F+ G LFE + GG S V + +KG G
Sbjct: 187 GCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQ--GGAYSPDVWSFNVAIKGVCQVGDV 244
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+E S V NN ++ LC + ++ R++ + N
Sbjct: 245 QKALELVERMAEFGCSPD--TVTNNILVGGLCRVKEVSRGREVLRRLQRD----GVCMPN 298
Query: 124 LGSFNVMADGYCGQGRFKD-----------------------------------AIEVFR 148
+ ++ + GYC GR +D A+ V++
Sbjct: 299 VVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQ 358
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+M RC PD ++F+ LID C+ G L +A + EMS + P+ +T+ +++ + + N
Sbjct: 359 QMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQN 418
Query: 209 RVDDGATYFRKM-VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASY 266
R + + +++ + + + P + N ++ L + G +DEA ++ K + D +Y
Sbjct: 419 RSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTY 478
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
++ G++ E + ++D G S + F+ G L K G EV ++M+
Sbjct: 479 TILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFI-GCLLKAGMPSEVDRIMK 534
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE--HNPPKRL-------AVNLG---- 125
++ SA + V+ LC + + +ALKLFD+M ++ H P R N G
Sbjct: 116 AIPPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLDA 175
Query: 126 ------------------SFNVMADGYCGQGRFKDAIEVFRKM---GEYRCSPDTLSFNN 164
++N + + + G GR +DA+ +F G Y SPD SFN
Sbjct: 176 AAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAY--SPDVWSFNV 233
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
I +C+ G + +A EL M++ G +PD T +L+ V V G R++ G
Sbjct: 234 AIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDG 293
Query: 225 L-RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
+ PN+ Y ++ + G +++A + ++ M+
Sbjct: 294 VCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMI 326
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 33/315 (10%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V G + V Y+ L+ F R G+ + L E+++ + GV + V +++ G G
Sbjct: 239 VHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENE--GVPQNIVTLNTIVGGLCRAGR 296
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNP----- 116
A+E + E K +AV ++++ AL + A++LF ++M H+P
Sbjct: 297 TGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMY 356
Query: 117 ---------PKRL--AVNLGS-------------FNVMADGYCGQGRFKDAIEVFRKMGE 152
RL A ++ S +N++ G+C + R +A E+ ++M E
Sbjct: 357 FTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKE 416
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
PD ++N L+ CK G A +EL G+M D G P T+G L+ +V ++D+
Sbjct: 417 VGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDE 476
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
R M +SG+ PN +YN L+ L + G +D A FD M +K + + ++ ++K
Sbjct: 477 ALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLK 536
Query: 272 ALSDGGKLDEILEIV 286
L D ++ E++
Sbjct: 537 GLRDKNMPEKAFELM 551
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 13/284 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D ++ ++ R D G+ R++ L + V D V YG L+ G G +A+
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYA-LMQGCASVRPDVVTYGILVNGLCKAGRVGDALR 193
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD-RMKNEHNPPKRLAVNLGSF 127
+ ++ ++ V N+V+D LC +G+ EAL + RM + H P N ++
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPP----NTVTY 249
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + D +C G A E+ KM + ++ N ++ LC+ G A E + E
Sbjct: 250 NCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--K 307
Query: 188 KGVNP----DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ V P + TY L+ A N V F + + G P+ +Y ++ L Q G
Sbjct: 308 RTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAG 367
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
L++A S M + K+D +Y ++ +L E E++
Sbjct: 368 RLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELL 411
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 136/320 (42%), Gaps = 13/320 (4%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V Y L+ G + G R+ + + + + D V +++ G G +EA+
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + + V N ++DA C G A +L ++M+NE P N+ +
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVP-----QNIVTL 284
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSP----DTLSFNNLIDQLCKNGMLAEAEELYG 183
N + G C GR A+E FR+ + P + ++++ L+ L + A EL+
Sbjct: 285 NTIVGGLCRAGRTGAALEFFRE--KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFH 342
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E +G +PD Y ++ + R++D + M ++G + + YN L+ +
Sbjct: 343 EKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKK 402
Query: 244 MLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L EA M + ++ D +Y ++ G + E++G ++DDG
Sbjct: 403 RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFG 462
Query: 303 EFVKGELSKEGREEEVVKLM 322
V G K G+ +E ++++
Sbjct: 463 TLVHG-YCKVGKIDEALRIL 481
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 9/245 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V YS L+ + + LF E + G D ++Y +++ G G E+A C
Sbjct: 319 VTYSTLVGALLHTNNVGMAMELFHEKMSE--GHSPDAIMYFTMISGLTQAGRLEDA--CS 374
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + K+ A N ++ C + EA +L MK P ++ ++N +
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRP-----DVCTYNTL 429
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C G F E+ KM + C P ++F L+ CK G + EA + M + G+
Sbjct: 430 LSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGI 489
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+P+ Y L+D + VD F +M + + N+ +N L+ L M ++A
Sbjct: 490 HPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFE 549
Query: 251 FFDIM 255
D M
Sbjct: 550 LMDQM 554
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDG-----VVYGSLMKGYFM 59
G D Y+ L+ G + GD F + E LG ++ DG + +G+L+ GY
Sbjct: 418 GIRPDVCTYNTLLSGSCKAGD-------FAAVDELLGKMIDDGCQPSVITFGTLVHGYCK 470
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G +EA+ + S + + V N+++D LC G D A++LFD MK + P
Sbjct: 471 VGKIDEALRILRSM--DESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVP--- 525
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQL 169
N+ +FN + G + + A E+ +M E RC PD ++ + L++ L
Sbjct: 526 --ANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D Y+ L+ GF R + L +E+KE G+ D Y +L+ G G
Sbjct: 383 GFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEV--GIRPDVCTYNTLLSGSCKAG--- 437
Query: 65 EAMECYNEAVGE--NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+E +G+ + + S + +++ C GK DEAL++ M P +
Sbjct: 438 -DFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVI- 495
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+N + D C +G AIE+F +M E + +FN L+ L M +A EL
Sbjct: 496 ----YNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELM 551
Query: 183 GEMSDKGVNPDEYTYGLLMD 202
+M ++ PD T +LM+
Sbjct: 552 DQMREERCFPDYVTVDVLME 571
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 170/364 (46%), Gaps = 43/364 (11%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D ++Y+ ++ F +D + L+ E+ K + + V + SL+ G+ + G +EA+
Sbjct: 192 PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVK--KIYPNVVTFNSLIYGFCIVGQLKEAV 249
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP---------- 117
NE N V + N ++D LC G+ +A + M + P
Sbjct: 250 GLLNEMSLNN--VNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMD 307
Query: 118 --------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
+ + N+ S++VM +G C +A+++F++M +P
Sbjct: 308 GYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTP 367
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
+T+++++LID LCK+G +++ +L E++++G + TY L++ + ++VD
Sbjct: 368 NTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALL 427
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDG 276
KM D G++P+++ Y LV L + G L +A+ + D++ K ++ Y M+ L
Sbjct: 428 TKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKE 487
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKARE 336
G DE L ++ + D+G + + + + L K + + VKL+ E ARE
Sbjct: 488 GFFDEALSLLSQMEDNGCMPDAVTYETLISA-LFKNNKNGKAVKLLR-------EMIARE 539
Query: 337 AEAA 340
++ +
Sbjct: 540 SDCS 543
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 133/285 (46%), Gaps = 12/285 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D V +L++G + G +EA+ ++ + + + V+ ++++ LC +G+
Sbjct: 118 GYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK--RFHLDQVSYGTLINGLCKSGETR 175
Query: 102 EALKLFDRMKNEHNPPKRLAV--NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
AL+L +++ L V ++ + + D +C DA +++ +M + P+
Sbjct: 176 AALQLLRKIEG------LLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNV 229
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
++FN+LI C G L EA L EMS VNP+ YT+ +L+D + V +
Sbjct: 230 VTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSV 289
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGK 278
M+ G+ PN+ Y L+ V +++AK F+ I ++ + + SY M+ L
Sbjct: 290 MIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKM 349
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+DE +++ + + + G L K GR +V L++
Sbjct: 350 VDEAVKLFKEMHLKNMTPNTVTYSSLIDG-LCKSGRISDVWDLID 393
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+P FN ++ L K A +M KG+ P+ +T+ +L++ + +++ +
Sbjct: 50 TPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFS 109
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALS 274
K++ G +P+ N L+ L G + EA +F D ++ K+ +D SY ++ L
Sbjct: 110 MVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLC 169
Query: 275 DGGKLDEILEIVGGI 289
G+ L+++ I
Sbjct: 170 KSGETRAALQLLRKI 184
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 100/222 (45%), Gaps = 12/222 (5%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+ +N + N+ N +L +L F A+ +M+ + P+
Sbjct: 34 DDAVSSFNHILHMNNHTP-PIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPE----- 87
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN++ + + + A + K+ + PDT++ N L+ LC NG + EA +
Sbjct: 88 MFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHD 147
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL---RPNLAVYNRLVGKLV 240
+ K + D+ +YG L++ + RK+ GL RP++ +Y ++
Sbjct: 148 HVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFC 205
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ ++ +A + +++VKK+ + ++ ++ G+L E
Sbjct: 206 KDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKE 247
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 153/325 (47%), Gaps = 27/325 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLM-----K 55
M +G D VV+S L+ G + V LF E+ G+ + V + +++ +
Sbjct: 439 MINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNV--GIHPNIVFFNTILCNLCKE 496
Query: 56 GYFMKGME-EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH 114
G M+G +++EC V+ ++ N+++D C G DEA KL + M +
Sbjct: 497 GRVMEGQRLVDSIECM--------GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 548
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
P S+N + GYC GR A FRKM +P +++N ++ L +
Sbjct: 549 LKPDSF-----SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKR 603
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+EA+ELY M + G D YTY ++++ + N VD+ F+ + GL+ N+ +N
Sbjct: 604 FSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNI 663
Query: 235 LVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++G L++ G ++A F I L + +Y+ +++ L + G L+E + + +G
Sbjct: 664 MIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNG 723
Query: 294 GIEFSEELQEFV-----KGELSKEG 313
S+ L V +G++S+ G
Sbjct: 724 TAPNSQMLNALVRRLLHRGDISRAG 748
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 132/279 (47%), Gaps = 9/279 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE-KLGGVVSDGVVYGSLMKGYFMKGME 63
G + D V Y+ L+ G + ++ L + + ++ + V Y +++ G+F +G
Sbjct: 160 GCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQV 219
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++ + E + + + V +V+D LC FD A +F +M + P N
Sbjct: 220 DKPYNLFLEMM--DRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP-----N 272
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + GY G++K+ + + +M P+ ++ +L++ LCKNG EA +
Sbjct: 273 IDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFD 332
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M KG+ P TYG+++ + + MV +G+ PN ++N + G
Sbjct: 333 SMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCG 392
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
++D+A F+ M ++ L D SY ++ AL G++D+
Sbjct: 393 IIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDD 431
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 10/283 (3%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ L+ G++ G V R+ EE+ GG + YGSL+ G EA ++
Sbjct: 275 TYNCLIHGYLSIGKWKEVVRMLEEMSA--GGPKPNCCTYGSLLNYLCKNGRCREARFFFD 332
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+G+ +K S +L G E L + M P N FN+
Sbjct: 333 SMIGK--GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISP-----NHHIFNIFF 385
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
Y G A+++F KM + SPD +S+ LID LCK G + +AE + +M ++GV
Sbjct: 386 SAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVT 445
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
PD + L+ V++ + F +M++ G+ PN+ +N ++ L + G + E +
Sbjct: 446 PDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRL 505
Query: 252 FD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
D I ++ D SY ++ G +DE +++ G++ G
Sbjct: 506 VDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 548
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 27 DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVA 86
D + LF E+ K G+ D V Y +++ G F G EA E Y + NS +M+
Sbjct: 808 DDAYSLFREMLMK--GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI--NSRTQMNIYT 863
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N +L+ LC + DEA K+F + + K L +N+ +FN+M GR +DA+++
Sbjct: 864 YNIILNGLCKSNCVDEAFKMFQSLCS-----KGLQLNIITFNIMIGALLKGGRKEDAMDL 918
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F + PD +++ + + L + G L E + L+ M G D L+ +
Sbjct: 919 FAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQ 978
Query: 207 VNRVDDGATYFRKM 220
+ Y K+
Sbjct: 979 RGDISRAGAYLSKL 992
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
Query: 127 FNVMADGYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
N + +G C R +A++V ++M E C PDT+S+N L+ LC EA EL M
Sbjct: 132 INQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMM 191
Query: 186 SDKGV---NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+D V P+ +Y +++ F +VD F +M+D G+ P++ Y ++ L +
Sbjct: 192 ADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKA 251
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+ D A++ F M+ +K + +Y ++ GK E++ ++
Sbjct: 252 QLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRML 296
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
R DA +FR+M +PD +++N ++ L + G +EA+ELY M + + YTY
Sbjct: 806 RIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYN 865
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVK 257
++++ + N VD+ F+ + GL+ N+ +N ++G L++ G ++A F I
Sbjct: 866 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPAN 925
Query: 258 KLKMDDASYKFMMKALSDGGKLDE 281
L D +Y+ + + L + G L+E
Sbjct: 926 GLVPDVVTYRLVAENLIEEGSLEE 949
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 113/248 (45%), Gaps = 9/248 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D + Y+ L+ G G D +L E + G+ D Y +L+ GY G +
Sbjct: 513 GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSV--GLKPDSFSYNTLLHGYCKAGRID 570
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + + + ++ + V N++L L +F EA +L+ M N ++
Sbjct: 571 SAYSHFRKML--SNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT-----KWDI 623
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ +G C +AI++F+ + + ++FN +I L K G +A +L+
Sbjct: 624 YTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAA 683
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ G+ + TY L+++ E +++ + F M +G PN + N LV +L+ G
Sbjct: 684 IPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGD 743
Query: 245 LDEAKSFF 252
+ A ++
Sbjct: 744 ISRAGAYL 751
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 5/169 (2%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V N++L L G+F EA +L+ M N R +N+ ++N++ +G C +A
Sbjct: 826 VVTYNTILHGLFQTGRFSEAKELYLSMINS-----RTQMNIYTYNIILNGLCKSNCVDEA 880
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
++F+ + + ++FN +I L K G +A +L+ + G+ PD TY L+ +
Sbjct: 881 FKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAEN 940
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
E +++ F M SG + + N LV +L+Q G + A ++
Sbjct: 941 LIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYL 989
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
+ D+A LF M K L ++ ++N + G GRF +A E++ M R +
Sbjct: 806 RIDDAYSLFREMLM-----KGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMN 860
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
++N +++ LCK+ + EA +++ + KG+ + T+ +++ A + R +D F
Sbjct: 861 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFA 920
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
+ +GL P++ Y + L++ G L+E F M K
Sbjct: 921 AIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEK 959
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG----MLAEAE---ELYGEMSDKG---VN 191
DA+++F ++ + ++FN+L+ + ++ +E+E L+ M V
Sbjct: 32 DALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVA 91
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P+ TY +L+ + ++ G F ++ +G R + V N+L+ L + EA
Sbjct: 92 PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEA--- 148
Query: 252 FDIMVKKLK-----MDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
D++++++ D SY ++K L + + +E LE++ + DD
Sbjct: 149 MDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADD 194
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 13/282 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y+ L G + D +F E++E VV + Y L+ GY G E+AM
Sbjct: 140 DRISYNMLTYGLCKADQIDRALAVFGEMEE--NAVVPSLLTYNGLLYGYCRAGRMEQAMT 197
Query: 69 CYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
E + + S V + N+V+ C + A + RM P N+ +
Sbjct: 198 LLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSP-----NVVT 252
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
FN + DG C G+ +A +F M E C P +++ LI + + +A + + +M
Sbjct: 253 FNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDML 312
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+GV P+ YTY L+ + N+V+D ++M +G PN+ Y R++G L + G ++
Sbjct: 313 RRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIE 372
Query: 247 EAKSFF-DIM---VKKLKMDDASYKFMMKALSDGGKLDEILE 284
A F D M K K D +Y ++ L K E E
Sbjct: 373 RATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYE 414
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+ L+AL G +A K+FD M + P N+ ++ ++ G C + A+E+
Sbjct: 41 NAYLNALVKGGHGSKARKIFDDMLYKECLP-----NIYTYGIVLRGLCDDAKTDAALELL 95
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ M +P T N L+ LCKNG + A ELY +SD+ + D +Y +L +
Sbjct: 96 QDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDE-CSLDRISYNMLTYGLCKA 154
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD 263
+++D F +M ++ + P+L YN L+ + G +++A + + M++ K D
Sbjct: 155 DQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSD 210
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
++N ++ L K G ++A +++ +M K P+ YTYG+++ + + D +
Sbjct: 38 FTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQD 97
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKL 279
M L P + N LV L + G +D A + + + +D SY + L ++
Sbjct: 98 MESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQI 157
Query: 280 DEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
D L + G + ++ + + G + GR E+ + L+E
Sbjct: 158 DRALAVFGEMEENAVVPSLLTYNGLLYG-YCRAGRMEQAMTLLE 200
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 17/290 (5%)
Query: 46 DGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK 105
D V +L+ G G + AM +E V + V N LC + DEA
Sbjct: 8 DTRVCTALLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTVVING-----LCREKRLDEAFS 62
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
+ +R P + ++NV DG C R DA ++ +KM E +C P T+++ L
Sbjct: 63 VLERAVRAGCEPDYV-----TYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTAL 117
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+D L K G L EA + +M +KG +P TY +++D + RV++ F M+ +G
Sbjct: 118 VDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGC 177
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-----KKLKMDDASYKFMMKALSDGGKLD 280
RP+ VY L+ L ++G LDEA + + MV + ++ D + +++ L G L+
Sbjct: 178 RPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLE 237
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKA 330
+ L + D ++ + + L K R EE + ++K +
Sbjct: 238 DALAYFDEL--DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRC 285
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 149/343 (43%), Gaps = 45/343 (13%)
Query: 50 YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR 109
Y SL+ G+ G +EA+ EAV E + AV S++D LC G+ +E + F
Sbjct: 292 YTSLVDGFLKLGRLDEALLQLKEAV-ERGFIP-DAVTYTSIIDGLCKLGRVEEGCERFHE 349
Query: 110 MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQL 169
M+N P + ++ + DG+ A V+R+M + T+++N ++D L
Sbjct: 350 MRNRGYEPDAV-----TYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 404
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPN 228
CK G +AEA + M ++G TY LMD C E N V FR+M+D G PN
Sbjct: 405 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGN-VSAAVELFRRMLDRGCEPN 463
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALS-------DGGKLD 280
L YN ++ L + G L +A +F+ ++ ++L D ++ + L DG +L
Sbjct: 464 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELF 523
Query: 281 EILE-------------IVGGILDDGGIEFSEEL-QEFVK--------------GELSKE 312
E + ++ GI GG+E + E+ E V L
Sbjct: 524 ESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIA 583
Query: 313 GREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLI 355
GR +E +++ + ER A +A R R A L+
Sbjct: 584 GRVDEALEVFRELERRSAPDAWSYWSLLDALSRCERMEEARLL 626
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 133/296 (44%), Gaps = 11/296 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK--LGGVVSDGVVYGSLMKGYF 58
M G D VY+ L+ G + G D ++ E GV D V++ +++
Sbjct: 172 MLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLC 231
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G E+A+ ++E + S+ ++ N ++ ALC + +EA+ +M P
Sbjct: 232 ASGNLEDALAYFDEL---DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFP- 287
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L ++ + DG+ GR +A+ ++ E PD +++ ++ID LCK G + E
Sbjct: 288 ----TLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEG 343
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E + EM ++G PD TY L+D + + +R+M+ SG + YN ++
Sbjct: 344 CERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDG 403
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L + G + EA + F M ++ +Y +M G + +E+ +LD G
Sbjct: 404 LCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 459
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 46/228 (20%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKG------- 56
+G VA V YS LM GF +G+ LF + ++ G + V Y +++G
Sbjct: 423 RGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR--GCEPNLVSYNIIIRGLCRAGKL 480
Query: 57 -----YFMKGMEE------------------------EAMECYNEAVGENSSVKMSAVAN 87
YF K ++ + +E + V + +S + +
Sbjct: 481 AKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSY-- 538
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+ ++D +C G + L++F M + P ++ FN + C GR +A+EVF
Sbjct: 539 SILMDGICRAGGLEVTLEIFHEMVSRGVAP-----DVVVFNTLIRWLCIAGRVDEALEVF 593
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
R++ E R +PD S+ +L+D L + + EA L M +G P Y
Sbjct: 594 REL-ERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAPRHY 640
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 127/249 (51%), Gaps = 13/249 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ GF + G + F+E+ E G+ + V Y +L+ G+ G +
Sbjct: 473 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE--CGLNPNPVSYTALIDGHSKDGKVD 530
Query: 65 EAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
A+ E +G N +V+ + N+V++ L +F EA K+ D+M + P
Sbjct: 531 IALSLLKRMEEMGCNPNVE----SYNAVINGLSKENRFSEAEKICDKMVEQGLLP----- 581
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ ++ + DG C GR + A ++F M + +C P+ ++++LI LC+ G EAE L
Sbjct: 582 NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILL 641
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM KG+ PDE T+ L+D + R+D R+MVD G +PN Y+ L+ L +
Sbjct: 642 KEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKE 701
Query: 243 GMLDEAKSF 251
+L E K F
Sbjct: 702 CLLLEEKIF 710
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 145/319 (45%), Gaps = 13/319 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEE-LKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
Y+ L+ G R G + L+ + LKE G+V + V Y +L+ + G A++ +
Sbjct: 340 TYTALISGLSRLGKLEVAIGLYHKMLKE---GLVPNTVTYNALINELCVGGRFSTALKIF 396
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ G S N ++ LC G ++A+ LF++M P + ++N +
Sbjct: 397 HWMEGHGSLANTQTY--NEIIKGLCLGGDIEKAMVLFEKMLKMGPLP-----TVVTYNTL 449
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+GY +G +A + M E C PD ++N L+ K G L A + EM + G+
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
NP+ +Y L+D + +VD + ++M + G PN+ YN ++ L + EA+
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569
Query: 251 FFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
D MV++ L + +Y ++ L G+ +I + + + G L
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG-L 628
Query: 310 SKEGREEEVVKLMEKKERE 328
+EG+ +E L+++ ER+
Sbjct: 629 CQEGKADEAEILLKEMERK 647
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 127/264 (48%), Gaps = 9/264 (3%)
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
M E A Y + + NS ++ S + N++++ L GK EA + ++ P
Sbjct: 178 MVEGARNLYKQML--NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSP---- 231
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ ++ + G+C A VF +M + C P++++++ LI+ LC G + EA ++
Sbjct: 232 -DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDM 290
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
EM +KG+ P YTY L + A + ++ +M G RPN+ Y L+ L +
Sbjct: 291 LEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR 350
Query: 242 VGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+G L+ A + M+K+ L + +Y ++ L GG+ L+I + G + ++
Sbjct: 351 LGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQT 410
Query: 301 LQEFVKGELSKEGREEEVVKLMEK 324
E +KG L G E+ + L EK
Sbjct: 411 YNEIIKG-LCLGGDIEKAMVLFEK 433
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 148/359 (41%), Gaps = 44/359 (12%)
Query: 8 ADP--VVYSYLMLGFVRDGDSDGVFRLFEELKE--------------------------- 38
DP V YS L+ G +G D + EE+ E
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 323
Query: 39 ------KLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLD 92
K G + Y +L+ G G E A+ Y++ + E + + V N++++
Sbjct: 324 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE--GLVPNTVTYNALIN 381
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
LC G+F ALK+F M+ + N ++N + G C G + A+ +F KM +
Sbjct: 382 ELCVGGRFSTALKIFHWMEGHGS-----LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 436
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
P +++N LI+ G + A L M + G PDE+TY L+ + +++
Sbjct: 437 MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 496
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
+ YF++MV+ GL PN Y L+ + G +D A S M + + SY ++
Sbjct: 497 ASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVIN 556
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKA 330
LS + E +I +++ G + + G L + GR + K+ E+ K
Sbjct: 557 GLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDG-LCRNGRTQFAFKIFHDMEKRKC 614
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 152/331 (45%), Gaps = 19/331 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+F D Y+ L+LG R+ + D F +F+ + ++ G + V Y +L+ G +
Sbjct: 224 IFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE--GCDPNSVTYSTLINGLCNE 281
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA++ E + ++ + + ALC +EA++L RMK P
Sbjct: 282 GRVDEALDMLEEMI--EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRP--- 336
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + G G+ + AI ++ KM + P+T+++N LI++LC G + A +
Sbjct: 337 --NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALK 394
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M G + TY ++ ++ F KM+ G P + YN L+ +
Sbjct: 395 IFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYL 454
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE----ILEIVGGILDDGGI 295
G ++ A D+M + + D+ +Y ++ S GKL+ E+V L+ +
Sbjct: 455 TKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 514
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
++ + G SK+G+ + + L+++ E
Sbjct: 515 SYT----ALIDGH-SKDGKVDIALSLLKRME 540
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 8/144 (5%)
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+S G Y+ L+ + V+ +++M++SG++P+L +N L+ L + G
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD----DGGIEFSE 299
+ EA+ I+ + + D + F +L G + L++ G+ D +G S
Sbjct: 213 KVREAEL---ILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269
Query: 300 ELQEFVKGELSKEGREEEVVKLME 323
+ G L EGR +E + ++E
Sbjct: 270 TYSTLING-LCNEGRVDEALDMLE 292
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 157/359 (43%), Gaps = 45/359 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V YS ++ +D + +F +K K G+ + Y SL++G
Sbjct: 257 GCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAK--GISPNIFTYNSLIQGLCNFSRWR 314
Query: 65 EAMECYNEAVGEN---------------------------------SSVKMSAVANNSVL 91
EA NE + N V+ + V +S++
Sbjct: 315 EASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM 374
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ + EA KLFD M + P ++ S+N++ +GYC R +A ++F +M
Sbjct: 375 NGYSLQAEVVEARKLFDVMITKGCKP-----DVFSYNILINGYCKAKRIGEAKQLFNEMI 429
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+PD +S+N LID LC+ G L EA +L+ M G PD TY +L+D + +
Sbjct: 430 HQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLA 489
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMM 270
FR M + L+PN+ +YN L+ + + L EA+ F ++ V+ L+ + Y ++
Sbjct: 490 KAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTII 549
Query: 271 KALSDGGKLDEILEIVGGILDDGGI--EFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
L G LDE LE + +DG EFS + ++G L + V + E +E+
Sbjct: 550 NGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNV--IIRGFLQHKDESRAVQLIGEMREK 606
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 133/280 (47%), Gaps = 10/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G+ D Y+ ++ G + G++ LF ++ E G D V Y +++
Sbjct: 218 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGE--AGCQPDVVTYSTIIDSLCKD 275
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA++ ++ + S + NS++ LCN ++ EA + + M + + P
Sbjct: 276 RRVNEALDIFSYMKAKGISPNI--FTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP--- 330
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +F+++ + +C +G +A V + M E P+ +++++L++ + EA +
Sbjct: 331 --NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARK 388
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M KG PD ++Y +L++ + R+ + F +M+ GL P++ YN L+ L
Sbjct: 389 LFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLC 448
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKL 279
Q+G L EA F M+ + D +Y ++ G L
Sbjct: 449 QLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYL 488
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 95/177 (53%), Gaps = 5/177 (2%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
++++ V N++++ LC GKF +A++LFD M P ++ ++ + +G C G
Sbjct: 188 LQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQP-----DVHTYTTIINGLCKIGE 242
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
A +FRKMGE C PD ++++ +ID LCK+ + EA +++ M KG++P+ +TY
Sbjct: 243 TVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNS 302
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
L+ +R + + +M+ + PN+ ++ L+ + G + EA+ M
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMT 359
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 9/196 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ G + G LF+ + G + D Y L+ G+ +
Sbjct: 428 MIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLT--NGNLPDLCTYSILLDGFCKQ 485
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + +++ +K + V N ++DA+C + EA KLF + + P
Sbjct: 486 GYLAKAFRLFRAM--QSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQP--- 540
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ + + +G C +G +A+E FR M E C P+ S+N +I ++ + A +
Sbjct: 541 --NVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQ 598
Query: 181 LYGEMSDKGVNPDEYT 196
L GEM +KG D T
Sbjct: 599 LIGEMREKGFVADVAT 614
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE-ELYGEMSDKGVNPDEYTYGLL 200
DA+ F M + P + FN L+ + K +A L +M G++PD YT +L
Sbjct: 104 DALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHML 163
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-L 259
++ F++ RVD G + K++ GL+ + +N L+ L +VG +A FD MV +
Sbjct: 164 INCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGY 223
Query: 260 KMDDASYKFMMKALSDGG 277
+ D +Y ++ L G
Sbjct: 224 QPDVHTYTTIINGLCKIG 241
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 128/274 (46%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++GD +F+ + + G+ V Y +LM GY G +
Sbjct: 137 GYPASLYFFNILMHRFCKEGDIRVAQSVFDAITK--WGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++ S V + +++ LC K D+A KLFD M K L N
Sbjct: 195 EGFRL--KSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLE-----KGLVPNS 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C G A+E++++M PD +++N LI LCK G L +A +L E
Sbjct: 248 VTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS G+ PD+ TY L+D C + +D + + M+ +R + Y L+ L Q G
Sbjct: 308 MSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGR 367
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 368 SVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKG 401
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D +LF+E+ EK G+V + V + +L+ G+
Sbjct: 203 MHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEK--GLVPNSVTFTTLIDGHCKN 260
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ V N+++ LC G +A L D M P ++
Sbjct: 261 GWVDLAMEIYKQMLSQ--SLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKI 318
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E + M + D +++ LI LC+ G +AE+
Sbjct: 319 -----TYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEK 373
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 374 MLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 123/282 (43%), Gaps = 19/282 (6%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF--MKGME 63
+V ++ +YL LGF+RD +RL E K + V+ + YF + G
Sbjct: 73 YVFSGLITAYLELGFLRDAID--CYRLTREHKFCVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EE +EC A S N ++ C G A +FD + P +
Sbjct: 131 EEILECGYPA---------SLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRP-----S 176
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S+N + +GY G + + M PD +++ LI+ LCK + +A +L+
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFD 236
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +KG+ P+ T+ L+D + VD +++M+ L P+L YN L+ L + G
Sbjct: 237 EMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKG 296
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILE 284
L +A D M + LK D +Y ++ G LD E
Sbjct: 297 DLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFE 338
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 18/248 (7%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC++ F EA L + + AV +
Sbjct: 12 NSTFRHTLHSYCAMIHFLCSHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSD 71
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYR-CSP-DTLSFNNLIDQLCKNGMLAEAEEL 181
+ F+ + Y G +DAI+ +R E++ C P DT +++ L K
Sbjct: 72 IYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTC--RKVLEHLMKLKYFKLVWGF 129
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
Y E+ + G Y + +LM + + + F + GLRP++ YN L+ ++
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 242 VGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+G LDE M + D +Y ++ L K+D+ ++ +L+ G + S
Sbjct: 190 LGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVT 249
Query: 301 LQEFVKGE 308
+ G
Sbjct: 250 FTTLIDGH 257
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + + V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A +LFD M + P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 110/231 (47%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + +V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD--NXLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A + ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + + F + LRP++ +N L+ +++G LD
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E + M ++ D +Y ++ L K+D+ E+ +LD+ + +
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLI 248
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 249 DGH-CKNGR 256
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 147/313 (46%), Gaps = 16/313 (5%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
P V++Y L+ GF G+ D R F+ +++K G + + V Y +L+ GY ++
Sbjct: 201 VSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKK--GCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
E + ++ + ++ N V++ LC G+ E + M + +++
Sbjct: 259 GFELLRSMALK--GLEPNLISYNVVINGLCREGRMKEISFVLTEMNK-----RGYSLDEV 311
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + GYC +G F A+ + +M + SP +++ +LI +CK G + A E +M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM 371
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV-GKLVQVGM 244
+G+ P+E TY L+D + +++ ++M+D+G P++ YN L+ G + M
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKM 431
Query: 245 LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEE 300
+D D+ K L D SY ++ +DE L + ++ G I +S
Sbjct: 432 VDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSL 491
Query: 301 LQEFVKGELSKEG 313
+Q F + +KE
Sbjct: 492 IQGFCEQRRTKEA 504
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 160/355 (45%), Gaps = 26/355 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G + Y+ L+ GF + G + +R+ +E+ + G V Y +L+ G+ +
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMID--NGFSPSVVTYNALINGHCIA 428
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A+ + + + V+ ++VL C + DEAL++ +M + P +
Sbjct: 429 GKMVDAIAVLEDM--KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTI 486
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ + G+C Q R K+A ++F +M PD ++ LI+ C G L +A +
Sbjct: 487 -----TYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQ 541
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM +KGV PD TY +L++ + R + K+ P+ Y+ L+
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Query: 241 QV---------------GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILE 284
+ GM+ EA F+ M++K K D +Y M+ GG + +
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYS 661
Query: 285 IVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+ ++ G + + + VK L KEG+ E+ ++ R ++A +A+
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVK-TLHKEGKVNELNSVIANVLRSCELSEAEQAKV 715
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 139/312 (44%), Gaps = 35/312 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG + + Y+ ++ G R+G + + E+ ++ G D V Y +L+KGY +
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKR--GYSLDEVTYNTLIKGYCKE 323
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEH 114
G +A+ + E + S S + S++ ++C G + A + D+M+ NE
Sbjct: 324 GNFHQALVMHAEMLRHGLSP--SVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNER 381
Query: 115 ---------------NPPKRL---------AVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
N R+ + ++ ++N + +G+C G+ DAI V M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDM 441
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E +PD +S++ ++ C++ + EA + +M KG+ PD TY L+ E R
Sbjct: 442 KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRT 501
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFM 269
+ F +M+ GL P+ Y L+ G L +A + MV+K + D +Y +
Sbjct: 502 KEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVL 561
Query: 270 MKALSDGGKLDE 281
+ L+ + E
Sbjct: 562 INGLNKQARTRE 573
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + Y+ L+ + G+ + ++++ + G+ + Y +L+ G+ K
Sbjct: 336 MLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVR--GLCPNERTYTTLVDGFSQK 393
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA E + S S V N++++ C GK +A+ + + MK K L
Sbjct: 394 GYMNEAYRVLKEMIDNGFSP--SVVTYNALINGHCIAGKMVDAIAVLEDMKE-----KGL 446
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S++ + G+C +A+ V RKM PDT+++++LI C+ EA +
Sbjct: 447 TPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L+ EM G+ PDE+TY L++A C E + +MV+ G+ P++ Y+ L+ L
Sbjct: 507 LFDEMLRVGLPPDEFTYTALINAYCME-GDLQKAIQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 240 VQVGMLDEAKSFF 252
+ EAK
Sbjct: 566 NKQARTREAKRLL 578
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 127/308 (41%), Gaps = 47/308 (15%)
Query: 23 DGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKM 82
D D+ VFR L+E S V+ ++K Y + ++A+ + + +
Sbjct: 113 DEDASLVFR---SLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVH--LSQAHGFMP 167
Query: 83 SAVANNSVLDALCNNGK-FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
++ N+VLDA + + A +F M P N+ ++N++ G+C G
Sbjct: 168 GVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSP-----NVFTYNILIRGFCLAGNLD 222
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLID---------------------------------- 167
A+ F +M + C P+ +++N LID
Sbjct: 223 VALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVI 282
Query: 168 -QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
LC+ G + E + EM+ +G + DE TY L+ + +M+ GL
Sbjct: 283 NGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLS 342
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
P++ Y L+ + + G ++ A F D M V+ L ++ +Y ++ S G ++E +
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 286 VGGILDDG 293
+ ++D+G
Sbjct: 403 LKEMIDNG 410
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 157/354 (44%), Gaps = 42/354 (11%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+LG R+ D + +F + +K G + V Y +L+ G G
Sbjct: 224 GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQK--GCQRNEVSYTNLIHGLCEAGRIN 281
Query: 65 EAMECYNEAVGENS-------SVKMSAVANNS--------------------------VL 91
EA++ + + +N +V + A++ + ++
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLI 341
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
D LC K DEA K+ M K L ++ ++N + DGYC +G DA E+ M
Sbjct: 342 DGLCKENKMDEARKMLSEMSE-----KGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
C P+T ++N LI LCK + +A L +M ++ ++P TY L+ +VN ++
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMM 270
M ++GL P+ Y+ + L + G ++EA + FD + K +K ++ Y ++
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
GK+D ++ +L+D + S ++G L KE + +E L+ K
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG-LCKEKKMKEASSLVAK 569
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 148/328 (45%), Gaps = 52/328 (15%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+P V++Y +L G ++ D ++ E+ EK G++ V Y +L+ GY +GM ++
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK--GLIPSVVTYNALIDGYCKEGMIDD 387
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A E + + E++S + N ++ LC K +A+ L ++M ++L+ +L
Sbjct: 388 AFEILD--LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE-----RKLSPSLI 440
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + G C + A + M E PD +++ ID LCK G + EA L+ +
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV 500
Query: 186 SDKGVN-----------------------------------PDEYTYGLLMDACFEVNRV 210
KGV P+ YTY +L++ + ++
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+ ++ KM+ G++P + Y L+G++++ G D A F+ MV + D +Y
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620
Query: 270 MKALSDGGKLDEILEIVG-----GILDD 292
+ A G L+E+ +++ GIL D
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPD 648
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 9/246 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ Y+ L+ G + D + +RL + E G+V D Y + +G EEA +
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNE--NGLVPDQWTYSVFIDTLCKEGRVEEAGTLF 497
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + VK + V +++D C GK D A L +RM N+ P N ++NV+
Sbjct: 498 DSV--KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLP-----NSYTYNVL 550
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G C + + K+A + KM P +++ LI ++ K+G A +++ M G
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGY 610
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD TY + A F +++ KM + G+ P+L Y L+ ++G+ A
Sbjct: 611 QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFD 670
Query: 251 FFDIMV 256
F MV
Sbjct: 671 FLKCMV 676
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 12/231 (5%)
Query: 30 FRLFEELK----EKLGGVVSDGV-VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSA 84
F L +E+K E L +S + + +++ GY G EA E Y + + + +
Sbjct: 172 FLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA-ELYASKIVQ-AGLHPDT 229
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
S++ C N D A ++F M P K N S+ + G C GR +A+
Sbjct: 230 FTYTSLILGHCRNKGVDNAYEVFLIM-----PQKGCQRNEVSYTNLIHGLCEAGRINEAL 284
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
++F M E C P ++ LI L +G EA L+ EM +KG P+ +TY +L+D
Sbjct: 285 KLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+ N++D+ +M + GL P++ YN L+ + GM+D+A D+M
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 16/230 (6%)
Query: 143 AIEVFRKM---GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+EVFRKM GE++ P +N ++ L K ++ E + +Y E+ + ++P+ YT+
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
+++ ++ V + Y K+V +GL P+ Y L+ + +D A F IM +K
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
+ ++ SY ++ L + G+++E L++ + +D + LS GR+ E
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYA-LSGSGRKVEA 318
Query: 319 VKLMEKKEREKAEAK-----------AREAEAAEAAKRSARAAIASLIPS 357
+ L + + + E +E + EA K + + LIPS
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPS 368
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 123/311 (39%), Gaps = 29/311 (9%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V Y+ L+ ++DG D ++F + G D Y + + YF +
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL--GYQPDVCTYTAFLHAYFSQ 627
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM EE + A + V ++D G A M + P
Sbjct: 628 GMLEEVDDVI--AKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLY 685
Query: 121 AVNLGSFNVMADGYCGQGR------------------------FKDAIEVFRKMGEYRCS 156
V++ N+ + + R ++ A+++F KM E+ C+
Sbjct: 686 IVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCT 745
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
D + LI C+ L EA+ L M ++G++P E Y L+D C ++ +
Sbjct: 746 IDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRL 805
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSD 275
MV++GL P L Y LV L G ++AK+ F ++ D+ ++K ++ L
Sbjct: 806 VDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLK 865
Query: 276 GGKLDEILEIV 286
+DE E++
Sbjct: 866 RDLVDECSELI 876
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 19/257 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + D V Y+ L+ G+ R G + R F+ LK +V G + +K +
Sbjct: 643 EGILPDLVTYTVLIDGYARLGLTH---RAFDFLK----CMVDTGCKPSLYIVSILIKNLS 695
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDA--LCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E N S + + +V+N + +D + +++ ALKLF++M EH
Sbjct: 696 HE-----NRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMV-EHG----CT 745
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+++ + + G+C Q R ++A + M E SP +N+L+D CK G+ AEA L
Sbjct: 746 IDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRL 805
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M + G+ P +Y LL+ + + F ++ G + + L+ L++
Sbjct: 806 VDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLK 865
Query: 242 VGMLDEAKSFFDIMVKK 258
++DE DIM +K
Sbjct: 866 RDLVDECSELIDIMEEK 882
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 97/235 (41%), Gaps = 41/235 (17%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC------------ 135
N++L +L DE ++ + N P N+ +FN M +GYC
Sbjct: 163 NTILMSLSKFLLIDEMKTVYLELLNNQISP-----NIYTFNAMVNGYCKIGNVVEAELYA 217
Query: 136 --------------------GQGRFK---DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
G R K +A EVF M + C + +S+ NLI LC+
Sbjct: 218 SKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEA 277
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
G + EA +L+ +M++ P TY +L+ A R + F +M + G PN+ Y
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTY 337
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
L+ L + +DEA+ M +K L +Y ++ G +D+ EI+
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL 392
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 138/290 (47%), Gaps = 10/290 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V + L+ GF R +F+ + E G + V+Y +++ G +
Sbjct: 146 GHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM--GYEPNVVIYNTIIDGLCKSKQVD 203
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ N E ++ AV NS++ LCN+G++D+A ++ M P ++
Sbjct: 204 NALDLLNRM--EVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYP-----DV 256
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN + D +GR +A E++ +M PD ++++ LI LC L EAE+++G
Sbjct: 257 FTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGF 316
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG PD TY +L++ + +V+ G F +M G+ N Y L+ + G
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGK 376
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L+ A+ F MV + + +Y ++ L D GK+++ L I+ + G
Sbjct: 377 LNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSG 426
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 8/241 (3%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
V S+L+ C + +AL +FDRM P N+ +N + DG C + +A+
Sbjct: 152 VTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEP-----NVVIYNTIIDGLCKSKQVDNAL 206
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
++ +M PD +++N+LI LC +G +A + M+ + + PD +T+ L+DAC
Sbjct: 207 DLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD- 263
+ R+ + + +M+ L P++ Y+ L+ L LDEA+ F MV K D
Sbjct: 267 VKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDV 326
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELS--KEGREEEVVKL 321
+Y ++ K++ +++ + G + + ++G K EE+ K
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKW 386
Query: 322 M 322
M
Sbjct: 387 M 387
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 9/228 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D V YS L+ G D ++F + K G D V Y L+ GY
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSK--GCFPDVVTYSILINGYCKS 339
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E M+ + E V + V ++ C GK + A ++F M PP
Sbjct: 340 KKVEHGMKLFCEM--SQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPP--- 394
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++NV+ G C G+ + A+ + M + D +++N +I +CK G +A+A +
Sbjct: 395 --NIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWD 452
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
LY ++ KG+ PD +TY +M ++ + FRKM + G+ PN
Sbjct: 453 LYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V YS L+ G+ + + +LF E+ ++ GVV + V Y L++GY
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR--GVVRNTVTYTVLIQGYCRA 374
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A E + V V + + N +L LC+NGK ++AL + M+ +
Sbjct: 375 GKLNVAEEIFKWMVF--CGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSG-----M 427
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N++ G C G DA +++ + +PD ++ ++ L K G+ EA+
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADA 487
Query: 181 LYGEMSDKGVNPDE 194
L+ +M + G+ P+E
Sbjct: 488 LFRKMKEDGILPNE 501
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 38/292 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V G D V Y+ L+ G G D R+ + ++ + D + +L+ +
Sbjct: 212 MEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKR--EIYPDVFTFNALIDACVKE 269
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM---------- 110
G EA E Y E + S+ V + ++ LC + DEA ++F M
Sbjct: 270 GRISEAEELYEEMI--RRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVV 327
Query: 111 -------------KNEHN-------PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
K EH + + N ++ V+ GYC G+ A E+F+ M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWM 387
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
P+ +++N L+ LC NG + +A + +M G++ D TY +++ + V
Sbjct: 388 VFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEV 447
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMD 262
D + + GL P++ Y ++ L + G+ EA + F +K+K D
Sbjct: 448 ADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALF----RKMKED 495
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 96/202 (47%), Gaps = 7/202 (3%)
Query: 82 MSAVANNS-VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRF 140
+ ++A+ S +L A+ K+D + L+++M+ P NL + N++ + +C +
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPH-----NLCTCNILLNCFCRCSQL 132
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
A+ KM + PD ++F +L++ C+ + +A ++ M + G P+ Y +
Sbjct: 133 SLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTI 192
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-L 259
+D + +VD+ +M G+RP+ YN L+ L G D+A M K+ +
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREI 252
Query: 260 KMDDASYKFMMKALSDGGKLDE 281
D ++ ++ A G++ E
Sbjct: 253 YPDVFTFNALIDACVKEGRISE 274
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 83/192 (43%), Gaps = 5/192 (2%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ D++++F M + R P F+ L+ + K L+ +M G+ + T
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+L++ +++ ++ KM+ G P++ + L+ + + +A FD MV+
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180
Query: 259 -LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+ + Y ++ L ++D L+++ + DG + + G L GR ++
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISG-LCNSGRWDD 239
Query: 318 ---VVKLMEKKE 326
+V M K+E
Sbjct: 240 ATRMVSCMTKRE 251
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++G+ +F+ +++ G+ V + +LM GY +G +
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRK--WGLRPSVVSFNTLMNGYIRQGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ ++ S V+ + +++ LC K DEA +LF M + K L N
Sbjct: 189 KGFRL--KSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLD-----KGLVPNG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C G+ A+E++++M SPD +++N LI LCK G L +A L E
Sbjct: 242 VTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M++ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKG 395
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 110/231 (47%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF E+ +K G+V +GV + +L+ G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDK--GLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L + M + P ++
Sbjct: 255 GKVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C G + A E ++M E D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ PD TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 418
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 79/200 (39%), Gaps = 36/200 (18%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGE--YRCSPDTLS----------------------- 161
F+ + Y G +DAIE +R E +R DT
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL 128
Query: 162 ----------FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
FN L+ + CK G + ++ ++ + G+ P ++ LM+ +D
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLD 188
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
G M SG++P++ Y+ L+ L + +DEA F M+ K L + ++ ++
Sbjct: 189 KGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLI 248
Query: 271 KALSDGGKLDEILEIVGGIL 290
GK+D +EI +L
Sbjct: 249 DGHCKNGKVDLAMEIYKQML 268
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 141/296 (47%), Gaps = 12/296 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF + ++ L+ G R+ + L E++ ++ D Y ++++G F +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRR--NSLMPDVFSYNTVIRG-FCE 189
Query: 61 GME-EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G E E+A+E NE G S S V ++DA C GK DEA+ MK
Sbjct: 190 GKELEKALELANEMKGSGCS--WSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG----- 242
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L +L + + G+C G +F ++ E SP +++N LI CK G L EA
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
E++ M ++GV P+ YTY L+D V + + M++ PN YN ++ KL
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKL 362
Query: 240 VQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+ G++ +A ++M K + + D+ +Y ++ L G LDE +++ +L D
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 134/287 (46%), Gaps = 14/287 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y+ L+ G GD D +L + + D + Y +L+ G + +A++
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 69 CYNEAVGENSSVKMSA---VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
Y+ V K+ A V N +L++ G ++A++L+ ++ + ++ N
Sbjct: 446 IYDLLVE-----KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDS-----KIVRNSD 495
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ M DG+C G A + KM P +N L+ LCK G L +A L+ EM
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
PD ++ +++D + + + M +GL P+L Y++L+ + +++G L
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
DEA SFFD MV + D ++K G+ D++ E+V ++D
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 78/205 (38%), Gaps = 37/205 (18%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
A N+ + N++ G C A+ + R+M PD S+N +I C+ L +A
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL EM G + T+G+L+DA
Sbjct: 198 ELANEMKGSGCSWSLVTWGILIDA-----------------------------------F 222
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ G +DEA F M L+ D Y +++ D G+LD + +L+ G +
Sbjct: 223 CKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 299 EELQEFVKGELSKEGREEEVVKLME 323
++G K G+ +E ++ E
Sbjct: 283 ITYNTLIRG-FCKLGQLKEASEIFE 306
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 12/277 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF KGF+ D YS L+ G DGD + +F E EK G ++Y +L+KG +
Sbjct: 348 MF-KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK--GFKHSIILYNTLVKGLSKQ 404
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G+ +A++ + + S + N V++ LC G +A + + + P
Sbjct: 405 GLVLQALQLMKDMMEHGCSPDIWTY--NLVVNGLCKMGCLSDANGILNDAIAKGCIP--- 459
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +FN + DGYC Q AIE+ M + +PD +++N L++ LCK L +
Sbjct: 460 --DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVD 517
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M +KG P+ TY +L+++ + +V + F++M GL P++ L+ L
Sbjct: 518 TFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLC 577
Query: 241 QVGMLDEAKSFFDIMVK--KLKMDDASYKFMMKALSD 275
G LD+A F + K K A + M+ A +
Sbjct: 578 SNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCE 614
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 8/227 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + Y+ L+ G + D V F+ + EK G + + Y L++ +
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK--GCTPNIITYNILIESFCKD 544
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EAME + E + + V +++ LC+NG+ D+A +LF ++ E+ +
Sbjct: 545 RKVSEAMELFKEM--KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY----KF 598
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ + FN+M + +C + A ++F KMG C+PD ++ +ID CK G + A
Sbjct: 599 SYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHT 658
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
E KG+ P T G +++ +R+ + MV +G+ P
Sbjct: 659 FLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 133/286 (46%), Gaps = 14/286 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
+ V Y ++ GF ++ + LF+E+ ++ G+ D + + L+ KG +E+ +
Sbjct: 180 NAVSYCAVISGFYKENCQIEAYHLFDEMLKQ--GICPDILTFNKLIHVLCKKGNVQESEK 237
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+++ + V + N + LC G DEA +L + + +E P ++ S+N
Sbjct: 238 LFSKVMKR--GVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTP-----DVISYN 290
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ G+C + +A KM P+ ++N +I+ CK GM+ A+++ + K
Sbjct: 291 TLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFK 350
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G PDE+TY L++ ++ F + ++ G + ++ +YN LV L + G++ +A
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQA 410
Query: 249 KSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
D+M D +Y ++ L G L + GIL+D
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD----ANGILNDA 452
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 118/255 (46%), Gaps = 10/255 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + D ++ L+ G+ + + D + + + G+ D + Y +L+ G
Sbjct: 455 KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH--GITPDVITYNTLLNGLCKARKL 512
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ ++ + + + + + + N ++++ C + K EA++LF MK + L +
Sbjct: 513 DNVVDTFKAMLEKGCTPNI--ITYNILIESFCKDRKVSEAMELFKEMKT-----RGLTPD 565
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ + + G C G A E+F + EY+ S T FN +I+ C+ ++ AE+L+
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLF 625
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M PD YTY +++D+ + +D T+ + + GL P+ +++ L
Sbjct: 626 HKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVT 685
Query: 243 GMLDEAKSFFDIMVK 257
L EA ++MV+
Sbjct: 686 HRLSEAVVIINLMVQ 700
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 141/341 (41%), Gaps = 69/341 (20%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
VY +M+ Y KG +EA+ + + + S + N++++ L G F +A K++
Sbjct: 78 VYIGIMRDYGRKGKVQEAVNVFERM--DFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYM 135
Query: 109 RMKNEHNPPK--RLAVNLGSFNVM---------------------ADGYCG--QGRFKD- 142
RMK+ P + + SF + A YC G +K+
Sbjct: 136 RMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKEN 195
Query: 143 ----AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
A +F +M + PD L+FN LI LCK G + E+E+L+ ++ +GV P+ +T+
Sbjct: 196 CQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255
Query: 199 LLMDACFEVNRVDDGA-----------------------------------TYFRKMVDS 223
+ + +D+ A Y KMV+S
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
G+ PN YN ++ + GM+ A K D M K D+ +Y ++ L + G ++
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Query: 283 LEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+ + ++ G VKG LSK+G + ++LM+
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKG-LSKQGLVLQALQLMK 415
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 139/290 (47%), Gaps = 10/290 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G ++ + + +L GG+ DG Y +L+ GY GM +
Sbjct: 281 GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVN--GGLEPDGFTYNTLIDGYCKMGMLQ 338
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + A+ + S+++ LC N + D AL LF+ + P +
Sbjct: 339 NAEKILQGAICK--GFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVIL--- 393
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+N++ G C +G A+++ +M E CS D ++N +I+ LCK G +++A L +
Sbjct: 394 --YNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMND 451
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
KG PD +T+ L+D + +++ KM G+ P++ YN ++ L +
Sbjct: 452 AIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVK 511
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++ F+ MV+K + +Y + ++L GK++E L++V IL+ G
Sbjct: 512 NEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKG 561
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 10/255 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG+V D ++ L+ G+ + + ++ ++ GV D + Y S++ G
Sbjct: 455 KGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSH--GVTPDVITYNSVLNGLSKAVKN 512
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+ ME + E + E V + + N + ++LC GK +EAL L D + N+ P +
Sbjct: 513 EDLMETF-ETMVEKGCVP-NKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTV--- 567
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGE-YRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
SF + G+ G K A ++FR+MGE Y+ S T ++N +I+ + L E+L+
Sbjct: 568 --SFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLF 625
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM G PD YTY +++D D G + +M++ G P+L + R++ L
Sbjct: 626 LEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQ 685
Query: 243 GMLDEAKSFFDIMVK 257
+ EA MV
Sbjct: 686 HRVHEAVDIIHFMVH 700
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 134/282 (47%), Gaps = 15/282 (5%)
Query: 2 FVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
KGFV D Y L+ G ++ + D LF K G+ ++Y L+KG +G
Sbjct: 348 ICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGK--GLKPTVILYNMLIKGLCQEG 405
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKRL 120
+ +A++ NE S + N V++ LC G +A L D + + P
Sbjct: 406 LILQALQMMNEMSENGCSSDIWTY--NLVINGLCKMGCVSDANNLMNDAIAKGYVP---- 459
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +FN + DGYC Q + + I++ KM + +PD +++N++++ L K + E
Sbjct: 460 --DVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLME 517
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M +KG P++ TY +L ++ + +V++ ++++ G+ P+ + ++
Sbjct: 518 TFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFA 577
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD--ASYKFMMKALSDGGKLD 280
G L A F M ++ K+ A+Y M+ A ++ KLD
Sbjct: 578 NNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAE--KLD 617
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 142/356 (39%), Gaps = 46/356 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V D ++ + F R RL + + G + V Y +++ G++ +
Sbjct: 141 GIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQ--GCQLNAVAYCTVVAGFYEENYRV 198
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA E +N+ + +S N +L LC G+ E+ +L +++ K + NL
Sbjct: 199 EAYELFNDMLRIGIFPDVSTF--NKLLHTLCKKGEVQESERLLNKVLK-----KGMCSNL 251
Query: 125 GSFNVMADGYCGQGRFKDAIEVF-----------------------------------RK 149
+FN+ G C +G A+ + K
Sbjct: 252 FTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHK 311
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
+ PD ++N LID CK GML AE++ KG PDE+TY L++ + +
Sbjct: 312 LVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDE 371
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+D F + GL+P + +YN L+ L Q G++ +A + M + D +Y
Sbjct: 372 IDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNL 431
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ L G + + ++ + G + + G K+ + E ++++ K
Sbjct: 432 VINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDG-YCKQLKMETTIQILNK 486
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 139/309 (44%), Gaps = 17/309 (5%)
Query: 5 GFVADPVVYSYLM--LGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
GF + Y ++ LGF G+ + + E + + + +GV G+ MK Y KG
Sbjct: 35 GFKHSLLTYKCIIQKLGF--HGNFVAMENVLAETRMDIDNSLLEGVYIGA-MKSYGRKGK 91
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+EA++ + N + S ++ N++++ L +G F +A K+F RMKN P
Sbjct: 92 VQEAVDVFERMDFYNC--EPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVP----- 144
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ +F + +C R A+ + M C + +++ ++ + EA EL+
Sbjct: 145 DVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELF 204
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M G+ PD T+ L+ + V + K++ G+ NL +N + L +
Sbjct: 205 NDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRK 264
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE----ILEIVGGILDDGGIEF 297
GML A S D ++++ L D +Y ++ L + E + ++V G L+ G +
Sbjct: 265 GMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTY 324
Query: 298 SEELQEFVK 306
+ + + K
Sbjct: 325 NTLIDGYCK 333
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 92/196 (46%), Gaps = 2/196 (1%)
Query: 134 YCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD 193
Y +G+ ++A++VF +M Y C P LS+N +++ L ++G +A +++ M + G+ PD
Sbjct: 86 YGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPD 145
Query: 194 EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
YT+ + + + R MV G + N Y +V + EA F+
Sbjct: 146 VYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFN 205
Query: 254 IMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE 312
M++ + D +++ ++ L G++ E ++ +L G F++G L ++
Sbjct: 206 DMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQG-LCRK 264
Query: 313 GREEEVVKLMEKKERE 328
G + +++ RE
Sbjct: 265 GMLSGAMSMLDSVIRE 280
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 120/239 (50%), Gaps = 10/239 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D +Y+ LM G + G LF E+ ++ ++ D VY +L+ G+ G
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR--NILPDAYVYATLIDGFIRSGDF 501
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + ++ +V VK+ V +N+++ C +G DEAL +RM EH P +
Sbjct: 502 DEARKVFSLSV--EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKF--- 556
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++ + DGY Q AI++FR M + +C P+ +++ +LI+ C G AEE +
Sbjct: 557 --TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFK 614
Query: 184 EMSDKGVNPDEYTYGLLMDACF-EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
EM + + P+ TY L+ + E + ++ Y+ M+ + PN +N L+ V+
Sbjct: 615 EMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 128/282 (45%), Gaps = 10/282 (3%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+KGF+ + ++ GF ++GD RL E+KE+ G+ +++ + G
Sbjct: 268 LKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKER--GLRVSVWFLNNIIDAKYRHGY 325
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+ + E + + K N +++ LC GK + A+ D + P L
Sbjct: 326 KVDPAESIGWIIANDC--KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNL-- 381
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
S+ + YC + A ++ +M E C PD +++ LI L +G + +A +
Sbjct: 382 ---SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
++ D+GV+PD Y +LM + R F +M+D + P+ VY L+ ++
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS 498
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
G DEA+ F + V+K +K+D + M+K G LDE L
Sbjct: 499 GDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL 540
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 137/280 (48%), Gaps = 12/280 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + + V Y+ ++ G+ + GD + + +F+ELK L G + +G+++ G+ +G
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELK--LKGFMPTLETFGTMINGFCKEGDF 291
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNG-KFDEALKLFDRMKNEHNPPKRLAV 122
+ +E + +++S N+++DA +G K D A + + N+ P
Sbjct: 292 VASDRLLSEV--KERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKP------ 343
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ ++N++ + C +G+ + A+ + + P+ LS+ LI CK+ A +L
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M+++G PD TYG+L+ +DD K++D G+ P+ A+YN L+ L +
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDE 281
G AK F M+ + + DA Y ++ G DE
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDE 503
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 127/275 (46%), Gaps = 28/275 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + D VY+ L+ GF+R GD D ++F EK GV D V + +++KG+
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEK--GVKVDVVHHNAMIKGFCRS 533
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
GM +EA+ C N E+ + ++++D A+K+F M KN+ P
Sbjct: 534 GMLDEALACMNRMNEEH--LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP--- 588
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ ++ + +G+C QG FK A E F++M P+ +++ LI L K E
Sbjct: 589 ---NVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645
Query: 180 ELYGE--MSDKGVNPDEYTYGLLMDACF-----EVNRVDDGAT---------YFRKMVDS 223
Y E M++K V P+E T+ L+ +V DG+ +F +M
Sbjct: 646 VYYWELMMTNKCV-PNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSD 704
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
G + A YN + L GM+ A F D MVKK
Sbjct: 705 GWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKK 739
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 125/272 (45%), Gaps = 10/272 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + + + Y+ L+ + + + D +L ++ E+ G D V YG L+ G + G
Sbjct: 374 KGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAER--GCKPDIVTYGILIHGLVVSGHM 431
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+ + + + V A N ++ LC G+F A LF M + + P
Sbjct: 432 DDAVNMKVKLI--DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYV-- 487
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + DG+ G F +A +VF E D + N +I C++GML EA
Sbjct: 488 ---YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMN 544
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M+++ + PD++TY ++D + + FR M + +PN+ Y L+ G
Sbjct: 545 RMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQG 604
Query: 244 MLDEA-KSFFDIMVKKLKMDDASYKFMMKALS 274
A ++F ++ ++ L + +Y ++++L+
Sbjct: 605 DFKMAEETFKEMQLRDLVPNVVTYTTLIRSLA 636
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 10/177 (5%)
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
A +S L L F+E + ++NE+ + + + + + Y G A+E
Sbjct: 101 ACSSFLKLLARYRIFNEIEDVLGNLRNEN-----VKLTHEALSHVLHAYAESGSLSKAVE 155
Query: 146 VFRKMGE-YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
++ + E Y PD ++ N+L+ L K+ L +A ++Y EM D+G + D Y+ +L+
Sbjct: 156 IYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGM 215
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
+V+ G G PN+ YN ++G ++G ++ A F K+LK+
Sbjct: 216 CNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVF----KELKL 268
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 46/256 (17%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP-PKRLAVN----------- 123
N +VK++ A + VL A +G +A++++D + ++ P +A N
Sbjct: 126 RNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRR 185
Query: 124 LG-------------------SFNVMADGYCGQGRFKDAIEVFRKMGEYR----CSPDTL 160
LG S ++ G C +G+ +EV RK+ E R C P+ +
Sbjct: 186 LGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGK----VEVGRKLIEGRWGKGCIPNIV 241
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRK 219
+N +I CK G + A ++ E+ KG P T+G +++ C E + V +
Sbjct: 242 FYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL-LSE 300
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGM-LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGK 278
+ + GLR ++ N ++ + G +D A+S I+ K D A+Y ++ L GK
Sbjct: 301 VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGK 360
Query: 279 LDEILEIVGGILDDGG 294
E+ G LD+
Sbjct: 361 ----KEVAVGFLDEAS 372
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 124/313 (39%), Gaps = 87/313 (27%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRD---GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G V + V Y+ LM G GD+ VF E + G + Y +L+ GY
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQME-----INGCCPNVRTYSALIDGY 396
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G + A E +N + + VA ++D LC N F++A L + M+ E+ PP
Sbjct: 397 AKAGDLDGASEVWNWMITH--GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPP 454
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQL-------- 169
N +FN G CG GR AI+VF +MG C P+T ++N L+D L
Sbjct: 455 -----NTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGE 509
Query: 170 ---------------------------CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
C GML EA EL G+M +G PD T +++D
Sbjct: 510 AFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVID 569
Query: 203 A------------------------------------CFEVNRVDDGATYFRKMVDSGLR 226
A C + V++ Y R+M+ G+
Sbjct: 570 AYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIG-VEEAIVYLRRMLSEGIS 628
Query: 227 PNLAVYNRLVGKL 239
PN+A +N LV L
Sbjct: 629 PNVATWNVLVRHL 641
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 18/326 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF +G + ++ L+ GF G S ++ + + GVV + V Y +LM G K
Sbjct: 307 MFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE--GVVPNVVAYNALMHGLCSK 364
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A+ +N+ E + + ++++D G D A ++++ M P
Sbjct: 365 RSLGDAVSVFNQM--EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHP--- 419
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ M D C F A + M C P+T++FN I LC +G + A +
Sbjct: 420 --NVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIK 477
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M + G P+ TY L+D+ + R + + M G+ NL YN ++
Sbjct: 478 VFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYC 537
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV----GGILDDGGI 295
GML EA ++V+ K D + ++ A GK++ ++++ G I
Sbjct: 538 CAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDII 597
Query: 296 EFSEELQEFVKGELSKEGREEEVVKL 321
++ + G + G EE +V L
Sbjct: 598 AYT----SLISGICTHIGVEEAIVYL 619
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 138/319 (43%), Gaps = 18/319 (5%)
Query: 9 DPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+P V++Y L+ ++ DG +L E+ K G D V Y +L+ G +EA
Sbjct: 178 EPNVFTYNILLKALCKNNRVDGAHKLLVEMSSK--GCDPDEVSYTTLISSLCKLGKVKEA 235
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
E A+ SV + N++++ +C F+EA +L D M N+ P N+ S
Sbjct: 236 REL---AMSFTPSVPVY----NALINGVCKEYTFEEAFQLLDEMMNKGIDP-----NVIS 283
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+ + + G + ++ V KM CSP+ +F +LI G EA + + M
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+GV P+ Y LM + D + F +M +G PN+ Y+ L+ + G LD
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
A ++ M+ + +Y M+ L ++ ++ + + + F+
Sbjct: 404 GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463
Query: 306 KGELSKEGREEEVVKLMEK 324
KG L GR + +K+ ++
Sbjct: 464 KG-LCGSGRVDWAIKVFDQ 481
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 21/236 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+ + V ++ + G G D ++F+++ G + Y L+ +K
Sbjct: 447 MQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGN--SGCFPNTTTYNELLDS-LLK 503
Query: 61 GMEEEAMECYNEAVG-----ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
+ EA G E+ ++++ V N+++ C G EAL+L +M
Sbjct: 504 DRR------FGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P + VN ++ D YC QG+ AI++ ++ + PD +++ +LI +C + +
Sbjct: 558 KPDAITVN-----IVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGV 612
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
EA M +G++P+ T+ +L+ F N GA F S ++P V
Sbjct: 613 EEAIVYLRRMLSEGISPNVATWNVLVRHLFS-NMGHSGAVQFLD-ASSIMQPKFVV 666
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 111/278 (39%), Gaps = 36/278 (12%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y +++ + S K + + +++ L + + D L +MK E ++ + F
Sbjct: 62 YFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLE-----GISCSEDLFIS 116
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ Y G + A++ F +M ++R P +N+++D L +Y M G
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ P+ +TY +L+ A + NRVD +M G P+ Y L+ L ++G + EA+
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236
Query: 250 ----SFF---------------------------DIMVKKLKMDDASYKFMMKALSDGGK 278
SF ++M K + + SY ++ ALSD G
Sbjct: 237 ELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGN 296
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
++ L ++ + G +KG K G E
Sbjct: 297 VELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHE 334
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 130/287 (45%), Gaps = 10/287 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + Y+ L+ G R G L +E+ + +V DG Y L G
Sbjct: 124 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ--KMVPDGFTYSILFDGLSRN 181
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + + + + + + V + + +L+ LC +GK A ++ + N P R+
Sbjct: 182 GDSKAMLSLFGKYL--KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 239
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N + +GYC G + A F +M PD +++N LI+ LCK + A++
Sbjct: 240 I-----YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 294
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM D GVNP T+ L+DA +++ +M ++GL+PN+ Y +V
Sbjct: 295 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 354
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDAS-YKFMMKALSDGGKLDEILEIV 286
+ G + EA + D M K + +A Y ++ A + G D+ +V
Sbjct: 355 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 401
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 145/358 (40%), Gaps = 42/358 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + V D YS L G R+GDS + LF G + +GV G +
Sbjct: 159 MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLF-------GKYLKNGVTIGDYTCSILLN 211
Query: 61 GMEEEAMECYNEAVGE---NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G+ ++ E V + N+ + + V N++++ C G+ + A F +MK+ H P
Sbjct: 212 GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKP 271
Query: 118 KRLAVN------------------------------LGSFNVMADGYCGQGRFKDAIEVF 147
+ N + +FN + D Y G+ + V
Sbjct: 272 DHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVL 331
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M E P+ +S+ ++++ CKNG + EA + +M K V P+ Y ++DA E
Sbjct: 332 SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEH 391
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASY 266
D KM +G+ P++ YN L+ L + EA+ + + +L D SY
Sbjct: 392 GPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSY 451
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ A G +D+ L++ + G + + G L GR E+ L +K
Sbjct: 452 NTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG-LGGAGRLNEMEYLYQK 508
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 137/307 (44%), Gaps = 41/307 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY------- 57
G V V+Y+ L+ G+ + G+ +G F F ++K + + D + Y +L+ G
Sbjct: 233 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR--HIKPDHITYNALINGLCKAERIT 290
Query: 58 ----FMKGMEE----EAMECYNEAVG------------------ENSSVKMSAVANNSVL 91
+ M++ +E +N + + + +K + V+ S++
Sbjct: 291 NAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIV 350
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+A C NGK EA+ + D M ++ P N +N + D Y G A + KM
Sbjct: 351 NAFCKNGKIPEAVAILDDMFHKDVLP-----NAQVYNAIIDAYVEHGPNDQAFILVEKMK 405
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
SP +++N LI LC ++EAEE+ +S+ + PD +Y L+ AC +D
Sbjct: 406 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 465
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMM 270
++M G++ + Y++L+ L G L+E + + M++ + +A + M+
Sbjct: 466 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMV 525
Query: 271 KALSDGG 277
+A S G
Sbjct: 526 EAYSKYG 532
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMG-EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N G +A+ + R+MG + P+ S+N +I + + G +A E++ E
Sbjct: 29 AWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDE 88
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+++ V P+ TY ++D + ++ G +MV GL+PN YN L+ L + G
Sbjct: 89 MTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGR 148
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+ E + D M +K+ D +Y + LS G +L + G L + G+ +
Sbjct: 149 MGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKN-GVTIGDYTCS 207
Query: 304 FVKGELSKEGR---EEEVVK 320
+ L K+G+ EEV++
Sbjct: 208 ILLNGLCKDGKVSIAEEVLQ 227
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF K + + VY+ ++ +V G +D F L E++K G+ V Y L+KG +
Sbjct: 369 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN--GISPSIVTYNLLIKGLCNQ 426
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA E N N + AV+ N+++ A C G D+AL L RM +
Sbjct: 427 SQISEAEEIINSL--SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHK-----YGI 479
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +++ + G G GR + +++KM + P N +++ K G +AE+
Sbjct: 480 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 539
Query: 181 LYGEMSDKGVNPDE 194
L EM K N D+
Sbjct: 540 LRKEMLQKRNNHDD 553
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 144/328 (43%), Gaps = 11/328 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF + V Y L+ G +D F +F E+ K G+ + V Y SL+ G
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITK--GISPNIVTYNSLIHGLCKL 198
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ NE V +S + N+V+DALC G EA + D M + P
Sbjct: 199 CEWKHVTTLMNEMV--DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP--- 253
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N + DG+C + A++VF M C + +S+N LI+ CK + +A
Sbjct: 254 --NVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 311
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EMS + + P+ TY L+ V R+ D + F +MV G P+L Y L L
Sbjct: 312 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 371
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ LD+A + I D Y ++ + G+L++ ++ L G++ +
Sbjct: 372 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN-LSSKGLQPNV 430
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKER 327
+ L K+G E KL + +
Sbjct: 431 WTYNIMIHGLCKQGLLAEASKLFSEMNK 458
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 122/252 (48%), Gaps = 8/252 (3%)
Query: 46 DGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK 105
D + +L++G ++G EA+ +++ +GE + + V ++++ LC + + EA
Sbjct: 114 DATTFTTLIRGLCVEGKIGEALHLFDKMIGE--GFQPNVVTYGTLINGLCKDRQVTEAFN 171
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
+F M K ++ N+ ++N + G C +K + +M + + PD + N +
Sbjct: 172 IFSEMIT-----KGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 226
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+D LCK GM+AEA ++ M +GV P+ TY LMD N VD F MV
Sbjct: 227 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 286
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILE 284
N+ YN L+ ++ +D+A F+ M ++ L + +Y ++ L G+L + +
Sbjct: 287 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 346
Query: 285 IVGGILDDGGIE 296
+ ++ G I
Sbjct: 347 LFHEMVARGQIP 358
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 136/288 (47%), Gaps = 13/288 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
GV + V Y +LM G+ ++ + A++ ++ V ++ + ++ N++++ C D
Sbjct: 250 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA--NVISYNTLINGYCKIQSVD 307
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A+ LF+ M + L N ++N + G C GR +DAI +F +M PD ++
Sbjct: 308 KAMYLFEEMSRQ-----ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVT 362
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ L D LCKN L +A L + +PD Y ++D ++D F +
Sbjct: 363 YRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLS 422
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
GL+PN+ YN ++ L + G+L EA F M K +D +Y + + +
Sbjct: 423 SKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL 482
Query: 281 EILEIVGGILDDGGIEFSEELQ--EFVKGELSKEGREEEVVKLMEKKE 326
+E++ +L G FS ++ + G LS +G ++ V +++ K
Sbjct: 483 RTIELLEEMLARG---FSVDVSTTTLLVGMLSDDGLDQSVKQILCKPS 527
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 130/282 (46%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D Y+ L+ + V L E+ ++ + VV+ +++ +
Sbjct: 664 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN--SKIMPNVVVFSTVVDALCKE 721
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM A + + + V+ V +++D C + DEA+K+FD M ++ P
Sbjct: 722 GMIAIAHDVVDMMIKR--GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP--- 776
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ S+N++ +GYC R A+ + +M DT+++N LI LC G L A
Sbjct: 777 --NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 834
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM G PD TY +L+D + + + + + + S L ++ VYN + +
Sbjct: 835 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 894
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ G L+ A+ F ++ K L+ D +Y M+ L G LDE
Sbjct: 895 RAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDE 936
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 7/211 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
GV D V Y +LM G+ ++ +EA++ ++ V + + + N +++ C + D
Sbjct: 738 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY--NILINGYCQIQRMD 795
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A+ L ++M + L + ++N + G C GR + AI +F +M PD ++
Sbjct: 796 KAMGLLEQMSLQ-----GLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 850
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ L+D LCKN LAEA L + ++ D Y + +D ++ F +
Sbjct: 851 YRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLS 910
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
GL+P++ YN ++ L + G+LDEA F
Sbjct: 911 SKGLQPDVRTYNIMIHGLCKRGLLDEANKLF 941
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
K ++ ++ ++N + C +K + +M + P+ + F+ ++D LCK GM+A
Sbjct: 667 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAI 726
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A ++ M +GV PD TY LMD + +D+ F MV G PN+ YN L+
Sbjct: 727 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 786
Query: 238 KLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
Q+ +D+A + M ++ L D +Y ++ L G+L + + ++ G I
Sbjct: 787 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 846
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 114/264 (43%), Gaps = 15/264 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ LM G + D ++F+ + K G V + Y L+ GY
Sbjct: 734 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK--GCVPNVRSYNILINGYCQI 791
Query: 61 GMEEEAMECYNEAVGENSSVK---MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
++AM + E S++ V N+++ LC+ G+ A+ LF M P
Sbjct: 792 QRMDKAM-----GLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 846
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+L ++ ++ D C +A+ + + + D L +N ID +C+ G L
Sbjct: 847 -----DLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 901
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A +L+ +S KG+ PD TY +++ + +D+ FRKM ++ + N
Sbjct: 902 ARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQKS 961
Query: 238 KLVQVGMLDEAKSFFDIMVKKLKM 261
+ Q ML E + I V KM
Sbjct: 962 LIYQKIMLPEIDLVYSISVMFEKM 985
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 149/353 (42%), Gaps = 58/353 (16%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK-GMEEEAME--C 69
Y+ + GF+R+ ++ R E L+E L S V +L+ G G+++ + C
Sbjct: 468 YNLITRGFLRNNEA---LRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILC 524
Query: 70 YNEAVGENSSVKMSAVA-------NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR--- 119
+ S +M ++ +NS+ + D+AL F+RM + H PP
Sbjct: 525 KPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDF 584
Query: 120 ------------------LAVNLGSF---------NVMADGYCGQGRFKDAIEVFRKMGE 152
L+ + SF N++ + +C R A V K+ +
Sbjct: 585 TKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLK 644
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
PD +++ L++ LCK M KG++PD +TY L+ A +
Sbjct: 645 LGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLCEWKH 691
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
T +MV+S + PN+ V++ +V L + GM+ A D+M+K+ ++ D +Y +M
Sbjct: 692 VTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMD 751
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++DE +++ ++ G + + G + R ++ + L+E+
Sbjct: 752 GHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ-RMDKAMGLLEQ 803
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 100 FDEALKLFDRMKNEHNPPKRLAVN---------------------LGSFNVMADGY---- 134
DEAL F+RM ++ PP + N + SF + D Y
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 135 -----CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
C R A K+ + PD +F LI LC G + EA L+ +M +G
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
P+ TYG L++ + +V + F +M+ G+ PN+ YN L+ L ++
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205
Query: 250 SFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ + MV M D + ++ AL G + E ++V ++ G
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 150/331 (45%), Gaps = 15/331 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+F G D Y+ L+LG+ R+ D + +++F + K G + V Y +++ G
Sbjct: 240 IFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNK--GCRRNEVSYTTIIHGLCEA 297
Query: 61 GMEEEAMECYNEAVGEN--SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G +E + + + ++ +V+ V ++ AL N + E + LF+ M+ P
Sbjct: 298 GRIDEGISLFKKMREDDCYPTVRTYTV----IIHALFGNDRNLEGMDLFNEMRERSCEP- 352
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N+ ++ VM D C + + ++ + +M E P +++N LI C+ G + A
Sbjct: 353 ----NVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAA 408
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E+ G M P+E TY L+ + V T KM++S L P+L YN L+
Sbjct: 409 LEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHV 468
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
+ G D A D++ + L D +Y + L +++E ++ L + GI+
Sbjct: 469 QCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNS-LKEKGIKA 527
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKERE 328
+E + + K G+ +E + L+E+ E
Sbjct: 528 NEVMYTALIDGHCKAGKIDEAISLLERMHSE 558
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 139/352 (39%), Gaps = 68/352 (19%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+P V++Y ++ ++ D R+ E+ EK G+V V Y +L++GY +G E
Sbjct: 350 CEPNVHTYTVMVDAMCKERKLDESRRILNEMMEK--GLVPSVVTYNALIRGYCEEGRIEA 407
Query: 66 AME---------C------YNEAVG------------------ENSSVKMSAVANNSVLD 92
A+E C YNE + S + S V NS++
Sbjct: 408 ALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIH 467
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPP------------------------------KRLAV 122
C G FD A KL D +K P K +
Sbjct: 468 VQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKA 527
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N + + DG+C G+ +AI + +M C P++ ++N+LI +CK G + E +
Sbjct: 528 NEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMV 587
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
MS GV P TY +L++ D F +MV G +P++ Y +
Sbjct: 588 ENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTS 647
Query: 243 GMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
G + EA+ M++ M D+ +Y ++ A G + ++ +LD G
Sbjct: 648 GNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAG 699
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 108/262 (41%), Gaps = 44/262 (16%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ + G D ++L + LKE G+V D Y + EEA + +
Sbjct: 460 VTYNSLIHVQCKAGHFDSAYKLLDLLKE--NGLVPDQWTYSVFIDTLCKSKRMEEACDLF 517
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
N + +K + V +++D C GK DEA+ L +RM +E P N ++N +
Sbjct: 518 NSL--KEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLP-----NSSTYNSL 570
Query: 131 ADGYCGQGR-----------------------------------FKDAIEVFRKMGEYRC 155
G C +G+ F A VF +M +
Sbjct: 571 IYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGH 630
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
PD ++ I C +G + EAE + M + GV PD TY LL+ A + D
Sbjct: 631 KPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFN 690
Query: 216 YFRKMVDSGLRPNLAVYNRLVG 237
++M+D+G P+ ++N L+
Sbjct: 691 VLKRMLDAGCDPSHPIWNNLIW 712
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
S+N L+ L + M+ E + +Y EM + + P+ YT +++A ++ + + Y K+
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
+GL P+ Y L+ + ++ A F++M K + ++ SY ++ L + G++
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300
Query: 280 DE 281
DE
Sbjct: 301 DE 302
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 139/312 (44%), Gaps = 35/312 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V G D V+Y+ ++ +D + +F ++K G++ V Y SL+ G
Sbjct: 222 MKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGT--GILPTVVTYTSLIHGLRNL 279
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA NE G N + VA + ++D +C G+ EA + M P
Sbjct: 280 GRWKEAFGLLNEMKGGN--IMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVA 337
Query: 121 AVN------------------------------LGSFNVMADGYCGQGRFKDAIEVFRKM 150
N + SF+++ +GYC R +A ++F +M
Sbjct: 338 TYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEM 397
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
PDT+S+N LI LC+ EAEEL+ +M G P+ TY +L+D + +
Sbjct: 398 THRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYL 457
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFM 269
D FR M +SGL+P+L YN ++ + + G +A+ F ++ VK L+ ++
Sbjct: 458 DQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPT 517
Query: 270 MKALSDGGKLDE 281
+ + GG LDE
Sbjct: 518 IDGVCKGGLLDE 529
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 125/261 (47%), Gaps = 15/261 (5%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+ D V +S L+ ++G+ + + + E GV D Y +LM GY ++ E
Sbjct: 297 IMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEM--GVEPDVATYNTLMNGYCLRMEVVE 354
Query: 66 AMECYNEAVGENSSVKMSAVANNSVL-DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + + + + +M V + S+L + C + DEA +LFD M + P +
Sbjct: 355 ARKVFEVMISKG---RMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTV---- 407
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S+N + G C R +A E+F+ M P+ ++++ L+D L K G L +A L+
Sbjct: 408 -SYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRA 466
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + G+ PD TY +++D + + D F ++ GL+PN V + + + G+
Sbjct: 467 MENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGL 526
Query: 245 LDEAKSFFDIMVKKLKMDDAS 265
LDEA F ++++ DD S
Sbjct: 527 LDEAHKAF----RQMEKDDCS 543
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 41/235 (17%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+ + +++++ C GK A++LFD M P N+ S++++ G C G+ +
Sbjct: 160 NVITFSTLINGFCIEGKIGRAIELFDVMVARGYKP-----NVHSYSIIIKGLCRVGKTTE 214
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY----- 197
I++ M C PD + +N ++D+LCK+ ++ EA ++ +M G+ P TY
Sbjct: 215 VIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIH 274
Query: 198 ------------------------------GLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
+L+D + V + + M + G+ P
Sbjct: 275 GLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEP 334
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDE 281
++A YN L+ + EA+ F++M+ K +M D S+ ++ ++DE
Sbjct: 335 DVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDE 389
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 9/216 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ LM G+ + ++FE + K G + D + L+ GY +
Sbjct: 331 GVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISK--GRMPDVFSFSILVNGYCKAKRID 388
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + ++E + + V+ N+++ LC + EA +LF M + PP NL
Sbjct: 389 EAKQLFDEMT--HRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPP-----NL 441
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++++ D QG A+ +FR M PD +++N +ID +CK G +A EL+ E
Sbjct: 442 VTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAE 501
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+S KG+ P+ + +D + +D+ FR+M
Sbjct: 502 LSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQM 537
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 10/187 (5%)
Query: 67 MECYNEAVGENSSVKMSAVANNSV-----LDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
M+ Y V + ++M+ ++++ + ++ C D + ++ P
Sbjct: 104 MKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEP---- 159
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N+ +F+ + +G+C +G+ AIE+F M P+ S++ +I LC+ G E +L
Sbjct: 160 -NVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKL 218
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M G PD Y ++D + V++ F KM +G+ P + Y L+ L
Sbjct: 219 LEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRN 278
Query: 242 VGMLDEA 248
+G EA
Sbjct: 279 LGRWKEA 285
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA+ F M P + F L L + L +M G++ D + +L+
Sbjct: 74 DALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILI 133
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LK 260
+ + VD G + K++ GL PN+ ++ L+ G + A FD+MV + K
Sbjct: 134 NCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYK 193
Query: 261 MDDASYKFMMKALSDGGKLDEILEIV 286
+ SY ++K L GK E+++++
Sbjct: 194 PNVHSYSIIIKGLCRVGKTTEVIKLL 219
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 91/225 (40%), Gaps = 9/225 (4%)
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
++AL F+ M N + P ++ F + +K + + ++M S D
Sbjct: 72 INDALSAFNHMVNTNPLP-----SIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDV 126
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFR 218
LS LI+ C+ + + G++ G+ P+ T+ L++ C E ++ F
Sbjct: 127 LSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIE-GKIGRAIELFD 185
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGG 277
MV G +PN+ Y+ ++ L +VG E + M V + D Y ++ L
Sbjct: 186 VMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDR 245
Query: 278 KLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
++E + I + G + + G L GR +E L+
Sbjct: 246 LVNEAVHIFCKMKGTGILPTVVTYTSLIHG-LRNLGRWKEAFGLL 289
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 9/225 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G D Y+ L+ GF + D LF+E+ +K +V D V Y SL+ G
Sbjct: 578 MSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQK--NMVPDTVTYSSLVDGLCKS 635
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + +E + + NS++D LC NG D+A+ LF++MK++ P
Sbjct: 636 GRISYVWDLIDEM--RDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRP--- 690
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +F ++ DG C GR KDA EVF+ + D +N +I CK G+L EA
Sbjct: 691 --NTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALT 748
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+ +M + G P+ T+ ++++A F+ + D R+M+ GL
Sbjct: 749 MLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 173/405 (42%), Gaps = 83/405 (20%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG------------------- 41
+ +GF + V Y+ L+ G + GD+ G +L ++ +L
Sbjct: 403 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQL 462
Query: 42 --------------GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGE--NSSVKMSAV 85
G+ +D V Y +L+ G+ + G +EA+ NE V + N V+ +
Sbjct: 463 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTI 522
Query: 86 ANNSVLDALCNNGKFDEA--------------------------LKLFDRMKNEH--NPP 117
++DAL GK EA L +++ K +H N
Sbjct: 523 ----LVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAM 578
Query: 118 KRLAV--NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
+ V ++ ++ ++ +G+C +A+ +F++M + PDT+++++L+D LCK+G +
Sbjct: 579 SLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRI 638
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+ +L EM D+G D TY L+D + +D F KM D G+RPN + L
Sbjct: 639 SYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTIL 698
Query: 236 VGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+ L + G L +A+ F D++ K +D Y M+ G L+E L ++ + ++G
Sbjct: 699 LDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGC 758
Query: 295 IEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
I + + L +K E +KAE R+ A
Sbjct: 759 IPNAVTFDIIINA-------------LFKKDENDKAEKLLRQMIA 790
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 9/251 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D Y+ LM G++ + +F + L GV D Y L+ G+ M +EA+
Sbjct: 550 PDVFTYNTLMNGYLLVYEVKKAQHVFNAMS--LMGVTPDVHTYTILINGFCKSKMVDEAL 607
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E +N + V +S++D LC +G+ L D M++ P ++ ++
Sbjct: 608 NLFKEMHQKN--MVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQP-----ADVITY 660
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + DG C G AI +F KM + P+T +F L+D LCK G L +A+E++ ++
Sbjct: 661 NSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLT 720
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
KG + D Y Y +++ + +++ T KM ++G PN ++ ++ L + D+
Sbjct: 721 KGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDK 780
Query: 248 AKSFFDIMVKK 258
A+ M+ +
Sbjct: 781 AEKLLRQMIAR 791
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V N+++ LC G+ EAL D++ + +N S+ + +G C G + A
Sbjct: 63 TVTLNTLIKGLCLKGQVKEALHFHDKLLAQ-----GFQLNQVSYATLINGVCRIGDTRAA 117
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
I+ RK+ P+ +N +ID LCK +++EA L+ EM+ KG++ + TY L+
Sbjct: 118 IKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYG 177
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
V ++ + MV + PN+ YN LV L + G + EAKS +M+K +K +
Sbjct: 178 FCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSN 237
Query: 263 DASYKFMM 270
+Y +M
Sbjct: 238 VITYSTLM 245
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 9/253 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G+ D V + L+ G G ++L + G + V Y +L+ G G
Sbjct: 57 RGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQ--GFQLNQVSYATLINGVCRIGDT 114
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A++ + G + K + N+++DALC EA LF M K ++ N
Sbjct: 115 RAAIKFLRKIDGRLA--KPNVEMYNTIIDALCKYQLVSEAYGLFSEMT-----VKGISAN 167
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +++ + G+C G+ K+A+ + M +P+ ++N L+D LCK G + EA+ +
Sbjct: 168 VVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLA 227
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M V + TY LMD F V V F M G+ P++ YN ++ ++
Sbjct: 228 VMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIK 287
Query: 244 MLDEAKSFFDIMV 256
+D+A + F M+
Sbjct: 288 RVDKALNLFKEMI 300
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 145/322 (45%), Gaps = 11/322 (3%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+KG D + L+ F G F + ++ ++ G V +L+KG +KG
Sbjct: 335 LKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKR--GYPPSTVTLNTLIKGLCLKGQ 392
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
++A+ +++ + + +++ V+ ++++ +C G A+KL ++ P
Sbjct: 393 VKKALHFHDKLLAQ--GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKP----- 445
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ ++ + D C +A +F +M S D ++++ LI C G L EA L
Sbjct: 446 NVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLL 505
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM K +NPD TY +L+DA + +V + + M+ + ++P++ YN L+ + V
Sbjct: 506 NEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLV 565
Query: 243 GMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+ +A+ F+ M + + D +Y ++ +DE L + + + +
Sbjct: 566 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTY 625
Query: 302 QEFVKGELSKEGREEEVVKLME 323
V G L K GR V L++
Sbjct: 626 SSLVDG-LCKSGRISYVWDLID 646
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 149/325 (45%), Gaps = 12/325 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ +GF + V Y+ L+ G R GD+ + ++ +L + +Y +++
Sbjct: 89 LLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAK--PNVEMYNTIIDALCKY 146
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ EA ++E + S + V ++++ C GK EAL L + M + P
Sbjct: 147 QLVSEAYGLFSEMTVKGISA--NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINP--- 201
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N++ D C +G+ K+A V M + + ++++ L+D + +A+
Sbjct: 202 --NVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQH 259
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ MS GV PD ++Y ++++ ++ RVD F++M+ S P + +N+++
Sbjct: 260 VFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQ-FNKILDSFA 318
Query: 241 QVGMLDEAKSF-FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
++ A S + +K ++ D + ++ G++ ++ IL G +
Sbjct: 319 KMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTV 378
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
L +KG L +G+ ++ + +K
Sbjct: 379 TLNTLIKG-LCLKGQVKKALHFHDK 402
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 110/277 (39%), Gaps = 48/277 (17%)
Query: 43 VVSDGVVYGSLMKGYFMKGMEEEAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKF 100
V S+ + Y +LM GYF+ ++A +N +G V + N +++ C +
Sbjct: 234 VKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH----SYNIMINGFCKIKRV 289
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
D+AL LF M PP + FN + D + + A+ + ++ PD
Sbjct: 290 DKALNLFKEMILSRFPP------IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLF 343
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-C--------------- 204
+ N LI+ C G + + ++ +G P T L+ C
Sbjct: 344 TLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKL 403
Query: 205 ----FEVNRVD--------------DGATYFRKMVDSGL-RPNLAVYNRLVGKLVQVGML 245
F++N+V GA + +D L +PN+ +Y+ ++ L + ++
Sbjct: 404 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV 463
Query: 246 DEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
EA F ++ VK + D +Y ++ GKL E
Sbjct: 464 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKE 500
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
++ V K+ + PDT++ N LI LC G + EA + ++ +G ++ +Y L++
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKM 261
+ + RK+ +PN+ +YN ++ L + ++ EA F ++ VK +
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166
Query: 262 DDASYKFMMKALSDGGKLDEIL 283
+ +Y ++ GKL E L
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEAL 188
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 135/282 (47%), Gaps = 12/282 (4%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+P +++Y +L G + + +FEE+ K G D + Y SL+ G G +E
Sbjct: 194 CEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRK--GYKPDIIAYSSLIDGLSKAGRVDE 251
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A + + V +AVA S++ LC G+ EA+K M+ +
Sbjct: 252 ARKLVDLMVARGPPP--TAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRL-----RPRVD 304
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+++ + GY G G+ + A V +M + C+PDT+S+ I+ L G EAE+++ M
Sbjct: 305 TYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETM 364
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+KG PD +TYG+++D + + R M + ++PN +Y ++ V+ L
Sbjct: 365 VEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRL 424
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+EA + ++K + +Y ++ AL K+DE LE++
Sbjct: 425 EEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELL 466
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 135/298 (45%), Gaps = 12/298 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG+ D + YS L+ G + G D +L + + + G V Y S++ G
Sbjct: 224 MIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVAR--GPPPTAVAYTSIVAGLCKC 281
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA++ E ++ + ++ GK ++A + + M + P +
Sbjct: 282 GRIQEAVKTIQEMRRRRLRPRVDTY--SFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTI 339
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
S+ + + GR ++A +VF M E C PD ++ +ID CK G +A A
Sbjct: 340 -----SYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATH 394
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M V P+ Y Y ++MD + +R+++ +++++ G+ P+ YN ++ L
Sbjct: 395 VLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALC 454
Query: 241 QVGMLDEAKSFFDIMVKK---LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
++ +DEA M ++ L+ +Y ++ L G + +++ ++D+G I
Sbjct: 455 KLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVI 512
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 159/367 (43%), Gaps = 46/367 (12%)
Query: 2 FVKGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
F + +++P V S+ L+ GF D + V L E+K + G+ S+G +G ++
Sbjct: 118 FFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKSR--GITSNGATHGVILSALCA 175
Query: 60 KGMEEEAMECYNEAVGENSS----------------------------------VKMSAV 85
+ ++A+ +N +V N K +
Sbjct: 176 RRDLDKAVSYFN-SVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDII 234
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
A +S++D L G+ DEA KL D M PP +A + + G C GR ++A++
Sbjct: 235 AYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVA-----YTSIVAGLCKCGRIQEAVK 289
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
++M R P +++ ++ G + +A + EM+D+ PD +Y + ++A +
Sbjct: 290 TIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALY 349
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDA 264
+ R ++ F MV+ G +P++ Y ++ + G + A +M K +K +
Sbjct: 350 SIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRY 409
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
Y +M +L+E LE+ IL D GI S V L K + +E ++L+ +
Sbjct: 410 IYTMIMDGFVKSSRLEEALELYQRILKD-GILPSTVTYNTVINALCKLKKMDEALELLRE 468
Query: 325 KEREKAE 331
+R K E
Sbjct: 469 MQRRKEE 475
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 134/296 (45%), Gaps = 12/296 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V Y+ ++ G + G + +E++ + D Y ++ GY
Sbjct: 259 MVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD--TYSFIVTGYIGM 316
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A E + + ++ ++AL + G+ +EA K+F+ M + P
Sbjct: 317 GKVEKAFAVMEEMADRDCAP--DTISYTMFIEALYSIGRREEAEKVFETMVEKGCKP--- 371
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ ++ D +C +G A V R M + P+ + ++D K+ L EA E
Sbjct: 372 --DMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALE 429
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG--LRPNLAVYNRLVGK 238
LY + G+ P TY +++A ++ ++D+ R+M L P++ Y+ ++
Sbjct: 430 LYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHG 489
Query: 239 LVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
L +VGM + A M+ + D +Y +++ L+ GK+ +E++ +L G
Sbjct: 490 LGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAG 545
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGD---SDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M KG D Y ++ F ++G + V RL ++ V + +Y +M G+
Sbjct: 364 MVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDK-----AAVKPNRYIYTMIMDGF 418
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
EEA+E Y + + + S V N+V++ALC K DEAL+L M+
Sbjct: 419 VKSSRLEEALELYQRILKDG--ILPSTVTYNTVINALCKLKKMDEALELLREMQRRK--- 473
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+ L ++ +++++ G G + A ++ +M + PD ++ +LI L G ++
Sbjct: 474 EELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSR 533
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
A EL EM G+ PD++TYG L+ + VD ++M+ +G PN
Sbjct: 534 AMELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPN 583
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 15/273 (5%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y+ + G + ++FE + EK G D YG ++ + +G A
Sbjct: 337 DTISYTMFIEALYSIGRREEAEKVFETMVEK--GCKPDMHTYGIIIDNFCKEGSMAAATH 394
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + ++VK + ++D + + +EAL+L+ R+ + P + ++N
Sbjct: 395 VLR--LMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTV-----TYN 447
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYR--CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+ + C + +A+E+ R+M + P ++++ +I L K GM A +L EM
Sbjct: 448 TVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMI 507
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
D GV PD +TY L+ +V +M+ +G+ P+ Y G LVQ+
Sbjct: 508 DNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTY----GTLVQILCRS 563
Query: 247 EAKSFFDIMVKKLKMDDASYKFMMKALSDGGKL 279
+ + +D++ + ++ +F KA+ G +L
Sbjct: 564 DVDAAWDLLQEMMRNGHTPNEFTFKAVEKGFRL 596
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
NS+L AL G +AL F +E N + SFN++ G+ + F+
Sbjct: 98 TRNSLLLALVRGGHLSDALGFFQSSISEPN--------VSSFNILLRGFAARDDFEVVNA 149
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+ R+M + + + ++ LC L +A + +S P +TY +L+D
Sbjct: 150 LLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLC 209
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA- 264
+ ++V+ F +M+ G +P++ Y+ L+ L + G +DEA+ D+MV + A
Sbjct: 210 KAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAV 269
Query: 265 SYKFMMKALSDGGKLDEILEIV 286
+Y ++ L G++ E ++ +
Sbjct: 270 AYTSIVAGLCKCGRIQEAVKTI 291
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 7/235 (2%)
Query: 95 CNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
C +A+KL D M+N+ + P ++ ++NV+ +G C +GR +AI+ M Y
Sbjct: 93 CKESGVGQAMKLLDEMRNKGSKP-----DVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 147
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C P+ ++ N ++ +C G +AE+L +M KG +P T+ +L++ +
Sbjct: 148 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 207
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
KM G PN YN L+ + +D A + DIMV + D +Y ++ AL
Sbjct: 208 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 267
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
GK+D +EI+ + G + G LSK G+ E +KL+++ R+
Sbjct: 268 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG-LSKVGKTERAIKLLDEMRRK 321
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 145/320 (45%), Gaps = 11/320 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V Y+ L+ G ++G D + + G + + + +++ G
Sbjct: 111 KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY--GCQPNVITHNIILRSMCSTGRW 168
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + ++ + + S S V N +++ LC G A+ + ++M P L
Sbjct: 169 MDAEKLLSDMLRKGCSP--SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL--- 223
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N + G+C + + AIE M C PD +++N L+ LCK+G + A E+
Sbjct: 224 --SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 281
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++S KG +P TY ++D +V + + +M GL+P++ Y+ LV L + G
Sbjct: 282 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 341
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+DEA FF D+ ++ + +Y +M L + D ++ + ++
Sbjct: 342 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 401
Query: 303 EFVKGELSKEGREEEVVKLM 322
++G ++ EG +E + L+
Sbjct: 402 ILIEG-IAYEGLAKEALDLL 420
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 9/263 (3%)
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+AM+ +E N K V N +++ +C G+ DEA+K + M + P N+
Sbjct: 100 QAMKLLDEM--RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQP-----NV 152
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ N++ C GR+ DA ++ M CSP ++FN LI+ LC+ G+L A ++ +
Sbjct: 153 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 212
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G P+ +Y L+ + ++D Y MV G P++ YN L+ L + G
Sbjct: 213 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 272
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+D A + + K +Y ++ LS GK + ++++ + G
Sbjct: 273 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 332
Query: 304 FVKGELSKEGREEEVVKLMEKKE 326
V G LS+EG+ +E +K E
Sbjct: 333 LVSG-LSREGKVDEAIKFFHDLE 354
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 9/190 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ +DG D + +L K G + Y +++ G
Sbjct: 248 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK--GCSPVLITYNTVIDGLSKV 305
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A++ +E +K + +S++ L GK DEA+K F ++ P
Sbjct: 306 GKTERAIKLLDEM--RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRP--- 360
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++N + G C + AI+ M RC P ++ LI+ + G+ EA +
Sbjct: 361 --NAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALD 418
Query: 181 LYGEMSDKGV 190
L E+ +G+
Sbjct: 419 LLNELCSRGL 428
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 136/284 (47%), Gaps = 6/284 (2%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
YS L+ F R G + F F + + G D + L+KG EAM+
Sbjct: 91 CTYSILIGRFCRMGHLEHGFAAFGLILKT--GWRMDHIAINQLLKGLCHGKRVGEAMDVL 148
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + E + V+ +L LCN + +EAL+L M ++H +R N+ S++++
Sbjct: 149 LQRMPELGCMP-DTVSYTILLKGLCNEKRAEEALELLHMMADDHG--RRCPPNVVSYSIV 205
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G+ +G+ +F +M + PD +++ +ID LCK + AE ++ +M D G
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ YTY L+ + + + +M GL+P+ Y L+ L + G EA+
Sbjct: 266 KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARF 325
Query: 251 FFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
FFD M++K +K ++Y ++ + G L E+ + ++++G
Sbjct: 326 FFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENG 369
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 132/279 (47%), Gaps = 9/279 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVV-YGSLMKGYFMKGME 63
G + D V Y+ L+ G + ++ L + + G VV Y ++ G+F +G
Sbjct: 156 GCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQV 215
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++ + E + + + V +V+D LC FD A +F +M + P N
Sbjct: 216 DKPYNLFLEMI--DRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKP-----N 268
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + GY G++K+ +++ +M PD ++ +L++ LCKNG EA +
Sbjct: 269 NYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFD 328
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M KG+ P TYG+L+ + + ++ MV++GL P+ ++N + G
Sbjct: 329 SMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCG 388
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
M+D+A F+ M + L + +Y ++ AL G++D+
Sbjct: 389 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDD 427
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 148/319 (46%), Gaps = 15/319 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + VV++ L+ G + L E+ ++ G+ + V + +L+
Sbjct: 435 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ--GICPNAVFFNTLICNLCNV 492
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E + + E+ V+ A + ++ C G+ DEA K+FD M + P +
Sbjct: 493 GRVMEGRRLID--LMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEV 550
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + GYC R DA +FR+M +P +++N ++ L + +EA+E
Sbjct: 551 -----TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 605
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY M + G D YTY ++++ + N VD+ F+ + GL+ N+ + ++G L+
Sbjct: 606 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 665
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G ++A F I L + +Y+ + + L + G L+E + + +G S+
Sbjct: 666 KGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 725
Query: 300 ELQEFV-----KGELSKEG 313
L V +G++S+ G
Sbjct: 726 MLNALVRRLLHRGDISRAG 744
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 138/324 (42%), Gaps = 35/324 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ ++ G + D +F+++ + G + Y L+ GY
Sbjct: 225 MIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDN--GFKPNNYTYNCLIHGYLSI 282
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR- 119
G +E ++ E +K S+L+ LC NG+ EA FD M + PK
Sbjct: 283 GKWKEVVQMLEEMSAR--GLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVS 340
Query: 120 -----------------------------LAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
L+ + FN+ Y G A+++F KM
Sbjct: 341 TYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM 400
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
++ SP+ +++ LID LCK G + +AE + +M ++GV P+ + L+ V++
Sbjct: 401 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 460
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+ +M+D G+ PN +N L+ L VG + E + D+M ++ D SY +
Sbjct: 461 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPL 520
Query: 270 MKALSDGGKLDEILEIVGGILDDG 293
+ G+ DE ++ G++ G
Sbjct: 521 ISGYCLTGRTDEAEKVFDGMVSIG 544
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 113/253 (44%), Gaps = 19/253 (7%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDG-----VVYGSLMKGYFM 59
G D Y+ L+ G+ G +D ++F+ G+VS G V Y +L+ GY
Sbjct: 509 GVRPDAFSYTPLISGYCLTGRTDEAEKVFD-------GMVSIGLSPTEVTYNTLLHGYCS 561
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
++A + E + V V N++L L +F EA +L+ M N
Sbjct: 562 ASRIDDAYCLFREML--RKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT---- 615
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ ++N++ +G C +A ++F+ + + ++F +I L K G +A
Sbjct: 616 -KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 674
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L+ + G+ P+ TY L+ + E +++ + F M +G PN + N LV +L
Sbjct: 675 DLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 734
Query: 240 VQVGMLDEAKSFF 252
+ G + A ++
Sbjct: 735 LHRGDISRAGAYL 747
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 98/263 (37%), Gaps = 76/263 (28%)
Query: 100 FDEALKLFDRMKNEHNPPK------------------------------------RLAVN 123
D+ALKLFD + + P ++A N
Sbjct: 30 LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPN 89
Query: 124 LGSFNVMADGYCGQGRFKDAIEVF------------------------------------ 147
L +++++ +C G + F
Sbjct: 90 LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD---KGVNPDEYTYGLLMDAC 204
++M E C PDT+S+ L+ LC EA EL M+D + P+ +Y ++++
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGF 209
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
F +VD F +M+D G+ P++ Y ++ L + + D A+ F M+ K ++
Sbjct: 210 FTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNN 269
Query: 264 ASYKFMMKALSDGGKLDEILEIV 286
+Y ++ GK E+++++
Sbjct: 270 YTYNCLIHGYLSIGKWKEVVQML 292
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 213 GATYFRKMV---DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
++F +MV + PNL Y+ L+G+ ++G L+ + F +++K +MD +
Sbjct: 71 AVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQ 130
Query: 269 MMKALSDGGKLDEILEIVGGILDD-GGIEFSEELQEFVKGELSKEGREEEVVKLME 323
++K L G ++ E ++++ + + G + + +KG L E R EE ++L+
Sbjct: 131 LLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKG-LCNEKRAEEALELLH 185
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 13/282 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y+ L G + D +F E++E VV + Y L+ GY G E+AM
Sbjct: 140 DRISYNMLTYGLCKADQIDRALAVFGEMEE--NAVVPSLLTYNGLLYGYCRAGRMEQAMT 197
Query: 69 CYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
E + + S V + N+V+ C + A + RM P N+ +
Sbjct: 198 LLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSP-----NVVT 252
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
FN + DG C G+ +A +F M E C P +++ LI + + +A + + +M
Sbjct: 253 FNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDML 312
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+GV P+ YTY L+ + N+V+D ++M +G PN+ Y R++G L + G ++
Sbjct: 313 RRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIE 372
Query: 247 EAKSFF-DIM---VKKLKMDDASYKFMMKALSDGGKLDEILE 284
A F D M K K D +Y ++ L K E E
Sbjct: 373 RATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYE 414
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+ L+AL G +A K+FD M + P N+ ++ ++ G C + A+E+
Sbjct: 41 NAYLNALVKGGHGSKARKIFDDMLYKECLP-----NIYTYGIVLRGLCDDAKTDAALELL 95
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ M +P T N L+ LCKNG + A ELY +SD+ + D +Y +L +
Sbjct: 96 QDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDE-CSLDRISYNMLTYGLCKA 154
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD 263
+++D F +M ++ + P+L YN L+ + G +++A + + M++ K D
Sbjct: 155 DQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSD 210
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
++N ++ L K G ++A +++ +M K P+ YTYG+++ + + D +
Sbjct: 38 FTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQD 97
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKL 279
M L P + N LV L + G +D A + + + +D SY + L ++
Sbjct: 98 MESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQI 157
Query: 280 DEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
D L + G + ++ + + G + GR E+ + L+E
Sbjct: 158 DRALAVFGEMEENAVVPSLLTYNGLLYG-YCRAGRMEQAMTLLE 200
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 12/276 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF KGF+ D YS L+ G DGD + +F E EK G ++Y +L+KG +
Sbjct: 348 MF-KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK--GFKHSIILYNTLVKGLSKQ 404
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G+ +A++ + + S + N V++ LC G +A + + + P
Sbjct: 405 GLVLQALQLMKDMMEHGCSPDIWTY--NLVVNGLCKMGCLSDANGILNDAIAKGCIP--- 459
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +FN + DGYC Q AIE+ M + +PD +++N L++ LCK L +
Sbjct: 460 --DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVD 517
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M +KG P+ TY +L+++ + +V + F++M GL P++ L+ L
Sbjct: 518 TFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLC 577
Query: 241 QVGMLDEAKSFFDIMVK--KLKMDDASYKFMMKALS 274
G LD+A F + K K A + M+ A
Sbjct: 578 SNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFC 613
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 8/227 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + Y+ L+ G + D V F+ + EK G + + Y L++ +
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK--GCTPNIITYNILIESFCKD 544
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EAME + E + + V +++ LC+NG+ D+A +LF ++ E+ +
Sbjct: 545 RKVSEAMELFKEM--KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY----KF 598
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ + FN+M + +C + A ++F KMG C+PD ++ +ID CK G + A
Sbjct: 599 SYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHT 658
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
E KG+ P T G +++ +R+ + MV +G+ P
Sbjct: 659 FLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 133/286 (46%), Gaps = 14/286 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
+ V Y ++ GF ++ + LF+E+ ++ G+ D + + L+ KG +E+ +
Sbjct: 180 NAVSYCAVISGFYKENCQIEAYHLFDEMLKQ--GICPDILTFNKLIHVLCKKGNVQESEK 237
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+++ + V + N + LC G DEA +L + + +E P ++ S+N
Sbjct: 238 LFSKVM--KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTP-----DVISYN 290
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ G+C + +A KM P+ ++N +I+ CK GM+ A+++ + K
Sbjct: 291 TLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFK 350
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G PDE+TY L++ ++ F + ++ G + ++ +YN LV L + G++ +A
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQA 410
Query: 249 KSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
D+M D +Y ++ L G L + GIL+D
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD----ANGILNDA 452
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 116/255 (45%), Gaps = 10/255 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + D ++ L+ G+ + + D + + + G+ D + Y +L+ G
Sbjct: 455 KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH--GITPDVITYNTLLNGLCKARKL 512
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ ++ + + + + + + N ++++ C + K EA++LF MK P +
Sbjct: 513 DNVVDTFKAMLEKGCTPNI--ITYNILIESFCKDRKVSEAMELFKEMKTRGLTP-----D 565
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ + + G C G A E+F + EY+ S T FN +I+ C ++ AE+L+
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLF 625
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M PD YTY +++D+ + +D T+ + + GL P+ +++ L
Sbjct: 626 HKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVT 685
Query: 243 GMLDEAKSFFDIMVK 257
L EA ++MV+
Sbjct: 686 HRLSEAVVIINLMVQ 700
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 141/341 (41%), Gaps = 69/341 (20%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
VY +M+ Y KG +EA+ + + + S + N++++ L G F +A K++
Sbjct: 78 VYIGIMRDYGRKGKVQEAVNVFERM--DFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYM 135
Query: 109 RMKNEHNPPK--RLAVNLGSFNVM---------------------ADGYCG--QGRFKD- 142
RMK+ P + + SF + A YC G +K+
Sbjct: 136 RMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKEN 195
Query: 143 ----AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
A +F +M + PD L+FN LI LCK G + E+E+L+ ++ +GV P+ +T+
Sbjct: 196 CQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255
Query: 199 LLMDACFEVNRVDDGA-----------------------------------TYFRKMVDS 223
+ + +D+ A Y KMV+S
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
G+ PN YN ++ + GM+ A K D M K D+ +Y ++ L + G ++
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Query: 283 LEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+ + ++ G VKG LSK+G + ++LM+
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKG-LSKQGLVLQALQLMK 415
>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 578
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 114/237 (48%), Gaps = 9/237 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D + Y+ LM G+ D LF + E+ G+V D Y L+KGY
Sbjct: 312 RGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIER--GLVPDVWSYNILIKGYCKFERV 369
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EAM + +N + + + NSV+D LC +G +A KL D M PP +
Sbjct: 370 GEAMNLLEDMFLKN--LVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPP----D 423
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ ++N++ + C + AI F+ + E +P+ S+N LI CKN L EA L+
Sbjct: 424 VTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLF 483
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
M K + PD TY +L+DA F ++D ++VD G+ PNL YN L+ L
Sbjct: 484 NHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGL 540
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 155/342 (45%), Gaps = 33/342 (9%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLF---------EELKEKLGGVVSDG---- 47
M V+G D YS L+ G R G V L +E +E ++ G
Sbjct: 223 MIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHD 282
Query: 48 -VVYGSLMKGYFMKGMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEAL 104
+ Y LM GY + EA + ++ V GE + ++ C K DEA
Sbjct: 283 IINYNILMNGYCLNNKVGEARKLFHMMVERGEQPD----TITYTILMHGYCLIDKVDEAR 338
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
LF M + L ++ S+N++ GYC R +A+ + M P+ +++N+
Sbjct: 339 NLFHGMIE-----RGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNS 393
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKG-VNPDEYTYGLLMDACFEVNRVDDGATYFRKMV-D 222
++D LCK+G + +A +L EM PD TY +L+++ + V+ +F+ ++ +
Sbjct: 394 VVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFE 453
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDE 281
PN+ YN L+ + LDEA + F+ M K L D +Y ++ AL +G +LD+
Sbjct: 454 RSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDK 513
Query: 282 ILEIVGGILDDGGIEFSEELQEF--VKGELSKEGREEEVVKL 321
+ ++ I+D G S L+ + + L K GR + K+
Sbjct: 514 AIALLVQIVDQG---ISPNLRTYNILINGLHKGGRPKTAQKI 552
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 137/286 (47%), Gaps = 20/286 (6%)
Query: 11 VVYSYLMLGF-VRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK--GMEEEAM 67
V ++ LM GF V D D ++ +++E+ + + D V+YG+L+ G G A+
Sbjct: 125 VTFTTLMKGFCVNDKMLDALY-IYDEMVAR--RIRFDDVLYGTLINGLCKSKIGKPRAAV 181
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + + E VK + + N+V+ LC +G +EA L +M + P + +
Sbjct: 182 QLL-QKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIY 240
Query: 128 NV-----------MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
+ + +G+C + +A E+F M E D +++N L++ C N +
Sbjct: 241 GLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVG 300
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EA +L+ M ++G PD TY +LM +++VD+ F M++ GL P++ YN L+
Sbjct: 301 EARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILI 360
Query: 237 GKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALS-DGGKLD 280
+ + EA + D+ +K L + +Y ++ L GG LD
Sbjct: 361 KGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILD 406
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 34/268 (12%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
++Y+ ++ G +DG+ + L K + G+ D Y SL+ G G +E
Sbjct: 198 IMYNTVVHGLCKDGNINEARVLCS--KMIVQGIFPDIFTYSSLIYGLCRAGQRKEV---- 251
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM--KNEHNPPKRLAVNLGSFN 128
S+L+ C N K DEA +LF+ M + E + ++ ++N
Sbjct: 252 -----------------TSLLNGFCLNNKVDEARELFNVMIERGEQH-------DIINYN 287
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
++ +GYC + +A ++F M E PDT+++ L+ C + EA L+ M ++
Sbjct: 288 ILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIER 347
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ PD ++Y +L+ + RV + M L PN+ YN +V L + G + +A
Sbjct: 348 GLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDA 407
Query: 249 KSFFDIM--VKKLKMDDASYKFMMKALS 274
D M + D +Y ++++L
Sbjct: 408 WKLVDEMHYCCQPPPDVTTYNILLESLC 435
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P ++L S + + C DA+ +F +M + P + F ++ + K A
Sbjct: 12 PYVRRIHLHSQPLPSQSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYA 71
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
A +LY M KGV P T+ +L++ + ++D + K++ G RPN+ + L+
Sbjct: 72 TAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLM 131
Query: 237 -GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALS 274
G V MLD + +++ ++++ DD Y ++ L
Sbjct: 132 KGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLC 170
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 114/296 (38%), Gaps = 63/296 (21%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V N +++ C+ G+ D A + ++ P N+ +F + G+C + DA
Sbjct: 89 TVTFNILINCFCHMGQMDFAFSVMGKILKWGCRP-----NVVTFTTLMKGFCVNDKMLDA 143
Query: 144 IEVFRKMGEYRCSPDTLSFNNLID------------------------------------ 167
+ ++ +M R D + + LI+
Sbjct: 144 LYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTV 203
Query: 168 --QLCKNGMLAEAEELYGEMSDKGVNPDEYTY-----------------GLLMDACFEVN 208
LCK+G + EA L +M +G+ PD +TY LL C N
Sbjct: 204 VHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLN-N 262
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYK 267
+VD+ F M++ G + ++ YN L+ + EA+ F +MV++ + D +Y
Sbjct: 263 KVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYT 322
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+M K+DE + G+++ G + +KG E R E + L+E
Sbjct: 323 ILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFE-RVGEAMNLLE 377
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 15/288 (5%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
P +Y+Y ++ G + D ++ EE+ + G D V Y S +KG +E
Sbjct: 111 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVR--GYFPDVVTYNSFIKGLCKCDRVDE 168
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A V V+ +V++ LC +G D A ++ D+M N P ++
Sbjct: 169 A-----RKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTP-----DVV 218
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+++ + DG+C G + A+ + M + C P+ +++N+L+ L + G + +AE++ EM
Sbjct: 219 TYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM 278
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+G PD +Y +D + RV F +MV+ G PN + Y+ LV +L + L
Sbjct: 279 ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKEL 338
Query: 246 DEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDD 292
D+A + + +K ++ D Y ++ L GG+ DE + +LD+
Sbjct: 339 DDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDE 386
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 162/364 (44%), Gaps = 44/364 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K D ++ L+ G R + +L +KE G V D +Y +L+ GY
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEM--GCVPDDAIYNALISGYSKA 58
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A + E V +N + + V +++D LC G+ +A+KL D M+++ P
Sbjct: 59 KDFGQAFKFLAEMV-KNHCLP-TVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSP--- 113
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKM-----------------GEYRC-------- 155
N+ ++NV+ +G C + + +A ++ +M G +C
Sbjct: 114 --NIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARK 171
Query: 156 -------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+PD +S+ +I+ LCK+G L A + +M+++G PD TY L+D +
Sbjct: 172 FLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGG 231
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
V+ M+ G RPN+ YN L+G L ++G + +A+ M ++ D SY
Sbjct: 232 EVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYN 291
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+ L ++ + + +++ G + V+ EL K+ ++ + L+E + R
Sbjct: 292 ACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVE-ELCKKKELDDAITLVE-QAR 349
Query: 328 EKAE 331
EK +
Sbjct: 350 EKYQ 353
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 120/286 (41%), Gaps = 38/286 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + YS L+ + + D L E+ +EK + D ++Y L+ G
Sbjct: 313 MVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQ--IVDILLYTVLLDGLCKG 370
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA +++ + E + N +LD+ C + D+AL++ +M +R
Sbjct: 371 GRFDEACALFSKVLDEKIC-EPDVFFYNVMLDSHCKRRQIDKALQIHKQML------ERN 423
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N++ G C R DA + M + PD +++ L+D +CK G A A E
Sbjct: 424 CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALE 483
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRV----------------------------DD 212
L+ E G PD TY L+ N D
Sbjct: 484 LFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSGDL 543
Query: 213 GATYFRKMVDSGLRPNLAVYNR-LVGKLVQVGMLDEAKSFFDIMVK 257
G F ++++S + PN + + + GKLV+ L +A+ FD VK
Sbjct: 544 GLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVK 589
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 112/276 (40%), Gaps = 40/276 (14%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEE-LKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+ D ++Y+ L+ G + G D LF + L EK+ D Y ++ + + ++
Sbjct: 354 IVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI--CEPDVFFYNVMLDSHCKRRQIDK 411
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A++ + + + N + V N ++ LC + + +A + M +E P +
Sbjct: 412 ALQIHKQMLERNCC---NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIP-----DFV 463
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE------ 179
++ + D C G+ A+E+F + + C PD ++++ LI L M EA
Sbjct: 464 TYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 523
Query: 180 ----------------------ELYGEMSDKGVNPDEYTYGL-LMDACFEVNRVDDGATY 216
+L+ E+ + V P+ T+G + + +
Sbjct: 524 DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGL 583
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
F + V G P+L V N L+ + G L+EA+ F
Sbjct: 584 FDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIF 619
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF+ D V Y L+ + G S LFEE + GG V D V Y +L+ G +
Sbjct: 453 MVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVK--GGCVPDVVTYSALITGLVHE 510
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKR 119
M EEA + K+ N+++ NG D LKLF + ++++ P R
Sbjct: 511 NMAEEAYLLFT---------KLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNAR 561
Query: 120 LAVNLGSFNVMADGYCGQGR--FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
S ++ G+ R F A+ K G + PD N LID K G L E
Sbjct: 562 TFGKEISGKLVKAESLGKARGLFDRAV----KGGFF---PDLFVANTLIDVFAKCGDLEE 614
Query: 178 AEELYGEM 185
A ++ M
Sbjct: 615 ARRIFYSM 622
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 136/276 (49%), Gaps = 10/276 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D V Y+ L+ + + ++ E++ L G V Y SL+ Y GM +
Sbjct: 309 GFSHDKVTYNALLDVYGKSHRPKEAMKVLNEME--LNGFSPSIVTYNSLISAYARDGMLD 366
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EAME N+ + + K ++L GK + A+ +F+ M+N P N+
Sbjct: 367 EAMELKNQMAEKGT--KPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKP-----NI 419
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN Y +G+F D +++F ++ SPD +++N L+ +NGM +E ++ E
Sbjct: 420 CTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G P+ T+ L+ A + T +R+M+D+G+ P+L+ YN ++ L + GM
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 245 LDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKL 279
++++ M + K ++ +Y ++ A ++G ++
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 12/279 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ R ++FEE+K G D V Y +L+ Y +
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA--AGFSHDKVTYNALLDVYGKSHRPK 331
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EAM+ NE E + S V NS++ A +G DEA++L ++M + P ++
Sbjct: 332 EAMKVLNEM--ELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP-----DV 384
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G+ G+ + A+ +F +M C P+ +FN I G + +++ E
Sbjct: 385 FTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDE 444
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGAT-YFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++ G++PD T+ L+ A F N +D + F++M +G P +N L+ + G
Sbjct: 445 INVCGLSPDIVTWNTLL-AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
++A + + M+ + D ++Y ++ AL+ GG ++
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI-EV 146
S++ A N+G++ EA+ +F +M+ E P L ++NV+ + + G + I +
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEEGCKP-----TLITYNVILNVFGKMGTPWNKITSL 266
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLA-EAEELYGEMSDKGVNPDEYTYGLLMDACF 205
KM +PD ++N LI CK G L EA +++ EM G + D+ TY L+D
Sbjct: 267 VEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYG 325
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDA 264
+ +R + +M +G P++ YN L+ + GMLDEA + M +K K D
Sbjct: 326 KSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 265 SYKFMMKALSDGGKLDEILEI 285
+Y ++ GK++ + I
Sbjct: 386 TYTTLLSGFERAGKVESAMNI 406
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 8/156 (5%)
Query: 98 GKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
GK +E L D MK P ++ ++N + + F + E+ R++ P
Sbjct: 646 GKANEVL---DYMKERGFTP-----SMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
D +S+N +I C+N + +A ++ EM D G+ PD TY + + + ++
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVV 757
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
R M+ G RPN YN +V ++ DEAK F +
Sbjct: 758 RYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVE 793
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 109/262 (41%), Gaps = 17/262 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF-- 58
M G D Y+ ++ R G + ++ E+++ G + + Y SL+ Y
Sbjct: 515 MLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED--GRCKPNELTYCSLLHAYANG 572
Query: 59 --MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+ M A E Y+ + + + + V S D L EA + F +K
Sbjct: 573 KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLL------PEAERAFSELKERGFS 626
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P ++ + N M Y + A EV M E +P ++N+L+ ++
Sbjct: 627 P-----DITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++EE+ E+ KG+ PD +Y ++ A R+ D + F +M DSG+ P++ YN +
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFI 741
Query: 237 GKLVQVGMLDEAKSFFDIMVKK 258
G M +EA M+K
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKH 763
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A + F K +Y+ D +I L K G ++ A L+ + + G + D Y+Y L+
Sbjct: 157 AFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLIS 216
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
A R + F+KM + G +P L YN ++ ++G
Sbjct: 217 AFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMG 257
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 6/118 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ KG D + Y+ ++ + R+ R+F E+++ G+V D + Y + + Y
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRD--SGIVPDVITYNTFIGSYAAD 747
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN--EHNP 116
M EEA+ + + NS++D C + DEA + ++N H P
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNTY--NSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 136/276 (49%), Gaps = 16/276 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y+ L+ G + G+ D + ++ EK GV+ D +Y LM G KG
Sbjct: 376 RGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEK--GVLPDANIYNVLMSGLCKKGRL 433
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A E + +N V A +++D +G F+EA KLF E K +
Sbjct: 434 PAAKVLLAEMLDQN--VAPDAFITATLVDGFIRHGDFEEAKKLF-----ELTIEKGIDPG 486
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +N M GYC G KDA+ F++M + SPD +++ +ID K L A ++G
Sbjct: 487 VVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFG 546
Query: 184 EMSDKGVNPDEYTYGLLMDA-CF--EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
M P+ TY LL++ C ++NR + F++M+ L+PN+ Y L+G
Sbjct: 547 LMVKGACKPNVVTYTLLINGFCLSGDINRAEKT---FKQMLSLRLKPNVVTYTILIGCFC 603
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSD 275
+ L +A SFF+ ++++K +D +Y ++M L++
Sbjct: 604 KGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTN 639
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 127/275 (46%), Gaps = 16/275 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + + V Y+ L+ G+ + GD++ LF+ELK K G + YG+++ G+ KG
Sbjct: 201 RGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMK--GFLPTVKTYGAIINGFCKKG-- 256
Query: 64 EEAMECYNEAVGENS--SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E ++ + E S + +S N+++DA +G EA M P
Sbjct: 257 --KFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDP---- 310
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ ++N++ G C G A ++ + + P+ +S+ LI CK G A +L
Sbjct: 311 -DMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDL 369
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+MS++G PD TY L+ VD T KMV+ G+ P+ +YN L+ L +
Sbjct: 370 LIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCK 429
Query: 242 VGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG 276
G L AK M+ + DA F+ L DG
Sbjct: 430 KGRLPAAKVLLAEMLDQNVAPDA---FITATLVDG 461
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 9/256 (3%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+KGF+ Y ++ GF + G + V +L E+ E+ G+ +Y +++ F G
Sbjct: 235 MKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSER--GLDVSIHIYNNIIDAQFKHGC 292
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA + + M+ N ++ C+ G+ +A +L ++ P ++
Sbjct: 293 RIEAADTVGWMIKSGCDPDMATY--NILITGSCSCGEVHKAEQLLEQAIKRGLLPNKV-- 348
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
S+ + YC QG + A+++ KM E PD +++ LI L G + A +
Sbjct: 349 ---SYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVR 405
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M +KGV PD Y +LM + R+ +M+D + P+ + LV ++
Sbjct: 406 NKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRH 465
Query: 243 GMLDEAKSFFDIMVKK 258
G +EAK F++ ++K
Sbjct: 466 GDFEEAKKLFELTIEK 481
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 13/252 (5%)
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G+ + A+E Y + + V + NS+L+ L +GK + A K++D M + +
Sbjct: 115 GLVDRALEFYRTFIKIHHCVP-DVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNG----- 168
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
V+ + +M G C +G+ +D ++ K C P+ + +N LID CK G A
Sbjct: 169 EVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANV 228
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ E+ KG P TYG +++ + + + +M + GL ++ +YN ++
Sbjct: 229 LFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQF 288
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG---KLDEILE--IVGGILDDGG 294
+ G EA M+K D A+Y ++ G K +++LE I G+L +
Sbjct: 289 KHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPN-K 347
Query: 295 IEFSEELQEFVK 306
+ ++ + + K
Sbjct: 348 VSYTPLIHNYCK 359
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 103/287 (35%), Gaps = 88/287 (30%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D + + L+ GF+R GD + +LFE EK G+ V Y +++KGY
Sbjct: 443 MLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEK--GIDPGVVGYNAMIKGYCKF 500
Query: 61 GMEEEAMECYNEAV-GENS--------------------------------SVKMSAVAN 87
GM ++A+ C+ + G +S + K + V
Sbjct: 501 GMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTY 560
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ C +G + A K F +M + RL N+ ++ ++ +C A F
Sbjct: 561 TLLINGFCLSGDINRAEKTFKQMLS-----LRLKPNVVTYTILIGCFCKGVNLTKACSFF 615
Query: 148 RKMGEYRCSPDTL----------------------------------------------- 160
+M +C P+ +
Sbjct: 616 EQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAA 675
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY-GLLMDACFE 206
S+N+++ LC++ M+ A L +M KG PD + LL C E
Sbjct: 676 SYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLE 722
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 130/287 (45%), Gaps = 10/287 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + Y+ L+ G R G L +E+ + +V DG Y L G
Sbjct: 261 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ--KMVPDGFTYSILFDGLSRN 318
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + + + + + + V + + +L+ LC +GK A ++ + N P R+
Sbjct: 319 GDSKAMLSLFGKYL--KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 376
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N + +GYC G + A F +M PD +++N LI+ LCK + A++
Sbjct: 377 I-----YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 431
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM D GVNP T+ L+DA +++ +M ++GL+PN+ Y +V
Sbjct: 432 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 491
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDAS-YKFMMKALSDGGKLDEILEIV 286
+ G + EA + D M K + +A Y ++ A + G D+ +V
Sbjct: 492 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 538
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 148/359 (41%), Gaps = 44/359 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLF--------------------------- 33
M + V D YS L G R+GDS + LF
Sbjct: 296 MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGK 355
Query: 34 ----EELKEKL--GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
EE+ + L G+V V+Y +L+ GY G E A + + ++ +K +
Sbjct: 356 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM--KSRHIKPDHITY 413
Query: 88 NSVLDALCNNGKFDEALKLFDRMK-NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N++++ LC + A L M+ N NP + +FN + D Y G+ + V
Sbjct: 414 NALINGLCKAERITNAQDLLMEMQDNGVNP------TVETFNTLIDAYGRTGQLEKCFIV 467
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
+M E P+ +S+ ++++ CKNG + EA + +M K V P+ Y ++DA E
Sbjct: 468 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 527
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDAS 265
D KM +G+ P++ YN L+ L + EA+ + + +L D S
Sbjct: 528 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 587
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
Y ++ A G +D+ L++ + G + + G L GR E+ L +K
Sbjct: 588 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG-LGGAGRLNEMEYLYQK 645
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 137/307 (44%), Gaps = 41/307 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY------- 57
G V V+Y+ L+ G+ + G+ +G F F ++K + + D + Y +L+ G
Sbjct: 370 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR--HIKPDHITYNALINGLCKAERIT 427
Query: 58 ----FMKGMEE----EAMECYNEAVG------------------ENSSVKMSAVANNSVL 91
+ M++ +E +N + + + +K + V+ S++
Sbjct: 428 NAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIV 487
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+A C NGK EA+ + D M + K + N +N + D Y G A + KM
Sbjct: 488 NAFCKNGKIPEAVAILDDMFH-----KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 542
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
SP +++N LI LC ++EAEE+ +S+ + PD +Y L+ AC +D
Sbjct: 543 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 602
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMM 270
++M G++ + Y++L+ L G L+E + + M++ + +A + M+
Sbjct: 603 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMV 662
Query: 271 KALSDGG 277
+A S G
Sbjct: 663 EAYSKYG 669
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMG-EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N G +A+ + R+MG + P+ S+N +I + + G +A E++ E
Sbjct: 166 AWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDE 225
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+++ V P+ TY ++D + ++ G +MV GL+PN YN L+ L + G
Sbjct: 226 MTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGR 285
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+ E + D M +K+ D +Y + LS G +L + G L + G+ +
Sbjct: 286 MGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKN-GVTIGDYTCS 344
Query: 304 FVKGELSKEGR---EEEVVK 320
+ L K+G+ EEV++
Sbjct: 345 ILLNGLCKDGKVSIAEEVLQ 364
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF K + + VY+ ++ +V G +D F L E++K G+ V Y L+KG +
Sbjct: 506 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN--GISPSIVTYNLLIKGLCNQ 563
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA E N N + AV+ N+++ A C G D+AL L RM +
Sbjct: 564 SQISEAEEIINSL--SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHK-----YGI 616
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +++ + G G GR + +++KM + P N +++ K G +AE+
Sbjct: 617 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 676
Query: 181 LYGEMSDKGVNPDE 194
L EM K N D+
Sbjct: 677 LRKEMLQKRNNHDD 690
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 141/324 (43%), Gaps = 35/324 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D V Y+ L+ G+ R G+ F LF+EL+ + V Y +L+ G +
Sbjct: 365 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY--LFPTIVTYNTLLDGLCRQ 422
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE------- 113
G E A + E + N + V +++ C G A + FD M +E
Sbjct: 423 GELEVAQQLKVEMI--NEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSY 480
Query: 114 -----------------------HNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
K +L +NV+ DG C G ++A E+ +KM
Sbjct: 481 AYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKM 540
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
PD +++ ++I +NG L + E++ EM KG+ P TY +L+ R+
Sbjct: 541 VSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRL 600
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+ YF +M + G+ PN+ YN L+ L +V +D+A +FF MV+K + + SY +
Sbjct: 601 ERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTIL 660
Query: 270 MKALSDGGKLDEILEIVGGILDDG 293
+ + G E L + +LD G
Sbjct: 661 INENCNMGNWQEALSLYKQMLDRG 684
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 157/326 (48%), Gaps = 32/326 (9%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-----VYGSLMKGYF 58
+G + V Y+ L+ G + G+ FE+ K +G ++ G+ Y L+ GYF
Sbjct: 263 RGCAPNDVTYNVLINGLSKKGE-------FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 315
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK-LFDRMKNEHNPP 117
KGM EA+ E V + +S ++ NS + LC G+ +A++ L D + N P
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATY--NSFIYGLCKLGRMSDAMQQLSDMLANNLLP- 372
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
++ S+N + GYC G A +F ++ P +++N L+D LC+ G L
Sbjct: 373 -----DVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEV 427
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY-NRLV 236
A++L EM ++G+ PD TY +L++ ++ + +F +M+ GL + Y R+V
Sbjct: 428 AQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIV 487
Query: 237 GKLVQVGMLDEAKSFF---DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
G+L ++G D +++F +++ K D Y ++ L G L+E E++ ++ DG
Sbjct: 488 GEL-KLG--DTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDG 544
Query: 294 GIEFSEELQEFVKGELS----KEGRE 315
I + L ++GRE
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGRE 570
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 124/239 (51%), Gaps = 9/239 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ ++G ++ GD+ F L EE+ K G D ++Y ++ G
Sbjct: 470 MLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAK--GFPPDLIIYNVVVDGLCKL 527
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA E + V + V V S++ A NG+ + ++F M + K L
Sbjct: 528 GNLEEASELLQKMVSDG--VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLS-----KGL 580
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ V+ G+ G+GR + A F +M E P+ +++N+LI+ LCK + +A
Sbjct: 581 TPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYN 640
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ EM +KG+ P++Y+Y +L++ + + + +++M+D G++P+ ++ L+ +L
Sbjct: 641 FFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 138/322 (42%), Gaps = 30/322 (9%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V Y+ L+ + + G L E++ + G + V Y L+ G KG E
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRR--GCAPNDVTYNVLINGLSKKGEFE 286
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E + + +K+SA N ++ N G EAL L + M + P +
Sbjct: 287 QAKGLIGEML--KTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASP-----TV 339
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N G C GR DA++ M PD +S+N LI C+ G L +A L+ E
Sbjct: 340 ATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 399
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ + P TY L+D ++ +M++ G+ P++ Y LV ++G
Sbjct: 400 LRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGS 459
Query: 245 LDEAKSFFDIM----------------VKKLKMDDASYKFMMK--ALSDGGKLDEILE-- 284
L A+ FFD M V +LK+ D S F ++ L+ G D I+
Sbjct: 460 LSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNV 519
Query: 285 IVGGILDDGGI-EFSEELQEFV 305
+V G+ G + E SE LQ+ V
Sbjct: 520 VVDGLCKLGNLEEASELLQKMV 541
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 7/194 (3%)
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
K + +A+E Y +GE +K + V N++LD+ C GK + L L M+ P
Sbjct: 212 KDLMSKAVEVY-RTMGE-FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAP-- 267
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N ++NV+ +G +G F+ A + +M + ++N LI GMLAEA
Sbjct: 268 ---NDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEAL 324
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L EM KG +P TY + ++ R+ D M+ + L P++ YN L+
Sbjct: 325 SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGY 384
Query: 240 VQVGMLDEAKSFFD 253
++G L +A FD
Sbjct: 385 CRLGNLMKAFLLFD 398
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 93/191 (48%), Gaps = 6/191 (3%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
++ L +FD+M RL+ ++ + N + + A+EV+R MGE+ P +
Sbjct: 181 EQCLSVFDKMIKS-----RLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N L+D CK G + + +L EM +G P++ TY +L++ + + +M
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
+ +GL+ + YN L+ GML EA S + MV K A+Y + L G++
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355
Query: 280 DEILEIVGGIL 290
+ ++ + +L
Sbjct: 356 SDAMQQLSDML 366
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 129/304 (42%), Gaps = 16/304 (5%)
Query: 21 VRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSV 80
+R+ S+ F + L + G V+ D ++ ++ + + A+ + A +
Sbjct: 57 IREKPSN--FSNYYWLSHQFGPVIVDPDLFVRVLSSF--RTSPRMALRLFRWAESQ-PGF 111
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRM--KNEHNPPKRLA-------VNLGSFNVMA 131
+ S ++L+ L N A + +R+ N H L V++ +++
Sbjct: 112 RRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLI 171
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
Y + + + VF KM + R SPD + N ++ L ++++A E+Y M + G+
Sbjct: 172 WVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIK 231
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P TY L+D+ + +V G +M G PN YN L+ L + G ++AK
Sbjct: 232 PTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGL 291
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELS 310
M+K LK+ +Y ++ + G L E L + ++ G F+ G L
Sbjct: 292 IGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG-LC 350
Query: 311 KEGR 314
K GR
Sbjct: 351 KLGR 354
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 133/283 (46%), Gaps = 16/283 (5%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY+ L+ GF+ + + + LFEE+K G D Y SL+ + G E + Y+
Sbjct: 792 VYNLLIDGFLEVHNVEVAWNLFEEMKS--AGCAPDTFTYNSLIDAHGKSGKINELFDLYD 849
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E + K + + N V+ L + + D+A+ L+ + + P +F +
Sbjct: 850 EML--TRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPC-----TFGPLI 902
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
DG GR DA E+F M Y C P++ +N L++ K G + A E + M +G+
Sbjct: 903 DGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIR 962
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
PD +Y +L+D RVDD YF K+ +GL P+L YN ++ L + +EA S
Sbjct: 963 PDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSL 1022
Query: 252 FDIMVKK-LKMDDASYKFMMKALS------DGGKLDEILEIVG 287
F M + + D +Y ++ L + GK+ E L+ +G
Sbjct: 1023 FHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIG 1065
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 151/359 (42%), Gaps = 52/359 (14%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V L+ G ++ G + FR+ E+ ++G + D + +M G + E+A+
Sbjct: 681 PDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNI-DRSFWEDVMGGILTEAGTEKAI 739
Query: 68 ----ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A+ ++ SV + ++ LC + K A +F + E L V
Sbjct: 740 LFGERLVCRAICKDDSVLIP------IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKV- 792
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+N++ DG+ + A +F +M C+PDT ++N+LID K+G + E +LY
Sbjct: 793 ---YNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYD 849
Query: 184 EMSDKGVNPDEYTY-----------------------------------GLLMDACFEVN 208
EM +G P+ TY G L+D +
Sbjct: 850 EMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSG 909
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
R+DD F MV G RPN A+YN LV ++G +D A FF MVK+ ++ D SY
Sbjct: 910 RLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYT 969
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
++ L G++D+ L L G++ + L + R EE + L + +
Sbjct: 970 ILVDILCIAGRVDDALHYFEK-LKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQ 1027
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 137/319 (42%), Gaps = 11/319 (3%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+P Y+Y++L + G FE++K + G+ + V + + G E
Sbjct: 435 VEPTAYTYILLIDYHGKSGHPGKALETFEKMKAR--GIAPNIVACNASLYSLAEMGRLGE 492
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A +NE ++S + +V N ++ G+ DEA+KL M P + +N
Sbjct: 493 AKAMFNEL--KSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVIN-- 548
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+ D GR ++A ++F +M E +P +++N L+ L K G + +A +L+ M
Sbjct: 549 ---SLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESM 605
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ G +P+ T+ L+D + + VD F KM RP++ +N ++ ++ +
Sbjct: 606 NGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQI 665
Query: 246 DEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
A F M K L+ D + ++ + G++++ I G E V
Sbjct: 666 KNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDV 725
Query: 306 KGELSKEGREEEVVKLMEK 324
G + E E+ + E+
Sbjct: 726 MGGILTEAGTEKAILFGER 744
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ L +GK DEA ++ RM ++ P ++ ++ V+ D C + DA+ +F KM
Sbjct: 271 IRVLGRDGKIDEAYRIMKRMDDDGCGP-----DVVTYTVLIDALCTARKLDDAMCLFTKM 325
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
PD +++ L+D+ G L + E+++ EM G PD T+ +L++A + R+
Sbjct: 326 KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRI 385
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM 270
++ M G+ PNL YN L+ L++ LD+A F M + L ++ +Y +++
Sbjct: 386 NEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNM-ESLGVEPTAYTYIL 444
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 150/352 (42%), Gaps = 48/352 (13%)
Query: 10 PVVYSYLMLGFV--RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P +Y+Y + V RDG D +R+ + + + G D V Y L+ ++AM
Sbjct: 262 PNIYTYTICIRVLGRDGKIDEAYRIMKRMDDD--GCGPDVVTYTVLIDALCTARKLDDAM 319
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + ++SS K V ++LD + G D+ K++ M+ + P ++ +F
Sbjct: 320 CLFTKM--KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAP-----DVVTF 372
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
++ + C GR +A ++ M + P+ ++N LI L + L +A +L+ M
Sbjct: 373 TILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMES 432
Query: 188 KGVNPDEYTYGLLMD----------------------------AC-------FEVNRVDD 212
GV P YTY LL+D AC E+ R+ +
Sbjct: 433 LGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGE 492
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMK 271
F ++ SGL P+ YN ++ +VG +DEA M K + + D ++
Sbjct: 493 AKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLID 552
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
L G+++E ++ +++ + + + L KEG+ ++ V+L E
Sbjct: 553 TLYKAGRVEEAWQMFCR-MEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFE 603
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 122/290 (42%), Gaps = 15/290 (5%)
Query: 49 VYGSLMKGYFMKG---MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK 105
Y + K F++G A+E EA ++A + N ++ L +G EAL+
Sbjct: 161 TYLIIFKSLFIRGGLRQAPSALEKMREA-----GFVLNAYSYNGLIHFLLQSGFCKEALE 215
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
++ RM +E P +L +F+ + + K + + +M P+ ++
Sbjct: 216 VYRRMVSEGLKP-----SLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTIC 270
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
I L ++G + EA + M D G PD TY +L+DA ++DD F KM S
Sbjct: 271 IRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSH 330
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILE 284
+P+ Y L+ K G LD+ + + M D ++ ++ AL G+++E +
Sbjct: 331 KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFD 390
Query: 285 IVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKA 334
++ + G + + G L + R ++ + L E E A
Sbjct: 391 LLDTMRKQGVLPNLHTYNTLISG-LLRANRLDDALDLFSNMESLGVEPTA 439
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y ++VGE +V + N +L+ L + + ++ +FD M+ + + N+ ++ +
Sbjct: 110 YFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQ-----IIRRNVDTYLI 164
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ +G + A KM E + S+N LI L ++G EA E+Y M +G
Sbjct: 165 IFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEG 224
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ P T+ LM A + + +M GLRPN+ Y + L + G +DEA
Sbjct: 225 LKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEA- 283
Query: 250 SFFDIMVKKLKMDD-------ASYKFMMKALSDGGKLDE 281
+ IM +MDD +Y ++ AL KLD+
Sbjct: 284 --YRIMK---RMDDDGCGPDVVTYTVLIDALCTARKLDD 317
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ L+ G D FE+LK+ G+ D V Y ++ G
Sbjct: 956 MVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQ--AGLDPDLVAYNLMINGLGRS 1013
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA+ ++E +N + NS++ L G +EA K+++ ++ P
Sbjct: 1014 QRTEEALSLFHEM--QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKP--- 1068
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
N+ ++N + GY G + A +++KM C P+T +F L +Q
Sbjct: 1069 --NVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPNQ 1114
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 150/321 (46%), Gaps = 12/321 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G ++ S ++LF+E+ L G+ D V Y +L++ G
Sbjct: 51 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA--LRGLALDTVCYTALIRELLQTGKIP 108
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A Y + V ++++D L G+ A+++F M+ + LA N
Sbjct: 109 QASSVYKTMTSHGCVPDV--VTLSTMIDGLSKAGRIGAAVRIFKSME-----ARGLAPNE 161
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G C + A+E+ +M + C+PDT+++N LID LCK+G + A + E
Sbjct: 162 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDE 221
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGA-TYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + G PD YTY +L+ + D + + ++ +G ++ Y +V L +
Sbjct: 222 MLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNK 281
Query: 244 MLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++EA + + I A+Y ++ L G+L+E ++++ I+D+G
Sbjct: 282 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 341
Query: 303 EFVKGELSKEGREEEVVKLME 323
+ G L KE R E KL +
Sbjct: 342 SLIDG-LGKEKRSFEAYKLFK 361
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 135/283 (47%), Gaps = 15/283 (5%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y+ L+ G + GD + F+E+ E G D Y L+ G+ G + A
Sbjct: 195 DTITYNVLIDGLCKSGDVEAARAFFDEMLE--AGCKPDVYTYNILISGFCKAGNTDAA-- 250
Query: 69 CYNEAVGENSSVKMSAV---ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
+ ++ + +++ + +++D L N K +EA+ L +++ P +
Sbjct: 251 --SHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP-----TIA 303
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + +G C GR ++AI++ RK+ + C+PD +++ +LID L K EA +L+ EM
Sbjct: 304 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 363
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ +G+ D Y L+ + ++ ++ ++ M G P++ + ++ L + G +
Sbjct: 364 ALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRI 423
Query: 246 DEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
A F M + L ++ Y ++ L K+D LE++
Sbjct: 424 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 466
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 9/251 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G ++ S ++LF+E+ L G+ D V Y +L++ G
Sbjct: 332 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA--LRGLALDTVCYTALIRELLQTGKIP 389
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A Y + V ++++D L G+ A+++F M+ + LA N
Sbjct: 390 QASSVYKTMTSHGCVPDV--VTLSTMIDGLSKAGRIGAAVRIFKSME-----ARGLAPNE 442
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G C + A+E+ +M + C+PDT+++N LID LCK+G + A + E
Sbjct: 443 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 502
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + G PD YTY +L+ + D F M S N+ Y L+ L +
Sbjct: 503 MLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQ 562
Query: 245 LDEAKSFFDIM 255
L +A +F M
Sbjct: 563 LTKASLYFQHM 573
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 123/292 (42%), Gaps = 10/292 (3%)
Query: 36 LKEKL--GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDA 93
L EK+ G Y +L+ G G EEA++ + V ++ V S++D
Sbjct: 8 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV--DNGCTPDVVTYTSLIDG 65
Query: 94 LCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
L + EA KLF M + LA++ + + G+ A V++ M +
Sbjct: 66 LGKEKRSFEAYKLFKEM-----ALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
C PD ++ + +ID L K G + A ++ M +G+ P+E Y L+ + ++D
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKA 272
+M + P+ YN L+ L + G ++ A++FFD M++ K D +Y ++
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240
Query: 273 LSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
G D + G + L+K + EE V LMEK
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEK 292
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
K +EA+ L +++ P + ++N + +G C GR ++AI++ RK+ + C+PD
Sbjct: 1 KIEEAVALMEKITANGCTP-----TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 55
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
+++ +LID L K EA +L+ EM+ +G+ D Y L+ + ++ ++ ++
Sbjct: 56 VVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYK 115
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGG 277
M G P++ + ++ L + G + A F M + L ++ Y ++ L
Sbjct: 116 TMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 175
Query: 278 KLDEILEIVG 287
K+D LE++
Sbjct: 176 KMDCALEMLA 185
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 9/224 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G D V Y+ L+ ++ G +++ + G V D V +++ G
Sbjct: 363 MALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH--GCVPDVVTLSTMIDGLSKA 420
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A+ + E + + V ++++ LC K D AL++ +MK P +
Sbjct: 421 GRIGAAVRIFKSM--EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 478
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N++ DG C G + A F +M E C PD ++N LI CK G A
Sbjct: 479 -----TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 533
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
++ +MS + + TYG L+ + ++ + YF+ M + G
Sbjct: 534 VFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 18/286 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V + V YS ++ + S L + + ++ G D V Y +++ G+F +G
Sbjct: 223 GCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETG 282
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A ++E + VK V N ++DALC D+A + +M + P +
Sbjct: 283 KACSLFHEMTRQG--VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTV---- 336
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ M GY GR K+A ++FR+M + P+ ++ N+ + LCK+G EA E +
Sbjct: 337 -TYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDS 395
Query: 185 MSDKGVNPDEYTYGLLM-----DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
M+ KG PD ++Y L+ + CF D F M +G+ N V+ L+
Sbjct: 396 MTAKGHKPDIFSYCTLLHGYASEGCFA-----DMIGLFNSMKSNGIAANCHVFTILIHAY 450
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILE 284
+ GM+D+A F M ++ + D +Y ++ S G+L + +E
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAME 496
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 20/256 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V YS ++ F R G F ++ + G+ + VY S+++G+ M G
Sbjct: 469 QGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVAR--GIQPNTAVYSSIIQGFCMHGGL 526
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A E +E + + + V +SV+++LC +G+ +A +FD LA +
Sbjct: 527 VKAKELVSEMINKGIP-RPDIVFFSSVINSLCKDGRVMDAHDIFD-----------LATD 574
Query: 124 LG------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+G +FN + DGYC G+ A ++ M PD +++N L+D KNG + +
Sbjct: 575 IGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRIND 634
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
L+ EM KGV P+ TYG+++ F R F +M++SG +++Y ++G
Sbjct: 635 GLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILG 694
Query: 238 KLVQVGMLDEAKSFFD 253
L + DEA F
Sbjct: 695 GLCRNNCADEAIILFQ 710
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 121/283 (42%), Gaps = 40/283 (14%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEK----------------------------- 39
D V YS ++ GF +G++ LF E+ +
Sbjct: 264 DVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVL 323
Query: 40 ----LGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALC 95
G D V Y ++ GY G +EA + + E + + + V NS L +LC
Sbjct: 324 RQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREM--KKRGLIPNIVTCNSFLASLC 381
Query: 96 NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
+G+ EA + FD M + + P ++ S+ + GY +G F D I +F M
Sbjct: 382 KHGRSKEAAEFFDSMTAKGHKP-----DIFSYCTLLHGYASEGCFADMIGLFNSMKSNGI 436
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+ + F LI K GM+ +A ++ EM +GV+PD TY ++ + R+ D
Sbjct: 437 AANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAME 496
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
F +MV G++PN AVY+ ++ G L +AK M+ K
Sbjct: 497 KFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINK 539
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 128/290 (44%), Gaps = 9/290 (3%)
Query: 7 VADPV--VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
VA P Y+ LM R D LF + G+ D + +L+K E
Sbjct: 152 VAVPTFCTYNILMDCCCRARRPDLGLALFGCILRT--GLKMDQITANTLLKCLCYANRTE 209
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ + E V +AV+ + VL ALC+N AL L M + + ++
Sbjct: 210 EAVNVLLHRMSELGCVP-NAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGA---CSPDV 265
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + G+ +G A +F +M PD +++N +ID LCK + +AE + +
Sbjct: 266 VAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ G PD TY ++ + R+ + A FR+M GL PN+ N + L + G
Sbjct: 326 MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGR 385
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
EA FFD M K K D SY ++ + G +++ + + +G
Sbjct: 386 SKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNG 435
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 141/320 (44%), Gaps = 42/320 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V YS ++ G+ G ++F E+K++ G++ + V S +
Sbjct: 326 MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKR--GLIPNIVTCNSFLASLCKH 383
Query: 61 GMEEEAME----------------------------CYNEAVGENSSVKMSAVANNS--- 89
G +EA E C+ + +G +S+K + +A N
Sbjct: 384 GRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVF 443
Query: 90 --VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
++ A G D+A+ +F M+ + P ++ +++ + + GR DA+E F
Sbjct: 444 TILIHAYAKRGMVDDAMLIFTEMQQQGVSP-----DVVTYSTVISTFSRMGRLTDAMEKF 498
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV-NPDEYTYGLLMDACFE 206
+M P+T ++++I C +G L +A+EL EM +KG+ PD + ++++ +
Sbjct: 499 NQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCK 558
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDAS 265
RV D F D G RP + +N L+ VG +D+A D M V ++ D +
Sbjct: 559 DGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVT 618
Query: 266 YKFMMKALSDGGKLDEILEI 285
Y ++ G++++ L +
Sbjct: 619 YNTLLDGYFKNGRINDGLTL 638
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 129/277 (46%), Gaps = 10/277 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ ++ L+ G+ G D F++ + ++ + GV D V Y +L+ GYF G + + +
Sbjct: 582 ITFNSLIDGYCLVGKMDKAFKILDAME--VVGVEPDIVTYNTLLDGYFKNGRINDGLTLF 639
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E + VK + V +L L G+ A K F M V + + ++
Sbjct: 640 REM--QRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGT-----TVTVSIYGII 692
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C +AI +F+K+G N +I+ + K EA+EL+ +S G+
Sbjct: 693 LGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGL 752
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+E TYG+++ + V+D F M SG+ P + NR++ L++ G + +A +
Sbjct: 753 LPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGN 812
Query: 251 FFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+ + K++ ++ ++ M+ S GK E ++++
Sbjct: 813 YLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 32/174 (18%)
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P TY +LMD C R D G F ++ +GL+ + N L+ L +EA
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEA--- 211
Query: 252 FDIMVKKLK-----MDDASYKFMMKALSDGGKLDEILEIVGGILDDGG------IEFSEE 300
++++ ++ + SY ++KAL D L+++ + GG + +S
Sbjct: 212 VNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTV 271
Query: 301 LQEFVK-----------GELSKEGREEEVVK-------LMEKKEREKAEAKARE 336
+ F E++++G + +VV L + + +KAE R+
Sbjct: 272 IHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 149/326 (45%), Gaps = 47/326 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VA+ Y+ L+ G ++G F ++E+++E GV + Y +M G +
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEH--GVFPNLYTYNCVMNQLCKDGRTK 285
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + ++E V + V N+++ LC K +EA K+ D+MK+ P NL
Sbjct: 286 DAFKVFDEM--RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINP-----NL 338
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG+C G+ A+ + R + SP +++N L+ C+ G + A ++ E
Sbjct: 339 ITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKE 398
Query: 185 MSDKGVNPDEYTYGLLMDACF-----------------EVNRVDDGATY----------- 216
M ++G+ P + TY +L+D F E+ V D TY
Sbjct: 399 MEERGIKPSKVTYTILIDT-FARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 217 --------FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYK 267
F+ MV+ L PN +YN ++ + G A F D+ K+L + ASY
Sbjct: 458 QMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYS 517
Query: 268 FMMKALSDGGKLDEILEIVGGILDDG 293
++++ L KL E ++V ++D G
Sbjct: 518 YLIRVLCKERKLKEAEDLVEKMIDSG 543
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V Y+ L+ GF R GD+ G ++ +E++E+ G+ V Y L+ +
Sbjct: 367 RGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEER--GIKPSKVTYTILIDTFARSDNM 424
Query: 64 EEAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E A++ + E +G V +V ++ C G+ +EA +LF M + P +
Sbjct: 425 ETAIQLRSSMEELGLVPDVHTYSV----LIHGFCIKGQMNEASRLFKSMVEKMLEPNEVI 480
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+N M GYC +G A+ +FR M E +P+ S++ LI LCK L EAE+L
Sbjct: 481 -----YNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDL 535
Query: 182 YGEMSDKGVNPDEYTYGLLMDA 203
+M D G++P + L+ A
Sbjct: 536 VEKMIDSGIDPSDTICNLISRA 557
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 87/168 (51%), Gaps = 6/168 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N++L + + F++ F+ K ++ +++ SF ++ G C G + + ++
Sbjct: 133 NNLLTFVVGSSSFNQWWCFFNESK------IKVVLDVYSFGIVIKGCCEAGEIEKSFDLL 186
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
++ E+ SP+ + + LID CK G + +A++L+ EM G+ +E+TY +L+ F+
Sbjct: 187 VELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKN 246
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
G + KM + G+ PNL YN ++ +L + G +A FD M
Sbjct: 247 GIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEM 294
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 109/235 (46%), Gaps = 11/235 (4%)
Query: 3 VKGFVADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+K +V +P + Y+ L+ GF G L +LK + G+ V Y L+ G+ K
Sbjct: 329 MKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSR--GLSPSLVTYNVLVSGFCRK 386
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A + E E +K S V ++D + + A++L M+ P
Sbjct: 387 GDTSGAAKMVKEM--EERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVP--- 441
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++V+ G+C +G+ +A +F+ M E P+ + +N +I CK G A
Sbjct: 442 --DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALR 499
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
L+ +M +K + P+ +Y L+ + ++ + KM+DSG+ P+ + N +
Sbjct: 500 LFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 120/275 (43%), Gaps = 11/275 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
+Y ++ +V+ D F E+ +K G V + +L+ + +N
Sbjct: 96 LYEVIINAYVQSQSLDSSIYYFNEMVDK--GFVPGSNCFNNLLTFVVGSSSFNQWWCFFN 153
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E+ V + + V+ C G+ +++ L ++ P N+ + +
Sbjct: 154 ES---KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSP-----NVVIYTTLI 205
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
DG C +G + A ++F +MG++ + ++ LI L KNG+ + E+Y +M + GV
Sbjct: 206 DGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVF 265
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P+ YTY +M+ + R D F +M + G+ N+ YN L+G L + +EA
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKV 325
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
D M + + +Y ++ GKL + L +
Sbjct: 326 MDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSL 360
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 46/90 (51%)
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
Y ++++A + +D YF +MVD G P +N L+ +V ++ FF+
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIV 286
K+ +D S+ ++K + G++++ +++
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLL 186
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + + V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A +LFD M + P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMID--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 79/189 (41%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + + F + LRP++ +N L+ +++G LD
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E + M ++ D +Y ++ L K+D+ E+ ++D+G + +
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLI 248
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 249 DGH-CKNGR 256
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 135/293 (46%), Gaps = 10/293 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V +P YS LM GF + G F+++E +K G+V + Y L+ Y GM +
Sbjct: 223 GLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKR--SGIVPNAYAYNCLISEYCNGGMVD 280
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + + E + + N ++ LC KF EA+KL ++ P N+
Sbjct: 281 KAFKVFAEM--REKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP-----NI 333
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ +G+C G+ A+ +F ++ SP +++N LI K LA A +L E
Sbjct: 334 VTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKE 393
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++ + P + TY +L+DA +N + M SGL P++ Y+ L+ L G
Sbjct: 394 MEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGN 453
Query: 245 LDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+ EA F + + L+ + Y M+ G L ++ ++ G +
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVP 506
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 117/239 (48%), Gaps = 9/239 (3%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
+Y +++ Y ++A+ + + E V +S NN ++ L + FD+A +F+
Sbjct: 91 LYDTIVNAYVHSHSTDQALTFLHHMIHE-GHVPLSNTFNN-LMCLLIRSNYFDKAWWIFN 148
Query: 109 RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
+K+ ++ ++ SF +M G C G F + + E+ SP+ + + LID
Sbjct: 149 ELKS------KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDG 202
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
CK G + A+ L+ +M G+ P+ +TY +LM+ F+ +G + M SG+ PN
Sbjct: 203 CCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPN 262
Query: 229 LAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
YN L+ + GM+D+A K F ++ K + +Y ++ L G K E +++V
Sbjct: 263 AYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV 321
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKG---- 56
M +G V ++ LM +R D + +F ELK K VV D +G ++KG
Sbjct: 115 MIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKSK---VVLDAYSFGIMIKGCCEA 171
Query: 57 -YFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF---DRMKN 112
YF+KG AM E G + +V V +++D C G A LF DR+
Sbjct: 172 GYFVKGFRLLAML---EEFGLSPNV----VIYTTLIDGCCKYGNVMLAKNLFCKMDRLGL 224
Query: 113 EHNPP-------------------------KR--LAVNLGSFNVMADGYCGQGRFKDAIE 145
NP KR + N ++N + YC G A +
Sbjct: 225 VPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFK 284
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
VF +M E + +++N LI LC+ EA +L +++ G++P+ TY +L++
Sbjct: 285 VFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFC 344
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV----GMLDEAK 249
+V ++D F ++ SGL P L YN L+ +V G LD K
Sbjct: 345 DVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVK 392
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 109/235 (46%), Gaps = 10/235 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ L+ GF G D RLF +LK G+ V Y +L+ GY
Sbjct: 328 GLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKS--SGLSPTLVTYNTLIAGYSKVENLA 385
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ E E + S V ++DA ++A ++ M+ L ++
Sbjct: 386 GALDLVKEM--EERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKS-----GLVPDV 438
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++V+ G C G K+A ++F+ +GE P+++ +N +I CK G A L E
Sbjct: 439 YTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNE 498
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
M G+ P+ ++ + + + +M++SGL+P++++Y ++V K+
Sbjct: 499 MVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY-KMVHKV 552
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 151/325 (46%), Gaps = 11/325 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D + +S ++ F R+G+ FE++K G+V D V+Y L+ GY
Sbjct: 355 MLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV--GLVPDTVIYTILINGYCRN 412
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
A++ NE V E V M V N++L+ LC D+A +LF M P
Sbjct: 413 DDVSGALKMRNEMV-ERGCV-MDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFP--- 467
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ + + GYC G A+ +F M PD +++N L+D CK G + +A+E
Sbjct: 468 --DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKE 525
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ +M + + P ++ +L++ + V + + +M + G++P L N ++ +
Sbjct: 526 LWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYL 585
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G L +A F + M+ + + D +Y ++ + D ++ +++ G+ +
Sbjct: 586 RAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINN-MEERGLLPNL 644
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+ G S+ GR +E ++ K
Sbjct: 645 VTYNAILGGFSRHGRMQEAEMVLHK 669
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 138/327 (42%), Gaps = 45/327 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V D V+Y+ L+ G+ R+ D G ++ E+ E+ G V D V Y +L+ G M +
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVER--GCVMDVVTYNTLLNGLCRGKMLD 451
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E + E V + +++ C +G +AL LF+ M P ++
Sbjct: 452 DADELFKEMVERGVFPDFYTLT--TLIHGYCKDGNMTKALSLFETMTLRSLKP-----DV 504
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG+C G + A E++ M P +SF+ LI+ C G+++EA L+ E
Sbjct: 505 VTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDE 564
Query: 185 MSDKG-----------------------------------VNPDEYTYGLLMDACFEVNR 209
M +KG V PD TY L+++ +
Sbjct: 565 MKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEEN 624
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
D M + GL PNL YN ++G + G + EA+ M+ K + D ++Y
Sbjct: 625 FDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTS 684
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGI 295
++ + E + +L G +
Sbjct: 685 LINGYVSKDNMKEAFRVHDEMLQRGFV 711
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 133/280 (47%), Gaps = 12/280 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGM 62
KG Y+ L+ G ++G + R+ +E+ LG G+ + + ++ K
Sbjct: 288 KGLKPGLFTYNALINGLCKEGSYERAKRVLDEM---LGVGLCPNAATFNPMLVESCRKED 344
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA +NE + V ++ +S++ NG+ AL F++MK P +
Sbjct: 345 VWEAERVFNEML--QRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVI- 401
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ ++ +GYC A+++ +M E C D +++N L++ LC+ ML +A+EL+
Sbjct: 402 ----YTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELF 457
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM ++GV PD YT L+ + + + F M L+P++ YN L+ +V
Sbjct: 458 KEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKV 517
Query: 243 GMLDEAKS-FFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
G +++AK ++D++ +++ S+ ++ G + E
Sbjct: 518 GEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSE 557
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 44/263 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D + L+ G+ +DG+ LFE + L + D V Y +LM G+
Sbjct: 460 MVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMT--LRSLKPDVVTYNTLMDGFCKV 517
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A E + + + + S ++ + +++ C+ G EA +L+D MK + P
Sbjct: 518 GEMEKAKELWYDMISR--EIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKP--- 572
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCK--------- 171
L + N + GY G A + M PD +++N LI+ K
Sbjct: 573 --TLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFF 630
Query: 172 --------------------------NGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+G + EAE + +M DKG+NPD+ TY L++
Sbjct: 631 LINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYV 690
Query: 206 EVNRVDDGATYFRKMVDSGLRPN 228
+ + + +M+ G P+
Sbjct: 691 SKDNMKEAFRVHDEMLQRGFVPD 713
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ +S L+ GF G FRL++E+KEK G+ V +++KGY G +A +
Sbjct: 540 ISFSILINGFCSLGLVSEAFRLWDEMKEK--GIKPTLVTCNTIIKGYLRAGNLSKANDFL 597
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
N + E V + N+++++ FD A L + M+ + L NL ++N +
Sbjct: 598 NTMISE--GVPPDCITYNTLINSFVKEENFDRAFFLINNMEE-----RGLLPNLVTYNAI 650
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G+ GR ++A V KM + +PD ++ +LI+ + EA ++ EM +G
Sbjct: 651 LGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGF 710
Query: 191 NPDE 194
PD+
Sbjct: 711 VPDD 714
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 19/201 (9%)
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A + Y + V + V + + N +++ALC +GK D M+ K +
Sbjct: 203 GWVDLAWKVYEDFVKSGNIVNVYTL--NIMVNALCKDGKLDNVGVYLSEMEE-----KGV 255
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L ++N + + YC +G +A + M P ++N LI+ LCK G A+
Sbjct: 256 YADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKR 315
Query: 181 LYGEMSDKGVNPDEYTYG-LLMDAC-----FEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+ EM G+ P+ T+ +L+++C +E RV F +M+ G+ P+L ++
Sbjct: 316 VLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERV------FNEMLQRGVVPDLISFSS 369
Query: 235 LVGKLVQVGMLDEAKSFFDIM 255
+VG + G L A ++F+ M
Sbjct: 370 IVGVFSRNGELGRALAYFEKM 390
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 109/237 (45%), Gaps = 8/237 (3%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
VV+ L++ Y E E + V ++A N++L A+ G D A K++
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINAC--NALLGAIVKVGWVDLAWKVY 212
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
+ N VN+ + N+M + C G+ + +M E D +++N L++
Sbjct: 213 EDFVKSGN-----IVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVN 267
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
C+ G+++EA L M+ KG+ P +TY L++ + + +M+ GL P
Sbjct: 268 AYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCP 327
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
N A +N ++ + + + EA+ F+ M+++ + D S+ ++ S G+L L
Sbjct: 328 NAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRAL 384
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 141/290 (48%), Gaps = 10/290 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D V ++ L+ G+ + G+ D V +L EE++ G +D V Y +L+ + G E
Sbjct: 218 GCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRR--SGCKADVVTYNALINCFCKFGRME 275
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + A + V + V ++ +DA C G EA+KLF +M+ + +A+N
Sbjct: 276 TAYGYF--AAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR-----VRGMALNE 328
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG C GR DAI + +M + +++ L+D LCK +AEAE++
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M GV +E Y L+ F + +M + GL ++++Y L+ L V
Sbjct: 389 MEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHK 448
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
LDEAKS M + L+ + Y MM A GK+ E + ++ ILD G
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 33/282 (11%)
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--------------- 117
A+G S S V +++L L + G D+A++ R++ PP
Sbjct: 113 ALGPRRSALASVV--DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARD 170
Query: 118 ------KRL-----AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
+RL A N+ +FN++ D C +G +A +F +M E C PD ++FN+LI
Sbjct: 171 RSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLI 230
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
D K G L E E+L EM G D TY L++ + R++ YF M G+
Sbjct: 231 DGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVM 290
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
N+ ++ V + G++ EA F M V+ + +++ +Y ++ G+LD+ + +
Sbjct: 291 ANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVL 350
Query: 286 VGGILDDGGIEFSEELQEFVKGELSKEGR---EEEVVKLMEK 324
+ ++ G V G L KE + E+V+++MEK
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDG-LCKERKVAEAEDVLRMMEK 391
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 137/325 (42%), Gaps = 58/325 (17%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G AD V Y+ L+ F + G + + F +K + GV+++ V + + + + +G+
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKRE--GVMANVVTFSTFVDAFCKEGLVR 310
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EAM+ + + + ++ ++D C G+ D+A+ L D M + P +N+
Sbjct: 311 EAMKLFAQM--RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP-----LNV 363
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ---------------- 168
++ V+ DG C + + +A +V R M + + L + LI
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423
Query: 169 -------------------LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
LC L EA+ L +M + G+ P+ Y +MDACF+ +
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
V + +K++DSG +PN G L+EA F+ MV K + +D Y
Sbjct: 484 VPEAIAMLQKILDSGFQPN-------------NGCLNEAVQLFNEMVHKGMSLDKVVYTA 530
Query: 269 MMKALSDGGKLDEILEIVGGILDDG 293
++ G L + + ++D G
Sbjct: 531 LLDGYLKQGNLHDAFALKAKMIDSG 555
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 133/292 (45%), Gaps = 35/292 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRD---GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G + V Y+ L+ G ++ +++ V R+ E+ GV ++ ++Y +L+ G+
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEK-----AGVRANELLYTTLIHGH 408
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
FM E+A+ +E +N +++ +++ LCN K DEA L +M P
Sbjct: 409 FMNKNSEKALGLLSEM--KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEP 466
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
N + M D G+ +AI + +K+ + P+ NG L E
Sbjct: 467 -----NYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN-------------NGCLNE 508
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A +L+ EM KG++ D+ Y L+D + + D KM+DSGL+ +L Y +
Sbjct: 509 AVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFIS 568
Query: 238 KLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGG 288
+ M+ EA+ F M+ + D A Y ++ ++ EI E+ GG
Sbjct: 569 GFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLIT------QIPEIRELGGG 614
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + + V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A +LFD M + P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 100/252 (39%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +LM + + + + F + LRP++ +N L+ +++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE + M ++ D +Y ++ L K+D+ E+ +LD+G +
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 133/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++G+ +F+ + + G+ V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHNFCKEGEIRLAQSVFDSITK--WGLRPSVVSFNTLMNGYIKIGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++V + S V+ ++ +++ LC K D+A +LFD M B P N
Sbjct: 189 EGFRL--KSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++R+M PD +++N LI LCK G L + +L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 9/228 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D +S L+ G ++ D LF+E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLB--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G + L D M + P ++
Sbjct: 255 GRVDLAMEIYRQMLSQ--SLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D ++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
+ EM G+ P+ TY ++++ + V G+ ++M G PN
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPN 415
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 100/252 (39%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +I+ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +LM + + + F + GLRP++ +N L+ +++G
Sbjct: 126 ESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE +M ++ D ++ ++ L K+D+ E+ +LB+G +
Sbjct: 186 DLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 149/342 (43%), Gaps = 52/342 (15%)
Query: 2 FVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEEL-KEKLGGVVSDGVVYGSLMKGYFMK 60
F KG + V ++ L+ G + LF++L +E + + V+YG++M G K
Sbjct: 134 FKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICE--PNEVMYGTVMNGLCKK 191
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-- 118
G ++A + + E S K + V+DA C +G D A L + MK + PP
Sbjct: 192 GHTQKAFDLLR--LMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIF 249
Query: 119 ----------------------------RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ N+ +FN + DG C +G+ +DA E+ R M
Sbjct: 250 TYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYM 309
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E PD +++N +ID G + A E++ M +K + PD +Y +L++ ++
Sbjct: 310 IEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKI 369
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM 270
D+ R++ GL+P++ N L+ L ++G A++FFD M+ + D
Sbjct: 370 DEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPD------- 422
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE 312
L ++GG +G +E E + F K E +E
Sbjct: 423 --------LYTHCTLLGGYFKNGLVE--EAMSHFHKLERRRE 454
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 131/271 (48%), Gaps = 10/271 (3%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ ++ F +DG DG L E+K+K + D Y +L+ E +
Sbjct: 215 TYTIVIDAFCKDGMLDGATSLLNEMKQK--SIPPDIFTYSTLIDALCKLSQWENVRTLFL 272
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E + N + + NSV+D LC GK ++A ++ M + P ++ ++N++
Sbjct: 273 EMIHLN--IYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDP-----DVITYNMII 325
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
DGY +G+ A E+F M PD +S+N LI+ + + EA ++ E+S KG+
Sbjct: 326 DGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLK 385
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P T +L+ FE+ R +F +M+ +G P+L + L+G + G+++EA S
Sbjct: 386 PSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSH 445
Query: 252 FDIMVKKLKMDDAS-YKFMMKALSDGGKLDE 281
F + ++ + + Y ++ L GKLD+
Sbjct: 446 FHKLERRREDTNIQIYTAVIDGLCKNGKLDK 476
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 109/220 (49%), Gaps = 5/220 (2%)
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A+ + + V +++ L K +A+ LF ++ E+ N + + +
Sbjct: 131 AIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN----ICEPNEVMYGTVMN 186
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G C +G + A ++ R M + P+T ++ +ID CK+GML A L EM K + P
Sbjct: 187 GLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPP 246
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
D +TY L+DA ++++ ++ T F +M+ + PN+ +N ++ L + G +++A+
Sbjct: 247 DIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIM 306
Query: 253 DIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
M++K + D +Y ++ G++D EI +++
Sbjct: 307 RYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMIN 346
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 124/276 (44%), Gaps = 10/276 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D + Y+ ++ G+ G D +F+ + K + D + Y L+ GY +
Sbjct: 309 MIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINK--SIEPDIISYNILINGYARQ 366
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EAM+ E +K S V N +L L G+ A FD M + + P
Sbjct: 367 KKIDEAMQVCREI--SQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP--- 421
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L + + GY G ++A+ F K+ R + + +ID LCKNG L +A
Sbjct: 422 --DLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ ++ G++PD TY ++ + +D+ RKM D+G + YN +V +
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFL 539
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSD 275
+ + E K+F +I K + A+ + +M +++
Sbjct: 540 RSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAE 575
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/204 (17%), Positives = 83/204 (40%), Gaps = 8/204 (3%)
Query: 117 PKRLAVNLGSFNV-----MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCK 171
P+ + N S +V +++ + DA +FR+M + P SF+ L+ +
Sbjct: 25 PRHYSTNTCSISVKGNFGVSNEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVH 84
Query: 172 NGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ L+ E+ + E+ +++++C ++R D G + G+ N
Sbjct: 85 MKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVT 144
Query: 232 YNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
+ L+ L + +A F +V++ + ++ Y +M L G + +++ +
Sbjct: 145 FTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLL-RL 203
Query: 290 LDDGGIEFSEELQEFVKGELSKEG 313
++ G + + V K+G
Sbjct: 204 MEQGSTKPNTRTYTIVIDAFCKDG 227
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++G+ +F+ + + G+ V + +LM GY G +
Sbjct: 123 GYPASLYFFNILMHRFCKEGEIRVARSVFDAITK--WGLRPSVVSFNTLMNGYIRLGDLD 180
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++ S V+ + +++ LC K D A +LFD M + K L N
Sbjct: 181 EGFRL--KSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLD-----KGLVPNG 233
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M S D +++N LI LCK G L +A+ L E
Sbjct: 234 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDE 293
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG+ PD+ TY L+D C + ++ + ++M+ +R + VY L+ L Q G
Sbjct: 294 MRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGR 353
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y ++ G
Sbjct: 354 SVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 387
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 113/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ DG LF+E+ +K G+V +GV + +L+ G+
Sbjct: 189 MHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDK--GLVPNGVTFTTLIDGHCKN 246
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M+ + P ++
Sbjct: 247 GRVDLAMEIYKQMLSQSLSADL--ITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKI 304
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D + + LI LC+ G +AE+
Sbjct: 305 -----TYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEK 359
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ PD TY ++++ + V G+ ++M G P++
Sbjct: 360 MLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E+
Sbjct: 61 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEIL 120
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP++ +N L+ +++G LD
Sbjct: 121 ECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLD 180
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E M ++ D +Y ++ L K+D E+ +LD G + +
Sbjct: 181 EGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLI 240
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 241 DGH-CKNGR 248
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + + V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A +LFD M + P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 100/252 (39%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +LM + + + + F + LRP++ +N L+ +++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE + M ++ D +Y ++ L K+D+ E+ +LD+G +
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 162/347 (46%), Gaps = 28/347 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK--------LGGVVSD---GVV 49
M +KG ++ V + L+ F + G + F +F + +K L ++ V
Sbjct: 86 MELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVS 145
Query: 50 YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR 109
YG+L+ G G A++ G+ V+ + V N+++D++C +EA L+
Sbjct: 146 YGTLINGLCKVGQARAALQLLRRVDGK--LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 203
Query: 110 MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQL 169
M +E P ++ +++ + G+ G+ KDAI++F KM PD +FN L+D
Sbjct: 204 MVSEGISP-----DVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGF 258
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
CK+G + E + ++ M +G+ P+ TY LMD V +V+ + F M G+ P+
Sbjct: 259 CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDT 318
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGG 288
YN ++ ++ +DEA + F M K + + +Y ++ L GK+ L++V
Sbjct: 319 QSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDE 378
Query: 289 ILDDGG----IEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAE 331
+ D G I +S L L K + ++ + L+ K + + E
Sbjct: 379 MHDRGVPPDIITYSSILD-----ALCKNHQVDKAIALLTKLKDQVFE 420
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 146/340 (42%), Gaps = 73/340 (21%)
Query: 30 FRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNS 89
F L+ E+ + G+ D V Y +L+ G+F+ G ++A++ +N+ + EN +K N
Sbjct: 198 FDLYSEMVSE--GISPDVVTYSALISGFFIVGKLKDAIDLFNKMILEN--IKPDVYTFNI 253
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLA---------------------------- 121
++D C +GK E +F M + P +
Sbjct: 254 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGG 313
Query: 122 VN--LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
VN S+N+M +G+C + +A+ +F+KM P+ +++ +LID LCK+G ++ A
Sbjct: 314 VNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYAL 373
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L EM D+GV PD TY ++DA + ++VD K+ D
Sbjct: 374 KLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKD----------------- 416
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ F D+ VK +D +Y M++ G +E L ++ + D+G I
Sbjct: 417 ---------QVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIP--- 464
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+ E ++ L +K E + AE RE A
Sbjct: 465 ----------DAKTYEIIILSLFKKDENDMAEKLLREMIA 494
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 126/254 (49%), Gaps = 26/254 (10%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
RL + K + G + GSL+K + CY+ A+ + +++ +A+N V
Sbjct: 49 RLLHQ-KNPTPPIFEFGKILGSLVK-----------INCYHTAISLHRQMELKGIASNLV 96
Query: 91 -LDALCNN----GKFDEALKLF-DRMKNEHNPPKRLAVNL-------GSFNVMADGYCGQ 137
L+ L N G+ + +F + +K ++P L S+ + +G C
Sbjct: 97 TLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKV 156
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G+ + A+++ R++ P+ + +N +ID +CK ++ EA +LY EM +G++PD TY
Sbjct: 157 GQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTY 216
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
L+ F V ++ D F KM+ ++P++ +N LV + G + E K+ F +M+K
Sbjct: 217 SALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMK 276
Query: 258 K-LKMDDASYKFMM 270
+ +K + +Y +M
Sbjct: 277 QGIKPNVVTYCSLM 290
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 19/240 (7%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY++ +L GF +DG +F + ++ G+ + V Y SLM GY + +A
Sbjct: 246 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQ--GIKPNVVTYCSLMDGYCLVKQVNKAN 303
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+N V + N +++ C K DEA+ LF +M ++ P N+ ++
Sbjct: 304 SIFNTM--AQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIP-----NVVTY 356
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ DG C G+ A+++ +M + PD +++++++D LCKN + +A L ++ D
Sbjct: 357 TSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKD 416
Query: 188 --------KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
KG N D Y Y +++ ++ KM D+G P+ Y ++ L
Sbjct: 417 QVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSL 476
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 17/233 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y LM G+ + +F + + GGV D Y ++ G+
Sbjct: 274 MMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQ--GGVNPDTQSYNIMINGFCKI 331
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EAM + + +N + + V S++D LC +GK ALKL D M + PP
Sbjct: 332 KKVDEAMNLFKKMHCKN--IIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPP--- 386
Query: 121 AVNLGSFNVMADGYCGQGRFKDAI--------EVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
++ +++ + D C + AI +VF + + D ++ +I C
Sbjct: 387 --DIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVK 444
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
G+ EA L +M D G PD TY +++ + F+ + D R+M+ GL
Sbjct: 445 GLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 153/357 (42%), Gaps = 46/357 (12%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF + V Y LM G +D LF E+ K G+ D Y SL+
Sbjct: 155 EGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAK--GISPDIFTYNSLIHALCNLCEW 212
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK------------------------ 99
+ NE V S + + V+ N V+DALC GK
Sbjct: 213 KHVTTLLNEMV--KSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYA 270
Query: 100 -----------FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
DEA+K+FD M N+ S+N + +GYC R A+ +F
Sbjct: 271 ALMDGHCLRSEMDEAVKVFDMMVR-----NGCVCNVVSYNTLINGYCKIQRIDKAMYLFE 325
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+M P+T++++ LI LC G L +A L+ EM G P+ TY +L+D + +
Sbjct: 326 EMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNH 385
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYK 267
R+ + + + S L P++ VYN + + + G L+ A+ F ++ + L+ D ++
Sbjct: 386 RLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHN 445
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
M++ L G LDE ++ + ++G + +G L + + ++L+E+
Sbjct: 446 IMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQG-LLQNNKTSRAIQLLEE 501
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 134/282 (47%), Gaps = 9/282 (3%)
Query: 46 DGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK 105
D + +L++G + G EA++ +++ VGE + + V ++++ LC + + EAL
Sbjct: 125 DTATFTTLVRGLCVVGKIGEALDVFDKMVGE--GFQPNVVTYGTLMNGLCKDRQLTEALN 182
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
LF M K ++ ++ ++N + C +K + +M + + P+ +S N +
Sbjct: 183 LFSEMI-----AKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIV 237
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+D LCK G + EA ++ M GV PD TY LMD + +D+ F MV +G
Sbjct: 238 VDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGC 297
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILE 284
N+ YN L+ ++ +D+A F+ M ++ L + +Y ++ L G+L + +
Sbjct: 298 VCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIA 357
Query: 285 IVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
+ ++ G I + + L K R E + L++ E
Sbjct: 358 LFNEMVACGQIP-NLVTYSILLDYLCKNHRLAEAMALLKAIE 398
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 119/242 (49%), Gaps = 9/242 (3%)
Query: 90 VLDALCNNGKFDEALKLFDR-MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
V+++ C+ + D AL + + +K H P + +F + G C G+ +A++VF
Sbjct: 97 VINSFCHLNRVDFALSVLAKILKLGHQP------DTATFTTLVRGLCVVGKIGEALDVFD 150
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
KM P+ +++ L++ LCK+ L EA L+ EM KG++PD +TY L+ A +
Sbjct: 151 KMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLC 210
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYK 267
T +MV S + PN+ N +V L + G + EA D+M++ ++ D +Y
Sbjct: 211 EWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYA 270
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
+M ++DE +++ ++ +G + + G K R ++ + L E+ R
Sbjct: 271 ALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGY-CKIQRIDKAMYLFEEMCR 329
Query: 328 EK 329
++
Sbjct: 330 QE 331
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 32/228 (14%)
Query: 100 FDEALKLFDRMKNEHNPPK---------------------RLAVNLGSFNVMADGY---- 134
D+AL F RM + H PP L+ + SF + D Y
Sbjct: 37 LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96
Query: 135 -----CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
C R A+ V K+ + PDT +F L+ LC G + EA +++ +M +G
Sbjct: 97 VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
P+ TYG LM+ + ++ + F +M+ G+ P++ YN L+ L +
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216
Query: 250 SFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+ + MVK K+ + S ++ AL GK+ E ++V ++ GG+E
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMI-QGGVE 263
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 133/279 (47%), Gaps = 10/279 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G +D VY+ L+ R G+ F LF+EL EK G+ YG+L+ G G
Sbjct: 323 RGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEK--GLSPSSYTYGALIDGVCKVGEM 380
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A NE ++ V ++ V N+++D C G DEA ++D M+ K +
Sbjct: 381 GAAEILMNEM--QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQ-----KGFQAD 433
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + N +A + R+ +A + +M E T+S+ NLID CK G + EA+ L+
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFV 493
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EMS KGV P+ TY +++ A + ++ + M +G+ P+ Y L+
Sbjct: 494 EMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD 553
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
+DEA F M +K L + +Y M+ LS GK DE
Sbjct: 554 NVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDE 592
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 7/243 (2%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+K A N++++A F + MK + + N ++ ++ + G+
Sbjct: 255 IKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG-----VVYNKVTYTLLMELSVKNGK 309
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
DA ++F +M E D + +LI C+ G + A L+ E+++KG++P YTYG
Sbjct: 310 MSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGA 369
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
L+D +V + +M G+ V+N L+ + GM+DEA +D+M +K
Sbjct: 370 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG 429
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
+ D + + + + DE + + ++ +GG++ S + KEG EE
Sbjct: 430 FQADVFTCNTIASCFNRLKRYDEAKQWLFRMM-EGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 319 VKL 321
+L
Sbjct: 489 KRL 491
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 15/225 (6%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
R F E++ L VV+DG F K EE + + + V
Sbjct: 111 RRFNEMRSLLNSVVNDG----------FYKRPVEELGSAMVDCDISEEKFEFFEKFFDLV 160
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+NG F+E L++FD M K L+++ S V + R +E+FR+M
Sbjct: 161 FRVYVDNGMFEEGLRVFDYM-----VKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRM 215
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+ S +++ LC+ G + ++++L E S KG+ P+ YTY +++A +
Sbjct: 216 VDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDF 275
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+ M G+ N Y L+ V+ G + +A+ FD M
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 160/367 (43%), Gaps = 52/367 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ GF R G + F LF E+ E G+ + V Y +++ GY +
Sbjct: 477 GLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEH--GISPNVVTYNAIINGYLTVAKVD 534
Query: 65 EAMECYNEAV--------------------------GENSSVKM-------SAVANNSVL 91
+A+ + + V EN KM + + S +
Sbjct: 535 DALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFI 594
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
D LC NG+ A K+F MK P NL +++ + DG C +G+ +DA ++
Sbjct: 595 DGLCKNGRTSLAFKIFHEMKKRDYFP-----NLCTYSSLIDGLCQEGQAEDA----ERLL 645
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY-GLLMDACFEVNRV 210
+ C P+ ++ L+ LC G EA++L M KG+ P E Y LL+ C + V
Sbjct: 646 DDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNL-EV 704
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+ F MV +G +P L+ Y L+ L + +A+ F M+KK D+ + +
Sbjct: 705 ESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVL 764
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK----K 325
+ L G+ D LE++ +++ + + + + ELS G E+ ++ ++ K
Sbjct: 765 LDGLLKEGETDLSLELL-HVMESRNCTLNFQTRVMLARELSALGCSIEIPQISKQLGIVK 823
Query: 326 EREKAEA 332
E++K A
Sbjct: 824 EKQKQTA 830
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 139/294 (47%), Gaps = 10/294 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+F G D Y+ L++G ++G+ D F +F+ + + G + V Y +L+ G +
Sbjct: 228 IFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKD--GCDPNSVTYSALINGLCSE 285
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEAM+ E + + ++ + A + +LC+ G+ EA+KL +MK P
Sbjct: 286 GRLEEAMDMLEEMI--DKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGP--- 340
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + G G+F+ AI V+ KM P ++++ LI+QL G A
Sbjct: 341 --NVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALT 398
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M P+ TY +++ + + F +M+ +G PN+ YN ++
Sbjct: 399 IFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYF 458
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G ++ A ++M LK+D +Y ++ S GGKL+ + +++ G
Sbjct: 459 KQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHG 512
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 10/268 (3%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ L+ G RDG + ++ ++ G+V V Y +L+ +++G E A+ +
Sbjct: 344 TYTALISGLSRDGKFEVAIGVYHKMLAD--GLVPTAVTYSALINQLYVEGRFETALTIFE 401
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+ +S N ++ C+ G +A +FD+M P N+ ++N++
Sbjct: 402 WMLSHDSLPNTETY--NVIIKGFCSIGYIQKATAIFDQMLKAGPSP-----NVITYNIII 454
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
Y QG +A+ + M DT ++ NLI + G L A L+ EM + G++
Sbjct: 455 HIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGIS 514
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P+ TY +++ V +VDD F KMV+SG P+ YN ++ + + EA++F
Sbjct: 515 PNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENF 574
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGK 278
MVK+ L + +Y + L G+
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCKNGR 602
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 6/235 (2%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
NS ++ + N+++ LCN GK EA + + + P ++ + G+C
Sbjct: 195 NSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTF-----TYTSLIIGHCK 249
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
G A E+F +M + C P++++++ LI+ LC G L EA ++ EM DKG+ P +
Sbjct: 250 NGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHA 309
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
Y + + + + R + KM G PN+ Y L+ L + G + A + M+
Sbjct: 310 YTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKML 369
Query: 257 KK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELS 310
L +Y ++ L G+ + L I +L + +E +KG S
Sbjct: 370 ADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCS 424
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 2/202 (0%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
NL +FN M C +G+ ++A + + Y PDT ++ +LI CKNG L A E++
Sbjct: 201 NLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMF 260
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M G +P+ TY L++ R+++ +M+D G+ P + Y + L
Sbjct: 261 DRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDA 320
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G EA M K+ + +Y ++ LS GK + + + +L DG + +
Sbjct: 321 GRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTY 380
Query: 302 QEFVKGELSKEGREEEVVKLME 323
+ +L EGR E + + E
Sbjct: 381 SALI-NQLYVEGRFETALTIFE 401
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L + LG F++ DG GR +V+ +M P+ +FN +I LC G + EAE
Sbjct: 173 LLIQLGKFDM--DGL---GR-----DVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAE 222
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ G + G PD +TY L+ + +D F +MV G PN Y+ L+ L
Sbjct: 223 LIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGL 282
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
G L+EA + M+ K ++ +Y + +L D G+ E ++++G + G
Sbjct: 283 CSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNV 342
Query: 299 EELQEFVKGELSKEGREEEVVKLMEK 324
+ + G LS++G+ E + + K
Sbjct: 343 QTYTALISG-LSRDGKFEVAIGVYHK 367
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 4/213 (1%)
Query: 119 RLAVNLGSFNVMADGYC-GQGRFKDAIEVFRKMGE-YRCSPDTLSFNNLIDQLCKNGMLA 176
RL V + ++ C +G K I+V ++ Y SF+ L+ QL K M
Sbjct: 125 RLFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDG 184
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++Y EM + G+ P+ +T+ ++ +V + + G P+ Y L+
Sbjct: 185 LGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLI 244
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+ G LD A FD MVK + +Y ++ L G+L+E ++++ ++D GI
Sbjct: 245 IGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDK-GI 303
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
E + L GR E VKL+ K ++
Sbjct: 304 EPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKR 336
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 124/313 (39%), Gaps = 87/313 (27%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRD---GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G V + V Y+ LM G GD+ VF E + G + Y +L+ GY
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQME-----INGCCPNVRTYSALIDGY 396
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G + A E +N + + VA ++D LC N F++A L + M+ E+ PP
Sbjct: 397 AKAGDLDGASEVWNWMITH--GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPP 454
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQL-------- 169
N +FN G CG GR AI+VF +MG C P+T ++N L+D L
Sbjct: 455 -----NTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGE 509
Query: 170 ---------------------------CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
C GML EA EL G+M +G PD T +++D
Sbjct: 510 AFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVID 569
Query: 203 A------------------------------------CFEVNRVDDGATYFRKMVDSGLR 226
A C + V++ Y R+M+ G+
Sbjct: 570 AYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIG-VEEAIVYLRRMLSEGIS 628
Query: 227 PNLAVYNRLVGKL 239
PN+A +N LV L
Sbjct: 629 PNVATWNVLVRHL 641
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 18/326 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF +G + ++ L+ GF G S ++ + + GVV + V Y +LM G K
Sbjct: 307 MFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE--GVVPNVVAYNALMHGLCSK 364
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A+ +N+ E + + ++++D G D A ++++ M P
Sbjct: 365 RSLGDAVSVFNQM--EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHP--- 419
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ M D C F A + M C P+T++FN I LC +G + A +
Sbjct: 420 --NVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIK 477
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M + G P+ TY L+D+ + R + + M G+ NL YN ++
Sbjct: 478 VFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYC 537
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV----GGILDDGGI 295
GML EA ++V+ K D + ++ A GK++ ++++ G I
Sbjct: 538 CAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDII 597
Query: 296 EFSEELQEFVKGELSKEGREEEVVKL 321
++ + G + G EE +V L
Sbjct: 598 AYT----SLISGICTHIGVEEAIVYL 619
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 138/319 (43%), Gaps = 18/319 (5%)
Query: 9 DPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+P V++Y L+ ++ DG +L E+ K G D V Y +L+ G +EA
Sbjct: 178 EPNVFTYNILLKALCKNNRVDGAHKLLVEMSSK--GCDPDEVSYTTLISSLCKLGKVKEA 235
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
E A+ SV + N++++ +C F+EA +L D M N+ P N+ S
Sbjct: 236 REL---AMSFTPSVPVY----NALINGVCKEYTFEEAFQLLDEMMNKGIDP-----NVIS 283
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+ + + G + ++ V KM CSP+ +F +LI G EA + + M
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+GV P+ Y LM + D + F +M +G PN+ Y+ L+ + G LD
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
A ++ M+ + +Y M+ L ++ ++ + + + F+
Sbjct: 404 GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463
Query: 306 KGELSKEGREEEVVKLMEK 324
KG L GR + +K+ ++
Sbjct: 464 KG-LCGSGRVDWAIKVFDQ 481
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 20/222 (9%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+ + V ++ + G G D ++F+++ G + Y L+ +K
Sbjct: 447 MQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGN--SGCFPNTTTYNELLDS-LLK 503
Query: 61 GMEEEAMECYNEAVG-----ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
+ EA G E+ ++++ V N+++ C G EAL+L +M
Sbjct: 504 DRR------FGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P + VN ++ D YC QG+ AI++ ++ + PD +++ +LI +C + +
Sbjct: 558 KPDAITVN-----IVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGV 612
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
EA M +G++P+ T+ +L+ F N GA F
Sbjct: 613 EEAIVYLRRMLSEGISPNVATWNVLVRHLFS-NMGHSGAVQF 653
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 111/278 (39%), Gaps = 36/278 (12%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y +++ + S K + + +++ L + + D L +MK E ++ + F
Sbjct: 62 YFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLE-----GISCSEDLFIS 116
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ Y G + A++ F +M ++R P +N+++D L +Y M G
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ P+ +TY +L+ A + NRVD +M G P+ Y L+ L ++G + EA+
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236
Query: 250 ----SFF---------------------------DIMVKKLKMDDASYKFMMKALSDGGK 278
SF ++M K + + SY ++ ALSD G
Sbjct: 237 ELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGN 296
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
++ L ++ + G +KG K G E
Sbjct: 297 VELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHE 334
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 47/286 (16%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G + YG ++ G A++ + E+ +K V ++D LC +G+ D
Sbjct: 225 GCQPNQFTYGPILNRMCKSGNTASALDLLRKM--EHRKIKPHVVTYTIIIDNLCKDGRLD 282
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+AL F M+ K + N+ ++N + +C GR+ D ++ R M + +P+ ++
Sbjct: 283 DALSFFSEMET-----KGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVT 337
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGV------------------------------- 190
F+ LID L K G L EA++LY EM +G+
Sbjct: 338 FSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMV 397
Query: 191 ----NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+PD +TY +L++ + +VDDG FRKM G+ + Y+ L+ Q L
Sbjct: 398 SKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLI 457
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
AK F MV + + +Y ++ L D G+L+E L GILD
Sbjct: 458 VAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEAL----GILD 499
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 119/241 (49%), Gaps = 8/241 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G + V + +L+ G ++G EA+E + V + + N++++ LC +
Sbjct: 155 GYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDL--ITLNTIVNGLCLKDRVS 212
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EA+ L RM P + ++ + + C G A+++ RKM + P ++
Sbjct: 213 EAVDLIARMMANGCQPNQF-----TYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ +ID LCK+G L +A + EM KG+ + +TY L+ + R DDGA R M+
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
+ PN+ ++ L+ LV+ G L EAK ++ M+ + ++ + +Y ++ L + +LD
Sbjct: 328 TRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLD 387
Query: 281 E 281
E
Sbjct: 388 E 388
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 151/312 (48%), Gaps = 14/312 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG A+ Y+ L+ F G D +L ++ + + + V + +L+ +
Sbjct: 291 METKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITR--KITPNVVTFSALIDSLVKE 348
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + YNE + ++ + + NS++ LCN+ + DEA ++ D M ++ P
Sbjct: 349 GKLTEAKDLYNEMI--TRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDP--- 403
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N++ +G+C + D + +FRKM DT++++ LI C++ L A++
Sbjct: 404 --DIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKK 461
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM +GV+P TY +L+D + +++ +M + ++ +YN ++ +
Sbjct: 462 VFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMC 521
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GI 295
+D+A S F + K +K D SY M+ L L E + + +DG G
Sbjct: 522 NANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGC 581
Query: 296 EFSEELQEFVKG 307
++ ++ ++G
Sbjct: 582 TYNTLIRAHLRG 593
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 118/293 (40%), Gaps = 45/293 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D Y+ L+ GF + D RLF K L G+++D V Y +L++G+
Sbjct: 396 MVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFR--KMSLRGMIADTVTYSTLIQGF--- 450
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
C + K A K+F M ++ P
Sbjct: 451 ----------------------------------CQSRKLIVAKKVFQEMVSQGVHP--- 473
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ ++ DG C G ++A+ + +M + + D +N +I +C + +A
Sbjct: 474 --GIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWS 531
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ + KGV D +Y +++ + + + + FRKM + G P+ YN L+ +
Sbjct: 532 LFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHL 591
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
+ + + + M + D ++ K +M LS G L ++ G D
Sbjct: 592 RGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSGELDKSFLNMLSGPFGD 644
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 115/269 (42%), Gaps = 46/269 (17%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+ + N + L ++D L L +M+ K +A +L + N+M + +C + +
Sbjct: 89 TVIDFNRLFGLLARTKQYDLVLALCKQME-----LKGIAYDLYTLNIMINCFCRRRKLGF 143
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLC------------------------------KN 172
A K+ + P+T++FN L++ LC N
Sbjct: 144 AFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVN 203
Query: 173 GM-----LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
G+ ++EA +L M G P+++TYG +++ + RKM ++P
Sbjct: 204 GLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKP 263
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE----I 282
++ Y ++ L + G LD+A SFF M K +K + +Y ++ + G+ D+ +
Sbjct: 264 HVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLL 323
Query: 283 LEIVGGILDDGGIEFSEELQEFVK-GELS 310
+++ + + FS + VK G+L+
Sbjct: 324 RDMITRKITPNVVTFSALIDSLVKEGKLT 352
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 10/198 (5%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA+ +F+ M R P + FN L L + L +M KG+ D YT +++
Sbjct: 73 DAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMI 132
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
+ ++ + K+ G PN +N L+ L G + EA D MV +
Sbjct: 133 NCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHV 192
Query: 262 DD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG----ELSKEGREE 316
D + ++ L ++ E ++++ ++ +G + +F G + K G
Sbjct: 193 PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGC-----QPNQFTYGPILNRMCKSGNTA 247
Query: 317 EVVKLMEKKEREKAEAKA 334
+ L+ K E K +
Sbjct: 248 SALDLLRKMEHRKIKPHV 265
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 142/294 (48%), Gaps = 13/294 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + V ++ + + G + L E++ E G + V Y +L+ G+ ++
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEH--GCEVNIVTYNALVNGFCVQ 438
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+E + + K + + ++L LCN + D A +L M + P
Sbjct: 439 GRVDSALELF-----YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAP--- 490
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +FNV+ +C +G +AIE+ +M E+ C+P+ +++N L+D + K+ EA E
Sbjct: 491 --NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALE 548
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L + GV+PD TY ++ +RV++ F + D G+RP +YN+++ L
Sbjct: 549 LLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALC 608
Query: 241 QVGMLDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ D A FF MV M ++ +Y +++ L++ L E +++ + G
Sbjct: 609 KRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 19/294 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ ++ G R+G D L G D V Y +++KG
Sbjct: 206 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY--GFQPDTVSYTTVLKGLCAA 263
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL----CNNGKFDEALKLFDRMKNEHNP 116
E+ E + E + +N + N D L C G + A+++ ++M
Sbjct: 264 KRWEDVEELFAEMMEKN------CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG-- 315
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
A N N++ + C QGR DA + MG Y CSPDT+S+ ++ LC+
Sbjct: 316 ---CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 372
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A+EL EM K P+E T+ + + ++ +M + G N+ YN LV
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 432
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
G +D A F M K + +Y ++ L + +LD E++ +L
Sbjct: 433 NGFCVQGRVDSALELFYSM--PCKPNTITYTTLLTGLCNAERLDAAAELLAEML 484
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 123/282 (43%), Gaps = 12/282 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D + L++ +G +A A E S + A N+++ C G+ D
Sbjct: 73 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAA--ERSGTAVDVFAYNTLVAGYCRYGQLD 130
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
A +L M +A + ++ + G C +GR +A+ + M C P ++
Sbjct: 131 AARRLIASMP--------VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVT 182
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ L++ +CK+ +A E+ EM KG P+ TY ++++ RVDD + ++
Sbjct: 183 YTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLS 242
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLD 280
G +P+ Y ++ L ++ + F ++M K ++ ++ +++ GG ++
Sbjct: 243 SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVE 302
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
++++ + G + L V + K+GR ++ + +
Sbjct: 303 RAIQVLEQ-MSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
LAEA L + +G PD Y L+ R D A R SG ++ YN
Sbjct: 59 LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
LV + G LD A+ M + D +Y +++ L D G++ E L ++ +L G
Sbjct: 119 LVAGYCRYGQLDAARRLIASM--PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175
>gi|115453133|ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group]
gi|108708311|gb|ABF96106.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113548638|dbj|BAF12081.1| Os03g0363700 [Oryza sativa Japonica Group]
Length = 564
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 153/324 (47%), Gaps = 14/324 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V D V+Y ++ G R+F E+K L G D V Y + + G
Sbjct: 246 MIAAGSVPDTVIYQRIIHGLFAHKMGSEALRVFNEIK--LRGYNVDAVTYTTAIDGLCKM 303
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA + +NE V + ++ + A S++ C G F+ A K++D M K L
Sbjct: 304 GCIDEARQIWNEMV--DKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLG-----KGL 356
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ S N++ G+C GR +A+ +F +M + D +++N LI LCK G L+EA +
Sbjct: 357 KESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQ 416
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+Y ++ G+ P T+ L+D E +VD + M GL P + + ++
Sbjct: 417 VYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAAVELLKVMHAKGLEPLARINDSIINGFC 476
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGIL----DDGGI 295
+ ++ ++ M+KK LK + ++ +++ LS G++D+ L ++ + + G +
Sbjct: 477 KARRPEDGMAWLAGMLKKNLKPREHTFNSLVELLSSSGRVDDALLVLNTMFKIGHELGSL 536
Query: 296 EFSEELQEFVKGELSKEGREEEVV 319
+ +++ G+L E ++
Sbjct: 537 ACTMLVEQLCTGKLCYSHELENIL 560
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 33/315 (10%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V G + V Y+ L+ F R G+ + L E+++ + GV + V +++ G G
Sbjct: 239 VHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENE--GVPQNIVTLNTIVGGLCRAGR 296
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKRLA 121
A+E + E K +AV ++++ AL + A++LF ++M H+P +
Sbjct: 297 TGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMY 356
Query: 122 VNLGS-----------------------------FNVMADGYCGQGRFKDAIEVFRKMGE 152
+ S +N++ G+C + R +A E+ ++M E
Sbjct: 357 FTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKE 416
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
PD ++N L+ CK G A +EL G+M D G P T+G L+ +V ++D+
Sbjct: 417 VGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDE 476
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
R M +SG+ PN +YN L+ L + G +D A FD M +K + + ++ ++K
Sbjct: 477 ALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLK 536
Query: 272 ALSDGGKLDEILEIV 286
L D ++ E++
Sbjct: 537 GLRDKNMPEKAFELM 551
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 13/284 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D ++ ++ R D G+ R++ L + V D V YG L+ G G +A+
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYA-LMQGCASVRPDVVTYGILVNGLCKAGRVGDALR 193
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD-RMKNEHNPPKRLAVNLGSF 127
+ ++ ++ V N+V+D LC +G+ EAL + RM + H P N ++
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPP----NTVTY 249
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + D +C G A E+ KM + ++ N ++ LC+ G A E + E
Sbjct: 250 NCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--K 307
Query: 188 KGVNP----DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ V P + TY L+ A N V F + + G P+ +Y ++ L Q G
Sbjct: 308 RTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAG 367
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
L++A S M + K+D +Y ++ +L E E++
Sbjct: 368 RLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELL 411
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 136/320 (42%), Gaps = 13/320 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y L+ G + G R+ + + + + D V +++ G G +EA+
Sbjct: 171 DVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALA 230
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + + V N ++DA C G A +L ++M+NE P N+ + N
Sbjct: 231 FVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQ-----NIVTLN 285
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSP----DTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ G C GR A+E FR+ + P + ++++ L+ L + A EL+ E
Sbjct: 286 TIVGGLCRAGRTGAALEFFRE--KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHE 343
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+G +PD Y ++ + R++D + M ++G + + YN L+ +
Sbjct: 344 KMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKR 403
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L EA M + ++ D +Y ++ G + E++G ++DDG
Sbjct: 404 LHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGT 463
Query: 304 FVKGELSKEGREEEVVKLME 323
V G K G+ +E ++++
Sbjct: 464 LVHG-YCKVGKIDEALRILR 482
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 116/273 (42%), Gaps = 10/273 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V YS L+ + + LF E + G D ++Y +++ G G E+A C
Sbjct: 319 VTYSTLVGALLHTNNVGMAMELFHEKMSE--GHSPDAIMYFTMISGLTQAGRLEDA--CS 374
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + K+ A N ++ C + EA +L MK P ++ ++N +
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRP-----DVCTYNTL 429
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C G F E+ KM + C P ++F L+ CK G + EA + M + G+
Sbjct: 430 LSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGI 489
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+P+ Y L+D + VD F +M + + N+ +N L+ L M ++A
Sbjct: 490 HPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFE 549
Query: 251 FFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEI 282
D M ++ D + +M+ L G+ D +
Sbjct: 550 LMDQMREERCFPDYVTVDVLMEWLPVIGETDRL 582
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 9/249 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D ++Y ++ G + G + + +KE G D Y L+ G+ K
Sbjct: 347 EGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE--AGFKLDTKAYNILIAGFCRKKRL 404
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E E + ++ N++L C G F +L +M ++ P +
Sbjct: 405 HEAYELLQEM--KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVI--- 459
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+F + GYC G+ +A+ + R M E P+ + +N LID LCK G + A EL+
Sbjct: 460 --TFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFD 517
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +K V + T+ L+ + N + +M + P+ + L+ L +G
Sbjct: 518 EMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIG 577
Query: 244 MLDEAKSFF 252
D K F
Sbjct: 578 ETDRLKRFM 586
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 10/266 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
++ LM F +DGD +F+ + + G+ V Y +LM GY G E +
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAK--WGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSA 200
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ S V+ + +++ LC K D+A +LFD M K L N +F + D
Sbjct: 201 MLA--SGVQPDVYTYSVLINGLCKESKMDDANELFDEM-----LVKGLXPNGVTFTTLID 253
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G+C GR A+E++++M PD +++N LI LCK G L +A +L EMS KG+
Sbjct: 254 GHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKX 313
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM-LDEAKSF 251
D+ TY L+D C + +D + ++M+ +R + Y L+ L Q G +D K
Sbjct: 314 DKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKML 373
Query: 252 FDIMVKKLKMDDASYKFMMKALSDGG 277
+++ LK D +Y ++ G
Sbjct: 374 REMLSVGLKPDTXTYTMIINEFCKKG 399
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ K G+ +GV + +L+ G+
Sbjct: 201 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK--GLXPNGVTFTTLIDGHCKN 258
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G +A L D M K L
Sbjct: 259 GRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM-----KGL 311
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 312 KXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 371
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G+ PD TY ++++ + V G+ + M +G P++ YN L+
Sbjct: 372 MLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLM 427
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 111/239 (46%), Gaps = 9/239 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V Y+ LM G++R GD + FRL + GV D Y L+ G + +
Sbjct: 170 GLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLA--SGVQPDVYTYSVLINGLCKESKMD 227
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E ++E + + + + V +++D C NG+ D A++++ +M ++ P +L
Sbjct: 228 DANELFDEMLVKG--LXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLP-----DL 280
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C +G K A ++ +M D +++ LID CK G L A E
Sbjct: 281 ITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKR 340
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + + D+ Y L+ + R D R+M+ GL+P+ Y ++ + + G
Sbjct: 341 MIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKG 399
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 9/202 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG + V ++ L+ G ++G D +++++ + ++ D + Y +L+ G K
Sbjct: 236 MLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKK 293
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A + +E +K + +++D C G D A + RM E+ +
Sbjct: 294 GDLKQAHDLIDEM--SMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQEN-----I 346
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ + G C +GR DA ++ R+M PDT ++ +I++ CK G + + +
Sbjct: 347 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSK 406
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L +M G P TY +LM+
Sbjct: 407 LLKDMQRNGHAPSVVTYNVLMN 428
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 108/205 (52%), Gaps = 13/205 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + + V YS ++ GF + G D LF E++ + D V Y +L+ Y
Sbjct: 400 MPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL--NIALDRVSYNTLLSIYTKV 457
Query: 61 GMEEEAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G EEA++ E +VG +K V N++L GK+DE K+F MK EH P
Sbjct: 458 GRSEEALDILREMASVG----IKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLP- 512
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
NL +++ + DGY G +K+A+EVFR+ D + ++ LID LCKNG++ A
Sbjct: 513 ----NLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDA 203
L EM+ +G++P+ TY ++DA
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 11/286 (3%)
Query: 2 FVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
F G+ +S L+ + R G + +F +KE G+ + V Y +++ G
Sbjct: 260 FSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY--GLRPNLVTYNAVIDACGKGG 317
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK-LFDRMKNEHNPPKRL 120
ME + + + + + N V+ + NS+L A+C+ G EA + LFD M N +R+
Sbjct: 318 MEFKQVAKFFDEMQRNC-VQPDRITFNSLL-AVCSRGGLWEAARNLFDEMSN-----RRI 370
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+N + D C G+ A E+ +M R P+ +S++ +ID K G EA
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+GEM + D +Y L+ +V R ++ R+M G++ ++ YN L+G
Sbjct: 431 LFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI 285
+ G DE K F M ++ + + +Y ++ S GG E +E+
Sbjct: 491 KQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEV 536
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 134/297 (45%), Gaps = 20/297 (6%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D Y+ L+ + G D F + ++ K ++ + V Y +++ G+ G +EA+
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPAK--RIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ E N + + V+ N++L G+ +EAL + M + + ++ ++N
Sbjct: 431 LFGEMRYLN--IALDRVSYNTLLSIYTKVGRSEEALDILREMASVG-----IKKDVVTYN 483
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ GY QG++ + +VF +M P+ L+++ LID K G+ EA E++ E
Sbjct: 484 ALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSA 543
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ D Y L+DA + V + +M G+ PN+ YN ++ + ++ +
Sbjct: 544 GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERS 603
Query: 249 KSFFDIMVKKLKMDDASYKFMMKALSDGGKL--DEILEIVGGILDDGGIEFSEELQE 303
+ + S F ALS+ + + ++++ G + +G +++ +E
Sbjct: 604 ADY---------SNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKE 651
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 90/241 (37%), Gaps = 73/241 (30%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G+ + G D V ++F E+K + V+ + + Y +L+ GY G+ +
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKRE--HVLPNLLTYSTLIDGYSKGGLYK 531
Query: 65 EAME------------------------CYNEAVGENSS---------VKMSAVANNSVL 91
EAME C N VG S + + V NS++
Sbjct: 532 EAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 92 DAL------------CNNGKF---------------DEALKLFDRMKNEHNPPKRLAVNL 124
DA N G + ++LF ++ +E
Sbjct: 592 DAFGRSATMERSADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSE----------- 640
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
G+ + D G +EVFRKM + P+ ++F+ +++ + +A L E
Sbjct: 641 GNNRMTKDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEE 700
Query: 185 M 185
+
Sbjct: 701 L 701
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+I L + G + A+ ++ G Y + L+ A ++ + F M + G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 225 LRPNLAVYNRLVGKLVQVGM-LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
LRPNL YN ++ + GM + FFD M + ++ D ++ ++ S GG
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGG 353
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 16/321 (4%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
+ F+ +K K + Y L++G+ G EA + ++E G + + +A NS+
Sbjct: 204 QFFDRVKHKFE---AKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCA--LDVLAYNSL 258
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
L+ALC G DEA K+F + + P + S+ + YC V +M
Sbjct: 259 LEALCKGGNVDEAYKMFREIGSHGVEP-----DACSYAIFIRAYCEANNIHSVFSVLDRM 313
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
Y P+ ++N +I +LCKNG + +A +L EM ++GV+PD ++Y ++ E + V
Sbjct: 314 KRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEV 373
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+ MV P+ YN L+ LV+VG D A ++ M ++ ++Y M
Sbjct: 374 NRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVM 433
Query: 270 MKALS-DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
+ L GKL+E ++D+G ++ + E ++ L G + + L K ER
Sbjct: 434 IHGLCKKKGKLEEACRYFETMIDEGIPPYASTI-EMLRNRLIGFGLLDHIEILACKMERG 492
Query: 329 KA---EAKAREAEAAEAAKRS 346
+ + A+E +A RS
Sbjct: 493 TSCSIQELAKEMRGNKACVRS 513
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 113/272 (41%), Gaps = 42/272 (15%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+ +L LC A + FDR+K+ + +++++ G+ G +A +VF
Sbjct: 187 DKLLYVLCKCKHVKCAQQFFDRVKH------KFEAKAKTYSILVRGWGDIGEAVEARKVF 240
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M C+ D L++N+L++ LCK G + EA +++ E+ GV PD +Y + + A E
Sbjct: 241 DEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEA 300
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE-------------------- 247
N + + +M L PN+ YN ++ KL + G +++
Sbjct: 301 NNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSY 360
Query: 248 ---------------AKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILD 291
A IMVK + D SY ++K L G+ D EI + +
Sbjct: 361 NTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGE 420
Query: 292 DGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
G + G K+G+ EE + E
Sbjct: 421 RGFYPSVSTYSVMIHGLCKKKGKLEEACRYFE 452
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DAI F +M E+ P + L+ LCK + A++ + + K TY +L+
Sbjct: 166 DAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHK-FEAKAKTYSILV 224
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLK 260
++ + F +M G ++ YN L+ L + G +DEA K F +I ++
Sbjct: 225 RGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVE 284
Query: 261 MDDASYKFMMKALSDGGKLDEILEIV 286
D SY ++A + + + ++
Sbjct: 285 PDACSYAIFIRAYCEANNIHSVFSVL 310
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 127/255 (49%), Gaps = 9/255 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ ++ G + G++ L ++++E G + V Y +++ +
Sbjct: 194 MVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEE--AGCQPNVVTYSTIIDSHRKD 251
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA++ ++ + + NS++ LCN ++ EA L + M++ + P
Sbjct: 252 RRVNEALDIFSYM--KVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMP--- 306
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +FNV+ D C +G+ +A V + M E PD +++++L+ + EA +
Sbjct: 307 --DIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARK 364
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M KG PD ++Y +L++ +V R+D+ F +M+ GL PN YN L+ L
Sbjct: 365 LFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLC 424
Query: 241 QVGMLDEAKSFFDIM 255
Q+G L EA++ F M
Sbjct: 425 QLGSLREARNLFKNM 439
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 151/359 (42%), Gaps = 47/359 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V YS ++ +D + +F +K K G+ D Y SL++G +
Sbjct: 233 GCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVK--GISPDIFTYNSLIQGLCNFSQWK 290
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL-------------------- 104
EA NE N + V N ++D +C GK EA
Sbjct: 291 EASALLNEMRSLN--IMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSS 348
Query: 105 ---------------KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
KLFD M + P ++ S+N++ +GYC R +A ++F +
Sbjct: 349 LMYGYSLRSEVVEARKLFDAMITKGCKP-----DVFSYNILINGYCKVKRIDEAKQLFNE 403
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M +P+ +S+N LI LC+ G L EA L+ M G P+ +TY +L+D +
Sbjct: 404 MIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGY 463
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKF 268
FR M + +PNL +YN L+ + + G L +A+ F ++ VK L+ + Y
Sbjct: 464 FGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTT 523
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSK--EGREEEVVKLMEKK 325
++ L G LDE LE + +DG ++G L E R +++ M K
Sbjct: 524 IINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDK 582
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 10/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V ++ L+ + G LF+++ + G D Y +++ G G
Sbjct: 163 GLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVAR--GCRPDVYTYTTIINGLCKIGETA 220
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + E + + + V ++++D+ + + +EAL +F MK K ++ ++
Sbjct: 221 AAAGLLKKM--EEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMK-----VKGISPDI 273
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C ++K+A + +M PD ++FN L+D +CK G ++EA+ +
Sbjct: 274 FTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKT 333
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M++ GV PD TY LM + V + F M+ G +P++ YN L+ +V
Sbjct: 334 MTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKR 393
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+DEAK F+ M+ + L ++ SY ++ L G L E
Sbjct: 394 IDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLRE 431
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 82/163 (50%), Gaps = 1/163 (0%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L+ N+ + +++ + + R A V K+ + P ++F LI+ LCK G A+A
Sbjct: 129 LSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAM 188
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ +M +G PD YTY +++ ++ A +KM ++G +PN+ Y+ ++
Sbjct: 189 ELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSH 248
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
+ ++EA F M VK + D +Y +++ L + + E
Sbjct: 249 RKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKE 291
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ L+ G + G LF+ + G + + Y L+ G+ +
Sbjct: 404 MIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHT--NGNLPNLFTYSILLDGFCKQ 461
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + +++ K + V N ++DA+C +G +A KLF + K L
Sbjct: 462 GYFGKAFRLFRAM--QSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELF-----VKGL 514
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N + + +G C +G +A+E FR M E C PD +S+N +I + + A +
Sbjct: 515 QPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQ 574
Query: 181 LYGEMSDKGVNPD 193
L GEM DKG D
Sbjct: 575 LIGEMRDKGFIAD 587
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE-ELYGEMSDKGV 190
D C DA+ F M + P + F L+ + K G + L +M G+
Sbjct: 70 DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+P+ YT +L++ + RVD + K++ GL+P + + L+ L +VG +A
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189
Query: 251 FFDIMVKK-LKMDDASYKFMMKALSDGG 277
FD MV + + D +Y ++ L G
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIG 217
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 10/296 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + V+Y+ L+ F ++G + +L ++++E G+V + S +
Sbjct: 208 MRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMRED--GLVPHVETFNSRISALCGS 265
Query: 61 GMEEEAMECYNE-AVGENSSVKMSAVANNSV-LDALCNNGKFDEALKLFDRMKNEHNPPK 118
G EA + + + E + V + L C G +EA L D MK N
Sbjct: 266 GKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNAN--- 322
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+NL S+N+ G G+ +A V ++M PD S+N ++D LCKNGML++A
Sbjct: 323 --FINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDA 380
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
L G M G+ PD TY L+ +V + +M+ + PN N L+
Sbjct: 381 RMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHS 440
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L + G + EA++ M +K +D + ++ AL + G+LD+ +EIV G+ G
Sbjct: 441 LWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHG 496
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 149/376 (39%), Gaps = 92/376 (24%)
Query: 5 GFVADPVVYSY--LMLGFVRDGD-SDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
G +P +YSY +M G ++G SD R+ L + G++ D V Y +L+ GY KG
Sbjct: 354 GIGIEPDIYSYNIVMDGLCKNGMLSDA--RMLMGLMIR-NGILPDTVTYSTLLHGYCSKG 410
Query: 62 MEEEAMECYNEAVGENSSV--------------------------KMS-------AVANN 88
EA +E + N S KM+ V N
Sbjct: 411 KVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCN 470
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPP------------------KRLAVNLGSFNVM 130
+++ALCNNG+ D+A+++ + M + K+ +L +++ +
Sbjct: 471 IIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTI 530
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA------------ 178
G C GR DA + F +M PD+ ++ I C+ G ++ A
Sbjct: 531 ISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGC 590
Query: 179 --------------------EELYG---EMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
ELYG EM +KGV+PD TY +++ E R++D +
Sbjct: 591 NKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPS 650
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSD 275
+M+ G+ PN++ + L+ + + F+I + +A Y M L
Sbjct: 651 VLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLV 710
Query: 276 GGKLDEILEIVGGILD 291
GGK+ E E+ LD
Sbjct: 711 GGKVAEAKELFETALD 726
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 12/250 (4%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
+Y L+K + E Y + V + V A N ++ LC++G ++A +LFD
Sbjct: 114 LYNVLLKSCIRENRVELVSWLYKDMVL--ARVSPEAYTFNLLIGLLCDSGHLEDARELFD 171
Query: 109 RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
+M P + N +F ++ GYC G +E+ +M P+ + +N LI
Sbjct: 172 KM-----PARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISS 226
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM-VDSGL-- 225
CK G +AE+L +M + G+ P T+ + A ++ + + FR M +D L
Sbjct: 227 FCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGL 286
Query: 226 -RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK-MDDASYKFMMKALSDGGKLDEIL 283
PN+ Y ++ + GML+EAK+ D M + ++ SY + L GKL E
Sbjct: 287 PHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAW 346
Query: 284 EIVGGILDDG 293
++ +L G
Sbjct: 347 IVLKEMLGIG 356
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 3/167 (1%)
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
+++ L +G F++A+ F +++ P K+ ++ L +NV+ + R + +++
Sbjct: 80 NLVTVLAKSGFFNKAISHFKSLRSNF-PEKQPSIYL--YNVLLKSCIRENRVELVSWLYK 136
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
M R SP+ +FN LI LC +G L +A EL+ +M +G P+E+T+G+L+
Sbjct: 137 DMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAG 196
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
G +M G+ PN +YN L+ + G +A+ D M
Sbjct: 197 LASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKM 243
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 14/226 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D +Y + F R+G F++ ++++++ G Y SL+ G
Sbjct: 550 MMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKR--GCNKTLQTYNSLILGL--- 604
Query: 61 GMEEEAMECYNEAVGE--NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G + + E Y + E V N +L+ LC G+ ++A + D M K
Sbjct: 605 GSKNQIFELYG-LIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQ-----K 658
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ N+ SF ++ +C FK + EVF ++ C + + ++L G +AEA
Sbjct: 659 GISPNISSFRILIKAFCKACDFKASHEVF-EIALNVCGHKEALYTLMFNELLVGGKVAEA 717
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+EL+ D+ + + Y L+D + +++ + +++D G
Sbjct: 718 KELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKG 763
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 149/320 (46%), Gaps = 10/320 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGG-VVSDGVVYGSLMKGYFMKGME 63
GF + V Y+ L+ G + G + ++R LKE L + + + + +L+ G+
Sbjct: 230 GFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENV 289
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A + E + +K + V NS+++ L NNGK DEA+ L+D+M P N
Sbjct: 290 LAAKNAFEEM--QRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKP-----N 342
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN + +G+C + K+A ++F + E P+ ++FN +ID CK GM+ E L+
Sbjct: 343 IVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHN 402
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M D+G+ P+ TY L+ V +M + L+ ++ YN L+G + G
Sbjct: 403 SMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDG 462
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+A+ M+ +K + +Y +M G L L++ + +G
Sbjct: 463 EPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYN 522
Query: 303 EFVKGELSKEGREEEVVKLM 322
+KG K G+ E+ +L+
Sbjct: 523 VLIKG-FCKTGKLEDANRLL 541
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 130/280 (46%), Gaps = 46/280 (16%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGM 62
+G + V Y+ L+ G +G D L++++ +G G+ + V + +L+ G+ K M
Sbjct: 302 QGLKPNIVTYNSLINGLSNNGKLDEAIALWDKM---VGLGLKPNIVTFNALINGFCKKKM 358
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+EA + +++ + E V +A+ N+++DA C G +E L + M +E P
Sbjct: 359 IKEARKLFDD-IAEQDLVP-NAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFP----- 411
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ ++N + G C + A ++ +M Y D +++N LI CK+G ++AE+L
Sbjct: 412 NVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLL 471
Query: 183 GEMSDKGVNPDEYTYGLLMDA-CFEVN--------------------------------- 208
GEM + GV P+ TY LMD C E N
Sbjct: 472 GEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKT 531
Query: 209 -RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+++D +M++ GL PN Y+ + ++++ G + +
Sbjct: 532 GKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPD 571
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 117/283 (41%), Gaps = 59/283 (20%)
Query: 90 VLDALCNNGKFDEALKLFDRM-KNEHNPPK-----------RLAVNLGSFNVMADGYCGQ 137
VL L N+ K+ + D++ KNE + R N +++ Y
Sbjct: 84 VLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTN 143
Query: 138 GRFKDAIEVFRKMGEY-----------------------------------RCSPDTLSF 162
A EVFR++ +Y R P+ +F
Sbjct: 144 LEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTF 203
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY-----F 217
N I+ LCK G L +AE++ ++ G +P+ TY L+D + G Y
Sbjct: 204 NIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDG--HCKKGSAGKMYRADAIL 261
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDG 276
++M+ + + PN +N L+ + + AK+ F+ M ++ LK + +Y ++ LS+
Sbjct: 262 KEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNN 321
Query: 277 GKLDEIL----EIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
GKLDE + ++VG L + F+ + F K ++ KE R+
Sbjct: 322 GKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARK 364
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + Y+ L+ G R+ + +L E++ + +D V Y L+ G+
Sbjct: 404 MLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENY--ELKADVVTYNILIGGWCKD 461
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + E + N VK + V N+++D C G ALK+ +M+ E KR
Sbjct: 462 GEPSKAEKLLGEML--NVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEG---KR- 515
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE- 179
N+ ++NV+ G+C G+ +DA + +M E +P+ +++ + ++ + G + + E
Sbjct: 516 -ANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIEG 574
Query: 180 ELY 182
LY
Sbjct: 575 HLY 577
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 141/285 (49%), Gaps = 14/285 (4%)
Query: 4 KGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
KGF P VY+Y ++ G + G + +F E+ G+ D Y SL+ KG
Sbjct: 289 KGF--SPGVYTYNTVINGLCKHGKYERAKEVFAEMLR--SGLSPDSTTYRSLLMEACKKG 344
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E +++ + V V +S++ +G D+AL F+ +K P +
Sbjct: 345 DAVETENIFSDM--RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 402
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+ ++ GYC +G +A+ + +M + C+ D +++N ++ LCK ML EA++L
Sbjct: 403 -----YTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 457
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ EM+++G+ PD YT +L+D ++ + + F+KM + ++ ++ YN L+ +
Sbjct: 458 FNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGK 517
Query: 242 VGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
VG +D AK + D++ K++ S+ ++ AL G L E +
Sbjct: 518 VGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRV 562
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 122/257 (47%), Gaps = 11/257 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D + L+ G + G+ LF+++KEK + D V Y +L+ G+ G
Sbjct: 464 RGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEK--RIKLDVVTYNTLLDGFGKVGDI 521
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A E + + V + + + ++ + +++ALC+ G EA +++D M ++ P + N
Sbjct: 522 DTAKEIWADMVSK--EILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICN 579
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
M GYC G D KM PD +S+N LI K +++A L
Sbjct: 580 -----SMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVK 634
Query: 184 EMSDK--GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+M +K G+ PD +TY ++ N++ + RKM++ G+ P+ + Y L+ V
Sbjct: 635 KMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVS 694
Query: 242 VGMLDEAKSFFDIMVKK 258
L EA F D M+++
Sbjct: 695 QDNLTEAFRFHDEMLQR 711
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 106/252 (42%), Gaps = 44/252 (17%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
V D V +S +M F R G+ D F +KE G++ D V+Y L++GY KGM EA
Sbjct: 362 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE--AGLIPDNVIYTILIQGYCRKGMISEA 419
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
M N +L C A+++ +
Sbjct: 420 MN-----------------LRNEMLQQGC-------------------------AMDVVT 437
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + G C + +A ++F +M E PD+ + LID CK G L A EL+ +M
Sbjct: 438 YNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMK 497
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+K + D TY L+D +V +D + MV + P ++ LV L G L
Sbjct: 498 EKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLS 557
Query: 247 EAKSFFDIMVKK 258
EA +D M+ K
Sbjct: 558 EAFRVWDEMISK 569
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 149/329 (45%), Gaps = 11/329 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG+ + L+ VR G + +R+++E+ GV V ++M K +
Sbjct: 184 KGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGV---NVYTLNIMVNALCKDGK 240
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E + + V E V V N+++ A + G +EA +L M P K +
Sbjct: 241 MEKVGTFLSEVQEKG-VYPDIVTYNTLISAYSSQGLMEEAFELMHAM-----PSKGFSPG 294
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + +G C G+++ A EVF +M SPD+ ++ +L+ + CK G E E ++
Sbjct: 295 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFS 354
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M + V PD + +M +D YF + ++GL P+ +Y L+ + G
Sbjct: 355 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 414
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
M+ EA + + M+++ MD +Y ++ L L E ++ + + G S L
Sbjct: 415 MISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLT 474
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAE 331
+ G K G + ++L +K + ++ +
Sbjct: 475 ILIDGH-CKLGNLQNAMELFKKMKEKRIK 502
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y+ L+ GF + GD D ++ ++ K ++ + + L+ KG EA
Sbjct: 504 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSK--EILPTPISFSILVNALCSKGHLSEAFR 561
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN----- 123
++E + + S+K + + NS++ C +G + ++M +E P ++ N
Sbjct: 562 VWDEMISK--SIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYG 619
Query: 124 ---------------------------LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
+ ++N + G+C + + K+A V RKM E +
Sbjct: 620 FVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVN 679
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
PD ++ +LI+ L EA + EM +G +PD+
Sbjct: 680 PDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GFV D + Y+ L+ GFV++ + F L ++++EK GG+V D Y S++ G+ +
Sbjct: 601 MISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRE 660
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
+EA + + + S S+++ + EA + D M P
Sbjct: 661 NQMKEAEAVLRKMIERGVNPDRSTYT--SLINGFVSQDNLTEAFRFHDEMLQRGFSP 715
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 155/315 (49%), Gaps = 13/315 (4%)
Query: 12 VYSY-LMLGFV-RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMEC 69
V++Y +M+ ++ ++GD + LF ++KE G D V Y SL+ G+ G+ +E + C
Sbjct: 56 VFTYNIMIDYLCKEGDLEMARSLFTQMKE--AGFTPDIVTYNSLIDGHGKLGLLDECI-C 112
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
E + +++ + N++++ C + +A + MK P N+ +++
Sbjct: 113 IFEQM-KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKP-----NVVTYST 166
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
D +C +G ++AI+ F M +P+ ++ +LID CK G LAEA +L E+ G
Sbjct: 167 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 226
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ + TY L+D E R+ + FR M+++G+ PN Y LV ++ ++ AK
Sbjct: 227 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 286
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGE 308
M +K +K D Y ++ L + +L+E ++G I + GI + + +
Sbjct: 287 DILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI-KESGINTNAVIYTTLMDA 345
Query: 309 LSKEGREEEVVKLME 323
K G+ E + L+E
Sbjct: 346 YFKSGQATEALTLLE 360
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 119/254 (46%), Gaps = 8/254 (3%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
+ +K S N ++D LC G + A LF +MK P ++ ++N + DG+
Sbjct: 50 AGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTP-----DIVTYNSLIDGHGKL 104
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G + I +F +M + C PD +++N LI+ CK + +A E EM G+ P+ TY
Sbjct: 105 GLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTY 164
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMV 256
+DA + + + +F M L PN Y L+ + G L EA K +I+
Sbjct: 165 STFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQ 224
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
+K++ +Y ++ L + G++ E E+ +L+ G E V G + + +E
Sbjct: 225 AGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFI--KAKEM 282
Query: 317 EVVKLMEKKEREKA 330
E K + K+ +EK
Sbjct: 283 EYAKDILKEMKEKC 296
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 144/305 (47%), Gaps = 17/305 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D V Y+ L+ G + G D +FE++K+ D + Y +L+ +
Sbjct: 86 GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD--ADCDPDVITYNALINCFCKFERMP 143
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E +E + + +K + V ++ +DA C G EA+K F M+ P N
Sbjct: 144 KAFEFLHEM--KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTP-----NE 196
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + D C G +A+++ ++ + + +++ L+D LC+ G + EAEE++
Sbjct: 197 FTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRA 256
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + GV P++ TY L+ + ++ ++M + ++P+L +Y ++ L
Sbjct: 257 MLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESR 316
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGK-------LDEILEIVGGILDDGGIE 296
L+EAK +I + + Y +M A G+ L+E+L++V G+ + E
Sbjct: 317 LEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFE 376
Query: 297 FSEEL 301
+++L
Sbjct: 377 VAKKL 381
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 126/285 (44%), Gaps = 28/285 (9%)
Query: 5 GFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
G + V Y+ L+ G +G +++ VFR GV + Y +L+ G+
Sbjct: 226 GIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN-----AGVAPNQETYTALVHGFIKAK 280
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E A + E + +K + ++L LCN + +EA L +K +
Sbjct: 281 EMEYAKDILKEM--KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESG-----IN 333
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N + + D Y G+ +A+ + +M +L+D LCKN A++L
Sbjct: 334 TNAVIYTTLMDAYFKSGQATEALTLLEEML------------DLVDGLCKNNCFEVAKKL 381
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ EM DKG+ PD+ Y L+D + + + +M++ G+ +L Y L+ L
Sbjct: 382 FDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSH 441
Query: 242 VGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEI 285
G + +A++ D M+ K + D+ Y ++K GK+DE LE+
Sbjct: 442 SGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL 486
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 21/227 (9%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K D ++Y ++ G + + L E+KE G+ ++ V+Y +LM YF G
Sbjct: 295 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKE--SGINTNAVIYTTLMDAYFKSGQA 352
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA+ E + ++D LC N F+ A KLFD M ++ P ++A
Sbjct: 353 TEALTLLEEML--------------DLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIA-- 396
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + DG G ++A+ + +M E D ++ LI L +G + +A L
Sbjct: 397 ---YTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLD 453
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
EM KGV PDE Y L+ + + +VD+ +M G+ L+
Sbjct: 454 EMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLS 500
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 21/258 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + Y+ L+ GF++ + + + +E+KEK + D ++YG+++ G +
Sbjct: 257 MLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC--IKPDLLLYGTILWGLCNE 314
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA E + S + +AV +++DA +G+ EAL L + M +
Sbjct: 315 SRLEEAKLLIGEI--KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD-------- 364
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ DG C F+ A ++F +M + PD +++ LID K+G L EA
Sbjct: 365 ---------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALN 415
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M + G+ D + Y L+ +V +M+ G+ P+ VY L+ K
Sbjct: 416 LRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYY 475
Query: 241 QVGMLDEAKSFFDIMVKK 258
+G +DEA + M K+
Sbjct: 476 ALGKVDEALELQNEMAKR 493
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 42/254 (16%)
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
+EA + F +M+ PK S N + GR + + F+ MG
Sbjct: 2 LEEASECFLKMRKFRVFPKP-----RSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSV 56
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
++N +ID LCK G L A L+ +M + G PD TY L+D ++ +D+ F +
Sbjct: 57 FTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQ 116
Query: 220 MVDS-----------------------------------GLRPNLAVYNRLVGKLVQVGM 244
M D+ GL+PN+ Y+ + + GM
Sbjct: 117 MKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 176
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L EA FF D+ L ++ +Y ++ A G L E L++V IL GI+ +
Sbjct: 177 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEIL-QAGIKLNVVTYT 235
Query: 304 FVKGELSKEGREEE 317
+ L +EGR +E
Sbjct: 236 ALLDGLCEEGRMKE 249
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
ML EA E + +M V P + L+ +V R D +F+ M +G++ ++ YN
Sbjct: 1 MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
++ L + G L+ A+S F M + D +Y ++ G LDE + I
Sbjct: 61 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICI 113
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
+ +++ L+ R+GD F + +E+K + V Y +L+ G G +EA+E
Sbjct: 189 NTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSY-PNLVTYSTLIGGLCENGKLKEAIE 247
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ E V +++ + A+ N +++ C GK D A + + MK+ P N+ +++
Sbjct: 248 FFEEMVSKDNILP-DALTYNILINGFCQRGKVDRARTILEFMKSNGCSP-----NVFNYS 301
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
V+ +GYC +GR ++A EVF ++ PDT+S+ LI+ LC+ G + EA EL +M DK
Sbjct: 302 VLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDK 361
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D T+ +++ R D+ +K+ G N Y ++ L Q G L +A
Sbjct: 362 DCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKA 421
Query: 249 KSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+M+ + A+ ++ L + G + + +E + G+L+ G
Sbjct: 422 TELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMG 467
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 44/233 (18%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
+ D + Y+ L+ GF + G D + E +K G + Y LM GY +G +
Sbjct: 257 NILPDALTYNILINGFCQRGKVDRARTILEFMKS--NGCSPNVFNYSVLMNGYCKEGRLQ 314
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA E +NE ++ +K ++ ++++ LC G+ DEA +L +MK+ K +
Sbjct: 315 EAKEVFNEI--KSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKD-----KDCRADT 367
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKM---------GEYRCS------------------- 156
+FNVM G C +GRF +A+++ +K+ G YR
Sbjct: 368 VTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGL 427
Query: 157 -------PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
P + N L+ LC NGM+ +A E + + G P+ ++ L+D
Sbjct: 428 MLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVD 480
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 47/210 (22%)
Query: 157 PDTLSFNNLIDQ------------------------------------LCKNGMLAEAEE 180
P+T FN L+ LC+NG L EA E
Sbjct: 188 PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIE 247
Query: 181 LYGEMSDK-GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ EM K + PD TY +L++ + +VD T M +G PN+ Y+ L+
Sbjct: 248 FFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGY 307
Query: 240 VQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD----GG 294
+ G L EAK F+ I +K D SY ++ L G++DE E++ + D
Sbjct: 308 CKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADT 367
Query: 295 IEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ F+ L G L +EGR +E + +++K
Sbjct: 368 VTFNVML-----GGLCREGRFDEALDMVQK 392
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 87/217 (40%), Gaps = 46/217 (21%)
Query: 2 FVKGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
F+K P V++Y LM G+ ++G +F E+K G+ D + Y +L+
Sbjct: 287 FMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSL--GMKPDTISYTTLINCLCR 344
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G +EA E + ++ + V N +L LC G+FDEAL + ++ P +
Sbjct: 345 TGRVDEATELLQQM--KDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKL-----PFEG 397
Query: 120 LAVNLGSFNVMAD---------------------GY--------------CGQGRFKDAI 144
+N GS+ ++ + G+ C G KDA+
Sbjct: 398 FYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAV 457
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
E + E P+ S+ L+D +C+ + EL
Sbjct: 458 ESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFEL 494
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 158/370 (42%), Gaps = 52/370 (14%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V ++ ++ ++G + E++ E+ G+ D + Y +L+ Y G
Sbjct: 378 KGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEE--GLAPDVITYNTLIDAYCKAGNV 435
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR---- 119
+A +E VG+ +KM N+VL LC ++++A +L H+PP+R
Sbjct: 436 AKAFTLMDEMVGKG--LKMDTFTLNTVLYNLCKMKRYEDAEELL------HSPPQRGFVP 487
Query: 120 --------------------------------LAVNLGSFNVMADGYCGQGRFKDAIEVF 147
L ++ ++N + G C R K+AI+
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
++ E PD ++N +I CK G L A + +M + PD T LM+
Sbjct: 548 NELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASY 266
++D F V+ G + ++ YN L+ + +VG +D A FFD M VK L+ D +Y
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
++ ALS+ G+ +E ++ + D G + Q F L +E VK E K
Sbjct: 668 NVVLSALSEAGRSEEAHNMLHKLADSGKLS-----QSFACPLLKPSSADEADVKEHEGKP 722
Query: 327 REKAEAKARE 336
++ KA++
Sbjct: 723 EAESSEKAQD 732
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 137/308 (44%), Gaps = 48/308 (15%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GFV D V Y +M + ++ + + RL++++ E+ ++ Y +L+KG
Sbjct: 483 RGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIER--KLIPSISTYNTLIKGLCRMERL 540
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAV 122
+EA++ NE V E V N ++ A C G + A + ++M +N P
Sbjct: 541 KEAIDKLNELV-EKGLVP-DETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKP------ 592
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ + N + +G C G+ A+++F E D +++N LI +CK G + A +
Sbjct: 593 DVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFF 652
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG----------LRPN---- 228
+M KG+ PD +TY +++ A E R ++ K+ DSG L+P+
Sbjct: 653 DDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADE 712
Query: 229 ----------------------LAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDAS 265
L Y + L G L EAK+ D M++K + +D ++
Sbjct: 713 ADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSST 772
Query: 266 YKFMMKAL 273
Y +M+ L
Sbjct: 773 YITLMEGL 780
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 111/257 (43%), Gaps = 26/257 (10%)
Query: 80 VKMSAVANNSVLDALCNNGKF--DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
V+ S A N+VL AL + +L +F + RL N +FN++ +C +
Sbjct: 167 VRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIE-----LRLHPNHYTFNLLVHTHCSK 221
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G DA+ M + SPD +++N L++ C+ GML EA L M G+ P + TY
Sbjct: 222 GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTY 281
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-- 255
L+ A + + M G P+L YN L L Q G +DEA D M
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMER 341
Query: 256 --------VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
V + DA +K+ + SD +L E + D G++ + V
Sbjct: 342 LSTALPDVVTYNTLVDACFKW--RCSSDALRLLEEMR-------DKGVKPTLVTHNIVVK 392
Query: 308 ELSKEGREEEVVKLMEK 324
L KEG+ EE + +EK
Sbjct: 393 SLCKEGKLEEALGKLEK 409
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 129/316 (40%), Gaps = 79/316 (25%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GF D Y+ L +G + G D FRL +E+ E+L + D V Y +L+ F
Sbjct: 304 MTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEM-ERLSTALPDVVTYNTLVDACF-- 360
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
C ++A L+L + M++ K +
Sbjct: 361 -----KWRCSSDA------------------------------LRLLEEMRD-----KGV 380
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
L + N++ C +G+ ++A+ K+ E +PD +++N LID CK G +A+A
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFT 440
Query: 181 LYGEMSDKGVN-----------------------------------PDEYTYGLLMDACF 205
L EM KG+ PDE +YG +M A F
Sbjct: 441 LMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYF 500
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDA 264
+ + + +M++ L P+++ YN L+ L ++ L EA + +V+K L D+
Sbjct: 501 KEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDET 560
Query: 265 SYKFMMKALSDGGKLD 280
+Y ++ A G L+
Sbjct: 561 TYNIIIHAYCKEGDLE 576
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 107/223 (47%), Gaps = 9/223 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ D V Y +L+ + KGM EA A + + + N+++ A G
Sbjct: 238 GLSPDAVTYNTLLNAHCRKGMLGEARALL--ARMKRDGIAPTQPTYNTLVSAFARLGWIK 295
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-PDTL 160
+A K+ + M P +L ++NV+A G C G+ +A + +M + PD +
Sbjct: 296 QATKVVESMTAYGFEP-----DLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVV 350
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N L+D K ++A L EM DKGV P T+ +++ + + ++++ K+
Sbjct: 351 TYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKI 410
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMD 262
+ GL P++ YN L+ + G + +A + D MV K LKMD
Sbjct: 411 AEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 138/276 (50%), Gaps = 13/276 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF D V Y L+ G + G++ V RL +L+ V D V+Y +++ +
Sbjct: 157 QGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGH--SVKPDVVMYNTIINSLCKNKLL 214
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + Y+E + + + V +++ C GK EA L + MK K + +
Sbjct: 215 GDACDVYSEMIVK--GISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKL-----KNINPD 267
Query: 124 LGSFNVMADGYCGQGRFK---DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +F+V+ D +G+ K +A+ +F +M PD +++N+LID LCKN L A
Sbjct: 268 VYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIA 327
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM + G+ PD Y+Y +L+D + R++ +F+ ++ G N+ YN ++ L
Sbjct: 328 LLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLC 387
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSD 275
+ G+ EA M K M +A +++ ++ ALS+
Sbjct: 388 KAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSE 423
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 12/228 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG D V Y+ L+ GF G F L E+K L + D + L+ +
Sbjct: 224 MIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMK--LKNINPDVYTFSVLIDALGKE 281
Query: 61 G---MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G M +EAM + E +N + V NS++D LC N + A+ L MK EH
Sbjct: 282 GKKKMVDEAMSLFEEMKHKNMIPDI--VTYNSLIDGLCKNHHLERAIALLKEMK-EHG-- 336
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+ ++ S+ ++ DG C GR + A E F+ + C + +N +I+ LCK G+ E
Sbjct: 337 --IQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGE 394
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
A +L +M KG P+ T+ ++ A E + D R+M+ GL
Sbjct: 395 AMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N++L +L N ++ + LF + + P + +L + +++ + +C Q A VF
Sbjct: 62 NNILSSLVKNKRYPTVISLFKQFE-----PNGITPDLCTLSILINCFCHQAHITLAFSVF 116
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ + PD ++ N LI LC G + + + ++ +G D+ +YG L++ +
Sbjct: 117 ANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKA 176
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML-DEAKSFFDIMVKKLKMDDASY 266
A RK+ ++P++ +YN ++ L + +L D + +++VK + D +Y
Sbjct: 177 GETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTY 236
Query: 267 KFMMKALSDGGKLDEILEIV 286
++ GK+ E ++
Sbjct: 237 TTLIHGFCIMGKMKEAFSLL 256
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
A+ F M R P T FNN++ L KN L+ + G+ PD T +L
Sbjct: 40 HHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSIL 99
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-L 259
++ + + F ++ G P+ N L+ L G + + F D +V +
Sbjct: 100 INCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGF 159
Query: 260 KMDDASYKFMMKALSDGG 277
++D SY ++ L G
Sbjct: 160 QLDQVSYGTLINGLCKAG 177
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 157/352 (44%), Gaps = 38/352 (10%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+LG R+ D + +F + +K G + V Y +L+ G G
Sbjct: 224 GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQK--GCQRNEVSYTNLIHGLCEAGRIN 281
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLD-ALCNNGKFDEALKLFDRMKNEHNPP------ 117
EA++ + + +N V +VL AL +G+ EAL LF+ MK + P
Sbjct: 282 EALKLFADMTEDNCC---PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYT 338
Query: 118 ------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
K L ++ ++N + DGYC +G DA E+ M
Sbjct: 339 VLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESN 398
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
C P+T ++N LI LCK + +A L +M ++ ++P TY L+ +VN ++
Sbjct: 399 SCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESA 458
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKA 272
M ++GL P+ Y+ + L + G ++EA + FD + K +K ++ Y ++
Sbjct: 459 YRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDG 518
Query: 273 LSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
GK+D ++ +L+D + S ++G L KE + +E L+ K
Sbjct: 519 YCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG-LCKEKKMKEASSLVAK 569
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 148/328 (45%), Gaps = 52/328 (15%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+P V++Y +L G ++ D ++ E+ EK G++ V Y +L+ GY +GM ++
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK--GLIPSVVTYNALIDGYCKEGMIDD 387
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A E + + E++S + N ++ LC K +A+ L ++M ++L+ +L
Sbjct: 388 AFEILD--LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE-----RKLSPSLI 440
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + G C + A + M E PD +++ ID LCK G + EA L+ +
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV 500
Query: 186 SDKGVN-----------------------------------PDEYTYGLLMDACFEVNRV 210
KGV P+ YTY +L++ + ++
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+ ++ KM+ G++P + Y L+G++++ G D A F+ MV + D +Y
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620
Query: 270 MKALSDGGKLDEILEIVG-----GILDD 292
+ A G L+E+ +++ GIL D
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPD 648
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 9/246 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ Y+ L+ G + D + +RL + E G+V D Y + +G EEA +
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNE--NGLVPDQWTYSVFIDTLCKEGRVEEAGTLF 497
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + VK + V +++D C GK D A L +RM N+ P N ++NV+
Sbjct: 498 DSV--KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLP-----NSYTYNVL 550
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G C + + K+A + KM P +++ LI ++ K+G A +++ M G
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGY 610
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD TY + A F +++ KM + G+ P+L Y L+ ++G+ A
Sbjct: 611 QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFD 670
Query: 251 FFDIMV 256
F MV
Sbjct: 671 FLKCMV 676
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 12/231 (5%)
Query: 30 FRLFEELK----EKLGGVVSDGV-VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSA 84
F L +E+K E L +S + + +++ GY G EA E Y + + + +
Sbjct: 172 FLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA-ELYASKIVQ-AGLHPDT 229
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
S++ C N D A ++F M P K N S+ + G C GR +A+
Sbjct: 230 FTYTSLILGHCRNKGVDNAYEVFLIM-----PQKGCQRNEVSYTNLIHGLCEAGRINEAL 284
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
++F M E C P ++ LI L +G EA L+ EM +KG P+ +TY +L+D
Sbjct: 285 KLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+ N++D+ +M + GL P++ YN L+ + GM+D+A D+M
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 130/312 (41%), Gaps = 23/312 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V Y+ L+ ++DG D ++F + G D Y + + YF +
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL--GYQPDVCTYTAFLHAYFSQ 627
Query: 61 GMEEEAMECYNEAVGENSS--VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
GM EE ++ + + + + V ++D G A M + P
Sbjct: 628 GMLEEV----DDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683
Query: 119 RLAV-----NLGSFNVM--------ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
V NL N M D ++ A+++F KM E+ C+ D + L
Sbjct: 684 LYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGAL 743
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
I C+ L EA+ L M ++G++P E Y L+D C ++ + MV++GL
Sbjct: 744 IAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGL 803
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILE 284
P L Y LV L G ++AK+ F ++ D+ ++K ++ L +DE E
Sbjct: 804 LPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSE 863
Query: 285 IVGGILDDGGIE 296
++ I+++ G +
Sbjct: 864 LI-DIMEEKGCQ 874
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 16/230 (6%)
Query: 143 AIEVFRKM---GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+EVFRKM GE++ P +N ++ L K ++ E + +Y E+ + ++P+ YT+
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
+++ ++ V + Y K+V +GL P+ Y L+ + +D A F IM +K
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
+ ++ SY ++ L + G+++E L++ + +D + LS GR+ E
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYA-LSGSGRKVEA 318
Query: 319 VKLMEKKEREKAEAK-----------AREAEAAEAAKRSARAAIASLIPS 357
+ L + + + E +E + EA K + + LIPS
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPS 368
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 112/273 (41%), Gaps = 42/273 (15%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC------------ 135
N++L +L DE ++ + N P N+ +FN M +GYC
Sbjct: 163 NTILMSLSKFLLIDEMKTVYLELLNNQISP-----NIYTFNAMVNGYCKIGNVVEAELYA 217
Query: 136 --------------------GQGRFK---DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
G R K +A EVF M + C + +S+ NLI LC+
Sbjct: 218 SKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEA 277
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
G + EA +L+ +M++ P TY +L+ A R + F +M + G PN+ Y
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTY 337
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
L+ L + +DEA+ M +K L +Y ++ G +D+ EI+ +
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397
Query: 292 DGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ + E + G L K+ + + + L+ K
Sbjct: 398 NSCGPNTRTYNELICG-LCKKRKVHKAMALLNK 429
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 58/287 (20%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G+ D Y+ + + G + V + ++ E+ G++ D V Y L+ GY
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE--GILPDLVTYTVLIDGYARL 662
Query: 61 GMEEEA---MECYNEAVGENSSVKMSAVANNSV-------------LDALCNNGKFDEAL 104
G+ A ++C + + S +S + N +D++ N +++ AL
Sbjct: 663 GLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIAL 722
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
KLF++M EH +++ + + G+C Q R ++A + M E SP +N+
Sbjct: 723 KLFEKMV-EHG----CTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNS 777
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNP-------------------------------- 192
L+D CK G+ AEA L M + G+ P
Sbjct: 778 LLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCG 837
Query: 193 ---DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
DE + +L+D + + VD+ + M + G +PN Y+ L+
Sbjct: 838 YNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLI 884
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 30 FRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNS 89
+LFE++ E G D +YG+L+ G+ + EEA + + + S NS
Sbjct: 722 LKLFEKMVEH--GCTIDVSIYGALIAGFCQQERLEEAQGLVHHM--KERGMSPSEDIYNS 777
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+LD C G + EA++L D M P L S+ ++ G +G + A VF
Sbjct: 778 LLDCCCKLGVYAEAVRLVDAMVENGLLPL-----LESYKLLVCGLYIEGSNEKAKAVFHG 832
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
+ + D +++ LID L K ++ E EL M +KG P+ TY LL++
Sbjct: 833 LLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIE 885
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 146/323 (45%), Gaps = 17/323 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G A + Y+ ++ G+ R G+ D R+ + + D Y L++ ++G
Sbjct: 123 GPSATIITYNTMVNGYCRAGNIDAARRMIDSVP-----FAPDTFTYNPLIRALCVRGCVL 177
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ +++ + S S V + +LDA C + +A+ L D M+++ P ++
Sbjct: 178 DALAVFDDMLHRGCSP--SVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEP-----DI 230
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++NV+ + C QG +A++V + Y C PD +++ ++ LC + EA++L +
Sbjct: 231 VTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTK 290
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M PDE T+ ++ + + V +M + G P++ Y+ ++ L +
Sbjct: 291 MFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERR 350
Query: 245 LDEAKSFF-----DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+DEA +++ K D ++ ++ +L G D +++V + + G I
Sbjct: 351 VDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDIT 410
Query: 300 ELQEFVKGELSKEGREEEVVKLM 322
V G L K + EE + L+
Sbjct: 411 TYNCIVDGFLCKSCKTEEALDLL 433
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 140/327 (42%), Gaps = 44/327 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V Y+ L+ GD ++ L G D V Y ++K
Sbjct: 221 MRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSY--GCKPDAVTYTPVLKSLCSS 278
Query: 61 GMEEEAME------------------------CYNEAVGENSSV--KMS-------AVAN 87
EEA + C VG + V +MS +
Sbjct: 279 ERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITY 338
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+S++D LC + DEA+KL + E K + +FN + C +G F AI+V
Sbjct: 339 SSIMDGLCKERRVDEAIKLLKELLAEMVS-KNCIPDQVTFNTIITSLCQKGLFDRAIKVV 397
Query: 148 RKMGEYRCSPDTLSFNNLIDQ-LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
+M E+ C PD ++N ++D LCK+ EA +L M G+ PD TY L F
Sbjct: 398 DEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLA---FG 454
Query: 207 VNRVDD---GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM-D 262
++R D+ FR++ GL P+ +YN ++ L + D A FF MV M D
Sbjct: 455 LSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPD 514
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGI 289
+++Y +++ ++ G L+E E++G +
Sbjct: 515 ESTYIILVEGIAYEGFLEEAKELLGNL 541
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 33/215 (15%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKL--GGVVSDGVVYGSLMKGYFMKG 61
G D + YS +M G ++ D +L +EL ++ + D V + +++ KG
Sbjct: 329 HGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKG 388
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP---- 117
+ + A++ +E + E+ + N V LC + K +EAL L + M + P
Sbjct: 389 LFDRAIKVVDE-MSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTT 447
Query: 118 -KRLAVNLGS-------------------------FNVMADGYCGQGRFKDAIEVFRKMG 151
K LA L +N + G C + R AI+ F M
Sbjct: 448 YKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMV 507
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
C PD ++ L++ + G L EA+EL G +S
Sbjct: 508 SNGCMPDESTYIILVEGIAYEGFLEEAKELLGNLS 542
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 93/250 (37%), Gaps = 43/250 (17%)
Query: 111 KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLC 170
K PPK A + G N G +G A+ + + P + N LI +LC
Sbjct: 48 KWTRTPPKPPARSGGGANRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLC 107
Query: 171 KNGMLAEAEEL------------YGEMSDKGVN-----------------PDEYTYGLLM 201
+G +A+AE + Y M + PD +TY L+
Sbjct: 108 ADGRVADAERVVEALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVPFAPDTFTYNPLI 167
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ-------VGMLDEAKSFFDI 254
A V D F M+ G P++ Y+ L+ + V +LDE +S
Sbjct: 168 RALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRS---- 223
Query: 255 MVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
K + D +Y ++ A+ G + E L+++ + G + +K S E R
Sbjct: 224 --KGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSE-R 280
Query: 315 EEEVVKLMEK 324
EE KL+ K
Sbjct: 281 WEEADKLLTK 290
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F + G+ +F+ + + G+ V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHNFCKGGEIXLAQSVFDSITK--WGLRPSVVSFNTLMNGYIKIGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++V + S V+ + +++ LC K D+A LFD M + P N
Sbjct: 189 EGFRL--KSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++R+M PD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYRQMLSQ--SLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G PN+
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVVT 418
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 105/263 (39%), Gaps = 49/263 (18%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFR--KMGEYRCSPDTLS-------------------- 161
+ F+ + Y G +DAIE +R K ++R DT
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYE 125
Query: 162 -------------FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
FN L+ CK G + A+ ++ ++ G+ P ++ LM+ ++
Sbjct: 126 ESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIG 185
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
+D+G M SG++P++ Y+ L+ L + +D+A + FD M+ L + ++
Sbjct: 186 DLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFT 245
Query: 268 FMMKALSDGGKLDEILEIVGGIL 290
++ G++D +EI +L
Sbjct: 246 TLIDGHCKNGRVDLAMEIYRQML 268
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + G+ V + +LM GY G
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A LFD M + K L N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLD-----KGLVPNG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ +K G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDK--GLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 104/263 (39%), Gaps = 49/263 (18%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFR--KMGEYRCSPDTLS-------------------- 161
+ F+ + Y G +DAIE +R K ++R DT
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 162 -------------FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
FN L+ K G + A+ ++ ++ G+ P ++ LM+ ++
Sbjct: 126 ENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
+++G M SG++P++ Y+ L+ L + +D+A FD M+ K L + ++
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFT 245
Query: 268 FMMKALSDGGKLDEILEIVGGIL 290
++ G++D +EI +L
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQML 268
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 136/279 (48%), Gaps = 10/279 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF + VVY+ L+ G+ + G+ R+ ++ K G+ + V S+++G+ G
Sbjct: 345 KGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSK--GINPNSVTLNSIIQGFCKIGQM 402
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A E + S+ A +++ LC N +F+ AL+ M + P N
Sbjct: 403 EQAECILEEMLSRGFSINPGAFT--TIIHWLCMNSRFESALRFLREMLLRNMRP-----N 455
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
G + G C +G+ DA+E++ ++ E + ++ N LI LCK G + EA L
Sbjct: 456 DGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLK 515
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M ++G D+ TY L+ C + +V++G +MV G+ P+ YN L+ + ++G
Sbjct: 516 KMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIG 575
Query: 244 MLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDE 281
LDEA + ++ + L + +Y M+ K++E
Sbjct: 576 KLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 614
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 10/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ L+ G R G D L+ E K + +V + YG ++ GY
Sbjct: 552 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR--DLVPNVYTYGVMIDGYCKA 609
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EE + + E + +N +++++V N+++ A C NG EA KL D M+++ PP
Sbjct: 610 DKIEEGEKLFTELLTQN--LELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTT- 666
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ + G C GR +DA + +M + P+ + + LI CK G + +
Sbjct: 667 ----ATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVN 722
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EMS ++P++ TY +++D + + A +MV G+ P+ YN L
Sbjct: 723 VLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 782
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
+ G ++E D M ++ L +D+ +Y ++ L
Sbjct: 783 KEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSAL 822
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 137/282 (48%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF +P ++ ++ + + R E+ + +DG++ +L+ G +
Sbjct: 412 MLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR-NMRPNDGLL-TTLVGGLCKE 469
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A+E + + + + V N+++ LC G EA++L +M +
Sbjct: 470 GKHSDAVELWFRLLEKGFGANL--VTTNALIHGLCKTGNMQEAVRLLKKMLE-----RGF 522
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N + G C +G+ ++ ++ +M + PDT ++N LI +C+ G L EA
Sbjct: 523 VLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVN 582
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ E + + P+ YTYG+++D + +++++G F +++ L N VYN L+
Sbjct: 583 LWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYC 642
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ G EA D M K + A+Y ++ + + G++++
Sbjct: 643 RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMED 684
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 150/322 (46%), Gaps = 12/322 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG ++L+ V+ + + + +FE +++ GV D ++ + + + G
Sbjct: 206 KGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ---GVSPDVYLFSTAINAFCKGGKV 262
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A++ + + E V + V N+++ LC +G DEA + ++M + +
Sbjct: 263 EDAIQLFFDM--EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG-----VNAT 315
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +++V+ +G +F +A V ++ E +P+ + +N LID CK G L +A + G
Sbjct: 316 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 375
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M KG+NP+ T ++ ++ +++ +M+ G N + ++ L
Sbjct: 376 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS 435
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+ A F +++++ ++ +D ++ L GK + +E+ +L+ G
Sbjct: 436 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 495
Query: 303 EFVKGELSKEGREEEVVKLMEK 324
+ G L K G +E V+L++K
Sbjct: 496 ALIHG-LCKTGNMQEAVRLLKK 516
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 147/281 (52%), Gaps = 10/281 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y L+ G + G D +RLFE++ + G ++ VVY SL++ +F+ G +
Sbjct: 452 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLD--AGHNANPVVYTSLIRNFFIHGRK 509
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+ + + E + ++ + N+ +D + G+ ++ +F+ +++ P +
Sbjct: 510 EDGHKIFKELIRRGCKPDLTLL--NTYMDCVFKAGEVEKGRMIFEDIRSYGFLP-----D 562
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S++++ G G+ ++ +F M + + D ++N ++D CK+G + +A E+
Sbjct: 563 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILE 622
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +K V P TYG ++D +++R+D+ F + G+ N+ +Y+ L+ +VG
Sbjct: 623 EMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 682
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
+DEA + M+KK L + ++ ++ AL +++E L
Sbjct: 683 RIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 723
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 43/291 (14%)
Query: 3 VKGFVADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
VKG +P V+Y+ + F + G+ D ++ F ELK + G+ D V Y S++
Sbjct: 240 VKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQ--GLKPDDVSYTSMIWVLCKA 297
Query: 61 GMEEEAMECYNEAVGENS----------------------SVKM-----------SAVAN 87
G EA E + + E S + K+ S V+
Sbjct: 298 GRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSF 357
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
NS+L L K DEAL LF+ MK + P N ++N++ D C GR ++A +
Sbjct: 358 NSILTCLGKKRKVDEALSLFEVMKKDAEP------NSSTYNIIIDMLCLGGRVEEAYRIL 411
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M P+ L+ N ++D+LCK L EA +++ S +G NPD TY L+D +
Sbjct: 412 DEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKK 471
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+VD+ F KM+D+G N VY L+ G ++ F ++++
Sbjct: 472 GQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 522
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 135/282 (47%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF+ D YS L+ G + G + +F +K++ G D Y +++ G+ G
Sbjct: 558 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ--GFALDARAYNAVVDGFCKSGKVH 615
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E E + V+ + +++D L + DEA LF+ K+ K + +N+
Sbjct: 616 KAYEILEEM--KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS-----KGIELNV 668
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG+ GR +A + +M + +P+ ++N+L+D L K + EA +
Sbjct: 669 VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 728
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + P+ YTY +L++ V + + +++ M GL PN+ Y ++ L +VG
Sbjct: 729 MKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGN 788
Query: 245 LDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI 285
+ +A S F+ + D AS+ +++ +S+ + E ++
Sbjct: 789 ITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQV 830
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 138/290 (47%), Gaps = 11/290 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF D Y+ ++ GF + G + + EE+KEK V YG+++ G
Sbjct: 592 QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC--VQPTVATYGAIVDGLAKIDRL 649
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + EA ++ ++++ V +S++D G+ DEA + + M K L N
Sbjct: 650 DEAYMLFEEA--KSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMK-----KGLTPN 702
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + D +A+ F+ M E +C P+T +++ LI+ LC+ +A +
Sbjct: 703 VYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 762
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M +G+ P+ TY ++ +V + D + F + +G P+ A +N L+ +
Sbjct: 763 DMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN 822
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
EA F + ++ +++ S ++ AL+ L++ IVG +L +
Sbjct: 823 RAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA-AIVGAVLRE 871
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ AL G+ +AL L D +K P ++ +NV D + G A + F
Sbjct: 218 TTLVRALAREGQVADALALVDEVKGSCLEP-----DIVLYNVCIDCFGKAGNVDMAWKFF 272
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
++ PD +S+ ++I LCK G L EAEEL+ +M + P Y Y ++
Sbjct: 273 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSA 332
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
R +D ++ + G P++ +N ++ L + +DEA S F++M K + + ++Y
Sbjct: 333 GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYN 392
Query: 268 FMMKALSDGGKLDEILEIV 286
++ L GG+++E I+
Sbjct: 393 IIIDMLCLGGRVEEAYRIL 411
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 2/201 (0%)
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ V+ R + A+E+ R+M E F L+ L + G +A+A L
Sbjct: 179 FSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVD 238
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + PD Y + +D + VD +F ++ GL+P+ Y ++ L + G
Sbjct: 239 EVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAG 298
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L EA+ F M + + A +Y M+ G+ ++ +++ + + G I
Sbjct: 299 RLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFN 358
Query: 303 EFVKGELSKEGREEEVVKLME 323
+ L K+ + +E + L E
Sbjct: 359 SILTC-LGKKRKVDEALSLFE 378
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 3/191 (1%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
R DA+ M + P ++ LI L + A EL +M + G + +
Sbjct: 159 RLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFT 218
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVK 257
L+ A +V D ++ S L P++ +YN + + G +D A FF ++ +
Sbjct: 219 TLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQ 278
Query: 258 KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
LK DD SY M+ L G+L E E+ + + + + + G GR E+
Sbjct: 279 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMG-YGSAGRFED 337
Query: 318 VVKLMEK-KER 327
KL+E+ +ER
Sbjct: 338 AYKLLERLRER 348
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 150/340 (44%), Gaps = 44/340 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSL----------- 53
G + VVYS L+ G+ + G + V ++F E+ EK G+ D V+Y L
Sbjct: 180 GIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEK--GIEPDVVMYTGLIDSLCKVGKAK 237
Query: 54 -----MKGYFMKGMEEEAMECYN-------------EAVG-----ENSSVKMSAVANNSV 90
M +G+E + YN EA+G V V N++
Sbjct: 238 KAHGVMDMMVRRGLEPNVVT-YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ L + + DEA+ L + M N K N+ +FN + G C GR + A +V M
Sbjct: 297 IKGLSDVLEMDEAMWLLEEMVRGKNIVKP---NVVTFNSVIQGLCDIGRMRQAFQVRAMM 353
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E C + +++N LI L + + +A EL EM+ G+ PD +TY +L+ ++ +V
Sbjct: 354 EETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQV 413
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM 270
D M D G+ P L Y L+ + + GM++ A++ F+ M +D +Y M+
Sbjct: 414 DRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMI 473
Query: 271 KALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVK 306
G L E++ I+D+G + +S + F K
Sbjct: 474 HGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAK 513
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 4/247 (1%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
AV+ N+VL ALC G D A L M E +P R N S+ V+ C A
Sbjct: 77 AVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACR--PNAVSYTVLMRALCADRLADQA 134
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ + R M D +++ LI LC + +A EL GEM + G+ P+ Y L+
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
+ R +D F +M + G+ P++ +Y L+ L +VG +A D+MV++ L+ +
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+Y ++ + G + E + ++ + + G +KG LS +E + L+
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKG-LSDVLEMDEAMWLL 313
Query: 323 EKKEREK 329
E+ R K
Sbjct: 314 EEMVRGK 320
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 140/317 (44%), Gaps = 48/317 (15%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ LM D +D L ++ GV +D V YG+L++G
Sbjct: 116 VSYTVLMRALCADRLADQAVGLLRSMRS--AGVRADVVTYGTLIRG-------------- 159
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
LC+ + D+A++L M P N+ ++ +
Sbjct: 160 -----------------------LCDAAEVDKAVELMGEMCESGIEP-----NVVVYSSL 191
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
GYC GR++D +VF +M E PD + + LID LCK G +A + M +G+
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ TY +L++ + V + +KM + G+ P++ YN L+ L V +DEA
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311
Query: 251 FFDIMVK---KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+ MV+ +K + ++ +++ L D G++ + + V ++++ G + + G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ-VRAMMEETGCMVNLVTYNLLIG 370
Query: 308 ELSKEGREEEVVKLMEK 324
L + + + ++LM++
Sbjct: 371 GLLRVHKVRKAMELMDE 387
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/379 (18%), Positives = 144/379 (37%), Gaps = 80/379 (21%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ L+ ++G + +++ EK GV D V Y +L+KG
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK--GVAPDVVTYNTLIKGLSDV 303
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE------------------ 102
+EAM E V + VK + V NSV+ LC+ G+ +
Sbjct: 304 LEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLV 363
Query: 103 -----------------ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
A++L D M + P +++++ G+C + A +
Sbjct: 364 TYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSF-----TYSILIKGFCKMWQVDRAED 418
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS------------------- 186
+ M + P+ + L+ +C+ GM+ A L+ EM
Sbjct: 419 LLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACK 478
Query: 187 ---------------DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
D+G+ PD TY ++++ + ++ ++M SG P++AV
Sbjct: 479 AGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAV 538
Query: 232 YNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKAL---SDGGKLDEILEIVG 287
++ L+ G +++ +++ K + +D + +L ++G L + L
Sbjct: 539 FDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFS 598
Query: 288 GILDDGGIEFSEELQEFVK 306
+ G I +EL + +
Sbjct: 599 AEISKGNINSPQELMKVLH 617
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMS---DKGVNPDEYTYGLLMDACFEVNRVDDGA 214
D +S+N ++ LC+ G A L MS P+ +Y +LM A D
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
R M +G+R ++ Y L+ L +D+A M + ++ + Y +++
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 274 SDGGKLDEI 282
G+ +++
Sbjct: 196 CKSGRWEDV 204
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 151/317 (47%), Gaps = 21/317 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG--M 62
G D V Y+ ++ GF ++GDSD + + E+ ++ G++ D V Y S++ KG M
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR--GILPDVVTYSSIIAA-LCKGQAM 247
Query: 63 EEEAMECYNEAVGENSS---------VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE 113
++ C V E+ VK + ++++D C GK DEA+KL M +
Sbjct: 248 DKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSV 307
Query: 114 HNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
P N +++ + +GYC R +DA+ +F++M SPD +++N ++ L +
Sbjct: 308 GLKP-----NTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTR 362
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
A A+ELY +++ G + TY +++ + DD F+ + L+ +N
Sbjct: 363 RTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFN 422
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
++ L++VG DEAK F L + +Y+ M + + G L+E+ ++ ++D
Sbjct: 423 IMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS-MED 481
Query: 293 GGIEFSEELQEFVKGEL 309
G + F+ EL
Sbjct: 482 NGCTVDSGMLNFIVREL 498
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 141/288 (48%), Gaps = 23/288 (7%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKE-KLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
P V+SY L+ G + S L + + + GG D V Y +++ G+F +G ++A
Sbjct: 156 PNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNN------------GKFDEALKLFDRMKNEH 114
Y+E + + + V +S++ ALC G+ E+ KLFD M
Sbjct: 216 YSTYHEML--DRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIG 273
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
P ++ +++ + DGYC G+ +A+++ M P+T++++ LI+ CK
Sbjct: 274 VKP-----DIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 328
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+ +A L+ EM GV+PD TY +++ F+ R + ++ +SG + L+ YN
Sbjct: 329 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 388
Query: 235 LVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
++ L + + D+A F ++ + LK++ ++ M+ AL G+ DE
Sbjct: 389 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 436
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 18/218 (8%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G C R DA++ V R+M E C P+ S+NNL++ LC EA EL
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHM 183
Query: 185 MSDK---GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M+D G PD +Y +++ F+ D + + +M+D G+ P++ Y+ ++ L +
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 243
Query: 242 VGMLD------------EAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGG 288
+D E++ FD+MV+ +K D +Y ++ GK+DE ++++ G
Sbjct: 244 GQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSG 303
Query: 289 ILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
++ G + + G K R E+ + L ++ E
Sbjct: 304 MVSVGLKPNTVTYSTLING-YCKISRMEDALVLFKEME 340
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 19/246 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDG-----VVYGSLMK 55
M G D + YS L+ G+ G D +L L G+VS G V Y +L+
Sbjct: 269 MVRIGVKPDIITYSTLIDGYCLAGKMDEAMKL-------LSGMVSVGLKPNTVTYSTLIN 321
Query: 56 GYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
GY E+A+ + E E+S V + N +L L + A +L+ R+
Sbjct: 322 GYCKISRMEDALVLFKEM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 379
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
+ L ++N++ G C DA+++F+ + + +FN +ID L K G
Sbjct: 380 -----QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 434
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
EA++L+ S G+ P+ +TY L+ + +++ F M D+G + + N +
Sbjct: 435 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 494
Query: 236 VGKLVQ 241
V +L+Q
Sbjct: 495 VRELLQ 500
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 176 AEAEELYGEMSDKG---VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
A A Y M+ G V PD TYG+L+ C R+D G ++ G R +
Sbjct: 66 AAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITF 125
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKKLK-----MDDASYKFMMKALSDGGKLDEILEIVG 287
L+ L +A DI+++++ + SY ++ L D + E LE++
Sbjct: 126 TPLLKGLCADKRTSDA---MDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLH 182
Query: 288 GILDDGG 294
+ DD G
Sbjct: 183 MMADDRG 189
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 33/315 (10%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V G + V Y+ L+ F R G+ + L E+++ + GV + V +++ G G
Sbjct: 239 VHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENE--GVPQNIVTLNTIVGGLCRAGR 296
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKRLA 121
A+E + E K +AV ++++ AL + A++LF ++M H+P +
Sbjct: 297 TGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMY 356
Query: 122 VNLGS-----------------------------FNVMADGYCGQGRFKDAIEVFRKMGE 152
+ S +N++ G+C + R +A E+ ++M E
Sbjct: 357 FTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKE 416
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
PD ++N L+ CK G A +EL G+M D G P T+G L+ +V ++D+
Sbjct: 417 VGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDE 476
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
R M +SG+ PN +YN L+ L + G +D A FD M +K + + ++ ++K
Sbjct: 477 ALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLK 536
Query: 272 ALSDGGKLDEILEIV 286
L D ++ E++
Sbjct: 537 GLRDKNMPEKAFELM 551
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 13/284 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D ++ ++ R D G+ R++ L + V D V YG L+ G G +A+
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYA-LMQGCASVRPDVVTYGILVNGLCKAGRVGDALR 193
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD-RMKNEHNPPKRLAVNLGSF 127
+ ++ ++ V N+V+D LC +G+ EAL + RM + H P N ++
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPP----NTVTY 249
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + D +C G A E+ KM + ++ N ++ LC+ G A E + E
Sbjct: 250 NCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--K 307
Query: 188 KGVNP----DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ V P + TY L+ A N V F + + G P+ +Y ++ L Q G
Sbjct: 308 RTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAG 367
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
L++A S M + K+D +Y ++ +L E E++
Sbjct: 368 RLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELL 411
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 136/320 (42%), Gaps = 13/320 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y L+ G + G R+ + + + + D V +++ G G +EA+
Sbjct: 171 DVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALA 230
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + + V N ++DA C G A +L ++M+NE P N+ + N
Sbjct: 231 FVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQ-----NIVTLN 285
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSP----DTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ G C GR A+E FR+ + P + ++++ L+ L + A EL+ E
Sbjct: 286 TIVGGLCRAGRTGAALEFFRE--KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHE 343
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+G +PD Y ++ + R++D + M ++G + + YN L+ +
Sbjct: 344 KMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKR 403
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L EA M + ++ D +Y ++ G + E++G ++DDG
Sbjct: 404 LHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGT 463
Query: 304 FVKGELSKEGREEEVVKLME 323
V G K G+ +E ++++
Sbjct: 464 LVHG-YCKVGKIDEALRILR 482
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 116/273 (42%), Gaps = 10/273 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V YS L+ + + LF E + G D ++Y +++ G G E+A C
Sbjct: 319 VTYSTLVGALLHTNNVGMAMELFHEKMSE--GHSPDAIMYFTMISGLTQAGRLEDA--CS 374
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + K+ A N ++ C + EA +L MK P ++ ++N +
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRP-----DVCTYNTL 429
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C G F E+ KM + C P ++F L+ CK G + EA + M + G+
Sbjct: 430 LSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGI 489
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+P+ Y L+D + VD F +M + + N+ +N L+ L M ++A
Sbjct: 490 HPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFE 549
Query: 251 FFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEI 282
D M ++ D + +M+ L G+ D +
Sbjct: 550 LMDQMREERCFPDYVTVDVLMEWLPVIGETDRL 582
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 9/248 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D ++Y ++ G + G + + +KE G D Y L+ G+ K
Sbjct: 347 EGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE--AGFKLDTKAYNILIAGFCRKKRL 404
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E E + ++ N++L C G F +L +M ++ P +
Sbjct: 405 HEAYELLQEM--KEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVI--- 459
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+F + GYC G+ +A+ + R M E P+ + +N LID LCK G + A EL+
Sbjct: 460 --TFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFD 517
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +K V + T+ L+ + N + +M + P+ + L+ L +G
Sbjct: 518 EMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIG 577
Query: 244 MLDEAKSF 251
D K F
Sbjct: 578 ETDRLKRF 585
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 12/273 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y L+ GF + G + L +++ L GV + +V+ +++ GY GM E+A+E
Sbjct: 290 TYGALINGFCKIGQIEAAEMLLADMQ--LRGVGHNQIVFNTMIDGYCRHGMVEKALEI-- 345
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+AV E +++ N++ LC + ++A KL M K +A N S+ +
Sbjct: 346 KAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAE-----KGVAPNYVSYTTLI 400
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
+ +G +A +FR M P +++N +ID KNG + EAE EM KG+
Sbjct: 401 SIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLV 460
Query: 192 PDEYTY-GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD YTY GL+ C +VD F +M G +PN+ Y LV L + G +EA
Sbjct: 461 PDIYTYAGLVHGHCVN-GKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQ 519
Query: 251 FFDIMVKK-LKMDDASYKFMMKALSDGGKLDEI 282
+D M+ L DD Y ++ +L + D +
Sbjct: 520 LYDDMLAAGLTPDDTLYSVLVGSLHTDSRKDPL 552
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 10/270 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ L+ + R + D V L +E++ + GV Y L+ G G + Y+E
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENR--GVEPTVGTYTILVDGLSRAGDISKVEAVYDE 243
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+N V ++V++A C G A ++FD P N ++ + +
Sbjct: 244 MKRKN--VAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEP-----NERTYGALIN 296
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G+C G+ + A + M + + FN +ID C++GM+ +A E+ M G+
Sbjct: 297 GFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIEL 356
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
D YTY L VNR++D M + G+ PN Y L+ + G + EA+ F
Sbjct: 357 DIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLF 416
Query: 253 -DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
D+ K + +Y M+ G + E
Sbjct: 417 RDMEGKGSRPSVVTYNVMIDGYIKNGSIRE 446
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 9/244 (3%)
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
++ ++ + V+D C +G D+A L D + P + +N +N + D Y Q R
Sbjct: 146 VTPLSASVVVDGFCKSGSVDDAHGLLDEL-----PRHGVGLNACCYNSLLDSYTRQ-RND 199
Query: 142 DAIEVFRKMGEYR-CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
DA+ K E R P ++ L+D L + G +++ E +Y EM K V D Y Y +
Sbjct: 200 DAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAV 259
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKL 259
++A V + F + V G+ PN Y L+ ++G ++ A+ D+ ++ +
Sbjct: 260 INAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGV 319
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
+ + M+ G +++ LEI +++ GIE + L + R E+
Sbjct: 320 GHNQIVFNTMIDGYCRHGMVEKALEI-KAVMEKMGIELDIYTYNTLACGLCRVNRMEDAK 378
Query: 320 KLME 323
KL+
Sbjct: 379 KLLH 382
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 9/166 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ L+ ++GD RLF +++ K G V Y ++ GY G
Sbjct: 387 KGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGK--GSRPSVVTYNVMIDGYIKNGSI 444
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E E + ++ C NGK D AL+LF+ MK+ P N
Sbjct: 445 REAERFKKEM--EKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKP-----N 497
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQL 169
+ ++ + G +GR ++A +++ M +PD ++ L+ L
Sbjct: 498 VVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 144/312 (46%), Gaps = 41/312 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D VY+ L+ + + G D +F +++++ G+ D V YG+++
Sbjct: 332 MVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQ--GLNPDAVTYGAVIGILCKS 389
Query: 61 GMEEEAMECYNEAVGENSS---------------------------------VKMSAVAN 87
G E+AM + + + E S + ++ +
Sbjct: 390 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 449
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
NS++D+ C G+ E+ KLFD M P ++ +++ + DGYC G+ +A+++
Sbjct: 450 NSIIDSHCKEGRVIESEKLFDLMVRIGVKP-----DIITYSTLIDGYCLAGKMDEAMKLL 504
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M P+T+++ LI+ CK + +A L+ EM GV+PD TY +++ F+
Sbjct: 505 SGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQT 564
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASY 266
R + ++ +SG + L+ YN ++ L + + D+A + F ++ + LK++ ++
Sbjct: 565 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF 624
Query: 267 KFMMKALSDGGK 278
M+ AL G+
Sbjct: 625 NIMIDALLKVGR 636
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 156/357 (43%), Gaps = 42/357 (11%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ GF ++GDS + + E+ ++ + D V Y S++ +
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDR--RISPDVVTYSSIIAALCKGQAMD 248
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+AME V + V + S++ C++G+ EA+ +++++ P L ++
Sbjct: 249 KAMEVLTSMV--KNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDI 306
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + GY +G + M PD +N LI K G + EA ++ +
Sbjct: 307 ATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSK 366
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG- 243
M +G+NPD TYG ++ + RV+D YF +M+D GL P VYN L+ L
Sbjct: 367 MRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 426
Query: 244 ----------MLD------------------------EAKSFFDIMVK-KLKMDDASYKF 268
MLD E++ FD+MV+ +K D +Y
Sbjct: 427 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 486
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG--ELSKEGREEEVVKLME 323
++ GK+DE ++++ G++ G + + + G ++S+ G + K ME
Sbjct: 487 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEME 543
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 133/294 (45%), Gaps = 16/294 (5%)
Query: 41 GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF 100
GG D V Y +++ G+F +G +A Y+E + + + V +S++ ALC
Sbjct: 190 GGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEML--DRRISPDVVTYSSIIAALCKGQAM 247
Query: 101 DEALKLFDRM-KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
D+A+++ M KN P N ++ + GYC G+ K+AI +K+ PD
Sbjct: 248 DKAMEVLTSMVKNGVMP------NCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDG 301
Query: 160 L-----SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
L ++ L+ G L L M G++PD Y Y +L+ A + +VD+
Sbjct: 302 LEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAM 361
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
F KM GL P+ Y ++G L + G +++A +F+ M+ + L + Y ++ L
Sbjct: 362 LVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 421
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
K + E++ +LD GI + + KEGR E KL + R
Sbjct: 422 CTCNKWERAEELILEMLDR-GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 474
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 125/282 (44%), Gaps = 19/282 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDG-----VVYGSLMKGYFM 59
G D + YS L+ G+ G D +L L G+VS G V Y +L+ GY
Sbjct: 476 GVKPDIITYSTLIDGYCLAGKMDEAMKL-------LSGMVSVGLKPNTVTYRTLINGYCK 528
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+A+ + E E+S V + N +L L + A +L+ R+
Sbjct: 529 ISRMGDALVLFKEM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT---- 582
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ L ++N++ G C DA+ +F+ + + +FN +ID L K G EA+
Sbjct: 583 -QIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAK 641
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L+ S G+ P+ +TY L+ + +++ F M D+G + + N +V +L
Sbjct: 642 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 701
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+Q G + A ++ ++ +K +AS + L GGK E
Sbjct: 702 LQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQE 743
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + G C R DA++ V R+M E C PD S L+ LC EA EL
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHM 183
Query: 185 MSD---KGVNPDEYTYGLLMDACFEVNRVDDGATY--FRKMVDSGLRPNLAVYNRLVGKL 239
M+D G PD +Y +++ F+ D G Y + +M+D + P++ Y+ ++ L
Sbjct: 184 MADGRGGGSAPDVVSYTTVINGFFKEG--DSGKAYSTYHEMLDRRISPDVVTYSSIIAAL 241
Query: 240 VQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ +D+A MVK M + +Y +M G+ E + + + DG
Sbjct: 242 CKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDG 296
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 142/294 (48%), Gaps = 13/294 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + V ++ + + G + L E++ E G + V Y +L+ G+ ++
Sbjct: 412 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEH--GCEVNIVTYNALVNGFCVQ 469
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+E + + K + + ++L LCN + D A +L M K
Sbjct: 470 GRVDSALELF-----YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ-----KDC 519
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A N+ +FNV+ +C +G +AIE+ +M E+ C+P+ +++N L+D + K+ EA E
Sbjct: 520 APNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALE 579
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L + GV+PD TY ++ +RV++ F + D G+RP +YN+++ L
Sbjct: 580 LLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALC 639
Query: 241 QVGMLDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ D A FF MV M ++ +Y +++ L++ L E +++ + G
Sbjct: 640 KRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 693
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 19/294 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ ++ G R+G D L G D V Y +++KG
Sbjct: 237 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY--GFQPDTVSYTTVLKGLCAA 294
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL----CNNGKFDEALKLFDRMKNEHNP 116
E+ E + E + +N + N D L C G + A+++ ++M
Sbjct: 295 KRWEDVEELFAEMMEKN------CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG-- 346
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
A N N++ + C QGR DA + MG Y CSPDT+S+ ++ LC+
Sbjct: 347 ---CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 403
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A+EL EM K P+E T+ + + ++ +M + G N+ YN LV
Sbjct: 404 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 463
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
G +D A F M K + +Y ++ L + +LD E++ +L
Sbjct: 464 NGFCVQGRVDSALELFYSM--PCKPNTITYTTLLTGLCNAERLDAAAELLAEML 515
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 123/282 (43%), Gaps = 12/282 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D + L++ +G +A A E S + A N+++ C G+ D
Sbjct: 104 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAA--ERSGTAVDVFAYNTLVAGYCRYGQLD 161
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
A +L M +A + ++ + G C +GR +A+ + M C P ++
Sbjct: 162 AARRLIASMP--------VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVT 213
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ L++ +CK+ +A E+ EM KG P+ TY ++++ RVDD + ++
Sbjct: 214 YTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLS 273
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLD 280
G +P+ Y ++ L ++ + F ++M K ++ ++ +++ GG ++
Sbjct: 274 SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVE 333
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
++++ + G + L V + K+GR ++ + +
Sbjct: 334 RAIQVLEQ-MSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 374
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 147/325 (45%), Gaps = 12/325 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D YS L+ G G+ D +F EL E+ + D V Y +++ G+ G +E++E
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI--DVVTYNTMLGGFCRCGKIKESLE 346
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ +NS ++ V+ N ++ L NGK DEA ++ M P K A + ++
Sbjct: 347 LWRIMEHKNS---VNIVSYNILIKGLLENGKIDEATMIWRLM-----PAKGYAADKTTYG 398
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ G C G A+ V +++ D ++ ++ID LCK L EA L EMS
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
GV + + L+ +R+ + + + R+M +G RP + YN L+ L + G EA
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 249 KSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+F M++ K D +Y ++ L K+D LE+ L G+E + +
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL-QSGLETDVMMHNILIH 577
Query: 308 ELSKEGREEEVVKLMEKKEREKAEA 332
L G+ ++ + +M E A
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTA 602
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 158/359 (44%), Gaps = 70/359 (19%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M+ +GF D YS ++ + G D LF+E+ E+ GV D Y L+ G+ +
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER--GVAPDVTCYNILIDGFLKE 232
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK-NEHNP--- 116
+ AME ++ + E+SSV + +N ++ L G+ D+ LK+++RMK NE
Sbjct: 233 KDHKTAMELWDRLL-EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 117 --------------------------PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
++ ++++ ++N M G+C G+ K+++E++R M
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL----------- 199
E++ S + +S+N LI L +NG + EA ++ M KG D+ TYG+
Sbjct: 352 -EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYV 410
Query: 200 ------------------------LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
++D + R+++ + ++M G+ N V N L
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+G L++ L EA F M K + SY ++ L GK E V +L++G
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 12/279 (4%)
Query: 6 FVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
F +P + SY L+ FV V LF + GV + Y L+K K
Sbjct: 108 FGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET--AGVAPNLQTYNVLIKMSCKKKEF 165
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A + E K + ++V++ L GK D+AL+LFD M P +
Sbjct: 166 EKARGFLDWMWKE--GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAP-----D 218
Query: 124 LGSFNVMADGYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ +N++ DG+ + K A+E++ R + + P+ + N +I L K G + + +++
Sbjct: 219 VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIW 278
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M D YTY L+ + VD + F ++ + ++ YN ++G +
Sbjct: 279 ERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRC 338
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
G + E+ + IM K ++ SY ++K L + GK+DE
Sbjct: 339 GKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDE 377
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 12/276 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG+ AD Y + G +G + + +E++ G + D Y S++ K
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL--DVYAYASIIDCLCKK 442
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
EEA E V++++ N+++ L + + EA M KN P
Sbjct: 443 KRLEEASNLVKEM--SKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRP--- 497
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ S+N++ G C G+F +A ++M E PD +++ L+ LC++ + A
Sbjct: 498 ---TVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ + G+ D + +L+ V ++DD T M NL YN L+
Sbjct: 555 ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
+VG + A + M K L+ D SY +MK L
Sbjct: 615 FKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLC 650
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 143 AIEVFRKMGE-YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
A++VF++M E + C P S+N L++ + + E L+ GV P+ TY +L+
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LK 260
+ + + M G +P++ Y+ ++ L + G LD+A FD M ++ +
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
D Y ++ +E+ +L+D + + + + LSK GR ++ +K
Sbjct: 217 PDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276
Query: 321 L---MEKKEREK 329
+ M++ EREK
Sbjct: 277 IWERMKQNEREK 288
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 5/152 (3%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+L LC + K D AL+L+ + L ++ N++ G C G+ DA+ V
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQS-----GLETDVMMHNILIHGLCSVGKLDDAMTVMAN 594
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M C+ + +++N L++ K G A ++G M G+ PD +Y +M
Sbjct: 595 MEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRG 654
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
V +F + G+ P + +N LV +V
Sbjct: 655 VSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
Length = 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 144/322 (44%), Gaps = 10/322 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ ++ R+GD D L L + + V Y +++KG+
Sbjct: 1 MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSR--SCKPNTVNYNTVLKGFCSI 58
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A E +E V EN + + N ++ LC G + + ++M ++H
Sbjct: 59 ERWVDANEILDEVVSENCPPNEATL--NVTINTLCRKGLLQKVTRYLEKM-SKHG----C 111
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N + G C QG A+E+ M + C PD +++N ++ LC +AEE
Sbjct: 112 TTNVVTYNAIIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEE 171
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +MS D T+ ++ + + F++M + G PN Y+ ++G LV
Sbjct: 172 LMIKMSQNDRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLV 231
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+ +++A + M K D Y + K+L+ K++E++++V L D GI
Sbjct: 232 KASKMEQALELLNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQVVHK-LQDSGISPQTV 290
Query: 301 LQEFVKGELSKEGREEEVVKLM 322
L V L + G+ + ++
Sbjct: 291 LYNTVLLGLCRNGKTNYAIDVL 312
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 135/269 (50%), Gaps = 11/269 (4%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
R G V R E++ + G ++ V Y +++ G +G + A+E + ++
Sbjct: 90 LCRKGLLQKVTRYLEKMSKH--GCTTNVVTYNAIIGGLCEQGNVDSALELLSNM--QSFG 145
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
K V N+VL LC+ ++++A +L +M RL N +FN + +C +G
Sbjct: 146 CKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND----RLRDN-STFNTIISFWCQKGL 200
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
A+EVF++M E C+P++ +++ +I L K + +A EL EM++KG N D+ Y +
Sbjct: 201 ILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALELLNEMANKGFNTDKM-YLV 259
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKL 259
L + + +++++ K+ DSG+ P +YN ++ L + G + A MV
Sbjct: 260 LTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCG 319
Query: 260 KM-DDASYKFMMKALSDGGKLDEILEIVG 287
M D+++Y +++ L G L E E++
Sbjct: 320 CMPDESTYIILIEGLFYEGYLKEARELLS 348
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 95/239 (39%), Gaps = 43/239 (17%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y+ ++ G G+ D L ++ G D V Y +++KG
Sbjct: 106 MSKHGCTTNVVTYNAIIGGLCEQGNVDSALELLSNMQS--FGCKPDIVTYNTVLKGLCSA 163
Query: 61 GMEEEAMECY-----NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
E+A E N+ + +NS+ N+++ C G +AL++F +M +
Sbjct: 164 DRWEDAEELMIKMSQNDRLRDNSTF-------NTIISFWCQKGLILQALEVFKQMPEKGC 216
Query: 116 PPKRLAVNL-----------------------GSFN------VMADGYCGQGRFKDAIEV 146
P + FN V+ + + ++ ++V
Sbjct: 217 NPNSTTYSTIIGGLVKASKMEQALELLNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQV 276
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
K+ + SP T+ +N ++ LC+NG A ++ +M G PDE TY +L++ F
Sbjct: 277 VHKLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGLF 335
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 136/275 (49%), Gaps = 14/275 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ GF G + E++E+ GG+ D Y +++ G+ G E+A + +
Sbjct: 148 VTYNTVIAGFCARGRVQAGIEIMREMRER-GGIAPDKYTYATVISGWCKVGKVEDATKVF 206
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+E + E V+ +AV N+++ C+ G + AL+ M + + +++ + ++N+
Sbjct: 207 DEMLTEG-KVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVD-----RGVSMTVATYNLF 260
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+GR +A + +MGE +PD ++N LI+ CK G +A +++ M KG+
Sbjct: 261 VHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGI 320
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
TY L+ A V + F V G+RP+L +YN L+ G +D A
Sbjct: 321 RATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRA-- 378
Query: 251 FFDIM----VKKLKMDDASYKFMMKALSDGGKLDE 281
F+IM K++ DD +Y +M+ L G+LDE
Sbjct: 379 -FEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDE 412
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 12/276 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G Y+ + +G + L EE+ EK G+ D Y L+ GY +
Sbjct: 245 MVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEK--GLAPDAFTYNILINGYCKE 302
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKR 119
G E++AM+ + VG+ ++ + V S++ AL G E +LF D ++ P
Sbjct: 303 GKEKKAMKMFEVMVGKG--IRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRP--- 357
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+L +N + + +C G A E+ +M + R +PD +++N L+ LC G L EA
Sbjct: 358 ---DLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEAR 414
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L EM+ +G+ PD +Y L+ + D +M+ G P L YN ++ L
Sbjct: 415 GLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGL 474
Query: 240 VQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALS 274
G +A+ MV + DD++Y +++ L+
Sbjct: 475 CLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLT 510
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 6/244 (2%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
+ V Y +++ G+ +G + +E E + E + +V+ C GK ++A
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAGIEIMRE-MRERGGIAPDKYTYATVISGWCKVGKVEDAT 203
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
K+FD M E ++ N +N + GYC QG + A+ +M + S ++N
Sbjct: 204 KVFDEMLTE----GKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNL 259
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+ L G AEA L EM +KG+ PD +TY +L++ + + F MV G
Sbjct: 260 FVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKG 319
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
+R + Y L+ L GM+ E F+ V++ ++ D Y ++ + GG +D
Sbjct: 320 IRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAF 379
Query: 284 EIVG 287
EI+G
Sbjct: 380 EIMG 383
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 136/282 (48%), Gaps = 9/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ ++ G+ + G + ++F+E+ + G V + V+Y +L+ GY +G E
Sbjct: 178 GIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTE-GKVEPNAVMYNALIGGYCDQGNLE 236
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ E V + V M+ N + L G+ EA L + M K LA +
Sbjct: 237 VALRYRGEMV--DRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGE-----KGLAPDA 289
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ +GYC +G+ K A+++F M +++ +LI L GM+ E + L+ +
Sbjct: 290 FTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFND 349
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+G+ PD + Y L+++ +D +M + P+ YN L+ L +G
Sbjct: 350 AVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGR 409
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
LDEA+ + M K+ ++ D SY ++ S G + + +++
Sbjct: 410 LDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKV 451
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 8/208 (3%)
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
RL ++ +FN+M C G+ A+E+ R+M SP+ +++N +I C G +
Sbjct: 111 RLPLSTTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAG 166
Query: 179 EELYGEMSDK-GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG-LRPNLAVYNRLV 236
E+ EM ++ G+ PD+YTY ++ +V +V+D F +M+ G + PN +YN L+
Sbjct: 167 IEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALI 226
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
G G L+ A + MV + + M A+Y + L G+ E +V + + G
Sbjct: 227 GGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLA 286
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLME 323
+ + G KEG+E++ +K+ E
Sbjct: 287 PDAFTYNILING-YCKEGKEKKAMKMFE 313
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 150/340 (44%), Gaps = 44/340 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSL----------- 53
G + VVYS L+ G+ + G + V ++F E+ EK G+ D V+Y L
Sbjct: 180 GIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEK--GIEPDVVMYTGLIDSLCKVGKAK 237
Query: 54 -----MKGYFMKGMEEEAMECYN-------------EAVG-----ENSSVKMSAVANNSV 90
M +G+E + YN EA+G V V N++
Sbjct: 238 KAHGVMDMMVRRGLEPNVVT-YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ L + + DEA+ L + M N K N+ +FN + G C GR + A +V M
Sbjct: 297 IKGLSDVLEMDEAMWLLEEMVRGKNIVKP---NVVTFNSVIQGLCDIGRMRQAFQVRAMM 353
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E C + +++N LI L + + +A EL EM+ G+ PD +TY +L+ ++ +V
Sbjct: 354 EETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQV 413
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM 270
D M D G+ P L Y L+ + + GM++ A++ F+ M +D +Y M+
Sbjct: 414 DRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMI 473
Query: 271 KALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVK 306
G L E++ I+D+G + +S + F K
Sbjct: 474 HGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAK 513
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 4/247 (1%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
AV+ N+VL ALC G D A L M E +P R N S+ V+ C A
Sbjct: 77 AVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACR--PNAVSYTVLMRALCADRLADQA 134
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ + R M D +++ LI LC + +A EL GEM + G+ P+ Y L+
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
+ R +D F +M + G+ P++ +Y L+ L +VG +A D+MV++ L+ +
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+Y ++ + G + E + ++ + + G +KG LS +E + L+
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKG-LSDVLEMDEAMWLL 313
Query: 323 EKKEREK 329
E+ R K
Sbjct: 314 EEMVRGK 320
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 117/240 (48%), Gaps = 11/240 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ LM D +D L ++ GV +D V YG+L++G ++A+E
Sbjct: 116 VSYTVLMRALCADRLADQAVGLLRSMRS--AGVRADVVTYGTLIRGLCDAAEVDKAVELM 173
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E S ++ + V +S+L C +G++++ K+F M + P ++ + +
Sbjct: 174 GEMC--ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEP-----DVVMYTGL 226
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
D C G+ K A V M P+ +++N LI+ +CK G + EA + +MS+KGV
Sbjct: 227 IDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGV 286
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMV--DSGLRPNLAVYNRLVGKLVQVGMLDEA 248
PD TY L+ +V +D+ +MV + ++PN+ +N ++ L +G + +A
Sbjct: 287 APDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQA 346
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/383 (19%), Positives = 146/383 (38%), Gaps = 80/383 (20%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ L+ ++G + +++ EK GV D V Y +L+KG
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK--GVAPDVVTYNTLIKGLSDV 303
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE------------------ 102
+EAM E V + VK + V NSV+ LC+ G+ +
Sbjct: 304 LEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLV 363
Query: 103 -----------------ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
A++L D M + P +++++ G+C + A +
Sbjct: 364 TYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSF-----TYSILIKGFCKMWQVDRAED 418
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS------------------- 186
+ M + P+ + L+ +C+ GM+ A L+ EM
Sbjct: 419 LLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACK 478
Query: 187 ---------------DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
D+G+ PD TY ++++ + ++ ++M SG P++AV
Sbjct: 479 AGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAV 538
Query: 232 YNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKAL---SDGGKLDEILEIVG 287
++ L+ G +++ +++ K + +D + +L ++G L + L
Sbjct: 539 FDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFS 598
Query: 288 GILDDGGIEFSEELQEFVKGELS 310
+ G I +EL + + +S
Sbjct: 599 AEISKGNINSPQELMKVLHNAIS 621
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMS---DKGVNPDEYTYGLLMDACFEVNRVDDGA 214
D +S+N ++ LC+ G A L MS P+ +Y +LM A D
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
R M +G+R ++ Y L+ L +D+A M + ++ + Y +++
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 274 SDGGKLDEI 282
G+ +++
Sbjct: 196 CKSGRWEDV 204
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 130/287 (45%), Gaps = 10/287 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + Y+ L+ G R G L +E+ + +V DG Y L G
Sbjct: 76 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ--KMVPDGFTYSILFDGLSRN 133
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + + + + + + V + + +L+ LC +GK A ++ + N P R+
Sbjct: 134 GDSKAMLSLFGKYL--KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 191
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N + +GYC G + A F +M PD +++N LI+ LCK + A++
Sbjct: 192 I-----YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 246
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM D GVNP T+ L+DA +++ +M ++GL+PN+ Y +V
Sbjct: 247 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 306
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDAS-YKFMMKALSDGGKLDEILEIV 286
+ G + EA + D M K + +A Y ++ A + G D+ +V
Sbjct: 307 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 353
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 145/358 (40%), Gaps = 42/358 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + V D YS L G R+GDS + LF G + +GV G +
Sbjct: 111 MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLF-------GKYLKNGVTIGDYTCSILLN 163
Query: 61 GMEEEAMECYNEAVGE---NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G+ ++ E V + N+ + + V N++++ C G+ + A F +MK+ H P
Sbjct: 164 GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKP 223
Query: 118 KRLAVN------------------------------LGSFNVMADGYCGQGRFKDAIEVF 147
+ N + +FN + D Y G+ + V
Sbjct: 224 DHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVL 283
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M E P+ +S+ ++++ CKNG + EA + +M K V P+ Y ++DA E
Sbjct: 284 SEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEH 343
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASY 266
D KM +G+ P++ YN L+ L + EA+ + + +L D SY
Sbjct: 344 GPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSY 403
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ A G +D+ L++ + G + + G L GR E+ L +K
Sbjct: 404 NTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG-LGGAGRLNEMEYLYQK 460
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 137/307 (44%), Gaps = 41/307 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY------- 57
G V V+Y+ L+ G+ + G+ +G F F ++K + + D + Y +L+ G
Sbjct: 185 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR--HIKPDHITYNALINGLCKAERIT 242
Query: 58 ----FMKGMEE----EAMECYNEAVG------------------ENSSVKMSAVANNSVL 91
+ M++ +E +N + + + +K + V+ S++
Sbjct: 243 NAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIV 302
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+A C NGK EA+ + D M ++ P N +N + D Y G A + KM
Sbjct: 303 NAFCKNGKIPEAVAILDDMFHKDVLP-----NAQVYNAIIDAYVEHGPNDQAFILVEKMK 357
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
SP +++N LI LC ++EAEE+ +S+ + PD +Y L+ AC +D
Sbjct: 358 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 417
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMM 270
++M G++ + Y++L+ L G L+E + + M++ + +A + M+
Sbjct: 418 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMV 477
Query: 271 KALSDGG 277
+A S G
Sbjct: 478 EAYSKYG 484
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 6/180 (3%)
Query: 146 VFRKMG-EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
+ R+MG + P+ S+N +I + + G +A E++ EM+++ V P+ TY ++D
Sbjct: 1 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDD 263
+ ++ G +MV GL+PN YN L+ L + G + E + D M +K+ D
Sbjct: 61 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR---EEEVVK 320
+Y + LS G +L + G L + G+ + + L K+G+ EEV++
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKN-GVTIGDYTCSILLNGLCKDGKVSIAEEVLQ 179
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF K + + VY+ ++ +V G +D F L E++K G+ V Y L+KG +
Sbjct: 321 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN--GISPSIVTYNLLIKGLCNQ 378
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA E N N + AV+ N+++ A C G D+AL L RM +
Sbjct: 379 SQISEAEEIINSL--SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHK-----YGI 431
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +++ + G G GR + +++KM + P N +++ K G +AE+
Sbjct: 432 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 491
Query: 181 LYGEMSDKGVNPDE 194
L EM K N D+
Sbjct: 492 LRKEMLQKRNNHDD 505
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 106 LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
+ RM + PP N S+NV+ G GR DA+EVF +M E P+ +++N +
Sbjct: 1 MLRRMGRDGAPPP----NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 56
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
ID K G L L +M G+ P+ TY +L+ R+ + + +M +
Sbjct: 57 IDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 116
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK----MDDASYKFMMKALSDGGKLDE 281
P+ Y+ L L + G ++K+ + K LK + D + ++ L GK+
Sbjct: 117 VPDGFTYSILFDGLSRNG---DSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSI 173
Query: 282 ILEIVGGILDDG 293
E++ +++ G
Sbjct: 174 AEEVLQSLVNAG 185
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 111/210 (52%), Gaps = 6/210 (2%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
V N+++D++C + ++A L+ M + KR+ ++ ++N + +G+C G+ KDAI
Sbjct: 242 VMYNTIIDSMCKDKLDNDAFDLYSEMVS-----KRIFPDVNTYNALINGFCIVGKLKDAI 296
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
+F KM +PD +FN L+D CK G + EA+ M +G+ PD TY LMD
Sbjct: 297 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRY 356
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDD 263
VN V+ + F M G+ N+ Y+ ++ + ++ M+D+A F ++ K++ +
Sbjct: 357 CLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNV 416
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y ++ L G++ LE+ + D G
Sbjct: 417 ITYSSLIDGLCKSGRISYALELNDEMHDRG 446
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 149/326 (45%), Gaps = 56/326 (17%)
Query: 3 VKGFVADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
V G + P V+Y+ ++ +D + F L+ E+ K + D Y +L+ G+ +
Sbjct: 232 VDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSK--RIFPDVNTYNALINGFCIV 289
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK--------------- 105
G ++A+ +N+ EN + N ++DA C G+ EA
Sbjct: 290 GKLKDAIGLFNKMTSEN--INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVV 347
Query: 106 ----LFDR--MKNEHNPPKRL---------AVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
L DR + NE N K + N+ S+++M + +C A+++F++M
Sbjct: 348 TYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEM 407
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+ P+ +++++LID LCK+G ++ A EL EM D+G PD T
Sbjct: 408 HHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLT------------ 455
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFM 269
R++ D G+RPN+ Y L+ L + G L++A++ F D++VK + +Y M
Sbjct: 456 -------RQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVM 508
Query: 270 MKALSDGGKLDEILEIVGGILDDGGI 295
+ + G DE + ++ + D+ I
Sbjct: 509 IHGFCNKGLFDEAMTLLSKMKDNCCI 534
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 24/227 (10%)
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
K L NL +N + D C DA +++ +M R PD ++N LI+ C G L +
Sbjct: 235 KLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKD 294
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A L+ +M+ + +NPD YT+ +L+DA + RV + M+ G++P++ YN L+
Sbjct: 295 AIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMD 354
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILE------------ 284
+ V +++AKS F+ M + + + SY M+ +D+ ++
Sbjct: 355 RYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFP 414
Query: 285 -------IVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ G+ G I ++ EL + E+ G++ +++ L +
Sbjct: 415 NVITYSSLIDGLCKSGRISYALELND----EMHDRGQQPDIITLTRQ 457
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 39/268 (14%)
Query: 9 DPVVYSYLML--GFVRDGD----SDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+P VY++ +L F ++G +G+ + ++ G+ D V Y SLM Y +
Sbjct: 308 NPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQ------GIKPDVVTYNSLMDRYCLVNE 361
Query: 63 EEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A +N G ++V+ ++ +++ C D+A+KLF M + K++
Sbjct: 362 VNKAKSIFNTMSHRGVTANVRSYSI----MINRFCKIKMVDQAMKLFKEMHH-----KQI 412
Query: 121 AVNLGSFNVMADGYCGQGRF----------------KDAIEVFRKMGEYRCSPDTLSFNN 164
N+ +++ + DG C GR D I + R++ + P+ ++
Sbjct: 413 FPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTI 472
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
LID LCK G L +A ++ ++ KG N TY +++ D+ T KM D+
Sbjct: 473 LIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNC 532
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
PN Y ++ L D+A++FF
Sbjct: 533 CIPNAVTYEIIIRSLFDNDENDKAENFF 560
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ LM + + + +F + + GV ++ Y ++ +
Sbjct: 337 MMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHR--GVTANVRSYSIMINRFCKI 394
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M ++AM+ + E + + + + +S++D LC +G+ AL+L D M + P +
Sbjct: 395 KMVDQAMKLFKEM--HHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDII 452
Query: 121 AV-----------NLGSFNVMADGYCGQGRFKDAIEVFRKM--GEYRCSPDTLSFNNLID 167
+ N+ ++ ++ DG C GR +DA +F + Y + +T + +I
Sbjct: 453 TLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTV--MIH 510
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
C G+ EA L +M D P+ TY +++ + F+ + D +F K
Sbjct: 511 GFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFFVK 562
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
+++ R++ P+ + +N +ID +CK+ + +A +LY EM K + PD TY L++
Sbjct: 225 PLQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALIN 284
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
V ++ D F KM + P++ +N LV + G + EAK+ +M+K+ +K
Sbjct: 285 GFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKP 344
Query: 262 DDASYKFMM 270
D +Y +M
Sbjct: 345 DVVTYNSLM 353
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 150/345 (43%), Gaps = 27/345 (7%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDG--------------- 47
V+G + Y++L+ G + GDS + + FE++ E+ S
Sbjct: 410 VEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVC 469
Query: 48 ----VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEA 103
V Y +L+ G GM +A+ + S + + NSVLD LC + +A
Sbjct: 470 RPTLVTYNTLVTGLSKSGMVRDALGLLEFMI--ESGLSPDVITFNSVLDGLCKEQRILDA 527
Query: 104 LKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFN 163
+F R P N+ +++ + DG + +A+++ KM E C +T++++
Sbjct: 528 HNVFKRALERGCRP-----NVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYS 582
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
++D L K G + +A + +M D G PD TY L+D F+ R+ + R+M+++
Sbjct: 583 TVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEA 642
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEI 282
G P++ Y L L + G DEA D M + +A +Y ++ L G++ E
Sbjct: 643 GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEA 702
Query: 283 LEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
L + D + + L K GR +E + +E+ R
Sbjct: 703 LGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIR 747
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 11/278 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GF V Y+ L G R G D + + + + G + + Y S++ G
Sbjct: 639 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR--GCAPNAITYSSIVDGLCKA 696
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA+ Y E + + V +A ++++D LC G+ DEA + +RM P
Sbjct: 697 GRVTEALG-YFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIP--- 752
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +F+++ +G C GR +E+F M E C D ++N +I+ C G + A
Sbjct: 753 --DVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYA 810
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM G+ + T+G+++ A +R+D+ +YF + R ++ YN L+ LV
Sbjct: 811 LLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHS-IPEDCRDEIS-YNTLITSLV 868
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDAS-YKFMMKALSDGG 277
++A MV DA Y +M L G
Sbjct: 869 ASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAG 906
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 125/282 (44%), Gaps = 9/282 (3%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
V Y L+ G G +A + +A+ + + V ++V+D LC + + D+ KL
Sbjct: 2 VTYNVLINGLCKAGRVCDAFTAFRKAI--QFGFRPTVVTYSTVIDGLCRDNEVDKGCKLL 59
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
+ M P N ++N + + GQGR K+A + +M C P+ ++F +I
Sbjct: 60 EEMAGRGCAP-----NAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIK 114
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
LCK G + A + EM D+G PD + +L+ A E+ RVD+ +F++++ G P
Sbjct: 115 GLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTP 174
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIV 286
+ YN +V L + G L+ A ++ + ++ + LS G L E
Sbjct: 175 DAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFF 234
Query: 287 GGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
+ G + + G L K G+ + + L+ K +
Sbjct: 235 DSMPQTGVSPNTVTYDALIDG-LCKAGKLDIALGLLRDKNSQ 275
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 156/388 (40%), Gaps = 55/388 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G AD + Y+ L+ G + +R EL + G + V + +L++G G
Sbjct: 340 GCSADVITYNILLKGLCKLRRIPEAYR-HVELMRRTEGCSPNVVTFSTLIQGLCNAGRVN 398
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE----------H 114
+A E Y V + + +L+ LC G + F++M H
Sbjct: 399 QAWEVYERMVAVEG-ISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIH 457
Query: 115 NPPKRLAV------NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
+P + L ++N + G G +DA+ + M E SPD ++FN+++D
Sbjct: 458 SPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDG 517
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
LCK + +A ++ ++G P+ TY L+D ++ ++D+ KMV+ G R N
Sbjct: 518 LCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRAN 577
Query: 229 LAVYNRLVGKLVQVGMLDEA-------------------KSFFDIMVKKLKMDDA----- 264
Y+ +V L++VG +++A + D K+ ++ +A
Sbjct: 578 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 637
Query: 265 ------------SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE 312
+Y + L G+ DE +EI+ + G + V G L K
Sbjct: 638 EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDG-LCKA 696
Query: 313 GREEEVVKLMEKKEREKAEAKAREAEAA 340
GR E + EK R++ A A +A
Sbjct: 697 GRVTEALGYFEKMARDEVVAPHVIAYSA 724
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 144/323 (44%), Gaps = 52/323 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GFV D +++ L+ G D + F+++ L G D V Y +++ G +
Sbjct: 132 MVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVL--LIGFTPDAVTYNTMVDGLYKA 189
Query: 61 GMEEEA---MECYNEAVGENS-------------------------SVKMSAVANNSV-- 90
G E A ++ E+ + S+ + V+ N+V
Sbjct: 190 GRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTY 249
Query: 91 ---LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+D LC GK D AL L R KN + +F+ + G C R ++AI++
Sbjct: 250 DALIDGLCKAGKLDIALGLL-RDKNSQ-------AGMFAFSSLLHGLCQAHRLEEAIQLL 301
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ M C P+ + FN+L++ LC+ + EA EL+ M + G + D TY +L+ ++
Sbjct: 302 KAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKL 358
Query: 208 NRVDDGATYFRKMVDS-GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM--VKKLKMDDA 264
R+ + + M + G PN+ ++ L+ L G +++A ++ M V+ + +
Sbjct: 359 RRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRF 418
Query: 265 SYKFMMKALSDGG---KLDEILE 284
+Y F+++ L G +L++ E
Sbjct: 419 TYAFLLEGLCKAGDSRRLEQCFE 441
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 139/322 (43%), Gaps = 14/322 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + D V +S L+ G G D LF + E+ G +D Y +++ Y +K
Sbjct: 745 MIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAER--GCKADIYAYNAMINAYCLK 802
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A E + + + V + V+ ALC N + DEA+ F H+ P+
Sbjct: 803 GEFSAAYALLEEM--KTHGIAKNTVTHGIVIKALCGNDRIDEAVSYF------HSIPEDC 854
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ S+N + R + A+E+ R M SPD ++ ++D L K G A +
Sbjct: 855 RDEI-SYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAK 913
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM +G +PD TY +++ + ++ YF +M+ L+P+ VY+ L+
Sbjct: 914 LLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFC 973
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+ +D+A + ++ Y M+ +L D+ LE++ + E
Sbjct: 974 KADKVDDAWKL--LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIRE-MKSKNCEPGIH 1030
Query: 301 LQEFVKGELSKEGREEEVVKLM 322
+ + EGR +E VKL+
Sbjct: 1031 IWTSLATAYVAEGRVDEAVKLV 1052
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 130/325 (40%), Gaps = 59/325 (18%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF V YS ++ G RD + D +L EE+ + G + V Y
Sbjct: 31 GFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGR--GCAPNAVTY-------------- 74
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
N++++AL G+ EA L +RM PP+ L
Sbjct: 75 -----------------------NTLVNALLGQGRAKEAFSLLERMAANGCPPE-----L 106
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F ++ G C +G + A V +M + PD L+ LC+ G + EA + +
Sbjct: 107 ITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQ 166
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ G PD TY ++D ++ R++ + + +S P + + V L + G
Sbjct: 167 VLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGN 226
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD-----GGIEFS 298
L A FFD M + + + +Y ++ L GKLD I G+L D G FS
Sbjct: 227 LTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLD----IALGLLRDKNSQAGMFAFS 282
Query: 299 EELQEFVKGELSKEGREEEVVKLME 323
L L + R EE ++L++
Sbjct: 283 SLLH-----GLCQAHRLEEAIQLLK 302
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y +M G + G + +L +E++ + G D Y ++ G
Sbjct: 883 MVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSR--GHSPDLRTYTIMISGLSKA 940
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
A + + E + +N +K A+ +S++DA C K D+A KL +++ P
Sbjct: 941 KQLPLACDYFEEMLRKN--LKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEP--- 992
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ M D C A+EV R+M C P + +L G + EA +
Sbjct: 993 --TITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVK 1050
Query: 181 LYGEM 185
L ++
Sbjct: 1051 LVNDL 1055
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 146/320 (45%), Gaps = 11/320 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y+ L+ G ++G D + + G + + + +++ G
Sbjct: 45 RGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSY--GSQPNVITHNIILRSMCSTGRW 102
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + E V + S S V N +++ LC G A+ + ++M P L
Sbjct: 103 MDAEKLLTEMVRKGCSP--SVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSL--- 157
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N + G+C + + AI+ M C PD +++N ++ LCK+G + A EL
Sbjct: 158 --SYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLN 215
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++S KG +P TY ++D +V + D +M GL+P++ Y+ L+ L + G
Sbjct: 216 QLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREG 275
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++EA FF D+ +K + +Y +M L + D ++ + ++ G
Sbjct: 276 KVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYT 335
Query: 303 EFVKGELSKEGREEEVVKLM 322
++G ++ EG +E ++L+
Sbjct: 336 ILIEG-IANEGLAKEALELL 354
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 7/241 (2%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ +++A C +A+KL D M + P ++ ++NV+ +G C +GR +A
Sbjct: 16 VITYTILIEATCAESGVGQAMKLLDEMGSRGCKP-----DVVTYNVLVNGMCKEGRLDEA 70
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
I+ M Y P+ ++ N ++ +C G +AE+L EM KG +P T+ +L++
Sbjct: 71 IKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINF 130
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
+ KM G PN YN L+ + +D A + +IMV + D
Sbjct: 131 LCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPD 190
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+Y M+ AL GK+D +E++ + G + G LSK G+ ++ V+L+
Sbjct: 191 IVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDG-LSKVGKTDQAVELL 249
Query: 323 E 323
Sbjct: 250 H 250
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 9/190 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ ++ +DG D L +L K G + Y +++ G
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSK--GCSPVLITYNTVIDGLSKV 239
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+E +E G+ +K + +S++ L GK +EA+K F ++ P
Sbjct: 240 GKTDQAVELLHEMRGKG--LKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKP--- 294
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++N + G C + AI+ M C P +S+ LI+ + G+ EA E
Sbjct: 295 --NAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALE 352
Query: 181 LYGEMSDKGV 190
L E+ +GV
Sbjct: 353 LLNELCSRGV 362
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+EV + E C PD +++ LI+ C + +A +L EM +G PD TY +L++
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
+ R+D+ + M G +PN+ +N ++ + G +A+ MV+K
Sbjct: 61 MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
++ ++ L G L ++I+ + G S + G KE + + ++ +
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHG-FCKEKKMDRAIQYL 179
Query: 323 E 323
E
Sbjct: 180 E 180
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 10/254 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ + D +FE L++ V Y +++ GY G +
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR--VPCTYAYNTMIMGYGSAGKFD 325
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + S S +A N +L L GK DEALK+F+ MK + P NL
Sbjct: 326 EAYSLLERQRAKGSIP--SVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP------NL 377
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ D C G+ A E+ M + P+ + N ++D+LCK+ L EA ++ E
Sbjct: 378 STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEE 437
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M K PDE T+ L+D +V RVDD + KM+DS R N VY L+ G
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 245 LDEAKSFFDIMVKK 258
++ + M+ +
Sbjct: 498 KEDGHKIYKDMINQ 511
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 139/280 (49%), Gaps = 18/280 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+ FV D YS L+ G ++ G ++ + LF +KE+ G V D Y ++ G+ G
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ--GCVLDTRAYNIVIDGFCKCGKV 603
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + E + + + V SV+D L + DEA LF+ K+ KR+ +N
Sbjct: 604 NKAYQLLEEM--KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS-----KRIELN 656
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + DG+ GR +A + ++ + +P+ ++N+L+D L K + EA +
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + P++ TYG+L++ +V + + ++++M G++P+ Y ++ L + G
Sbjct: 717 SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Query: 244 MLDEAKSFFDIMVKKLKM-----DDASYKFMMKALSDGGK 278
+ EA + FD + K D A Y M++ LS+G +
Sbjct: 777 NIAEAGALFD----RFKANGGVPDSACYNAMIEGLSNGNR 812
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 159/329 (48%), Gaps = 25/329 (7%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
D + + L+ G + G D ++++E++ + ++ +VY SL+K +F G +E+
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD--SDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ Y + + +N S + + N+ +D + G+ ++ +F+ +K +R + S
Sbjct: 502 HKIYKDMINQNCSPDLQLL--NTYMDCMFKAGEPEKGRAMFEEIK-----ARRFVPDARS 554
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
++++ G G + E+F M E C DT ++N +ID CK G + +A +L EM
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
KG P TYG ++D +++R+D+ F + + N+ +Y+ L+ +VG +D
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 247 EAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEIL--------------EIVGGILD 291
EA ++M K L + ++ ++ AL +++E L ++ GIL
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 292 DGGIEFSEELQEFV-KGELSKEGREEEVV 319
+G + + + FV E+ K+G + +
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 149/317 (47%), Gaps = 14/317 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P Y+Y +++G+ G D + L E + K G + + Y ++ G +EA+
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK--GSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + E + ++++ +S N ++D LC GK D A +L D M+ P N+ +
Sbjct: 364 KVFEE-MKKDAAPNLSTY--NILIDMLCRAGKLDTAFELRDSMQKAGLFP-----NVRTV 415
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N+M D C + +A +F +M C+PD ++F +LID L K G + +A ++Y +M D
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+ Y L+ F R +DG ++ M++ P+L + N + + + G ++
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 248 AKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
++ F +I ++ D SY ++ L G +E E+ + + G + + +
Sbjct: 536 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 595
Query: 307 GELSKEGREEEVVKLME 323
G K G+ + +L+E
Sbjct: 596 G-FCKCGKVNKAYQLLE 611
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 137/286 (47%), Gaps = 13/286 (4%)
Query: 9 DPVV--YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+P V ++ L+ GF ++G D L +E+K + +D V+Y + + G + A
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS--SSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ ++E E + +K V S++ LC + DEA+++F+ ++ P A
Sbjct: 258 WKFFHEI--EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA----- 310
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N M GY G+F +A + + P +++N ++ L K G + EA +++ EM
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
K P+ TY +L+D ++D M +GL PN+ N +V +L + LD
Sbjct: 371 -KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
EA + F+ M K D+ ++ ++ L G++D+ ++ +LD
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 137/292 (46%), Gaps = 11/292 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D Y+ ++ GF + G + ++L EE+K K G V YGS++ G
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK--GFEPTVVTYGSVIDGLAKIDRL 638
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + EA ++ ++++ V +S++D G+ DEA + + + K L N
Sbjct: 639 DEAYMLFEEA--KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ-----KGLTPN 691
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L ++N + D +A+ F+ M E +C+P+ +++ LI+ LCK +A +
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +G+ P +Y ++ + + + F + +G P+ A YN ++ L
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+A S F+ ++ L + + + ++ L L++ IVG +L + G
Sbjct: 812 RAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA-AIVGAVLRETG 862
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF V Y ++ G + D + LFEE K K + + V+Y SL+ G+
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK--RIELNVVIYSSLIDGFGKV 670
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA E + + + + NS+LDAL + +EAL F MK P ++
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTW--NSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ +G C +F A +++M + P T+S+ +I L K G +AEA
Sbjct: 729 -----TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
L+ G PD Y +++ NR D + F + GL
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
D L LF +M+ P V+L F + G+ +GR A+ + +M D +
Sbjct: 185 DMMLTLFQQMQELGYEP---TVHL--FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+N ID K G + A + + E+ G+ PDE TY ++ + NR+D+ F +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKL 279
+ P YN ++ G DEA S + K + +Y ++ L GK+
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 280 DEILEI 285
DE L++
Sbjct: 360 DEALKV 365
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ +F++M E P F LI K G + A L EM ++ D Y + +D+
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMD- 262
+V +VD +F ++ +GL+P+ Y ++G L + LDEA F+ + K ++
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+Y M+ GK DE ++ G I S + L K G+ +E +K+
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP-SVIAYNCILTCLRKMGKVDEALKVF 366
Query: 323 EKKEREKA 330
E+ +++ A
Sbjct: 367 EEMKKDAA 374
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 139 RFKD---AIEVFR---KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
R KD AIE FR + E P+ S+N+L+ + + +++ GEMS G P
Sbjct: 74 RLKDVNRAIEYFRWYERRTELPHCPE--SYNSLLLVMARCRNFDALDQILGEMSVAGFGP 131
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
T ++ C + N++ +G + M RP + Y L+G V D + F
Sbjct: 132 SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 253 DIMVKKLKMDDASYKF--MMKALSDGGKLDEILEIV 286
M ++L + + F +++ + G++D L ++
Sbjct: 192 QQM-QELGYEPTVHLFTTLIRGFAKEGRVDSALSLL 226
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 135/274 (49%), Gaps = 13/274 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D Y+ L+ + G + + ++ L + + V Y +++ GY G
Sbjct: 334 RGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMR--LKNISPNVVTYSTMIDGYGKLGCF 391
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EEA+ Y++ + S V+ V+ N+++D G+FD+AL M+ L +
Sbjct: 392 EEAIGLYHDM--KESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVG-----LKAD 444
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + D Y QG++KDA +F KM P+ L+++ LID K GM +A ++
Sbjct: 445 VVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFV 504
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV---GKLV 240
E G+ PD Y L+D+C + V+D ++M +G++PN+ YN L+ G+
Sbjct: 505 EFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNG 564
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALS 274
QV ++ AK I V K+ D S + + K L+
Sbjct: 565 QVDNVEAAKGNMPINVFN-KVGDRSTEIICKTLT 597
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 129/304 (42%), Gaps = 57/304 (18%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +K + V YS ++ G+ + G + L+ ++KE GV D V Y +L+ Y
Sbjct: 366 MRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKES--GVRPDRVSYNTLIDIYAKL 423
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ + E +K V N+++DA GK+ +A LFD+MK E P
Sbjct: 424 GRFDDALTACKDM--ERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVP--- 478
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +++ + D Y G +DA +F + PD + +++LID CK G++ +A
Sbjct: 479 --NVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVV 536
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD---------------------------- 212
L EM+ G+ P+ TY L+DA +VD+
Sbjct: 537 LLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTL 596
Query: 213 --------------GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK------SFF 252
+ F +M GL+PN+ ++ ++ + L EA FF
Sbjct: 597 TSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQMRFF 656
Query: 253 DIMV 256
D V
Sbjct: 657 DSWV 660
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 113/233 (48%), Gaps = 13/233 (5%)
Query: 50 YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD--EALKLF 107
Y +++ Y G EA++ + + + K + + N+++DA C G D +AL +F
Sbjct: 237 YSAMVSAYGRSGRCREALKVFQAM--KKAGCKPNLITYNTIIDA-CGKGGVDLKKALDIF 293
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR-FKDAIEVFRKMGEYRCSPDTLSFNNLI 166
+ M+ E P R+ +FN + C +G ++D+ VF +M D ++N LI
Sbjct: 294 EEMQKEGVEPDRI-----TFNSLI-AVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLI 347
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
D +CK G + A + M K ++P+ TY ++D ++ ++ + M +SG+R
Sbjct: 348 DAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVR 407
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGK 278
P+ YN L+ ++G D+A + M + LK D +Y ++ A GK
Sbjct: 408 PDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGK 460
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 12/231 (5%)
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+G E A++ Y V + + + ++ L GK + AL +F+R +
Sbjct: 175 RGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAG----- 229
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM-LAEA 178
N+ +++ M Y GR ++A++VF+ M + C P+ +++N +ID K G+ L +A
Sbjct: 230 FGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKA 289
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+++ EM +GV PD T+ L+ C + +D F +M G+ ++ YN L+
Sbjct: 290 LDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDA 349
Query: 239 LVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDG-GKLDEILEIVG 287
+ + G ++ A S M +K + + +Y M+ DG GKL E +G
Sbjct: 350 VCKGGQMELAASIMSSMRLKNISPNVVTYSTMI----DGYGKLGCFEEAIG 396
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 147/281 (52%), Gaps = 10/281 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y L+ G + G D +RLFE++ + G ++ VVY SL++ +F+ G +
Sbjct: 318 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLD--AGHNANPVVYTSLIRNFFIHGRK 375
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+ + + E + ++ + N+ +D + G+ ++ +F+ +++ P +
Sbjct: 376 EDGHKVFKELIRRGCKPDLTLL--NTYMDCVFKAGEVEKGRMIFEDIRSYGFLP-----D 428
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S++++ G G+ ++ +F M + + D ++N ++D CK+G + +A E+
Sbjct: 429 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILE 488
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +K V P TYG ++D +++R+D+ F + G+ N+ +Y+ L+ +VG
Sbjct: 489 EMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 548
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
+DEA + M+KK L + ++ ++ AL +++E L
Sbjct: 549 RIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 589
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 150/337 (44%), Gaps = 12/337 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y+ ++ + G LF +++ + V Y +++ GY G
Sbjct: 144 QGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS--VPCAYAYNTMIMGYGSAGRF 201
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A + E + E + S V+ NS+L L K DEAL LF+ MK + P N
Sbjct: 202 EDAYKLL-ERLRERGCIP-SVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP------N 253
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N++ D C GR ++A + +M P+ L+ N ++D+LCK L EA +++
Sbjct: 254 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 313
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
S +G NPD TY L+D + +VD+ F KM+D+G N VY L+ G
Sbjct: 314 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 373
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++ F ++++ K D M + G++++ I I G +
Sbjct: 374 RKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 433
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+ G L+K G+ E + +++ AR A
Sbjct: 434 ILIHG-LTKAGQARETSNIFHAMKQQGFALDARAYNA 469
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 132/275 (48%), Gaps = 10/275 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF+ D YS L+ G + G + +F +K++ G D Y +++ G+ G
Sbjct: 424 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ--GFALDARAYNAVVDGFCKSGKVH 481
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E E + V+ + +++D L + DEA LF+ K+ K + +N+
Sbjct: 482 KAYEILEEM--KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS-----KGIELNV 534
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG+ GR +A + +M + +P+ ++N+L+D L K + EA +
Sbjct: 535 VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 594
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + P+ YTY +L++ V + + +++ M GL PN+ Y ++ L +VG
Sbjct: 595 MKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGN 654
Query: 245 LDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGK 278
+ +A S F+ + D AS+ +++ +S+ +
Sbjct: 655 ITDAYSLFERFKANGGIPDAASFNALIEGMSNANR 689
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ AL G+ +AL L D +K P ++ +NV D + G A + F
Sbjct: 84 TTLVRALAREGQVADALALVDEVKGSCLEP-----DIVLYNVCIDCFGKAGNVDMACKFF 138
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
++ PD +S+ ++I LCK G L EAEEL+ +M + P Y Y ++
Sbjct: 139 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSA 198
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
R +D ++ + G P++ +N ++ L + +DEA S F++M K + + ++Y
Sbjct: 199 GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYN 258
Query: 268 FMMKALSDGGKLDEILEIV 286
++ L GG+++E I+
Sbjct: 259 IIIDMLCLGGRVEEAYRIL 277
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 2/201 (0%)
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ V+ R + A+E+ R+M E F L+ L + G +A+A L
Sbjct: 45 FSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVD 104
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + PD Y + +D + VD +F ++ GL+P+ Y ++ L + G
Sbjct: 105 EVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAG 164
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L EA+ F M + + A +Y M+ G+ ++ +++ + + G I
Sbjct: 165 RLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFN 224
Query: 303 EFVKGELSKEGREEEVVKLME 323
+ L K+ + +E + L E
Sbjct: 225 SILTC-LGKKRKVDEALSLFE 244
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 3/191 (1%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
R DA+ M + P ++ LI L + A EL +M + G + +
Sbjct: 25 RLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFT 84
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVK 257
L+ A +V D ++ S L P++ +YN + + G +D A FF ++ +
Sbjct: 85 TLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQ 144
Query: 258 KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
LK DD SY M+ L G+L E E+ + + + + + G GR E+
Sbjct: 145 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMG-YGSAGRFED 203
Query: 318 VVKLMEK-KER 327
KL+E+ +ER
Sbjct: 204 AYKLLERLRER 214
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V+YS L+ GF + G D + + EE+ +K G+ + + SL+
Sbjct: 528 KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK--GLTPNVYTWNSLLDALVKAEEI 585
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA+ C+ + + + +++ LC K+++A + M+ + P N
Sbjct: 586 NEALVCFQSM--KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVP-----N 638
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
+ ++ M G G DA +F + PD SFN LI+
Sbjct: 639 VVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE 682
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 48/291 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKG---- 56
M ++GF D V Y+ L+ GF G D LF EL++ D + +L+KG
Sbjct: 190 MPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ------PDMYTHAALVKGLCDA 243
Query: 57 -------YFMKGME------------------------EEAMECYNEAVGENSSVKMSAV 85
Y ++ M+ EEA + NE +N V AV
Sbjct: 244 RRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMF-DNGLVP-CAV 301
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
+V++A C G+ A+++F+ MK + P N+ ++N M G+C G+ A+
Sbjct: 302 TCTAVVNAYCREGRMSGAVRVFESMKLKGCEP-----NVWTYNAMVQGFCNVGKVYKAMA 356
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+ +M E PD +++N LI C +G + A L M G+ D+YTY +L+DA
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALC 416
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
+ +VD+ + F + G+RPN +N ++ L + G D A +F + MV
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMV 467
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 128/289 (44%), Gaps = 14/289 (4%)
Query: 1 MFVKGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF 58
M +KG +P V++Y ++ GF G L ++++E GV D V Y L++G
Sbjct: 326 MKLKG--CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRE--CGVEPDVVTYNLLIRGQC 381
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ G E A + E + + N ++DALC GK DEA LFD ++ P
Sbjct: 382 IDGHIESAFRLLR--LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRP- 438
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N +FN + +G C G+F A KM C+PDT +++ I+ LCK E
Sbjct: 439 ----NSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREG 494
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EM K V P Y +++D F+ + +MV G P++ Y V
Sbjct: 495 LSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRA 554
Query: 239 LVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIV 286
G L EA++ M K + +D +Y ++ + GK D + I+
Sbjct: 555 YCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTIL 603
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 135/343 (39%), Gaps = 41/343 (11%)
Query: 16 LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVG 75
L+ F R + + RLF + G G Y +L++ + A + V
Sbjct: 99 LLTHFSRYALTPLMLRLFAHMYHH-GPPAPTGATYNALIRALCRRADLRHAQRYLSLMV- 156
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
S + A NS++ C + D A LFD+M P + + + S+ + +G+C
Sbjct: 157 -RSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKM-----PLRGFSQDAVSYAALIEGFC 210
Query: 136 GQGRFKDAIEVFR-------------------------------KMGEYRCSPDTLSFNN 164
GR +A+E+FR KM E P T ++
Sbjct: 211 ETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
L+D C+ EAE++ EM D G+ P T +++A R+ F M G
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
PN+ YN +V VG + +A + D M + ++ D +Y +++ G ++
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390
Query: 284 EIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
++ +++ G+ + + L K G+ +E L + E
Sbjct: 391 RLL-RLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 130/338 (38%), Gaps = 57/338 (16%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G DG + FRL ++ G+ +D Y L+ G +
Sbjct: 365 GVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEG--NGLAADQYTYNVLIDALCKTGKVD 422
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------- 117
EA ++ E ++ ++V N+V++ LC GKFD A ++M + P
Sbjct: 423 EACSLFDGL--EYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSP 480
Query: 118 --KRLAVNLGS---------------------FNVMADGYCGQGRFKDAIEVFRKMGEYR 154
+ L GS + ++ D + + A ++ +M
Sbjct: 481 FIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLG 540
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
CSPD +++ + C G L EAE + EM G+ D Y L+D + + D
Sbjct: 541 CSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAV 600
Query: 215 TYFRKMVDSGLRPN-------------------LAVYNRLVGKLVQVGMLDEAKSFFDIM 255
T + M PN + + V K ++ L + F++M
Sbjct: 601 TILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIE---LADVFELFELM 657
Query: 256 VKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDD 292
K A +Y +++ S+ +LDE+ +V + +D
Sbjct: 658 KKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKED 695
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 12/231 (5%)
Query: 104 LKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFN 163
L+LF M + H PP A ++N + C + + A M PD +FN
Sbjct: 113 LRLFAHMYH-HGPP---APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFN 168
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
+LI C+ L A++L+ +M +G + D +Y L++ E RVD+ FR++
Sbjct: 169 SLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE-- 226
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS--YKFMMKALSDGGKLDE 281
+P++ + LV L +E M K+L A+ Y ++ K +E
Sbjct: 227 --QPDMYTHAALVKGLCDARRGEEGLYMLQKM-KELGWRPATRAYAALVDLWCREQKAEE 283
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
+++ + D+G + + V +EGR V++ E + + E
Sbjct: 284 AEKMLNEMFDNGLVPCAVTCTAVVNA-YCREGRMSGAVRVFESMKLKGCEP 333
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
V + + A CN G+ EA + MK + V+ ++N + DG+ G+ A+
Sbjct: 546 VTYTTSVRAYCNEGRLHEAENVVMEMKK-----GGIIVDAMAYNTLIDGHTSIGKTDHAV 600
Query: 145 EVFRKMGEYRCSPDTLSFNNL----------------IDQLCKNGMLAEAEELYGEMSDK 188
+ + M P+ +F L + K LA+ EL+ M
Sbjct: 601 TILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKN 660
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
V Y +++ E R+D+ + M + L N +Y LV ++ M +A
Sbjct: 661 SVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDA 720
Query: 249 KSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGI 289
+ M+ + + SY++++ + G+ D EI G+
Sbjct: 721 WALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGL 762
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 13/176 (7%)
Query: 29 VFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGE--NSSVKMSAVA 86
VF LFE +K+ V S Y ++++G+ EE ++ V + ++
Sbjct: 650 VFELFELMKK--NSVPSSARAYLAILEGF----SEERRLDEVTSLVSHMKEDDLPLNEDI 703
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
S+++ C + +A L M P NL S+ + G+ +G+ A E+
Sbjct: 704 YTSLVNCFCKLRMYPDAWALLCSMIGHGFLP-----NLISYQYLLSGFTAEGQADRAKEI 758
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
FR + + D + + +ID L + G ++ + P + TY +L +
Sbjct: 759 FRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTE 814
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 150/328 (45%), Gaps = 54/328 (16%)
Query: 4 KGFVADPVVYSYL---MLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+G++ D V Y+ L + G + G D +FEE+K + G++ + + Y SL+ G+
Sbjct: 154 RGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQ--GMIPNVISYSSLVHGFCCA 211
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK---FDEALKLFDRMKNEHNPP 117
G EE+ +NE V + V+ + V N ++D LC GK A KLF M P
Sbjct: 212 GKLEESKRLFNEMVDQ--GVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSM-----PS 264
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI----------- 166
K N S+ ++ +GYC + ++A+ ++ +M + P+ +++ L+
Sbjct: 265 KGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGD 324
Query: 167 ------------------------DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
D LCKNG+L EA EL+ E+ D +Y L+D
Sbjct: 325 ANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLID 384
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK---- 258
+ +V+ +F+++ GL+PN+ N ++ +V +D+A F+ M K
Sbjct: 385 GLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENG 444
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIV 286
D +Y +++ + KL+E++ ++
Sbjct: 445 CTPDIITYNTLLRGFCESNKLEEVVNLL 472
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 16/242 (6%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE--AVGENSSVK 81
GD +LF + K G + + Y L+ GY EEAM YNE VG+ +VK
Sbjct: 250 GDLSSARKLFLSMPSK--GCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVK 307
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
+ ++L L GK +A KLF MK ++V+ + + DG C G
Sbjct: 308 TYS----TLLTGLLQTGKVGDANKLFGVMK-----ASGISVDSCIYVIFLDGLCKNGVLF 358
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
+A+E+F ++ Y D S++ LID LCK G + A E + ++S +G+ P+ T +++
Sbjct: 359 EAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMI 418
Query: 202 DACFEVNRVDDGATYFRKMV---DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
V +VD F KM ++G P++ YN L+ + L+E + M K+
Sbjct: 419 HGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 478
Query: 259 LK 260
++
Sbjct: 479 MR 480
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
YS L+ G ++ G +LF +K G+ D +Y + G G+ EAME +N
Sbjct: 308 TYSTLLTGLLQTGKVGDANKLFGVMKA--SGISVDSCIYVIFLDGLCKNGVLFEAMELFN 365
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E N K+ + + ++D LC GK + A + F ++ E P N+ + N+M
Sbjct: 366 ELKSYN--FKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQP-----NVVTCNIMI 418
Query: 132 DGYCGQGRFKDAIEVFRKMG---EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
G+C + A +F KM E C+PD +++N L+ C++ L E L +M
Sbjct: 419 HGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 475
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 11/194 (5%)
Query: 95 CNNGKFD--EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
C G D +A FD M H P + SFN + G + ++ KM
Sbjct: 64 CKTGNIDVIQAFHFFDLMMRSHPIPP-----ISSFNRLLGGLAKINHYSQLFSLYNKMRL 118
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV-- 210
SPD + N L + LC ++E + +G PD TY L+ + + +V
Sbjct: 119 AGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGH 178
Query: 211 -DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
D+ F +M G+ PN+ Y+ LV G L+E+K F+ MV + ++ + +
Sbjct: 179 EDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNV 238
Query: 269 MMKALSDGGKLDEI 282
++ L GK+ ++
Sbjct: 239 LIDILCKEGKIGDL 252
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
A F M P SFN L+ L K ++ LY +M G++PD +T +L
Sbjct: 73 QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILA 132
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG---KLVQVGMLDEAKSFFDIM-VK 257
+ +NRV +G ++ G P++ YN L+ L +VG DEAK F+ M +
Sbjct: 133 NCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQ 192
Query: 258 KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ + SY ++ GKL+E + ++D G
Sbjct: 193 GMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQG 228
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 160/354 (45%), Gaps = 50/354 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG + +Y+ L+ G + GD +LF+ + EK G+ D V Y +++ GY
Sbjct: 585 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK--GLEPDSVTYSTMIDGYCKS 642
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA ++E + V+ + N+++ C G ++A+ LF M K
Sbjct: 643 ENVAEAFSLFHEM--PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ-----KGF 695
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A L SFN + DGYC + ++A ++F++M + PD +++ +ID CK G + EA
Sbjct: 696 ATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 754
Query: 181 LYGEMSD-----------------------------------KGVNPDEYTYGLLMDA-C 204
L+ EM + KGV PDE TYGL++ A C
Sbjct: 755 LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 814
Query: 205 FEVNRVDDGATYFR-KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
E N V+ A R ++V G+ +++ L+ L + L EA D M + LK
Sbjct: 815 KEDNLVE--AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPS 872
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
A+ ++++ + GK+DE + G+ G + + L + V G L+ E+
Sbjct: 873 LAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSED 926
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 40/311 (12%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V + +LG+ + G + F+E+ + G++ + +Y L+ G+F G
Sbjct: 448 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDH--GLMPNNPLYTVLINGHFKAGNL 505
Query: 64 EEAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP---- 117
EA+ + A+G V+ + + + L NG+ EALK+F +K + P
Sbjct: 506 MEALSIFRHLHALGVLPDVQTCS----AFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 561
Query: 118 --------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
K +A N+ +N + DG C G + A ++F M
Sbjct: 562 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 621
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
E PD+++++ +ID CK+ +AEA L+ EM KGV P + Y L+ C + ++
Sbjct: 622 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDME 681
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
FR+M+ G L+ +N L+ + + EA F M+ K++ D +Y ++
Sbjct: 682 KAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 740
Query: 271 KALSDGGKLDE 281
GK++E
Sbjct: 741 DWHCKAGKMEE 751
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 124/271 (45%), Gaps = 10/271 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VVYS L++G+ +G + RL + + GV D Y +++
Sbjct: 375 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM--SCSGVAPDIFCYNAIISCLSKA 432
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA E G +K AV + + GK EA K FD M + P
Sbjct: 433 GKMEEASTYLLEIQGR--GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP--- 487
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N + V+ +G+ G +A+ +FR + PD + + I L KNG + EA +
Sbjct: 488 --NNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 545
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ E+ +KG+ PD +TY L+ + V+ +M G+ PN+ +YN LV L
Sbjct: 546 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 605
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ G + A+ FD M +K L+ D +Y M+
Sbjct: 606 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMI 636
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 17/284 (5%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+V + Y + G EA + E + + +K A ++++D G D
Sbjct: 204 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM--QKTGLKPDYNACSALIDGFMREGDID 261
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
E L++ D M + P +NL ++NV+ G C G+ + A E+ + M C P++ +
Sbjct: 262 EVLRIKDVMVSCGIP-----INLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 316
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
F LI+ C+ + A EL EM + + P +YG +++ + KM
Sbjct: 317 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 376
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLD 280
SGL+PN+ VY+ L+ G ++EA+ D M + D Y ++ LS GK++
Sbjct: 377 FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 436
Query: 281 E----ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
E +LEI G L + F F+ G SK G+ E K
Sbjct: 437 EASTYLLEIQGRGLKPDAVTFG----AFILG-YSKTGKMTEAAK 475
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 149/351 (42%), Gaps = 42/351 (11%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRL----------------------------FEEL 36
G D S L+ GF+R+GD D V R+ E+
Sbjct: 239 GLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKA 298
Query: 37 KEKLGGVVSDGV-----VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
E L G+++ G + L++GY + A+E +E E ++ SAV+ +++
Sbjct: 299 AEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM--EKRNLVPSAVSYGAMI 356
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ LC+ A KL ++M P N+ ++ + GY +GR ++A + M
Sbjct: 357 NGLCHCKDLSLANKLLEKMTFSGLKP-----NVVVYSTLIMGYASEGRIEEARRLLDGMS 411
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+PD +N +I L K G + EA E+ +G+ PD T+G + + ++
Sbjct: 412 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 471
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMM 270
+ A YF +M+D GL PN +Y L+ + G L EA S F + + D + +
Sbjct: 472 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 531
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
L G++ E L++ + + G + + G K+G E+ +L
Sbjct: 532 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG-FCKQGEVEKAFEL 581
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 151/342 (44%), Gaps = 52/342 (15%)
Query: 2 FVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEEL-KEKLGGVVSDGVVYGSLMKGYFMK 60
F KG + V+++ L+ G + LF++L +E + + V+YG++M G K
Sbjct: 134 FKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICE--PNEVMYGTVMNGLCKK 191
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-- 118
G ++A + + E S K + + V+DA C +G D A L + MK + PP
Sbjct: 192 GHTQKAFDLLR--LMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIF 249
Query: 119 ----------------------------RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ N+ +FN + DG C +G+ +DA E+ R M
Sbjct: 250 TYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYM 309
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E PD +++N +ID G + A E++ M +K + P+ +Y +L++ ++
Sbjct: 310 IEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKI 369
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM 270
D+ R++ GL+P++ N L+ L ++G A++FFD M+ + D
Sbjct: 370 DEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPD------- 422
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE 312
L ++GG +G +E E + F K E +E
Sbjct: 423 --------LYTHCTLLGGYFKNGLVE--EAMSHFHKLERRRE 454
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 133/275 (48%), Gaps = 10/275 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
+ +YS ++ F +DG DG L E+K+K + D Y +L+ E
Sbjct: 211 PNTCIYSIVIDAFCKDGMLDGATSLLNEMKQK--SIPPDIFTYSTLIDALCKLSQWENVR 268
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E + N + + NSV+D LC GK ++A ++ M + P ++ ++
Sbjct: 269 TLFLEMIHLN--IYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDP-----DVITY 321
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N++ DGY +G+ A E+F M P+ +S+N LI+ + + EA ++ E+S
Sbjct: 322 NMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQ 381
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
KG+ P T +L+ FE+ R +F +M+ +G P+L + L+G + G+++E
Sbjct: 382 KGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEE 441
Query: 248 AKSFFDIMVKKLKMDDAS-YKFMMKALSDGGKLDE 281
A S F + ++ + + Y ++ L GKLD+
Sbjct: 442 AMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDK 476
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 110/220 (50%), Gaps = 5/220 (2%)
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
A+ + + V N++L L K +A+ LF ++ E+ N + + +
Sbjct: 131 AIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN----ICEPNEVMYGTVMN 186
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G C +G + A ++ R M + P+T ++ +ID CK+GML A L EM K + P
Sbjct: 187 GLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPP 246
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
D +TY L+DA ++++ ++ T F +M+ + PN+ +N ++ L + G +++A+
Sbjct: 247 DIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIM 306
Query: 253 DIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
M++K + D +Y ++ G++D EI +++
Sbjct: 307 RYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMIN 346
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 10/280 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D + Y+ ++ G+ G D +F+ + K + + + Y L+ GY +
Sbjct: 309 MIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINK--SIEPNIISYNILINGYARQ 366
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EAM+ E +K S V N +L L G+ A FD M + + P
Sbjct: 367 KKIDEAMQVCREI--SQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP--- 421
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L + + GY G ++A+ F K+ R + + +ID LCKNG L +A
Sbjct: 422 --DLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ ++ G++PD TY ++ + +D+ RKM D+G + YN +V +
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFL 539
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
+ + E K+F +I K + A+ + +M +++ L
Sbjct: 540 RSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSL 579
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 76/174 (43%), Gaps = 3/174 (1%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA +FR+M + P +SF+ L+ L + L+ E+ + E+ +++
Sbjct: 55 DAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVV 114
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--L 259
++C ++R D G + G+ N ++N L+ L + +A F +V++
Sbjct: 115 NSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENIC 174
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
+ ++ Y +M L G + +++ +++ G + + + V K+G
Sbjct: 175 EPNEVMYGTVMNGLCKKGHTQKAFDLL-RLMEQGSTKPNTCIYSIVIDAFCKDG 227
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 16/315 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ G + G+ + L EE+ K G D V Y +L+ ++ EA C
Sbjct: 133 VTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREA--CA 190
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + + N ++ +C +G +EAL++ D MK P ++ ++N +
Sbjct: 191 FREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVP-----DVITYNSI 245
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
C G+ +A E+ + M CSPD ++FN L+D CK GML A E+ EM + +
Sbjct: 246 IHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI 302
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD TY +L++ V +V ++V G P++ Y LV L + G ++EA
Sbjct: 303 LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 362
Query: 251 FFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF--VKG 307
M V+ + Y ++ G + + EI+ ++ I L + V G
Sbjct: 363 LVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMV---SINMVPPLFTYNIVLG 419
Query: 308 ELSKEGREEEVVKLM 322
L K+G + V L+
Sbjct: 420 GLIKDGSISKAVSLI 434
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 144/309 (46%), Gaps = 17/309 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + D + Y+ L+ G R G F L EE+ + G + D + Y SL+ G
Sbjct: 297 MCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQ--GYIPDVIAYTSLVDGLCKS 354
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA + E + V +S++ C G +A ++ M + + P
Sbjct: 355 GEIEEAHKLVKEM--SVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPP-- 410
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
L ++N++ G G A+ + + PD +++N LID LCK + EA +
Sbjct: 411 ---LFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 467
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM+ +G P++ T G ++ V RVDD + +M PN+ VY L+ L
Sbjct: 468 LADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLC 527
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEIL----EIVG-GILDDGG 294
+ +D+A D M + + +DD +Y+ ++ ++S GG++ E + E+V G L DG
Sbjct: 528 KSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGS 587
Query: 295 IEFSEELQE 303
S+ L+E
Sbjct: 588 T--SKTLEE 594
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 43/250 (17%)
Query: 75 GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGY 134
GE K + N +LD L +G K++ + + P NL +F ++ G
Sbjct: 18 GEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSP-----NLVTFKILIRGN 72
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI---------DQ----------------- 168
C G+ A+E R + E+ +PD FN LI DQ
Sbjct: 73 CKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEI 132
Query: 169 ---------LCKNGMLAEAEELYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYF 217
LCK+G L +A EL EM KG PD TY L++A + +R+ + +
Sbjct: 133 VTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFR 192
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDG 276
KM +G+ P++ N LV + + G ++EA D M + D +Y ++ AL
Sbjct: 193 EKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVA 252
Query: 277 GKLDEILEIV 286
GK+ E EI+
Sbjct: 253 GKVVEAAEIL 262
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 7/188 (3%)
Query: 97 NGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
+ + D A++ FD E + K ++ S+N + D G +V++ + CS
Sbjct: 4 SSRPDLAIQFFD-WAGEQDGYKH---DVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCS 59
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P+ ++F LI CK G A E + + V PD Y + +L+ F+ D
Sbjct: 60 PNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKL 119
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK---KLKMDDASYKFMMKAL 273
F M S ++P + YN ++ L + G L++A+ + M++ K D +Y ++ A
Sbjct: 120 FENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAF 179
Query: 274 SDGGKLDE 281
++ E
Sbjct: 180 YRASRIRE 187
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 83/196 (42%), Gaps = 11/196 (5%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P +++Y ++ G ++DG L +L + G V D V Y +L+ G EA
Sbjct: 409 PPLFTYNIVLGGLIKDGSISKAVSLISDLVAR--GYVPDVVTYNTLIDGLCKANRVREAC 466
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ +E + V SV+ LC G+ D+A L M KR A N+ +
Sbjct: 467 DLADEMASRGCFP--NDVTLGSVVFGLCRVGRVDDAWSLVVEMSR-----KRHAPNVVVY 519
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ DG C R DA V M + D ++ LI + G +AEA +Y EM
Sbjct: 520 TSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVA 579
Query: 188 KGVNPDEYTYGLLMDA 203
+G PD T L +A
Sbjct: 580 RGFLPDGSTSKTLEEA 595
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++G+ +F+ + + G+ V Y +LM GY G +
Sbjct: 120 GYPASLYFFNILMHRFCKEGNIRVAQSVFDAITK--WGLRPSVVSYNTLMSGYIRLGDLD 177
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++ S V+ + +++ LC K DEA +LFD M P +
Sbjct: 178 EGFRL--KSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGV---- 231
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M PD +++N LI LCK G L +A L E
Sbjct: 232 -TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXE 290
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG PD+ TY L+D C + +D + ++M+ +R + Y L+ L Q G
Sbjct: 291 MSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 350
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ K D +Y ++ G
Sbjct: 351 SVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKG 384
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 110/236 (46%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V GV + +L+ G+
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEML--VXGLVPXGVTFTTLIDGHCKN 243
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S+ + N+++ LC G +A L M + P ++
Sbjct: 244 GRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKI 301
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G A E ++M + D +++ LI LC+ G +AE+
Sbjct: 302 -----TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 356
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ EM G PD TY ++++ + V G+ ++M G P++ YN L+
Sbjct: 357 MLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLM 412
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V G V V ++ L+ G ++G D +++++ + ++ D + Y +L+ G K
Sbjct: 221 MLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ--SLLPDLITYNTLIYGLCKK 278
Query: 61 GMEEEAMECYNEAVGENS--SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G ++A + + E S K + +++D C G D A + RM E+
Sbjct: 279 GBLKQA----HVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN---- 330
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ ++ ++ + G C +GR DA ++ R+M PDT ++ +I++ CK G +
Sbjct: 331 -IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTG 389
Query: 179 EELYGEMSDKGVNPDEYTYGLLMD 202
+L EM G P TY +LM+
Sbjct: 390 SKLLKEMQRDGHVPSVVTYNVLMN 413
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 2/189 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E+
Sbjct: 58 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYQEIL 117
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + F + GLRP++ YN L+ +++G LD
Sbjct: 118 ECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLD 177
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E M ++ D +Y ++ L K+DE E+ +L G + +
Sbjct: 178 EGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLI 237
Query: 306 KGELSKEGR 314
G K GR
Sbjct: 238 DGH-CKNGR 245
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 131/277 (47%), Gaps = 17/277 (6%)
Query: 7 VADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
V + Y+ + G +R G D+ GV+ EE+ G D + Y +L+ G+ +
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVY---EEMIS--AGCSPDVITYSTLIHGFSLARKH 243
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A E + + + +AV N +L LC K DEA +LF +M P ++
Sbjct: 244 DQAHELFEAMISRG--CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKV--- 298
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ + G+C G+ + A+EVF +M PD +++N L+ + G EA +L+
Sbjct: 299 --TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQ 356
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM-VDSGLRPNLAVYNRLVGKLVQV 242
M + PD ++ +++D + R+DD F +M D G P+L YN L+ L
Sbjct: 357 VMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGE 416
Query: 243 GMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGK 278
L EA K F +I KL D ++ +++A+ G
Sbjct: 417 QRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 149/314 (47%), Gaps = 17/314 (5%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
+ G D L E + ++ G D + L+ +EA E + + + S
Sbjct: 59 LCKAGRVDSALSLLETMIKR--GYCPDMATHSMLINELCKADKIQEAQE-FLQGMNRTIS 115
Query: 80 VKMSAV-ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQG 138
+ S+ + NS+L++LC K +A +F M +E + + ++ S++++ DG+C
Sbjct: 116 TRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSE----RSVVPDVVSYSILIDGFCKID 171
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
A +++++M + C P+ ++N ++ L + G +A+A+ +Y EM G +PD TY
Sbjct: 172 ELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYS 231
Query: 199 LLMDACFEVNRVDDGAT-YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
L+ F + R D A F M+ G RPN YN L+ L + DEA F MV+
Sbjct: 232 TLIHG-FSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290
Query: 258 K-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG----IEFSEELQEFVKGELSKE 312
+ D +Y ++ + GK+++ +E+ ++ G + ++ L+ F + K
Sbjct: 291 RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA--GKP 348
Query: 313 GREEEVVKLMEKKE 326
G ++ ++M +E
Sbjct: 349 GEARQLFQVMVSRE 362
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 10/204 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ L+ G ++ D LF ++ E+ G D V Y +L+ G+
Sbjct: 253 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER--GCDPDKVTYTTLLYGFCNV 310
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A+E ++E V + + VA N +L GK EA +LF M + P +
Sbjct: 311 GKIEQAVEVFDEMVSKGHDPDV--VAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTV 368
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
S N+M DG R DA+EVF +M ++ CSPD +++N+LI LC L+EA
Sbjct: 369 -----SHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 423
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDA 203
+++ E+ ++PD + + +L++A
Sbjct: 424 KVFKEIDRLKLSPDPHAFNVLLEA 447
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 130/284 (45%), Gaps = 11/284 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+ V D V YS L+ GF + + +L++++ + V + Y + + G KG
Sbjct: 151 RSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDL--NCVPNVTTYNAFLNGLMRKGRI 208
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A Y E + S + + ++++ K D+A +LF+ M + P N
Sbjct: 209 ADAQGVYEEMISAGCSPDV--ITYSTLIHGFSLARKHDQAHELFEAMISRGCRP-----N 261
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + G C + + +A E+FRKM E C PD +++ L+ C G + +A E++
Sbjct: 262 AVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFD 321
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KG +PD Y L+ F + + F+ MV +P+ +N ++ L +
Sbjct: 322 EMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAK 381
Query: 244 MLDEAKSFFDIMVKK--LKMDDASYKFMMKALSDGGKLDEILEI 285
LD+A F+ M + D +Y ++ L +L E +++
Sbjct: 382 RLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKV 425
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + YS L+ GF D LFE + + G + V Y L+ G +
Sbjct: 218 MISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISR--GCRPNAVTYNCLLHGLCKE 275
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA E + + V V ++L CN GK ++A+++FD M ++ + P +
Sbjct: 276 SKPDEAHELFRKMV--ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 333
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A +N + G+ G+ +A ++F+ M C PDT+S N +ID L K L +A E
Sbjct: 334 A-----YNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVE 388
Query: 181 LYGEM-SDKGVNPDEYTY-GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
++ M D G +PD TY L+ C E R+ + F+++ L P+ +N L+
Sbjct: 389 VFERMEQDHGCSPDLVTYNSLIFGLCGE-QRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 447
Query: 239 LVQVG 243
+ G
Sbjct: 448 MYAAG 452
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S ++ VA + L LC +GK ++A + M+ + + G+ + + C
Sbjct: 5 SKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLS--SSQPPSSGTCHSVIQELCKA 62
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM------------ 185
GR A+ + M + PD + + LI++LCK + EA+E M
Sbjct: 63 GRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCF 122
Query: 186 --------------------------SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
S++ V PD +Y +L+D +++ + +++
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
M+D PN+ YN + L++ G + +A+ ++ M+ D +Y ++ S K
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
D+ E+ ++ G + + G L KE + +E +L K
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCLLHG-LCKESKPDEAHELFRK 287
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 45/282 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D + Y+ L+LGF +G +G FRL EE+ ++ G+ D Y L++G
Sbjct: 491 MLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR--GIQPDIYTYNFLLRG---- 544
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
LCN GK D+A+KL+D K L
Sbjct: 545 ---------------------------------LCNVGKLDDAIKLWDEFK-----ASGL 566
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ +M +GYC R +D +F ++ + +++ +N +I C+NG +A A +
Sbjct: 567 ISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQ 626
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M KG+ P+ TY L+ + V+D +M G PN+ Y L+G
Sbjct: 627 LLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYC 686
Query: 241 QVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
++G +D A+S + +++ + + +Y M+ G +++
Sbjct: 687 KLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEK 728
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 132/269 (49%), Gaps = 10/269 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D Y++L+ G G D +L++E K G++S+ YG +M+GY
Sbjct: 529 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKA--SGLISNIHTYGIMMEGYCKANRI 586
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+ +NE + + ++++++ N ++ A C NG AL+L + MK+ K + N
Sbjct: 587 EDVENLFNELLSK--KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS-----KGILPN 639
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++ + G C G +DA + +M + P+ + + LI CK G + AE +
Sbjct: 640 CATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWL 699
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM ++P+++TY +++D ++ ++ KM +SG+ P++ YN L +
Sbjct: 700 EMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAN 759
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
+D A D M + L +D+ +Y ++
Sbjct: 760 DMDNAFKVCDQMATEGLPVDEITYTTLVH 788
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 31/292 (10%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N L +L +F++ ++F M P ++ SF + + C G+ ++AIE+F
Sbjct: 190 NFXLSSLVKANEFEKCCEVFRVMSEGACP------DVFSFTNVINALCKGGKMENAIELF 243
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
KM + SP+ +++N +I+ LC+NG L A EL +M+ KGV P+ TYG L++ ++
Sbjct: 244 MKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKL 303
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
N D +M+ +G PN+ V+N L+ ++G ++ A D+M+ K + +
Sbjct: 304 NFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTL 363
Query: 267 KFMMKALSDGGK-------LDEILEIVGGILDDGGIEFSEELQE---------FVKGELS 310
+M+ + L+EIL I D L + F K LS
Sbjct: 364 YSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLS 423
Query: 311 KEGREEEVVKLM-------EKKEREKAEAKAREAE-AAEAAKRSARAAIASL 354
+ R +++ M + K E E R E + A+K ++ A I L
Sbjct: 424 RNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGL 475
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 130/282 (46%), Gaps = 16/282 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF + VV++ L+ G+ + G+ +G ++ + + K + V SLM+G+ E
Sbjct: 320 GFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISK--NITPTSVTLYSLMQGFCKSDQIE 377
Query: 65 EAMECYNEAVGENSSVKMSAVANN--SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
A A+ E S +S +N SV+ LC ++ A + M + + P L +
Sbjct: 378 HA----ENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLL 433
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ + G C G+ +A E++ ++ E ++ N LI LC G L EA +
Sbjct: 434 TM-----LVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIV 488
Query: 183 GEMSDKGVNPDEYTY-GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
EM ++G+ D TY L++ C E +V+ +M G++P++ YN L+ L
Sbjct: 489 KEMLERGLPMDRITYNALILGFCNE-GKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCN 547
Query: 242 VGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEI 282
VG LD+A +D L + +Y MM+ +++++
Sbjct: 548 VGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 589
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 111/266 (41%), Gaps = 14/266 (5%)
Query: 29 VFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANN 88
VFR+ E G D + +++ G E A+E + + E + + V N
Sbjct: 208 VFRVMSE------GACPDVFSFTNVINALCKGGKMENAIELFMKM--EKLGISPNVVTYN 259
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
+++ LC NG+ D A +L ++M + P NL ++ + +G F +
Sbjct: 260 CIINGLCQNGRLDNAFELKEKMTVKGVQP-----NLKTYGALINGLIKLNFFDKVNHILD 314
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+M +P+ + FNNLID CK G + A ++ M K + P T LM + +
Sbjct: 315 EMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSD 374
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
+++ +++ SGL + +V L + A F +M+ + + D
Sbjct: 375 QIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLT 434
Query: 268 FMMKALSDGGKLDEILEIVGGILDDG 293
++ L GK E E+ +L+ G
Sbjct: 435 MLVCGLCKDGKHLEATELWFRLLEKG 460
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 159/353 (45%), Gaps = 36/353 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D + Y+ L+ RD +L +E++++ G D V Y L+ G +
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNVLVNGICKE 287
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA++ N+ +S + + + +N +L ++C+ G++ +A KL M + P +
Sbjct: 288 GRLDEAIKFLNDM--PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 121 AVN-----------LG-------------------SFNVMADGYCGQGRFKDAIEVFRKM 150
N LG S+N + G+C + + AIE +M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
C PD +++N ++ LCK+G + +A E+ ++S KG +P TY ++D + +
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+M L+P+ Y+ LVG L + G +DEA FF + ++ + ++ +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
M L + D ++ + +++ G ++G L+ EG +E ++L+
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG-LAYEGMAKEALELL 577
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 139/306 (45%), Gaps = 14/306 (4%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
VR G+ + F+ E + G V D + +L++G+ G +A + + E S
Sbjct: 112 MVRTGELEEGFKFLENMVYH--GNVPDIIPCTTLIRGFCRLGKTRKAAKILE--ILEGSG 167
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ N ++ C G+ + AL + DRM ++ ++ ++N + C G+
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSVLDRMS--------VSPDVVTYNTILRSLCDSGK 219
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
K A+EV +M + C PD +++ LI+ C++ + A +L EM D+G PD TY +
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG-MLDEAKSFFDIMVKK 258
L++ + R+D+ + M SG +PN+ +N ++ + G +D K D++ K
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
++ ++ L G L ++I+ + G S + G KE + +
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG-FCKEKKMDRA 398
Query: 319 VKLMEK 324
++ +E+
Sbjct: 399 IEYLER 404
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 124/291 (42%), Gaps = 39/291 (13%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN--------LG--- 125
NSS + V +N+ L + G+ +E K + M N P + LG
Sbjct: 95 NSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTR 154
Query: 126 -------------------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
++NVM GYC G +A+ V +M SPD +++N ++
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTIL 211
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
LC +G L +A E+ M + PD TY +L++A + V +M D G
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
P++ YN LV + + G LDEA F D+ + + ++ +++++ G+ + ++
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 286 VGGILDDGGIEFSEELQEF--VKGELSKEGREEEVVKLMEKKEREKAEAKA 334
+ +L G FS + F + L ++G + ++EK + + +
Sbjct: 332 LADMLRKG---FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 121/265 (45%), Gaps = 9/265 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF V ++ L+ R G + E++ + G + + Y L+ G+ +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH--GCQPNSLSYNPLLHGFCKE 392
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ A+E V + V N++L ALC +GK ++A+++ +++ ++ P
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDI--VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV-- 448
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
L ++N + DG G+ AI++ +M PDT+++++L+ L + G + EA +
Sbjct: 449 ---LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ E G+ P+ T+ +M + + D + M++ G +PN Y L+ L
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDAS 265
GM EA + + K M +S
Sbjct: 566 YEGMAKEALELLNELCNKGLMKKSS 590
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 136/279 (48%), Gaps = 10/279 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF + VVY+ L+ G+ + G+ R+ ++ K G+ + V S+++G+ G
Sbjct: 412 KGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSK--GINPNSVTLNSIIQGFCKIGQM 469
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A E + S+ A +++ LC N +F+ AL+ M + P N
Sbjct: 470 EQAECILEEMLSRGFSINPGAFT--TIIHWLCMNSRFESALRFLREMLLRNMRP-----N 522
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
G + G C +G+ DA+E++ ++ E + ++ N LI LCK G + EA L
Sbjct: 523 DGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLK 582
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M ++G D+ TY L+ C + +V++G +MV G+ P+ YN L+ + ++G
Sbjct: 583 KMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIG 642
Query: 244 MLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDE 281
LDEA + ++ + L + +Y M+ K++E
Sbjct: 643 KLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 681
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 9/249 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ L+ G R G D L+ E K + +V + YG ++ GY
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR--DLVPNVYTYGVMIDGYCKA 676
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EE + + E + +N +++++V N+++ A C NG EA KL D M+++ PP
Sbjct: 677 DKIEEGEKLFTELLTQN--LELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTT- 733
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ + G C GR +DA + +M + P+ + + LI CK G + +
Sbjct: 734 ----ATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVN 789
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EMS ++P++ TY +++D + + A +MV G+ P+ YN L
Sbjct: 790 VLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 849
Query: 241 QVGMLDEAK 249
+ G ++E K
Sbjct: 850 KEGKIEEGK 858
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 137/282 (48%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF +P ++ ++ + + R E+ + +DG++ +L+ G +
Sbjct: 479 MLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR-NMRPNDGLL-TTLVGGLCKE 536
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A+E + + + + V N+++ LC G EA++L +M +
Sbjct: 537 GKHSDAVELWFRLLEKGFGANL--VTTNALIHGLCKTGNMQEAVRLLKKMLE-----RGF 589
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N + G C +G+ ++ ++ +M + PDT ++N LI +C+ G L EA
Sbjct: 590 VLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVN 649
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ E + + P+ YTYG+++D + +++++G F +++ L N VYN L+
Sbjct: 650 LWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYC 709
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ G EA D M K + A+Y ++ + + G++++
Sbjct: 710 RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMED 751
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 150/322 (46%), Gaps = 12/322 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG ++L+ V+ + + + +FE +++ GV D ++ + + + G
Sbjct: 273 KGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ---GVSPDVYLFSTAINAFCKGGKV 329
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A++ + + E V + V N+++ LC +G DEA + ++M + +
Sbjct: 330 EDAIQLFFDM--EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG-----VNAT 382
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +++V+ +G +F +A V ++ E +P+ + +N LID CK G L +A + G
Sbjct: 383 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 442
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M KG+NP+ T ++ ++ +++ +M+ G N + ++ L
Sbjct: 443 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS 502
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+ A F +++++ ++ +D ++ L GK + +E+ +L+ G
Sbjct: 503 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 562
Query: 303 EFVKGELSKEGREEEVVKLMEK 324
+ G L K G +E V+L++K
Sbjct: 563 ALIHG-LCKTGNMQEAVRLLKK 583
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 137/302 (45%), Gaps = 15/302 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GFV D + Y+ L+ G ++G + F+L E+ ++ G+ D Y L+ G
Sbjct: 584 MLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ--GIEPDTFTYNLLIHGMCRI 641
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ +NE ++ + + ++D C K +E KLF + ++ L
Sbjct: 642 GKLDEAVNLWNEC--KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN-----L 694
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N +N + YC G +A ++ M P T ++++LI +C G + +A+
Sbjct: 695 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 754
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM +G+ P+ Y L+ ++ ++D ++M + PN Y ++
Sbjct: 755 LIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYS 814
Query: 241 QVG-MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G M AK +++ K + D +Y + GK++E G +L + G+ F+
Sbjct: 815 KSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE-----GKLLAEDGVGFNS 869
Query: 300 EL 301
L
Sbjct: 870 PL 871
>gi|293334951|ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
gi|238006488|gb|ACR34279.1| unknown [Zea mays]
gi|413925463|gb|AFW65395.1| hypothetical protein ZEAMMB73_565010 [Zea mays]
Length = 462
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 148/323 (45%), Gaps = 11/323 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ + R D + ++E GV D V Y SL+ G G+
Sbjct: 42 GLPPDVVTYNTLLAAYCRVDGLDAGLAVVHRMRE--AGVRPDAVTYNSLITGADRSGLTV 99
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ ++E + S V + + N+++ L +G + A ++F M + P
Sbjct: 100 RALDLFDEML--RSGVAPDSWSYNALMHCLFRSGHPEHAYRVFADMADRGVAP-----CA 152
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG G +A +FR + +++N +I+ LCK+G + A + E
Sbjct: 153 TTYNTLLDGLLKAGHVTNAFRMFRYLQRAGLPVGIVTYNTMINGLCKSGKVGYARMVLKE 212
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ P+ TY +M CF R + G F +++ G + Y ++ LV+ G
Sbjct: 213 LGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFLSLLEGGYISDAFPYTTVISALVKKGR 272
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+ EA ++ ++M++ +D+A Y ++ GK+++ E++ ++++GG+E E
Sbjct: 273 MQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKINDAFELL-NMMEEGGLESDEYTFS 331
Query: 304 FVKGELSKEGREEEVVKLMEKKE 326
+ L K G+ E K + E
Sbjct: 332 ILVNGLCKMGQIEAAEKQIWSME 354
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 6/207 (2%)
Query: 74 VGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADG 133
V + +S N L +LC G D A + PP ++ ++N +
Sbjct: 2 VRSRGHLALSTRLMNVGLASLCRGGWLDRAESVLVDAIRLGLPP-----DVVTYNTLLAA 56
Query: 134 YCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD 193
YC + V +M E PD +++N+LI ++G+ A +L+ EM GV PD
Sbjct: 57 YCRVDGLDAGLAVVHRMREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPD 116
Query: 194 EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
++Y LM F + F M D G+ P YN L+ L++ G + A F
Sbjct: 117 SWSYNALMHCLFRSGHPEHAYRVFADMADRGVAPCATTYNTLLDGLLKAGHVTNAFRMFR 176
Query: 254 IMVKK-LKMDDASYKFMMKALSDGGKL 279
+ + L + +Y M+ L GK+
Sbjct: 177 YLQRAGLPVGIVTYNTMINGLCKSGKV 203
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 126/308 (40%), Gaps = 37/308 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ LM R G + +R+F ++ ++ GV Y +L+ G
Sbjct: 108 MLRSGVAPDSWSYNALMHCLFRSGHPEHAYRVFADMADR--GVAPCATTYNTLLDGLLKA 165
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPK- 118
G A + + + + + V N++++ LC +GK A + + + EH P
Sbjct: 166 GHVTNAFRMFRYL--QRAGLPVGIVTYNTMINGLCKSGKVGYARMVLKELGRTEHAPNAV 223
Query: 119 ------RLAVNLGSF--------NVMADGYCG--------------QGRFKDAIEVFRKM 150
+ G F +++ GY +GR ++A M
Sbjct: 224 TYTTVMKCCFRYGRFEQGLETFLSLLEGGYISDAFPYTTVISALVKKGRMQEANTYCELM 283
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+ + D +N LI C+ G + +A EL M + G+ DEYT+ +L++ ++ ++
Sbjct: 284 IQSGSTLDNACYNTLIHLRCQEGKINDAFELLNMMEEGGLESDEYTFSILVNGLCKMGQI 343
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM 270
+ M G++ N+ YN L+ L + +D A M KLK DD SY ++
Sbjct: 344 EAAEKQIWSMEMMGMQSNVVAYNCLIDALCKCHEVDAAIKILHSM--KLK-DDFSYTSLV 400
Query: 271 KALSDGGK 278
L G+
Sbjct: 401 HGLCKVGR 408
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 158/342 (46%), Gaps = 23/342 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-----VYGSLMK 55
M KG + +Y L+ G+ G ++++ L ++ DG+ + L+
Sbjct: 331 MVRKGQKPNSTIYHILLHGYATKGA-------LIDVRDLLDLMIRDGIPFEHRAFNILIC 383
Query: 56 GYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
Y G ++AM + E + ++ V+ ++V+ LC G+ ++A+ F++M +E
Sbjct: 384 AYAKHGAVDKAMTAFTEM--RQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGL 441
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P N+ SF + G C G +K E+ +M PD + N ++D LCK G +
Sbjct: 442 SP-----NIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 496
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
EA++ + + GV PD +Y L+D CF V ++D+ +MV GLRP+ YN
Sbjct: 497 VEAQDFFDMVIHIGVKPDVVSYNTLIDGYCF-VGKMDESIKQLDRMVSIGLRPDSWTYNS 555
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L+ + G +++A + + M +K +K + M+ L G++ E+ ++D
Sbjct: 556 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDR- 614
Query: 294 GIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
G + E V G L + +E +++ E ++ E R
Sbjct: 615 GTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVR 656
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 4/227 (1%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+++ LC K EAL+L M + + N+ S+N + DG+ +G A +F
Sbjct: 166 NALIKGLCVEKKSQEALELLIHMTADGG--YNCSPNVVSYNTVIDGFFKEGEVDKAYFLF 223
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M PD +++N+LID LCK + +A + M DKGV PD TY +++ +
Sbjct: 224 HEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSL 283
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
++++ +KM SGL+P++ Y+ L+ ++G EA+S FD MV+K K + Y
Sbjct: 284 GQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIY 343
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
++ + G L ++ +++ ++ D GI F + +K G
Sbjct: 344 HILLHGYATKGALIDVRDLLDLMIRD-GIPFEHRAFNILICAYAKHG 389
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 153/350 (43%), Gaps = 45/350 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVV-YGSLMKGYFMKGME 63
G+ D Y+ L+ G + S L + G S VV Y +++ G+F +G
Sbjct: 157 GYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEV 216
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A ++E +G+ + V NS++D LC D+A+ + M ++ P +
Sbjct: 217 DKAYFLFHEMMGQ--GLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMP-----D 269
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N+M GYC G+ ++A+ + +KM PD ++++ LI CK G AEA ++
Sbjct: 270 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFD 329
Query: 184 EMSDKGVNPDEYTYGLLMD------ACFEVN----------------------------- 208
M KG P+ Y +L+ A +V
Sbjct: 330 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHG 389
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
VD T F +M +GLRP++ Y+ ++ L + G +++A F+ MV + L + S+
Sbjct: 390 AVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFT 449
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
++ L G+ ++ E+ +++ GI + L KEGR E
Sbjct: 450 SLIHGLCSIGEWKKVEELAFEMINR-GIHPDAIFMNTIMDNLCKEGRVVE 498
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 140/318 (44%), Gaps = 55/318 (17%)
Query: 5 GFVADPVVYSYLMLGFVRDGD-SDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF----M 59
G D V YS ++ + G D V+ + + E G+ + + + SL+ G
Sbjct: 405 GLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSE---GLSPNIISFTSLIHGLCSIGEW 461
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
K +EE A E N + + A+ N+++D LC G+ EA FD + + P
Sbjct: 462 KKVEELAFEMINRGIHPD------AIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKP-- 513
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ S+N + DGYC G+ ++I+ +M PD+ ++N+L++ KNG + +A
Sbjct: 514 ---DVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDAL 570
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG-- 237
LY EM K V T +++ F+ R+ + KMVD G + + YN ++G
Sbjct: 571 ALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGL 630
Query: 238 ---------------------------------KLVQVGMLDEAKSFFDIMVKKLKMDDA 264
L++VG +DEAKS F MV + + D
Sbjct: 631 CENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDV 690
Query: 265 -SYKFMMKALSDGGKLDE 281
+Y M+K+ + G L+E
Sbjct: 691 ITYSLMIKSHIEEGLLEE 708
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 132/289 (45%), Gaps = 48/289 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + ++ L+ G G+ V L E+ + G+ D + ++M +
Sbjct: 436 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR--GIHPDAIFMNTIMDNLCKE 493
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + ++ + + VK V+ N+++D C GK DE++K DRM + P
Sbjct: 494 GRVVEAQDFFDMVI--HIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRP--- 548
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR-----CSPDT---------------- 159
+ ++N + +GY GR +DA+ ++R+M +R C+ +
Sbjct: 549 --DSWTYNSLLNGYFKNGRVEDALALYREM--FRKDVKFCAITSNIMLHGLFQAGRIVAA 604
Query: 160 ----------------LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
++N ++ LC+N + EA ++ ++ K D T+ ++++A
Sbjct: 605 RELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINA 664
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+V R+D+ + F MV G P++ Y+ ++ ++ G+L+E+ + F
Sbjct: 665 LLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLF 713
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 9/248 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G+ G D + + + G+ D Y SL+ GYF G E
Sbjct: 510 GVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSI--GLRPDSWTYNSLLNGYFKNGRVE 567
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ Y E ++ VK A+ +N +L L G+ A +L+ +M + + + +
Sbjct: 568 DALALYREMFRKD--VKFCAITSNIMLHGLFQAGRIVAARELYMKMVD-----RGTQLRI 620
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C +A+ +F + D +F+ +I+ L K G + EA+ L+
Sbjct: 621 ETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSA 680
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +G PD TY L++ + E +++ F M +G + + N +V +L++ G
Sbjct: 681 MVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGD 740
Query: 245 LDEAKSFF 252
+ A ++
Sbjct: 741 VRRAGTYL 748
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 9/220 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ L+ G+ ++G + L+ E+ K V + ++ G F
Sbjct: 541 MVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRK--DVKFCAITSNIMLHGLFQA 598
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A E Y + V + +++ N+VL LC N DEAL++F+ +++ K
Sbjct: 599 GRIVAARELYMKMVDRGTQLRIETY--NTVLGGLCENSCVDEALRMFEDLRS-----KEF 651
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ +F+++ + GR +A +F M PD ++++ +I + G+L E++
Sbjct: 652 ELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDN 711
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
L+ M G D + +++ E V TY K+
Sbjct: 712 LFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKI 751
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 126 SFNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ N + G C R DA++ VFR+M E +PD S+N LI LC EA EL
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187
Query: 185 MS-DKGVN--PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
M+ D G N P+ +Y ++D F+ VD F +M+ GL P++ YN
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYN-------- 239
Query: 242 VGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
S D + K MD A + I+ + D G + +
Sbjct: 240 --------SLIDGLCKAQAMDKA------------------VAILQHMFDKGVMPDTRTY 273
Query: 302 QEFVKGELSKEGREEEVVKLMEK 324
++G S G+ EE V+L++K
Sbjct: 274 NIMIRGYCSL-GQLEEAVRLLKK 295
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 143/292 (48%), Gaps = 14/292 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + + V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
E N +A G S V +V +++ LC K D+A +LFD M + P
Sbjct: 189 EGFRLKNAMQASGVQSDVYTYSV----LINGLCKASKMDDANELFDEMLDNGLVP----- 239
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +F + DG+C R A+E++++M SPD +++N LI LCK G L +A++L
Sbjct: 240 NGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EMS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q
Sbjct: 300 DEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 243 GM-LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
G +D K +++ LK + +Y ++ + G + L+++ + DG
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDG 411
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 109/231 (47%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G +D YS L+ G + D LF+E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 RRVDVAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ E V G ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 99/240 (41%), Gaps = 18/240 (7%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R + E++ + +++ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +LM + + + + F + LRP++ +N L+ +++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFS 298
LDE + M ++ D +Y ++ L K+D+ E+ +LD+G G+ F+
Sbjct: 186 DLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFT 245
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 146/321 (45%), Gaps = 13/321 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ +LG+ R G R+F + L G + Y +L+ G GM
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP--LRGCLRTAFTYTALLHGLLGAGMVR 159
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK-FDEALKLFDRMKNEHNPPKRLAVN 123
EAM + ++ + A +++ LC G+ + + L + M N P N
Sbjct: 160 EAMAVFVGMRADSCAPDTHVYA--TMVHGLCEAGRTEEAEVLLEEAMSNGFEP------N 211
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +N + DGYC G + A++VF M RCSP+ ++ LI LCK+G + A L+
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + G+ P+ TY L+ + M +GL PN ++ L+ L +
Sbjct: 272 RMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKRE 331
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++EA+ F +VKK +K+++ Y ++ L GK+D E++ ++ +G + +
Sbjct: 332 KVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYS 391
Query: 303 EFVKGELSKEGREEEVVKLME 323
+ G L ++ + + ++E
Sbjct: 392 SLIDG-LCRQKKLSQATLMLE 411
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 134/282 (47%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ L+ G +G FRL ++ G+V + + L+ + E
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETN--GLVPNDWTFSVLIDALCKREKVE 334
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA V + VK++ V S++D LC GK D A +L +M +E P +
Sbjct: 335 EAQLFLGSLVKKG--VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP-----DA 387
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S++ + DG C Q + A + M E +++ +ID+L + ++++ +
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK 447
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G+NPD TY + + + E R++D + +MVD G+ PNL YN L+ +G+
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ +A S F++MV K K ++ SY +++ + D ++I
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 93/238 (39%), Gaps = 11/238 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N++L AL + F + L RM P R NL ++ + + YC G A +
Sbjct: 45 NTLLMALARHRMFPDMESLASRM------PAR---NLRTYTTLINAYCLAGDIPAAKQHL 95
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ +PD+ ++ + + C+ GML A ++ M +G +TY L+
Sbjct: 96 TSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGA 155
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG-MLDEAKSFFDIMVKKLKMDDASY 266
V + F M P+ VY +V L + G + + M + + Y
Sbjct: 156 GMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVY 215
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ + G+++ L++ G+ + E + G L K G+ E + L +
Sbjct: 216 NALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHG-LCKSGKVERAMVLFSR 272
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 156/340 (45%), Gaps = 41/340 (12%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKE------------------KLGGV--------- 43
VVY+ L+ GF+R+G++D F++ +E+ K+G +
Sbjct: 328 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 387
Query: 44 ------VSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNN 97
D + Y +++G+F +++A +E EN+ + + + ++ LC +
Sbjct: 388 MVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM--ENAGISPNVYTYSIMIHGLCQS 445
Query: 98 GKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
G+ ++A L + M K L N + + GYC +G A E+F KM + P
Sbjct: 446 GEPEKASDLLEEMTT-----KGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 500
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
D +N+LI L K G + E+ + + +M ++G+ P+E+TY L+ + ++
Sbjct: 501 DLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV 560
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDG 276
++M+D+GL+PN +Y L+ + +++ S F M+ + + +D+ Y ++ LS
Sbjct: 561 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 620
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
G ++ ++ GI +G + + G RE+
Sbjct: 621 GNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREK 660
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 159/333 (47%), Gaps = 10/333 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + + YS L+ G++++GD + +L + + + G+ + V+Y L++ YF
Sbjct: 531 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDT--GLKPNDVIYIDLLESYFKSDDI 588
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+ + + + V + ++ L ++G + A ++ ++ + P +
Sbjct: 589 EKVSSTFKSML--DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVP-----D 641
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + G C + A + +M + P+ + +N LID LCK+G ++ A ++
Sbjct: 642 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 701
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ KG+ P+ TY L+D +V + + + +M+ +G+ P+ VY+ L G
Sbjct: 702 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 761
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L++A + M + +S+ ++ GK+ E L+++ I+ G + + ++
Sbjct: 762 DLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 821
Query: 304 FVKGELSKEGREEEVVKLMEKKEREKAEAKARE 336
+ G LS+ G+ EV + + +++ +E+ AR
Sbjct: 822 IISG-LSEAGKLSEVHTIFVELQQKTSESAARH 853
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 6/186 (3%)
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
+ S L+A C +FD A K+ M+ + +N ++NV+ G C G ++A
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRE-----RGCGLNTVTYNVLIAGLCRSGAVEEAFGF 279
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
+ M +Y PD ++ LI+ LCK+ EA+ L EMS + P+ Y L+D
Sbjct: 280 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 339
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDAS 265
D+ ++MV +G++PN Y+ LV L ++G +D A MV+ + D +
Sbjct: 340 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 399
Query: 266 YKFMMK 271
Y +++
Sbjct: 400 YNLIIE 405
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 129/318 (40%), Gaps = 46/318 (14%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y+ L+ G R G + F +++++ G+V DG YG+L+ G
Sbjct: 251 RGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDY--GLVPDGFTYGALING------- 301
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
LC + + +EA L D M P N
Sbjct: 302 ------------------------------LCKSRRSNEAKALLDEMSCAELKP-----N 326
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + + DG+ +G +A ++ ++M P+ ++++NL+ LCK G + A L
Sbjct: 327 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK 386
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M PD TY L+++ F + D +M ++G+ PN+ Y+ ++ L Q G
Sbjct: 387 QMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG 446
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++A + M K LK + Y ++ G + EI + +
Sbjct: 447 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYN 506
Query: 303 EFVKGELSKEGREEEVVK 320
+ G LSK GR EE K
Sbjct: 507 SLIFG-LSKVGRVEESTK 523
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 107/287 (37%), Gaps = 63/287 (21%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ KG V + V Y+ L+ G + GD F L+ E+ G+ D VY L G
Sbjct: 703 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT--GITPDAFVYSVLTTGCSSA 760
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+AM E + S + N+++D C GK E LKL
Sbjct: 761 GDLEQAMFLIEEMFLRGHA---SISSFNNLVDGFCKRGKMQETLKLLHV----------- 806
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+M G P+ L+ N+I L + G L+E
Sbjct: 807 --------IMGRGLV---------------------PNALTIENIISGLSEAGKLSEVHT 837
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ E+ K + ++ F M++ G P L V + ++
Sbjct: 838 IFVELQQKTSESAARHF----------------SSLFMDMINQGKIP-LDVVDDMIRDHC 880
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+ G LD+A D++V K M +SY ++ L GKL E L ++
Sbjct: 881 KEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLL 927
>gi|218188821|gb|EEC71248.1| hypothetical protein OsI_03217 [Oryza sativa Indica Group]
Length = 571
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 155/348 (44%), Gaps = 24/348 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG--DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF 58
M GF Y+ L+ D D R+F + + D Y +++ G
Sbjct: 164 MRAAGFAPTTATYNVLVKAHCSDAAVPIDDAVRVFRNIPKP------DACSYNTVIDGLC 217
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+G EA + + E + ++ + V +++ L FD+ALKLFD M +
Sbjct: 218 RRGRLPEARDLFAEMIANGTAP--TVVTYTTLIHWLAREACFDDALKLFDEMAR-----R 270
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ N+ +++ + DG C GR A+E+ +M + R P+T++++++ID LCK G L +A
Sbjct: 271 GIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQA 330
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN---LAVYNRL 235
E+ M +G PD +G L+ + R + + Y +M +G+RPN +++ R+
Sbjct: 331 MEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEMNFAGIRPNRLTWSLHGRI 390
Query: 236 ----VGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
V L G + A + M + + ++ +++ LS L++ +V +L
Sbjct: 391 NDAVVTALCSKGEVVRAFQVYQSMRTRGISTKPTTFHLLVECLSKKNNLEKAAHVVRDML 450
Query: 291 DDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAE 338
+ I E V+ SK+ + V + E +K+ AK E
Sbjct: 451 SERCIPERETWDTIVRAYWSKK-KLRAVGSVQEYNHEKKSTAKISSIE 497
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 156/316 (49%), Gaps = 13/316 (4%)
Query: 12 VYSY-LMLGFV-RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMEC 69
V++Y +M+ ++ ++GD + LF ++KE G D V Y SL+ G+ G+ +E + C
Sbjct: 255 VFTYNIMIDYLCKEGDLEMARSLFTQMKE--AGFTPDIVTYNSLIDGHGKLGLLDECI-C 311
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
E + +++ + N++++ C + +A + MK P N+ +++
Sbjct: 312 IFEQM-KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKP-----NVVTYST 365
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
D +C +G ++AI+ F M +P+ ++ +LID CK G LAEA +L E+ G
Sbjct: 366 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 425
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ + TY L+D E R+ + FR M+++G+ PN Y LV ++ ++ AK
Sbjct: 426 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 485
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGE 308
M +K +K D Y ++ L + +L+E ++G I + GI + + +
Sbjct: 486 DILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI-KESGINTNAVIYTTLMDA 544
Query: 309 LSKEGREEEVVKLMEK 324
K G+ E + L+E+
Sbjct: 545 YFKSGQATEALTLLEE 560
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 10/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + Y+ L+ GF++ + + + +E+KEK + D ++YG+++ G +
Sbjct: 456 MLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC--IKPDLLLYGTILWGLCNE 513
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA E + S + +AV +++DA +G+ EAL L + M + L
Sbjct: 514 SRLEEAKLLIGEI--KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD-----LGL 566
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C G ++A+ F +M E P+ + L+D LCKN A++
Sbjct: 567 IATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKK 626
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM DKG+ PD+ Y L+D + + + +M++ G+ +L Y L+ L
Sbjct: 627 LFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLS 686
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEI 285
G + +A++ D M+ K + D+ Y ++K GK+DE LE+
Sbjct: 687 HSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL 732
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 9/270 (3%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
V+ +L GM EEA EC+ + V + N++L L G+ D + K F
Sbjct: 187 VFDALFSALIELGMLEEASECFLKM--RKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFK 244
Query: 109 RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
M + ++ ++N+M D C +G + A +F +M E +PD +++N+LID
Sbjct: 245 DMG-----AAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 299
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
K G+L E ++ +M D +PD TY L++ + R+ + +M +GL+PN
Sbjct: 300 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPN 359
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
+ Y+ + + GML EA FF D+ L ++ +Y ++ A G L E L++V
Sbjct: 360 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 419
Query: 288 GILDDGGIEFSEELQEFVKGELSKEGREEE 317
IL GI+ + + L +EGR +E
Sbjct: 420 EIL-QAGIKLNVVTYTALLDGLCEEGRMKE 448
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 8/254 (3%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
+ +K S N ++D LC G + A LF +MK P ++ ++N + DG+
Sbjct: 249 AGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTP-----DIVTYNSLIDGHGKL 303
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G + I +F +M + C PD +++N LI+ CK + +A E EM G+ P+ TY
Sbjct: 304 GLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTY 363
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMV 256
+DA + + + +F M L PN Y L+ + G L EA +I+
Sbjct: 364 STFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQ 423
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
+K++ +Y ++ L + G++ E E+ +L+ G E V G + + +E
Sbjct: 424 AGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFI--KAKEM 481
Query: 317 EVVKLMEKKEREKA 330
E K + K+ +EK
Sbjct: 482 EYAKDILKEMKEKC 495
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 144/314 (45%), Gaps = 11/314 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D V Y+ L+ G + G D +FE++K+ D + Y +L+ +
Sbjct: 285 GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD--ADCDPDVITYNALINCFCKFERMP 342
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E +E + + +K + V ++ +DA C G EA+K F M+ P N
Sbjct: 343 KAFEFLHEM--KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTP-----NE 395
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + D C G +A+++ ++ + + +++ L+D LC+ G + EAEE++
Sbjct: 396 FTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRA 455
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + GV P++ TY L+ + ++ ++M + ++P+L +Y ++ L
Sbjct: 456 MLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESR 515
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L+EAK +I + + Y +M A G+ E L ++ +LD G I
Sbjct: 516 LEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCA 575
Query: 304 FVKGELSKEGREEE 317
+ G L K G +E
Sbjct: 576 LIDG-LCKSGLVQE 588
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 146/367 (39%), Gaps = 91/367 (24%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y+ L+ F + F E+K G+ + V Y + + + +GM +EA++
Sbjct: 324 DVITYNALINCFCKFERMPKAFEFLHEMKA--NGLKPNVVTYSTFIDAFCKEGMLQEAIK 381
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + ++ + S++DA C G EALKL + + + +N+ ++
Sbjct: 382 FFVDM--RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQ-----AGIKLNVVTYT 434
Query: 129 VMADGYCGQGRFKDAIEVFRKM------------------------GEY----------R 154
+ DG C +GR K+A EVFR M EY +
Sbjct: 435 ALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 494
Query: 155 C-SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
C PD L + ++ LC L EA+ L GE+ + G+N + Y LMDA F+ + +
Sbjct: 495 CIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEA 554
Query: 214 AT-----------------------------------YFRKMVDSGLRPNLAVYNRLVGK 238
T +F +M + GL+PN+AVY LV
Sbjct: 555 LTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDG 614
Query: 239 LVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG----GKLDEILEIVGGILDDGG 294
L + + AK FD M+ K M D K AL DG G L E L L D
Sbjct: 615 LCKNNCFEVAKKLFDEMLDKGMMPD---KIAYTALIDGNMKHGNLQEALN-----LRDRM 666
Query: 295 IEFSEEL 301
IE EL
Sbjct: 667 IEIGMEL 673
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 116/255 (45%), Gaps = 9/255 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K D ++Y ++ G + + L E+KE G+ ++ V+Y +LM YF G
Sbjct: 494 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKE--SGINTNAVIYTTLMDAYFKSGQA 551
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA+ E + + + + V +++D LC +G EA+ F RM P N
Sbjct: 552 TEALTLLEEML--DLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQP-----N 604
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + + DG C F+ A ++F +M + PD +++ LID K+G L EA L
Sbjct: 605 VAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRD 664
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + G+ D + Y L+ +V +M+ G+ P+ VY L+ K +G
Sbjct: 665 RMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALG 724
Query: 244 MLDEAKSFFDIMVKK 258
+DEA + M K+
Sbjct: 725 KVDEALELQNEMAKR 739
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V+Y+ LM + + G + L EE+ + G+++ V Y +L+ G G+ +
Sbjct: 530 GINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDL--GLIATEVTYCALIDGLCKSGLVQ 587
Query: 65 EAMECYNEAVGENSSVKM--SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EAM + G S + + + +++D LC N F+ A KLFD M ++ P ++A
Sbjct: 588 EAMHHF----GRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIA- 642
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ + DG G ++A+ + +M E D ++ LI L +G + +A L
Sbjct: 643 ----YTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLL 698
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
EM KGV PDE Y L+ + + +VD+ +M G+ L+
Sbjct: 699 DEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLS 746
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 3/168 (1%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+VL L + + +FD + N G F+ + G ++A E F
Sbjct: 152 NAVLKELICLRRVLPSWDVFDLLWATRNV---CVPGFGVFDALFSALIELGMLEEASECF 208
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
KM ++R P S N L+ +L K G + + + +M G+ +TY +++D +
Sbjct: 209 LKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKE 268
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
++ + F +M ++G P++ YN L+ ++G+LDE F+ M
Sbjct: 269 GDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 316
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 110/279 (39%), Gaps = 25/279 (8%)
Query: 139 RFKDAIEVFRKMGEYR--CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
R + +VF + R C P F+ L L + GML EA E + +M V P +
Sbjct: 163 RVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRS 222
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
L+ +V R D +F+ M +G++ ++ YN ++ L + G L+ A+S F M
Sbjct: 223 CNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMK 282
Query: 257 KK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI----LDDGGIEFSEELQEFVK----- 306
+ D +Y ++ G LDE + I + D I ++ + F K
Sbjct: 283 EAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMP 342
Query: 307 ------GELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAAIASLIPSKFG 360
E+ G + VV +A +E EA K +L P++F
Sbjct: 343 KAFEFLHEMKANGLKPNVVTY-----STFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT 397
Query: 361 DKVGGTEMADNANANEAASVAE--AQAGKEVNLEEATAV 397
N EA + E QAG ++N+ TA+
Sbjct: 398 YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 436
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 159/353 (45%), Gaps = 36/353 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D + Y+ L+ RD +L +E++++ G D V Y L+ G +
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDR--GCTPDVVTYNVLVNGICKE 287
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA++ N+ +S + + + +N +L ++C+ G++ +A KL M + P +
Sbjct: 288 GRLDEAIKFLNDM--PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 121 AVN-----------LG-------------------SFNVMADGYCGQGRFKDAIEVFRKM 150
N LG S+N + G+C + + AIE +M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
C PD +++N ++ LCK+G + +A E+ ++S KG +P TY ++D + +
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+M L+P+ Y+ LVG L + G +DEA FF + ++ + ++ +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSI 525
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
M L + D ++ + +++ G ++G L+ EG +E ++L+
Sbjct: 526 MLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEG-LAYEGMAKEALELL 577
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 146/320 (45%), Gaps = 14/320 (4%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
FV + V + + VR G+ + F+ E + G V D + +L++G+ G +
Sbjct: 98 FVLEDVESNNHLRQLVRTGELEEGFKFLENMVYH--GNVPDIIPCTTLIRGFCRMGKTRK 155
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A + V E S + N ++ C G+ + AL + DRM ++ ++
Sbjct: 156 AAKILE--VLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS--------VSPDVV 205
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + C G+ K A+EV +M + C PD +++ LI+ C++ + +A +L EM
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM 265
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG-M 244
D+G PD TY +L++ + R+D+ + M SG +PN+ +N ++ + G
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 245 LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
+D K D++ K ++ ++ L G L ++I+ + G S
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPL 385
Query: 305 VKGELSKEGREEEVVKLMEK 324
+ G KE + + ++ +E+
Sbjct: 386 LHG-FCKEKKMDRAIEYLER 404
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 39/291 (13%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------------------- 117
NSS + V +N+ L L G+ +E K + M N P
Sbjct: 95 NSSFVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTR 154
Query: 118 ---KRLAVNLGS--------FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
K L V GS +NVM GYC G +A+ V +M SPD +++N ++
Sbjct: 155 KAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTIL 211
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
LC +G L +A E+ M + PD TY +L++A + V +M D G
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCT 271
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
P++ YN LV + + G LDEA F D+ + + ++ +++++ G+ + ++
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 286 VGGILDDGGIEFSEELQEF--VKGELSKEGREEEVVKLMEKKEREKAEAKA 334
+ +L G FS + F + L ++G + ++EK + + +
Sbjct: 332 LADMLRKG---FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNS 379
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 120/265 (45%), Gaps = 9/265 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF V ++ L+ R G + E++ + G + + Y L+ G+ +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKH--GCQPNSLSYNPLLHGFCKE 392
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ A+E V + V N++L ALC +GK ++A+++ +++ ++ P
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDI--VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV-- 448
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
L ++N + DG G+ AI++ +M PDT+++++L+ L + G + EA +
Sbjct: 449 ---LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ E GV P+ T+ +M + + D + M++ G +P Y L+ L
Sbjct: 506 FFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLA 565
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDAS 265
GM EA + + K M +S
Sbjct: 566 YEGMAKEALELLNELCNKGLMKRSS 590
>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 811
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 131/263 (49%), Gaps = 10/263 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V + L+ GF + G+ D F LF+ ++++ G+ D + Y +L+ GYF GM + +
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQR--GIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
++A+ + VK+ V +S +D +G A ++ RM + P N+ ++ ++
Sbjct: 345 SQAL--HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP-----NVVTYTIL 397
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C GR +A ++ ++ + P +++++LID CK G L LY +M G
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD YG+L+D + + + KM+ +R N+ V+N L+ ++ DEA
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 251 FFDIM-VKKLKMDDASYKFMMKA 272
F +M + +K D A++ +M+
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRV 540
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 146/350 (41%), Gaps = 76/350 (21%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V YS L+ GF + G+ F L+E++ + G D V+YG L+ G +G+
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM--GYPPDVVIYGVLVDGLSKQGLM 477
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------------ 111
AM + +G+ S++++ V NS++D C +FDEALK+F M
Sbjct: 478 LHAMRFSVKMLGQ--SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 112 ------------NEHNPPK------------RLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+H P +++ ++ NV+ R +DA + F
Sbjct: 536 TVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 595
Query: 148 RKMGEYRCSPDTLSFNN-----------------------------------LIDQLCKN 172
+ E + PD +++N LI LCKN
Sbjct: 596 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 655
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
+ A ++ M++KG P+ TYG LMD + ++ F +M + G+ P++ Y
Sbjct: 656 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 715
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDE 281
+ ++ L + G +DEA + F + KL D +Y +++ G+L E
Sbjct: 716 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVE 765
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 9/219 (4%)
Query: 41 GGVVSDGV-VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK 99
GG+ GV +G ++ F KG +A++ ++ V E ++ V+ N VL L + +
Sbjct: 210 GGIEPSGVSAHGFVLDALFCKGEVTKALD-FHRLVMERG-FRVGIVSCNKVLKGLSVD-Q 266
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
+ A +L + + P N+ +F + +G+C +G A ++F+ M + PD
Sbjct: 267 IEVASRLLSLVLDCGPAP-----NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
++++ LID K GML +L+ + KGV D + +D + + + +++
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
M+ G+ PN+ Y L+ L Q G + EA + ++K+
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN----EAVGENSSVKMSAVA 86
+ F L E G + D V Y +++ GY +EA + G N+ V
Sbjct: 593 KFFNNLIE--GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT------VT 644
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
++ LC N D A+++F M + + P N ++ + D + + + ++
Sbjct: 645 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKP-----NAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F +M E SP +S++ +ID LCK G + EA ++ + D + PD Y +L+ +
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 759
Query: 207 VNRVDDGATYFRKMVDSGLRPN 228
V R+ + A + M+ +G++P+
Sbjct: 760 VGRLVEAALLYEHMLRNGVKPD 781
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 44/192 (22%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V F + V + L+ ++ D DG R+F + EK G + V YG LM +F K +
Sbjct: 635 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK--GSKPNAVTYGCLMD-WFSKSV 691
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+ E + KLF+ M+ + P
Sbjct: 692 DIEG------------------------------------SFKLFEEMQEKGISP----- 710
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ S++++ DG C +GR +A +F + + + PD +++ LI CK G L EA LY
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 770
Query: 183 GEMSDKGVNPDE 194
M GV PD+
Sbjct: 771 EHMLRNGVKPDD 782
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 18/131 (13%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y LM F + D +G F+LFEE++EK G+ V Y ++ G +G
Sbjct: 671 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK--GISPSIVSYSIIIDGLCKRGRV 728
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM------------- 110
+EA +++A+ ++ + VA ++ C G+ EA L++ M
Sbjct: 729 DEATNIFHQAI--DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQR 786
Query: 111 -KNEHNPPKRL 120
+E+NPPK L
Sbjct: 787 ALSEYNPPKWL 797
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 160/329 (48%), Gaps = 25/329 (7%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
D + + L+ G + G D ++++E++ + ++ +VY SL+K +F G +E+
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKIYEKMLD--SDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ Y + V +N S + + N+ +D + G+ ++ +F+ +K+ +R + S
Sbjct: 502 HKIYKDMVNQNCSPDLQLL--NTYMDCMFKAGEPEKGRAMFEEIKS-----RRFVPDARS 554
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
++++ G G + E+F M E C DT ++N +ID CK G + +A +L EM
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
KG P TYG ++D +++R+D+ F + + N+ +Y+ L+ +VG +D
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 247 EAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEIL--------------EIVGGILD 291
EA ++M K L + ++ ++ AL +++E L ++ GIL
Sbjct: 675 EAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 292 DGGIEFSEELQEFV-KGELSKEGREEEVV 319
+G + + + FV E+ K+G + +
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 139/280 (49%), Gaps = 18/280 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+ FV D YS L+ G ++ G ++ + LF +KE+ G V D Y ++ G+ G
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ--GCVLDTRAYNIVIDGFCKCGKV 603
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + E + + + V SV+D L + DEA LF+ K+ KR+ +N
Sbjct: 604 NKAYQLLEEM--KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS-----KRIELN 656
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + DG+ GR +A + ++ + +P+ ++N+L+D L K + EA +
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 716
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + P++ TYG+L++ +V + + ++++M G++P+ Y ++ L + G
Sbjct: 717 SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Query: 244 MLDEAKSFFDIMVKKLKM-----DDASYKFMMKALSDGGK 278
+ EA + FD + K D A Y M++ LS+G +
Sbjct: 777 NIAEAGALFD----RFKANGGVPDSACYNAMIEGLSNGNR 812
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 10/254 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ + D +FE L++ V Y +++ GY G +
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK--NRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + S S +A N +L L GK DEAL++F+ MK + P NL
Sbjct: 326 EAYSLLERQRAKGSIP--SVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAP------NL 377
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ D C G+ A E+ M + P+ + N ++D+LCK+ L EA ++ +
Sbjct: 378 STYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQ 437
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M K PDE T+ L+D +V RVDD + KM+DS R N VY L+ G
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 245 LDEAKSFFDIMVKK 258
++ + MV +
Sbjct: 498 KEDGHKIYKDMVNQ 511
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 148/317 (46%), Gaps = 14/317 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P Y+Y +++G+ G D + L E + K G + + Y ++ G +EA+
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK--GSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E + ++++ +S N ++D LC GK D A +L D M+ P N+ +
Sbjct: 364 RVFEE-MKKDAAPNLSTY--NILIDMLCRAGKLDCAFELRDSMQKAGLFP-----NVRTV 415
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N+M D C + +A +F +M C+PD ++F +LID L K G + +A ++Y +M D
Sbjct: 416 NIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLD 475
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+ Y L+ F R +DG ++ MV+ P+L + N + + + G ++
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 248 AKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
++ F +I ++ D SY ++ L G +E E+ + + G + + +
Sbjct: 536 GRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 595
Query: 307 GELSKEGREEEVVKLME 323
G K G+ + +L+E
Sbjct: 596 G-FCKCGKVNKAYQLLE 611
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 136/286 (47%), Gaps = 13/286 (4%)
Query: 9 DPVV--YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+P V ++ L+ GF ++G D L +E+K + +D V+Y + + G + A
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS--SSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ ++E E + +K V S++ LC + DEA+++F+ ++ P A
Sbjct: 258 WKFFHEI--EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA----- 310
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N M GY G+F +A + + P +++N ++ L K G + EA ++ EM
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK 370
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
K P+ TY +L+D ++D M +GL PN+ N +V +L + LD
Sbjct: 371 -KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
EA + F+ M K D+ ++ ++ L G++D+ +I +LD
Sbjct: 430 EACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLD 475
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 137/292 (46%), Gaps = 11/292 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D Y+ ++ GF + G + ++L EE+K K G V YGS++ G
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK--GFEPTVVTYGSVIDGLAKIDRL 638
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + EA ++ ++++ V +S++D G+ DEA + + + K L N
Sbjct: 639 DEAYMLFEEA--KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ-----KGLTPN 691
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + D +A+ F+ M E +C+P+ +++ LI+ LCK +A +
Sbjct: 692 VYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +G+ P +Y ++ + + + F + +G P+ A YN ++ L
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+A S F+ ++ L + + + ++ L L++ IVG +L + G
Sbjct: 812 RAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQA-AIVGAVLRETG 862
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 9/226 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF V Y ++ G + D + LFEE K K + + V+Y SL+ G+
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK--RIELNVVIYSSLIDGFGKV 670
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA E + + + NS+LDAL + +EAL F MK P ++
Sbjct: 671 GRIDEAYLILEELM--QKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ +G C +F A +++M + P T+S+ +I L K G +AEA
Sbjct: 729 -----TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
L+ G PD Y +++ NR D + F + GL
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLH 829
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 6/186 (3%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
D L LF +M+ P V+L F + G+ +GR A+ + +M D +
Sbjct: 185 DMMLTLFQQMQELGYEP---TVHL--FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+N ID K G + A + + E+ G+ PDE TY ++ + NR+D+ F +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKL 279
+ P YN ++ G DEA S + K + +Y ++ L GK+
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 280 DEILEI 285
DE L +
Sbjct: 360 DEALRV 365
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ +F++M E P F LI K G + A L EM ++ D Y + +D+
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMD- 262
+V +VD +F ++ +GL+P+ Y ++G L + LDEA F+ + K ++
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+Y M+ GK DE ++ G I S + L K G+ +E +++
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP-SVIAYNCILTCLRKMGKVDEALRVF 366
Query: 323 EKKEREKA 330
E+ +++ A
Sbjct: 367 EEMKKDAA 374
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 139 RFKD---AIEVFR---KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
R KD AIE FR + E P+ S+N+L+ + + +++ GEMS G P
Sbjct: 74 RLKDVNRAIEYFRWYERRTELPHCPE--SYNSLLLVMARCRNFDALDQILGEMSVAGFGP 131
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
T ++ +C + N++ +G + M RP + Y L+G V D + F
Sbjct: 132 SVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 253 DIMVKKLKMDDASYKF--MMKALSDGGKLDEILEIV 286
M ++L + + F +++ + G++D L ++
Sbjct: 192 QQM-QELGYEPTVHLFTTLIRGFAKEGRVDSALSLL 226
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 146/321 (45%), Gaps = 13/321 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ +LG+ R G R+F + L G + Y +L+ G GM
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP--LRGCLRTAFTYTALLHGLLGAGMVR 159
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK-FDEALKLFDRMKNEHNPPKRLAVN 123
EAM + ++ + A +++ LC G+ + + L + M N P N
Sbjct: 160 EAMTVFVGMRADSCAPDTHVYA--TMVHGLCEAGRTEEAEVLLEEAMSNGFEP------N 211
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +N + DGYC G + A++VF M RCSP+ ++ LI LCK+G + A L+
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + G+ P+ TY L+ + M +GL PN ++ L+ L +
Sbjct: 272 RMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKRE 331
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++EA+ F +VKK +K+++ Y ++ L GK+D E++ ++ +G + +
Sbjct: 332 KVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYS 391
Query: 303 EFVKGELSKEGREEEVVKLME 323
+ G L ++ + + ++E
Sbjct: 392 SLIDG-LCRQKKLSQATLMLE 411
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 134/282 (47%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ L+ G +G FRL ++ G+V + + L+ + E
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETN--GLVPNDWTFSVLIDALCKREKVE 334
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA V + VK++ V S++D LC GK D A +L +M +E P +
Sbjct: 335 EAQLFLGSLVKKG--VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP-----DA 387
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S++ + DG C Q + A + M E +++ +ID+L + ++++ +
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK 447
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G+NPD TY + + + E R++D + +MVD G+ PNL YN L+ +G+
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ +A S F++MV K K ++ SY +++ + D ++I
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 94/238 (39%), Gaps = 11/238 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N++L AL + F + L RM P R NL ++ + + YC G A +
Sbjct: 45 NTLLMALARHRMFPDMESLASRM------PAR---NLRTYTTLINAYCLAGDIPAAKQHL 95
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ +PD+ ++ + + C+ GML A ++ M +G +TY L+
Sbjct: 96 TSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGA 155
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG-MLDEAKSFFDIMVKKLKMDDASY 266
V + T F M P+ VY +V L + G + + M + + Y
Sbjct: 156 GMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVY 215
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ + G+++ L++ G+ + E + G L K G+ E + L +
Sbjct: 216 NALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHG-LCKSGKVERAMVLFSR 272
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 13/212 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG A PV Y+ ++ VR+ S+G ++F+++ G+ D V Y ++ Y +
Sbjct: 413 MMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIAT--GINPDIVTYTVFVRSYCEE 470
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-- 118
G E+A + V + V + V N+++ N G +A F+ M + P
Sbjct: 471 GRMEDAESMIVQMV--DRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNED 528
Query: 119 ------RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
RL V S + D + KD + + E + ++ I LC+
Sbjct: 529 SYTVLLRLVVKKSSSDNSVDIW-KIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRV 587
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
L EA+ + M + + P E Y ++D C
Sbjct: 588 DRLEEAKHFFMGMQNANLTPSEDVYTSIIDCC 619
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 10/273 (3%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+ A ++ LM F ++G+ +F+ + + G+ V + +LM GY G +E
Sbjct: 132 YPASLYFFNILMDRFCKEGEIRLAQSVFDGITK--WGLRPSVVSFNTLMNGYIKLGDLDE 189
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
++ S V+ + +++ LC K DEA KLFD M + + L N
Sbjct: 190 GFRL--KSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLD-----RGLVPNGV 242
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+F + DG+C G+ A+E++++M SPD +++N LI LCK G L +A++L EM
Sbjct: 243 TFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEM 302
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM- 244
S KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L + G
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRS 362
Query: 245 LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK D +Y +M G
Sbjct: 363 VDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNG 395
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 9/227 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D +LF+E+ ++ G+V +GV + +L+ G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDR--GLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + + S + N+++ LC G +A L D M + P ++
Sbjct: 255 GKLDLAMEIYKQMLSQGFSP--DXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +S+ LI LCK G +AE+
Sbjct: 313 -----TYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
+ EM G+ PD TY ++M + V G+ ++M G P
Sbjct: 368 MLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVP 414
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 8/251 (3%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
+F + E G SD V+ L+ Y G +A+EC+ V VL
Sbjct: 51 VFATILETKGAQRSDIYVFSGLITAYLESGFLRDAIECFRLTRENKYWVPFDTC--RKVL 108
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ L F + + P +L FN++ D +C +G + A VF +
Sbjct: 109 EHLMKLKYFKLVWSFYKEILECRYP-----ASLYFFNILMDRFCKEGEIRLAQSVFDGIT 163
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
++ P +SFN L++ K G L E L M GV PD YTY +L++ + +++D
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMD 223
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ F +M+D GL PN + L+ + G LD A + M+ + D +Y ++
Sbjct: 224 EAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLI 283
Query: 271 KALSDGGKLDE 281
L G L +
Sbjct: 284 YGLCKKGDLXQ 294
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 146/312 (46%), Gaps = 35/312 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + + Y+ ++ G R+G + + EE+ K G D V Y +L+ GY +
Sbjct: 275 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK--GFTPDEVTYNTLLNGYCKE 332
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEH 114
G +A+ + E V + V S V ++++++C + A++ FD+M+ NE
Sbjct: 333 GNFHQALVIHAEMV--RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 390
Query: 115 ---------------NPPKRL---------AVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
N R+ + ++ ++N G+C R ++A+ V ++M
Sbjct: 391 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 450
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E +PD +S++ +I C+ G L A ++ EM +KGV+PD TY L+ E+ R+
Sbjct: 451 VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 510
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFM 269
+ ++M+D GL P+ Y L+ G L++A D M+ K + DA +Y +
Sbjct: 511 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVL 570
Query: 270 MKALSDGGKLDE 281
+ L+ + E
Sbjct: 571 INGLNKQARTRE 582
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 8/263 (3%)
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A E Y E + S V + N ++ C+ G+ + L F M+ P N+
Sbjct: 198 AEEVYREMI--RSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLP-----NVV 250
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + D YC GR +A + + M P+ +S+N +I+ LC+ G + EA E+ EM
Sbjct: 251 TYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 310
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
KG PDE TY L++ + +MV +G+ P++ Y L+ + + L
Sbjct: 311 GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 370
Query: 246 DEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
+ A FFD M ++ L+ ++ +Y ++ S G L+E I+ + + G F
Sbjct: 371 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 430
Query: 305 VKGELSKEGREEEVVKLMEKKER 327
+ G E EE + + E E+
Sbjct: 431 IHGHCVLERMEEALGVVQEMVEK 453
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 153/358 (42%), Gaps = 29/358 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G + Y+ L+ GF R G + +R+ E+ E G V Y + + G+ +
Sbjct: 380 MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTE--SGFSPSVVTYNAFIHGHCVL 437
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA+ E V + V+ ++++ C G+ D A ++ M + P +
Sbjct: 438 ERMEEALGVVQEMV--EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAV 495
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ + G C R +A ++ ++M + PD ++ LI+ C G L +A
Sbjct: 496 -----TYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 550
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM KG PD TY +L++ + R + K++ P+ Y+ L+
Sbjct: 551 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 610
Query: 241 QV---------------GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILE 284
+ G++ EA F+ MV++ K +A Y ++ GG L +
Sbjct: 611 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 670
Query: 285 IVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEA 342
+ ++ G + + + +K L KEG EE+ +++ R + EAE A+
Sbjct: 671 LYKEMIHSGFVPHTVTVITLIKA-LFKEGMNEEMSEVIGDTLR---SCRLNEAELAKV 724
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 9/242 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ R GD G+ LF ++K K G+VS+ + Y L++ G E+ + Y
Sbjct: 238 VTYNSLLSSLGRKGDIQGLMELFGQMKAK--GLVSNELTYAILIERLGWAGRVEDVWQLY 295
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E V ++ +K V N+VLD L G+ + A +LF MK K L + ++N++
Sbjct: 296 LEMV--DNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKF-----KGLNADTVTYNIL 348
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+G G+ A + +M E C+P+ +++N LI K L+ A L+ EM ++GV
Sbjct: 349 INGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGV 408
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ +Y L++ + R D + FR+M G PN YN L+ L++ G A
Sbjct: 409 APNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAME 468
Query: 251 FF 252
+
Sbjct: 469 YL 470
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+++ M + G ++ + ++++M + + PD +FN LID L K + EA ++G+M
Sbjct: 67 TYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDM 126
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
V+PD YTY +L+ + + R+D F M G +PNL Y+ ++ G +
Sbjct: 127 FKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRV 186
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
DEA F MV+K L+ D +Y ++ A G+L+ + VG F+ E+
Sbjct: 187 DEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVG-----KSRSFTNEVT-- 239
Query: 305 VKGELSKEGREEEVVKLMEKKEREKAE 331
LS GR+ ++ LME + KA+
Sbjct: 240 YNSLLSSLGRKGDIQGLMELFGQMKAK 266
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 132/286 (46%), Gaps = 13/286 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + Y +M F G D +F+++ +K G+ D V Y L+ +
Sbjct: 161 MTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQK--GLQPDAVTYNILIDAFGKT 218
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A + VG++ S + V NS+L +L G ++LF +MK K L
Sbjct: 219 GQLERAFDF----VGKSRSFT-NEVTYNSLLSSLGRKGDIQGLMELFGQMK-----AKGL 268
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++ ++ + GR +D +++ +M + D ++ NN++D L K G + A E
Sbjct: 269 VSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFE 328
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ +M KG+N D TY +L++ ++D +M ++G PN+ YN L+
Sbjct: 329 LFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYG 388
Query: 241 QVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ L A + F ++ + + + SY +++ G+ D + +
Sbjct: 389 KWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISL 434
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
R+ D + M + R DT FN LI + M+ +A + + +G P YTY
Sbjct: 10 RYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYS 69
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK- 257
++ + V +G +++M+ + P+ +N L+ L + ++EA + F M K
Sbjct: 70 SMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKL 129
Query: 258 KLKMDDASYKFMMKALSDGGKLDEILEI 285
+ D +Y ++++L G++D ++++
Sbjct: 130 NVSPDVYTYTILIRSLGTIGRIDAVMKL 157
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 147/348 (42%), Gaps = 36/348 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V++ L+ + R G D +FE+++ K G++ D V + +++
Sbjct: 393 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK--GMIPDTVTFATVISSLCRI 450
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-- 118
G ++A+ +N V + V S ++ CN+G+ +A +L M N+ PP
Sbjct: 451 GRLDDALHKFNHMV--DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 508
Query: 119 --------------RLA---------------VNLGSFNVMADGYCGQGRFKDAIEVFRK 149
R+A N+ +FN + +GYC G ++A +
Sbjct: 509 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 568
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M P+ + L+D CKNG + +A ++ +M KGV P Y +++ F+ R
Sbjct: 569 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 628
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKF 268
F +M++SG ++ Y ++G L + DEA + + +K D ++
Sbjct: 629 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 688
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
++ A+ G+ E E+ I G + + + + +E EE
Sbjct: 689 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 736
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 13/261 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS ++ G + D R+ E++ E G + + Y SL+ GY +
Sbjct: 251 MVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE--AGTRPNSITYNSLIHGYSIS 308
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVAN-NSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
GM E++ + + +S + V N NS + AL +G+ +EA +FD M + P
Sbjct: 309 GMWNESVRVFKQM---SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKP-- 363
Query: 120 LAVNLGSFNVMADGYCG--QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
++ S++ M GY D +F M +P+ FN LI+ + GM+ +
Sbjct: 364 ---DIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 420
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A ++ +M +KG+ PD T+ ++ + + R+DD F MVD G+ P+ AVY L+
Sbjct: 421 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQ 480
Query: 238 KLVQVGMLDEAKSFFDIMVKK 258
G L +AK M+ K
Sbjct: 481 GCCNHGELVKAKELISEMMNK 501
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 141/294 (47%), Gaps = 31/294 (10%)
Query: 13 YSY-LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF-MKGMEEEAMECY 70
+SY L+ GFV+DG+ D LF E+ E+ GV+ ++ S++K MK M++
Sbjct: 192 FSYSLIYGFVKDGEVDKAHCLFLEMMEQ--GVLPKILICNSIIKELCKMKEMDKA----- 244
Query: 71 NEAVGE---NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E++ + +S + + ++D LC + D+A ++ ++M P + ++
Sbjct: 245 -ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSI-----TY 298
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + GY G + +++ VF++M P + N+ I L K+G EA+ ++ M
Sbjct: 299 NSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVL 358
Query: 188 KGVNPDEYTYGLLM-------DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
KG PD +Y ++ D+C D F M+ G+ PN V+N L+
Sbjct: 359 KGPKPDIISYSTMLHGYATATDSCLA-----DVHNIFNLMLTKGIAPNKHVFNILINAYA 413
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ GM+D+A F D+ K + D ++ ++ +L G+LD+ L ++D G
Sbjct: 414 RCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 467
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 120/318 (37%), Gaps = 76/318 (23%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + D V ++ ++ R G D F + + GV VYG L++G G
Sbjct: 431 KGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI--GVPPSEAVYGCLIQGCCNHGEL 488
Query: 64 EEAMECYNEAVGEN---------SSV-------------------------KMSAVANNS 89
+A E +E + ++ SS+ + + V NS
Sbjct: 489 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 548
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+++ C G +EA L D M + P N + + DGYC GR DA+ VFR
Sbjct: 549 LMEGYCLVGNMEEAFALLDAMASIGIEP-----NCYIYGTLVDGYCKNGRIDDALTVFRD 603
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG----------- 198
M P ++ ++ ++ L + A++++ EM + G +TYG
Sbjct: 604 MLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNC 663
Query: 199 ------------------------LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+++ A F+V R + F + GL PN+ Y+
Sbjct: 664 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSM 723
Query: 235 LVGKLVQVGMLDEAKSFF 252
++ L++ +EA + F
Sbjct: 724 MITNLIKEESYEEADNLF 741
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 111/245 (45%), Gaps = 9/245 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ LM G+ G+ + F L + + G+ + +YG+L+ GY G ++A+ +
Sbjct: 544 VTFNSLMEGYCLVGNMEEAFALLDAMASI--GIEPNCYIYGTLVDGYCKNGRIDDALTVF 601
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + VK ++V + +L L + A K+F M V++ ++ V+
Sbjct: 602 RDML--HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGT-----TVSIHTYGVV 654
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C +A + K+ D ++FN +I + K G EA+EL+ +S G+
Sbjct: 655 LGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGL 714
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ TY +++ + ++ F + SG + + N +V L+ + +A +
Sbjct: 715 VPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASN 774
Query: 251 FFDIM 255
+ I+
Sbjct: 775 YLSII 779
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 7/187 (3%)
Query: 143 AIEVFRKMGEYRC---SPDTL-SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
AIE+F++M + C SP T+ ++N LID + + G + G+ PD+++Y
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 195
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
L+ + VD F +M++ G+ P + + N ++ +L ++ +D+A+S MV
Sbjct: 196 LIYGFVKD-GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254
Query: 259 -LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+ D +Y ++ L +D+ ++ +++ G S + G S G E
Sbjct: 255 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG-YSISGMWNE 313
Query: 318 VVKLMEK 324
V++ ++
Sbjct: 314 SVRVFKQ 320
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 139/290 (47%), Gaps = 12/290 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V + +Y+ L + GD + +L E+ K GV+ D Y +L+ Y KGM
Sbjct: 191 GVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVK--GVLQDIFTYNTLLSLYCKKGMHY 248
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ N E + + V+ NS++ C G+ EA+++F +KN P N
Sbjct: 249 EALSIQNRM--EREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNA-TP------NH 299
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DGYC ++A+++ + M P +++N+++ +LC++G + +A +L E
Sbjct: 300 VTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNE 359
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS++ + D T L++A ++ + + KM+++GL+P+ Y L+ +
Sbjct: 360 MSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNE 419
Query: 245 LDEAKSF-FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L+ AK F ++ +Y +++ + +D +L + L G
Sbjct: 420 LESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRG 469
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 13/249 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ GF ++G R+F E+K + V Y +L+ GY E
Sbjct: 261 GINLDIVSYNSLIYGFCKEGRMREAMRMFSEIK----NATPNHVTYTTLIDGYCKTNELE 316
Query: 65 EAME-CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA++ C + E + V NS+L LC +G+ +A KL + M ++L +
Sbjct: 317 EALKMC---KLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSE-----RKLQAD 368
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ N + + YC G K A++ KM E PD ++ LI CK L A+EL
Sbjct: 369 NITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMF 428
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M D G P TY ++D + + +D + + G+ +++VY L+ +V
Sbjct: 429 SMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICLDVSVYRALIRSSCKVE 488
Query: 244 MLDEAKSFF 252
+ A+ F
Sbjct: 489 RIQCAERLF 497
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
VN + + Y +DAI+VF +M + P + L++ L K+G+ ++
Sbjct: 124 VNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKI 183
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
Y M GV P+ Y Y L AC + V+ +M G+ ++ YN L+ +
Sbjct: 184 YKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCK 243
Query: 242 VGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
GM EA S + M ++ + +D SY ++ G++ E + + I
Sbjct: 244 KGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEI 292
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 143/317 (45%), Gaps = 10/317 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + D VVY+ L+ GF + G + F+E+ K + D + Y +L++G+
Sbjct: 354 MMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSK--KISPDYITYTTLIQGFGQG 411
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E ++E + +K V +++D C G+ A L + M P
Sbjct: 412 GKVIEPQNLFHEMISR--GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP--- 466
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + DG C G A E+ +M + + +N++++ +CK G + +A +
Sbjct: 467 --NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM G++PD TY ++DA + +D ++M+D GL+P + +N L+
Sbjct: 525 LMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC 584
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+GML++ M++K + DA +Y +MK ++ +I + + G S
Sbjct: 585 MLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSN 644
Query: 300 ELQEFVKGELSKEGREE 316
+KG +E
Sbjct: 645 TYNILIKGHCKARNLKE 661
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 9/255 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + V Y L+ G + G+ D L +E+++K G+ + +Y S++ G
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK--GLQLNVCIYNSMVNGICKA 516
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+A++ E E + + A+ +V+DA C G D+A KL M + P
Sbjct: 517 GNIEQAIKLMKEM--EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP--- 571
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +FNV+ +G+C G +D + M E PD +++N L+ Q C + +
Sbjct: 572 --TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+Y M ++GV PD TY +L+ + + + +++M++ G P + YN L+ +
Sbjct: 630 IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFY 689
Query: 241 QVGMLDEAKSFFDIM 255
+ + EA+ F+ M
Sbjct: 690 KKKKILEARELFEEM 704
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ + + N ++ +LC GK EA +L +M + P ++ S++ + DGYC G
Sbjct: 254 ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTP-----DVVSYSTVIDGYCHLGE 308
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
K A+++ M P+ ++N++I LCK G EAE++ EM + + PD Y
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTT 368
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
L+ F++ V +F +M+ + P+ Y L+ Q G + E ++ F M+ +
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428
Query: 259 LKMDDASYKFMMKALSDGGKL 279
LK D+ +Y ++ G++
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEM 449
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ N S+N++ C G+ K+A + +M +PD +S++ +ID C G L +A
Sbjct: 254 ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKAL 313
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L +M KG+ P+ YTY ++ ++ + + R+M+ + P+ VY L+
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373
Query: 240 VQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDE 281
++G + A +FD M+ KK+ D +Y +++ GGK+ E
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIE 416
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 14/284 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D + Y+ L+ GF R G V +L E+ K + + + L+ + KG
Sbjct: 254 GIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNK--NINPNVYTFNVLIDAFCRKGKMI 311
Query: 65 EAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA +N V G+ + V N+++ C +G EA KLFD + P
Sbjct: 312 EAQGMFNLMVKRGQQPDI----VTFNTLISGHCLHGNVLEARKLFDTVFERGILP----- 362
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ S+ ++ GYC R +A+ +F +M D + +++LID LCK+G ++ A EL+
Sbjct: 363 DVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELF 422
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+++ G P+ TY +L+DA ++ +D G F+ M GL P + YN L+ +
Sbjct: 423 STINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKS 482
Query: 243 GMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ EA + +M K L D +Y + L G++ + E+
Sbjct: 483 KRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWEL 526
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 9/203 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+F +G + D Y+ L++G+ + D LF E++ K +V D V+Y SL+ G
Sbjct: 355 VFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCK--NMVLDIVLYSSLIDGLCKS 412
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A E ++ N + + N ++DA C D ++LF M + P L
Sbjct: 413 GRISYAWELFSTI--NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVL 470
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N++ +GYC R ++A+ + M +PD++++N+L D LCK+G +++A E
Sbjct: 471 -----TYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWE 525
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA 203
L+ M G D TY +L+DA
Sbjct: 526 LFKVMHVGGPPVDVATYNVLLDA 548
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 132/280 (47%), Gaps = 27/280 (9%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G + + ++MKG + G ++AM+ ++ + + + V ++++ LC G+
Sbjct: 149 GYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQ--GMLLDEVCYGTLINGLCKIGRSI 206
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A +L M+ + P N+ +N++ D +C A +++ K+ + PD L+
Sbjct: 207 DAFQLLQEMEGQVVKP-----NIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 261
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ +LI C+ G E ++L EM +K +NP+ YT+ +L+DA ++ + F MV
Sbjct: 262 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 321
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLD 280
G +P++ +N L+ G + EA+ FD + ++ + D SY ++ ++D
Sbjct: 322 KRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRID 381
Query: 281 E-------------ILEIV------GGILDDGGIEFSEEL 301
E +L+IV G+ G I ++ EL
Sbjct: 382 EAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWEL 421
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 18/272 (6%)
Query: 9 DPVVYSY--LMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+P VY++ L+ F R G ++ G+F L + ++ D V + +L+ G+ + G
Sbjct: 291 NPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ-----PDIVTFNTLISGHCLHGNV 345
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA + ++ + + ++ C + DEA+ LF+ M+ K + ++
Sbjct: 346 LEARKLFDTVF--ERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRC-----KNMVLD 398
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + DG C GR A E+F + P+ +++N LID CK + EL+
Sbjct: 399 IVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFK 458
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M KG+ P TY +L++ + R+ + M L P+ YN L L + G
Sbjct: 459 LMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSG 518
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALS 274
+ +A F +M V +D A+Y ++ A
Sbjct: 519 RISDAWELFKVMHVGGPPVDVATYNVLLDAFC 550
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/227 (18%), Positives = 104/227 (45%), Gaps = 14/227 (6%)
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+ +N + N S + N+++ ++ A+ L +M + P +
Sbjct: 66 DDAVTLFNHLI--NMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTP-----S 118
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + ++ + YC G A V + + P+ ++ ++ LC NG + +A + +
Sbjct: 119 IFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHD 178
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++ +G+ DE YG L++ ++ R D ++M ++PN+ +YN ++ +
Sbjct: 179 NVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDE 238
Query: 244 MLDEAKSFFDIMVKKLKM----DDASYKFMMKALSDGGKLDEILEIV 286
+ +A+ D+ +K + M D +Y +++ G+ E+ +++
Sbjct: 239 LTCKAR---DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLM 282
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 15/289 (5%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D V Y ++ G FM+G +A +NE V V + V NS++ ALC D
Sbjct: 267 GCSPDVVSYTMVIHGLFMEGEISKACNLFNEMV--QKGVVPNVVTYNSIVHALCKARAMD 324
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A + +M + P + ++ M GY GR+K+A ++F++M PD ++
Sbjct: 325 KAELVLRQMFDNSIQPDEV-----TYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVT 379
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
FN+L+D LCK+ EA E++ ++ KG PD +Y +L+ R D F M
Sbjct: 380 FNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMT 439
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLD 280
D+G+ + +N L+ + GM+DEA F M + + + +Y ++ AL G+L
Sbjct: 440 DNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLA 499
Query: 281 EILEIVGGILDDG----GIEFSEELQEF-VKGELSKEGREEEVVKLMEK 324
+ +E + ++ G + + +Q F G+L K +E V ++M++
Sbjct: 500 DAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKA--KELVSEMMDQ 546
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 143/314 (45%), Gaps = 10/314 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VAD ++ L+ + G D +F E++ + GV + V Y +++ G
Sbjct: 442 GIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQ--GVSPNVVTYATVIAALCRMGRLA 499
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+AME ++ + + +K + V +S++ C +G +A +L M ++ P N+
Sbjct: 500 DAMEKLSQMI--SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRP----NI 553
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
F+ + C +GR +A +VF + PD +FN+LID C G + +A +
Sbjct: 554 TFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDA 613
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G PD TY L++ F+ R+DDG FR+M+ ++P Y+ ++ L + G
Sbjct: 614 MVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGR 673
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
AK F M++ M ++Y +++ L DE + + L ++F +
Sbjct: 674 TSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHK-LGAMNLKFEIAILN 732
Query: 304 FVKGELSKEGREEE 317
+ L K R EE
Sbjct: 733 TMIHALYKVKRREE 746
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 9/249 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V + V Y+ ++ + D + ++ + + D V Y +++ GY
Sbjct: 298 MVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDN--SIQPDEVTYTAMIHGYSCL 355
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA + + E E + V NS++D+LC + + EA ++F + + + P
Sbjct: 356 GRWKEAAKMFKEMTREG--LIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKP--- 410
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S++++ GY +GRF D +F M + D+ FN LI+ K GM+ EA
Sbjct: 411 --DIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALL 468
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM +GV+P+ TY ++ A + R+ D +M+ GL+PN VY+ L+
Sbjct: 469 IFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFC 528
Query: 241 QVGMLDEAK 249
G L +AK
Sbjct: 529 THGDLIKAK 537
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 152/338 (44%), Gaps = 20/338 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDG-----VVYGSLMKGYF 58
+G + V Y+ ++ R G RL + + EKL ++S G VVY SL++G+
Sbjct: 476 QGVSPNVVTYATVIAALCRMG------RLADAM-EKLSQMISIGLKPNTVVYHSLIQGFC 528
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G +A E +E + + + + +S++ +LCN G+ A +F+ + + + P
Sbjct: 529 THGDLIKAKELVSEMMDQGIP-RPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRP- 586
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ +FN + DGYC G+ A V M PD ++++ LI+ K+G + +
Sbjct: 587 ----DIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDG 642
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
L+ EM K V P TY L++D F R F +M++SG +++ Y ++
Sbjct: 643 LILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQG 702
Query: 239 LVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
L + DEA + F + LK + A M+ AL + +E ++ + G +
Sbjct: 703 LCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPN 762
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAR 335
+ + L KEG EE + E+ +R
Sbjct: 763 ASTYGVMII-NLLKEGSVEEADIMFSSMEKTGCAPSSR 799
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 136/312 (43%), Gaps = 8/312 (2%)
Query: 41 GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF 100
G+ +DG+V + +K +EA+ + E V A + N+V+ +LC +
Sbjct: 194 AGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVP-DAFSYNTVIKSLCGGSRS 252
Query: 101 DEALKLFDRM-KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
EAL + RM K + P ++ S+ ++ G +G A +F +M + P+
Sbjct: 253 QEALDMLLRMTKGDGCSP-----DVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNV 307
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
+++N+++ LCK + +AE + +M D + PDE TY ++ + R + A F++
Sbjct: 308 VTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKE 367
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGK 278
M GL P++ +N L+ L + EA F I K K D SY ++ + G+
Sbjct: 368 MTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGR 427
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAE 338
++ + + D+G + S + + +E ++ E + + + A
Sbjct: 428 FVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYAT 487
Query: 339 AAEAAKRSARAA 350
A R R A
Sbjct: 488 VIAALCRMGRLA 499
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 9/240 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D ++ L+ G+ G D F + + + G D V Y +L+ GYF G ++ +
Sbjct: 587 DIFTFNSLIDGYCLVGKMDKAFGVLDAMVS--AGTEPDVVTYSTLINGYFKSGRIDDGLI 644
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ E + + VK + V + VLD L G+ A K+F M A+++ ++
Sbjct: 645 LFREMLCKR--VKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGT-----AMSISTYT 697
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
++ G C +AI +F K+G + N +I L K EA +L+ +S
Sbjct: 698 IILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSAS 757
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ P+ TYG+++ + V++ F M +G P+ + N ++ L+Q G + +A
Sbjct: 758 GLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
+TYG+LMD C R D G +F +++ +GLR + V N + L DEA S
Sbjct: 166 HTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLH 225
Query: 255 MVKKLKM--DDASYKFMMKALSDGGK----LDEILEIVGGILDDGG----IEFSEELQ-E 303
+ +L D SY ++K+L G + LD +L + G DG + ++ +
Sbjct: 226 RMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKG---DGCSPDVVSYTMVIHGL 282
Query: 304 FVKGELSK------EGREEEVVK-LMEKKEREKAEAKAREAEAAEAAKR 345
F++GE+SK E ++ VV ++ A KAR + AE R
Sbjct: 283 FMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLR 331
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 136/271 (50%), Gaps = 10/271 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF D V Y L+ G + G++ V RL +L+ V D V+Y +++
Sbjct: 192 QGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGH--SVKPDVVMYTTIIHCLCKNKRV 249
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A + Y+E + + + + N+++ C G EA L + MK ++ P +
Sbjct: 250 GDACDLYSEMIVK--GISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINP-----D 302
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN++ D +G+ +AI +F +M P+ +++ +LID LCKN L A L
Sbjct: 303 VYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCK 362
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M ++G+ PD Y+Y +L+DA + R+++ +F+ ++ G N+ YN ++ L + G
Sbjct: 363 KMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAG 422
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKAL 273
+ + M K M DA ++K ++ AL
Sbjct: 423 LFGDVMDLKSKMEGKGCMPDAITFKTIICAL 453
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 9/225 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG + Y+ L+ GF G+ F L E+ KL + D + L+ +
Sbjct: 259 MIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEM--KLKNINPDVYTFNILIDALGKE 316
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ + E +N + V S++D LC N + A+ L +MK + P
Sbjct: 317 GKIDEAISLFEEMKHKNMFPNI--VTYTSLIDGLCKNHHLERAIALCKKMKEQGIQP--- 371
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+ ++ D C GR ++A + F+ + + ++N +I+ LCK G+ + +
Sbjct: 372 --DVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMD 429
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
L +M KG PD T+ ++ A FE + D + R+M+ GL
Sbjct: 430 LKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKRLAVNLGSFNVMADGY 134
+++ V + N +++ C+ A +F + +K ++P A+ L N + G
Sbjct: 120 QSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPD---AITL---NTLIKGL 173
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G K A+ K+ D +S+ LI+ LCK G L ++ V PD
Sbjct: 174 CFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDV 233
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
Y ++ + RV D + +M+ G+ PN+ YN L+ +G L EA S +
Sbjct: 234 VMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNE 293
Query: 255 M-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
M +K + D ++ ++ AL GK+DE + +
Sbjct: 294 MKLKNINPDVYTFNILIDALGKEGKIDEAISL 325
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ F +M R P T F+N++ L KN L+ + GV P+ T +L++
Sbjct: 77 AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKM 261
+ + + F ++ G P+ N L+ L G + A F D ++ + ++
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL 196
Query: 262 DDASYKFMMKALSDGG 277
D SY ++ L G
Sbjct: 197 DQVSYGTLINGLCKAG 212
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 11/320 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ + ++ LM GF + G +F+E+ ++ G+ V + +L+ G G E
Sbjct: 137 GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKR--GLRPTVVSFNTLISGCCKAGAVE 194
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E + V E+ V +++++ LC G+ DE LFD M K L N
Sbjct: 195 EGFRL--KGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCG-----KGLVPNG 247
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F V+ DG C G+ A++ F+ M PD +++N LI+ LCK G L EA L E
Sbjct: 248 VTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNE 307
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS G+ PD T+ L+D C + ++ R+MV+ G+ + + L+ L + G
Sbjct: 308 MSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGR 367
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+ +A+ D++ K DD +Y ++ G + +++ + DG +
Sbjct: 368 VHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNA 427
Query: 304 FVKGELSKEGREEEVVKLME 323
+ G L K+G+ + L++
Sbjct: 428 LMNG-LCKQGQVKNAKMLLD 446
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 10/271 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D +S L+ G ++G D LF+E+ K G+V +GV + L+ G G + A+
Sbjct: 210 PDVFTFSALINGLCKEGRLDEGSLLFDEMCGK--GLVPNGVTFTVLIDGQCKGGKVDLAL 267
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + + + V+ V N++++ LC G EA +L + M P R+ +F
Sbjct: 268 KNFQMMLAQ--GVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRI-----TF 320
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ DG C G + A+E+ R+M E D ++F LI LC++G + +AE + +M
Sbjct: 321 TTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLS 380
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G PD+ TY +++D + V G ++M G P + YN L+ L + G +
Sbjct: 381 AGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKN 440
Query: 248 AKSFFDIMVK-KLKMDDASYKFMMKALSDGG 277
AK D M+ + +D +Y +++ S G
Sbjct: 441 AKMLLDAMLNVGVAPNDITYNILLEGHSKHG 471
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 37/232 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ G + GD RL E+ G+ D + + +L+ G
Sbjct: 273 MLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSA--SGLRPDRITFTTLIDGCCKY 330
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
G E A+E V E +++ VA ++ LC +G+ +A ++ M + P
Sbjct: 331 GDMESALEIKRRMVEE--GIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDP 388
Query: 118 ----------KRLAVNLG-----------------SFNVMADGYCGQGRFKDAIEVFRKM 150
K+ V +G ++N + +G C QG+ K+A + M
Sbjct: 389 TYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAM 448
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
+P+ +++N L++ K+G + + S+KG+ D +Y L++
Sbjct: 449 LNVGVAPNDITYNILLEGHSKHGSSVDVDIFN---SEKGLVKDYASYTALVN 497
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 5/138 (3%)
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
L + Y E+ D G P+ + + +LM +V V F ++ GLRP + +N
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182
Query: 235 LVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE--IL--EIVGGI 289
L+ + G ++E +M +++ D ++ ++ L G+LDE +L E+ G
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242
Query: 290 LDDGGIEFSEELQEFVKG 307
L G+ F+ + KG
Sbjct: 243 LVPNGVTFTVLIDGQCKG 260
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 157/318 (49%), Gaps = 13/318 (4%)
Query: 10 PVVYSY-LMLGFV-RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V++Y +M+G V ++GD LFE++K+ G+ D V Y +L+ GY G+ +E++
Sbjct: 130 PTVFTYNIMIGHVCKEGDMLTARSLFEQMKKM--GLTPDIVTYNTLIDGYGKIGLLDESV 187
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E + + + N+++++ C A + F MK+ K L N+ S+
Sbjct: 188 CLFEEM--KFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKD-----KDLKPNVISY 240
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ + D C +G + AI+ F M P+ ++++LID CK G L EA L EM
Sbjct: 241 STLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQ 300
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+ V+ + TY L+D E +++ FR M +G+ PNL Y L+ ++V +D+
Sbjct: 301 EHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDK 360
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A F+ M +K +K D + ++ L KL+E +I+ + + GI + + +
Sbjct: 361 AMELFNEMREKDIKPDILLWGTIVWGLCSESKLEEC-KIIMTEMKESGIGANPVIYTTLM 419
Query: 307 GELSKEGREEEVVKLMEK 324
K G E + L+E+
Sbjct: 420 DAYFKAGNRTEAINLLEE 437
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 141/293 (48%), Gaps = 10/293 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + Y+ L+ G ++ D LF E++EK + D +++G+++ G + E
Sbjct: 337 GVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREK--DIKPDILLWGTIVWGLCSESKLE 394
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E E + S + + V +++DA G EA+ L + M++ V +
Sbjct: 395 ECKIIMTEM--KESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGT-----EVTV 447
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG C +G ++AI F +M ++ P+ + LID LCKN + +A++L+ E
Sbjct: 448 VTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDE 507
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M DK + PD+ Y ++D + + KM++ G+ +L Y LV L Q G
Sbjct: 508 MQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQ 567
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+ +A+ F M+ K + D+ +++ + G +DE +E+ +++ G I
Sbjct: 568 VQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLIH 620
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 117/246 (47%), Gaps = 11/246 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF-MKGME 63
G D V Y+ L+ G+ + G D LFEE+ K G D + Y +L+ + KGM
Sbjct: 162 GLTPDIVTYNTLIDGYGKIGLLDESVCLFEEM--KFMGCEPDVITYNALINSFCKFKGM- 218
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A E + E ++ +K + ++ ++++DALC G A+K F M P
Sbjct: 219 LRAFEFFREM--KDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEF--- 273
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++ + D C G +A + +M + + +++ L+D LC+ GM+ EAEEL+
Sbjct: 274 --TYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFR 331
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M GV P+ Y L+ +V +D F +M + ++P++ ++ +V L
Sbjct: 332 AMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSES 391
Query: 244 MLDEAK 249
L+E K
Sbjct: 392 KLEECK 397
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 142/348 (40%), Gaps = 46/348 (13%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ YS L+ ++G + F ++ G++ + Y SL+ G EA
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFFVDMTRV--GLLPNEFTYSSLIDANCKAGNLGEAFMLA 295
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+E + E+ V ++ V ++LD LC G +EA +LF M P NL ++ +
Sbjct: 296 DEMLQEH--VDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTP-----NLQAYTAL 348
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G+ A+E+F +M E PD L + ++ LC L E + + EM + G+
Sbjct: 349 IHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGI 408
Query: 191 NPDEYTYGLLMDACFEV-NR----------------------------------VDDGAT 215
+ Y LMDA F+ NR V +
Sbjct: 409 GANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIY 468
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALS 274
YF +M D L+PN+AVY L+ L + + +AK FD M K + D +Y M+
Sbjct: 469 YFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNL 528
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
G E L + ++ + GIE + LS+ G+ ++ K +
Sbjct: 529 KHGNFQEALNMRNKMM-EMGIELDLYAYTSLVWGLSQCGQVQQARKFL 575
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 8/251 (3%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
+FE L V V+ +L GM E A +C+ V A + N+ L
Sbjct: 47 VFEILWTTRNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMT--KFRVLPKARSCNAFL 104
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
L G+ D + F M P + ++N+M C +G A +F +M
Sbjct: 105 HRLSKAGEGDLSRDFFRDMVGAGIAP-----TVFTYNIMIGHVCKEGDMLTARSLFEQMK 159
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ +PD +++N LID K G+L E+ L+ EM G PD TY L+++ + +
Sbjct: 160 KMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGML 219
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMM 270
+FR+M D L+PN+ Y+ L+ L + GM+ A FF D+ L ++ +Y ++
Sbjct: 220 RAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLI 279
Query: 271 KALSDGGKLDE 281
A G L E
Sbjct: 280 DANCKAGNLGE 290
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 165/354 (46%), Gaps = 42/354 (11%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRL-------------------FEELKEK------ 39
G AD V Y L+ GF R + + R+ +EL++K
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322
Query: 40 ------LG--GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
LG G+V + Y +L+ ++A + E G ++ + V ++
Sbjct: 323 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGR--GLEPNEVTYAILI 380
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
ALC G ++AL LFD+M++ K + V + +N + +GYC QG A + M
Sbjct: 381 HALCKRGMIEDALCLFDKMRD-----KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV 435
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ +P S++ LI LC+NG L+ A EL+ EM+++G+ + YT+ L++ + ++D
Sbjct: 436 KEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMD 495
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ A F KM+DS + PN +N ++ VG + +A +D MV+ LK D+ +Y+ ++
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 555
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
L + + E V + + + + L + G L +EGR E L ++
Sbjct: 556 SGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYG-LFREGRFTETYHLWDE 608
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 33/265 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G D V ++ ++ ++ D + LF E+KE+ GV D + Y ++ +
Sbjct: 609 MAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ--GVKPDDIFYTCMIDALSKE 666
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A+ C+++ V + S + V + +++ LC +G A L M + P +
Sbjct: 667 ENMIQALNCWDQMVIDGYSP--NTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 724
Query: 121 AVN-----------------------------LGSFNVMADGYCGQGRFKDAIEVFRKMG 151
N + SFN++ G C G+ ++AI++ RK+
Sbjct: 725 TYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKIT 784
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
E SPD +S++ +I +LCK G + +A EL+ EM KG+ PD Y + + C D
Sbjct: 785 ESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESD 844
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLV 236
+ M+ SG++PN Y L+
Sbjct: 845 KALGIYTNMIRSGVQPNWDTYRALL 869
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 54/291 (18%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG------SFNV 129
E+ VK SAV N ++ LC N + EA+++ K + VN+G ++
Sbjct: 225 ESEGVKASAVPYNVLMYGLCKNMRVQEAVEV-----------KNVMVNIGVTADEVTYRT 273
Query: 130 MADGYCGQGRFKDAIEVFRKM-------GEYRCS-------------------------- 156
+ G+C + A+ + M E CS
Sbjct: 274 LVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLG 333
Query: 157 --PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
P+ ++N LID+LCKN +A+ L+ EM+ +G+ P+E TY +L+ A + ++D
Sbjct: 334 MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDAL 393
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
F KM D G++ + YN L+ + G LD A+ MVK+ L ASY ++ L
Sbjct: 394 CLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGL 453
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
G L +E+ + + G + + G K+ + +E +L +K
Sbjct: 454 CRNGDLSSAMELHREMAERGIAWNNYTFTALING-FCKDKKMDEAARLFDK 503
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 125/270 (46%), Gaps = 10/270 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y+ L+ + G + LF+++++K G+ Y SL+ GY +G
Sbjct: 367 RGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK--GIKVTVYPYNSLINGYCKQGSL 424
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A + V E + +A + + ++ LC NG A++L M + +A N
Sbjct: 425 DRARGLLSGMVKE--GLTPTAASYSPLIAGLCRNGDLSSAMELHREMAE-----RGIAWN 477
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+F + +G+C + +A +F KM + P+ ++FN +I+ C G + +A +LY
Sbjct: 478 NYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYD 537
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M + G+ PD YTY L+ + V + + +S N L+ L + G
Sbjct: 538 QMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREG 597
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKA 272
E +D M V+ +K+D S+ ++ A
Sbjct: 598 RFTETYHLWDEMAVRGVKLDLVSFTIIVYA 627
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 143/312 (45%), Gaps = 18/312 (5%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+ + V ++ ++ G+ G+ F+L++++ E G+ D Y SL+ G + +A
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM--GLKPDNYTYRSLISGLCLTSGVSKA 567
Query: 67 MECYNEAVG--ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
NE V ENS ++ + ++L L G+F E L+D M + + ++L
Sbjct: 568 ----NEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMA-----VRGVKLDL 618
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
SF ++ Q + + +FR+M E PD + + +ID L K + +A + +
Sbjct: 619 VSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ 678
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G +P+ T+ +L++ + + ++M+ + PN YN + G
Sbjct: 679 MVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGD 738
Query: 245 LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEE 300
+++AK M++ S+ ++K L GK+ E ++++ I + G I +S
Sbjct: 739 MEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTI 798
Query: 301 LQEFVK-GELSK 311
+ E K G+++K
Sbjct: 799 IHELCKMGDINK 810
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 6/218 (2%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
S V + + + A C + D A L RM++E K AV +NV+ G C
Sbjct: 191 QSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE--GVKASAV---PYNVLMYGLCK 245
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
R ++A+EV M + D +++ L+ C+ L A + +M G P E
Sbjct: 246 NMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEAN 305
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
++D + V++ + K+ D G+ PN+ YN L+ KL + D+A F M
Sbjct: 306 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 365
Query: 257 -KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ L+ ++ +Y ++ AL G +++ L + + D G
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
+ ++ L K A A +L+ +M GV+ DEY Y + A E +D +M
Sbjct: 167 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 226
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
G++ + YN L+ L + + EA ++MV + D+ +Y+ ++ +L+
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
L I ++ G + SE F+ EL K+ EE L
Sbjct: 287 ALRITHDMIRLGFVP-SEANCSFMIDELRKKELVEEAFSL 325
>gi|356506793|ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Glycine max]
Length = 461
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 147/312 (47%), Gaps = 16/312 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D V Y+ L+ + R D + + + + G+ D V + +L+ G K +
Sbjct: 43 GVLPDVVTYNTLIDAYCRFATLDVAYSVLARMHD--AGIPPDVVSFNTLISGAVRKSLFS 100
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR--MKNEHNPPKRLAV 122
++++ ++E + + A ++N +++ L GK DEA ++F +++E +P
Sbjct: 101 KSLDLFDEML--KRGINPDAWSHNILMNCLFQLGKPDEANRVFKEIVLRDEVHP------ 152
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++N+M +G C G +A+ +FR + + P L++N LI+ LCK L +A +
Sbjct: 153 --ATYNIMINGLCKNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRVL 210
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
E + G P+ TY +M CF ++G +M G + Y ++ +++
Sbjct: 211 KEFGETGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEMRSLGFTFDGFAYCTVIAAMIKT 270
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G + EA+ ++MV ++ D SY ++ G+LD+ L ++ I + G+E +
Sbjct: 271 GRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALRLLDEI-EGEGLECDQYT 329
Query: 302 QEFVKGELSKEG 313
+ L K G
Sbjct: 330 HTIIVDGLCKAG 341
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 114/274 (41%), Gaps = 26/274 (9%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P Y+ ++ G ++G LF L+ G V + Y +L+ G ++A
Sbjct: 150 VHPATYNIMINGLCKNGYVGNALSLFRNLQRH--GFVPQVLTYNALINGLCKARRLKDAR 207
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E GE + + +AV +V+ F+E L++ M++ LG F
Sbjct: 208 RVLKE-FGETGN-EPNAVTYTTVMTCCFRCRLFEEGLEILSEMRS-----------LG-F 253
Query: 128 NVMADGYCG-------QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
YC GR ++A E+ M PD +S+N LI+ C+ G L +A
Sbjct: 254 TFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALR 313
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L E+ +G+ D+YT+ +++D + D + M G NL +N + L
Sbjct: 314 LLDEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLVAFNCFLDGLG 373
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALS 274
+ G +D A F++M K D +Y ++ L
Sbjct: 374 KAGHIDHALRLFEVMEVK---DSFTYTIVVHNLC 404
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 115/288 (39%), Gaps = 49/288 (17%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V N+++DA C D A + RM + PP ++ SFN + G + F +
Sbjct: 48 VVTYNTLIDAYCRFATLDVAYSVLARMHDAGIPP-----DVVSFNTLISGAVRKSLFSKS 102
Query: 144 IEVFRKMGEYRCSPDTLS----------------------------------FNNLIDQL 169
+++F +M + +PD S +N +I+ L
Sbjct: 103 LDLFDEMLKRGINPDAWSHNILMNCLFQLGKPDEANRVFKEIVLRDEVHPATYNIMINGL 162
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
CKNG + A L+ + G P TY L++ + R+ D ++ ++G PN
Sbjct: 163 CKNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRVLKEFGETGNEPNA 222
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGG 288
Y ++ + + +E M D +Y ++ A+ G++ E EIV
Sbjct: 223 VTYTTVMTCCFRCRLFEEGLEILSEMRSLGFTFDGFAYCTVIAAMIKTGRMQEAEEIVEM 282
Query: 289 ILDDGG----IEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
++ G + ++ + + ++GR ++ ++L+++ E E E
Sbjct: 283 MVSSGVRPDLVSYNTLINLY-----CRQGRLDDALRLLDEIEGEGLEC 325
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
S T N + LCK + AE + GV PD TY L+DA +D +
Sbjct: 10 SLSTKLLNITVSSLCKAKQIPNAETAIVDGIRLGVLPDVVTYNTLIDAYCRFATLDVAYS 69
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS 274
+M D+G+ P++ +N L+ V+ + ++ FD M+K+ + D S+ +M L
Sbjct: 70 VLARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFDEMLKRGINPDAWSHNILMNCLF 129
Query: 275 DGGKLDE 281
GK DE
Sbjct: 130 QLGKPDE 136
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 159/362 (43%), Gaps = 44/362 (12%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D + Y+ ++ GF R D +++ + +K K G D V Y L+ +GM + A+
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNK--GFSPDIVTYNILIGSLCSRGMLDSAL 181
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP---------- 117
E N+ + EN K + V +++A G DEA+KL D M + P
Sbjct: 182 EFKNQLLKENC--KPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIR 239
Query: 118 --------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
K A ++ ++N++ G QG+++ E+ M C
Sbjct: 240 GMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEA 299
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
+ ++++ LI +C++G + E L +M KG+ PD Y Y L+ A + RVD
Sbjct: 300 NVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVL 359
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDG 276
M+ G P++ YN ++ L + DEA S F+ + + + +SY M AL
Sbjct: 360 DVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWST 419
Query: 277 GK----LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
G L ILE++ +D GI ++ + L ++G +E ++L+ E E +E
Sbjct: 420 GHKVRALGMILEMLDKGVDPDGITYNSLIS-----CLCRDGMVDEAIELLVDMEMESSEC 474
Query: 333 KA 334
K
Sbjct: 475 KP 476
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 14/282 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G A+ V YS L+ RDG + L +++K+K G+ DG Y L+ +
Sbjct: 292 MVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKK--GLKPDGYCYDPLIAALCKE 349
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+E + + + + V N++L LC + DEAL +F+++ P
Sbjct: 350 GRVDLAIEVLDVMISDGCVPDI--VNYNTILACLCKQKRADEALSIFEKLGEVGCSP--- 404
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N S+N M G A+ + +M + PD +++N+LI LC++GM+ EA E
Sbjct: 405 --NASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIE 462
Query: 181 LY--GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
L EM P +Y +++ +V+RV D MVD G RPN Y L+
Sbjct: 463 LLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEG 522
Query: 239 LVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLD 280
+ G L++A+ +V + + S++ + K KLD
Sbjct: 523 IGFGGCLNDARDLATTLVNMDAISEHSFERLYKTFC---KLD 561
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 10/271 (3%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
N K V ++ L + D+A+++ ++N +P +L ++N + G+C
Sbjct: 85 NKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHP------DLIAYNAIITGFCR 138
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
R A +V +M SPD +++N LI LC GML A E ++ + P T
Sbjct: 139 ANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVT 198
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIM 255
Y +L++A +D+ +M++ L+P++ YN ++ + + G +D A I
Sbjct: 199 YTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSIS 258
Query: 256 VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
K D +Y +++ L + GK + E++ ++ G E + + + ++G+
Sbjct: 259 SKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVAR-GCEANVVTYSVLISSVCRDGKV 317
Query: 316 EEVVKLME--KKEREKAEAKAREAEAAEAAK 344
EE V L++ KK+ K + + A K
Sbjct: 318 EEGVGLLKDMKKKGLKPDGYCYDPLIAALCK 348
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 144/302 (47%), Gaps = 23/302 (7%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
+ V+YS ++ ++ + L+ ++ K V D V + +L+ G+ M G +EA
Sbjct: 186 TNVVMYSTIIDSLCKEKLVTEAYELYSQMIVK--KVSPDVVTFSALIYGFCMVGQFKEAF 243
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP----------- 116
++E V N + N ++DALC G E + M E N
Sbjct: 244 GLFHEMVLTN--INPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNII 301
Query: 117 -PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC---SPDTLSFNNLIDQLCKN 172
+R+ ++ S+ ++ C +A+ +F +M RC +PD +++++LID LCK+
Sbjct: 302 GKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEM---RCKGITPDKVTYSSLIDGLCKS 358
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
++ A EL +M +G D TY + A + ++VD +K+ D G++PN+ Y
Sbjct: 359 ERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTY 418
Query: 233 NRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
N L+ L + G + A+ F D+++K K+ +Y M+ L G DE + ++ + D
Sbjct: 419 NILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMED 478
Query: 292 DG 293
+G
Sbjct: 479 NG 480
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 150/330 (45%), Gaps = 28/330 (8%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D + + L+ G +G + + + G + V YG L+ G G
Sbjct: 113 GYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIAR--GFRLNEVSYGILINGLCKMGETR 170
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ + G+ V + V ++++D+LC EA +L+ +M K+++ ++
Sbjct: 171 AALQVLRKIDGK--LVNTNVVMYSTIIDSLCKEKLVTEAYELYSQM-----IVKKVSPDV 223
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG----------- 173
+F+ + G+C G+FK+A +F +M +PD +FN L+D LCK G
Sbjct: 224 VTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAV 283
Query: 174 MLAE------AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
M+ E A+ ++ + + V PD ++Y +++ ++ VD+ + F +M G+ P
Sbjct: 284 MMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITP 343
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+ Y+ L+ L + + A D M + D +Y + AL ++D+ + +V
Sbjct: 344 DKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALV 403
Query: 287 GGILDDGGIEFSEELQEFVKGELSKEGREE 316
I D GI+ + + L KEGR E
Sbjct: 404 KKI-KDQGIQPNINTYNILIDGLCKEGRFE 432
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 15/222 (6%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
P V+SY ++ + D LF E++ K G+ D V Y SL+ G
Sbjct: 306 VTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCK--GITPDKVTYSSLIDGLCKSERISH 363
Query: 66 AMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A E ++ A G+ + V + S L ALC N + D+A+ L ++K++ P N
Sbjct: 364 AWELLDQMHARGQPADV----ITYTSFLHALCKNHQVDKAVALVKKIKDQGIQP-----N 414
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N++ DG C +GRF++A +F+ + ++N +I+ LC G+ EA L
Sbjct: 415 INTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLE 474
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+M D G PD TY ++ A F+ + R+M+ GL
Sbjct: 475 KMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 83 SAVANNSVLDALC--NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRF 140
S + N +L +L NN + A+ L+ R++ P ++ +FN + + YC G
Sbjct: 45 SIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITP-----SIVTFNTVINCYCHLGEM 99
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
A V K+ + PDT++ LI LC NG + EA + + +G +E +YG+L
Sbjct: 100 DFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGIL 159
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKL 259
++ ++ RK+ + N+ +Y+ ++ L + ++ EA + ++VKK+
Sbjct: 160 INGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKV 219
Query: 260 KMDDASYKFMMKALSDGGKLDE 281
D ++ ++ G+ E
Sbjct: 220 SPDVVTFSALIYGFCMVGQFKE 241
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 43 VVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE 102
V D Y ++K M +EA+ +NE + V +S++D LC + +
Sbjct: 306 VTPDVHSYTIIIKRLCKIKMVDEALSLFNEM--RCKGITPDKVTYSSLIDGLCKSERISH 363
Query: 103 ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
A +L D+M P ++ ++ C + A+ + +K+ + P+ ++
Sbjct: 364 AWELLDQMHARGQPA-----DVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTY 418
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMV 221
N LID LCK G A+ ++ ++ KG +TY ++++ C E D+ T KM
Sbjct: 419 NILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLE-GLFDEAMTLLEKME 477
Query: 222 DSGLRPNLAVYNRLVGKL 239
D+G P++ Y ++ L
Sbjct: 478 DNGCTPDVVTYETIIRAL 495
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 9/190 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V YS L+ G + + L +++ + G +D + Y S +
Sbjct: 336 MRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHAR--GQPADVITYTSFLHALCKN 393
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A+ + ++ ++ + N ++D LC G+F+ A +F + K
Sbjct: 394 HQVDKAVALVKKI--KDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLL-----IKGY 446
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
V + ++N+M +G C +G F +A+ + KM + C+PD +++ +I L KN +AE+
Sbjct: 447 KVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEK 506
Query: 181 LYGEMSDKGV 190
L EM +G+
Sbjct: 507 LLREMIARGL 516
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 7/182 (3%)
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCK--NGMLAEAEELYGEMSDKGVNPDEYTYG 198
DAI F +M SP + FN ++ L K N A LY + + P T+
Sbjct: 28 HDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFN 87
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVK 257
+++ + +D + K++ G P+ L+ L G + EA F D ++ +
Sbjct: 88 TVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIAR 147
Query: 258 KLKMDDASYKFMMKALSDGGKLDEILEIV----GGILDDGGIEFSEELQEFVKGELSKEG 313
++++ SY ++ L G+ L+++ G +++ + +S + K +L E
Sbjct: 148 GFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEA 207
Query: 314 RE 315
E
Sbjct: 208 YE 209
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 143/317 (45%), Gaps = 10/317 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + D VVY+ L+ GF + G + F+E+ K + D + Y +L++G+
Sbjct: 354 MMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSK--KISPDYITYTTLIQGFGQG 411
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E ++E + +K V +++D C G+ A L + M P
Sbjct: 412 GKVIEPQNLFHEMISR--GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP--- 466
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + DG C G A E+ +M + + +N++++ +CK G + +A +
Sbjct: 467 --NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM G++PD TY ++DA + +D ++M+D GL+P + +N L+
Sbjct: 525 LMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC 584
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+GML++ M++K + DA +Y +MK ++ +I + + G S
Sbjct: 585 MLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSN 644
Query: 300 ELQEFVKGELSKEGREE 316
+KG +E
Sbjct: 645 TYNILIKGHCKARNLKE 661
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 9/251 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y L+ G + G+ D L +E+++K G+ + +Y S++ G G E
Sbjct: 463 GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK--GLQLNVCIYNSMVNGICKAGNIE 520
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A++ E E + + A+ +V+DA C G D+A KL M + P +
Sbjct: 521 QAIKLMKEM--EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP-----TV 573
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FNV+ +G+C G +D + M E PD +++N L+ Q C + ++Y
Sbjct: 574 VTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKR 633
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++GV PD TY +L+ + + + +++M++ G P + YN L+ + +
Sbjct: 634 MRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRK 693
Query: 245 LDEAKSFFDIM 255
EA+ F+ M
Sbjct: 694 FXEARELFEEM 704
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ + + N ++ +LC GK EA +L +M + P ++ S++ + DGYC G
Sbjct: 254 ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTP-----DVVSYSTVIDGYCHLGE 308
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
K A+++ M P+ ++N++I LCK G EAE++ EM + + PD Y
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTT 368
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
L+ F++ V +F +M+ + P+ Y L+ Q G + E ++ F M+ +
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428
Query: 259 LKMDDASYKFMMKALSDGGKL 279
LK D+ +Y ++ G++
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEM 449
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ N S+N++ C G+ K+A + +M +PD +S++ +ID C G L +A
Sbjct: 254 ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKAL 313
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L +M KG+ P+ YTY ++ ++ + + R+M+ + P+ VY L+
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373
Query: 240 VQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDE 281
++G + A +FD M+ KK+ D +Y +++ GGK+ E
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIE 416
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 45/282 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D + Y+ L+LGF +G +G FRL EE+ ++ G+ D Y L++G
Sbjct: 514 MLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR--GIQPDIYTYNFLLRG---- 567
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
LCN GK D+A+KL+D K L
Sbjct: 568 ---------------------------------LCNVGKLDDAIKLWDEFK-----ASGL 589
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ +M +GYC R +D +F ++ + +++ +N +I C+NG +A A +
Sbjct: 590 ISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQ 649
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M KG+ P+ TY L+ + V+D +M G PN+ Y L+G
Sbjct: 650 LLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYC 709
Query: 241 QVGMLDEAKS-FFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
++G +D A+S + +++ + + +Y M+ G +++
Sbjct: 710 KLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEK 751
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 132/269 (49%), Gaps = 10/269 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D Y++L+ G G D +L++E K G++S+ YG +M+GY
Sbjct: 552 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKA--SGLISNIHTYGIMMEGYCKANRI 609
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+ +NE + + ++++++ N ++ A C NG AL+L + MK+ K + N
Sbjct: 610 EDVENLFNELLSK--KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS-----KGILPN 662
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++ + G C G +DA + +M + P+ + + LI CK G + AE +
Sbjct: 663 CATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWL 722
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM ++P+++TY +++D ++ ++ KM +SG+ P++ YN L +
Sbjct: 723 EMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAN 782
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
+D A D M + L +D+ +Y ++
Sbjct: 783 DMDNAFKVCDQMATEGLPVDEITYTTLVH 811
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 134/292 (45%), Gaps = 31/292 (10%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +L +L +F++ ++F M P ++ SF + + C G+ ++AIE+F
Sbjct: 213 NFLLSSLVKANEFEKCCEVFRVMSEGACP------DVFSFTNVINALCKGGKMENAIELF 266
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
KM + SP+ +++N +I+ LC+NG L A EL +M+ KGV P+ TYG L++ ++
Sbjct: 267 MKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKL 326
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
N D +M+ SG PN+ V+N L+ ++G ++ A D+M+ K + +
Sbjct: 327 NFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTL 386
Query: 267 KFMMKALSDGGK-------LDEILEIVGGILDDGGIEFSEELQE---------FVKGELS 310
+M+ + L+EIL I D L + F K LS
Sbjct: 387 YSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLS 446
Query: 311 KEGREEEVVKLM-------EKKEREKAEAKAREAE-AAEAAKRSARAAIASL 354
+ R +++ M + K E E R E + A+K ++ A I L
Sbjct: 447 RNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGL 498
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 133/286 (46%), Gaps = 16/286 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GF + VV++ L+ G+ + G+ +G ++ + + K + V SLM+G+
Sbjct: 339 MIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISK--NITPTSVTLYSLMQGF--- 393
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANN--SVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ + +E A+ E S +S +N SV+ LC ++ A + M + + P
Sbjct: 394 -CKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPS 452
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L + + + G C G+ +A E++ ++ E ++ N LI LC G L EA
Sbjct: 453 DLLLTM-----LVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEA 507
Query: 179 EELYGEMSDKGVNPDEYTY-GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
+ EM ++G+ D TY L++ C E +V+ +M G++P++ YN L+
Sbjct: 508 SRIVKEMLERGLPMDRITYNALILGFCNE-GKVEGCFRLREEMTKRGIQPDIYTYNFLLR 566
Query: 238 KLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEI 282
L VG LD+A +D L + +Y MM+ +++++
Sbjct: 567 GLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 612
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 111/266 (41%), Gaps = 14/266 (5%)
Query: 29 VFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANN 88
VFR+ E G D + +++ G E A+E + + E + + V N
Sbjct: 231 VFRVMSE------GACPDVFSFTNVINALCKGGKMENAIELFMKM--EKLGISPNVVTYN 282
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
+++ LC NG+ D A +L ++M + P NL ++ + +G F V
Sbjct: 283 CIINGLCQNGRLDNAFELKEKMTVKGVQP-----NLKTYGALINGLIKLNFFDKVNHVLD 337
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+M +P+ + FNNLID CK G + A ++ M K + P T LM + +
Sbjct: 338 EMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSD 397
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
+++ +++ SGL + +V L + A F +M+ + + D
Sbjct: 398 QIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLT 457
Query: 268 FMMKALSDGGKLDEILEIVGGILDDG 293
++ L GK E E+ +L+ G
Sbjct: 458 MLVCGLCKDGKHLEATELWFRLLEKG 483
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 146/321 (45%), Gaps = 13/321 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ +LG+ R G R+F + L G + Y +L+ G GM
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP--LRGCLRTAFTYTALLHGLLGAGMVR 159
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK-FDEALKLFDRMKNEHNPPKRLAVN 123
EAM + ++ + A +++ LC G+ + + L + M N P N
Sbjct: 160 EAMAVFVGMRADSCAPDTHVYA--TMVHGLCEAGRTEEAEVLLEEAMSNGFEP------N 211
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +N + DGYC G + A++VF M RCSP+ ++ LI LCK+G + A L+
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + G+ P+ TY L+ + M +GL PN ++ L+ L +
Sbjct: 272 RMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKRE 331
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++EA+ F +VKK +K+++ Y ++ L GK+D E++ ++ +G + +
Sbjct: 332 KVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYS 391
Query: 303 EFVKGELSKEGREEEVVKLME 323
+ G L ++ + + ++E
Sbjct: 392 SLIDG-LCRQKKLSQATLMLE 411
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 134/282 (47%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ L+ G +G FRL ++ G+V + + L+ + E
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETN--GLVPNDWTFSVLIDALCKREKVE 334
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA V + VK++ V S++D LC GK D A +L +M +E P +
Sbjct: 335 EAQLFLGSLVKKG--VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP-----DA 387
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S++ + DG C Q + A + M E +++ +ID+L + ++++ +
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK 447
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G+NPD TY + + + E R++D + +MVD G+ PNL YN L+ +G+
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ +A S F++MV K K ++ SY +++ + D ++I
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 141/329 (42%), Gaps = 15/329 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG A PV Y+ ++ VR+ S+G ++F+++ G+ D V Y ++ Y +
Sbjct: 413 MMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIAT--GINPDIVTYTVFVRSYCEE 470
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-- 118
G E+A + V + V + V N+++ N G +A F+ M + P
Sbjct: 471 GRMEDAESMIVQMV--DRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNED 528
Query: 119 ------RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
RL V S + D + KD + + E + ++ I LC+
Sbjct: 529 SYTVLLRLVVKKSSSDNSVDIW-KIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRV 587
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
L EA+ + M + + P E Y ++D C + + D T M SG P+L Y
Sbjct: 588 DRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESY 647
Query: 233 NRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
++ L + G AK F D+++K+ D+ +K ++ L G + E ++ ++
Sbjct: 648 RIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLL-SVMK 706
Query: 292 DGGIEFSEELQEFVKGELSKEGREEEVVK 320
+ G + S + + GE++ +E+ +
Sbjct: 707 EHGYQPSNTINAMITGEITVTNEVQEIAR 735
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 93/238 (39%), Gaps = 11/238 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N++L AL + F + L RM P R NL ++ + + YC G A +
Sbjct: 45 NTLLMALARHRMFPDMESLASRM------PAR---NLRTYTTLINAYCLAGDIPAAKQHL 95
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ +PD+ ++ + + C+ GML A ++ M +G +TY L+
Sbjct: 96 TSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGA 155
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG-MLDEAKSFFDIMVKKLKMDDASY 266
V + F M P+ VY +V L + G + + M + + Y
Sbjct: 156 GMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVY 215
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ + G+++ L++ G+ + E + G L K G+ E + L +
Sbjct: 216 NALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHG-LCKSGKVERAMVLFSR 272
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 145/321 (45%), Gaps = 11/321 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGFV + V + L+ G + G+ +L ++ E+ G+V D + Y +L+ G +G
Sbjct: 495 KGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLER--GLVFDRITYNTLISGCCKEGKV 552
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+E E E V + ++ N +L LCN K DEA +L+ K P N
Sbjct: 553 KEGFELKEEMVKK--GIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVP-----N 605
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ VM DGYC + ++ + ++ + +++ +N+LI C NG + A L
Sbjct: 606 VYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRD 665
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M +GV TY LM + VDD +M GL PN+ Y ++G ++G
Sbjct: 666 DMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLG 725
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+++ M + + +Y M+ GK E +++ + + G + +
Sbjct: 726 QMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYN 785
Query: 303 EFVKGELSKEGREEEVVKLME 323
F G L KEG+ EE K+ +
Sbjct: 786 AFTNG-LCKEGKVEEAFKVCD 805
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 139/310 (44%), Gaps = 41/310 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV + VVY+ L+ G+ + G+ ++ +++ K G+ + V SL++G+
Sbjct: 356 GFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSK--GISPNSVTLNSLIQGFCKSDQIG 413
Query: 65 EAMECYNEAVGENSSV---KMSAVAN------------------------------NSVL 91
+A E +G + S V N +++
Sbjct: 414 QAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLV 473
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
LC GK EA++L+ R+ + P N+ + N + G C G ++ +++ R M
Sbjct: 474 SGLCKAGKQGEAVELWCRLLGKGFVP-----NIVTSNALIHGLCKAGNMQETLKLLRDML 528
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
E D +++N LI CK G + E EL EM KG+ PD YT+ LL+ +++D
Sbjct: 529 ERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKID 588
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
+ + + + +G PN+ Y ++ + ++E ++ + +V KKL+++ Y ++
Sbjct: 589 EASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLI 648
Query: 271 KALSDGGKLD 280
+A G ++
Sbjct: 649 RAYCINGNMN 658
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 127/271 (46%), Gaps = 10/271 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D ++ L+ G D RL+ E K+ G V + YG ++ GY
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKK--NGYVPNVYTYGVMIDGYCKA 619
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EE NE V + +++++V NS++ A C NG + A +L D MK+ + +
Sbjct: 620 NKVEEGENLLNELVSK--KLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKS-----RGV 672
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + G C G DA + +M + P+ + + +I K G + +
Sbjct: 673 LLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNI 732
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EMS ++P+++TY +++D ++ + + A +M + G+ P+ YN L
Sbjct: 733 VLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLC 792
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMM 270
+ G ++EA D M + +D+ +Y ++
Sbjct: 793 KEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 150/321 (46%), Gaps = 11/321 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG ++L+ V+ + + +++ + LGG++ D ++ +++ + E
Sbjct: 215 KGLFPSLKTCTFLLSSLVKANELKKSYEVYDFIC--LGGIIPDVHLFSTMINAFCKGHRE 272
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+ +++ E V + V N+++ LC +G+ DEA + ++M E P +
Sbjct: 273 DDAIGLFSKM--EKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP-----S 325
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +++V +G + +A V ++M E P+ + +N LID CK G ++EA ++
Sbjct: 326 LITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRD 385
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M KG++P+ T L+ + +++ +M+ GL N ++ ++ L
Sbjct: 386 DMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKF 445
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
A F +++++ L+ +D ++ L GK E +E+ +L G +
Sbjct: 446 RFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSN 505
Query: 303 EFVKGELSKEGREEEVVKLME 323
+ G L K G +E +KL+
Sbjct: 506 ALIHG-LCKAGNMQETLKLLR 525
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 9/198 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
+ VVY+ L+ + +G+ + FRL +++K + GV+ Y SLM G G+ ++A
Sbjct: 640 NSVVYNSLIRAYCINGNMNAAFRLRDDMKSR--GVLLSCATYSSLMHGLCNIGLVDDAKH 697
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+E E + + V +++ G+ ++ + M + + P + ++
Sbjct: 698 LLDEMRKE--GLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKF-----TYT 750
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+M DG+C G+ K+A ++ +M E PD +++N + LCK G + EA ++ EMS
Sbjct: 751 IMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSG 810
Query: 189 GVNPDEYTYGLLMDACFE 206
V DE TY L+D C +
Sbjct: 811 AVCLDEITYTTLIDGCHQ 828
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
F A +VF + + P + L+ L K L ++ E+Y + G+ PD + +
Sbjct: 202 FGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFST 261
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-K 258
+++A + +R DD F KM G+ PN+ YN ++ L + G LDEA F + MVK K
Sbjct: 262 MINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK 321
Query: 259 LKMDDASYKFMMKALSDGGKLDE 281
+ +Y + L K+DE
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDE 344
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 135/282 (47%), Gaps = 12/282 (4%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+P + +Y +L G + + +FEE+ K G D + Y SL+ G G +E
Sbjct: 137 CEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRK--GHKPDIIAYSSLIDGLSKAGRVDE 194
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A + + + +AVA S++ LC G+ EA+K M+ +
Sbjct: 195 ARKLVDLMIARGPPP--TAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRL-----RPRVD 247
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+++ + GY G G+ ++A V +M + C+PDT+S+ I+ L G EAE+++ M
Sbjct: 248 TYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETM 307
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+KG PD +TYG+++D + + R M + ++PN +Y ++ V+ L
Sbjct: 308 VEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRL 367
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+EA + ++K + +Y ++ AL K+DE LE++
Sbjct: 368 EEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELL 409
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 146/324 (45%), Gaps = 11/324 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y+ ++ G + G+ D +E++ + Y L+ G E A +
Sbjct: 105 DSVTYTAIVDGLFKAGNYDAGLEYYEKMVA--SKCEPTLLTYTVLVDGLCKAHKVERACD 162
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ E + + K +A +S++D L G+ DEA KL D M PP +A +
Sbjct: 163 VFEEMIRKGH--KPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVA-----YT 215
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ G C GR ++A++ ++M R P +++ ++ G + EA + EM+D+
Sbjct: 216 SIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADR 275
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
PD +Y + ++A + + R ++ F MV+ G +P++ Y ++ + G + A
Sbjct: 276 DCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAA 335
Query: 249 KSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+M K +K + Y +M +L+E LE+ IL D GI S V
Sbjct: 336 THVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKD-GILPSTVTYNTVIN 394
Query: 308 ELSKEGREEEVVKLMEKKEREKAE 331
L K + +E ++L+ + +R K E
Sbjct: 395 ALCKLKKMDEALELLREMQRRKEE 418
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 134/296 (45%), Gaps = 12/296 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V Y+ ++ G + G + +E++ + D Y ++ GY
Sbjct: 202 MIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD--TYSFIVTGYIGM 259
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA E + + ++ ++AL + G+ +EA K+F+ M + P
Sbjct: 260 GKVEEAFAVMEEMADRDCAP--DTISYTMFIEALYSIGRREEAEKVFETMVEKGCKP--- 314
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ ++ D +C +G A V R M + P+ + ++D K+ L EA E
Sbjct: 315 --DMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALE 372
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG--LRPNLAVYNRLVGK 238
LY + G+ P TY +++A ++ ++D+ R+M L P++ Y+ ++
Sbjct: 373 LYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHG 432
Query: 239 LVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
L +VGM + A M+ + D +Y +++ L+ GK+ +E++ +L G
Sbjct: 433 LGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAG 488
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 45/327 (13%)
Query: 2 FVKGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
F + +++P V S+ L+ GF D + V L E+K + G+ S+G +G
Sbjct: 19 FFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKAR--GITSNGATHG-------- 68
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCN--NGKFDEALKLFDRMKNEHNPP 117
V +SA+ LD + N + +EA +LF+ ++
Sbjct: 69 --------------------VILSALCARRDLDKAVSYFNSRTEEACRLFEAIE------ 102
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
A + ++ + DG G + +E + KM +C P L++ L+D LCK +
Sbjct: 103 ---APDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVER 159
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A +++ EM KG PD Y L+D + RVD+ M+ G P Y +V
Sbjct: 160 ACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVA 219
Query: 238 KLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
L + G + EA K+ ++ ++L+ +Y F++ GK++E ++ + D
Sbjct: 220 GLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAP 279
Query: 297 FSEELQEFVKGELSKEGREEEVVKLME 323
+ F++ L GR EE K+ E
Sbjct: 280 DTISYTMFIEA-LYSIGRREEAEKVFE 305
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 17/245 (6%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
NS+L AL G+ +AL F +E N + SFN++ G+ + F+ +
Sbjct: 1 NSLLLALVRGGQLSDALGFFQSSISEPN--------VSSFNILLRGFAARDDFEVVNALL 52
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN-------PDEYTYGLL 200
R+M + + + ++ LC L +A + +++ PD TY +
Sbjct: 53 REMKARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAI 112
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-L 259
+D F+ D G Y+ KMV S P L Y LV L + ++ A F+ M++K
Sbjct: 113 VDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGH 172
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
K D +Y ++ LS G++DE ++V ++ G + V G L K GR +E V
Sbjct: 173 KPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAG-LCKCGRIQEAV 231
Query: 320 KLMEK 324
K +++
Sbjct: 232 KTIQE 236
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGD---SDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M KG D Y ++ F ++G + V RL ++ V + +Y +M G+
Sbjct: 307 MVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDK-----AAVKPNRYIYTMIMDGF 361
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
EEA+E Y + + + S V N+V++ALC K DEAL+L M+
Sbjct: 362 VKSSRLEEALELYQRILKDG--ILPSTVTYNTVINALCKLKKMDEALELLREMQRRK--- 416
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+ L ++ +++++ G G + A ++ +M + PD ++ +LI L G ++
Sbjct: 417 EELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSR 476
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
A EL EM G+ PD++TYG L+ + VD ++M+ +G PN
Sbjct: 477 AMELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPN 526
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 120/267 (44%), Gaps = 15/267 (5%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y+ + G + ++FE + EK G D YG ++ + +G A
Sbjct: 280 DTISYTMFIEALYSIGRREEAEKVFETMVEK--GCKPDMHTYGIIIDNFCKEGSMAAATH 337
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + ++VK + ++D + + +EAL+L+ R+ + P + ++N
Sbjct: 338 VLR--LMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTV-----TYN 390
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYR--CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+ + C + +A+E+ R+M + P ++++ +I L K GM A +L EM
Sbjct: 391 TVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMI 450
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
D GV PD +TY L+ +V +M+ +G+ P+ Y G LVQ+
Sbjct: 451 DNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTY----GTLVQILCRS 506
Query: 247 EAKSFFDIMVKKLKMDDASYKFMMKAL 273
+ + +D++ + ++ +F KA+
Sbjct: 507 DVDAAWDLLQEMMRNGHTPNEFTFKAV 533
>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
Length = 447
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 141/294 (47%), Gaps = 17/294 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
+ + V Y LM GF + G+ L +E+K GV + V++ ++++G G
Sbjct: 25 SYAVNEVSYGILMQGFCKAGEFQQALELLDEMKS--NGVRPNVVIHTTIIRGLCTAGKVS 82
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ + +GE+ + + + +++DALC +G+ EA L M + P N+
Sbjct: 83 QALLHFRR-IGEDCAPNVYTYS--TLVDALCKSGQPHEAYGLVTEMVKKGCSP-----NV 134
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG+ R + + + ++M + C D +++ ++D CKN + EA L
Sbjct: 135 VTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNA 194
Query: 185 MSDKGVNPDEYTYGLLMDA--CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+ + V TY L A E +R + + KM+ G RPN Y ++ L +
Sbjct: 195 LEKRNV----VTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKN 250
Query: 243 GMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
LDEA + + + K DD SYK ++ A ++ G+ + LE++G +L G I
Sbjct: 251 SRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYI 304
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 15/258 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G AD + Y+ ++ F ++ D +RL L+++ + V Y SL
Sbjct: 160 MSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR------NVVTYNSLFTALSTA 213
Query: 61 --GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
EA+ + + E + + + V +VL LC N + DEA ++ M ++
Sbjct: 214 EGDRTTEALSLLEKMIQEGT--RPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTD 271
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ S+ ++ + GR D++E+ +M DT + N +I + CK G L EA
Sbjct: 272 DV-----SYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEA 326
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+L+ M +G P TY L+ A + + D +M+ + +PN+ YN ++
Sbjct: 327 HQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKS 386
Query: 239 LVQVGMLDEAKSFFDIMV 256
+ +EA+ F +MV
Sbjct: 387 FCREQREEEARGIFQMMV 404
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 134/317 (42%), Gaps = 27/317 (8%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY+Y L + G + L E+ +K G + V Y +L+ G+ +E +
Sbjct: 97 PNVYTYSTLVDALCKSGQPHEAYGLVTEMVKK--GCSPNVVTYNALIDGFRKLERLDEVL 154
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS- 126
E + + +LD C N DEA +L + ++ KR V S
Sbjct: 155 MLLKEM--SQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE------KRNVVTYNSL 206
Query: 127 FNVMADGYCGQG-RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
F ++ +G R +A+ + KM + P+ +++ ++ LCKN L EA ++ M
Sbjct: 207 FTALSTA---EGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSM 263
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+G D+ +Y +L+ A R D +M+ SG + N ++ K + G L
Sbjct: 264 YSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDL 323
Query: 246 DEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILD----DGGIEFSEE 300
EA F M ++ + + +Y ++ A + D ++++ ++ I ++
Sbjct: 324 HEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSI 383
Query: 301 LQEFVKGELSKEGREEE 317
++ F +E REEE
Sbjct: 384 IKSF-----CREQREEE 395
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++G+ +F+ + + G+ V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIKLAQSVFDAITK--WGLRPTAVSFNTLMNGYIRLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D A +LF+ M + P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 110/231 (47%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKV 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 103/263 (39%), Gaps = 49/263 (18%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGQGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFR--KMGEYRCSPDTLS-------------------- 161
+ F+ + Y G +DAIE +R K ++R DT
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 162 -------------FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
FN L+ + CK G + A+ ++ ++ G+ P ++ LM+ +
Sbjct: 126 DSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLG 185
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
+D+G M SG++P++ Y+ L+ L + +D A F+ M+ L + ++
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFT 245
Query: 268 FMMKALSDGGKLDEILEIVGGIL 290
++ G++D +EI +L
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQML 268
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 19/294 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ ++ G R+G D L G D V Y +++KG
Sbjct: 206 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY--GFQPDTVSYTTVLKGLCAA 263
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL----CNNGKFDEALKLFDRMKNEHNP 116
E+ E + E + +N + N D L C G + A+++ ++M
Sbjct: 264 KRWEDVEELFAEMMEKN------CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG-- 315
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
A N N++ + C QGR DA + MG Y CSPDT+S+ ++ LC+
Sbjct: 316 ---CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 372
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A+EL EM K P+E T+ + + ++ +M + G N+ YN LV
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 432
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
G +D A F M K + +Y ++ L + +LD E++ +L
Sbjct: 433 NGFCVQGRVDSALELFYSM--PCKPNTITYTTLLTGLCNAERLDAAAELLAEML 484
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 141/294 (47%), Gaps = 13/294 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + V ++ + + G + L E++ E G + V Y +L+ G+ ++
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEH--GCEVNIVTYNALVNGFCVQ 438
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+E + + K + + ++L LCN + D A +L M + P
Sbjct: 439 GRVDSALELF-----YSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAP--- 490
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +FNV+ +C +G +AIE+ +M E+ C+P+ +++N L+D + + EA E
Sbjct: 491 --NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALE 548
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L + GV+PD TY ++ +RV++ F + D G+RP +YN+++ L
Sbjct: 549 LLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALC 608
Query: 241 QVGMLDEAKSFFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ D A FF MV M ++ +Y +++ L++ L E +++ + G
Sbjct: 609 KRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 123/282 (43%), Gaps = 12/282 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D + L++ +G +A A E S + A N+++ C G+ D
Sbjct: 73 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAA--ERSGTAVDVFAYNTLVAGYCRYGQLD 130
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
A +L M +A + ++ + G C +GR +A+ + M C P ++
Sbjct: 131 AARRLIASMP--------VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVT 182
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ L++ +CK+ +A E+ EM KG P+ TY ++++ RVDD + ++
Sbjct: 183 YTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLS 242
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLD 280
G +P+ Y ++ L ++ + F ++M K ++ ++ +++ GG ++
Sbjct: 243 SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVE 302
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
++++ + G + L V + K+GR ++ + +
Sbjct: 303 RAIQVLEQ-MSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
LAEA L + +G PD Y L+ R D A R SG ++ YN
Sbjct: 59 LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
LV + G LD A+ M + D +Y +++ L D G++ E L ++ +L G
Sbjct: 119 LVAGYCRYGQLDAARRLIASM--PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 157/370 (42%), Gaps = 52/370 (14%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V ++ ++ ++G + E++ E+ G+ D + Y +L+ Y G
Sbjct: 378 KGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEE--GLAPDVITYNTLIDAYCKAGNV 435
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR---- 119
+A +E VG+ +KM N+VL LC ++++A +L H+PP+R
Sbjct: 436 AKAFTLMDEMVGKG--LKMDTFTLNTVLYNLCKMKRYEDAEELL------HSPPQRGFVP 487
Query: 120 --------------------------------LAVNLGSFNVMADGYCGQGRFKDAIEVF 147
L ++ ++N + G C R K+AI+
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ E PD ++N +I CK G L A + +M + PD T LM+
Sbjct: 548 NEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASY 266
++D F V+ G + ++ YN L+ + +VG +D A FFD M VK L+ D +Y
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
++ ALS+ G+ +E ++ + D G + Q F L +E VK E K
Sbjct: 668 NVVLSALSEAGRSEEAHNMLHKLADSGKLS-----QSFACPLLKPSSADEADVKEHEGKP 722
Query: 327 REKAEAKARE 336
++ KA++
Sbjct: 723 EAESSEKAQD 732
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 111/257 (43%), Gaps = 26/257 (10%)
Query: 80 VKMSAVANNSVLDALCNNGKF--DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
V+ S A N+VL AL + +L +F + RL N +FN++ +C +
Sbjct: 167 VRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIE-----LRLHPNHYTFNLLVHTHCSK 221
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
G DA+ M + SPD +++N L++ C+ GML EA L M G+ P + TY
Sbjct: 222 GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTY 281
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-- 255
L+ A + + M G P+L YN L L Q G +DEA D M
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMER 341
Query: 256 --------VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
V + DA +K+ + SD +L E + D G++ + V
Sbjct: 342 LGTALPDVVTYNTLVDACFKW--RCSSDALRLLEEMR-------DKGVKPTLVTHNIVVK 392
Query: 308 ELSKEGREEEVVKLMEK 324
L KEG+ EE + +EK
Sbjct: 393 SLCKEGKLEEALGKLEK 409
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 129/316 (40%), Gaps = 79/316 (25%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GF D Y+ L +G + G D FRL +E+ E+LG + D V Y +L+ F
Sbjct: 304 MTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEM-ERLGTALPDVVTYNTLVDACF-- 360
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
C ++A L+L + M++ K +
Sbjct: 361 -----KWRCSSDA------------------------------LRLLEEMRD-----KGV 380
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
L + N++ C +G+ ++A+ K+ E +PD +++N LID CK G +A+A
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFT 440
Query: 181 LYGEMSDKGVN-----------------------------------PDEYTYGLLMDACF 205
L EM KG+ PDE +YG +M A F
Sbjct: 441 LMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYF 500
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDA 264
+ + + +M++ L P+++ YN L+ L ++ L EA + V+K L D+
Sbjct: 501 KEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDET 560
Query: 265 SYKFMMKALSDGGKLD 280
+Y ++ A G L+
Sbjct: 561 TYNIIIHAYCKEGDLE 576
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 107/223 (47%), Gaps = 9/223 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ D V Y +L+ + KGM EA A + + + N+++ A G
Sbjct: 238 GLSPDAVTYNTLLNAHCRKGMLGEARALL--ARMKRDGIAPTQPTYNTLVSAFARLGWIK 295
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-PDTL 160
+A K+ + M P +L ++NV+A G C G+ +A + +M + PD +
Sbjct: 296 QATKVVESMTAYGFEP-----DLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVV 350
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N L+D K ++A L EM DKGV P T+ +++ + + ++++ K+
Sbjct: 351 TYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKI 410
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMD 262
+ GL P++ YN L+ + G + +A + D MV K LKMD
Sbjct: 411 AEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 97/235 (41%), Gaps = 45/235 (19%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V D Y+ ++ + ++GD + FR ++ E D V +LM G + G
Sbjct: 553 KGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVE--NSFKPDVVTCNTLMNGLCLHGKL 610
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A++ + V + K+ + N+++ ++C G D AL FD M+ K L +
Sbjct: 611 DKALKLFESWVEKGK--KVDVITYNTLIQSMCKVGDVDTALHFFDDMEV-----KGLQPD 663
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGE-------YRCS---PDTL------------- 160
++NV+ GR ++A + K+ + + C P +
Sbjct: 664 AFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPE 723
Query: 161 -------------SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
++ ++ LC G L EA+ + EM KG+ D TY LM+
Sbjct: 724 AESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLME 778
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 122/276 (44%), Gaps = 39/276 (14%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ D V YG+++ G G + A+ ++ E + +K V ++++D LC +G
Sbjct: 40 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM--EETHIKPDVVIYSAIIDRLCKDGHHS 97
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A LF M K +A N+ ++N M DG+C GR+ DA + R M E +PD L+
Sbjct: 98 DAQYLFSEMLE-----KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 152
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY------------------------ 197
FN LI K G L EAE+L EM + + PD TY
Sbjct: 153 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 212
Query: 198 -------GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
++D RVD+G R++ GL N YN L+ +V L+ A+
Sbjct: 213 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 272
Query: 251 FFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
F M+ + D + ++ + KL+E LE+
Sbjct: 273 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 308
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 131/278 (47%), Gaps = 14/278 (5%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V+YS ++ +DG LF E+ EK G+ + Y ++ G+ G +A
Sbjct: 79 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK--GIAPNVFTYNCMIDGFCSFGRWSDAQR 136
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + + + N+++ A GK EA KL D M + P + ++N
Sbjct: 137 LLRDMI--EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV-----TYN 189
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
M G+C RF DA +F M SPD ++FN +ID C+ + E +L E+S +
Sbjct: 190 SMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 245
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ + TY L+ EV+ ++ F++M+ G+ P+ N L+ + L+EA
Sbjct: 246 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 305
Query: 249 KSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
F+++ + K+ +D +Y ++ + G K+DE ++
Sbjct: 306 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 343
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 114/233 (48%), Gaps = 6/233 (2%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ N++++ LC G+ EA L ++M K L +++ ++ + +G C G K A
Sbjct: 10 VITFNTLINGLCLEGRVLEAAALVNKMVG-----KGLHIDVVTYGTIVNGMCKMGDTKSA 64
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ + KM E PD + ++ +ID+LCK+G ++A+ L+ EM +KG+ P+ +TY ++D
Sbjct: 65 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM-D 262
R D R M++ + P++ +N L+ V+ G L EA+ D M+ + D
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
+Y M+ + D+ + + + F+ + + + + EG +
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 237
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 120/281 (42%), Gaps = 13/281 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D V Y+ ++ GF + D +F+ + D V + +++ Y
Sbjct: 176 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP------DVVTFNTIIDVYCRA 229
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+E M+ E + + N+++ C + A LF M + P +
Sbjct: 230 KRVDEGMQLLREI--SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 287
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++ G+C + ++A+E+F + + DT+++N +I +CK + EA +
Sbjct: 288 TCN-----ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 342
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ + GV PD TY +++ + + D F KM D+G P+ + YN L+ +
Sbjct: 343 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 402
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ G +D++ M DA M+ L G+LD+
Sbjct: 403 KAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDK 443
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M E +P ++FN LI+ LC G + EA L +M KG++ D TYG +++ ++
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
KM ++ ++P++ +Y+ ++ +L + G +A+ F M++K + + +Y
Sbjct: 61 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120
Query: 269 MMKALSDGGKLDE 281
M+ G+ +
Sbjct: 121 MIDGFCSFGRWSD 133
>gi|242070261|ref|XP_002450407.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
gi|241936250|gb|EES09395.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
Length = 462
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 149/323 (46%), Gaps = 11/323 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ R D + ++E GV D V Y SL+ G G+
Sbjct: 42 GLPPDVVTYNTLLAAHCRVAGLDAGIAVVHRMRE--AGVRPDAVTYNSLITGADRSGLTV 99
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ ++E + S V + + N+++ L +G + A ++F M + K +A
Sbjct: 100 RALDLFDEML--RSGVAPDSWSYNALMHCLFRSGHPEHAYRVFADMAD-----KGVAPCA 152
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG G +A +FR + +++N +I+ LCK+G + A + E
Sbjct: 153 TTYNTLLDGLFKAGHATNAYRMFRYLQRAGLPVGIVTYNTMINGLCKSGKVGYARMVLKE 212
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ P+ TY +M CF R + G F +++ G + Y ++ LV+ G
Sbjct: 213 LGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFLSLLEGGYISDAFPYTTVISALVKKGR 272
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+ EA ++ ++M++ +D+A Y ++ GK+D+ E++ ++++GG+E E
Sbjct: 273 MQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKIDDAFELL-NMMEEGGLESDEYTFS 331
Query: 304 FVKGELSKEGREEEVVKLMEKKE 326
+ L K G+ E K + E
Sbjct: 332 ILVNGLCKMGQIEAAEKQIWSME 354
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 6/207 (2%)
Query: 74 VGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADG 133
V + + +S N L ALC G D A + PP ++ ++N +
Sbjct: 2 VRSRAQLALSTRLMNVGLAALCRGGWLDRAESVVVDAIRLGLPP-----DVVTYNTLLAA 56
Query: 134 YCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD 193
+C I V +M E PD +++N+LI ++G+ A +L+ EM GV PD
Sbjct: 57 HCRVAGLDAGIAVVHRMREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPD 116
Query: 194 EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
++Y LM F + F M D G+ P YN L+ L + G A F
Sbjct: 117 SWSYNALMHCLFRSGHPEHAYRVFADMADKGVAPCATTYNTLLDGLFKAGHATNAYRMFR 176
Query: 254 IMVKK-LKMDDASYKFMMKALSDGGKL 279
+ + L + +Y M+ L GK+
Sbjct: 177 YLQRAGLPVGIVTYNTMINGLCKSGKV 203
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 126/308 (40%), Gaps = 37/308 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ LM R G + +R+F ++ +K GV Y +L+ G F
Sbjct: 108 MLRSGVAPDSWSYNALMHCLFRSGHPEHAYRVFADMADK--GVAPCATTYNTLLDGLFKA 165
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPK- 118
G A + + + + + V N++++ LC +GK A + + + EH P
Sbjct: 166 GHATNAYRMFRYL--QRAGLPVGIVTYNTMINGLCKSGKVGYARMVLKELGRTEHAPNAV 223
Query: 119 ------RLAVNLGSF--------NVMADGYCG--------------QGRFKDAIEVFRKM 150
+ G F +++ GY +GR ++A M
Sbjct: 224 TYTTVMKCCFRYGRFEQGLETFLSLLEGGYISDAFPYTTVISALVKKGRMQEANTYCELM 283
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+ + D +N LI C+ G + +A EL M + G+ DEYT+ +L++ ++ ++
Sbjct: 284 IQSGSTLDNACYNTLIHLRCQEGKIDDAFELLNMMEEGGLESDEYTFSILVNGLCKMGQI 343
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM 270
+ M ++ N+ YN L+ L + +D A M +LK DD +Y ++
Sbjct: 344 EAAEKQIWSMEMMDMQSNVVAYNCLIDALCKCHEVDAAIKILHSM--RLK-DDFTYTSLV 400
Query: 271 KALSDGGK 278
L G+
Sbjct: 401 HGLCKVGR 408
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 141/324 (43%), Gaps = 35/324 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D V Y+ L+ G+ R G+ F LF+EL+ + V Y +L+ G +
Sbjct: 365 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY--LFPTIVTYNTLLDGLCRQ 422
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE------- 113
G E A + E + N + V +++ C G A + FD M +E
Sbjct: 423 GELEVAQQLKVEMI--NEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSY 480
Query: 114 -----------------------HNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
K +L +NV+ DG C G ++A E+ +KM
Sbjct: 481 AYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKM 540
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
PD +++ ++I +NG L + E++ EM KG+ P TY +L+ R+
Sbjct: 541 VSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRL 600
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+ YF +M + G+ PN+ YN L+ L +V +D+A +FF MV+K + + SY +
Sbjct: 601 ERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTIL 660
Query: 270 MKALSDGGKLDEILEIVGGILDDG 293
+ + G E L + +LD G
Sbjct: 661 INENCNMGNWQEALSLYKQMLDRG 684
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 157/326 (48%), Gaps = 32/326 (9%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-----VYGSLMKGYF 58
+G + V Y+ L+ G + G+ FE+ K +G ++ G+ Y L+ GYF
Sbjct: 263 RGCAPNDVTYNVLINGLSKKGE-------FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 315
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK-LFDRMKNEHNPP 117
KGM EA+ E V + +S ++ NS + LC G+ +A++ L D + N P
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATY--NSFIYGLCKLGRMSDAMQQLSDMLANNLLP- 372
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
++ S+N + GYC G A +F ++ P +++N L+D LC+ G L
Sbjct: 373 -----DVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEV 427
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY-NRLV 236
A++L EM ++G+ PD TY +L++ ++ + +F +M+ GL + Y R+V
Sbjct: 428 AQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIV 487
Query: 237 GKLVQVGMLDEAKSFF---DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
G+L ++G D +++F +++ K D Y ++ L G L+E E++ ++ DG
Sbjct: 488 GEL-KLG--DTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDG 544
Query: 294 GIEFSEELQEFVKGELS----KEGRE 315
I + L ++GRE
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGRE 570
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 124/239 (51%), Gaps = 9/239 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ ++G ++ GD+ F L EE+ K G D ++Y ++ G
Sbjct: 470 MLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAK--GFPPDLIIYNVVVDGLCKL 527
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA E + V + V V S++ A NG+ + ++F M + K L
Sbjct: 528 GNLEEASELLQKMVSDG--VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLS-----KGL 580
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ V+ G+ G+GR + A F +M E P+ +++N+LI+ LCK + +A
Sbjct: 581 TPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYN 640
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ EM +KG+ P++Y+Y +L++ + + + +++M+D G++P+ ++ L+ +L
Sbjct: 641 FFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 138/322 (42%), Gaps = 30/322 (9%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V Y+ L+ + + G L E++ + G + V Y L+ G KG E
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRR--GCAPNDVTYNVLINGLSKKGEFE 286
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E + + +K+SA N ++ N G EAL L + M + P +
Sbjct: 287 QAKGLIGEML--KTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASP-----TV 339
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N G C GR DA++ M PD +S+N LI C+ G L +A L+ E
Sbjct: 340 ATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 399
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ + P TY L+D ++ +M++ G+ P++ Y LV ++G
Sbjct: 400 LRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGS 459
Query: 245 LDEAKSFFDIM----------------VKKLKMDDASYKFMMK--ALSDGGKLDEILE-- 284
L A+ FFD M V +LK+ D S F ++ L+ G D I+
Sbjct: 460 LSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNV 519
Query: 285 IVGGILDDGGI-EFSEELQEFV 305
+V G+ G + E SE LQ+ V
Sbjct: 520 VVDGLCKLGNLEEASELLQKMV 541
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 7/194 (3%)
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
K + +A+E Y +GE +K + V N++LD+ C GK + L L M+ P
Sbjct: 212 KDLMSKAVEVY-RTMGE-FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAP-- 267
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N ++NV+ +G +G F+ A + +M + ++N LI GMLAEA
Sbjct: 268 ---NDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEAL 324
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L EM KG +P TY + ++ R+ D M+ + L P++ YN L+
Sbjct: 325 SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGY 384
Query: 240 VQVGMLDEAKSFFD 253
++G L +A FD
Sbjct: 385 CRLGNLMKAFLLFD 398
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 93/191 (48%), Gaps = 6/191 (3%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
++ L +FD+M RL+ ++ + N + + A+EV+R MGE+ P +
Sbjct: 181 EQCLSVFDKMIKS-----RLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N L+D CK G + + +L EM +G P++ TY +L++ + + +M
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
+ +GL+ + YN L+ GML EA S + MV K A+Y + L G++
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355
Query: 280 DEILEIVGGIL 290
+ ++ + +L
Sbjct: 356 SDAMQQLSDML 366
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 129/304 (42%), Gaps = 16/304 (5%)
Query: 21 VRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSV 80
+R+ S+ F + L + G V+ D ++ ++ + + A+ + A +
Sbjct: 57 IREKPSN--FSNYYWLSHQFGPVIVDPDLFVRVLSSF--RTSPRMALRLFRWAESQ-PGF 111
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRM--KNEHNPPKRLA-------VNLGSFNVMA 131
+ S ++L+ L N A + +R+ N H L V++ +++
Sbjct: 112 RRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLI 171
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
Y + + + VF KM + R SPD + N ++ L ++++A E+Y M + G+
Sbjct: 172 WVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIK 231
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P TY L+D+ + +V G +M G PN YN L+ L + G ++AK
Sbjct: 232 PTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGL 291
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELS 310
M+K LK+ +Y ++ + G L E L + ++ G F+ G L
Sbjct: 292 IGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG-LC 350
Query: 311 KEGR 314
K GR
Sbjct: 351 KLGR 354
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 148/341 (43%), Gaps = 53/341 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + +LG+ R D D FR+FEE+ +
Sbjct: 218 MIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR--------------------- 256
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
NE V+ N ++ LC G+ DEA+ LF RMK++ P
Sbjct: 257 ----------NE------------VSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYP--- 291
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + G C + K A+ + +M E PD +++N+LI C+ G L A
Sbjct: 292 --NVYTYTALIKGLCRKNVHK-AMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYR 348
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M ++G+ PD+ TYG +D + NRV++ F + + G+ N+ +Y+ L+
Sbjct: 349 LLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYC 408
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKF--MMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+VG +DEA F+ M+ K +Y F ++ L G L E L + ++ G++ +
Sbjct: 409 KVGKVDEAGCLFEKMLSK-NCSPNAYTFNALIHGLCSAGNLKEALSLFDQMV-KMGLKPT 466
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+ G + K+G ++ K ++K + AR A
Sbjct: 467 VYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNA 507
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 13/257 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + V D + Y+ L+ G R G D +RL +KE+ G+V D YG +
Sbjct: 318 MLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKER--GLVPDQRTYGCFIDFLCKS 375
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA ++ E V + + + ++D C GK DEA LF++M +++ P
Sbjct: 376 NRVEEARRLFDSLTEEG--VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSP--- 430
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +FN + G C G K+A+ +F +M + P +FN LI ++ K G +A +
Sbjct: 431 --NAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHK 488
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+M G P TY ++ +V + +M + G+ P+ Y L+
Sbjct: 489 CLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYG 548
Query: 241 QVGM----LDEAKSFFD 253
++G+ D KS FD
Sbjct: 549 KLGLTYSAFDVLKSMFD 565
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 22/259 (8%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
K+S N +L L G DE +L+ M E +++++ +FN+M + YC G
Sbjct: 153 TKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEF-----VSMDIYTFNLMINVYCKMGF 207
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
K+A + KM + SPD + + I C++ + A ++ EM ++ +E +Y
Sbjct: 208 VKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQ 263
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ------VGMLDEAKSFFD 253
L+ E R+D+ + F +M D PN+ Y L+ L + +G+LDE
Sbjct: 264 LIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGLLDE------ 317
Query: 254 IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
++ + L D +Y ++ G LD ++ + + G + F+ L K
Sbjct: 318 MLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDF-LCKSN 376
Query: 314 REEEVVKLMEKKEREKAEA 332
R EE +L + E A
Sbjct: 377 RVEEARRLFDSLTEEGVSA 395
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 138/373 (36%), Gaps = 65/373 (17%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D Y + + + RLF+ L E+ GV ++ ++Y L+ GY G
Sbjct: 356 RGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEE--GVSANVIMYSVLIDGYCKVGKV 413
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + + + +N S +A N+++ LC+ G EAL LFD+M P N
Sbjct: 414 DEAGCLFEKMLSKNCSP--NAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFN 471
Query: 124 L------------------------------GSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
+ ++N + YC G+ ++A ++ +M E
Sbjct: 472 ILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEE 531
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV--- 210
PD ++ +LI K G+ A ++ M D P +T+ L+ F+ V
Sbjct: 532 GVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEK 591
Query: 211 --------------------------DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
D F +M G P+ Y +L+ + +V
Sbjct: 592 SGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVEN 651
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L A D M K+ + + + ++ K E IV ++ G E +
Sbjct: 652 LGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKT 711
Query: 304 FVKGELSKEGREE 316
+ G L +EG E
Sbjct: 712 LICG-LYEEGETE 723
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 146/371 (39%), Gaps = 81/371 (21%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLG---GVVSDGVVYGSLMKGYFMKGM 62
P Y++ L+ G G+ LF+++ K+G V + ++ G ++K +G
Sbjct: 428 CSPNAYTFNALIHGLCSAGNLKEALSLFDQMV-KMGLKPTVYTFNILIGRMLK----QGD 482
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK---- 118
++A +C + + +S K A N+ ++ C+ GK EA + +MK E PP
Sbjct: 483 FDDAHKCLQKMM--SSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTY 540
Query: 119 --------RLAVNLGSFNV---MADGYCGQGR---------------------------- 139
+L + +F+V M D C
Sbjct: 541 TSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESV 600
Query: 140 ----------------FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
F IE+F +M ++ C+PD+ + LI +CK L A +L
Sbjct: 601 SNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLD 660
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M +G++P E + ++ C ++ + + A M+ SG P L L+ L + G
Sbjct: 661 QMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEG 720
Query: 244 MLDEAKSFFDIMVKKLKM-----DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ S F KKL+ D+ ++K ++ + G ++E ++ ++ G FS
Sbjct: 721 ETERGNSVF----KKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEE-MEKNGCNFS 775
Query: 299 EELQEFVKGEL 309
+ +L
Sbjct: 776 PRTYSILTQKL 786
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 80/168 (47%), Gaps = 4/168 (2%)
Query: 145 EVFRKMGEYRCSPDTL-SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
++ RKM + + +L +N L+ L + G++ E +LY EM ++ V+ D YT+ L+++
Sbjct: 142 DICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINV 201
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD 263
++ V + + KM+ +GL P+ + + +D A F+ M + ++
Sbjct: 202 YCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR---NE 258
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSK 311
SY ++ L + G++DE + + + DD +KG K
Sbjct: 259 VSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK 306
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 19/261 (7%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ + V NS++D C + ++A +FD M + + + N+ S+ M +G C
Sbjct: 311 IILDVVTYNSLMDGYCLVKEINKAKDIFDSMAS-----RGVIANVQSYTTMINGLCKIKM 365
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+A+ +F +M + P+ +++N+LID L K G ++ +L EM D+G P+ TY
Sbjct: 366 VDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNS 425
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKK 258
++DA + + VD + D G+RP++ Y L+ L Q G L++A+ F D++VK
Sbjct: 426 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKG 485
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
+D +Y M++ G D L ++ + D+G I + + E +
Sbjct: 486 YNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIP-------------NAKTYEIVI 532
Query: 319 VKLMEKKEREKAEAKAREAEA 339
+ L EK E + AE RE A
Sbjct: 533 LSLFEKDENDMAEKLLREMIA 553
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 149/324 (45%), Gaps = 35/324 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G V+D ++ L+ F + G + F +F ++ +K G + + + +L+KG +K
Sbjct: 96 MELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKK--GFDPNAITFNTLIKGLCLK 153
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
G +A+ +++ V + + V+ ++++ LC G+ AL+L R+ + P
Sbjct: 154 GHIHQALNFHDKVVAQ--GFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAV 211
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
KR++ + + N + G+C G+ K+A+ + KM
Sbjct: 212 MYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKM 271
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+P +F+ L+D CK G + EA+ + G K + D TY LMD V +
Sbjct: 272 ILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEI 331
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFM 269
+ F M G+ N+ Y ++ L ++ M+DEA + F+ M +K+ + +Y +
Sbjct: 332 NKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSL 391
Query: 270 MKALSDGGKLDEILEIVGGILDDG 293
+ L GK+ +L++V + D G
Sbjct: 392 IDGLGKLGKISCVLKLVDEMHDRG 415
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 93/195 (47%), Gaps = 6/195 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +L +L AL L +M+ + + +FN++ + + G + VF
Sbjct: 74 NKILSSLVKAKHHSTALSLHQQME-----LNGIVSDFFTFNILINCFSQLGLNSLSFSVF 128
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
K+ + P+ ++FN LI LC G + +A + ++ +G + D+ +YG L++ +V
Sbjct: 129 GKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKV 188
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASY 266
R+ +++ ++PN +YN ++ + + ++++A + MV K++ DD +
Sbjct: 189 GRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTC 248
Query: 267 KFMMKALSDGGKLDE 281
++ G+L E
Sbjct: 249 NSLIYGFCIMGQLKE 263
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+P + FN ++ L K + A L+ +M G+ D +T+ +L++ ++ +
Sbjct: 67 TPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFS 126
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALS 274
F K++ G PN +N L+ L G + +A +F D ++ + +D SY ++ L
Sbjct: 127 VFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLC 186
Query: 275 DGGKLDEILEIV----GGILDDGGIEFSEELQEFVKGEL 309
G++ L+++ G ++ + ++ + K +L
Sbjct: 187 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKL 225
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 4/142 (2%)
Query: 107 FDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
F+ + + NP + FN + A+ + ++M D +FN LI
Sbjct: 57 FNSLLHHKNPTPPII----QFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILI 112
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
+ + G+ + + ++G++ KG +P+ T+ L+ + + K+V G
Sbjct: 113 NCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFH 172
Query: 227 PNLAVYNRLVGKLVQVGMLDEA 248
+ Y L+ L +VG + A
Sbjct: 173 LDQVSYGTLINGLCKVGRITAA 194
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 147/281 (52%), Gaps = 10/281 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y L+ G + G D +RLFE++ + G ++ VVY SL++ +F+ G +
Sbjct: 186 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLD--AGHNANPVVYTSLIRNFFIHGRK 243
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+ + + E + ++ + N+ +D + G+ ++ +F+ +++ P +
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLL--NTYMDCVFKAGEVEKGRMIFEDIRSYGFLP-----D 296
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S++++ G G+ ++ +F M + + D ++N ++D CK+G + +A E+
Sbjct: 297 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILE 356
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +K V P TYG ++D +++R+D+ F + G+ N+ +Y+ L+ +VG
Sbjct: 357 EMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 416
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
+DEA + M+KK L + ++ ++ AL +++E L
Sbjct: 417 RIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 457
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 150/338 (44%), Gaps = 12/338 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y+ ++ + G LF +++ + V Y +++ GY G
Sbjct: 12 QGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS--VPCAYAYNTMIMGYGSAGRF 69
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A + E + E + S V+ NS+L L K DEAL LF+ MK + P N
Sbjct: 70 EDAYKLL-ERLRERGCIP-SVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP------N 121
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N++ D C GR ++A + +M P+ L+ N ++D+LCK L EA +++
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
S +G NPD TY L+D + +VD+ F KM+D+G N VY L+ G
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 241
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++ F ++++ K D M + G++++ I I G +
Sbjct: 242 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 301
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAA 340
+ G L+K G+ E + +++ AR A
Sbjct: 302 ILIHG-LTKAGQARETSNIFHAMKQQGFALDARAYNAV 338
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 137/288 (47%), Gaps = 12/288 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF+ D YS L+ G + G + +F +K++ G D Y +++ G+ G
Sbjct: 292 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ--GFALDARAYNAVVDGFCKSGKVH 349
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E E + V+ + +++D L + DEA LF+ K+ K + +N+
Sbjct: 350 KAYEILEEM--KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS-----KGIELNV 402
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG+ GR +A + +M + +P+ ++N+L+D L K + EA +
Sbjct: 403 VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 462
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + P+ YTY +L++ V + + +++ M GL PN+ Y ++ L +VG
Sbjct: 463 MKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGN 522
Query: 245 LDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILD 291
+ +A S F+ + D AS+ +++ +S+ + E + G LD
Sbjct: 523 ITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ--AGWLD 568
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 74/144 (51%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A + F ++ PD +S+ ++I LCK G L EAEEL+ +M + P Y Y ++
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMD 262
R +D ++ + G P++ +N ++ L + +DEA S F++M K + +
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 121
Query: 263 DASYKFMMKALSDGGKLDEILEIV 286
++Y ++ L GG+++E I+
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRIL 145
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V+YS L+ GF + G D + + EE+ +K G+ + + SL+
Sbjct: 396 KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK--GLTPNVYTWNSLLDALVKAEEI 453
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA+ C+ + + + +++ LC K+++A + M+ + P N
Sbjct: 454 NEALVCFQSM--KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVP-----N 506
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
+ ++ M G G DA +F + PD SFN LI+
Sbjct: 507 VVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE 550
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 147/348 (42%), Gaps = 36/348 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V++ L+ + R G D +FE+++ K G++ D V + +++
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK--GMIPDTVTFATVISSLCRI 394
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-- 118
G ++A+ +N V + V S ++ CN+G+ +A +L M N+ PP
Sbjct: 395 GRLDDALHKFNHMV--DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 452
Query: 119 --------------RLA---------------VNLGSFNVMADGYCGQGRFKDAIEVFRK 149
R+A N+ +FN + +GYC G ++A +
Sbjct: 453 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 512
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M P+ + L+D CKNG + +A ++ +M KGV P Y +++ F+ R
Sbjct: 513 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 572
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKF 268
F +M++SG ++ Y ++G L + DEA + + +K D ++
Sbjct: 573 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 632
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
++ A+ G+ E E+ I G + + + + +E EE
Sbjct: 633 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 680
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 13/261 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS ++ G + D R+ E++ E G + + Y SL+ GY +
Sbjct: 195 MVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE--AGTRPNSITYNSLIHGYSIS 252
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVAN-NSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
GM E++ + + +S + V N NS + AL +G+ +EA +FD M + P
Sbjct: 253 GMWNESVRVFKQM---SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKP-- 307
Query: 120 LAVNLGSFNVMADGYCG--QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
++ S++ M GY D +F M +P+ FN LI+ + GM+ +
Sbjct: 308 ---DIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 364
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A ++ +M +KG+ PD T+ ++ + + R+DD F MVD G+ P+ AVY L+
Sbjct: 365 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQ 424
Query: 238 KLVQVGMLDEAKSFFDIMVKK 258
G L +AK M+ K
Sbjct: 425 GCCNHGELVKAKELISEMMNK 445
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 141/294 (47%), Gaps = 31/294 (10%)
Query: 13 YSY-LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF-MKGMEEEAMECY 70
+SY L+ GFV+DG+ D LF E+ E+ GV+ ++ S++K MK M++
Sbjct: 136 FSYSLIYGFVKDGEVDKAHCLFLEMMEQ--GVLPKILICNSIIKELCKMKEMDKA----- 188
Query: 71 NEAVGE---NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E++ + +S + + ++D LC + D+A ++ ++M P + ++
Sbjct: 189 -ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSI-----TY 242
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + GY G + +++ VF++M P + N+ I L K+G EA+ ++ M
Sbjct: 243 NSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVL 302
Query: 188 KGVNPDEYTYGLLM-------DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
KG PD +Y ++ D+C D F M+ G+ PN V+N L+
Sbjct: 303 KGPKPDIISYSTMLHGYATATDSCLA-----DVHNIFNLMLTKGIAPNKHVFNILINAYA 357
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ GM+D+A F D+ K + D ++ ++ +L G+LD+ L ++D G
Sbjct: 358 RCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 411
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 120/318 (37%), Gaps = 76/318 (23%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + D V ++ ++ R G D F + + GV VYG L++G G
Sbjct: 375 KGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI--GVPPSEAVYGCLIQGCCNHGEL 432
Query: 64 EEAMECYNEAVGEN---------SSV-------------------------KMSAVANNS 89
+A E +E + ++ SS+ + + V NS
Sbjct: 433 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 492
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+++ C G +EA L D M + P N + + DGYC GR DA+ VFR
Sbjct: 493 LMEGYCLVGNMEEAFALLDAMASIGIEP-----NCYIYGTLVDGYCKNGRIDDALTVFRD 547
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG----------- 198
M P ++ ++ ++ L + A++++ EM + G +TYG
Sbjct: 548 MLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNC 607
Query: 199 ------------------------LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+++ A F+V R + F + GL PN+ Y+
Sbjct: 608 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSM 667
Query: 235 LVGKLVQVGMLDEAKSFF 252
++ L++ +EA + F
Sbjct: 668 MITNLIKEESYEEADNLF 685
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 111/245 (45%), Gaps = 9/245 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ LM G+ G+ + F L + + G+ + +YG+L+ GY G ++A+ +
Sbjct: 488 VTFNSLMEGYCLVGNMEEAFALLDAMASI--GIEPNCYIYGTLVDGYCKNGRIDDALTVF 545
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + VK ++V + +L L + A K+F M V++ ++ V+
Sbjct: 546 RDML--HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGT-----TVSIHTYGVV 598
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C +A + K+ D ++FN +I + K G EA+EL+ +S G+
Sbjct: 599 LGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGL 658
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ TY +++ + ++ F + SG + + N +V L+ + +A +
Sbjct: 659 VPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASN 718
Query: 251 FFDIM 255
+ I+
Sbjct: 719 YLSII 723
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 84/182 (46%), Gaps = 7/182 (3%)
Query: 148 RKMGEYRC---SPDTL-SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
++M + C SP T+ ++N LID + + G + G+ PD+++Y L+
Sbjct: 85 QRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGF 144
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
+ VD F +M++ G+ P + + N ++ +L ++ +D+A+S MV + D
Sbjct: 145 VKD-GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 203
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+Y ++ L +D+ ++ +++ G S + G S G E V++
Sbjct: 204 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG-YSISGMWNESVRVF 262
Query: 323 EK 324
++
Sbjct: 263 KQ 264
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 135/294 (45%), Gaps = 10/294 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF + + Y L+ G + GD + LF E+ + G+ D Y L++GY+
Sbjct: 363 MFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMT--MMGIKPDIQTYNCLIEGYYKV 420
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E+A E E EN + +A ++++ LC+ G A +LF M + P
Sbjct: 421 QNMEKAYELLIEIKKEN--LTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKP--- 475
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ + + G +GRF++AI++ M + SPD +N +I CK G + E +
Sbjct: 476 --NIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKS 533
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
EM KG+ P+ YTYG + + F +M+DSG+ PN + L+
Sbjct: 534 YLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYC 593
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ G +A + F M+ + + D ++ ++ LS GKL E + + +LD G
Sbjct: 594 KDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 161/354 (45%), Gaps = 35/354 (9%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V D Y+ L+ ++GD F L +++ +K G+ + V Y +L+ G G
Sbjct: 646 KGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKK--GINPNIVTYNALINGLCKLGEI 703
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------ 117
+A E + + + E + ++V ++++ C + EA +LF MK PP
Sbjct: 704 AKARELF-DGIPEKGLAR-NSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYC 761
Query: 118 -------------KRLAVNLG----------SFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
K L++ LG +FN + DG+ G+ +A ++ M +
Sbjct: 762 ALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNH 821
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
+P+ +++ LI+ C G + EAE+L+ EM + V P+ TY L+ + R +
Sbjct: 822 ITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMF 881
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
+ F +MV G++P+ ++ +V ++ G +A D M+ + + + Y ++ AL
Sbjct: 882 SLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDAL 941
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
L E+L+++ + + G + S + + GR +E ++++E R
Sbjct: 942 CKHNNLSEVLKVLDEV-EKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVR 994
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 10/276 (3%)
Query: 19 GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENS 78
G GD LF+E+ G+ + V+Y +++KG +G EEA++ V ++
Sbjct: 451 GLCHCGDLTRANELFQEMIS--WGLKPNIVIYTTIVKGLVKEGRFEEAIKIL--GVMKDQ 506
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQG 138
+ N+V+ C GK +E M K L N+ ++ GYC G
Sbjct: 507 GLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEM-----IAKGLKPNVYTYGAFIHGYCRAG 561
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ A F +M + +P+ + +LID CK+G +A + M D+GV PD T+
Sbjct: 562 EMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHS 621
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+L+ + ++ + F +++D GL P++ Y L+ L + G L A D M KK
Sbjct: 622 VLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKK 681
Query: 259 -LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ + +Y ++ L G++ + E+ GI + G
Sbjct: 682 GINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG 717
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 146/326 (44%), Gaps = 22/326 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-----VYGSLMKGYF 58
+G D Y+ +++GF + G EE K L +++ G+ YG+ + GY
Sbjct: 506 QGLSPDVFCYNTVIIGFCKAGK-------MEEGKSYLVEMIAKGLKPNVYTYGAFIHGYC 558
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G + A + E + +S + + V ++D C +G +A F M ++ P
Sbjct: 559 RAGEMQAAERSFIEML--DSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLP- 615
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ + +V+ G G+ ++A+ VF ++ + PD ++ +LI LCK G L A
Sbjct: 616 ----DVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAA 671
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EL+ +M KG+NP+ TY L++ ++ + F + + GL N Y+ ++
Sbjct: 672 FELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAG 731
Query: 239 LVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
+ L EA F M + + D Y ++ G ++ L + G++++ GI
Sbjct: 732 YCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEE-GIAS 790
Query: 298 SEELQEFVKGELSKEGREEEVVKLME 323
+ + G K G+ E +L+E
Sbjct: 791 TPAFNALIDG-FFKLGKLIEAYQLVE 815
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 137/295 (46%), Gaps = 15/295 (5%)
Query: 1 MFVKGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF 58
M KG P VY+Y + G+ R G+ R F E+ + G+ + V+ L+ GY
Sbjct: 538 MIAKGL--KPNVYTYGAFIHGYCRAGEMQAAERSFIEMLD--SGIAPNDVICTDLIDGYC 593
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVL-DALCNNGKFDEALKLFDRMKNEHNPP 117
G +A + + + + V +SVL L NGK EA+ +F + +
Sbjct: 594 KDGNTTKAFAKFRCMLDQGV---LPDVQTHSVLIHGLSKNGKLQEAMGVFSELLD----- 645
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
K L ++ ++ + C +G K A E+ M + +P+ +++N LI+ LCK G +A+
Sbjct: 646 KGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAK 705
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A EL+ + +KG+ + TY ++ + + + F M G+ P+ VY L+
Sbjct: 706 ARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALID 765
Query: 238 KLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
+ G ++A S F MV++ ++ ++ GKL E ++V ++D+
Sbjct: 766 GCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDN 820
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 117/291 (40%), Gaps = 45/291 (15%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + + V YS ++ G R GD D L + K G++ D +Y +L+ G+
Sbjct: 261 KGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANK--GLLPDNYIYATLIDGF------ 312
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
C + E + D M P +A
Sbjct: 313 -------------------------------CRQKRSTEGKSMLDEMYTMGLKPDHVA-- 339
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + +G+ Q A +V +M + +T ++ LI LCK G L +AE+L+
Sbjct: 340 ---YTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFS 396
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM+ G+ PD TY L++ ++V ++ ++ L N + +V L G
Sbjct: 397 EMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCG 456
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L A F M+ LK + Y ++K L G+ +E ++I+G + D G
Sbjct: 457 DLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG 507
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 5/159 (3%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++ + + YC G+ ++ V M E C P+ ++++ +I LC+ G + EA EL M
Sbjct: 234 TYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSM 293
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ---V 242
++KG+ PD Y Y L+D R +G + +M GL+P+ Y L+ V+ +
Sbjct: 294 ANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDI 353
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
G + K ++ +K+K++ +Y ++ L G L++
Sbjct: 354 GGAFQVKE--EMFARKIKLNTFTYYALIHGLCKIGDLEK 390
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 88/228 (38%), Gaps = 51/228 (22%)
Query: 94 LCNNGKFDEALKLFDRMKNEHNPPKRLAVNL----------------GSFNVMADGYCGQ 137
LCN+G F A + +RM + NP ++ ++ F ++ D Y +
Sbjct: 117 LCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKK 176
Query: 138 GRFKDAIEVF--RKMGEY----RCS----------------------------PDTLSFN 163
G +A+ VF K E+ C PD ++
Sbjct: 177 GFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGAIVPDVYTYT 236
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
NLI+ C+ G + E + + +M +KG P+ TY +++ VD+ R M +
Sbjct: 237 NLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANK 296
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
GL P+ +Y L+ + E KS D M LK D +Y ++
Sbjct: 297 GLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALI 344
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 102/287 (35%), Gaps = 70/287 (24%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V YS ++ G+ + + F+LF +K L GV D VY +L+ G G
Sbjct: 716 KGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMK--LVGVPPDSFVYCALIDGCCKAGNT 773
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV- 122
E+A+ + V E + S A N+++D GK EA +L + M + H P +
Sbjct: 774 EKALSLFLGMVEEGIA---STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYT 830
Query: 123 -----------------------------NLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
N+ ++ + GY GR + +F +M
Sbjct: 831 ILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVAR 890
Query: 154 RCSPDTLS-----------------------------------FNNLIDQLCKNGMLAEA 178
PD L+ + LID LCK+ L+E
Sbjct: 891 GIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEV 950
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
++ E+ +G T G L+ R D+ MV S L
Sbjct: 951 LKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRSFL 997
>gi|222619024|gb|EEE55156.1| hypothetical protein OsJ_02962 [Oryza sativa Japonica Group]
Length = 428
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 159/364 (43%), Gaps = 30/364 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG--DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF 58
M GF Y+ L+ D D R+F + + D Y +++ G
Sbjct: 1 MRAAGFAPTTATYNVLVKAHCSDAAVPIDDAVRVFRNIPKP------DACSYNTVIDGLC 54
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+G EA + + E + ++ + V +++ L FD+ALKLFD M P
Sbjct: 55 RRGRLPEARDLFAEMIANGTAP--TVVTYTTLIHWLAREACFDDALKLFDEMARRGIMP- 111
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N+ +++ + DG C GR A+E+ +M + R P+T++++++ID LCK G L +A
Sbjct: 112 ----NVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQA 167
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN---LAVYNRL 235
E+ M +G PD +G L+ + R + + Y +M +G+RPN +++ R+
Sbjct: 168 MEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEMNFAGIRPNRLTWSLHGRI 227
Query: 236 ----VGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
V L G + A + M + + ++ +++ LS L++ +V +L
Sbjct: 228 NDAVVTALCSKGEVVRAFQVYQSMRTRGISTKPTTFHLLVECLSKKNNLEKAAHVVRDML 287
Query: 291 DDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAE------AAEAAK 344
+ I E V+ SK+ + V + E +K+ AK E A AK
Sbjct: 288 SERCIPERETWDTIVRAYWSKK-KLRAVGSVQEYNHEKKSTAKISSIEIHATGPCAAVAK 346
Query: 345 RSAR 348
AR
Sbjct: 347 VGAR 350
>gi|255661006|gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 376
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 122/277 (44%), Gaps = 41/277 (14%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFE---------------------------------E 35
D VVY+ ++ GF R G F L+E E
Sbjct: 24 DAVVYNAMLNGFYRAGRMKDCFELWEMMGREGSRSVASFNIMMRGLFDNRKVEEAMSIWE 83
Query: 36 LKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALC 95
L K G V D V YG L+ G+ G +++ + E + A A +++++ALC
Sbjct: 84 LMTK-SGFVEDSVTYGILVHGFCKNGYINKSLHILE--IAEQKGGVLDAFAYSAMINALC 140
Query: 96 NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
K ++A+ + + M P N +N + G G + DA+ +FR+MG C
Sbjct: 141 KESKLEKAVSVLNGMIRSGCKP-----NTHVYNALIKGLIGASKRDDAVRIFREMGTTDC 195
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
P+ +++ LID LCK EA +L EM +KG+NP TY LLM ++V+
Sbjct: 196 PPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQ 255
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+ ++ G +P++ ++N L+ L VG A S +
Sbjct: 256 LWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLY 292
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 130/278 (46%), Gaps = 10/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D V Y L+ GF ++G + + E + E+ GGV+ D Y +++ + E
Sbjct: 89 GFVEDSVTYGILVHGFCKNGYINKSLHILE-IAEQKGGVL-DAFAYSAMINALCKESKLE 146
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ N + S K + N+++ L K D+A+++F M PP N+
Sbjct: 147 KAVSVLNGMI--RSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTTDCPP-----NI 199
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++++ DG C RF +A ++ ++M E +P ++++ L+ LC + A +L+ +
Sbjct: 200 ATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQ 259
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
++ KG PD + +L+ V + + + M PNL N L+ + G
Sbjct: 260 VTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMEGFYKDGN 319
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ A + I+ +L+ D SY +K L ++ +
Sbjct: 320 VRNALVIWARILKNELQPDIISYNITLKGLCSCNRISD 357
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 14/280 (5%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
GD DG R+++++ E V D VVY +++ G++ G ++ E + E +G S S
Sbjct: 4 GDIDGAERVYKDIVE--SKVSPDAVVYNAMLNGFYRAGRMKDCFELW-EMMGREGS--RS 58
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ N ++ L +N K +EA+ +++ M + ++ ++ G+C G +
Sbjct: 59 VASFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSV-----TYGILVHGFCKNGYINKS 113
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+ + + D +++ +I+ LCK L +A + M G P+ + Y L+
Sbjct: 114 LHILEIAEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKG 173
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMD 262
++ DD FR+M + PN+A Y+ L+ L + EA M++K L
Sbjct: 174 LIGASKRDDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPS 233
Query: 263 DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+Y +MK L G K++ L++ + G F ++Q
Sbjct: 234 VITYSLLMKGLCLGHKVEMALQLWNQVTKKG---FKPDVQ 270
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 97/230 (42%), Gaps = 13/230 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VY+ L+ G + D R+F E+ + Y L+ G
Sbjct: 155 MIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTT--DCPPNIATYSILIDGLCKG 212
Query: 61 GMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
EA + E + G N SV + + ++ LC K + AL+L++++ + P
Sbjct: 213 ERFGEAYDLVKEMLEKGLNPSV----ITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKP- 267
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ N++ G C G+ + A+ ++ M + C+P+ ++ N L++ K+G + A
Sbjct: 268 ----DVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMEGFYKDGNVRNA 323
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
++ + + PD +Y + + NR+ D + V + P
Sbjct: 324 LVIWARILKNELQPDIISYNITLKGLCSCNRISDAIWFLHDAVRKKIIPT 373
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
YS L+ G + + L +E+ EK G+ + Y LMKG + E A++ +N
Sbjct: 201 TYSILIDGLCKGERFGEAYDLVKEMLEK--GLNPSVITYSLLMKGLCLGHKVEMALQLWN 258
Query: 72 EAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
+ G V+M +N ++ LC+ GK AL L+ M + P NL + N
Sbjct: 259 QVTKKGFKPDVQM----HNILIHGLCSVGKTQLALSLYLDMNRWNCAP-----NLVTQNT 309
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ +G+ G ++A+ ++ ++ + PD +S+N + LC +++A + K
Sbjct: 310 LMEGFYKDGNVRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAIWFLHDAVRKK 369
Query: 190 VNPDEYT 196
+ P + T
Sbjct: 370 IIPTKIT 376
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G A V++ + E + SPD + +N +++ + G + + EL+ M +G +
Sbjct: 1 CESGDIDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELWEMMGREG-SRSV 59
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
++ ++M F+ +V++ + + M SG + Y LV + G ++++ +I
Sbjct: 60 ASFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEI 119
Query: 255 MVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
+K + DA +Y M+ AL KL++ + ++ G++ G + +KG +
Sbjct: 120 AEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASK 179
Query: 314 REEEV 318
R++ V
Sbjct: 180 RDDAV 184
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFM 269
+D ++ +V+S + P+ VYN ++ + G + + +++M ++ AS+ M
Sbjct: 6 IDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELWEMMGREGSRSVASFNIM 65
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
M+ L D K++E + I + G +E S V G K G + + ++E E++
Sbjct: 66 MRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHG-FCKNGYINKSLHILEIAEQK 123
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 159/324 (49%), Gaps = 21/324 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G +PV Y+ L+ G +DG D L + ++E G + Y +++ G +
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM--GCNPNVESYNAVINGLSKENRFS 565
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + ++ V + + + + +++D LC NG+ A K+F M+ P NL
Sbjct: 566 EAEKICDKMVEQ--GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP-----NL 618
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + G C +G+ +A +M E C P +++ L+ LC+ G EAE+L +
Sbjct: 619 YTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKD 674
Query: 185 MSDKGVNPD-EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M ++G PD E Y LL+ C + VD F + G + +L++Y L+ L + G
Sbjct: 675 MKERGFCPDREIYYSLLIAHCKNL-EVDHALKIFHSIEAKGFQLHLSIYRALICALCKAG 733
Query: 244 MLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++EA++ FD M+ K+ D+ + ++ L G+LD ++++ I++ F+ +Q
Sbjct: 734 QVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLL-HIMESKN--FTPNIQ 790
Query: 303 EFVK--GELSKEGREEEVVKLMEK 324
+V ELS+ G+ E L +K
Sbjct: 791 TYVILGRELSRIGKSIESEPLADK 814
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 127/264 (48%), Gaps = 9/264 (3%)
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
M E A Y + + NS ++ S + N++++ L GK EA + ++ P
Sbjct: 178 MVEGARNLYKQML--NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSP---- 231
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ ++ + G+C A VF +M + C P++++++ LI+ LC G + EA ++
Sbjct: 232 -DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDM 290
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
EM +KG+ P YTY L + A + ++ +M G RPN+ Y L+ L +
Sbjct: 291 LEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR 350
Query: 242 VGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+G L+ A + M+K+ L + +Y ++ L GG+ L+I + G + ++
Sbjct: 351 LGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQT 410
Query: 301 LQEFVKGELSKEGREEEVVKLMEK 324
E +KG L G E+ + L EK
Sbjct: 411 YNEIIKG-LCLGGDIEKAMVLFEK 433
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 128/277 (46%), Gaps = 12/277 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEE-LKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+G + Y+ L+ G R G + L+ + LKE G+V + V Y +L+ + G
Sbjct: 332 RGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE---GLVPNTVTYNALINELCVGGR 388
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
A++ ++ G S N ++ LC G ++A+ LF++M P
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTY--NEIIKGLCLGGDIEKAMVLFEKMLKMGPLP----- 441
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ ++N + +GY +G +A + M E C PD ++N L+ K G L A +
Sbjct: 442 TVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYF 501
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM + G+NP+ +Y L+D + +VD + ++M + G PN+ YN ++ L +
Sbjct: 502 QEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKE 561
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
EA+ D MV++ L + +Y ++ L G+
Sbjct: 562 NRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGR 598
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 148/359 (41%), Gaps = 44/359 (12%)
Query: 8 ADP--VVYSYLMLGFVRDGDSDGVFRLFEELKE--------------------------- 38
DP V YS L+ G +G D + EE+ E
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 323
Query: 39 ------KLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLD 92
K G + Y +L+ G G E A+ Y++ + E + + V N++++
Sbjct: 324 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE--GLVPNTVTYNALIN 381
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
LC G+F ALK+F M+ + N ++N + G C G + A+ +F KM +
Sbjct: 382 ELCVGGRFSTALKIFHWMEGHGS-----LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 436
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
P +++N LI+ G + A L M + G PDE+TY L+ + +++
Sbjct: 437 MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 496
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
+ YF++MV+ GL PN Y L+ + G +D A S M + + SY ++
Sbjct: 497 ASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVIN 556
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKA 330
LS + E +I +++ G + + G L + GR + K+ E+ K
Sbjct: 557 GLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDG-LCRNGRTQFAFKIFHDMEKRKC 614
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 152/331 (45%), Gaps = 19/331 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+F D Y+ L+LG R+ + D F +F+ + ++ G + V Y +L+ G +
Sbjct: 224 IFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE--GCDPNSVTYSTLINGLCNE 281
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA++ E + ++ + + ALC +EA++L RMK P
Sbjct: 282 GRVDEALDMLEEMI--EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRP--- 336
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + G G+ + AI ++ KM + P+T+++N LI++LC G + A +
Sbjct: 337 --NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALK 394
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M G + TY ++ ++ F KM+ G P + YN L+ +
Sbjct: 395 IFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYL 454
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE----ILEIVGGILDDGGI 295
G ++ A D+M + + D+ +Y ++ S GKL+ E+V L+ +
Sbjct: 455 TKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 514
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
++ + G SK+G+ + + L+++ E
Sbjct: 515 SYT----ALIDGH-SKDGKVDIALSLLKRME 540
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 14/284 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G +A+ Y+ ++ G GD + LFE++ + G + V Y +L+ GY KG
Sbjct: 402 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM--GPLPTVVTYNTLINGYLTKGNV 459
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAV 122
A + + + + + N ++ GK + A F M + NP
Sbjct: 460 NNAARLLD--LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP------ 511
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N S+ + DG+ G+ A+ + ++M E C+P+ S+N +I+ L K +EAE++
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 571
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M ++G+ P+ TY L+D R F M PNL Y+ L+ L Q
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
G DEA+ +I + +D +Y ++ L G+ E ++V
Sbjct: 632 GKADEAERMSEIGCEP-TLD--TYSTLVSGLCRKGRFYEAEQLV 672
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+S G Y+ L+ + V+ +++M++SG++P+L +N L+ L + G
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD----DGGIEFSE 299
+ EA+ I+ + + D + F +L G + L++ G+ D +G S
Sbjct: 213 KVREAEL---ILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+ G L EGR +E + ++E+
Sbjct: 270 TYSTLING-LCNEGRVDEALDMLEE 293
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 152/329 (46%), Gaps = 11/329 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V Y+ ++LG R G+ D +F ++ + G+ + + Y LM GYF
Sbjct: 479 MLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLD--CGLKPNVITYSILMDGYFKN 536
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A ++ V EN + S N ++ LC G+ EA + + + P L
Sbjct: 537 GDTEYAFYVFDRMVDEN--IVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCL 594
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + DG+ +G A+ +R+M E SP+ +++ LI+ CKN A +
Sbjct: 595 -----TYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALK 649
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EM +KG+ D YG L+D + ++ + F +++D GL PN +YN L+
Sbjct: 650 MRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYR 709
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ ++ A + M+ + + D +Y ++ L G+L L++ + G I
Sbjct: 710 NLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDII 769
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKERE 328
+ G L +G+ E K++ + ER+
Sbjct: 770 IYTVLING-LCGKGQLENAQKILAEMERD 797
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 155/352 (44%), Gaps = 16/352 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGFV + Y+ +M GF+++G + E+ E GV + + Y +L+ G+
Sbjct: 587 KGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCE--SGVSPNVITYTTLINGFCKNNNT 644
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A++ NE N +++ A +++D C + A LF + + P +
Sbjct: 645 DLALKMRNEM--RNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVI-- 700
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+N + GY + A+ + ++M S D ++ LID L K G L A +LY
Sbjct: 701 ---YNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYS 757
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EMS KG+ PD Y +L++ ++++ +M + PN+ +YN L+ + G
Sbjct: 758 EMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAG 817
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG----IEFS 298
L EA + M+ K L +D +Y ++ GG + ++ DG I
Sbjct: 818 NLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGN-SALKSLLSLKFKDGKGMKRINEQ 876
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAKRSARAA 350
+ +++ ++ ++K R E K++EK+E + A R R A
Sbjct: 877 DSIKKVIEKAVNKYLR-PEAQKMIEKEEAIQDHRPLEHFHTLSTATRWWRIA 927
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 33/284 (11%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG+V ++ ++ V+ G+ RL +E+ GV + VV +L+KGY +
Sbjct: 308 KGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVS--CGVQMNVVVATTLVKGYCKQDKL 365
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A+E +++ + EN + V +++ C NG +A L+ +MKN++ P VN
Sbjct: 366 VSALEFFDK-MNENGPSP-NRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVN 423
Query: 124 -----------------------------LGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
+ ++N + C +G+ +A +++KM +
Sbjct: 424 SLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKG 483
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
+P +S+N++I C+ G L A ++ +M D G+ P+ TY +LMD F+ +
Sbjct: 484 LAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAF 543
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
F +MVD + P+ YN + L +VG EA+ V+K
Sbjct: 544 YVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEK 587
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 7/257 (2%)
Query: 37 KEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCN 96
K L GV D +M+ EEEA + + EA ++ VK+ A A + V+ A C
Sbjct: 234 KMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEA--KSRGVKLDAAAYSIVIQAFCK 291
Query: 97 NGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
N + A L M+++ P G+F + QG +A+ + +M
Sbjct: 292 NLDVELACGLLKDMRDKGWVPSE-----GTFTSVIGACVKQGNMVEALRLKDEMVSCGVQ 346
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
+ + L+ CK L A E + +M++ G +P+ TY +L++ C + +
Sbjct: 347 MNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDL 406
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG 276
+ +M + + P + + N L+ ++V +EA FD V + +Y ++ L
Sbjct: 407 YTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKE 466
Query: 277 GKLDEILEIVGGILDDG 293
GK+ E + +LD G
Sbjct: 467 GKMSEATTLWQKMLDKG 483
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + + Y + DAI F ++ E P N L+ L KN M+ EA E+Y +M
Sbjct: 177 YNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMV 236
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
KGV+ D +T ++M A + N ++ +F + G++ + A Y+ ++
Sbjct: 237 LKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVI 286
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 138/307 (44%), Gaps = 40/307 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G ++ S ++LF+E+ + G+ D V Y +L++G G
Sbjct: 324 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASR--GLALDTVCYTALIRGLLQTGKIP 381
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A Y + V ++++D L G+ A+++F M+ + LA N
Sbjct: 382 QASSVYKTMTSHGCVPDV--VTLSTMIDGLSKAGRIGAAVRIFKSME-----ARGLAPNE 434
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G C + A+E+ +M + C+PDT+++N LID LCK+G + A + E
Sbjct: 435 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 494
Query: 185 MSDKGVNPDEYTYGLLM------------------------------DACFEVNRVDDGA 214
M + G PD YTY +L+ D + +++ G
Sbjct: 495 MLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGC 554
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALS 274
F +M SG+ N RL+ L + +DEA S F+ + K+ +Y ++ AL
Sbjct: 555 MLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALI 613
Query: 275 DGGKLDE 281
GK++E
Sbjct: 614 KSGKVNE 620
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 124/277 (44%), Gaps = 11/277 (3%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
++ ++ G + G FE ++ + + L+ G GM +A
Sbjct: 192 THNLVLHGLCKSGKVLAAMDHFEAVRRSMP---VSAATFSILINGLVKAGMMIQAHSLAQ 248
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E ++ + ++++ L N K EA+ L +++ P + ++N +
Sbjct: 249 ETTTNGCTIDIHTY--TAIVNWLAKNKKIQEAVALMEKITANGCTP-----TIATYNALL 301
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
+G C GR ++AI++ RK+ + C+PD +++ +LID L K EA +L+ EM+ +G+
Sbjct: 302 NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLA 361
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
D Y L+ + ++ ++ ++ M G P++ + ++ L + G + A
Sbjct: 362 LDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 421
Query: 252 FDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
F M + L ++ Y ++ L K+D LE++
Sbjct: 422 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 458
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 16/295 (5%)
Query: 36 LKEKL--GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDA 93
L EK+ G Y +L+ G G EEA++ + V ++ V S++D
Sbjct: 281 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV--DNGCTPDVVTYTSLIDG 338
Query: 94 LCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
L + EA KLF M + + LA++ + + G G+ A V++ M +
Sbjct: 339 LGKEKRSFEAYKLFKEMAS-----RGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSH 393
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
C PD ++ + +ID L K G + A ++ M +G+ P+E Y L+ + ++D
Sbjct: 394 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 453
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKA 272
+M + P+ YN L+ L + G ++ A++FFD M++ K D +Y ++
Sbjct: 454 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 513
Query: 273 LSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
L G D G+LDD + S + + L K G+ E L + ER
Sbjct: 514 LCKAGNTDA----ACGVLDD--MSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMER 562
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 132/293 (45%), Gaps = 10/293 (3%)
Query: 36 LKEKLGGVVSDGV-VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL 94
LK +L + V + L+ GY + EEA E + E+ V S +N VL L
Sbjct: 142 LKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIRE-MEEDFGVAPSLKTHNLVLHGL 200
Query: 95 CNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
C +GK A+ F+ ++ + + V+ +F+++ +G G A + ++
Sbjct: 201 CKSGKVLAAMDHFEAVR------RSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNG 254
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C+ D ++ +++ L KN + EA L +++ G P TY L++ ++ R+++
Sbjct: 255 CTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 314
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
RK+VD+G P++ Y L+ L + EA F M + L +D Y +++ L
Sbjct: 315 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 374
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
GK+ + + + G + L + G LSK GR V++ + E
Sbjct: 375 LQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG-LSKAGRIGAAVRIFKSME 426
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 31/234 (13%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y+ L+ G + GD + F+E+ E G D Y L+ G G + A
Sbjct: 468 DTITYNILIDGLCKSGDVEAARAFFDEMLE--AGCKPDVYTYNILISGLCKAGNTDAA-- 523
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE----HNPPKRLAVNL 124
G + S +S++D LC +GK + LF M+ RL +L
Sbjct: 524 -----CGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHL 578
Query: 125 GSFNVMADGYCGQGRFKDAIEVF---RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
C R +A+ +F RK G P ++N++I L K+G + E + +
Sbjct: 579 ----------CKANRVDEAVSLFNAIRKEG----MPHPYAYNSIISALIKSGKVNEGQAV 624
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
Y EM+ + PD TY L++ NR+D Y+ +M G P +++ ++L
Sbjct: 625 YQEMT-RWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKL 677
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 146/310 (47%), Gaps = 21/310 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ L+ G RL ++ +K + + + Y +L+ + G
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK--KITPNVITYSALLDAFVKNGKV 276
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E + E V S+ V +S+++ LC + + DEA ++FD M + K +
Sbjct: 277 LEAKELFEEMV--RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS-----KGCLAD 329
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S+N + +G+C R +D +++FR+M + +T+++N LI + G + +A+E +
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M G++PD +TY +L+ + ++ F M + ++ Y ++ + + G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI-----------LD 291
++EA S F + +K LK D +Y MM L G L E+ + + L
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Query: 292 DGGIEFSEEL 301
DG I S EL
Sbjct: 510 DGDITLSAEL 519
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 10/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G+ D V L+ GF R L +++ E G D V Y +++
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI--GYKPDIVAYNAIIDSLCKT 203
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A + + E E ++ + V ++++ LCN+ ++ +A +L M + P
Sbjct: 204 KRVNDAFDFFKEI--ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP--- 258
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +++ + D + G+ +A E+F +M PD +++++LI+ LC + + EA +
Sbjct: 259 --NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M KG D +Y L++ + RV+DG FR+M GL N YN L+
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 241 QVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
Q G +D+A+ FF M + D +Y ++ L D G+L++ L I
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 138/278 (49%), Gaps = 10/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D V Y+ ++ + + F F+E++ K G+ + V Y +L+ G
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK--GIRPNVVTYTALVNGLCNSSRWS 242
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A ++ + + + + + +++LDA NGK EA +LF+ M P ++
Sbjct: 243 DAARLLSDMIKKK--ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP-----DI 295
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + +G C R +A ++F M C D +S+N LI+ CK + + +L+ E
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS +G+ + TY L+ F+ VD +F +M G+ P++ YN L+G L G
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
L++A F+ M K+ + +D +Y +++ + GK++E
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 10/206 (4%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV--NLGSFNVMADGYCGQGRF 140
S V N +L A+ K+D + L +M+ L + +L +FN++ + +C +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKME-------VLGIRNDLYTFNIVINCFCCCFQV 136
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
A+ + KM + PD ++ +L++ C+ +++A L +M + G PD Y +
Sbjct: 137 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 196
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML-DEAKSFFDIMVKKL 259
+D+ + RV+D +F+++ G+RPN+ Y LV L D A+ D++ KK+
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 260 KMDDASYKFMMKALSDGGKLDEILEI 285
+ +Y ++ A GK+ E E+
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKEL 282
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 42/225 (18%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ DAI++F M + R P + FN L+ + K L +M G+ D YT+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 199 LLMD---ACFEV--------------------------------NRVDDGATYFRKMVDS 223
++++ CF+V NRV D + KMV+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
G +P++ YN ++ L + +++A FF +I K ++ + +Y ++ L + + +
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 283 LEIVGGI----LDDGGIEFSEELQEFVKGELSKEGRE--EEVVKL 321
++ + + I +S L FVK E +E EE+V++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 147/348 (42%), Gaps = 36/348 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V++ L+ + R G D +FE+++ K G++ D V + +++
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK--GMIPDTVTFATVISSLCRI 470
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-- 118
G ++A+ +N V + V S ++ CN+G+ +A +L M N+ PP
Sbjct: 471 GRLDDALHKFNHMV--DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 528
Query: 119 --------------RLA---------------VNLGSFNVMADGYCGQGRFKDAIEVFRK 149
R+A N+ +FN + +GYC G ++A +
Sbjct: 529 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 588
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M P+ + L+D CKNG + +A ++ +M KGV P Y +++ F+ R
Sbjct: 589 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 648
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKF 268
F +M++SG ++ Y ++G L + DEA + + +K D ++
Sbjct: 649 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 708
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
++ A+ G+ E E+ I G + + + + +E EE
Sbjct: 709 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 756
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 13/261 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS ++ G + D R+ E++ E G + + Y SL+ GY +
Sbjct: 271 MVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE--AGTRPNSITYNSLIHGYSIS 328
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVAN-NSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
GM E++ + + +S + V N NS + AL +G+ +EA +FD M + P
Sbjct: 329 GMWNESVRVFKQM---SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKP-- 383
Query: 120 LAVNLGSFNVMADGYCG--QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
++ S++ M GY D +F M +P+ FN LI+ + GM+ +
Sbjct: 384 ---DIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDK 440
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A ++ +M +KG+ PD T+ ++ + + R+DD F MVD G+ P+ AVY L+
Sbjct: 441 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQ 500
Query: 238 KLVQVGMLDEAKSFFDIMVKK 258
G L +AK M+ K
Sbjct: 501 GCCNHGELVKAKELISEMMNK 521
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 141/294 (47%), Gaps = 31/294 (10%)
Query: 13 YSY-LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF-MKGMEEEAMECY 70
+SY L+ GFV+DG+ D LF E+ E+ GV+ ++ S++K MK M++
Sbjct: 212 FSYSLIYGFVKDGEVDKAHCLFLEMMEQ--GVLPKILICNSIIKELCKMKEMDKA----- 264
Query: 71 NEAVGE---NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E++ + +S + + ++D LC + D+A ++ ++M P + ++
Sbjct: 265 -ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSI-----TY 318
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + GY G + +++ VF++M P + N+ I L K+G EA+ ++ M
Sbjct: 319 NSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVL 378
Query: 188 KGVNPDEYTYGLLM-------DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
KG PD +Y ++ D+C D F M+ G+ PN V+N L+
Sbjct: 379 KGPKPDIISYSTMLHGYATATDSCLA-----DVHNIFNLMLTKGIAPNKHVFNILINAYA 433
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ GM+D+A F D+ K + D ++ ++ +L G+LD+ L ++D G
Sbjct: 434 RCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 487
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 149/395 (37%), Gaps = 84/395 (21%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + D V ++ ++ R G D F + + GV VYG L++G G
Sbjct: 451 KGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI--GVPPSEAVYGCLIQGCCNHGEL 508
Query: 64 EEAMECYNEAVGEN---------SSV-------------------------KMSAVANNS 89
+A E +E + ++ SS+ + + V NS
Sbjct: 509 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 568
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+++ C G +EA L D M + P N + + DGYC GR DA+ VFR
Sbjct: 569 LMEGYCLVGNMEEAFALLDAMASIGIEP-----NCYIYGTLVDGYCKNGRIDDALTVFRD 623
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG----------- 198
M P ++ ++ ++ L + A++++ EM + G +TYG
Sbjct: 624 MLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNC 683
Query: 199 ------------------------LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+++ A F+V R + F + GL PN+ Y+
Sbjct: 684 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSM 743
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS-YKFMMKAL---SDGGKLDEILEIVGGIL 290
++ L++ +EA + F + K D+ +++ L ++ K L I+G
Sbjct: 744 MITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIG--- 800
Query: 291 DDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKK 325
+ + + S+EG+ E +KL+ K
Sbjct: 801 -ENNLTLEASTISLLASLFSREGKYREHIKLLPAK 834
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 7/187 (3%)
Query: 143 AIEVFRKMGEYRC---SPDTL-SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
AIE+F++M + C SP T+ ++N LID + + G + G+ PD+++Y
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
L+ + VD F +M++ G+ P + + N ++ +L ++ +D+A+S MV
Sbjct: 216 LIY-GFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274
Query: 259 -LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+ D +Y ++ L +D+ ++ +++ G S + G S G E
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG-YSISGMWNE 333
Query: 318 VVKLMEK 324
V++ ++
Sbjct: 334 SVRVFKQ 340
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 143/289 (49%), Gaps = 13/289 (4%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
A P Y+Y +++G+ G + ++L ++LKE+ G + V + S++ K +E
Sbjct: 318 AVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKER--GCIPSVVSFNSILTCLGKKRKVDE 375
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A+ + EA+ +++ S N ++D LC GK +EA + D M++ P NL
Sbjct: 376 ALTLF-EAMKKDAEPNSSTY--NIIIDMLCMAGKVEEAYMIRDEMEHAGLFP-----NLL 427
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+ N+M D C +F+ A E+F + C+P+++++ +LID L K G + +A L+ M
Sbjct: 428 TVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENM 487
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
D G N + Y L+ F R +DG F++M G +P+L + N + + + G +
Sbjct: 488 LDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDV 547
Query: 246 DEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++ ++ F DI D SY ++ L+ G+ E I + G
Sbjct: 548 EKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQG 596
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 143/281 (50%), Gaps = 10/281 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + V Y L+ G + G+ D +RLFE + + G ++ VVY SL++ +FM G +
Sbjct: 455 RGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDT--GHNANPVVYTSLIRNFFMHGRK 512
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+ + + E ++ + N+ +D + G ++ +F+ +K P +
Sbjct: 513 EDGHKIFKEMNRRGCQPDLTLL--NTYMDCVFKAGDVEKGRAIFEDIKGYGFLP-----D 565
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S++++ G G+ ++ +F M + + D ++N ++D CK+G L +A E+
Sbjct: 566 VRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLE 625
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM K V P TYG ++D +++R+D+ F + G+ N+ VY+ L+ +VG
Sbjct: 626 EMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVG 685
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
+DEA + M+KK L + ++ +M AL +++E L
Sbjct: 686 RIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEAL 726
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 122/249 (48%), Gaps = 9/249 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF+ D YS L+ G + G + +F +K++ G D Y +++ G+ G +
Sbjct: 561 GFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQ--GFALDARAYNAVVDGFCKSGKLD 618
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E E + V + S++D L + DEA LF+ K+ K + +N+
Sbjct: 619 KAYEVLEEM--KVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKS-----KGIELNV 671
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + DG+ GR +A + +M + +P+ ++N+L+D L K + EA +
Sbjct: 672 IVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQS 731
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + +P+ YTY +L++ V + + ++++M GL PN+ Y ++ L +VG
Sbjct: 732 MKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGN 791
Query: 245 LDEAKSFFD 253
+ +A S F+
Sbjct: 792 ITDACSLFE 800
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 129/291 (44%), Gaps = 43/291 (14%)
Query: 3 VKGFVADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
VKG +P V+Y+ + F + G+ D ++ F ELK + G+ D V Y S++
Sbjct: 243 VKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQ--GLKPDDVSYTSMIWVLCKA 300
Query: 61 G-----------ME-EEAMEC---YNEAV-GENSSVKM-----------------SAVAN 87
G ME E A+ C YN + G S+ + S V+
Sbjct: 301 GRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSF 360
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
NS+L L K DEAL LF+ MK + P N ++N++ D C G+ ++A +
Sbjct: 361 NSILTCLGKKRKVDEALTLFEAMKKDAEP------NSSTYNIIIDMLCMAGKVEEAYMIR 414
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M P+ L+ N ++D+LCK A E++ S +G NP+ TY L+D +
Sbjct: 415 DEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKK 474
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
VDD F M+D+G N VY L+ G ++ F M ++
Sbjct: 475 GNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRR 525
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 119/250 (47%), Gaps = 9/250 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF D Y+ ++ GF + G D + + EE+K K V YGS++ G
Sbjct: 595 QGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVK--RVPPTVATYGSIIDGLAKIDRL 652
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + EA ++ ++++ + +S++D G+ DEA + + M K L N
Sbjct: 653 DEAYMLFEEA--KSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMK-----KGLTPN 705
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + D +A+ F+ M E +CSP+T +++ LI+ LC+ +A +
Sbjct: 706 VYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 765
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +G+ P+ TY ++ +V + D + F + +G P+ A +N L+ +
Sbjct: 766 EMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHAN 825
Query: 244 MLDEAKSFFD 253
EA F+
Sbjct: 826 RAIEAYHVFE 835
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 5/194 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ AL G+ + AL L D +K P ++ +NV D + G A + F
Sbjct: 221 TTLVRALAREGRVEGALALVDEVKGSCLEP-----DIVLYNVCIDCFGKAGNVDMAWKFF 275
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
++ PD +S+ ++I LCK G L+EAEEL+G+M + P Y Y ++
Sbjct: 276 HELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSA 335
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
+ ++ ++ + G P++ +N ++ L + +DEA + F+ M K + + ++Y
Sbjct: 336 GQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYN 395
Query: 268 FMMKALSDGGKLDE 281
++ L GK++E
Sbjct: 396 IIIDMLCMAGKVEE 409
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 11/241 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V +Y ++ G + D + LFEE K K G+ + +VY SL+ G+ G +EA
Sbjct: 634 PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSK--GIELNVIVYSSLIDGFGKVGRIDEAY 691
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E + + + NS++DAL + +EAL F MK P N ++
Sbjct: 692 LILEEMM--KKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSP-----NTYTY 744
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+++ +G C ++ A +++M + P+ +++ +I L K G + +A L+
Sbjct: 745 SILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKA 804
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G PD ++ L++ NR + F + G R N+ L+ L + L++
Sbjct: 805 NGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQ 864
Query: 248 A 248
A
Sbjct: 865 A 865
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + +VYS L+ GF + G D + + EE+ +K G+ + + SLM
Sbjct: 665 KGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKK--GLTPNVYTWNSLMDALVKAEEI 722
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA+ C+ + + + +++ LC K+++A + M+ + P N
Sbjct: 723 NEALICFQSM--KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVP-----N 775
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ M G G DA +F + +PD SFN LI+ + EA ++
Sbjct: 776 VVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFE 835
Query: 184 EMSDKGVNPDEYTYGLLMDA 203
E KG + L+DA
Sbjct: 836 ETRLKGCRINVKACISLLDA 855
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 106/261 (40%), Gaps = 10/261 (3%)
Query: 72 EAVGENSSVKMSAVANNSVLD---ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
E V E SV V N + D AL + D+A ++ M+ P ++
Sbjct: 132 EKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPA-----FSAYT 186
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
V+ + + A+E+ R+M E F L+ L + G + A L E+
Sbjct: 187 VLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGS 246
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+ PD Y + +D + VD +F ++ GL+P+ Y ++ L + G L EA
Sbjct: 247 CLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEA 306
Query: 249 KSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+ F M + + A +Y M+ G+ + +++ + + G I +
Sbjct: 307 EELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTC 366
Query: 308 ELSKEGREEEVVKLMEKKERE 328
L K+ + +E + L E +++
Sbjct: 367 -LGKKRKVDEALTLFEAMKKD 386
>gi|56201849|dbj|BAD73299.1| fertility restorer B-like [Oryza sativa Japonica Group]
gi|56202086|dbj|BAD73615.1| fertility restorer B-like [Oryza sativa Japonica Group]
Length = 647
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 144/322 (44%), Gaps = 23/322 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG--DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF 58
M GF Y+ L+ D D R+F + + D Y +++ G
Sbjct: 263 MRAAGFAPTTATYNVLVKAHCSDAAVPIDDAVRVFRNIPKP------DACSYNTVIDGLC 316
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+G EA + + E + ++ + V +++ L FD+ALKLFD M P
Sbjct: 317 RRGRLPEARDLFAEMIANGTAP--TVVTYTTLIHWLAREACFDDALKLFDEMARRGIMP- 373
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
N+ +++ + DG C GR A+E+ +M + R P+T++++++ID LCK G L +A
Sbjct: 374 ----NVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQA 429
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN---LAVYNRL 235
E+ M +G PD +G L+ + R + + Y +M +G+RPN +++ R+
Sbjct: 430 MEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEMNFAGIRPNRLTWSLHGRI 489
Query: 236 ----VGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
V L G + A + M + + ++ +++ LS L++ +V +L
Sbjct: 490 NDAVVTALCSKGEVVRAFQVYQSMRTRGISTKPTTFHLLVECLSKKNNLEKAAHVVRDML 549
Query: 291 DDGGIEFSEELQEFVKGELSKE 312
+ I E V+ SK+
Sbjct: 550 SERCIPERETWDTIVRAYWSKK 571
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
Query: 104 LKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFN 163
L+ F M+ P N+ ++N M DGYC R +A R MG P+ ++FN
Sbjct: 3 LRFFKEMERNGCLP-----NVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFN 57
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
+I+ LC++G L E E+ EMS KG PDE TY L++ + +MV +
Sbjct: 58 MIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRN 117
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEI 282
GL PN+ Y L+ + + G L+ A FFD M V+ L ++ +Y ++ + G LDE
Sbjct: 118 GLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEA 177
Query: 283 LEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
++ + G I + G GR EE + L++
Sbjct: 178 YRVLNEMTRSGFIPSIVTYNALINGHCVL-GRMEEAIGLLQ 217
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 129/287 (44%), Gaps = 25/287 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G + Y+ ++ GF + G D +R+ E+ G + V Y +L+ G+ +
Sbjct: 149 MHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTR--SGFIPSIVTYNALINGHCVL 206
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA+ + VG+ V V+ ++++ N + D A ++ M + P +
Sbjct: 207 GRMEEAIGLLQDMVGK--GVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAV 264
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ + G C Q R +A ++F++M + PD ++ LI+ CK G L +A
Sbjct: 265 -----TYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALH 319
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM KG PD TY +L++ + R + K+ P+ YN L+
Sbjct: 320 LHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCC 379
Query: 241 QV---------------GMLDEAKSFFDIMV-KKLKMDDASYKFMMK 271
+ G++DEA F+ M+ K K ++A Y ++
Sbjct: 380 NIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIH 426
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 142/326 (43%), Gaps = 35/326 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG + + ++ ++ G RDG + E+ K G V D V Y +L+ GY +
Sbjct: 44 MGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRK--GYVPDEVTYNTLVNGYCKE 101
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR- 119
G +A+ + E V + + + V S+++++C G + A++ FD+M P
Sbjct: 102 GNFHQALVLHAEMV--RNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNER 159
Query: 120 -----------------------------LAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
++ ++N + +G+C GR ++AI + + M
Sbjct: 160 TYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDM 219
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
PD +S++ +I +N L A ++ EM K V PD TY L+ E R+
Sbjct: 220 VGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRL 279
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFM 269
+ F++M+ L P+ Y L+ + G L++A D M++K + DA +Y +
Sbjct: 280 TEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVL 339
Query: 270 MKALSDGGKLDEILEIVGGILDDGGI 295
+ L+ + E ++ + D I
Sbjct: 340 INGLNKQARSKEARRLLLKLFYDDSI 365
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 12/232 (5%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+ V N+++D C + DEA M K L NL +FN++ +G C GR K+
Sbjct: 17 NVVTYNTMIDGYCKLKRTDEAFGFLRSMG-----LKGLEPNLITFNMIINGLCRDGRLKE 71
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
EV +M PD +++N L++ CK G +A L+ EM G++P+ TY L++
Sbjct: 72 TSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLIN 131
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+ + ++ +F +M GL PN Y ++ Q G+LDEA + M +
Sbjct: 132 SMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIP 191
Query: 262 DDASYKFMMKALSDGGKLDEIL----EIVG-GILDDGGIEFSEELQEFVKGE 308
+Y ++ G+++E + ++VG G+L D + +S + F + +
Sbjct: 192 SIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPD-VVSYSTIISGFARNQ 242
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 29/313 (9%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + D V YS ++ GF R+ + D F++ E+ K V+ D V Y SL++G +
Sbjct: 219 MVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGK--SVLPDAVTYSSLIQGLCEQ 276
Query: 61 GMEEEAMECYNEAVGENSSVKMSA--VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
EA + + E + ++K+ ++++A C G ++AL L D M + P
Sbjct: 277 RRLTEACDMFQEML----TIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPD 332
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ---------- 168
+ ++NV+ +G Q R K+A + K+ P +++N LI+
Sbjct: 333 AV-----TYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAV 387
Query: 169 -----LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
C G++ EA++++ M +K P+E Y +++ + V +++MV
Sbjct: 388 ALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHV 447
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASY-KFMMKALSDGGKLDEI 282
P+ LV L GM E +++ K+ DA K +++ G +D +
Sbjct: 448 DFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMV 507
Query: 283 LEIVGGILDDGGI 295
++ + DG I
Sbjct: 508 FNLLTEMAKDGLI 520
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG Y+ L+ + +D + +E++EK G+ D + Y L+ GY
Sbjct: 352 MLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK--GISPDAITYNILINGYCRC 409
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A ++E + S +K + S+L L + EA LF ++ +E P +
Sbjct: 410 ANAKKAFLLHDEMLA--SGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAI 467
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
FN + DG+C K A E+ + M + PD ++FN ++ C+ G + EA E
Sbjct: 468 M-----FNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM +G+ PD ++ L+ + D +M+D+G P + YN LV L
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ D A+ MV K + DD +Y +++ ++ DE
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 10/261 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+V+ YL+ +D F F +KEK GV+ SL+ + E A Y
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEK--GVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E +K S N +++ LC GK +A M+ P N+ ++N +
Sbjct: 210 AEMF--RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKP-----NIVTYNTI 262
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
GYC GR + A + M + PD+ ++ +LI +CK G L EA +++ EM KG+
Sbjct: 263 VHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGL 322
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P Y L+D +D + Y +M+ G+ P ++ YN L+ L DEA+
Sbjct: 323 RPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAEC 382
Query: 251 FF-DIMVKKLKMDDASYKFMM 270
+I K + D +Y ++
Sbjct: 383 MIKEIQEKGISPDAITYNILI 403
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 113/247 (45%), Gaps = 9/247 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D + Y+ L+ G+ R ++ F L +E+ G+ Y SL+ K
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLA--SGIKPTKKTYTSLLHVLSKKNRM 447
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + + + E V A+ N+++D C+N A +L M PP +
Sbjct: 448 KEADDLFKKITSEG--VLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEV--- 502
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+FN + G+C +G+ ++A E+F +M PD +SFN LI + G + +A +
Sbjct: 503 --TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRN 560
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM D G NP TY L+ + D ++MV G+ P+ Y L+ + +V
Sbjct: 561 EMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620
Query: 244 MLDEAKS 250
+ DE K+
Sbjct: 621 IPDENKN 627
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 124/262 (47%), Gaps = 13/262 (4%)
Query: 24 GDSDGVFRLFEEL---KEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSV 80
G ++ + +FE L +++LG +V+ L+K +EA EC+ + V
Sbjct: 127 GTTNSIREIFEFLAASRDRLG--FKSSIVFDYLIKSCCDMNRADEAFECF--YTMKEKGV 182
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRF 140
+ NS+L + + A L+ M R+ ++ +FN+M + C +G+
Sbjct: 183 LPTIETCNSLLSLFLKLNRTEAAWVLYAEMFR-----LRIKSSVYTFNIMINVLCKEGKL 237
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
K A + M P+ +++N ++ C +G + A+ + M + + PD +TYG L
Sbjct: 238 KKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSL 297
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-L 259
+ + R+++ + F +MV GLRP+ +YN L+ G LD A ++ D M+KK +
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Query: 260 KMDDASYKFMMKALSDGGKLDE 281
++Y ++ AL + DE
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDE 379
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 146/340 (42%), Gaps = 23/340 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + V Y+ L+ GF G L E+K L + D + L+ +
Sbjct: 235 MNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMK--LKNINPDVYTFSILIDALGKE 292
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A AV + VK V NS++D + A +F+ M P
Sbjct: 293 GKMKAAKIVL--AVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTP--- 347
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ S+ +M DG C +AI +F +M P+T++FN+LID LCK+G +A +
Sbjct: 348 --GVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWD 405
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M D+ D TY L+DA + +D F+KM+ ++P++ Y L+ L
Sbjct: 406 LVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLC 465
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G L A+ F +++K +D +Y M+ G DE L ++ + D+G I +
Sbjct: 466 KGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAI 525
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+ L EK E +KAE RE A
Sbjct: 526 TFDII-------------ICALFEKDENDKAEKLLREMIA 552
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 150/329 (45%), Gaps = 12/329 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG +D V + L+ F G F + + ++ G D + +L+KG ++G
Sbjct: 98 KGITSDLVTLNILINCFCHLGQITLSFSVLATILKR--GYHPDVITLTTLIKGLCLRGEV 155
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A++ +++ V ++ ++ ++++ LC G+ A++L ++ P +
Sbjct: 156 KKALKFHDDVVAL--EFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKP-----D 208
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +N++ D C +A ++ +M + P+ +++ LI C G L EA L
Sbjct: 209 VVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLN 268
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM K +NPD YT+ +L+DA + ++ M+ + ++P++ YN LV V
Sbjct: 269 EMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVN 328
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+ AK F+ M + + SY M+ L +DE + + + I +
Sbjct: 329 EVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFN 388
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAE 331
+ G L K GR V L++K R++++
Sbjct: 389 SLIDG-LCKSGRIAYVWDLVDKM-RDRSQ 415
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 11/218 (5%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V SY ++ G + D LFEE+K K V+ + + + SL+ G G
Sbjct: 347 PGVQSYTIMIDGLCKTKMVDEAISLFEEMKHK--NVIPNTITFNSLIDGLCKSGRIAYVW 404
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ ++ + S + +S++DALC N D+A+ LF +M + P ++ ++
Sbjct: 405 DLVDKM--RDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQP-----DMYTY 457
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
++ DG C GR K A EVF+ + D ++ +I CK G+ EA L +M D
Sbjct: 458 TILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMED 517
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
G P+ T+ +++ A FE + D R+M+ GL
Sbjct: 518 NGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N++L +L +F A+ L ++H K + +L + N++ + +C G+ + V
Sbjct: 73 NNILSSLVKMQRFPTAISL-----SKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVL 127
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ + PD ++ LI LC G + +A + + ++ D +YG L++ ++
Sbjct: 128 ATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKI 187
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASY 266
R + + ++P++ +YN ++ L + ++ EA + + M K++ + +Y
Sbjct: 188 GETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTY 247
Query: 267 KFMMKALSDGGKLDE 281
++ G L E
Sbjct: 248 TTLIYGFCIMGCLIE 262
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Query: 134 YCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD 193
Y DA+ +F +M R P T FNN++ L K A L + KG+ D
Sbjct: 44 YNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSD 103
Query: 194 EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF- 252
T +L++ + ++ + ++ G P++ L+ L G + +A F
Sbjct: 104 LVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHD 163
Query: 253 DIMVKKLKMDDASYKFMMKALSDGG 277
D++ + ++D SY ++ L G
Sbjct: 164 DVVALEFQLDRISYGTLINGLCKIG 188
>gi|449451938|ref|XP_004143717.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
Length = 460
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 146/323 (45%), Gaps = 24/323 (7%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V D + Y+ L+ G+ + D D + +F ++++ G+ + +Y SLM E
Sbjct: 37 GVVPDILTYNILINGYCQFSDMDAAYSVFHKMRD--AGITPNVFIYTSLMAAASRNSSLE 94
Query: 65 EAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKRLA 121
+ + ++E +G V + L GK DEA +F D + +H+P
Sbjct: 95 QCLNLFHEMLQLGITPDVWSYTTLTHCFLKV----GKPDEANSIFLDFILKDHSP----- 145
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG-------M 174
N +F+VM G+C G +AI +FR + + P ++++ L+ LCK M
Sbjct: 146 -NPATFDVMIFGFCSCGYTSNAITLFRNLQSHGLVPKFVTYDILLTGLCKAARLNVSVSM 204
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
EA ++ E D G PD TY LM CF+ G F +M + GL N Y
Sbjct: 205 FNEAMSMFNEAIDSGFEPDSTTYIALMKCCFKFREYQHGFEIFFEMKNKGLAFNGFGYYT 264
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+G L+++G L+EAK F M+K + + Y ++ GKL+ +++ I +
Sbjct: 265 AIGALLRLGRLEEAKFFMVEMIKNGVVFNLVFYNTVVNLYCKHGKLEAAHKMLDKI-ESR 323
Query: 294 GIEFSEELQEFVKGELSKEGREE 316
G++ ++ + L K G E
Sbjct: 324 GLQCNDYTHAIITDGLCKVGNFE 346
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 117/279 (41%), Gaps = 20/279 (7%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG------- 61
+P + ++ GF G + LF L+ G+V V Y L+ G
Sbjct: 146 NPATFDVMIFGFCSCGYTSNAITLFRNLQSH--GLVPKFVTYDILLTGLCKAARLNVSVS 203
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
M EAM +NEA+ +S + + +++ ++ ++F MKN K LA
Sbjct: 204 MFNEAMSMFNEAI--DSGFEPDSTTYIALMKCCFKFREYQHGFEIFFEMKN-----KGLA 256
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N + GR ++A +M + + + +N +++ CK+G L A ++
Sbjct: 257 FNGFGYYTAIGALLRLGRLEEAKFFMVEMIKNGVVFNLVFYNTVVNLYCKHGKLEAAHKM 316
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR-PNLAVYNRLVGKLV 240
++ +G+ ++YT+ ++ D +V + + + +G N+ + L+ +L
Sbjct: 317 LDKIESRGLQCNDYTHAIITDGLCKVGNFEGARRHLNYIYPTGFTNSNVVASSCLIDRLC 376
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKL 279
+ G +D+A F++M K D Y +M L +
Sbjct: 377 KAGQIDQAMQLFELMETK---DPYVYTSLMHNLCKARRF 412
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+ CK+ +AE + GV PD TY +L++ + + +D + F KM D+G+
Sbjct: 14 VASFCKSHQFQKAEIAIKDAIRLGVVPDILTYNILINGYCQFSDMDAAYSVFHKMRDAGI 73
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
PN+ +Y L+ + L++ + F M++ + D SY + GK DE
Sbjct: 74 TPNVFIYTSLMAAASRNSSLEQCLNLFHEMLQLGITPDVWSYTTLTHCFLKVGKPDE 130
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + + V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A +LFD M + P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E+++ M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 110/231 (47%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKLMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 5/200 (2%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+ + Y G +DAIE +R E++ + +++ L K Y E
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ G Y + +LM + + + + F + LRP++ +N L+ +++G LD
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 247 EAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
E + M ++ D +Y ++ L K+D+ E+ +LD+G + +
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 306 KGELSKEGREE---EVVKLM 322
G K GR + E+ KLM
Sbjct: 249 DGH-CKNGRVDLAMEIYKLM 267
>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Brachypodium distachyon]
Length = 684
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 6/245 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N V+D G D+A ++ M+ + P NL +FN + GY G +A V
Sbjct: 425 NMVIDCFVKAGAVDKAAEIIKEMREKGVLP-----NLVTFNTLISGYSKLGNVHNAKAVL 479
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ + E+ PD ++F +LI+ LC L +A + + EM++ GV P+ +TY +LM A
Sbjct: 480 KMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSA 539
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASY 266
V+ KM G+ P+ +N + ++ +D+A++ F+ M++ + D+ +Y
Sbjct: 540 GHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKARNIFNAMLRLGVVPDNYTY 599
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
++KAL D ++DE EI+ + G + + L+K G+ + +LM K
Sbjct: 600 NSLIKALCDERRIDEAKEILLLMESSGSSATTHHTHLPIVSALTKTGQFSKAGQLMNKYN 659
Query: 327 REKAE 331
R +
Sbjct: 660 RRNVQ 664
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 9/224 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G ++ Y+ ++ FV+ G D + +E++EK GV+ + V + +L+ GY
Sbjct: 412 MVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREK--GVLPNLVTFNTLISGYSKL 469
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A + + + E+ + + S+++ LC+ + D+A F+ M P
Sbjct: 470 GNVHNA-KAVLKMLMEHGLIP-DIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRP--- 524
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++NV+ C G AI++ KM + +PD SFN I C+ + +A
Sbjct: 525 --NAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKARN 582
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
++ M GV PD YTY L+ A + R+D+ M SG
Sbjct: 583 IFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLMESSG 626
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F++M C PD ++N L+ +C+ G++ EA L +M G+ P+ +TY +L+D
Sbjct: 199 FQQMPADGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCN 258
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLV-GKLVQVGMLDEAKSFFDIMVKKLKMDDAS 265
R +D F M + G+ PN A Y LV G +G + + ++ ++
Sbjct: 259 AGRPEDAVHVFDTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSA 318
Query: 266 YKFMMKALSDGGKLDEILEIV 286
++ M+ LS E++E+
Sbjct: 319 WQCMLYCLSKNEMAKEVVEVT 339
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A EVF +M P T +N LI + G + A + +M G PD +TY L+
Sbjct: 160 AHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVH 219
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+ +D+ R+M +G+RPN+ Y LV G ++A FD M +K +
Sbjct: 220 GVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSP 279
Query: 262 DDASYKFMMK 271
++ASY+ ++
Sbjct: 280 NEASYRTLVH 289
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/391 (19%), Positives = 149/391 (38%), Gaps = 73/391 (18%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G VY+ L++ VR G D + F+++ G D Y +L+ G +G+ +
Sbjct: 171 GLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPAD--GCQPDCFTYNTLVHGVCQRGIID 228
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK----RL 120
EA+ + E + ++ + ++D CN G+ ++A+ +FD MK + P R
Sbjct: 229 EALRLVRQM--EGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRT 286
Query: 121 AVNLGSFNVMADG-------------------------YCGQGR--FKDAIEVFRKMGEY 153
V+ G+F + YC K+ +EV +KM
Sbjct: 287 LVH-GAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSR 345
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP--DEY---------------- 195
D F ++ K L++ L + KG NP D Y
Sbjct: 346 GYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKA 405
Query: 196 -----------------TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+Y +++D + VD A ++M + G+ PNL +N L+
Sbjct: 406 NHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISG 465
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
++G + AK+ ++++ L D ++ ++ L +LD+ + + + G+
Sbjct: 466 YSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNE-MAEWGVRP 524
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKERE 328
+ + L G + + L+ K +++
Sbjct: 525 NAHTYNVLMHALCSAGHVNKAIDLLNKMKKD 555
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 1/171 (0%)
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
LI + G+ A E++ +M G+ P Y L+ A VD F++M G
Sbjct: 147 LIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADG 206
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEIL 283
+P+ YN LV + Q G++DEA M ++ + +Y ++ + G+ ++ +
Sbjct: 207 CQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAV 266
Query: 284 EIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKA 334
+ + + G + V G GR + V L E RE +
Sbjct: 267 HVFDTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHS 317
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 52 SLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK 111
+L+ + G+ + A E + + ++ S N+++ A G D A F +M
Sbjct: 146 ALIASWGRLGLAQYAHEVFVQM--PRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMP 203
Query: 112 NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCK 171
+ P + ++N + G C +G +A+ + R+M P+ ++ L+D C
Sbjct: 204 ADGCQP-----DCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCN 258
Query: 172 NGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
G +A ++ M +KGV+P+E +Y L+ F
Sbjct: 259 AGRPEDAVHVFDTMKEKGVSPNEASYRTLVHGAFR 293
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 121/236 (51%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ L+ + G D F++ E+ K ++ + V Y +++ GY
Sbjct: 317 MLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRK--HIMPNVVTYSTVIDGYAKA 374
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+ +NE + +S+ + V+ N++L G+F+EAL + M E + K+
Sbjct: 375 GRLDEALNLFNEM--KFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEM--ESSGIKKD 430
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
AV ++N + GY QG++++ VF +M R P+ L+++ LID K G+ EA E
Sbjct: 431 AV---TYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAME 487
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++ E G+ D Y L+DA + V+ ++ +M G+RPN+ YN ++
Sbjct: 488 VFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSII 543
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 155/327 (47%), Gaps = 26/327 (7%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFE------ELKEKLGGVVSDGV-VYGSLMKGYFMKGMEEE 65
Y++L+ G+ R FE + + + G + S + + G L + K + E
Sbjct: 151 YTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFET 210
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A+ NE G + A ++++ A +G DEA+K+F+ MK+ P NL
Sbjct: 211 AL---NEGYGN------TVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKP-----NLV 256
Query: 126 SFNVMADGYCGQG--RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + D CG+G F A E+F +M PD ++FN+L+ + G+ A L+
Sbjct: 257 TYNAVIDA-CGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFS 315
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM +G+ D +TY L+DA + ++D +M + PN+ Y+ ++ + G
Sbjct: 316 EMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAG 375
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDEA + F+ M + +D SY ++ + G+ +E L + ++ GI+
Sbjct: 376 RLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKE-MESSGIKKDAVTY 434
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREK 329
+ G K+G+ EEV ++ E+ + E+
Sbjct: 435 NALLGGYGKQGKYEEVKRVFEEMKAER 461
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 133/285 (46%), Gaps = 10/285 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + ++ L+ R G + LF E+ + G+ D Y +L+
Sbjct: 282 MLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYR--GIEQDIFTYNTLLDAVCKG 339
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A + +E + + V ++V+D G+ DEAL LF+ MK +
Sbjct: 340 GQMDLAFQIMSEM--PRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKF-----ASI 392
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+N + Y GRF++A+ V ++M D +++N L+ K G E +
Sbjct: 393 GLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKR 452
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ EM + + P+ TY L+D + + FR+ +GL+ ++ +Y+ L+ L
Sbjct: 453 VFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALC 512
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILE 284
+ G+++ A SF D M K+ ++ + +Y ++ A G + +++
Sbjct: 513 KNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVID 557
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 146/322 (45%), Gaps = 11/322 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + +++ + + G D +F ++++ G+ D V YG+L+
Sbjct: 21 MVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQH--GLSPDAVSYGALIDALCKL 78
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A +N+ + N V + V +S++ LC+ K+++ +LF M N P
Sbjct: 79 GRVDDAEVKFNQMI--NEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHP--- 133
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ FN + C +GR + + + PD +S+N LID C G + EA +
Sbjct: 134 --NIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASK 191
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M G+ P+ ++Y L+ + R+D + FRKM+ +G+ P + YN ++ L
Sbjct: 192 LLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLF 251
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
Q EAK + M+ K +Y ++ L +DE ++ + G++ +
Sbjct: 252 QTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSK-GLQLNI 310
Query: 300 ELQEFVKGELSKEGREEEVVKL 321
+ G L K GR+E+ + L
Sbjct: 311 ITFTIMIGALLKGGRKEDAMDL 332
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 150/325 (46%), Gaps = 27/325 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLM-----K 55
M +G + VV+S L+ G + V LF E+ G+ + V + +++ +
Sbjct: 91 MINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNV--GIHPNIVFFNTILCNLCKE 148
Query: 56 GYFMKGME-EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH 114
G M+G +++EC V+ ++ N+++D C G DEA KL + M +
Sbjct: 149 GRVMEGQRLVDSIECM--------GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 200
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
P S+N + GYC GR A +FRKM +P +++N ++ L +
Sbjct: 201 LKPNSF-----SYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKR 255
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+EA+ELY M + G YTY +++ + N VD+ F+ + GL+ N+ +
Sbjct: 256 FSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 315
Query: 235 LVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++G L++ G ++A F I L D +Y+ + + L + G L+E + + +G
Sbjct: 316 MIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNG 375
Query: 294 GIEFSEELQEFV-----KGELSKEG 313
S+ L V +G++S+ G
Sbjct: 376 TAPNSQMLNALVRRLLHRGDISRAG 400
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 7/230 (3%)
Query: 96 NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
N G E L + M P N FN+ Y G A+++F KM ++
Sbjct: 7 NKGALSEMHDLLNLMVANGISP-----NHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGL 61
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
SPD +S+ LID LCK G + +AE + +M ++GV P+ + L+ +++ +
Sbjct: 62 SPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEE 121
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALS 274
F +M++ G+ PN+ +N ++ L + G + E + D I ++ D SY ++
Sbjct: 122 LFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHC 181
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
G +DE +++ G++ G S + G K GR + L K
Sbjct: 182 LAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHG-YCKAGRIDSAYSLFRK 230
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 18/247 (7%)
Query: 53 LMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN 112
++ GY KG E + N V S N A G D+A+ +F++M+
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIF--NIFFSAYAKCGMIDKAMDIFNKMRQ 58
Query: 113 EHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
P + S+ + D C GR DA F +M +P+ + F++L+ LC
Sbjct: 59 HGLSPDAV-----SYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSI 113
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYG-LLMDACFEVNRVDDGATYFRKMVDS----GLRP 227
+ EEL+ EM + G++P+ + +L + C E RV +G +++VDS G+RP
Sbjct: 114 DKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKE-GRVMEG----QRLVDSIECMGVRP 168
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
++ YN L+ G +DEA + MV LK + SY ++ G++D +
Sbjct: 169 DVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLF 228
Query: 287 GGILDDG 293
+L +G
Sbjct: 229 RKMLSNG 235
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 109/248 (43%), Gaps = 9/248 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D + Y+ L+ G G D +L E + G+ + Y +L+ GY G +
Sbjct: 165 GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSV--GLKPNSFSYNTLLHGYCKAGRID 222
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + + + ++ + V N++L L +F EA +L+ M N +
Sbjct: 223 SAYSLFRKML--SNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT-----KWGI 275
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G C +A ++F+ + + ++F +I L K G +A +L+
Sbjct: 276 YTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAA 335
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ G+ PD TY ++ + E +++ + F M +G PN + N LV +L+ G
Sbjct: 336 IPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGD 395
Query: 245 LDEAKSFF 252
+ A ++
Sbjct: 396 ISRAGAYL 403
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG Y+ L+ + +D + +E++EK G+ D + Y L+ GY
Sbjct: 352 MLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK--GISPDAITYNILINGYCRC 409
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A ++E + S +K + S+L L + EA LF ++ +E P +
Sbjct: 410 ANAKKAFLLHDEMLA--SGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVI 467
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
FN + DG+C K A E+ + M + PD ++FN ++ C+ G + EA E
Sbjct: 468 M-----FNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM +G+ PD ++ L+ + D +M+D+G P + YN LV L
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ D A+ MV K + DD +Y +++ ++ DE
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 10/261 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+V+ YL+ +D F F +KEK GV+ SL+ + E A Y
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEK--GVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E +K S N +++ LC GK +A M+ P N+ ++N +
Sbjct: 210 AEMF--RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKP-----NIVTYNTI 262
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
GYC GR + A + M + PD+ ++ +LI +CK G L EA +++ EM KG+
Sbjct: 263 VHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGL 322
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P Y L+D +D + Y +M+ G+ P ++ YN L+ L DEA+
Sbjct: 323 RPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAEC 382
Query: 251 FF-DIMVKKLKMDDASYKFMM 270
+I K + D +Y ++
Sbjct: 383 MIKEIQEKGISPDAITYNILI 403
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 9/247 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D + Y+ L+ G+ R ++ F L +E+ G+ Y SL+ K
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLA--SGIKPTKKTYTSLLHVLSKKNRM 447
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + + + E V + N+++D C+N A +L M PP +
Sbjct: 448 KEADDLFKKITSEG--VLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEV--- 502
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+FN + G+C +G+ ++A E+F +M PD +SFN LI + G + +A +
Sbjct: 503 --TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRN 560
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM D G NP TY L+ + D ++MV G+ P+ Y L+ + +V
Sbjct: 561 EMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620
Query: 244 MLDEAKS 250
+ DE K+
Sbjct: 621 IPDENKN 627
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 124/262 (47%), Gaps = 13/262 (4%)
Query: 24 GDSDGVFRLFEEL---KEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSV 80
G ++ + +FE L +++LG +V+ L+K +EA EC+ + V
Sbjct: 127 GTTNSIREIFEFLAASRDRLG--FKSSIVFDYLIKSCCDMNRADEAFECF--YTMKEKGV 182
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRF 140
+ NS+L + + A L+ M R+ ++ +FN+M + C +G+
Sbjct: 183 LPTIETCNSLLSLFLKLNRTEAAWVLYAEMFR-----LRIKSSVYTFNIMINVLCKEGKL 237
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
K A + M P+ +++N ++ C +G + A+ + M + + PD +TYG L
Sbjct: 238 KKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSL 297
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-L 259
+ + R+++ + F +MV GLRP+ +YN L+ G LD A ++ D M+KK +
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Query: 260 KMDDASYKFMMKALSDGGKLDE 281
++Y ++ AL + DE
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDE 379
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 9/239 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++GD + + + G+ V + +L+ GY G +
Sbjct: 129 GYPASLYFFNILMQRFCKEGDIRVAQLVLNAITK--WGLRPSVVSFNTLINGYIRLGDLD 186
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++ S V+ + +++ LC K D+A +LFD M ++ P N
Sbjct: 187 EGFRL--KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVP-----NG 239
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A +L E
Sbjct: 240 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDE 299
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
MS +G+ PD+ TY L+D C + ++ + ++M+ +R + VY L+ L Q G
Sbjct: 300 MSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEG 358
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 8/256 (3%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
+F + E G SD V+ L+ Y G +A+ECY V + VL
Sbjct: 49 VFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPLDTC--RKVL 106
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ L F + + P +L FN++ +C +G + A V +
Sbjct: 107 EHLMKLKYFKLVWGFYKEILECGYP-----ASLYFFNILMQRFCKEGDIRVAQLVLNAIT 161
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
++ P +SFN LI+ + G L E L M GV PD YTY +L++ + +++D
Sbjct: 162 KWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMD 221
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMM 270
D F +M+D G+ PN + L+ + G +D A + M+ + L D +Y ++
Sbjct: 222 DANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 281
Query: 271 KALSDGGKLDEILEIV 286
L G+L + +++
Sbjct: 282 YGLCKKGELKQAHDLI 297
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 9/193 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ +K G+V +GV + +L+ G+
Sbjct: 195 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDK--GMVPNGVTFTTLIDGHCKN 252
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G+ +A L D M E P ++
Sbjct: 253 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKI 310
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D + + LI LC+ G +AE+
Sbjct: 311 -----TYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEK 365
Query: 181 LYGEMSDKGVNPD 193
+ EM G+ P+
Sbjct: 366 MLREMLSVGLKPN 378
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 12/321 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ L+ G+ + D ++ ++E+ +V D YG L+ GY G
Sbjct: 256 KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE-AALVPDERAYGVLIDGYCRTGKI 314
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+ +E + +K + NS+++ C G+ EA + RM + + P
Sbjct: 315 DDAVRLLDEML--RLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSY--- 369
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N + DGYC +G +A + KM + P L++N L+ LC+ G +A +++
Sbjct: 370 --SYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 427
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +GV PDE Y L+D F++ + +T ++ ++ G + +N ++ L ++G
Sbjct: 428 LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMG 487
Query: 244 MLDEAKSFFDIMVKKL--KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+ EA+ FD M K L D +Y+ ++ + + + V G ++ I S E+
Sbjct: 488 KMVEAEEIFDKM-KDLGCSPDGITYRTLIDGYCKASNVGQAFK-VKGAMEREPISPSIEM 545
Query: 302 QEFVKGELSKEGREEEVVKLM 322
+ L K R EV L+
Sbjct: 546 YNSLISGLFKSRRLVEVTDLL 566
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 146/303 (48%), Gaps = 15/303 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P YSY L+ G+ R+G + F L +++ ++ G+ + Y +L+KG G ++A+
Sbjct: 366 PDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE--GIEPTVLTYNTLLKGLCRVGAFDDAL 423
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ ++ + V V +++LD L F+ A L+ + R+ +F
Sbjct: 424 QIWHLMM--KRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI-----TF 476
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N M G C G+ +A E+F KM + CSPD +++ LID CK + +A ++ G M
Sbjct: 477 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 536
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+ ++P Y L+ F+ R+ + +M GL PN+ Y L+ + GMLD+
Sbjct: 537 EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 596
Query: 248 A-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A S+F++ L + M+ L G++DE ++ ++D G F + + F+K
Sbjct: 597 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG---FFPDHECFLK 653
Query: 307 GEL 309
++
Sbjct: 654 SDI 656
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 19/279 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSD---GVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M G V D + S ++ F +DG D G + E L GV + V Y SL+ GY
Sbjct: 183 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENL-----GVEPNIVTYHSLINGY 237
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN-- 115
G + EA + + + E V + V ++ C K DEA K+ M+ E
Sbjct: 238 VSLG-DVEAAKGVLKFMSE-KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALV 295
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P +R ++ V+ DGYC G+ DA+ + +M + N+LI+ CK G +
Sbjct: 296 PDER------AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEI 349
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
EAE + M D + PD Y+Y L+D + KM+ G+ P + YN L
Sbjct: 350 HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 409
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
+ L +VG D+A + +M+K+ + D+ Y ++ L
Sbjct: 410 LKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 448
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 105/202 (51%), Gaps = 1/202 (0%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+++ Y +G K+A+ VF MG+ P S N+L++ L KNG A +Y +M
Sbjct: 125 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 184
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G+ PD + ++++A + +VD+ A + +KM + G+ PN+ Y+ L+ V +G ++
Sbjct: 185 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 244
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
AK M +K + + +Y ++K K+DE +++ G+ ++ + E +
Sbjct: 245 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 304
Query: 306 KGELSKEGREEEVVKLMEKKER 327
+ G+ ++ V+L+++ R
Sbjct: 305 IDGYCRTGKIDDAVRLLDEMLR 326
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 32/266 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G + V Y L+ G+ ++G D F + E+ E G+ ++ ++ +++ G +
Sbjct: 569 MGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTEN--GLSANIIICSTMVSGLYRL 626
Query: 61 GMEEEAMECYNEAVGE----------NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM 110
G +EA + V S ++ +A+ + D+L DE+ K F
Sbjct: 627 GRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAI--QKIADSL------DESCKTF--- 675
Query: 111 KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLC 170
L N +N+ G C G+ DA F + PD ++ LI
Sbjct: 676 ---------LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYS 726
Query: 171 KNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
G + EA L EM +G+ P+ TY L++ + VD F K+ GL PN+
Sbjct: 727 AAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVV 786
Query: 231 VYNRLVGKLVQVGMLDEAKSFFDIMV 256
YN L+ ++G +D A D M+
Sbjct: 787 TYNTLIDGYCKIGNMDAAFKLKDKMI 812
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 7/226 (3%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
++E VG S + +L G AL +FD M P +L S N
Sbjct: 108 WDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIP-----SLRSCNS 162
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ + G A V+++M PD + +++ CK+G + EA +M + G
Sbjct: 163 LLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLG 222
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
V P+ TY L++ + V+ + M + G+ N+ Y L+ + +DEA+
Sbjct: 223 VEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAE 282
Query: 250 SFFDIMVKK--LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
M ++ L D+ +Y ++ GK+D+ + ++ +L G
Sbjct: 283 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG 328
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 146/310 (47%), Gaps = 21/310 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ L+ G RL ++ +K + + + Y +L+ + G
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK--KITPNVITYSALLDAFVKNGKV 276
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E + E V S+ V +S+++ LC + + DEA ++FD M + K +
Sbjct: 277 LEAKELFEEMV--RMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVS-----KGCLAD 329
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ S+N + +G+C R +D +++FR+M + +T+++N LI + G + +A+E +
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M G++PD +TY +L+ + ++ F M + ++ Y ++ + + G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI-----------LD 291
++EA S F + +K LK D +Y MM L G L E+ + + L
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Query: 292 DGGIEFSEEL 301
DG I S EL
Sbjct: 510 DGDITLSAEL 519
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 136/286 (47%), Gaps = 10/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G+ D V L+ GF R L +++ E G D V Y +++
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI--GYKPDIVAYNAIIDSLCKT 203
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A + + E E ++ + V ++++ LCN+ ++ +A +L M + P
Sbjct: 204 KRVNDAFDFFKEI--ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP--- 258
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +++ + D + G+ +A E+F +M PD +++++L++ LC + + EA +
Sbjct: 259 --NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQ 316
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M KG D +Y L++ + RV+DG FR+M GL N YN L+
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 241 QVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
Q G +D+A+ FF M + D +Y ++ L D G+L++ L I
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 138/278 (49%), Gaps = 10/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D V Y+ ++ + + F F+E++ K G+ + V Y +L+ G
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK--GIRPNVVTYTALVNGLCNSSRWS 242
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A ++ + + + + + +++LDA NGK EA +LF+ M P ++
Sbjct: 243 DAARLLSDMIKKK--ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP-----DI 295
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + +G C R +A ++F M C D +S+N LI+ CK + + +L+ E
Sbjct: 296 VTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS +G+ + TY L+ F+ VD +F +M G+ P++ YN L+G L G
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
L++A F+ M K+ + +D +Y +++ + GK++E
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 10/206 (4%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV--NLGSFNVMADGYCGQGRF 140
S V N +L A+ K+D + L +M+ L + +L +FN++ + +C +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKME-------VLGIRNDLYTFNIVINCFCCCFQV 136
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
A+ + KM + PD ++ +L++ C+ +++A L +M + G PD Y +
Sbjct: 137 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 196
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML-DEAKSFFDIMVKKL 259
+D+ + RV+D +F+++ G+RPN+ Y LV L D A+ D++ KK+
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 260 KMDDASYKFMMKALSDGGKLDEILEI 285
+ +Y ++ A GK+ E E+
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKEL 282
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 42/225 (18%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ DAI++F M + R P + FN L+ + K L +M G+ D YT+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 199 LLMD---ACFEV--------------------------------NRVDDGATYFRKMVDS 223
++++ CF+V NRV D + KMV+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
G +P++ YN ++ L + +++A FF +I K ++ + +Y ++ L + + +
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 283 LEIVGGI----LDDGGIEFSEELQEFVKGELSKEGRE--EEVVKL 321
++ + + I +S L FVK E +E EE+V++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 2/208 (0%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ N+ +FN++ GYC + +FKDA+E MG+Y CSPD +++N ++D LCK G L +A
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDAR 263
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L +M +G+ P+ TY +L+ ++ + + A M + L P++ YN L+ L
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323
Query: 240 VQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
G ++EA D M KL D SY ++ + K+ E +++ + + G++ +
Sbjct: 324 CNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEE-MSEKGVKPN 382
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKE 326
+ KEG+ ++ + K E
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKME 410
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 149/321 (46%), Gaps = 39/321 (12%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+V + + ++ GY ++ ++A+E N N S V N++LD LC G+
Sbjct: 203 GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSP--DNVTYNTILDTLCKKGRLG 260
Query: 102 EALKLFDRMKNEHNPPKRLAVNL------------------------------GSFNVMA 131
+A L MK+ P R N+ ++N++
Sbjct: 261 DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLI 320
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
+G C +GR ++A ++ +M + PD +S+N LI+ + ++EA +L EMS+KGV
Sbjct: 321 NGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVK 380
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P+ T+ +++ + ++DD + KM +SG P+ YN L+ + G + EA
Sbjct: 381 PNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRT 440
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ--EFVKGE 308
D M +K +KMD + +++ L KL+E +++ G F +E+ + G
Sbjct: 441 MDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG--YFIDEVSYGTLIVGY 498
Query: 309 LSKEGREEEVVKLM-EKKERE 328
K+G + +KL E KE+E
Sbjct: 499 F-KDGNVDRALKLWDEMKEKE 518
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 153/369 (41%), Gaps = 63/369 (17%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK-------------------------- 39
+ D V Y+ L+ G + F+L EE+ EK
Sbjct: 344 LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDAS 403
Query: 40 -------LGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLD 92
G D V Y +L+ GY G EA +E +N +KM +V N++L
Sbjct: 404 NTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN--MKMDSVTLNTILR 461
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
LC K +EA KL + + ++ S+ + GY G A++++ +M E
Sbjct: 462 TLCREKKLEEAYKLLSSARK-----RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE 516
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
P T+++N +I LC+ G +A E+ + G+ PDE TY ++ V+
Sbjct: 517 KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEK 576
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK-MDDASYKFMMK 271
+ KMV++ +P++ N L+ L G+L++A F+ V K K +D +Y ++
Sbjct: 577 AFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLIT 636
Query: 272 ALSDGGKLDEILE-------------------IVGGILDDGGIEFSEELQEFVKGELSKE 312
+L G+LD+ I+ + D G I E +EF+ L K
Sbjct: 637 SLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRI---REAEEFMSKMLEKG 693
Query: 313 GREEEVVKL 321
++V++L
Sbjct: 694 NLPDQVLQL 702
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 9/260 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K D V + ++ R+ + ++L +++ G D V YG+L+ GYF G
Sbjct: 447 KNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR--GYFIDEVSYGTLIVGYFKDGNV 504
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A++ ++E + + S V N ++ LC GK ++A+ + + P
Sbjct: 505 DRALKLWDEM--KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE---- 558
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + GYC +G + A + KM E PD + N L+ LC G+L +A +L+
Sbjct: 559 -TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFN 617
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
KG D TY L+ + + R+DD +M + L P+ YN ++ L G
Sbjct: 618 TWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSG 677
Query: 244 MLDEAKSFFDIMVKKLKMDD 263
+ EA+ F M++K + D
Sbjct: 678 RIREAEEFMSKMLEKGNLPD 697
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 133/287 (46%), Gaps = 12/287 (4%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V++Y ML G +G + F+L +E+ E L ++ D V Y +L+ G EA
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEM-ENLK-LLPDVVSYNTLINGCLEWSKISEAF 368
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E VK +AV +N ++ C GK D+A +M+ P + ++
Sbjct: 369 KLLEEM--SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP-----DCVTY 421
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + +GYC G +A +MG D+++ N ++ LC+ L EA +L
Sbjct: 422 NTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARK 481
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G DE +YG L+ F+ VD + +M + + P+ YN ++G L Q G ++
Sbjct: 482 RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
A S + +++ L D+ +Y ++ G +++ + ++++
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 32/221 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D Y+ ++ G+ R+GD + F+ ++ E D L++G M+G+ E
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE--NSFKPDVFTCNILLRGLCMEGVLE 610
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A++ +N V + ++ V N+++ +LC G+ D+A L M+ K L +
Sbjct: 611 KALKLFNTWVSKGKAI--DTVTYNTLITSLCKEGRLDDAFNLLSEMEE-----KELGPDH 663
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD-----------------------TLS 161
++N + GR ++A E KM E PD +++
Sbjct: 664 YTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVA 723
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
++ I +LC G +A ++GE KG+ D+ TY LMD
Sbjct: 724 YSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMD 764
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 9/202 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADG---YCGQGRFKDAI 144
++ + A +G+ A ++F +MK RL NL + N + + Y +
Sbjct: 139 DTAIGAYVQSGQPHHAFQIFKKMKR-----LRLRPNLLTCNTLLNSLVRYPSSHSVSFSR 193
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
E F + P+ +FN +I C +A E M +PD TY ++D
Sbjct: 194 EAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTL 253
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDD 263
+ R+ D M GL PN YN LV ++G L EA + ++M + L D
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDV 313
Query: 264 ASYKFMMKALSDGGKLDEILEI 285
+Y ++ L + G+++E ++
Sbjct: 314 WTYNMLINGLCNEGRIEEAFKL 335
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 147/348 (42%), Gaps = 36/348 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V++ L+ + R G D +FE+++ K G++ D V + +++
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK--GMIPDTVTFATVISSLCRI 308
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-- 118
G ++A+ +N V + V S ++ CN+G+ +A +L M N+ PP
Sbjct: 309 GRLDDALHKFNHMV--DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 366
Query: 119 --------------RLA---------------VNLGSFNVMADGYCGQGRFKDAIEVFRK 149
R+A N+ +FN + +GYC G ++A +
Sbjct: 367 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 426
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M P+ + L+D CKNG + +A ++ +M KGV P Y +++ F+ R
Sbjct: 427 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 486
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKF 268
F +M++SG ++ Y ++G L + DEA + + +K D ++
Sbjct: 487 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 546
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
++ A+ G+ E E+ I G + + + + +E EE
Sbjct: 547 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 594
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 13/257 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D YS ++ G + D R+ E++ E G + + Y SL+ GY + GM
Sbjct: 113 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE--AGTRPNSITYNSLIHGYSISGMWN 170
Query: 65 EAMECYNEAVGENSSVKMSAVAN-NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E++ + + +S + V N NS + AL +G+ +EA +FD M + P +
Sbjct: 171 ESVRVFKQM---SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKP-----D 222
Query: 124 LGSFNVMADGYCG--QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+ S++ M GY D +F M +P+ FN LI+ + GM+ +A +
Sbjct: 223 IISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 282
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ +M +KG+ PD T+ ++ + + R+DD F MVD G+ P+ AVY L+
Sbjct: 283 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCN 342
Query: 242 VGMLDEAKSFFDIMVKK 258
G L +AK M+ K
Sbjct: 343 HGELVKAKELISEMMNK 359
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 141/294 (47%), Gaps = 31/294 (10%)
Query: 13 YSY-LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF-MKGMEEEAMECY 70
+SY L+ GFV+DG+ D LF E+ E+ GV+ ++ S++K MK M++
Sbjct: 50 FSYSLIYGFVKDGEVDKAHCLFLEMMEQ--GVLPKILICNSIIKELCKMKEMDKA----- 102
Query: 71 NEAVGE---NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E++ + +S + + ++D LC + D+A ++ ++M P + ++
Sbjct: 103 -ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSI-----TY 156
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + GY G + +++ VF++M P + N+ I L K+G EA+ ++ M
Sbjct: 157 NSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVL 216
Query: 188 KGVNPDEYTYGLLM-------DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
KG PD +Y ++ D+C D F M+ G+ PN V+N L+
Sbjct: 217 KGPKPDIISYSTMLHGYATATDSCLA-----DVHNIFNLMLTKGIAPNKHVFNILINAYA 271
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ GM+D+A F D+ K + D ++ ++ +L G+LD+ L ++D G
Sbjct: 272 RCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 325
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 148/392 (37%), Gaps = 84/392 (21%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + D V ++ ++ R G D F + + GV VYG L++G G
Sbjct: 289 KGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI--GVPPSEAVYGCLIQGCCNHGEL 346
Query: 64 EEAMECYNEAVGEN---------SSV-------------------------KMSAVANNS 89
+A E +E + ++ SS+ + + V NS
Sbjct: 347 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 406
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+++ C G +EA L D M + P N + + DGYC GR DA+ VFR
Sbjct: 407 LMEGYCLVGNMEEAFALLDAMASIGIEP-----NCYIYGTLVDGYCKNGRIDDALTVFRD 461
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG----------- 198
M P ++ ++ ++ L + A++++ EM + G +TYG
Sbjct: 462 MLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNC 521
Query: 199 ------------------------LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+++ A F+V R + F + GL PN+ Y+
Sbjct: 522 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSM 581
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS-YKFMMKAL---SDGGKLDEILEIVGGIL 290
++ L++ +EA + F + K D+ +++ L ++ K L I+G
Sbjct: 582 MITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIG--- 638
Query: 291 DDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
+ + + S+EG+ E +KL+
Sbjct: 639 -ENNLTLEASTISLLASLFSREGKYREHIKLL 669
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 4/173 (2%)
Query: 154 RCSPDTL-SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
R SP T+ ++N LID + + G + G+ PD+++Y L+ + VD
Sbjct: 8 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD-GEVDK 66
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
F +M++ G+ P + + N ++ +L ++ +D+A+S MV + D +Y ++
Sbjct: 67 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 126
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
L +D+ ++ +++ G S + G S G E V++ ++
Sbjct: 127 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG-YSISGMWNESVRVFKQ 178
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 147/348 (42%), Gaps = 36/348 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V++ L+ + R G D +FE+++ K G++ D V + +++
Sbjct: 414 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK--GMIPDTVTFATVISSLCRI 471
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-- 118
G ++A+ +N V + V S ++ CN+G+ +A +L M N+ PP
Sbjct: 472 GRLDDALHKFNHMV--DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 529
Query: 119 --------------RLA---------------VNLGSFNVMADGYCGQGRFKDAIEVFRK 149
R+A N+ +FN + +GYC G ++A +
Sbjct: 530 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 589
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M P+ + L+D CKNG + +A ++ +M KGV P Y +++ F+ R
Sbjct: 590 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 649
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKF 268
F +M++SG ++ Y ++G L + DEA + + +K D ++
Sbjct: 650 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 709
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
++ A+ G+ E E+ I G + + + + +E EE
Sbjct: 710 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 757
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 121/262 (46%), Gaps = 14/262 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS ++ G + D R+ E++ E G + + Y SL+ GY +
Sbjct: 271 MVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE--AGTRPNSITYNSLIHGYSIS 328
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVAN-NSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
GM E++ + + +S + V N NS + AL +G+ +EA +FD M + P
Sbjct: 329 GMWNESVRVFKQM---SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKP-- 383
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAI---EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
++ S++ A C + +F M +P+ FN LI+ + GM+
Sbjct: 384 ---DIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMD 440
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A ++ +M +KG+ PD T+ ++ + + R+DD F MVD G+ P+ AVY L+
Sbjct: 441 KAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLI 500
Query: 237 GKLVQVGMLDEAKSFFDIMVKK 258
G L +AK M+ K
Sbjct: 501 QGCCNHGELVKAKELISEMMNK 522
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 139/290 (47%), Gaps = 22/290 (7%)
Query: 13 YSY-LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF-MKGMEEEAMECY 70
+SY L+ GFV+DG+ D LF E+ E+ GV+ ++ S++K MK M++
Sbjct: 212 FSYSLIYGFVKDGEVDKAHCLFLEMMEQ--GVLPKILICNSIIKELCKMKEMDKA----- 264
Query: 71 NEAVGE---NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E++ + +S + + ++D LC + D+A ++ ++M P + ++
Sbjct: 265 -ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSI-----TY 318
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + GY G + +++ VF++M P + N+ I L K+G EA+ ++ M
Sbjct: 319 NSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVL 378
Query: 188 KGVNPDEYTYGLLMD-ACFEVNRVDDGATY--FRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
KG PD +Y C+ V + F M+ G+ PN V+N L+ + GM
Sbjct: 379 KGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGM 438
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+D+A F D+ K + D ++ ++ +L G+LD+ L ++D G
Sbjct: 439 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 488
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 149/395 (37%), Gaps = 84/395 (21%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + D V ++ ++ R G D F + + GV VYG L++G G
Sbjct: 452 KGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI--GVPPSEAVYGCLIQGCCNHGEL 509
Query: 64 EEAMECYNEAVGEN---------SSV-------------------------KMSAVANNS 89
+A E +E + ++ SS+ + + V NS
Sbjct: 510 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 569
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
+++ C G +EA L D M + P N + + DGYC GR DA+ VFR
Sbjct: 570 LMEGYCLVGNMEEAFALLDAMASIGIEP-----NCYIYGTLVDGYCKNGRIDDALTVFRD 624
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG----------- 198
M P ++ ++ ++ L + A++++ EM + G +TYG
Sbjct: 625 MLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNC 684
Query: 199 ------------------------LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+++ A F+V R + F + GL PN+ Y+
Sbjct: 685 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSM 744
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS-YKFMMKAL---SDGGKLDEILEIVGGIL 290
++ L++ +EA + F + K D+ +++ L ++ K L I+G
Sbjct: 745 MITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIG--- 801
Query: 291 DDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKK 325
+ + + S+EG+ E +KL+ K
Sbjct: 802 -ENNLTLEASTISLLASLFSREGKYREHIKLLPAK 835
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 7/187 (3%)
Query: 143 AIEVFRKMGEYRC---SPDTL-SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
AIE+F++M + C SP T+ ++N LID + + G + G+ PD+++Y
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
L+ + VD F +M++ G+ P + + N ++ +L ++ +D+A+S MV
Sbjct: 216 LIYGFVKD-GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274
Query: 259 -LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+ D +Y ++ L +D+ ++ +++ G S + G S G E
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG-YSISGMWNE 333
Query: 318 VVKLMEK 324
V++ ++
Sbjct: 334 SVRVFKQ 340
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 150/337 (44%), Gaps = 23/337 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G+ + + + L+ G G+ +++ + G D V YG+L+ G G
Sbjct: 125 RGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQ--GFQLDQVSYGTLINGLCKAGET 182
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ + E SVK V +++ LC N +A L+ M K ++ N
Sbjct: 183 KAVARLLRKL--EGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIV-----KGISPN 235
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + G+C G K+A + +M +PD +FN LID L K G + EA L+
Sbjct: 236 VFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFE 295
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM K + P+ TY L+D + + ++ +KM + G++PN+ Y L+ L + G
Sbjct: 296 EMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGG 355
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
L+ AK FF ++VK ++ +Y M+ L G +++++ + G + + +
Sbjct: 356 RLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFK 415
Query: 303 EFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+ L+EK E +KAE RE A
Sbjct: 416 TI-------------ICALLEKDENDKAEKFLREMIA 439
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 125/288 (43%), Gaps = 40/288 (13%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEEL--------------------KEKL--- 40
+GF D V Y L+ G + G++ V RL +L K KL
Sbjct: 160 QGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGD 219
Query: 41 ----------GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
G+ + Y +L+ G+ + G +EA NE +N + N +
Sbjct: 220 ACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKN--INPDVYTFNIL 277
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+DAL GK DEA+ LF+ MK+++ P N+ ++ + DG C + AI + +KM
Sbjct: 278 IDALAKEGKIDEAMSLFEEMKHKNMFP-----NIVTYTSLIDGLCKNHHLERAIALCKKM 332
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E P+ S+ L+D LCK G L A++ + + KG + + TY ++++ +
Sbjct: 333 KEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLF 392
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
D KM G PN + ++ L++ D+A+ F M+ +
Sbjct: 393 GDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIAR 440
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 9/225 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG + Y+ L+ GF G+ F L E+ KL + D + L+ +
Sbjct: 227 MIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEM--KLKNINPDVYTFNILIDALAKE 284
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EAM + E +N + V S++D LC N + A+ L +MK + P
Sbjct: 285 GKIDEAMSLFEEMKHKNMFPNI--VTYTSLIDGLCKNHHLERAIALCKKMKEQGIQP--- 339
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ S+ ++ D C GR ++A + F+ + + ++N +I+ LCK G+ + +
Sbjct: 340 --NVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMD 397
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
L +M KG P+ T+ ++ A E + D + R+M+ GL
Sbjct: 398 LKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 109/242 (45%), Gaps = 7/242 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N++L +L N ++ + LF + + P + +L + +++ + +C A VF
Sbjct: 65 NNILSSLVKNKRYPTVISLFKQFE-----PNGITPDLCTLSILINCFCHLTHITFAFSVF 119
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ + P+ ++ N LI LC G + A + ++ +G D+ +YG L++ +
Sbjct: 120 ANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKA 179
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASY 266
A RK+ ++P+L +Y ++ L + +L +A + +++VK + + +Y
Sbjct: 180 GETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTY 239
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
++ G L E ++ + I + L+KEG+ +E + L E+ +
Sbjct: 240 TTLIHGFCIMGNLKEAFSLLNE-MKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMK 298
Query: 327 RE 328
+
Sbjct: 299 HK 300
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 1/137 (0%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA+ F +M R P T FNN++ L KN L+ + G+ PD T +L+
Sbjct: 44 DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLK 260
+ + + + F ++ G PN N L+ L G + A F D ++ + +
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163
Query: 261 MDDASYKFMMKALSDGG 277
+D SY ++ L G
Sbjct: 164 LDQVSYGTLINGLCKAG 180
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 12/309 (3%)
Query: 10 PVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMEC 69
P VY+Y L S LF + GVV + V Y +LM M+ ME ++
Sbjct: 366 PNVYTYTSL-ISGQRVSRMAIGLFHRMSRD--GVVPNTVTYNALM-NVLMENMEIDSALI 421
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
+G++ + ++ + N ++ C G ++A+ + M P L ++N+
Sbjct: 422 VFNMMGKHGCLPNTS-SYNELIRGYCTIGDTEKAMSMLTNMLKGRPTP-----TLVTYNI 475
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ GYC G AI V M C PD S+ LI CK + A ++ EM D+G
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRG 535
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ P+E TY L+ + ++D A +M SG RPN+ YN L+ L + A+
Sbjct: 536 LCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 595
Query: 250 SFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGE 308
+M+ +K+ D +Y ++ L + G + LE+ ++ G + ++
Sbjct: 596 ELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQA- 654
Query: 309 LSKEGREEE 317
L +EGR EE
Sbjct: 655 LGQEGRVEE 663
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 150/346 (43%), Gaps = 65/346 (18%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ G+ GD+D R+ E +K G D Y L+ G+ E A +
Sbjct: 471 VTYNIIIKGYCDSGDTDVAIRVLELMKA--NGCQPDEWSYTELISGFCKISKMELASGMF 528
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------------- 117
NE + + + + V +++ C + K D A ++ +RMK P
Sbjct: 529 NEMM--DRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLT 586
Query: 118 -----------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
++++ ++ +++ + +G C G A+E+F KM ++ C P+
Sbjct: 587 KQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLH 646
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++++LI L + G + EAEE++ E+ +G+ PDE TY +++ C +VD + +M
Sbjct: 647 TYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEM 706
Query: 221 VDSGLRPNLAVYNRLV---------GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMK 271
+++G +P L Y+ L+ KLV + +F D ++ K
Sbjct: 707 INAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINK------------- 753
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+++ ++ L + E S +L + + LS+ GR E
Sbjct: 754 ---------DVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFE 790
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 112/287 (39%), Gaps = 48/287 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+F G D Y+ ++LG+ R+ D D F +F + E+ G + Y +L+ G
Sbjct: 254 VFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEE--GCEPNAATYSTLING---- 307
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
LCN+G+ +EAL M P
Sbjct: 308 ---------------------------------LCNSGRVNEALDFISEMTRHGVLP--- 331
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +F C GR +DA ++F M + C P+ ++ +LI + M A
Sbjct: 332 --TVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRM---AIG 386
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ MS GV P+ TY LM+ E +D F M G PN + YN L+
Sbjct: 387 LFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYC 446
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIV 286
+G ++A S M+K + +Y ++K D G D + ++
Sbjct: 447 TIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVL 493
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 118/261 (45%), Gaps = 13/261 (4%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
Y +L+ M M+ Y++ + E ++ + + NSV++ALC +G +A + +
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILRE--GLQPNLLIYNSVINALCKDGNVRDAESIIN 252
Query: 109 RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
++ P ++ M GYC A E+F +M E C P+ +++ LI+
Sbjct: 253 KVFKSGMKPDTF-----TYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLING 307
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
LC +G + EA + EM+ GV P +T+ + A ++ R++D F M G +PN
Sbjct: 308 LCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPN 367
Query: 229 LAVYNRLV-GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+ Y L+ G+ V A F M + + + +Y +M L + ++D L +
Sbjct: 368 VYTYTSLISGQRVS----RMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVF 423
Query: 287 GGILDDGGIEFSEELQEFVKG 307
+ G + + E ++G
Sbjct: 424 NMMGKHGCLPNTSSYNELIRG 444
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 118/302 (39%), Gaps = 32/302 (10%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V YS ++ G +G +F ++ + G + + Y SL++ +G EEA
Sbjct: 608 PDVVTYSTVINGLCNNGAIPLALEMFNKMVKH--GCLPNLHTYSSLIQALGQEGRVEEAE 665
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E ++E + + V +++ +GK D A M N P L ++
Sbjct: 666 EMFSEL--KKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQP-----TLQTY 718
Query: 128 NVMADGYCGQGRF---------------------KDAIEVFR-KMGEYRCSPDTLSFNNL 165
+V+ G + + KD I V K+ E ++ L
Sbjct: 719 DVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDAL 778
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+ +L ++G EA LY M + P++ TY + + +VD F+ M D
Sbjct: 779 LSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRC 838
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILE 284
+L Y L+ L Q+ EA+ F+ M+ + L D+ + ++ L G D +E
Sbjct: 839 ELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCME 898
Query: 285 IV 286
+
Sbjct: 899 FL 900
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 2/144 (1%)
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
S +G +TY L+ ++N + +++ GL+PNL +YN ++ L + G +
Sbjct: 185 SQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNV 244
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
+A+S + + K +K D +Y M+ LD EI +D+ G E +
Sbjct: 245 RDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNR-MDEEGCEPNAATYST 303
Query: 305 VKGELSKEGREEEVVKLMEKKERE 328
+ L GR E + + + R
Sbjct: 304 LINGLCNSGRVNEALDFISEMTRH 327
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 108/270 (40%), Gaps = 17/270 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + + YS L+ ++G + +F ELK++ G++ D V Y +++ M
Sbjct: 636 MVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQ--GLIPDEVTYVKMIEVCVMS 693
Query: 61 GMEEEAMECYNEAVG-------ENSSVKMSAVANNSV---LDALCN---NGKFDEALKLF 107
G + A + E + + V + + N V L AL N FD+ +
Sbjct: 694 GKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINK 753
Query: 108 DRMKNEHNPPKRLAVNLGS--FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
D + + L L ++ + GR+ +A ++R M P+ ++ +
Sbjct: 754 DVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHF 813
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+ L + + A +++ MSD+ Y L+ +++R + F KM+ L
Sbjct: 814 LISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRAL 873
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+ V+ L+ L+ G D F IM
Sbjct: 874 NADEIVWTILINGLLGAGYKDLCMEFLHIM 903
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 14/284 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D +++ L+ R G+ G+ LF +++ V D V YG L+ G G +A++
Sbjct: 130 DISIFNSLLTALGRAGNLRGMTELFTSMRD--ASVKPDVVTYGILLNGLCKSGHVGDALK 187
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD-RMKNEHNPPKRLAVNLGSF 127
+ S V N+V+D LC G+ +A+ D RM++ H A N ++
Sbjct: 188 VLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHG----CAPNAVTY 243
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N +AD +C G A ++ +M + +P+ ++ N +I LC+ G + A E + E
Sbjct: 244 NCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFRE--K 301
Query: 188 KGVNP----DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ V P + TY L A N VD F +M D G RP+ +Y ++ L Q G
Sbjct: 302 RTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAG 361
Query: 244 -MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+LD + + K+D +Y ++ KL E E++
Sbjct: 362 RLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELL 405
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 130/304 (42%), Gaps = 33/304 (10%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V G + V Y+ L F R GD ++ ++++ GV + + +++ G G
Sbjct: 233 VHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKE--GVAPNVITMNTIIGGLCRVGR 290
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE-HNPPKRLA 121
A+E + E + +AV +++ A + D A++LF M + H P +
Sbjct: 291 VGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMY 350
Query: 122 VNLGS-----------------------------FNVMADGYCGQGRFKDAIEVFRKMGE 152
+ S +N++ G+C + + +A E+ +M
Sbjct: 351 FTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKG 410
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
PD ++N L+ LCK G + +EL G M D G P T+G L+ + + D+
Sbjct: 411 VGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDE 470
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
FR M ++ ++PN +YN L+ L + +D A FD M +K + + +Y ++K
Sbjct: 471 ALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLK 530
Query: 272 ALSD 275
L D
Sbjct: 531 GLQD 534
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 135/328 (41%), Gaps = 13/328 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y L+ G + G ++ + + V D + +++ G G ++A+
Sbjct: 165 DVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAII 224
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+E + +AV N + DA C G A K+ RM+ E P N+ + N
Sbjct: 225 FVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAP-----NVITMN 279
Query: 129 VMADGYCGQGRFKDAIEVFRK----MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ G C GR A+E FR+ E R + ++++ L + A EL+ E
Sbjct: 280 TIIGGLCRVGRVGAALEFFREKRTVWPEAR--GNAVTYSTLASAFLHCNNVDMAMELFHE 337
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+D G PD Y ++ + R+ D T M +G + + YN L+G +
Sbjct: 338 MADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKK 397
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L EA + M L+ D +Y ++ L G + E++G ++DDG
Sbjct: 398 LHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGT 457
Query: 304 FVKGELSKEGREEEVVKLMEKKEREKAE 331
V G K G+ +E +++ + + +
Sbjct: 458 LVHG-YCKAGKTDEALRIFRSMDEARIQ 484
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 104/245 (42%), Gaps = 9/245 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V YS L F+ + D LF E+ + G D V+Y +++ G G +A C
Sbjct: 313 VTYSTLASAFLHCNNVDMAMELFHEMADH--GHRPDAVMYFTMISGLTQAGRLLDA--CT 368
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
A + + K+ A A N ++ C K EA +L + MK P ++ ++N +
Sbjct: 369 TAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQP-----DVYTYNTL 423
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C G F E+ M + C P ++F L+ CK G EA ++ M + +
Sbjct: 424 LSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARI 483
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+ Y L+D + VD F +M + + N+ YN L+ L M ++A
Sbjct: 484 QPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFE 543
Query: 251 FFDIM 255
D M
Sbjct: 544 LMDRM 548
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 6/183 (3%)
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+PD FN+L+ L + G L EL+ M D V PD TYG+L++ + V D
Sbjct: 128 APDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALK 187
Query: 216 YFRKMVDSG--LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK---MDDASYKFMM 270
+M G + P++A+ N +V L ++G L +A F D ++ + + +Y +
Sbjct: 188 VLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLA 247
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKA 330
A G + +IV ++ G+ + + G L + GR ++ +K
Sbjct: 248 DAFCRVGDIGMACKIVAR-MEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWP 306
Query: 331 EAK 333
EA+
Sbjct: 307 EAR 309
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A ++ FN + G + E+F M + PD +++ L++ LCK+G + +A +
Sbjct: 128 APDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALK 187
Query: 181 LYGEMSDKG--VNPDEYTYGLLMDACFEVNRVDDGATYF--RKMVDSGLRPNLAVYNRLV 236
+ MS G V PD ++D ++ R+ + R G PN YN L
Sbjct: 188 VLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLA 247
Query: 237 GKLVQVG 243
+VG
Sbjct: 248 DAFCRVG 254
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 145/307 (47%), Gaps = 15/307 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY+Y L+ GF R G + ++F E+++ GV + VV+ +L+ + +G M
Sbjct: 253 PDVYTYGALIKGFCRTGRMENAVKMFNEMRDT--GVNPNAVVFTTLIDAHCKEGNVNAGM 310
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ Y + V VA N++++ LC A + + MKN P ++ ++
Sbjct: 311 DLYQDM--RVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKV-----TY 363
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ DG C G+ A+++ +KM E S D +++ LI L K G +AE + EM +
Sbjct: 364 TTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMME 423
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+ PD TY +++DA V G ++M + G +P + YN ++ L ++G +
Sbjct: 424 AALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKN 483
Query: 248 AKSFFDIMVK-KLKMDDASYKFMMKALSDGGKL--DEILEIVGGILDDGGIEFSEELQEF 304
A M+ + DD +Y ++ GK+ E LE G++ D + ++ + E
Sbjct: 484 ADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESSKGMVPDFAV-YTSLISEL 542
Query: 305 VKGELSK 311
K + +K
Sbjct: 543 AKKKPAK 549
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 112/239 (46%), Gaps = 9/239 (3%)
Query: 41 GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF 100
G+ + ++ LM+ + G A + ++E SV+ + V N+++ +C
Sbjct: 180 AGMAPETRLFNVLMRDFVRLGELVSARKVFDEM---RRSVQPTVVTFNTLISGMCRARDL 236
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
D L+ M + P ++ ++ + G+C GR ++A+++F +M + +P+ +
Sbjct: 237 DAVDGLYKEMSDVGVKP-----DVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAV 291
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
F LID CK G + +LY +M +GV PD Y L++ + + +M
Sbjct: 292 VFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEM 351
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGK 278
++GL+P+ Y L+ + G LD A M K++ +D+ +Y ++ LS G+
Sbjct: 352 KNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGR 410
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G +DG D + +++ EK V D V Y +L+ G G
Sbjct: 355 GLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEK--EVSLDEVTYTALISGLSKAGRPV 412
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E + ++++ V+DA C G KL M+N+ P +
Sbjct: 413 DAERVLREMM--EAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKP-----GV 465
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++NV+ +G C G+ K+A + M SPD +++N L+D CK+G +A +EEL
Sbjct: 466 VTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELE-- 523
Query: 185 MSDKGVNPDEYTYGLLM 201
S KG+ PD Y L+
Sbjct: 524 -SSKGMVPDFAVYTSLI 539
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 15/253 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G + D V Y+ L+ G R + + EE+K G+ D V Y +L+ G
Sbjct: 316 MRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKN--AGLKPDKVTYTTLIDGCCKD 373
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AM+ + V + V +++ L G+ +A ++ M P
Sbjct: 374 GKLDMAMDIKQKMA--EKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDN- 430
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++ D +C +G K ++ ++M P +++N +++ LCK G + A+
Sbjct: 431 ----TTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADM 486
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M + GV+PD+ TY +L+D + +V + G+ P+ AVY L+ +L
Sbjct: 487 LLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESS---KGMVPDFAVYTSLISELA 543
Query: 241 QVGMLDEAKSFFD 253
+ AK++ D
Sbjct: 544 KK---KPAKNYHD 553
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 173 GMLAEAEELYGEMSDKGVN-PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
G+L +A L +G++ P GL+ + + T++ +++D+G+ P +
Sbjct: 133 GLLPDACSLVLLALRRGISLPAPVCSGLMS----RLPSTPEAYTFYLQLLDAGMAPETRL 188
Query: 232 YNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
+N L+ V++G L A+ FD M + ++ ++ ++ + LD + + + D
Sbjct: 189 FNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSD 248
Query: 292 DGGIEFSEELQEFVKGELSKEGREEEVVKL 321
G +KG + GR E VK+
Sbjct: 249 VGVKPDVYTYGALIKG-FCRTGRMENAVKM 277
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 167/371 (45%), Gaps = 28/371 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF+KG + V Y+ L+ G G D L E + + + V YG+L+ G
Sbjct: 283 MFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS--SKCIPNDVTYGTLINGLVK- 339
Query: 61 GMEEEAMECYNEAVG-ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+ AM+ + E +++ + ++ L GK +EA+ L+ +M + P
Sbjct: 340 --QRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRP-- 395
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ ++ + DG C +G+ +A E+ M C P+ ++++L+ K G+ EA
Sbjct: 396 ---NIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAI 452
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+++ EM + G + +E+ Y +L+D V RV + + KM+ G++P+ Y+ ++ L
Sbjct: 453 QVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGL 512
Query: 240 VQVGMLDEAKSFFDIMV----KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG-- 293
+G +D A + M+ K + D +Y ++ L + ++++ +LD G
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCD 572
Query: 294 -----GIEFSEELQEFVKGELSKEGRE--EEVVKLMEKKEREKAEAKAREAEAAE--AAK 344
F L E K + +EGR EE+V + K++R K E + A K
Sbjct: 573 PDVITCNTFLNTLSE--KSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPK 630
Query: 345 RSARAAIASLI 355
S A I I
Sbjct: 631 TSTWAMIVPEI 641
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 146/321 (45%), Gaps = 16/321 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V+ + LGFV D +F + EK + DG Y +LM G + +
Sbjct: 187 GLSFNLVIKALCKLGFV-----DRAIEVFRGMPEK--KCLPDGYTYCTLMDGLCKEERID 239
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ +E E S S V N ++D LC G KL D M + P +
Sbjct: 240 EAVLLLDEMQSEGCSP--SPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEV---- 293
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C +G+ A+ + +M +C P+ +++ LI+ L K + L
Sbjct: 294 -TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLIS 352
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++G +++ Y +L+ F+ + ++ T ++KM + G RPN+ VY+ ++ L + G
Sbjct: 353 MEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGK 412
Query: 245 LDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+EAK + M+ + + +Y +MK G +E ++ V +D+ G +E
Sbjct: 413 PNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQ-VWREMDETGCSRNEFCYS 471
Query: 304 FVKGELSKEGREEEVVKLMEK 324
+ L GR +E + + K
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSK 492
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 16/279 (5%)
Query: 53 LMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN 112
+ + Y + E+A++ ++ V E K S + NSVL+ + N G + L+ +D + N
Sbjct: 118 VFRAYGKAHLPEKAVDLFHRMVDE-FRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVN 176
Query: 113 EHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
N ++ N SFN++ C G AIEVFR M E +C PD ++ L+D LCK
Sbjct: 177 S-NMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKE 235
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
+ EA L EM +G +P Y +L+D + + M G PN Y
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTY 295
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALS------DGGKLDEILEI 285
N L+ L G LD+A S + MV K +D +Y ++ L DG +L +E
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISME- 354
Query: 286 VGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ G ++ + + L KEG+ EE + L +K
Sbjct: 355 ------ERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKK 387
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 156/340 (45%), Gaps = 41/340 (12%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKE------------------KLGGV--------- 43
VVY+ L+ GF+R+G++D F++ +E+ K+G +
Sbjct: 350 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 409
Query: 44 ------VSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNN 97
D + Y +++G+F +++A +E EN+ + + + ++ LC +
Sbjct: 410 MVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM--ENAGISPNVYTYSIMIHGLCQS 467
Query: 98 GKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
G+ ++A L + M K L N + + GYC +G A E+F KM + P
Sbjct: 468 GEPEKASDLLEEMTT-----KGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 522
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
D +N+LI L K G + E+ + + +M ++G+ P+E+TY L+ + ++
Sbjct: 523 DLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV 582
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDG 276
++M+D+GL+PN +Y L+ + +++ S F M+ + + +D+ Y ++ LS
Sbjct: 583 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 642
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
G ++ ++ GI +G + + G RE+
Sbjct: 643 GNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREK 682
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 159/333 (47%), Gaps = 10/333 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + + YS L+ G++++GD + +L + + + G+ + V+Y L++ YF
Sbjct: 553 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDT--GLKPNDVIYIDLLESYFKSDDI 610
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+ + + + V + ++ L ++G + A ++ ++ + P +
Sbjct: 611 EKVSSTFKSMLDQG--VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVP-----D 663
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + G C + A + +M + P+ + +N LID LCK+G ++ A ++
Sbjct: 664 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 723
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ KG+ P+ TY L+D +V + + + +M+ +G+ P+ VY+ L G
Sbjct: 724 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 783
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L++A + M + +S+ ++ GK+ E L+++ I+ G + + ++
Sbjct: 784 DLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 843
Query: 304 FVKGELSKEGREEEVVKLMEKKEREKAEAKARE 336
+ G LS+ G+ EV + + +++ +E+ AR
Sbjct: 844 IISG-LSEAGKLSEVHTIFVELQQKTSESAARH 875
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 137/317 (43%), Gaps = 11/317 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D YS L+ + + + D ++ E++E+ G+ + V Y L+ G G E
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGL--NTVTYNVLIAGLCRSGAVE 296
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + E+ + ++++ LC + + +EA L D M P N+
Sbjct: 297 EAFGFKKDM--EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKP-----NV 349
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ + DG+ +G +A ++ ++M P+ ++++NL+ LCK G + A L +
Sbjct: 350 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 409
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M PD TY L+++ F + D +M ++G+ PN+ Y+ ++ L Q G
Sbjct: 410 MVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 469
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
++A + M K LK + Y ++ G + EI + +
Sbjct: 470 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNS 529
Query: 304 FVKGELSKEGREEEVVK 320
+ G LSK GR EE K
Sbjct: 530 LIFG-LSKVGRVEESTK 545
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 12/171 (7%)
Query: 93 ALCNNGKFDEALKLFDRMKNEH-NPPKRLAV-----------NLGSFNVMADGYCGQGRF 140
+LC F+ A L +M + +PP LA + +V+ D Y GR
Sbjct: 131 SLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRV 190
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
+DA EV M + +P N L+ L + +A ++ M G++PD YTY L
Sbjct: 191 QDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTL 250
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
++A +V D +M + G N YN L+ L + G ++EA F
Sbjct: 251 IEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 301
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 119/318 (37%), Gaps = 64/318 (20%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ KG V + V Y+ L+ G + GD F L+ E+ G+ D VY L G
Sbjct: 725 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT--GITPDAFVYSVLTTGCSSA 782
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E+AM E + S + N+++D C GK E LKL +
Sbjct: 783 GDLEQAMFLIEEMFLRGHA---SISSFNNLVDGFCKRGKMQETLKLLHVIM--------- 830
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
G+G P+ L+ N+I L + G L+E
Sbjct: 831 ---------------GRGLV----------------PNALTIENIISGLSEAGKLSEVHT 859
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ E+ K + ++ F M++ G P L V + ++
Sbjct: 860 IFVELQQKTSESAARHF----------------SSLFMDMINQGKIP-LDVVDDMIRDHC 902
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G LD+A D++V K M +SY ++ L GKL E L ++ +D GI SE
Sbjct: 903 KEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKE-MDKRGICPSE 961
Query: 300 ELQEFVKGELSKEGREEE 317
+ L G +E
Sbjct: 962 NQCLILLTNLHTSGYIQE 979
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 155/361 (42%), Gaps = 45/361 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMK----- 55
M KG Y+ L+ G++ G V RL EE+ + D +Y L+
Sbjct: 365 MLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTH--DLEPDCFIYALLLDYLCKN 422
Query: 56 -----------GYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV-----LDALCNNGK 99
KG++ +AM +EAV ++ ++ N V +DALC G+
Sbjct: 423 GRCTEARNIFDSVIRKGIKPDAM--IDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGR 480
Query: 100 FDEALKLFDRMKNE------------------HNPPKRLAVNLGSFNVMADGYCGQGRFK 141
D+A+ F++M NE + + +++ FN + C +GR
Sbjct: 481 VDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVM 540
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
+A + M PD +S+N L+D C G EA +L M G+ P+E+TY L+
Sbjct: 541 EAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLL 600
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLK 260
+ R+DD + R+M+ +G P++ YN ++ L Q G EAK + M+ + +
Sbjct: 601 HGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQ 660
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
D +Y ++ L +DE ++ + G++ + G L K G++E+ +
Sbjct: 661 WDMYTYNIILNGLCKNNCVDEAFKMFQSLCSK-GLQLHIITFNIMIGALLKGGKKEDAMD 719
Query: 321 L 321
L
Sbjct: 720 L 720
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 138/288 (47%), Gaps = 16/288 (5%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
+FE L + G+ D VV+ +LM +G EA + V+ ++ N+++
Sbjct: 511 VFEMLDQ---GIRLDVVVFNTLMCDLCREGRVMEAQRLIELML--RVGVRPDVISYNTLV 565
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
D C G+ DEA KL D M + P N ++N + GYC R DA + R+M
Sbjct: 566 DGHCLTGRTDEAAKLLDVMVSIGLKP-----NEFTYNTLLHGYCKARRIDDAYSLLREML 620
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+PD +++N ++ L + G +EA+ELY M + D YTY ++++ + N VD
Sbjct: 621 MNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVD 680
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMM 270
+ F+ + GL+ ++ +N ++G L++ G ++A F I L D +Y +
Sbjct: 681 EAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIA 740
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV-----KGELSKEG 313
+ L G L+E+ + + ++G S L V +G++S+ G
Sbjct: 741 ENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAG 788
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 153/330 (46%), Gaps = 29/330 (8%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D YS L+ F R G + F +F L K G V + +V+ L+KG +EA
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFG-LILKTGWRV-NHIVFNQLLKGLCDAKRLDEAT 250
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN---PPKRLAVNL 124
+ E + V+ N+++ CN + +EAL+L M ++ PP ++
Sbjct: 251 NILLWRMPEFGCTP-NVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPP-----DV 304
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S+N + +G+ +G+ A +F +M + PD +++N +ID LCK ++ A+ ++ +
Sbjct: 305 VSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQ 364
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M DKGV P TY L+ + + +M L P+ +Y L+ L + G
Sbjct: 365 MLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGR 424
Query: 245 LDEAKSFFDIMVKKLKMDDASY--------KFMMKALSD-----GGKLDEILEIVGGILD 291
EA++ FD +++K DA K + LS G +D + ++ G +D
Sbjct: 425 CTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKL--GRVD 482
Query: 292 DGGIEFSEELQEFVKGELSKEGRE--EEVV 319
D ++F++ + E V G + E E EE+V
Sbjct: 483 DAILKFNQMINE-VYGLCTVEKWEKAEELV 511
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 127/282 (45%), Gaps = 9/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + Y+ L+ G G +D +L + + G+ + Y +L+ GY
Sbjct: 549 MLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSI--GLKPNEFTYNTLLHGYCKA 606
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A E + + + V N++L L G+F EA +L+ M N R
Sbjct: 607 RRIDDAYSLLREMLMNGPTPDV--VTYNTILHGLFQTGRFSEAKELYLNMINS-----RT 659
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N++ +G C +A ++F+ + ++FN +I L K G +A +
Sbjct: 660 QWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMD 719
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ +S G+ PD TY L+ + + +++ F M ++G PN + N LV + +
Sbjct: 720 LFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFL 779
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
G + A ++ + +K +AS M+ +L G+ ++
Sbjct: 780 HRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQL 821
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCK-NGMLAEAEELYG---------EMSDKGV 190
DA+++F + + +FN+L+ + + +G + E G E SDK V
Sbjct: 133 HDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDK-V 191
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
PD TY +L+ + R++ G F ++ +G R N V+N+L+ L LDEA +
Sbjct: 192 APDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATN 251
Query: 251 FFDIMVKKL--KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
+ + + SY ++K + + +E LE++ + DD G+ ++ +
Sbjct: 252 ILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSY 307
>gi|115436834|ref|NP_001043148.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|56201661|dbj|BAD73125.1| leaf protein -like [Oryza sativa Japonica Group]
gi|113532679|dbj|BAF05062.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|215717162|dbj|BAG95525.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 541
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 10/275 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ L+ G+ R G D V +L+ E++ L GV V YG+L++G +K ++A+ +E
Sbjct: 186 YNILLHGWSRAGRLDKVGKLWAEMR--LAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDE 243
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
E ++ + + N ++ AL G+F +A K+ ++ P +A N+ +FN +
Sbjct: 244 MREEG--IEANLLTCNPIVYALAQAGRFQDAHKVLEKF-----PLYGVAPNISTFNSLVM 296
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
GYC G A V + M E SP T ++N KN + Y +M G +P
Sbjct: 297 GYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSP 356
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
D+ TY LL+ NR++ ++M G P+LA L+ L + +EA + F
Sbjct: 357 DQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEF 416
Query: 253 DIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+ M K+ + +Y+ +M+ L G + I ++
Sbjct: 417 EDMFKRGIVPQYITYQKLMRELKRLGLVHLIQKLT 451
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 107/241 (44%), Gaps = 13/241 (5%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEH--NPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
N +DALC G A++LF+R + E +PP A +N++ G+ GR +
Sbjct: 150 NMAVDALCKEGHPRAAVELFERWRREEPDSPPDERA-----YNILLHGWSRAGRLDKVGK 204
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
++ +M P +++ LI+ LC +A L EM ++G+ + T ++ A
Sbjct: 205 LWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALA 264
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDA 264
+ R D K G+ PN++ +N LV + G L A S +M ++ +
Sbjct: 265 QAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTR 324
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV--KGELSKEGREEEVVKLM 322
+Y + + ++ + ++ +G +S + +V LS+ R E VV+++
Sbjct: 325 TYNYFFMTFAKNSDVESGMNFYSKMIGNG---YSPDQLTYVLLVKMLSRANRLELVVQMI 381
Query: 323 E 323
+
Sbjct: 382 Q 382
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 77/207 (37%), Gaps = 28/207 (13%)
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ + + A+ GE ++V + L + G F A +L + PP
Sbjct: 56 LPTVPDSALPALARWAGEATAVSL-----------LTSRGLFAAAWRLL--LAPSPTPPP 102
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVF----RKMGEYRCS---PDTLSFNNL-IDQLC 170
L +F + Y GR A+ F R Y P S N+ +D LC
Sbjct: 103 -----LAAFAPLVRRYARLGRAPAALRAFQFLRRHPDRYMAGGDIPAAASLLNMAVDALC 157
Query: 171 KNGMLAEAEELY--GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
K G A EL+ + PDE Y +L+ R+D + +M +G+RP
Sbjct: 158 KEGHPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAEMRLAGVRPT 217
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+ Y L+ L D+A + D M
Sbjct: 218 VVTYGTLIEGLCVKRRPDQAIALLDEM 244
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 114/239 (47%), Gaps = 8/239 (3%)
Query: 88 NSVLDALCNNGKFDEALKLF-DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N VL A+C+ G DEA++L D + + P ++ S+N + G C R+ ++
Sbjct: 185 NLVLQAVCDQGPVDEAVRLLRDLLPSFGCEP-----DVVSYNAVLRGLCMARRWGHVQDL 239
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
+M C P+ ++F+ LI LC+NG+ E++ +M++ G PD Y ++D +
Sbjct: 240 MEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCK 299
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDAS 265
R++ +M GL PN+ YN L+ L +EA+ M K +DD +
Sbjct: 300 EERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVT 359
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ ++ L G +D ++E++ +L+ G + + G KEG +E V L+
Sbjct: 360 FNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVING-FCKEGLIDEAVMLLRS 417
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 7/239 (2%)
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
+ +V++ C G DEA+ L M P N S+ ++ G C R+ DA
Sbjct: 393 ITYTTVINGFCKEGLIDEAVMLLRSMAACGCRP-----NTVSYTIVLKGLCSAERWVDAE 447
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
E+ +M + C P+ ++FN LI+ LCK G++ +A EL +M G +PD +Y ++D
Sbjct: 448 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 507
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDD 263
+ D+ MV G+ PN +Y+ + L G +++ F +I ++ D
Sbjct: 508 GKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDA 567
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
Y ++ +L G+ D +E + ++ G + ++G L+ EG +E +++
Sbjct: 568 VLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRG-LASEGFVKEAQEIL 625
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 153/373 (41%), Gaps = 52/373 (13%)
Query: 2 FVKGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
+ F +P V SY ++ G V L EE+ G + V + +L+
Sbjct: 207 LLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVA--AGCPPNIVTFSTLIGHLCR 264
Query: 60 KGMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G+ E E + + G V+M A +++D +C + + A + +RM P
Sbjct: 265 NGLFERVHEVHAQMAEHGCAPDVRMYA----TIIDGVCKEERLEVARGILNRM-----PS 315
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
L+ N+ +N + G C R+++A + +M + C D ++FN L+D LC+NG++
Sbjct: 316 YGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDR 375
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY----- 232
E+ +M + G PD TY +++ + +D+ R M G RPN Y
Sbjct: 376 VIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLK 435
Query: 233 ------------------------------NRLVGKLVQVGMLDEAKSFF-DIMVKKLKM 261
N L+ L + G++++A ++V
Sbjct: 436 GLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 495
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
D SY ++ L G DE LE++ ++ G+ + + + LS EGR +V+++
Sbjct: 496 DLISYSTVIDGLGKAGNTDEALELL-NVMVKKGMSPNTIIYSSIASALSGEGRINKVIQM 554
Query: 322 MEKKEREKAEAKA 334
E + + A
Sbjct: 555 FENIQDTTVRSDA 567
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 130/306 (42%), Gaps = 48/306 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF K D V ++ L+ ++G D V + E++ E G + D + Y +++ G+ +
Sbjct: 348 MFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEH--GCMPDVITYTTVINGFCKE 405
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G+ +EA+ + + V+ VL LC+ ++ +A +L +M + PP
Sbjct: 406 GLIDEAVMLLRSMAA--CGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPP--- 460
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +FN + + C +G + AIE+ ++M CSPD +S++ +ID L K G EA E
Sbjct: 461 --NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALE 518
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACF---EVNRV--------------------------- 210
L M KG++P+ Y + A +N+V
Sbjct: 519 LLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLC 578
Query: 211 -----DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS 265
D + MV SG PN + Y L+ L G + EA+ + K A
Sbjct: 579 KRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSK----GAL 634
Query: 266 YKFMMK 271
K +MK
Sbjct: 635 RKHLMK 640
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 75/208 (36%), Gaps = 39/208 (18%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFN---------------- 163
+A N ++ + C +GR DA+ V M C+P ++
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166
Query: 164 ------------------NLIDQ-LCKNGMLAEAEELYGEMSDK-GVNPDEYTYGLLMDA 203
NL+ Q +C G + EA L ++ G PD +Y ++
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD 263
R +MV +G PN+ ++ L+G L + G+ + M + D
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILD 291
M + DG +E LE+ GIL+
Sbjct: 287 VR---MYATIIDGVCKEERLEVARGILN 311
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 151/329 (45%), Gaps = 11/329 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V Y+ ++LG + GD D +F E+ EK G+ + + Y LM GYF K
Sbjct: 459 MVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEK--GLKPNLITYSVLMDGYFKK 516
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A Y+ GEN + S N +++ LC G+ E+ ++ E P +
Sbjct: 517 GDTEYAFGLYDRMRGEN--IAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCM 574
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + DG+ +G A+ V+ +M + SP+ ++ NLI+ CK+ + A +
Sbjct: 575 -----TYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALK 629
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EM +KG+ D Y L+D + + + ++ + GL PN VY+ ++
Sbjct: 630 VMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFR 689
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
++ ++ A M+ + + D Y ++ L GKL E+ +L G +
Sbjct: 690 KLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLI 749
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKERE 328
+ G L +G+ E K++E +R+
Sbjct: 750 TYSVLIHG-LCNKGQLENAQKILEDMDRK 777
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 20/258 (7%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVV-YGSLMKGYFMKGME 63
G + V Y+ ++ ++G+ D + ++ ++K K +S V SL++GY
Sbjct: 359 GICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNK---DISPTVFNVNSLIRGYLKARSP 415
Query: 64 EEAMECYNEAVGENSSVKMSAVAN----NSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
EEA + ++EAV +AN NS+L LC GK EA ++++M + P
Sbjct: 416 EEASKLFDEAVA-------CGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRP-- 466
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ S+N M G+C QG A VF +M E P+ ++++ L+D K G A
Sbjct: 467 ---SVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAF 523
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
LY M + + P ++T ++++ + R + +K+V G P YN ++
Sbjct: 524 GLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGF 583
Query: 240 VQVGMLDEAKSFFDIMVK 257
V+ G ++ A + + M K
Sbjct: 584 VKEGSVNSALAVYTEMCK 601
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 116/252 (46%), Gaps = 20/252 (7%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
VV + LM G+ + GD D LF+++ E G+ + V Y +++ G ++A E Y
Sbjct: 330 VVATTLMKGYCKQGDLDSALELFDKMNE--NGICPNNVTYAVIIEWCCKNGNMDKAYEIY 387
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-----NLG 125
N+ +N + + NS++ +EA KLFD AV N+
Sbjct: 388 NQM--KNKDISPTVFNVNSLIRGYLKARSPEEASKLFDE-----------AVACGIANVF 434
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + C +G+ +A ++ KM P +S+NN+I C+ G + A ++ EM
Sbjct: 435 TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEM 494
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+KG+ P+ TY +LMD F+ + + +M + P+ N ++ L + G
Sbjct: 495 LEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRT 554
Query: 246 DEAKSFFDIMVK 257
E++ +V+
Sbjct: 555 SESQDRLKKLVQ 566
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 135/348 (38%), Gaps = 76/348 (21%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELK----------------------- 37
M KG + + YS LM G+ + GD++ F L++ ++
Sbjct: 494 MLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGR 553
Query: 38 -----EKLGGVVSDGVV-----YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
++L +V +G + Y ++ G+ +G A+ Y E S + N
Sbjct: 554 TSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTN 613
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ C + D ALK+ D MKN K + +++ + + DG+C +G +A ++
Sbjct: 614 --LINGFCKSNNMDLALKVMDEMKN-----KGIELDVTVYCALIDGFCRKGDMVNASQLL 666
Query: 148 RKMGEYRCSP-----------------------------------DTLSFNNLIDQLCKN 172
++ E SP D + LI L K
Sbjct: 667 SELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKE 726
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
G L A ELY EM KG+ PD TY +L+ ++++ M + P + +Y
Sbjct: 727 GKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIY 786
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
N L+ + G L EA + M+ K L DD +Y ++ G L
Sbjct: 787 NTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D VY L+ GF R GD +L EL+E G+ + VVY S++ G+
Sbjct: 637 KGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEV--GLSPNKVVYSSMISGFRKLQNM 694
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A+ + + E + +++ L GK A +L+ M K + +
Sbjct: 695 EAALHLHKRMINEGIPCDLQIYT--TLISGLLKEGKLLFASELYAEML-----AKGIMPD 747
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +++V+ G C +G+ ++A ++ M +P +N LI K G L EA L+
Sbjct: 748 LITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHN 807
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
EM DKG+ PD+ TY +L++ +V DG +
Sbjct: 808 EMLDKGLVPDDTTYDILVNG-----KVKDGNLF 835
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 34/270 (12%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
GV D +++ +G EEA + EA +N V++ A A + V++A+C
Sbjct: 219 GVKGDCATISVMIRASMREGKLEEAEGWFREA--KNKGVELDARAYSIVIEAVCKKPDSV 276
Query: 102 EALKLFDRMKNEHNPPKRL------------------------------AVNLGSFNVMA 131
AL L M+++ P + +N+ +
Sbjct: 277 AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLM 336
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
GYC QG A+E+F KM E P+ +++ +I+ CKNG + +A E+Y +M +K ++
Sbjct: 337 KGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDIS 396
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P + L+ + ++ + F + V G+ N+ YN L+ L + G + EA S
Sbjct: 397 PTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSI 455
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
++ MV+K ++ SY M+ G +D
Sbjct: 456 WEKMVRKGVRPSVVSYNNMILGHCQQGDMD 485
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 36/203 (17%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
FN + + Y R DA++ F + E P N + +L KN M+ EA ++Y +M+
Sbjct: 157 FNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMA 216
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYF----------------------------- 217
KGV D T +++ A ++++ +F
Sbjct: 217 SKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSV 276
Query: 218 ------RKMVDSGLRPNLAVYNRLVGKLVQVG-MLDEAKSFFDIMVKKLKMDDASYKFMM 270
R+M D G P+ ++ R++G ++ G ML+ K +++ M+ +M
Sbjct: 277 AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLM 336
Query: 271 KALSDGGKLDEILEIVGGILDDG 293
K G LD LE+ + ++G
Sbjct: 337 KGYCKQGDLDSALELFDKMNENG 359
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 26/331 (7%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G A YS L+ G + G LF+E+ G+ + V+Y SL+ GY +G
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIAN--GLKPNVVIYTSLISGYCKEGELH 477
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A Y+E G+ + + +++ LC+ + EA KLF M + P +
Sbjct: 478 NAFRLYHEMTGK--GISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV---- 531
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE---- 180
++NV+ +G+C +G A E+ +M E PDT ++ LI LC G ++EA E
Sbjct: 532 -TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590
Query: 181 LYGEMSD----KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
L GE +G P+ TY L++ ++ +D R+M+ S PN Y +
Sbjct: 591 LQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFL 650
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG--- 293
L G +++A D++++ + +Y +++ G++ E E++ ++D G
Sbjct: 651 DYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISP 710
Query: 294 -GIEFSEELQEFVKGELSKEGREEEVVKLME 323
I +S + E+ + G +E +KL E
Sbjct: 711 DCISYSTIIYEY-----CRRGDLKEAIKLWE 736
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 37/282 (13%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+ + V Y+ L+ G ++G++ F L +E+ EK G+V D Y L+ G G EA
Sbjct: 527 IPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEK--GLVPDTYTYRPLISGLCSTGRVSEA 584
Query: 67 MECYNEAVGENSSVK------MSAVANNSVLDALCNNGKFDEALKL-------------- 106
E N+ GE + + V ++++ LC G D+A L
Sbjct: 585 REFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQN 644
Query: 107 -----FDRMKNEHNPPKRLAV----------NLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
D + +E N K + + N ++N++ G+C GR ++A EV M
Sbjct: 645 TYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMI 704
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ SPD +S++ +I + C+ G L EA +L+ M ++GVNPD Y L+ C +
Sbjct: 705 DSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELT 764
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
M+ G++PN A YN L+ + + +F
Sbjct: 765 KAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFS 806
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 126/278 (45%), Gaps = 10/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV S L+ G + G+ F L ++K+ GV VY +L+ G +
Sbjct: 315 GFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK--FGVAPSLFVYNALINSMCKDGKLD 372
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA +N + + + V + ++D+ C GK D AL +M + +
Sbjct: 373 EAESLFNNM--GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTE-----VGIKATV 425
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G+C G+ + A +F +M P+ + + +LI CK G L A LY E
Sbjct: 426 YPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ KG++P+ YT+ L+ NR+ + F +MV+ + PN YN L+ + G
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
A D MV+K L D +Y+ ++ L G++ E
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE 583
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 134/299 (44%), Gaps = 13/299 (4%)
Query: 31 RLFE--ELKEKLG--GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVA 86
R++E E+K L G+ +D Y +L+ G E E NE + +AV+
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N ++D L G A L +++K P +L +N + + C G+ +A +
Sbjct: 325 N--LVDGLRKKGNIGSAFDLVNKVKKFGVAP-----SLFVYNALINSMCKDGKLDEAESL 377
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F MG P+ ++++ LID CK G L A G+M++ G+ Y Y L+ +
Sbjct: 378 FNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCK 437
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDAS 265
+ ++ + F +M+ +GL+PN+ +Y L+ + G L A + M K + + +
Sbjct: 438 LGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYT 497
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ ++ L ++ E ++ G +++ I ++G KEG +L+++
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH-CKEGNTVRAFELLDE 555
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 99/240 (41%), Gaps = 41/240 (17%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
VL+ L +F AL LFD + + P ++ + + C F A EV +
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRP-----DVYVYTAVVRSLCELKDFIRAREVIGR 240
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M C ++N I LCKN + EA E+ +S KG+ D TY L+ +V
Sbjct: 241 MESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEE 300
Query: 210 VDDGATYFRKMVD--------------SGLR---------------------PNLAVYNR 234
+ G +M++ GLR P+L VYN
Sbjct: 301 FEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNA 360
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L+ + + G LDEA+S F+ M K L +D +Y ++ + GKLD L +G + + G
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
+G F+ ++ +RK TL F+ LI +N + + M D G+ P T
Sbjct: 127 EGLFESFLDSYRKCN----FSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRT 182
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
+++ + + F ++V SGLRP++ VY +V L ++ A+ M
Sbjct: 183 LSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRME 242
Query: 257 KK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+ A+Y ++ L ++ E +EI
Sbjct: 243 SSGCDLSVATYNVFIRGLCKNQRVWEAVEI 272
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 145/321 (45%), Gaps = 22/321 (6%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P Y+Y +++G+ G D + L E + K G + V Y ++ KG ++A+
Sbjct: 199 PCAYAYNTMIMGYGSAGKFDEAYSLLERQRAK--GCIPSVVAYNCILTCLGKKGKTDKAL 256
Query: 68 ECYNEAVGENSSVKMSAVAN----NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ E +K A+ N N ++ LC G + A K+ D MK P N
Sbjct: 257 RIFEE-------MKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFP-----N 304
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + N+M D C + +A +F M CSPD +F +LID L K G + +A +Y
Sbjct: 305 VRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYE 364
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M D P+ Y L+ F+ +R +DG +++M+ SG P+L + N + + + G
Sbjct: 365 RMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAG 424
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++ ++ F +I + D SY ++ +L G E E+ + D G + +
Sbjct: 425 ETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYN 484
Query: 303 EFVKGELSKEGREEEVVKLME 323
+ G K G+ + +L+E
Sbjct: 485 TVIDG-FCKSGKVNKAYQLLE 504
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 133/274 (48%), Gaps = 14/274 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF+ D YS L+ V+ G + + L+ +K++ G V D Y +++ G+ G
Sbjct: 439 RGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQ--GCVLDTRAYNTVIDGFCKSGKV 496
Query: 64 EEAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
+A + E +G + +V V SV+D L + DEA LF+ K+ +
Sbjct: 497 NKAYQLLEEMKTMGHHPTV----VTYGSVVDGLAKIDRLDEAYMLFEEAKSNG-----IE 547
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+N ++ + DG+ GR +A V +M + +P+ ++N L+D L K + EA
Sbjct: 548 LNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVC 607
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ M D P++ TY +L++ +V + + ++++M GL+PN Y ++ L +
Sbjct: 608 FQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAK 667
Query: 242 VGMLDEAKSFFDIMVKKLKM-DDASYKFMMKALS 274
G + +A S F+ + D ASY M++ LS
Sbjct: 668 SGNVAQASSLFERFRASGGIPDSASYNAMIEGLS 701
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 136/276 (49%), Gaps = 10/276 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + L+ G + G D +R++E + + + + VVY SL++ +F +E+ +
Sbjct: 339 DGATFCSLIDGLGKQGRVDDAYRIYERMLD--ADQIPNVVVYTSLIRNFFKCDRKEDGHK 396
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
Y E + S + + N+ +D + G+ ++ LF+ +K P + S++
Sbjct: 397 MYKEMMRSGCSPDLMLL--NTYMDCVFKAGETEKGRALFEEIKARGFLP-----DTRSYS 449
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
++ G ++ E++ M + C DT ++N +ID CK+G + +A +L EM
Sbjct: 450 ILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTM 509
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G +P TYG ++D +++R+D+ F + +G+ N +Y+ L+ +VG +DEA
Sbjct: 510 GHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEA 569
Query: 249 KSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
+ M++K L + ++ ++ L +++E L
Sbjct: 570 YLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEAL 605
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 138/288 (47%), Gaps = 11/288 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V D Y+ ++ GF + G + ++L EE+K G V YGS++ G
Sbjct: 474 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTM--GHHPTVVTYGSVVDGLAKIDRL 531
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + EA +++ ++++ V +S++D G+ DEA + + M K L N
Sbjct: 532 DEAYMLFEEA--KSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQ-----KGLTPN 584
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + DG +A+ F+ M + +C+P+ +++ LI+ LCK +A +
Sbjct: 585 VYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQ 644
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV-GKLVQV 242
EM +G+ P+ TY ++ + V ++ F + SG P+ A YN ++ G +
Sbjct: 645 EMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIAN 704
Query: 243 GMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
LD + F + +K + + ++ AL L++ IVG +L
Sbjct: 705 RALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA-AIVGAVL 751
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 145/316 (45%), Gaps = 15/316 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ + + + L+ F R+G D L +E+K +D V+Y + + G +
Sbjct: 91 GYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFD--ADIVLYNVCIDCFGKVGKVD 148
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + ++E + + + V S++ LC + DEA+++F++M+ P A
Sbjct: 149 MAWKFFHEM--KANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYA--- 203
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+N M GY G+F +A + + C P +++N ++ L K G +A ++ E
Sbjct: 204 --YNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEE 261
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M + P+ TY +++ + V+ M ++GL PN+ N ++ +L +
Sbjct: 262 MKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQK 320
Query: 245 LDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE----FSE 299
LDEA S F+ M K D A++ ++ L G++D+ I +LD I ++
Sbjct: 321 LDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTS 380
Query: 300 ELQEFVKGELSKEGRE 315
++ F K + ++G +
Sbjct: 381 LIRNFFKCDRKEDGHK 396
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 6/201 (2%)
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
A +++ AL G+ D L LF++M+ VN+ + + +GR A+
Sbjct: 63 AYTTLIGALSEVGESDRMLALFNQMQELG-----YEVNVHLLTTLIRVFSREGRVDAALS 117
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+ +M D + +N ID K G + A + + EM G+ PD+ TY +M
Sbjct: 118 LLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLC 177
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-A 264
+ NR+D+ F +M + P YN ++ G DEA S + K +
Sbjct: 178 KANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVV 237
Query: 265 SYKFMMKALSDGGKLDEILEI 285
+Y ++ L GK D+ L I
Sbjct: 238 AYNCILTCLGKKGKTDKALRI 258
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 2/189 (1%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+ +A ++ + M ++ P ++ LI L + G L+ +M + G + +
Sbjct: 41 KLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLT 100
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VK 257
L+ RVD + +M + ++ +YN + +VG +D A FF M
Sbjct: 101 TLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKAN 160
Query: 258 KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
L DD +Y MM L +LDE +EI + + + + + G G+ +E
Sbjct: 161 GLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMG-YGSAGKFDE 219
Query: 318 VVKLMEKKE 326
L+E++
Sbjct: 220 AYSLLERQR 228
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 13/115 (11%)
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
E++ GEMS G P YT L+ +C + ++ + + M RP + Y L+G
Sbjct: 11 EQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGA 70
Query: 239 LVQVGMLDEAKSFFDIMVKKLKMDDASYKF-------MMKALSDGGKLDEILEIV 286
L +VG D + F+ +M + Y+ +++ S G++D L ++
Sbjct: 71 LSEVGESDRMLALFN------QMQELGYEVNVHLLTTLIRVFSREGRVDAALSLL 119
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 19/287 (6%)
Query: 15 YLMLGFVRDGDSDGVFR--LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
+LML F+ + V R LF + G V + SL++ Y G+ +E+++ +
Sbjct: 104 FLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQT 163
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ + S + NS+L L G+ A LFD M+ + + + +FN + +
Sbjct: 164 M--KQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYG----VTPDSYTFNTLIN 217
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG--V 190
G+C +A +F+ M Y C+PD +++N +ID LC+ G + A + M K V
Sbjct: 218 GFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDV 277
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+P+ +Y L+ +D+ F M+ GL+PN YN L+ L + DE K
Sbjct: 278 HPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIK- 336
Query: 251 FFDIMV------KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
DI++ D ++ ++KA D G LD +++ +L+
Sbjct: 337 --DILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLN 381
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 133/317 (41%), Gaps = 35/317 (11%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D ++ L+ GF ++ D FR+F+++ +L D V Y +++ G G +
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDM--ELYHCNPDVVTYNTIIDGLCRAGKVK 261
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A + + + + V + V+ +++ C + DEA+ +F M + P N
Sbjct: 262 IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP-----NA 316
Query: 125 GSFNVMADGYCGQGRF----------KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
++N + G R+ DA F +PD +FN LI C G
Sbjct: 317 VTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTF--------APDACTFNILIKAHCDAGH 368
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL-------RP 227
L A +++ EM + ++PD +Y +L+ N D T F ++ + + +P
Sbjct: 369 LDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKP 428
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
A YN + L G +A+ F ++K+ D SYK ++ GK E++
Sbjct: 429 LAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLV 488
Query: 288 GILDDGGIEFSEELQEF 304
+L EF +L+ +
Sbjct: 489 LMLRR---EFVPDLETY 502
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 133/310 (42%), Gaps = 18/310 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ L+ G D + + + D + L+K +
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDA 366
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM--------KN 112
G + AM+ + E + N + + + + ++ LC +FD A LF+ + K+
Sbjct: 367 GHLDAAMKVFQEML--NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKD 424
Query: 113 EHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
E P LA ++N M + C G+ K A +VFR++ + R D S+ LI C+
Sbjct: 425 ECKP---LA---AAYNPMFEYLCANGKTKQAEKVFRQLMK-RGVQDPPSYKTLITGHCRE 477
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
G A EL M + PD TY LL+D ++ ++M+ S P +
Sbjct: 478 GKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTF 537
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
+ ++ +L + +E+ +M+ K+++ + +++ L + ++ IV + D
Sbjct: 538 HSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYD 597
Query: 292 DGGIEFSEEL 301
+G + EEL
Sbjct: 598 NGYLVKMEEL 607
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 107 bits (266), Expect = 1e-20, Method: Composition-based stats.
Identities = 76/282 (26%), Positives = 131/282 (46%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD Y+ + + S + L +++++++ + + V Y +L+ G+ +
Sbjct: 1045 MICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEM--ISPNEVTYNTLINGFVKE 1102
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A + +NE + + V N+++ C+ G F+EAL+L D M+ L
Sbjct: 1103 GKIGVAAQVFNEM--SKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHME-----AAGL 1155
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N ++ + +G C +F+ A + +M +++ LID LCKNGML EA +
Sbjct: 1156 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 1215
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L G M GVNPD TY L++ V + +M SGL N +Y+ L+
Sbjct: 1216 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFC 1275
Query: 241 QVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
Q G + EA + +M D + ++ +L GKL E
Sbjct: 1276 QHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGE 1317
Score = 100 bits (249), Expect = 1e-18, Method: Composition-based stats.
Identities = 75/287 (26%), Positives = 138/287 (48%), Gaps = 12/287 (4%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY+ M+ V+D ++ V+ LF E+ +K G+ + + L+ G ++G ++A
Sbjct: 947 PSVYTCNMILASMVKDKRTELVWSLFREMSDK--GICPNVGTFNILINGLCVEGNLKKAG 1004
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + EN V + V N++L+ C G++ A++L D M K + ++ ++
Sbjct: 1005 NLLKQ-MEENGFVP-TIVTYNTLLNWYCKKGRYKAAIELIDYMIC-----KGIEADVCTY 1057
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
NV D C R A + +KM + SP+ +++N LI+ K G + A +++ EMS
Sbjct: 1058 NVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSK 1117
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
++P+ TY L+ V ++ M +GLR N Y L+ L + +
Sbjct: 1118 FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFEL 1177
Query: 248 AKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
AK + M V + + +Y ++ L G LDE +++VG + DG
Sbjct: 1178 AKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 1224
Score = 89.7 bits (221), Expect = 3e-15, Method: Composition-based stats.
Identities = 71/277 (25%), Positives = 126/277 (45%), Gaps = 9/277 (3%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
V+ L++ Y +GM + A+E + E VG K S N +L ++ + + + LF
Sbjct: 916 VFDLLIRVYLKEGMIDYAVETF-ELVGL-VGFKPSVYTCNMILASMVKDKRTELVWSLFR 973
Query: 109 RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
M + K + N+G+FN++ +G C +G K A + ++M E P +++N L++
Sbjct: 974 EMSD-----KGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 1028
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
CK G A EL M KG+ D TY + +D +R +KM + PN
Sbjct: 1029 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 1088
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVG 287
YN L+ V+ G + A F+ M K L + +Y ++ G +E L ++
Sbjct: 1089 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLD 1148
Query: 288 GILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ G+ +E + L K + E +L+E+
Sbjct: 1149 H-MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLER 1184
Score = 88.6 bits (218), Expect = 6e-15, Method: Composition-based stats.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V + + Y ++ G+ GD F F+++ + G YGSL+KG G
Sbjct: 1329 GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIK--CGQHPSFFTYGSLLKGLCKGGNLV 1386
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + N +V +V N++L C +G EA+ LFD+M + P
Sbjct: 1387 EAKKFLNRLHYIPGAV--DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY---- 1440
Query: 125 GSFNVMADGYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++ + G C +G+ A+ +F MG P+ + + L+D L K G A +
Sbjct: 1441 -TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 1499
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KG PD + ++D+C ++ +F M G+ PNLA YN L+ +
Sbjct: 1500 EMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 1559
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L S + M+++ + D ++ ++ LS G D ++++G ++ +G
Sbjct: 1560 ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEG 1610
Score = 82.8 bits (203), Expect = 3e-13, Method: Composition-based stats.
Identities = 80/342 (23%), Positives = 142/342 (41%), Gaps = 36/342 (10%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G GD + RL + ++ G+ + V YG+L+ G K + E +
Sbjct: 1125 VTYNALIGGHCHVGDFEEALRLLDHMEA--AGLRLNEVTYGTLLNG-LCKHEKFELAKRL 1181
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPP------------ 117
E + N V + +A ++D LC NG DEA++L M K+ NP
Sbjct: 1182 LERMRVNDMV-VGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 1240
Query: 118 -----------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
L +N ++ + +C G +A++V+ M D
Sbjct: 1241 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF 1300
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+ N L+ LC++G L EAE+ MS G+ P+ TY +++ + + ++F M
Sbjct: 1301 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM 1360
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKL 279
+ G P+ Y L+ L + G L EAK F + + +D Y ++ G L
Sbjct: 1361 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 1420
Query: 280 DEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
E + + ++ + + S + G L ++G+ V L
Sbjct: 1421 HEAVALFDKMVQNNVLPDSYTYSSLLTG-LCRKGKAVTAVCL 1461
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 72/326 (22%), Positives = 134/326 (41%), Gaps = 11/326 (3%)
Query: 2 FVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
++ G V D V+Y+ L+ + G+ LF+++ + V+ D Y SL+ G KG
Sbjct: 1397 YIPGAV-DSVMYNTLLAETCKSGNLHEAVALFDKMVQN--NVLPDSYTYSSLLTGLCRKG 1453
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
A+ + A+G + + V ++D L G A F+ M + P +A
Sbjct: 1454 KAVTAVCLFGTAMGRGTLFP-NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVA 1512
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
FN + D +G+ A + F M + P+ ++N L+ K L L
Sbjct: 1513 -----FNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSL 1567
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
Y M +G+ PD+ T+ L+ + D G KM+ G + +N L+ K +
Sbjct: 1568 YSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSE 1627
Query: 242 VGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
G + +A + M + D +Y + L+ E ++ +L++G I +
Sbjct: 1628 SGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQ 1687
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKE 326
+ G + + G + KL ++ E
Sbjct: 1688 YITLING-MCRVGDIQGAFKLKDEME 1712
Score = 60.5 bits (145), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 44/225 (19%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + Y L+ G R GD G F+L +E+ E LG +GS
Sbjct: 1676 MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM-EALG--------FGS-------- 1718
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
VA ++++ L + GK ++A+ + D M RL
Sbjct: 1719 ----------------------HEVAESAMVRGLLHCGKTEDAMLVLDHMLR-----MRL 1751
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +F + +C + +A+++ M D +++N LI +C NG A A E
Sbjct: 1752 LPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFE 1811
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
LY EM + + P+ TY +L+DA N + G + + GL
Sbjct: 1812 LYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1856
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 59/288 (20%), Positives = 115/288 (39%), Gaps = 10/288 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V ++ ++ R G F ++ GV + Y L+ G+ K
Sbjct: 1501 MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR--WWGVCPNLATYNILLHGFSKK 1558
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ Y+ + E + + +S++ L +G D +KL +M E +
Sbjct: 1559 QALLRYLSLYSTMMRE--GIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQF 1616
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+FN++ + Y G+ + A ++ M PD ++N++ + L K E+
Sbjct: 1617 -----TFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTV 1671
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EM + GV P Y L++ V + +M G + + +V L+
Sbjct: 1672 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 1731
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVG 287
G ++A D M++ +L A++ +M K+ E L++ G
Sbjct: 1732 HCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKG 1779
Score = 43.5 bits (101), Expect = 0.19, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 47/101 (46%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C+ F+ LI K GM+ A E + + G P YT +++ + + R +
Sbjct: 910 CNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 969
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+ FR+M D G+ PN+ +N L+ L G L +A + M
Sbjct: 970 SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQM 1010
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 169/362 (46%), Gaps = 34/362 (9%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V ++ + ++ + V R +EL E + G D V Y +L+K Y G
Sbjct: 375 GVKPNQVTHNISLKWLCKEEKREEVTRKVKELVE-MHGFSPDIVTYHTLIKAYLKVGDLS 433
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+E E +G+ +KM+ + N++LDALC K DEA L D + V+
Sbjct: 434 GALEMMRE-MGQKG-IKMNTITLNTILDALCKERKVDEAHNLLDSAHK-----RGYIVDE 486
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + GY + + + A E++ +M + +P +FN+LI LC +G A E + E
Sbjct: 487 VTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 185 MSDKGVNPDEYTY-GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+++ G+ PD+ T+ +++ C E RV+ ++ + + +P+ N L+ L + G
Sbjct: 547 LAESGLLPDDCTFNSIILGYCKE-GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG 605
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILE------------------- 284
M ++A +FF+ ++ + ++D +Y M+ A KL E +
Sbjct: 606 MTEKALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNS 665
Query: 285 IVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAK 344
I+ +++DG + ++EL + G+ R L + E+ A ++++E EA
Sbjct: 666 IITSLMEDGKLSEADELLKKFSGKFGSMKR-----NLHLETEKNPATSESKEELKTEAIA 720
Query: 345 RS 346
S
Sbjct: 721 YS 722
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 139/319 (43%), Gaps = 18/319 (5%)
Query: 16 LMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAV 74
L++G VR S + E + + GV D + L+ GY ++G E+A+ V
Sbjct: 172 LLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMV 231
Query: 75 GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGY 134
E +V V N++L A+ G+ + L MK P R+ ++N + GY
Sbjct: 232 SE-FNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRV-----TYNNLVYGY 285
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G K+A ++ M + PD ++N LI+ +C G + E EL M + PD
Sbjct: 286 CKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDV 345
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
TY L+D CFE+ + +M + G++PN +N + L + +E +
Sbjct: 346 VTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCK----EEKREEVTR 401
Query: 255 MVKKL------KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGE 308
VK+L D +Y ++KA G L LE++ + GI+ + +
Sbjct: 402 KVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE-MGQKGIKMNTITLNTILDA 460
Query: 309 LSKEGREEEVVKLMEKKER 327
L KE + +E L++ +
Sbjct: 461 LCKERKVDEAHNLLDSAHK 479
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 41/218 (18%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELK-------------------------- 37
+G++ D V Y L++G+ R+ + F +++E+K
Sbjct: 480 RGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTEL 539
Query: 38 --EKL-----GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
EK G++ D + S++ GY +G E+A E YNE++ S K N +
Sbjct: 540 AMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKH--SFKPDNYTCNIL 597
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
L+ LC G ++AL F+ + E V+ ++N M +C + K+A ++ +M
Sbjct: 598 LNGLCKEGMTEKALNFFNTLITERE------VDTVTYNTMISAFCKDKKLKEAYDLLSEM 651
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
E R PD ++N++I L ++G L+EA+EL + S K
Sbjct: 652 EEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGK 689
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 47/229 (20%)
Query: 101 DEALKLFDRM--KNEH-NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
D +L L + + N H +PP A+ F++ Y G+ A++VF+KM + P
Sbjct: 109 DASLSLCNSLLHPNLHLSPPPSKAL----FDIALSAYLHAGKPHVALQVFQKMIRLKLKP 164
Query: 158 DTL--------------------------------------SFNNLIDQLCKNGMLAEAE 179
+ L +FN L++ C G L +A
Sbjct: 165 NLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDAL 224
Query: 180 ELYGEM-SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ M S+ VNPD TY ++ A + R+ D M +GL PN YN LV
Sbjct: 225 GMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYG 284
Query: 239 LVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIV 286
++G L EA ++M + + D +Y ++ + + G + E LE++
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELM 333
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 136/307 (44%), Gaps = 49/307 (15%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGEN------ 77
G + VF E K G +S V+ +LM Y G +A++C+ N
Sbjct: 143 GSASSVFASILETK----GTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFN 198
Query: 78 -------SSVKMSA--------------------VANNSVLDALCNNGKFDEALKLFDRM 110
+KMS+ N +++ LC GK +A +FD +
Sbjct: 199 GCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEI 258
Query: 111 KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLC 170
+ P + SFN + +GYC G ++ + M E+R PD +++ LID LC
Sbjct: 259 RKTGLQPTAV-----SFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLC 313
Query: 171 KNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
K L +A L+ EM D+G+ P++ T+ L++ + RVD +++M GL+ +L
Sbjct: 314 KECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLV 373
Query: 231 VYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG----GKLDEILEIV 286
+YN L+ L + G EA+ F M K+ + D KF L DG G L+ LE+
Sbjct: 374 LYNTLIDGLCKGGYFREARKFVGEMTKRGLIPD---KFTYTTLLDGSCKEGDLELALEMR 430
Query: 287 GGILDDG 293
++ +G
Sbjct: 431 KEMVKEG 437
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 10/273 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D YS L+ G ++ + LF+E+ ++ G+V + V + +L+ G G + A+
Sbjct: 300 PDVFTYSALIDGLCKECQLEDANHLFKEMCDR--GLVPNDVTFTTLINGQCKNGRVDLAL 357
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E Y + + +K V N+++D LC G F EA K M P + ++
Sbjct: 358 EIYQQMFTK--GLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKF-----TY 410
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ DG C +G + A+E+ ++M + D ++F +I LC++G + +AE EM
Sbjct: 411 TTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLR 470
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G+ PD+ TY ++MD + V G ++M G P + YN L+ L + G +
Sbjct: 471 AGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKN 530
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
A + M+ + DD +Y +++ GKL
Sbjct: 531 ADMLLNAMLNLGVVPDDITYNILLQGHCKHGKL 563
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 139/289 (48%), Gaps = 12/289 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY++ LM ++G +F+E+++ G+ V + +L+ GY G EE
Sbjct: 230 PNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKT--GLQPTAVSFNTLINGYCKSGNLEEGF 287
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ V E V ++++D LC + ++A LF M + + L N +F
Sbjct: 288 RL--KMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCD-----RGLVPNDVTF 340
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ +G C GR A+E++++M D + +N LID LCK G EA + GEM+
Sbjct: 341 TTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTK 400
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG-MLD 246
+G+ PD++TY L+D + ++ ++MV G++ + + ++ L + G ++D
Sbjct: 401 RGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVD 460
Query: 247 EAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
++ +++ LK DD +Y +M G + +++ + DG I
Sbjct: 461 AERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHI 509
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 12/239 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF KG AD V+Y+ L+ G + G + E+ ++ G++ D Y +L+ G +
Sbjct: 363 MFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKR--GLIPDKFTYTTLLDGSCKE 420
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A+E E V E +++ VA +++ LC +GK +A + M P
Sbjct: 421 GDLELALEMRKEMVKE--GIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDD- 477
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
G++ ++ DG+C +G K ++ ++M P +++N L++ LCK G + A+
Sbjct: 478 ----GTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADM 533
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L M + GV PD+ TY +L+ + ++ D +M GL + A Y L+ +L
Sbjct: 534 LLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM---GLVSDYASYRSLLHEL 589
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 137/300 (45%), Gaps = 9/300 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y+ L+ G+ + GD D +F LK++ G + V + +L+ +A+
Sbjct: 10 DVVAYNTLIAGYCKAGDGDRALDMFRRLKQE-GSCKPNAVSFDTLVIFLCKMSRATDALA 68
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ E +G ++ N+++ C G +A +L H +++ +++
Sbjct: 69 VFQEMLGAGLQADVNVC--NTLIHCTCRLGMLRQARRLL-----HHMTAHAFVLDVFTYS 121
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ D GR A+EVF M + C PDT+ +N LI L K G + EA EL +M+ K
Sbjct: 122 YLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK 181
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ PD TY +++D R + ++F M P++ YN L+ L ++ DEA
Sbjct: 182 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEA 241
Query: 249 KSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
FD M K D ++ ++ L+ G++++ LE ++ G + S + G
Sbjct: 242 CDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISG 301
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 13/305 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M FV D YSYLM + G + +F +++ G + D VVY L+ +
Sbjct: 108 MTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQK--AGCMPDTVVYNVLISCLGKQ 165
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA+E + + N V+D L + G++++A F MK + P
Sbjct: 166 GKVDEALELLEDM--NRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSP--- 220
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N + +G R +A ++F +M +C PD +F LID L K G + +A E
Sbjct: 221 --DVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALE 278
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ G P+ Y Y L+ +VD G F+ M++ P+ Y LV
Sbjct: 279 QSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFS 338
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G A MV++ A+Y ++++LS G++++ + ++ G F+
Sbjct: 339 RRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKG---FNP 395
Query: 300 ELQEF 304
++Q +
Sbjct: 396 DMQTY 400
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 137/319 (42%), Gaps = 16/319 (5%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
V + +++ LG +R RL + V D Y LM G +A
Sbjct: 84 VCNTLIHCTCRLGMLRQAR-----RLLHHMTAH--AFVLDVFTYSYLMDALGKAGRAAKA 136
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+E ++ + + V N ++ L GK DEAL+L + M + P + +
Sbjct: 137 LEVFSNM--QKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMP-----DCRT 189
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N++ D GR++ A F M + SPD +++N L++ L K EA +L+ EM
Sbjct: 190 YNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQ 249
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
PD T+G L+D + R++D ++V G PN +YN L+ + G +D
Sbjct: 250 ANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVD 309
Query: 247 EAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
+ F M++ D+ +Y ++ S G +E++ ++ +G +
Sbjct: 310 KGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLI 369
Query: 306 KGELSKEGREEEVVKLMEK 324
+ LS G+ E+ L ++
Sbjct: 370 R-SLSMAGQVEDAYTLFKE 387
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 84/204 (41%), Gaps = 37/204 (18%)
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDTLSF----------------- 162
A ++ ++N + GYC G A+++FR++ E C P+ +SF
Sbjct: 8 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 67
Query: 163 ------------------NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
N LI C+ GML +A L M+ D +TY LMDA
Sbjct: 68 AVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDAL 127
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA 264
+ R F M +G P+ VYN L+ L + G +DEA + M +K M D
Sbjct: 128 GKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDC 187
Query: 265 -SYKFMMKALSDGGKLDEILEIVG 287
+Y ++ LS G+ ++ G
Sbjct: 188 RTYNIVIDVLSSCGRYEKAYSFFG 211
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VNPDEYTYGLLMDACFEVNRVDDG 213
C+PD +++N LI CK G A +++ + +G P+ ++ L+ +++R D
Sbjct: 7 CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKA 272
F++M+ +GL+ ++ V N L+ ++GML +A+ M +D +Y ++M A
Sbjct: 67 LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126
Query: 273 LSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
L G+ + LE+ + G + + + L K+G+ +E ++L+E R+
Sbjct: 127 LGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISC-LGKQGKVDEALELLEDMNRKGIMP 185
Query: 333 KAR 335
R
Sbjct: 186 DCR 188
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 12/321 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ L+ G+ + D ++ ++E+ +V D YG L+ GY G
Sbjct: 290 KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE-AALVPDERAYGVLIDGYCRTGKI 348
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+ +E + +K + NS+++ C G+ EA + RM + + P
Sbjct: 349 DDAVRLLDEML--RLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSY--- 403
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N + DGYC +G +A + KM + P L++N L+ LC+ G +A +++
Sbjct: 404 --SYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 461
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +GV PDE Y L+D F++ + +T ++ ++ G + +N ++ L ++G
Sbjct: 462 LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMG 521
Query: 244 MLDEAKSFFDIMVKKL--KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
+ EA+ FD M K L D +Y+ ++ + + + V G ++ I S E+
Sbjct: 522 KMVEAEEIFDKM-KDLGCSPDGITYRTLIDGYCKASNVGQAFK-VKGAMEREPISPSIEM 579
Query: 302 QEFVKGELSKEGREEEVVKLM 322
+ L K R EV L+
Sbjct: 580 YNSLISGLFKSRRLVEVTDLL 600
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 146/303 (48%), Gaps = 15/303 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P YSY L+ G+ R+G + F L +++ ++ G+ + Y +L+KG G ++A+
Sbjct: 400 PDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE--GIEPTVLTYNTLLKGLCRVGAFDDAL 457
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ ++ + V V +++LD L F+ A L+ + R+ +F
Sbjct: 458 QIWHLMM--KRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI-----TF 510
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N M G C G+ +A E+F KM + CSPD +++ LID CK + +A ++ G M
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+ ++P Y L+ F+ R+ + +M GL PN+ Y L+ + GMLD+
Sbjct: 571 EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630
Query: 248 A-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A S+F++ L + M+ L G++DE ++ ++D G F + + F+K
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG---FFPDHECFLK 687
Query: 307 GEL 309
++
Sbjct: 688 SDI 690
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 15/277 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSD---GVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M G V D + S ++ F +DG D G + E L GV + V Y SL+ GY
Sbjct: 217 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENL-----GVEPNIVTYHSLINGY 271
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G + EA + + + E V + V ++ C K DEA K+ M+ E
Sbjct: 272 VSLG-DVEAAKGVLKFMSE-KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE---- 325
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
L + ++ V+ DGYC G+ DA+ + +M + N+LI+ CK G + E
Sbjct: 326 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 385
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
AE + M D + PD Y+Y L+D + KM+ G+ P + YN L+
Sbjct: 386 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 445
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
L +VG D+A + +M+K+ + D+ Y ++ L
Sbjct: 446 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 482
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 128/287 (44%), Gaps = 37/287 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G + V Y L+ G+ ++G D F + E+ E G+ ++ ++ +++ G +
Sbjct: 603 MGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTE--NGLSANIIICSTMVSGLYRL 660
Query: 61 GMEEEA---------------MECYNE-----------AVGENSSVKMSAVANNSVLD-- 92
G +EA EC+ + A + S K + NN V +
Sbjct: 661 GRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIA 720
Query: 93 --ALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
LC GK D+A + F + + P ++ + GY G +A + +M
Sbjct: 721 IAGLCKTGKVDDARRFFSMLSLKGFVPDNF-----TYCTLIHGYSAAGNVDEAFRLRDEM 775
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
P+ +++N LI+ LCK+ + A+ L+ ++ KG+ P+ TY L+D ++ +
Sbjct: 776 LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNM 835
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
D KM++ G+ P++ Y+ L+ L + G ++ + + M+K
Sbjct: 836 DAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIK 882
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 105/202 (51%), Gaps = 1/202 (0%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+++ Y +G K+A+ VF MG+ P S N+L++ L KNG A +Y +M
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G+ PD + ++++A + +VD+ A + +KM + G+ PN+ Y+ L+ V +G ++
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
AK M +K + + +Y ++K K+DE +++ G+ ++ + E +
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338
Query: 306 KGELSKEGREEEVVKLMEKKER 327
+ G+ ++ V+L+++ R
Sbjct: 339 IDGYCRTGKIDDAVRLLDEMLR 360
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 45/263 (17%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+ + +VY+ + G + G D R F L L G V D Y +L+ GY
Sbjct: 710 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLS--LKGFVPDNFTYCTLIHGY-------- 759
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
SA N DEA +L D M + L N+
Sbjct: 760 -----------------SAAGN------------VDEAFRLRDEMLR-----RGLVPNIV 785
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + +G C A +F K+ + P+ +++N LID CK G + A +L +M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
++G++P TY L++ + ++ +M+ +G+ L Y LV ++ G +
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEM 905
Query: 246 DEAKSFFDIM-VKKLKMDDASYK 267
+ +D+M ++ L S+K
Sbjct: 906 QKIHKLYDMMHIRCLSTTAISHK 928
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 7/226 (3%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
++E VG S + +L G AL +FD M P +L S N
Sbjct: 142 WDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIP-----SLRSCNS 196
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ + G A V+++M PD + +++ CK+G + EA +M + G
Sbjct: 197 LLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLG 256
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
V P+ TY L++ + V+ + M + G+ N+ Y L+ + +DEA+
Sbjct: 257 VEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAE 316
Query: 250 SFFDIMVKK--LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
M ++ L D+ +Y ++ GK+D+ + ++ +L G
Sbjct: 317 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG 362
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 162/365 (44%), Gaps = 42/365 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE------------------KLG- 41
M G + + VVYS L+ GF+R G++D F++ +E+ KLG
Sbjct: 339 MSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGR 398
Query: 42 --------------GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
G ++D + Y +++G+ + +EEA NE + +
Sbjct: 399 MGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEM--RKGGISPNVYTY 456
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+ +++ LC G+ + A L ++M + P N + + GYC +G F A E
Sbjct: 457 SIIINGLCQIGESERASGLLEQMIADGLKP-----NAFVYAPLISGYCREGSFSLACETL 511
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+KM +PD +N+LI L G + EA E Y EM +KG P+++TYG L+
Sbjct: 512 KKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMA 571
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
++ +M++SGL PN +Y +++ + L++ S M++K L D+ Y
Sbjct: 572 GNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLY 631
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
++ LS G + + ++ I +G + S + G K E+ V L+++
Sbjct: 632 GIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISG-FCKAADMEKAVGLLDEMA 690
Query: 327 REKAE 331
++ E
Sbjct: 691 KKGIE 695
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 2 FVKGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
F++G P VY+Y L+ + + D + ++ EE++E G + V Y +L+ G
Sbjct: 233 FMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRET--GCSLNVVTYNTLIGGLCR 290
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G EEA E E+ + ++++ LC G+ D+A L D M P
Sbjct: 291 AGAIEEAFGYKKEM--EDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMP-- 346
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ ++ + DG+ QG +A ++ ++M P+ ++++NLI LCK G + A
Sbjct: 347 ---NVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRAS 403
Query: 180 E-----------------------------------LYGEMSDKGVNPDEYTYGLLMDAC 204
L EM G++P+ YTY ++++
Sbjct: 404 RILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGL 463
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDD 263
++ + + +M+ GL+PN VY L+ + G A M ++ L D
Sbjct: 464 CQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDL 523
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
Y ++ LS+ GK+DE +E +L+ G
Sbjct: 524 YCYNSLIIGLSNVGKMDEAIEYYDEMLEKG 553
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 1/202 (0%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+++ + + YC + A +V +M E CS + +++N LI LC+ G + EA EM
Sbjct: 245 TYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEM 304
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
D G+ PD +TYG +++ + R D +M +GL PN+ VY+ L+ ++ G
Sbjct: 305 EDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNA 364
Query: 246 DEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
DEA K ++ ++ + +Y +++ L G++ I+ + G + +
Sbjct: 365 DEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLV 424
Query: 305 VKGELSKEGREEEVVKLMEKKE 326
++G L + +EE + L E ++
Sbjct: 425 IEGHLRQHNKEEAFLLLNEMRK 446
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 28/256 (10%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG Y+ L+ GF + D +F + K G+ + V Y +L+ GY G
Sbjct: 692 KGIEPGISCYNALIDGFCKSDDISHARNIFNSIICK--GLPPNCVTYTTLIDGYCKAGDI 749
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNN-GKFDEALKLFDRMKNEHNPPKRLAV 122
+A++ YNE + E + SVL A C+N G +AL + + M R
Sbjct: 750 RDAIDLYNEMLTEGVAPDAFVY---SVLAAGCSNSGDLQQALFITEEMI------ARGYA 800
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ SFN + G+C +G+ ++ ++ M + P L+ N++ L + G L+EA ++
Sbjct: 801 IISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIF 860
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
E+ K + + D ++ F M++ GL P L V + ++ +
Sbjct: 861 VELQQKNASHRD---------------TDHLSSLFTDMINQGLVP-LDVIHNMIQSHCKQ 904
Query: 243 GMLDEAKSFFDIMVKK 258
G LD+A D +V K
Sbjct: 905 GYLDKALMLHDALVAK 920
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 110/250 (44%), Gaps = 7/250 (2%)
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E + + +++++A C + A K+ + M+ ++N+ ++N + G C
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETG-----CSLNVVTYNTLIGGLC 289
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
G ++A ++M +Y PD ++ +I+ LCK G +A+ L EMS G+ P+
Sbjct: 290 RAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVV 349
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
Y L+D D+ ++M +G++PN Y+ L+ L ++G + A M
Sbjct: 350 VYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQM 409
Query: 256 VKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
K M D +Y +++ +E ++ + GGI + + L + G
Sbjct: 410 TKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNE-MRKGGISPNVYTYSIIINGLCQIGE 468
Query: 315 EEEVVKLMEK 324
E L+E+
Sbjct: 469 SERASGLLEQ 478
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/344 (19%), Positives = 141/344 (40%), Gaps = 32/344 (9%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF-- 58
M KGF + Y L+ G+ G+ + +L ++ G+ + +Y +++GYF
Sbjct: 549 MLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNS--GLNPNDFIYAQILEGYFKS 606
Query: 59 ---------MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR 109
+K M E+ + N G V+ L ++G A+ +
Sbjct: 607 DNLEKVSSTLKSMLEKGLMPDNRLYG-------------IVIHNLSSSGHMQAAVSVLSV 653
Query: 110 MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQL 169
++ P L + + G+C + A+ + +M + P +N LID
Sbjct: 654 IEKNGLVPDSLI-----YGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGF 708
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
CK+ ++ A ++ + KG+ P+ TY L+D + + D + +M+ G+ P+
Sbjct: 709 CKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDA 768
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
VY+ L G L +A + M+ + +S+ ++ GKL E ++ + +
Sbjct: 769 FVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVM 828
Query: 290 LDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAK 333
+D + ++ V G L + G+ E + + +++ A +
Sbjct: 829 MDKDIVPSLLTVENIVIG-LGEAGKLSEAHTIFVELQQKNASHR 871
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 29/208 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ KG + V Y+ L+ G+ + GD L+ E+ + GV D VY L G
Sbjct: 724 IICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTE--GVAPDAFVYSVLAAGCSNS 781
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ E + ++ S N+++ C GK E +K M ++ P L
Sbjct: 782 GDLQQALFITEEMIARGYAIISSF---NTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLL 838
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS---PDTLS---------------- 161
V N++ G G+ +A +F ++ + S D LS
Sbjct: 839 TVE----NIVI-GLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDV 893
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+N+I CK G L +A L+ + KG
Sbjct: 894 IHNMIQSHCKQGYLDKALMLHDALVAKG 921
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 134/279 (48%), Gaps = 10/279 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G +D VY+ L+ R G+ F LF+EL EK G++ YG+L+ G G
Sbjct: 304 RGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEK--GLLPSSHTYGALIDGVCKVGEM 361
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A NE ++ V ++ V N++++ C G DEA ++D M+ K +
Sbjct: 362 GAAEILMNEM--QSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEK-----KGFQAD 414
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ + N +A + R+ +A + +M E T+S+ NLID CK G + EA+ L+
Sbjct: 415 VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFV 474
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EMS K V P+ TY +++ A + +V + + M +G+ P+ Y L+
Sbjct: 475 EMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIAD 534
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
+DEA F M +K L + +Y M+ LS GK DE
Sbjct: 535 NVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDE 573
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 40/269 (14%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + Y L+ G + G+ L E++ K GV VV+ +L+ GY KGM
Sbjct: 339 KGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSK--GVNITQVVFNTLINGYCRKGMI 396
Query: 64 EEA------ME----------------CYNEAVGENSS-----------VKMSAVANNSV 90
+EA ME C+N + + V++S V+ ++
Sbjct: 397 DEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNL 456
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+D C G +EA +LF M ++ P N ++NVM YC QG+ K+A +++ M
Sbjct: 457 IDVYCKEGNVEEAKRLFVEMSSKEVQP-----NAITYNVMIYAYCKQGKVKEARKLWANM 511
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
PD+ ++ +LI C + EA L+ EM KG++ + TY +++ + +
Sbjct: 512 KANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKS 571
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
D+ + ++ G + VY L+G +
Sbjct: 572 DEAFGLYDEIKRKGYTIDNKVYTALIGSM 600
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 131/308 (42%), Gaps = 20/308 (6%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+K A N++++A + F K+ MK + + N ++ ++ + G+
Sbjct: 236 IKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDG-----VVYNKVTYTLLIELSVKNGK 290
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
D ++F +M E D + +LI C+ G + A L+ E+++KG+ P +TYG
Sbjct: 291 MNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGA 350
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
L+D +V + +M G+ V+N L+ + GM+DEA +D+M KK
Sbjct: 351 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKG 410
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
+ D + + + + DE + + ++ +GG+ S + KEG EE
Sbjct: 411 FQADVFTCNTIASCFNRLKRYDEAKQWLFRMM-EGGVRLSTVSYTNLIDVYCKEGNVEEA 469
Query: 319 VKL---MEKKEREK--------AEAKAREAEAAEAAKRSARAAIASLIPS--KFGDKVGG 365
+L M KE + A ++ + EA K A + P + + G
Sbjct: 470 KRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHG 529
Query: 366 TEMADNAN 373
+ADN +
Sbjct: 530 ECIADNVD 537
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
V +NG F+E L++FD M K L+++ S V + R +E FR+
Sbjct: 141 VFRVYVDNGMFEEGLRVFDYM-----VKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRR 195
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M + S +++ LC+ G + ++++L E S KG+ P+ YTY +++A +
Sbjct: 196 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRD 255
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+ M G+ N Y L+ V+ G +++ + FD M
Sbjct: 256 FSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEM 301
>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
Length = 556
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 10/266 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ L+ G+ R G D V +L+ E++ L GV V YG+L++G +K ++A+ +E
Sbjct: 186 YNILLHGWSRAGRLDKVGKLWAEMR--LAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDE 243
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
E ++ + + N ++ AL G+F +A K+ ++ P +A N+ +FN +
Sbjct: 244 MREEG--IEANLLTCNPIVYALAQAGRFQDAHKVLEKF-----PLYGVAPNISTFNSLVM 296
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
GYC G A V + M E SP T ++N KN + Y +M G +P
Sbjct: 297 GYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSP 356
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
D+ TY LL+ NR++ ++M G P+LA L+ L + +EA + F
Sbjct: 357 DQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEF 416
Query: 253 DIMVKK-LKMDDASYKFMMKALSDGG 277
+ M K+ + +Y+ +M+ L G
Sbjct: 417 EDMFKRGIVPQYITYQKLMRELKRLG 442
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 107/241 (44%), Gaps = 13/241 (5%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEH--NPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
N +DALC G A++LF+R + E +PP A +N++ G+ GR +
Sbjct: 150 NMAVDALCKEGHPRAAVELFERWRREEPDSPPDERA-----YNILLHGWSRAGRLDKVGK 204
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
++ +M P +++ LI+ LC +A L EM ++G+ + T ++ A
Sbjct: 205 LWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALA 264
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDA 264
+ R D K G+ PN++ +N LV + G L A S +M ++ +
Sbjct: 265 QAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTR 324
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV--KGELSKEGREEEVVKLM 322
+Y + + ++ + ++ +G +S + +V LS+ R E VV+++
Sbjct: 325 TYNYFFMTFAKNSDVESGMNFYSKMIGNG---YSPDQLTYVLLVKMLSRANRLELVVQMI 381
Query: 323 E 323
+
Sbjct: 382 Q 382
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 77/207 (37%), Gaps = 28/207 (13%)
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ + + A+ GE ++V + L + G F A +L + PP
Sbjct: 56 LPTVPDSALPALARWAGEATAVSL-----------LASRGLFAAAWRLL--LAPSPTPPP 102
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVF----RKMGEYRCS---PDTLSFNNL-IDQLC 170
L +F + Y GR A+ F R Y P S N+ +D LC
Sbjct: 103 -----LAAFAPLVRRYARLGRAPAALRAFQFLRRHPDRYMAGGDIPAAASLLNMAVDALC 157
Query: 171 KNGMLAEAEELY--GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
K G A EL+ + PDE Y +L+ R+D + +M +G+RP
Sbjct: 158 KEGHPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAEMRLAGVRPT 217
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+ Y L+ L D+A + D M
Sbjct: 218 VVTYGTLIEGLCVKRRPDQAIALLDEM 244
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 131/282 (46%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D ++ M ++ D + V + + E+ G+ Y +L+K +M G
Sbjct: 387 GHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQ--GMKFGFSTYLALIKALYMAGKVT 444
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E +N+ V + + + + N V+D C D+A F M+ + PP NL
Sbjct: 445 EGNHYFNQMVKD--GLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPP-----NL 497
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN + DGYC G + ++ + E+ PD +F+++ID LC+ + +A + E
Sbjct: 498 VTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSE 557
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G++P+ TY +L+ + + V RKM G+ P++ +N L+ ++G
Sbjct: 558 MVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGK 617
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+++AK F M+ L D+ +Y +K G+ +E E+
Sbjct: 618 VEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKEL 659
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 9/230 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V ++ L+ G+ + G+ L L E G D + S++ G
Sbjct: 488 MQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEH--GFKPDIFTFSSIIDGLCRA 545
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E+A+ C++E V S +AV N ++ +LC G ++KL +M+ + P
Sbjct: 546 KQIEDALGCFSEMVMWGLSP--NAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINP--- 600
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ SFN + +C G+ +DA ++F M PD ++ I C++G EA+E
Sbjct: 601 --DVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKE 658
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
L+ M G PD +T +++DA + ++ + + + G+ N A
Sbjct: 659 LFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGILVNFA 708
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 109/245 (44%), Gaps = 9/245 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + Y+ ++ F + D F+E++ K G+ + V + +L+ GY KG E
Sbjct: 457 GLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYK--GIPPNLVTFNTLIDGY-CKGGEI 513
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ E+ K +S++D LC + ++AL F M P N
Sbjct: 514 CKSRDLLVMLLEHG-FKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSP-----NA 567
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ C G ++++ RKM +PD SFN LI C+ G + +A++L+
Sbjct: 568 VTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSS 627
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G+ PD YTY + + R ++ F M +G P+ N ++ LV+
Sbjct: 628 MLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQ 687
Query: 245 LDEAK 249
+ A+
Sbjct: 688 FEAAQ 692
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 127/289 (43%), Gaps = 16/289 (5%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D Y+ L+ G R G D RL +++ E LG + Y L+ G+F +EA
Sbjct: 251 DRFTYNILIHGVCRSGVVDEALRLVKQM-EGLG-YSPNVFTYTILIDGFFNAKKVDEAFR 308
Query: 69 CYNEAVGENSSVKMSAVAN--NSVLDALCNNGKFDEALKLFDRMKNEHNPP-KRLAVNLG 125
S + + + + V + N F+ A++ +R P +RLA +
Sbjct: 309 VLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIER-----EPVLQRLACD-- 361
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+ + ++A + +K G+ PD+ +FN ++ L K L E +
Sbjct: 362 ---TLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRF 418
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
++G+ TY L+ A + +V +G YF +MV GL N+ YN ++ + M+
Sbjct: 419 VEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMM 478
Query: 246 DEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
D+A + F ++ K + + ++ ++ GG++ + +++ +L+ G
Sbjct: 479 DKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHG 527
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
+P RL +N + D A F++M C PD ++N LI +C++G+
Sbjct: 214 SPSTRL------YNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGV 267
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+ EA L +M G +P+ +TY +L+D F +VD+ M + P+ A
Sbjct: 268 VDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRS 327
Query: 235 LV 236
+
Sbjct: 328 FI 329
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/342 (19%), Positives = 134/342 (39%), Gaps = 43/342 (12%)
Query: 3 VKGFVADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
++G P V++Y +L GF D FR+ E +K + V S + G F
Sbjct: 278 MEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKAR--KVSPSEATIRSFIHGVFRC 335
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A E E + E V + +A +++L L + EA L + + P
Sbjct: 336 VAPNKAFELAIEFI-EREPV-LQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSA 393
Query: 121 AVNLGSFNVMADGY-----CG--------------------------QGRFKDAIEVFRK 149
N+ + N + G+ C G+ + F +
Sbjct: 394 TFNI-AMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQ 452
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M + + S+N +ID CK M+ +A + EM KG+ P+ T+ L+D +
Sbjct: 453 MVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGE 512
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
+ +++ G +P++ ++ ++ L + +++A F MV L + +Y
Sbjct: 513 ICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNI 572
Query: 269 MMKALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVK 306
++ +L G + ++++ + DG F+ +Q F +
Sbjct: 573 LIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCR 614
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L + +GS+ G G ++ D E+F ++ SP T +N +ID L K+ L A
Sbjct: 185 LCILIGSW-----GRLGLAKYCD--EIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAY 237
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ +MS PD +TY +L+ VD+ ++M G PN+ Y L+
Sbjct: 238 LKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGF 297
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYK 267
+DEA + M +K+ +A+ +
Sbjct: 298 FNAKKVDEAFRVLETMKARKVSPSEATIR 326
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 94/242 (38%), Gaps = 41/242 (16%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+V+DAL + D A F +M ++ P R ++N++ G C G +A+ +
Sbjct: 221 NAVIDALVKSNSLDLAYLKFQQMSADNCKPDRF-----TYNILIHGVCRSGVVDEALRLV 275
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
++M SP+ ++ LID + EA + M + V+P E T + F
Sbjct: 276 KQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRC 335
Query: 208 -----------------------------------NRVDDGATYFRKMVDSGLRPNLAVY 232
N + +K G +P+ A +
Sbjct: 336 VAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATF 395
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
N + L++ L+E + D V++ +K ++Y ++KAL GK+ E ++
Sbjct: 396 NIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVK 455
Query: 292 DG 293
DG
Sbjct: 456 DG 457
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 2/208 (0%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+ N+ +FN++ GYC + +FKDA+E MG+Y CSPD +++N ++D LCK G L +A
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDAR 263
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L +M +G+ P+ TY +L+ ++ + + A M + L P++ YN L+ L
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323
Query: 240 VQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
G ++EA D M KL D SY ++ + K+ E +++ + + G++ +
Sbjct: 324 CNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEE-MSEKGVKPN 382
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKE 326
+ KEG+ ++ + K E
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKME 410
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 152/338 (44%), Gaps = 32/338 (9%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V ++ ++ + ++G D +++E G D V Y +L+ GY G
Sbjct: 377 KGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE--SGFSPDCVTYNTLINGYCKAGNM 434
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA +E +N +KM +V N++L LC K +EA KL + + ++
Sbjct: 435 GEAFRTMDEMGRKN--MKMDSVTLNTILRTLCREKKLEEAYKLLSSARK-----RGYFID 487
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+ + GY G A++++ +M E P T+++N +I LC+ G +A
Sbjct: 488 EVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLN 547
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G+ PDE TY ++ V+ + KMV++ +P++ N L+ L G
Sbjct: 548 ELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEG 607
Query: 244 MLDEAKSFFDIMVKKLK-MDDASYKFMMKALSDGGKLDEILE------------------ 284
ML++A F+ V K K +D +Y ++ +L G+LD+
Sbjct: 608 MLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYN 667
Query: 285 -IVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
I+ + D G I E +EF+ L K +V++L
Sbjct: 668 AIITALTDSGRI---REAEEFMSKMLEKGXLPXQVLQL 702
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 150/321 (46%), Gaps = 39/321 (12%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+V + + ++ GY ++ ++A+E N N S V N++LDALC G+
Sbjct: 203 GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSP--DNVTYNTILDALCKKGRLG 260
Query: 102 EALKLFDRMKNEHNPPKRLAVNL------------------------------GSFNVMA 131
+A L MK+ P R N+ ++N++
Sbjct: 261 DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLI 320
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
+G C +GR ++A ++ +M + PD +S+N LI+ + ++EA +L EMS+KGV
Sbjct: 321 NGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVK 380
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
P+ T+ +++ + ++DD + KM +SG P+ YN L+ + G + EA
Sbjct: 381 PNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRT 440
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ--EFVKGE 308
D M +K +KMD + +++ L KL+E +++ G F +E+ + G
Sbjct: 441 MDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG--YFIDEVSYGTLIVGY 498
Query: 309 LSKEGREEEVVKLM-EKKERE 328
K+G + +KL E KE+E
Sbjct: 499 F-KDGNVDRALKLWDEMKEKE 518
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 32/221 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D Y+ ++ G+ R+GD + F+ ++ E D L++G M+GM E
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE--NSFKPDVFTCNILLRGLCMEGMLE 610
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A++ +N V + ++ V N+++ +LC G+ D+A L M+ K L +
Sbjct: 611 KALKLFNTWVSKGKAI--DTVTYNTLITSLCKEGRLDDAFNLLSEMEE-----KELGPDH 663
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD-----------------------TLS 161
++N + GR ++A E KM E P +++
Sbjct: 664 YTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVA 723
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
++ I +LC G +A ++GE KG+ D+ TY LMD
Sbjct: 724 YSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMD 764
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 9/202 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADG---YCGQGRFKDAI 144
++ + A +G+ A ++F +MK RL NL + N + + Y +
Sbjct: 139 DTAIGAYVQSGQPHHAFQIFKKMKR-----LRLRPNLLTCNTLLNSLVRYPSSHSVSFSR 193
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
E F + P+ +FN +I C +A E M +PD TY ++DA
Sbjct: 194 EAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDAL 253
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDD 263
+ R+ D M GL PN YN LV ++G L EA + ++M + L D
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDV 313
Query: 264 ASYKFMMKALSDGGKLDEILEI 285
+Y ++ L + G+++E ++
Sbjct: 314 WTYNMLINGLCNEGRIEEAFKL 335
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 42/290 (14%)
Query: 40 LGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGK 99
LG + V YG LM+G+ G ++A+E +E +++ V+ + V + +++ LC GK
Sbjct: 23 LGSYAVNEVSYGILMQGFCKAGEFQQALELLDEM--KSNGVRPNVVIHTTIIRGLCTAGK 80
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
+AL F R+ + P N+ +++++ D C G+ +A + +M + CSP+
Sbjct: 81 VSQALLHFRRIGEDCAP------NVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNV 134
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG------ 213
+++N LID K L E L EMS +G D TY +++D + N +D+
Sbjct: 135 VTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNA 194
Query: 214 ------ATY---------------------FRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
TY KM+ G RPN Y ++ L + LD
Sbjct: 195 LEKRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLD 254
Query: 247 EA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
EA + + + K DD SYK ++ A + G+ + LE++G +L G I
Sbjct: 255 EAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYI 304
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 124/284 (43%), Gaps = 16/284 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G AD + Y+ ++ F ++ D +RL L+++ + V Y SL
Sbjct: 160 MSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR------NVVTYNSLFTALSTA 213
Query: 61 --GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
EA+ + + E + + + V +VL LC N + DEA ++ M ++
Sbjct: 214 EGDRTTEALSLLEKMIQEGT--RPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTD 271
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ S+ ++ + GR D++E+ +M DT + N +I + CK G L EA
Sbjct: 272 DV-----SYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEA 326
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+L+ M +G P TY L+ A + + D +M+ + +PN+ YN ++
Sbjct: 327 HQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKS 386
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ +EA+ F +MV D SY + + +D D+
Sbjct: 387 FCREQREEEARGIFQMMVDSGCFPDRVSYTTLKISKNDAAIYDQ 430
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 146/348 (41%), Gaps = 36/348 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V + ++ L+ + R G D +FE+++ K G++ D V + +++
Sbjct: 323 MVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNK--GMIPDTVTFATVISSLCRI 380
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-- 118
G ++A+ +N V + V S ++ CN+G+ +A +L M N+ PP
Sbjct: 381 GRLDDALHKFNHMV--DIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 438
Query: 119 --------------RLA---------------VNLGSFNVMADGYCGQGRFKDAIEVFRK 149
R+A N+ +FN + +GYC G ++A +
Sbjct: 439 KYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 498
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M P+ + L+D CKNG + +A ++ +M KGV P Y +++ F+ R
Sbjct: 499 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARR 558
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKF 268
F +M++SG ++ Y ++G L + DEA + + +K D ++
Sbjct: 559 TTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 618
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
++ A+ G+ E E+ I G + + + +E EE
Sbjct: 619 VISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEE 666
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 11/259 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D V Y+ L+ G + + R+ E++ + G+ + Y SL+ GY
Sbjct: 183 MIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVD--AGIRPNNKTYNSLIYGYSTA 240
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVAN-NSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
GM +E++ + E +SS + V N NS + ALC + + EA +FD M + P
Sbjct: 241 GMWKESVRVFKEM---SSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKP-- 295
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ S++ + GY +G F + + M P+ FN LI+ + GM+ +A
Sbjct: 296 ---NIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAM 352
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
++ +M +KG+ PD T+ ++ + + R+DD F MVD G+ P+ AVY L+
Sbjct: 353 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGC 412
Query: 240 VQVGMLDEAKSFFDIMVKK 258
G L +AK M+ K
Sbjct: 413 CNHGELVKAKELISEMMNK 431
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 140/292 (47%), Gaps = 22/292 (7%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P +Y+Y +L + R + +F L G+ D Y +L+ G+ +G ++A
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRT--GLGPDVCSYNTLIDGFSKEGEVDKAY 177
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E + + + + SV V NS++D LC + ++ ++ ++M + P N ++
Sbjct: 178 ELFYKMIEQ--SVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRP-----NNKTY 230
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + GY G +K+++ VF++M P ++ N+ I LC++ + EA++++ M
Sbjct: 231 NSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVL 290
Query: 188 KGVNPDEYTYGLLM-----DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
KG P+ +Y L+ + CF + + MV G+ PN +N L+ +
Sbjct: 291 KGPKPNIISYSTLLHGYAAEGCFA-----NMNSLVNLMVSKGIVPNHRFFNILINAYARC 345
Query: 243 GMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
GM+D+A F D+ K + D ++ ++ +L G+LD+ L ++D G
Sbjct: 346 GMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 397
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 93 ALCNNGKFDEALKLFDRMKNEHNPPKRL-AVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
A C++G A++LF RM P A + ++N++ D Y R + A+ VF ++
Sbjct: 91 AACSDGP-ALAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLL 149
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
PD S+N LID K G + +A EL+ +M ++ V+PD TY L+D + +
Sbjct: 150 RTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMV 209
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+MVD+G+RPN YN L+ GM E+ F
Sbjct: 210 KSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVF 250
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 127/277 (45%), Gaps = 10/277 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V ++ LM G+ G+ + F L + + G+ + +YG+L+ GY G ++A+ +
Sbjct: 474 VTFNSLMEGYCLVGNMEEAFALLDAMASI--GIEPNCYIYGTLVDGYCKNGRIDDALTVF 531
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + VK ++V N +L L + A K+F M V++ ++ V+
Sbjct: 532 RDML--HKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGT-----TVSIQTYGVV 584
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G C +A + K+ D ++FN +I + K G EA+EL+ +S G+
Sbjct: 585 LGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGL 644
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P +TY L++ + ++ F + SG P+ + N +V L++ + +A +
Sbjct: 645 VPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASN 704
Query: 251 FFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+ I+ L ++ ++ + S GK E ++++
Sbjct: 705 YLSIIDENNLTLEASTISLLASLFSREGKCREHIKLL 741
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 152/314 (48%), Gaps = 16/314 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE-KLGGVVSDGVVYGSLMKGYFMKGME 63
GF D V Y+ L+ + G S E LKE + G V Y SL+ Y G+
Sbjct: 321 GFSPDKVTYNALLDVY---GKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLL 377
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAME ++ V + +K ++L GK D A+K+F+ M+ P N
Sbjct: 378 DEAMELKSQMVKKG--IKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQP-----N 430
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN + + +G F + ++VF ++ C PD +++N L+ +NGM +E ++
Sbjct: 431 ICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFK 490
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G P+ T+ L+ A D +R+M+D+G+ P+L+ YN ++ L + G
Sbjct: 491 EMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGG 550
Query: 244 MLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEIL----EIVGGILDDGGIEFS 298
+ +++ K ++ + K ++ +Y ++ A ++G +++ + EI GI++ +
Sbjct: 551 LWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLK 610
Query: 299 EELQEFVKGELSKE 312
+ + K +L E
Sbjct: 611 TLVLVYSKSDLLTE 624
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 7/211 (3%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
N V + A S++ A +NG++ EA+ +F +++ E P L ++NV+ + Y
Sbjct: 213 NDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRP-----TLITYNVILNVYGK 267
Query: 137 QGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
G I + M +PD ++N LI + + EA E++ EM G +PD+
Sbjct: 268 MGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKV 327
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
TY L+D + R + ++M SG P++ YN L+ + G+LDEA M
Sbjct: 328 TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM 387
Query: 256 VKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
VKK +K D +Y ++ GK D +++
Sbjct: 388 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMKV 418
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+L ++N + Y F+ + ++ R++ PD +SFN +I C+NG + EA ++
Sbjct: 675 SLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIF 734
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM D G+ PD TY + + + + + M+ + +PN YN L+ ++
Sbjct: 735 AEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKL 794
Query: 243 GMLDEAKSF 251
DEA SF
Sbjct: 795 NRRDEANSF 803
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 11/247 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNG-KF 100
GV D Y SL+ Y G EA+ + + E + + + N +L+ G +
Sbjct: 215 GVHIDIYAYTSLITAYASNGRYREAVMVFKKL--EEEGCRPTLITYNVILNVYGKMGMPW 272
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR-FKDAIEVFRKMGEYRCSPDT 159
+ L D MK+ P +L ++N + C +G +++A EVF +M SPD
Sbjct: 273 SKIAGLVDSMKSSGVAP-----DLYTYNTLISS-CRRGSLYEEAAEVFEEMKAAGFSPDK 326
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
+++N L+D K+ EA E+ EM G P TY L+ A +D+ +
Sbjct: 327 VTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQ 386
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGK 278
MV G++P++ Y L+ + G D A F+ M V + + ++ ++K + G
Sbjct: 387 MVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGN 446
Query: 279 LDEILEI 285
E++++
Sbjct: 447 FVEMMKV 453
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 9/190 (4%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
R F EL+E+ G D +++ Y + M + E N ++S S NS+
Sbjct: 627 RAFLELREQ--GFSPDITTLNAMVSIYGRRRMVSKTNEILN--FIKDSGFTPSLTTYNSL 682
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ F+++ + + + P ++ SFN + YC GR K+A +F +M
Sbjct: 683 MYMYSRTEHFEKSEDILREIIAKGMKP-----DIISFNTVIFAYCRNGRMKEASRIFAEM 737
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
++ +PD +++N I + M EA ++ M P++ TY L+D ++NR
Sbjct: 738 KDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRR 797
Query: 211 DDGATYFRKM 220
D+ ++ +
Sbjct: 798 DEANSFISNL 807
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 115/282 (40%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ ++ R G + ++ E+K+ G + + Y SL+ Y
Sbjct: 527 MLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKD--GRCKPNELTYCSLLHAY-AN 583
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E E M E + + ++ AV +++ + E + F ++ + P
Sbjct: 584 GKEVERMSALAEEI-YSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSP--- 639
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + N M Y + E+ + + +P ++N+L+ + ++E+
Sbjct: 640 --DITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSED 697
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ E+ KG+ PD ++ ++ A R+ + + F +M D GL P++ YN +
Sbjct: 698 ILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYA 757
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDE 281
M EA M+K + K + +Y ++ + DE
Sbjct: 758 SDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDE 799
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+I L K G + A L ++ + GV+ D Y Y L+ A R + F+K+ + G
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250
Query: 225 LRPNLAVYNRLVGKLVQVGM 244
RP L YN ++ ++GM
Sbjct: 251 CRPTLITYNVILNVYGKMGM 270
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ KG D + ++ ++ + R+G R+F E+K+ G+ D + Y + + Y
Sbjct: 702 IIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKD--FGLAPDVITYNTFIASYASD 759
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN 112
M EA++ + + K + NS++D C + DEA ++N
Sbjct: 760 SMFIEAIDVVKYMI--KNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLRN 809
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 135/276 (48%), Gaps = 10/276 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D V Y+ L+ + + ++ E+ L G V Y SL+ Y GM +
Sbjct: 309 GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV--LNGFSPSIVTYNSLISAYARDGMLD 366
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EAME N+ + + K ++L GK + A+ +F+ M+N P N+
Sbjct: 367 EAMELKNQMAEKGT--KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP-----NI 419
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN Y +G+F + +++F ++ SPD +++N L+ +NGM +E ++ E
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G P+ T+ L+ A + T +R+M+D+G+ P+L+ YN ++ L + GM
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 245 LDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKL 279
++++ M + K ++ +Y ++ A ++G ++
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 12/279 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ R ++FEE+K G D V Y +L+ Y +
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA--AGFSYDKVTYNALLDVYGKSHRPK 331
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EAM+ NE V S S V NS++ A +G DEA++L ++M + P ++
Sbjct: 332 EAMKVLNEMVLNGFSP--SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP-----DV 384
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G+ G+ + A+ +F +M C P+ +FN I G E +++ E
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGAT-YFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++ G++PD T+ L+ A F N +D + F++M +G P +N L+ + G
Sbjct: 445 INVCGLSPDIVTWNTLL-AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
++A + + M+ + D ++Y ++ AL+ GG ++
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 124/280 (44%), Gaps = 11/280 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D Y+ L+ F G +F++++E G + Y ++ + G
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED--GCKPTLITYNVILNVFGKMGTPW 260
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD-EALKLFDRMKNEHNPPKRLAVN 123
+ E + ++ + A N+++ C G EA ++F+ MK + +
Sbjct: 261 NKITSLVEKM-KSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAG-----FSYD 313
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + D Y R K+A++V +M SP +++N+LI ++GML EA EL
Sbjct: 314 KVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKN 373
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M++KG PD +TY L+ +V+ + F +M ++G +PN+ +N + G
Sbjct: 374 QMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Query: 244 MLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEI 282
E FD I V L D ++ ++ G E+
Sbjct: 434 KFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ ++N + + F + E+ R++ PD +S+N +I C+N + +A ++
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM + G+ PD TY + + + ++ R M+ G RPN YN +V ++
Sbjct: 723 SEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKL 782
Query: 243 GMLDEAKSFFD 253
DEAK F +
Sbjct: 783 NRKDEAKLFVE 793
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 17/262 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF-- 58
M G D Y+ ++ R G + ++ E+++ G + + Y SL+ Y
Sbjct: 515 MLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED--GRCKPNELTYCSLLHAYANG 572
Query: 59 --MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+ M A E Y+ + + + + V S D L EA + F +K
Sbjct: 573 KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLL------PEAERAFSELKERGFS 626
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P ++ + N M Y + A V M E +P ++N+L+ ++
Sbjct: 627 P-----DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++EE+ E+ KG+ PD +Y ++ A R+ D + F +M +SG+ P++ YN +
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Query: 237 GKLVQVGMLDEAKSFFDIMVKK 258
G M +EA M+K
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKH 763
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A + F K +Y+ D +I L K G ++ A ++ + + G + D Y+Y L+
Sbjct: 157 AFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLIS 216
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
A R + F+KM + G +P L YN ++ ++G
Sbjct: 217 AFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMG 257
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ KG D + Y+ ++ + R+ R+F E++ G+V D + Y + + Y
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN--SGIVPDVITYNTFIGSYAAD 747
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN--EHNP 116
M EEA+ + + NS++D C + DEA + ++N H P
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNTY--NSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 12/312 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGM 62
KGFV D + L+ G G D FR+ KE LG G V D V Y +L+ G K
Sbjct: 488 KGFVVDTRTSNALLHGLCEAGKLDEAFRI---QKEILGRGCVMDRVSYNTLISGCCGKKK 544
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+EA +E V +K + ++ L N K +EA++ +D K P
Sbjct: 545 LDEAFMFLDEMV--KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP----- 597
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ +++VM DG C R ++ E F +M P+T+ +N+LI C++G L+ A EL
Sbjct: 598 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 657
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M KG++P+ TY L+ ++RV++ F +M GL PN+ Y L+ ++
Sbjct: 658 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 717
Query: 243 GMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G + + + ++ K + + +Y M+ + G + E ++ + + G + S
Sbjct: 718 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 777
Query: 302 QEFVKGELSKEG 313
+EF+ G L + G
Sbjct: 778 KEFIYGYLKQGG 789
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 153/333 (45%), Gaps = 11/333 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG Y+ L+ G+ ++G +D RL +E+ +G V+ G + S++
Sbjct: 380 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS-IGFNVNQGS-FTSVICLLCSH 437
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M + A+ E + N S + +++ LC +GK +AL+L+ + N K
Sbjct: 438 LMFDSALRFVGEMLLRNMSPGGGLLT--TLISGLCKHGKHSKALELWFQFLN-----KGF 490
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
V+ + N + G C G+ +A + +++ C D +S+N LI C L EA
Sbjct: 491 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 550
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
EM +G+ PD YTY +L+ F +N+V++ ++ +G+ P++ Y+ ++
Sbjct: 551 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 610
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ +E + FFD +M K ++ + Y +++A G+L LE+ + G S
Sbjct: 611 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 670
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
+KG +S R EE L E+ E E
Sbjct: 671 TYTSLIKG-MSIISRVEEAKLLFEEMRMEGLEP 702
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S N +L +L +F + + FD + +P L F + +C G+ ++
Sbjct: 214 SKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYL------FTTAINAFCKGGKVEE 267
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+++F KM E +P+ ++FN +ID L G EA +M ++G+ P TY +L+
Sbjct: 268 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 327
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
R+ D ++M G PN+ VYN L+ ++ G L++A D+MV K L +
Sbjct: 328 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 387
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++Y ++K G+ D ++ +L G
Sbjct: 388 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 419
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 10/250 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D YS L+ G + + +++ K G++ D Y ++ G
Sbjct: 555 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR--NGMLPDVYTYSVMIDGCCKA 612
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EE E ++E + +N V+ + V N ++ A C +G+ AL+L + MK++ P
Sbjct: 613 ERTEEGQEFFDEMMSKN--VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP--- 667
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++ + G R ++A +F +M P+ + LID K G + + E
Sbjct: 668 --NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 725
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV-GKL 239
L EM K V+P++ TY +++ V + + +M + G+ P+ Y + G L
Sbjct: 726 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 785
Query: 240 VQVGMLDEAK 249
Q G+L+ K
Sbjct: 786 KQGGVLEAFK 795
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 138/319 (43%), Gaps = 12/319 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + L+ VR + F+ + + GV D ++ + + + G
Sbjct: 209 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK---GVSPDVYLFTTAINAFCKGGKV 265
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EEA++ +++ E + V + V N+V+D L G++DEA ++M P
Sbjct: 266 EEAVKLFSKM--EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP-----T 318
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +++++ G R DA V ++M + P+ + +NNLID + G L +A E+
Sbjct: 319 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 378
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M KG++ TY L+ + + D+ ++M+ G N + ++ L
Sbjct: 379 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 438
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
M D A F +++++ + ++ L GK + LE+ L+ G + +
Sbjct: 439 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 498
Query: 303 EFVKGELSKEGREEEVVKL 321
+ G L + G+ +E ++
Sbjct: 499 ALLHG-LCEAGKLDEAFRI 516
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 149/359 (41%), Gaps = 44/359 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ G D S L + + G D V Y +++ G +G +
Sbjct: 166 GCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLD 225
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A ++ + S + V +S++ AL D+A ++F RM P +
Sbjct: 226 KAYSLFDAMLDRGPSPDV--VTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIM--- 280
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ + GYC G+ K+AI +F+KM + PD +++ L+D LCKNG EA +++
Sbjct: 281 --YTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDS 338
Query: 185 MSDKGVNPDEYTYG-----------------------------------LLMDACFEVNR 209
+ +G PD TYG ++M A + N+
Sbjct: 339 LVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNK 398
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
VD+ F M GL P++ Y ++ L G +D+A S F+ + + L + +
Sbjct: 399 VDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTT 458
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
++ L K D++ E+ ++D GI + G L K+GR E L + R
Sbjct: 459 LIHGLCTCDKWDKVEELAFEMIDR-GICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVR 516
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 157/360 (43%), Gaps = 48/360 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V YS ++ + D ++F + + GV+ D ++Y SL+ GY
Sbjct: 234 MLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKN--GVMPDCIMYTSLVHGYCSS 291
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
G +EA+ + + V+ V +++D LC NGK EA K+FD + K H P
Sbjct: 292 GKPKEAIGIFKKMC--RHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDST 349
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ + GY +G + ++ M + FN ++ K+ + EA
Sbjct: 350 ------TYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEAL 403
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV--- 236
++ M +G+NPD YG ++D RVDD + F + GL PN+ V+ L+
Sbjct: 404 LVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGL 463
Query: 237 --------------------------------GKLVQVGMLDEAKSFFDIMVK-KLKMDD 263
G L + G + EAK+ FD+MV+ ++ +
Sbjct: 464 CTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNT 523
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+Y ++ GK+DE ++++ G++ G++ S+ + S+ GR E+ + L+
Sbjct: 524 NTYNTLIDGYCLDGKMDEAMKLL-GVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLR 582
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 130/320 (40%), Gaps = 65/320 (20%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V Y+ LM ++G S ++F+ L ++ G D YG+L+ GY +
Sbjct: 304 MCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKR--GHKPDSTTYGTLLHGYATE 361
Query: 61 G-----------MEEEAME----CYNEAVG------------------ENSSVKMSAVAN 87
G M ++ M+ +N +G + V
Sbjct: 362 GALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNY 421
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPP------------------------------ 117
+VLD LC G+ D+AL F+ +K+E P
Sbjct: 422 GTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMID 481
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+ + ++ FN + C +GR +A +F M P+T ++N LID C +G + E
Sbjct: 482 RGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDE 541
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A +L G M GV P + TY +++ + R++DG T R+M G+ P + Y L+
Sbjct: 542 AMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQ 601
Query: 238 KLVQVGMLDEAKSFFDIMVK 257
L Q G AK + M+K
Sbjct: 602 GLFQAGRTVAAKELYLRMIK 621
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 4/181 (2%)
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD-KGVNP-DEYTYGLLMDA 203
V R+M E C PD S+ L+ LC + +A +L M+D KG P D Y +++
Sbjct: 158 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 217
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD 263
++D + F M+D G P++ Y+ ++ L + +D+A F MVK M D
Sbjct: 218 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 277
Query: 264 A-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLM 322
Y ++ GK E + I + G+E + L K G+ E K+
Sbjct: 278 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRH-GVEPDVVTYTALMDYLCKNGKSTEARKIF 336
Query: 323 E 323
+
Sbjct: 337 D 337
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM F ++G+ +F+ + + G+ V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHRFCKEGEMRLAQSVFDAITK--WGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N S V+ + +++ LC + DEA LF M + P N
Sbjct: 189 EGFRLKNAM--RASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A++++R+M SPD +++N LI LCK G L +A L E
Sbjct: 242 VTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ +M+ +R + VY L+ L Q G
Sbjct: 302 MSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
+D K +++ LK DD +Y +M G + + E++
Sbjct: 362 AVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELL 404
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 9/227 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF E+ + G+V +GV + +L+ G+
Sbjct: 197 MRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AM+ Y + + N V N+++ LC G +A L D M + P ++
Sbjct: 255 GRLDLAMDIYRQML--NQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E+ +M + D + + LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
+ EM G+ PD+ TY ++M+ + V + R+M +G P
Sbjct: 368 MLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVP 414
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 19/254 (7%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+V+ + + +++ LC + F EA L + + AV +
Sbjct: 6 NSTVRHTLQSYCTMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFR--KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+ F+ + Y G +DAIE FR K +R DT N+++ L K
Sbjct: 66 IYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTC--RNVLEHLMKXKYFKLVWGF 123
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
Y E+ + G Y + +LM + + + F + GLRP++ +N L+ ++
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 242 VGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+G LDE + M ++ D +Y ++ L ++DE + G +LD+G +
Sbjct: 184 LGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVT 243
Query: 301 LQEFVKGELSKEGR 314
+ G K GR
Sbjct: 244 FTTLIDGH-CKNGR 256
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 121/253 (47%), Gaps = 10/253 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFR-LFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
GF+ + Y+ ++ +R S + +F+E+ E GV + Y L++G+ G
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVE--SGVSPNVYTYNILIRGFCTAGNL 219
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E + + E E + + V N+++DA C K EA KL M K L N
Sbjct: 220 EMGLXFFGEM--ERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLM-----ALKGLNPN 272
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L S+NV+ +G C +G+ K+ E+ +M + R PD ++FN LI+ C G +A L+
Sbjct: 273 LISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHA 332
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G++P+ TY L+++ + ++ + +M D GL PN Y L+ Q G
Sbjct: 333 EMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQG 392
Query: 244 MLDEAKSFFDIMV 256
L +A MV
Sbjct: 393 FLKQAYQIMKEMV 405
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 157/328 (47%), Gaps = 17/328 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG + + Y+ ++ G R+G + EE+ ++ V D V + +L+ GY
Sbjct: 264 MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKR--RYVPDRVTFNTLINGYCNV 321
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A+ + E V + + + V ++++++C G + A++ D+M++ P
Sbjct: 322 GNFHQALVLHAEMV--KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHP--- 376
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++ + DG+ QG K A ++ ++M E +P +++N LI+ C G + +A
Sbjct: 377 --NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASG 434
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM ++G PD +Y ++ ++ +MV G+ P++A Y+ L+ L
Sbjct: 435 LLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLC 494
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ L E F M+ L D+ +Y ++ A G LD+ L + ++ G FS
Sbjct: 495 KQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG---FSP 551
Query: 300 ELQEF---VKGELSKEGREEEVVKLMEK 324
++ + + G +K+ R +E +L+ K
Sbjct: 552 DIVTYNVLING-FNKQSRTKEAKRLLLK 578
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 145/328 (44%), Gaps = 31/328 (9%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
P VY+Y L+ GF G+ + F E++ G + + V Y +++ Y
Sbjct: 199 VSPNVYTYNILIRGFCTAGNLEMGLXFFGEMER--NGCLPNVVTYNTIIDAY-------- 248
Query: 66 AMECYNEAVGEN---------SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
C +GE + + ++ N V++ LC G+ E ++ + M
Sbjct: 249 ---CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P R+ +FN + +GYC G F A+ + +M + SP+ +++ LI+ +CK G L
Sbjct: 306 PDRV-----TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
A E +M D+G++P+ TY L+D + + ++MV++G P + YN L+
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+G +++A M+++ D SY ++ +L++ ++ ++ G
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLME 323
++G L K+ R EV L +
Sbjct: 481 PDVATYSSLIQG-LCKQRRLGEVCDLFQ 507
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 142/314 (45%), Gaps = 25/314 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF+ D V YS ++ GF R+ + + F+L E+ K G+ D Y SL++G +
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAK--GISPDVATYSSLIQGLCKQ 496
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E + + E + + + V S+++A C G D+AL+L D M + P
Sbjct: 497 RRLGEVCDLFQEML--SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP--- 551
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ------------ 168
++ ++NV+ +G+ Q R K+A + K+ P+ +++N LID
Sbjct: 552 --DIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALAL 609
Query: 169 ---LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
C G++ EA+ + M KG +E Y +++ +V ++ +++M+ SG
Sbjct: 610 MKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGF 669
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASY-KFMMKALSDGGKLDEILE 284
P+ L L G E D +K ++ +A+ K ++ S G +D +
Sbjct: 670 APHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFN 729
Query: 285 IVGGILDDGGIEFS 298
++ + G + +S
Sbjct: 730 VLKDMALSGLLPYS 743
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
Query: 126 SFNVMADGYCGQGRFKDAIEV----FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
S+N + D R K ++++ F++M E SP+ ++N LI C G L
Sbjct: 169 SYNAILDAVI---RTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXF 225
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+GEM G P+ TY ++DA ++ ++ + R M GL PNL YN ++ L +
Sbjct: 226 FGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCR 285
Query: 242 VGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
G + E + M K+ + D ++ ++ + G + L + ++ +G
Sbjct: 286 EGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 149/359 (41%), Gaps = 44/359 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ G D S L + + G D V Y +++ G +G +
Sbjct: 165 GCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLD 224
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A ++ + S + V +S++ AL D+A ++F RM P +
Sbjct: 225 KAYSLFDAMLDRGPSPDV--VTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIM--- 279
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ + GYC G+ K+AI +F+KM + PD +++ L+D LCKNG EA +++
Sbjct: 280 --YTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDS 337
Query: 185 MSDKGVNPDEYTYG-----------------------------------LLMDACFEVNR 209
+ +G PD TYG ++M A + N+
Sbjct: 338 LVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNK 397
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
VD+ F M GL P++ Y ++ L G +D+A S F+ + + L + +
Sbjct: 398 VDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTT 457
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKER 327
++ L K D++ E+ ++D GI + G L K+GR E L + R
Sbjct: 458 LIHGLCTCDKWDKVEELAFEMIDR-GICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVR 515
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 157/360 (43%), Gaps = 48/360 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V YS ++ + D ++F + + GV+ D ++Y SL+ GY
Sbjct: 233 MLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKN--GVMPDCIMYTSLVHGYCSS 290
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
G +EA+ + + V+ V +++D LC NGK EA K+FD + K H P
Sbjct: 291 GKPKEAIGIFKKMC--RHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDST 348
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++ + GY +G + ++ M + FN ++ K+ + EA
Sbjct: 349 ------TYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEAL 402
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV--- 236
++ M +G+NPD YG ++D RVDD + F + GL PN+ V+ L+
Sbjct: 403 LVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGL 462
Query: 237 --------------------------------GKLVQVGMLDEAKSFFDIMVK-KLKMDD 263
G L + G + EAK+ FD+MV+ ++ +
Sbjct: 463 CTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNT 522
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+Y ++ GK+DE ++++ G++ G++ S+ + S+ GR E+ + L+
Sbjct: 523 NTYNTLIDGYCLDGKMDEAMKLL-GVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLR 581
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 130/320 (40%), Gaps = 65/320 (20%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V Y+ LM ++G S ++F+ L ++ G D YG+L+ GY +
Sbjct: 303 MCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKR--GHKPDSTTYGTLLHGYATE 360
Query: 61 G-----------MEEEAME----CYNEAVG------------------ENSSVKMSAVAN 87
G M ++ M+ +N +G + V
Sbjct: 361 GALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNY 420
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPP------------------------------ 117
+VLD LC G+ D+AL F+ +K+E P
Sbjct: 421 GTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMID 480
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+ + ++ FN + C +GR +A +F M P+T ++N LID C +G + E
Sbjct: 481 RGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDE 540
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A +L G M GV P + TY +++ + R++DG T R+M G+ P + Y L+
Sbjct: 541 AMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQ 600
Query: 238 KLVQVGMLDEAKSFFDIMVK 257
L Q G AK + M+K
Sbjct: 601 GLFQAGRTVAAKELYLRMIK 620
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 5/201 (2%)
Query: 127 FNVMADGYCGQGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
F+ + G C + R DA++ V R+M E C PD S+ L+ LC + +A +L M
Sbjct: 137 FSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIM 196
Query: 186 SD-KGVNP-DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+D KG P D Y +++ ++D + F M+D G P++ Y+ ++ L +
Sbjct: 197 ADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQ 256
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+D+A F MVK M D Y ++ GK E + I + G+E
Sbjct: 257 AMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRH-GVEPDVVTY 315
Query: 303 EFVKGELSKEGREEEVVKLME 323
+ L K G+ E K+ +
Sbjct: 316 TALMDYLCKNGKSTEARKIFD 336
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 149/321 (46%), Gaps = 11/321 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV + V+Y+ ++ G ++ D + +F +++K G+ +D V Y +L+ G G
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK--GIRADAVTYNTLISGLSNSGRWT 236
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + V + + + +++D G EA L+ M P N+
Sbjct: 237 DAARLLRDMVKR--KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP-----NV 289
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + +G+C G DA +F M C PD +++N LI CK+ + + +L+ E
Sbjct: 290 FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 349
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ +G+ D +TY L+ + +++ F +MVD G+ P++ YN L+ L G
Sbjct: 350 MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK 409
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
+++A D+ ++ +D +Y +++ L KL E + + G +
Sbjct: 410 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 469
Query: 304 FVKGELSKEGREEEVVKLMEK 324
+ G L ++G + E KL +
Sbjct: 470 MISG-LCRKGLQREADKLCRR 489
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V Y+ L+ GF + + +LF E+ + G+V D Y +L+ GY
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ--GLVGDAFTYNTLIHGYCQA 372
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A + +N V + V V N +LD LCNNGK ++AL + + ++ +
Sbjct: 373 GKLNVAQKVFNRMV--DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKS-----EM 425
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
V++ ++N++ G C + K+A +FR + PD +++ +I LC+ G+ EA++
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 181 LYGEMSDKGVNPDEYTY 197
L M + G P E Y
Sbjct: 486 LCRRMKEDGFMPSERIY 502
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 128/275 (46%), Gaps = 10/275 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG AD V Y+ L+ G G RL ++ ++ + + + + +L+ + +G
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR--KIDPNVIFFTALIDTFVKEGNL 270
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA Y E + SV + NS+++ C +G +A +FD M ++ P +
Sbjct: 271 LEARNLYKEMI--RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP-----D 323
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + G+C R +D +++F +M D ++N LI C+ G L A++++
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M D GV+PD TY +L+D +++ + S + ++ YN ++ L +
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
L EA F + +K +K D +Y M+ L G
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
V LGS + +G+C RF++A+ + M + P+ + +N +I+ LCKN L A E+
Sbjct: 150 VTLGS---LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ M KG+ D TY L+ R D A R MV + PN+ + L+ V+
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 242 VGMLDEAKSFFDIMVKK 258
G L EA++ + M+++
Sbjct: 267 EGNLLEARNLYKEMIRR 283
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 10/213 (4%)
Query: 99 KFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
KFD+A LF M P ++ F + +F I ++ KM S D
Sbjct: 59 KFDDAFSLFCEMLQSRPIP-----SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHD 113
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
SF LI C+ L+ A L G+M G P T G L++ + NR + +
Sbjct: 114 LYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD 173
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
M G PN+ +YN ++ L + L+ A F M KK ++ D +Y ++ LS+ G
Sbjct: 174 SMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 278 KLDE----ILEIVGGILDDGGIEFSEELQEFVK 306
+ + + ++V +D I F+ + FVK
Sbjct: 234 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 12/312 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGM 62
KGFV D + L+ G G D FR+ KE LG G V D V Y +L+ G K
Sbjct: 512 KGFVVDTRTSNALLHGLCEAGKLDEAFRI---QKEILGRGCVMDRVSYNTLISGCCGKKK 568
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+EA +E V +K + ++ L N K +EA++ +D K P
Sbjct: 569 LDEAFMFLDEMV--KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP----- 621
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ +++VM DG C R ++ E F +M P+T+ +N+LI C++G L+ A EL
Sbjct: 622 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 681
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M KG++P+ TY L+ ++RV++ F +M GL PN+ Y L+ ++
Sbjct: 682 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 741
Query: 243 GMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G + + + ++ K + + +Y M+ + G + E ++ + + G + S
Sbjct: 742 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 801
Query: 302 QEFVKGELSKEG 313
+EF+ G L + G
Sbjct: 802 KEFIYGYLKQGG 813
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 154/340 (45%), Gaps = 11/340 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG Y+ L+ G+ ++G +D RL +E+ +G V+ G + S++
Sbjct: 404 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS-IGFNVNQGS-FTSVICLLCSH 461
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M + A+ E + N S + +++ LC +GK +AL+L+ + N K
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLT--TLISGLCKHGKHSKALELWFQFLN-----KGF 514
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
V+ + N + G C G+ +A + +++ C D +S+N LI C L EA
Sbjct: 515 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 574
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
EM +G+ PD YTY +L+ F +N+V++ ++ +G+ P++ Y+ ++
Sbjct: 575 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 634
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ +E + FFD +M K ++ + Y +++A G+L LE+ + G S
Sbjct: 635 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 694
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+KG +S R EE L E+ E E A
Sbjct: 695 TYTSLIKG-MSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 733
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S N +L +L +F + + FD + +P L F + +C G+ ++
Sbjct: 238 SKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYL------FTTAINAFCKGGKVEE 291
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+++F KM E +P+ ++FN +ID L G EA +M ++G+ P TY +L+
Sbjct: 292 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 351
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
R+ D ++M G PN+ VYN L+ ++ G L++A D+MV K L +
Sbjct: 352 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 411
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++Y ++K G+ D ++ +L G
Sbjct: 412 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 443
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 10/250 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D YS L+ G + + +++ K G++ D Y ++ G
Sbjct: 579 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR--NGMLPDVYTYSVMIDGCCKA 636
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EE E ++E + +N V+ + V N ++ A C +G+ AL+L + MK++ P
Sbjct: 637 ERTEEGQEFFDEMMSKN--VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP--- 691
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++ + G R ++A +F +M P+ + LID K G + + E
Sbjct: 692 --NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 749
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV-GKL 239
L EM K V+P++ TY +++ V + + +M + G+ P+ Y + G L
Sbjct: 750 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 809
Query: 240 VQVGMLDEAK 249
Q G+L+ K
Sbjct: 810 KQGGVLEAFK 819
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 138/319 (43%), Gaps = 12/319 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + L+ VR + F+ + + GV D ++ + + + G
Sbjct: 233 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK---GVSPDVYLFTTAINAFCKGGKV 289
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EEA++ +++ E + V + V N+V+D L G++DEA ++M P
Sbjct: 290 EEAVKLFSKM--EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP-----T 342
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +++++ G R DA V ++M + P+ + +NNLID + G L +A E+
Sbjct: 343 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 402
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M KG++ TY L+ + + D+ ++M+ G N + ++ L
Sbjct: 403 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 462
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
M D A F +++++ + ++ L GK + LE+ L+ G + +
Sbjct: 463 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 522
Query: 303 EFVKGELSKEGREEEVVKL 321
+ G L + G+ +E ++
Sbjct: 523 ALLHG-LCEAGKLDEAFRI 540
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 13/320 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V Y+ L+ GF ++G D ++L G SD + + +++ G
Sbjct: 235 KGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSY--GCQSDVISHNMILRSLCSGGRW 292
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAV 122
+AM+ A S V N +++ LC G +AL + + M K+ H P R
Sbjct: 293 MDAMKLL--ATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSR--- 347
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
SFN + G+C + AIE M C PD +++N L+ LCK+G + +A +
Sbjct: 348 ---SFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVIL 404
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
++S KG +P +Y ++D +V + + +M GL+P+L +VG L +
Sbjct: 405 SQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSRE 464
Query: 243 GMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G + EA FF + +K + Y +M L + ++ + ++ +G
Sbjct: 465 GKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASY 524
Query: 302 QEFVKGELSKEGREEEVVKL 321
+KG ++ EG EE KL
Sbjct: 525 TTLIKG-ITYEGLAEEASKL 543
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 139/303 (45%), Gaps = 13/303 (4%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
+R+G+ + R E + K G + D V +L++ + G + A + E S
Sbjct: 79 LIRNGELEEGSRFLEYMTNK--GKIPDVVACTALIREFCKIGRTKNATRIM--GILEESG 134
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ A + N +++A C +G+ +EAL++ D +A N +++ + C +G+
Sbjct: 135 AVIDANSYNVLINAYCKSGEIEEALRVLDHTS--------VAPNAATYDAVLCSLCDRGK 186
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
K A++V + + +C PD ++ LID CK + +A +L+ EM KG PD TY +
Sbjct: 187 LKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNV 246
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKL 259
L+ + R+D+ + +K+ G + ++ +N ++ L G +A M++K
Sbjct: 247 LIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 306
Query: 260 KMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
++ ++ L G L + L ++ + G S ++G +++G + +
Sbjct: 307 CFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAI 366
Query: 319 VKL 321
L
Sbjct: 367 EHL 369
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 77/190 (40%), Gaps = 9/190 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ +DG D + +L K G + Y +++ G
Sbjct: 372 MVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSK--GCSPSLISYNTVIDGLLKV 429
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A+E E + +K + SV+ L GK EA+K F +K P
Sbjct: 430 GKAELAVELLEEMCYK--GLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKP--- 484
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N +N + G C + AI+ M C P S+ LI + G+ EA +
Sbjct: 485 --NAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASK 542
Query: 181 LYGEMSDKGV 190
L E+ +G+
Sbjct: 543 LSNELYSRGL 552
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Query: 166 IDQLCK---NGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
I LC+ NG L E M++KG PD L+ ++ R + + +
Sbjct: 73 IHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEE 132
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEI 282
SG + YN L+ + G ++EA D + + A+Y ++ +L D GKL +
Sbjct: 133 SGAVIDANSYNVLINAYCKSGEIEEALRVLD--HTSVAPNAATYDAVLCSLCDRGKLKQA 190
Query: 283 LEIV 286
++++
Sbjct: 191 MQVL 194
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 123/259 (47%), Gaps = 10/259 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG+ D ++ L+ G+ + + + + + GV D Y SL+ G
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN--GVDPDVYTYNSLLNGLCKT 509
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E+ ME Y V + + + N +L++LC K DEAL L + MKN+ P +
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTF--NILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE-YRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+F + DG+C G A +FRKM E Y+ S T ++N +I + + AE
Sbjct: 568 -----TFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L+ EM D+ + PD YTY L++D + V+ G + +M+++G P+L R++ L
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Query: 240 VQVGMLDEAKSFFDIMVKK 258
+ EA MV+K
Sbjct: 683 CVEDRVYEAAGIIHRMVQK 701
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 140/311 (45%), Gaps = 42/311 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D Y L+ G +G+++ LF E K G+ + ++Y +L+KG +GM
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK--GIKPNVILYNTLIKGLSNQGMIL 408
Query: 65 EAMECYNEA-------------VGENSSVKMSAVAN--------------------NSVL 91
EA + NE + N KM V++ N ++
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
K + AL++ D M + P ++ ++N + +G C +F+D +E ++ M
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDP-----DVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
E C+P+ +FN L++ LC+ L EA L EM +K VNPD T+G L+D + +D
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 212 DGATYFRKMVDS-GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
T FRKM ++ + + YN ++ + + A+ F MV + L D +Y+ M
Sbjct: 584 GAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 270 MKALSDGGKLD 280
+ G ++
Sbjct: 644 VDGFCKTGNVN 654
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 128/281 (45%), Gaps = 10/281 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ L+ G+ + G R+ + G V D Y SL+ G +
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD--AVFNGFVPDQFTYRSLIDGLCHE 369
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A+ +NEA+G+ +K + + N+++ L N G EA +L + M K L
Sbjct: 370 GETNRALALFNEALGK--GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE-----KGL 422
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +FN++ +G C G DA + + M PD +FN LI + A E
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ M D GV+PD YTY L++ + ++ +D ++ MV+ G PNL +N L+ L
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLD 280
+ LDEA + M K + D ++ ++ G LD
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 139/361 (38%), Gaps = 80/361 (22%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D ++ M F + RL + + G + V Y +++ G++ + +
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQ--GCEMNVVAYCTVVGGFYEENFK 197
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E E + + + S+ +S N +L LC G E KL D++ P N
Sbjct: 198 AEGYELFGKMLASGVSLCLSTF--NKLLRVLCKKGDVKECEKLLDKVIKRGVLP-----N 250
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L ++N+ G C +G A+ + + E PD +++NNLI LCKN EAE G
Sbjct: 251 LFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLG 310
Query: 184 EMSDKGVNPDEYTY-----------------------------------GLLMDACFEVN 208
+M ++G+ PD YTY L+D
Sbjct: 311 KMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG 370
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF---------------FD 253
+ F + + G++PN+ +YN L+ L GM+ EA F+
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFN 430
Query: 254 IMVKKL-KM--------------------DDASYKFMMKALSDGGKLDEILEIVGGILDD 292
I+V L KM D ++ ++ S K++ LEI+ +LD+
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN 490
Query: 293 G 293
G
Sbjct: 491 G 491
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 121/260 (46%), Gaps = 9/260 (3%)
Query: 35 ELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL 94
+++E +G + +GV G+ MK Y KG +EA+ + + + + + N+++ L
Sbjct: 65 DMRENVGNHMLEGVYVGA-MKNYGRKGKVQEAVNVFERM--DFYDCEPTVFSYNAIMSVL 121
Query: 95 CNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
++G FD+A K++ RM++ P ++ SF + +C R A+ + M
Sbjct: 122 VDSGYFDQAHKVYMRMRDRGITP-----DVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C + +++ ++ + AE EL+G+M GV+ T+ L+ + V +
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
K++ G+ PNL YN + L Q G LD A ++++ K D +Y ++ L
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 274 SDGGKLDEILEIVGGILDDG 293
K E +G ++++G
Sbjct: 297 CKNSKFQEAEVYLGKMVNEG 316
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 119/265 (44%), Gaps = 41/265 (15%)
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+E +N ++ + K + SV++ L GKF+ ++ M+ V +
Sbjct: 22 KALEMFN-SMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYV 80
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
G+ Y +G+ ++A+ VF +M Y C P S+N ++ L +G +A ++Y
Sbjct: 81 GAMK----NYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR 136
Query: 185 MSDKGVNPDEYTYGLLMDA-C----------------------------------FEVNR 209
M D+G+ PD Y++ + M + C +E N
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKF 268
+G F KM+ SG+ L+ +N+L+ L + G + E + D ++K+ + + +Y
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 269 MMKALSDGGKLDEILEIVGGILDDG 293
++ L G+LD + +VG +++ G
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQG 281
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 85/219 (38%), Gaps = 37/219 (16%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
DP VY+Y L+ G + + V ++ + EK G + + L++ +E
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK--GCAPNLFTFNILLESLCRYRKLDE 549
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH-----NPPKRL 120
A+ E +N SV AV +++D C NG D A LF +M+ + P +
Sbjct: 550 ALGLLEEM--KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNI 607
Query: 121 AVN----------------------LG----SFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
++ LG ++ +M DG+C G + +M E
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPD 193
P + +I+ LC + EA + M KG+ P+
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 134/292 (45%), Gaps = 10/292 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V +P YS LM GF + G F+++E +K G+V + Y L+ Y GM +
Sbjct: 223 GLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKR--SGIVPNAYAYNCLISEYCNDGMVD 280
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + + E + + N ++ LC KF EA+KL ++ P N+
Sbjct: 281 KAFKVFAEM--REKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP-----NI 333
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N++ +G+C + A+ +F ++ SP +++N LI K LA A +L E
Sbjct: 334 VTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKE 393
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++ + P + TY +L+DA +N + M SGL P++ Y+ L+ L G
Sbjct: 394 MEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGN 453
Query: 245 LDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+ EA F + + L+ + Y M+ G L ++ ++ G +
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMV 505
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 119/239 (49%), Gaps = 9/239 (3%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
+Y +++ Y ++A+ + + E V +S NN +L L + FD+A +F+
Sbjct: 91 LYDTVVNAYVHSHSTDQALTFLHHMIHE-GHVPLSNTFNN-LLCLLIRSNYFDKAWWIFN 148
Query: 109 RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
+K+ ++ ++ SF +M G C G F + + E+ SP+ + + LID
Sbjct: 149 ELKS------KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDG 202
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
CK+G + A+ L+ +M+ G+ P+ +TY +LM+ F+ +G + M SG+ PN
Sbjct: 203 CCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPN 262
Query: 229 LAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
YN L+ + GM+D+A K F ++ K + +Y ++ L G K E +++V
Sbjct: 263 AYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV 321
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKG---- 56
M +G V ++ L+ +R D + +F ELK K VV D +G ++KG
Sbjct: 115 MIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSK---VVLDAYSFGIMIKGCCEA 171
Query: 57 -YFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
YF+KG AM E G + +V V +++D C +G A LF +M
Sbjct: 172 GYFVKGFRLLAML---EEFGLSPNV----VIYTTLIDGCCKDGNVMLAKNLFCKMNR--- 221
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
L N +++V+ +G+ QG ++ +++ M P+ ++N LI + C +GM+
Sbjct: 222 --LGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMV 279
Query: 176 AEAEELYGEMSDKGV-----------------------------------NPDEYTYGLL 200
+A +++ EM +KG+ +P+ TY +L
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNIL 339
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV----GMLDEAK 249
++ +V ++D F ++ SGL P L YN L+ +V G LD K
Sbjct: 340 INGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVK 392
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 108/235 (45%), Gaps = 10/235 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ L+ GF D RLF +LK G+ V Y +L+ GY
Sbjct: 328 GLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKS--SGLSPTLVTYNTLIAGYSKVENLA 385
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ E E + S V ++DA ++A ++ M+ L ++
Sbjct: 386 GALDLVKEM--EERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKS-----GLVPDV 438
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++V+ G C G K+A ++F+ +GE P+++ +N +I CK G A L E
Sbjct: 439 YTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNE 498
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
M G+ P+ ++ + + + +M++SGL+P++++Y ++V K+
Sbjct: 499 MVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY-KMVHKV 552
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 152/314 (48%), Gaps = 16/314 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE-KLGGVVSDGVVYGSLMKGYFMKGME 63
GF D V Y+ L+ + G S E LKE + G V Y SL+ Y G+
Sbjct: 321 GFSPDKVTYNALLDVY---GKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLL 377
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EAME ++ V + +K ++L GK D A+K+F+ M+ P N
Sbjct: 378 DEAMELKSQMVKKG--IKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQP-----N 430
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +FN + + +G F + ++VF ++ C PD +++N L+ +NGM +E ++
Sbjct: 431 ICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFK 490
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G P+ T+ L+ A D +R+M+D+G+ P+L+ YN ++ L + G
Sbjct: 491 EMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGG 550
Query: 244 MLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEIL----EIVGGILDDGGIEFS 298
+ +++ K ++ + K ++ +Y ++ A ++G +++ + EI GI++ +
Sbjct: 551 LWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLK 610
Query: 299 EELQEFVKGELSKE 312
+ + K +L E
Sbjct: 611 TLVLVYSKSDLLTE 624
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 7/211 (3%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
N V + A S++ A +NG++ EA+ +F +++ E P L ++NV+ + Y
Sbjct: 213 NDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRP-----TLITYNVILNVYGK 267
Query: 137 QGRFKDAIE-VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
G I + M +PD ++N LI + + EA E++ EM G +PD+
Sbjct: 268 MGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKV 327
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
TY L+D + R + ++M SG P++ YN L+ + G+LDEA M
Sbjct: 328 TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM 387
Query: 256 VKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
VKK +K D +Y ++ GK D +++
Sbjct: 388 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMKV 418
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+L ++N + Y F+ + ++ R++ PD +SFN +I C+NG + EA ++
Sbjct: 675 SLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIF 734
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM D G+ PD TY + + + + + M+ +G +PN YN L+ ++
Sbjct: 735 AEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKL 794
Query: 243 GMLDEAKSF 251
DEA SF
Sbjct: 795 NRRDEASSF 803
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 9/190 (4%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
R F EL+E+ G D +++ Y + M + E N ++S S NS+
Sbjct: 627 RAFLELREQ--GFSPDITTLNAMVSIYGRRRMVSKTNEILN--FIKDSGFTPSLTTYNSL 682
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ F+++ + + + P ++ SFN + YC GR K+A +F +M
Sbjct: 683 MYMYSRTEHFEKSEDILREIIAKGMKP-----DIISFNTVIFAYCRNGRMKEASRIFAEM 737
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
++ +PD +++N I + M EA ++ M G P++ TY L+D ++NR
Sbjct: 738 KDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRR 797
Query: 211 DDGATYFRKM 220
D+ +++ +
Sbjct: 798 DEASSFISNL 807
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 11/247 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNG-KF 100
GV D Y SL+ Y G EA+ + + E + + + N +L+ G +
Sbjct: 215 GVHIDIYAYTSLITAYASNGRYREAVMVFKKL--EEEGCRPTLITYNVILNVYGKMGMPW 272
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR-FKDAIEVFRKMGEYRCSPDT 159
+ L D MK+ P +L ++N + C +G +++A EVF +M SPD
Sbjct: 273 SKIAGLVDSMKSSGVAP-----DLYTYNTLISS-CRRGSLYEEAAEVFEEMKAAGFSPDK 326
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
+++N L+D K+ EA E+ EM G P TY L+ A +D+ +
Sbjct: 327 VTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQ 386
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGK 278
MV G++P++ Y L+ + G D A F+ M V + + ++ ++K + G
Sbjct: 387 MVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGN 446
Query: 279 LDEILEI 285
E++++
Sbjct: 447 FVEMMKV 453
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/290 (18%), Positives = 116/290 (40%), Gaps = 10/290 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ ++ R G + ++ E+K+ G + + Y SL+ Y
Sbjct: 527 MLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKD--GRCKPNELTYCSLLHAY-AN 583
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E E M E + + ++ AV +++ + E + F ++ + P
Sbjct: 584 GKEVERMSALAEEI-YSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSP--- 639
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + N M Y + E+ + + +P ++N+L+ + ++E+
Sbjct: 640 --DITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSED 697
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ E+ KG+ PD ++ ++ A R+ + + F +M D GL P++ YN +
Sbjct: 698 ILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYA 757
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
M EA M+K K + +Y ++ + DE + +
Sbjct: 758 SDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNL 807
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+I L K G + A L ++ + GV+ D Y Y L+ A R + F+K+ + G
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250
Query: 225 LRPNLAVYNRLVGKLVQVGM 244
RP L YN ++ ++GM
Sbjct: 251 CRPTLITYNVILNVYGKMGM 270
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ KG D + ++ ++ + R+G R+F E+K+ G+ D + Y + + Y
Sbjct: 702 IIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKD--FGLAPDVITYNTFIASYASD 759
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN 112
M EA++ + + K + NS++D C + DEA ++N
Sbjct: 760 SMFIEAIDVVKYMI--KNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLRN 809
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 149/323 (46%), Gaps = 12/323 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + D Y++L+ R G+ +L ++++E G ++ V Y SL++G M
Sbjct: 123 MIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEY--GYPTNTVTYNSLVRGLCMH 180
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++++ + + + +A + +L+A DEA KL D + + P
Sbjct: 181 GNLTQSLQLLDRLI--QKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEP--- 235
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL S+NV+ G C +GR +DAI +FR++ SP+ +S+N L+ LC G EA
Sbjct: 236 --NLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANV 293
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM+ +P TY +L+ + R + +M+ + +P + YN ++ L
Sbjct: 294 LLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLC 353
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G LD D +M + ++ +Y + L + G + E I+ L + ++
Sbjct: 354 KDGKLDLVVKCLDQMMYRHCNPNEGTYN-AIATLCEEGMVQEAFSIIQS-LGNKQHSSTQ 411
Query: 300 ELQEFVKGELSKEGREEEVVKLM 322
E + V L ++G +L+
Sbjct: 412 EFYKIVITSLCRKGNTYPAFQLL 434
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 147/351 (41%), Gaps = 31/351 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ KG + V Y+ L+ G ++G ++ RLF EL K G + V Y L++ +
Sbjct: 228 IIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSK--GFSPNVVSYNILLRSLCNE 285
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA E G+ S S V N ++ +L +G+ + AL++ + M R
Sbjct: 286 GRWEEANVLLAEMNGDERSP--STVTYNILIGSLALHGRTEHALEVLEEMIR-----ARF 338
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
S+N + C G+ ++ +M C+P+ ++N I LC+ GM+ EA
Sbjct: 339 KPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFS 397
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ + +K + + Y +++ + +M G P+ Y+ L+ L
Sbjct: 398 IIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLC 457
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLD---EILEIVGGILDDGGIEF 297
GML+EA F +M + K D +Y ++ + D ++ EI+ G
Sbjct: 458 MEGMLNEAIEIFSVMEENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVG--------- 508
Query: 298 SEELQEFVKGELSKEGREEEVVK-LMEKKEREKAEAKAREAEAAEAAKRSA 347
KG L E +V+ ++ +KE + A RE + + +S
Sbjct: 509 --------KGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQST 551
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 100/240 (41%), Gaps = 45/240 (18%)
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCK----------------------- 171
C + + AI+V M PD S+ L+ LC+
Sbjct: 108 CKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNT 167
Query: 172 ------------NGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
+G L ++ +L + KG+ P+ YTY L++A ++ D+ + +
Sbjct: 168 VTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDE 227
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGK 278
++ G PNL YN L+ L + G ++A F ++ K + SY ++++L + G+
Sbjct: 228 IIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGR 287
Query: 279 LDE----ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKA 334
+E + E+ G + ++ + G L+ GR E ++++E+ R + + A
Sbjct: 288 WEEANVLLAEMNGDERSPSTVTYN-----ILIGSLALHGRTEHALEVLEEMIRARFKPTA 342
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 2/184 (1%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
R DA M E PD L+ LCK + +A ++ M G+ PD +Y
Sbjct: 77 RLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYT 136
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
L+ + V KM + G N YN LV L G L ++ D +++K
Sbjct: 137 FLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQK 196
Query: 259 LKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+ +A +Y F+++A DE +++ I+ GG + G L KEGR E+
Sbjct: 197 GLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTG-LCKEGRTED 255
Query: 318 VVKL 321
++L
Sbjct: 256 AIRL 259
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 15/290 (5%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
A + Y+ L+ GF + L EL + GGVV+ Y ++ F KG EA
Sbjct: 169 ASFITYNILVDGFCKADRVPEAVELLNELVAR-GGVVTSAP-YNCIIDTLFKKGKIHEAE 226
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+N E V+ V ++D LC + A ++F P + +
Sbjct: 227 LFFNRM--EKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICS---- 280
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ DG+C G +A +F M C+P+ +S N LI+ LCK L++A E++ E+
Sbjct: 281 -CLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVK 339
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+ PD TY MD +RVD +VD G P++ +Y L+ L +G LDE
Sbjct: 340 RQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDE 399
Query: 248 AKSFFDIMVKKLKMDDASYKFMMKALSDG----GKLDEILEIVGGILDDG 293
A+ F++ ++ A F L +G G+LDE E+ ++ G
Sbjct: 400 ARKVFEVDMRAAGC--APNNFTCNVLVNGFGLAGRLDEARELFQRFVERG 447
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +D+LC + D+A F +K+ R VN S+N++ + +C R +AI++F
Sbjct: 70 NITIDSLCKSDMIDKAESWFQELKD-----FRGLVNTVSYNILINAFCKTKRIDEAIQLF 124
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M C+P T ++N LI LC+ L EA++ Y + G TY +L+D +
Sbjct: 125 GEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKA 184
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
+RV + ++V G A YN ++ L + G + EA+ FF+ M K ++ + ++
Sbjct: 185 DRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTF 244
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGG 294
++ L ++ EI L+ GG
Sbjct: 245 TVLIDGLCKANRVARAKEIFFSYLESGG 272
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 114/245 (46%), Gaps = 14/245 (5%)
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHN--PPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
N ++ LC+ GK DEAL+LF + ++ P L L GR ++ +
Sbjct: 2 NADIVLCLCHVGKLDEALELFHSLVSDGCGLPADLLVRELSK----------AGRAEECL 51
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
+V + M + + + N ID LCK+ M+ +AE + E+ D + +Y +L++A
Sbjct: 52 KVVKLMLDRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAF 111
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDD 263
+ R+D+ F +M G P+ + YN L+G L +V L EA+ F++ ++
Sbjct: 112 CKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASF 171
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+Y ++ ++ E +E++ ++ GG+ S + L K+G+ E
Sbjct: 172 ITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIID-TLFKKGKIHEAELFFN 230
Query: 324 KKERE 328
+ E++
Sbjct: 231 RMEKD 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 10/188 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V+ S LM GF + G D +R+FE + + G + V L+ G +A E +
Sbjct: 277 VICSCLMDGFCKYGGVDEAWRIFELMTNR--GCTPNDVSCNILINGLCKAKRLSQAREVF 334
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E V + K V ++ +D LC + D+A ++ + ++ P ++ + +
Sbjct: 335 EEVVKRQA--KPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTP-----DVVMYTAL 387
Query: 131 ADGYCGQGRFKDAIEVFR-KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
G C GR +A +VF M C+P+ + N L++ G L EA EL+ ++G
Sbjct: 388 ISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERG 447
Query: 190 VNPDEYTY 197
V PD T+
Sbjct: 448 VQPDCRTF 455
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 164/332 (49%), Gaps = 17/332 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V + V Y+ ++LG R G+ D +F ++ + + + V Y L+ G F K
Sbjct: 495 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLAR--DLKPNVVTYSILIDGNFKK 552
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN---EHNPP 117
G E+A++ +++ + N + + N++++ LC G+ EA D++KN E P
Sbjct: 553 GDSEKALDLFDQMLSLN--IAPTDFTFNTIINGLCKVGQMSEAR---DKLKNFLEEGFIP 607
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+ ++N + DG+ +G A+ V+R+M E+ SP+ +++ +LI+ CK+ +
Sbjct: 608 SCM-----TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDL 662
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A + EM +KG+ D Y L+D + ++ F ++++ GL PN VYN ++
Sbjct: 663 ALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMIS 722
Query: 238 KLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+ ++ A ++ M+ ++ D +Y ++ L G+L ++ +L G +
Sbjct: 723 GFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 782
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
V G L +G+ E K++E+ +R+
Sbjct: 783 DIITFHVLVNG-LCNKGQLENARKILEEMDRK 813
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 135/307 (43%), Gaps = 48/307 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V YS L+ G G+ + L+ ++K L G+ SL++GY + E
Sbjct: 395 GLFPNKVTYSVLIEGCCNSGNIEKASELYTQMK--LNGIPPSVFNVNSLLRGYLKAPLWE 452
Query: 65 EAMECYNEAVGENSSVKMSAVAN----NSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
EA + ++EAV VAN N ++ LC GK DEA L D M N+ P
Sbjct: 453 EASKLFDEAVD-------CGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVV 505
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ L N+ +++++ DG +G + A+++F +M
Sbjct: 506 SYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 565
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+P +FN +I+ LCK G ++EA + ++G P TY ++D + +
Sbjct: 566 LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI 625
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
D +R+M + G+ PN+ Y L+ + +D A D M +K L++D +Y
Sbjct: 626 DSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY--- 682
Query: 270 MKALSDG 276
AL DG
Sbjct: 683 -SALIDG 688
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 128/268 (47%), Gaps = 10/268 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF+ + Y+ ++ GF+++G+ D ++ E+ E GV + V Y SL+ G+
Sbjct: 603 EGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCE--FGVSPNVVTYTSLINGFCKSNRI 660
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A++ +E +++ A ++++D C + A LF + P R+
Sbjct: 661 DLALKTRDEM--REKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV-- 716
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+N M G+ + A+ ++KM R D ++ LID L K G L A +LY
Sbjct: 717 ---YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYM 773
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KG+ PD T+ +L++ ++++ +M + P++ +YN L+ + G
Sbjct: 774 EMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREG 833
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMM 270
L EA + D M+ + L DD +Y ++
Sbjct: 834 NLKEAFTLHDEMLDRGLVPDDVTYDILI 861
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 121/275 (44%), Gaps = 7/275 (2%)
Query: 37 KEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCN 96
K L G+ D +++ +G EEA E + E + VK+ A A + ++ A+C
Sbjct: 250 KMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRET--KERGVKLDAGAYSIIIQAVCK 307
Query: 97 NGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
+ L+L + MK P +F + QG +A+ + +M
Sbjct: 308 KPNSNLGLELLEEMKERGWVPSE-----ATFTSVIVACVAQGNMVEALRLKEEMINCGKP 362
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
+ + +L+ C G L A L+ ++++ G+ P++ TY +L++ C ++ +
Sbjct: 363 MNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASEL 422
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG 276
+ +M +G+ P++ N L+ ++ + +EA FD V + +Y MM L G
Sbjct: 423 YTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKG 482
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSK 311
GK+DE ++ +++ G + + + G K
Sbjct: 483 GKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRK 517
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
FN + + Y R ++AI+ F M P N L+ L + M+ E +LY +M
Sbjct: 193 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 252
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+G+ D +T +++ AC + RV++ YFR+ + G++ + Y+ ++
Sbjct: 253 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIII 302
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 6/207 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +L+A + + A+ F+ M + P +N+ ++ G+ R +++
Sbjct: 194 NYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR-----DLY 248
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
KM D + + ++ K G + EAEE + E ++GV D Y +++ A +
Sbjct: 249 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 308
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK-MDDASY 266
+ G +M + G P+ A + ++ V G + EA + M+ K M+
Sbjct: 309 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 368
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDG 293
+MK G LD L + I +DG
Sbjct: 369 TSLMKGYCAQGNLDSALNLFNKITEDG 395
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 144/295 (48%), Gaps = 17/295 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGM 62
+G + + V YS L+ G + + D R+ L++ +G GV + + Y L+ GY GM
Sbjct: 253 QGIMPNVVTYSSLINGLCKTKEMDKAERV---LRQMVGAGVRPNNMTYNCLIHGYSTSGM 309
Query: 63 EEEAMECYNEAVGENSSVKMSAVAN-NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
+E++ + E +SS+ + V N NS + ALC +G+ EA +FD M + P
Sbjct: 310 WKESVRVFKEM---SSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKP---- 362
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ S+ + GY G +F M PD FN LI+ + GM+ ++ +
Sbjct: 363 -DVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 421
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ +M+ +GVNPD T+ ++ A + R+DD F M+D+G+ P+ AVY+ L+
Sbjct: 422 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 481
Query: 242 VGMLDEAKSFFDIMVKKLKMDDASYKF---MMKALSDGGKLDEILEIVGGILDDG 293
L +AK M+ K + KF ++ L G++ E ++V I+ G
Sbjct: 482 RRDLVKAKELISDMLSK-GIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 535
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 147/308 (47%), Gaps = 12/308 (3%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
A P +Y+Y +L + R D +F L G+ D Y +L+ G+ +G ++
Sbjct: 185 AAPTIYTYNILINCYRRARRPDLGLPVFGRLLRT--GLGPDVFSYNALIDGFSKEGEVDK 242
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A + + + E + + V +S+++ LC + D+A ++ +M P +
Sbjct: 243 AHDLFYKM--EEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNM----- 295
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + GY G +K+++ VF++M PD + N+ + LCK+G + EA +++ M
Sbjct: 296 TYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSM 355
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
KG PD +YG L+ + F MV G+ P+ V+N L+ ++GM+
Sbjct: 356 VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMM 415
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
D++ F+ M K+ + D ++ ++ A G+LD+ +E ++D G +
Sbjct: 416 DKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCL 475
Query: 305 VKGELSKE 312
++G+ ++
Sbjct: 476 IQGQCNRR 483
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 156/367 (42%), Gaps = 37/367 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D V++ L+ + R G D +FE++ ++ GV D + + +++ +
Sbjct: 390 MVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQ--GVNPDIITFSTVISAFCRL 447
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-- 118
G ++AME +N + ++ V + ++ CN +A +L M ++ PP
Sbjct: 448 GRLDDAMEKFNHMI--DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCI 505
Query: 119 --------------RLA---------------VNLGSFNVMADGYCGQGRFKDAIEVFRK 149
R+A NL +FN + DGYC G K+A+ +
Sbjct: 506 KFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDS 565
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M PD ++N L+D CK+G + +A L+ +M K V +Y +++ F+ R
Sbjct: 566 MESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 625
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKF 268
F +M++SG+ ++ Y ++G L + DEA + + +K D ++
Sbjct: 626 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNI 685
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
+++A+ G+ E E+ I G + + + L KE E+ L E+
Sbjct: 686 VIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITN-LIKEESFEDADNLFSSMEKS 744
Query: 329 KAEAKAR 335
+R
Sbjct: 745 SCTPDSR 751
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 43/275 (15%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
+ + SL+ GY + G +EA+ + E+ V+ N+++D C +G+ D+AL LF
Sbjct: 541 ITFNSLVDGYCLVGNMKEAVGLLDSM--ESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 598
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY-------------- 153
M + KR+ + S+N++ G R A E+F +M E
Sbjct: 599 RDMLH-----KRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLG 653
Query: 154 -----RCSP----------------DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
C+ D L+FN +I + K G EA+EL+ +S G+ P
Sbjct: 654 GLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVP 713
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
TY +++ + +D F M S P+ + N ++ L+ G + +A ++
Sbjct: 714 TILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYL 773
Query: 253 DIMVKKLKMDDASYKFMMKAL-SDGGKLDEILEIV 286
+ KK + +A+ ++ L S GK E ++++
Sbjct: 774 SKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 808
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 12/312 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGM 62
KGFV D + L+ G G D FR+ KE LG G V D V Y +L+ G K
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRI---QKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+EA +E V +K + ++ L N K +EA++ +D K P
Sbjct: 556 LDEAFMFLDEMV--KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP----- 608
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ +++VM DG C R ++ E F +M P+T+ +N+LI C++G L+ A EL
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M KG++P+ TY L+ ++RV++ F +M GL PN+ Y L+ ++
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 243 GMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G + + + ++ K + + +Y M+ + G + E ++ + + G + S
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Query: 302 QEFVKGELSKEG 313
+EF+ G L + G
Sbjct: 789 KEFIYGYLKQGG 800
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 154/340 (45%), Gaps = 11/340 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG Y+ L+ G+ ++G +D RL +E+ +G V+ G + S++
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS-IGFNVNQGS-FTSVICLLCSH 448
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M + A+ E + N S + +++ LC +GK +AL+L+ + N K
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLT--TLISGLCKHGKHSKALELWFQFLN-----KGF 501
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
V+ + N + G C G+ +A + +++ C D +S+N LI C L EA
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
EM +G+ PD YTY +L+ F +N+V++ ++ +G+ P++ Y+ ++
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ +E + FFD +M K ++ + Y +++A G+L LE+ + G S
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
+KG +S R EE L E+ E E A
Sbjct: 682 TYTSLIKG-MSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 720
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S N +L +L +F + + FD + +P L F + +C G+ ++
Sbjct: 225 SKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYL------FTTAINAFCKGGKVEE 278
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+++F KM E +P+ ++FN +ID L G EA +M ++G+ P TY +L+
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
R+ D ++M G PN+ VYN L+ ++ G L++A D+MV K L +
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++Y ++K G+ D ++ +L G
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 10/250 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D YS L+ G + + +++ K G++ D Y ++ G
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR--NGMLPDVYTYSVMIDGCCKA 623
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EE E ++E + +N V+ + V N ++ A C +G+ AL+L + MK++ P
Sbjct: 624 ERTEEGQEFFDEMMSKN--VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP--- 678
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++ + G R ++A +F +M P+ + LID K G + + E
Sbjct: 679 --NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV-GKL 239
L EM K V+P++ TY +++ V + + +M + G+ P+ Y + G L
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 796
Query: 240 VQVGMLDEAK 249
Q G+L+ K
Sbjct: 797 KQGGVLEAFK 806
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 138/319 (43%), Gaps = 12/319 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + L+ VR + F+ + + GV D ++ + + + G
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK---GVSPDVYLFTTAINAFCKGGKV 276
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EEA++ +++ E + V + V N+V+D L G++DEA ++M P
Sbjct: 277 EEAVKLFSKM--EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP-----T 329
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +++++ G R DA V ++M + P+ + +NNLID + G L +A E+
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M KG++ TY L+ + + D+ ++M+ G N + ++ L
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
M D A F +++++ + ++ L GK + LE+ L+ G + +
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 303 EFVKGELSKEGREEEVVKL 321
+ G L + G+ +E ++
Sbjct: 510 ALLHG-LCEAGKLDEAFRI 527
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 13/285 (4%)
Query: 7 VADPVVYSYLMLGFVRDG-DSDGVFR--LFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
V D V Y+ ++ R G D R L + +E + V Y ++M+G
Sbjct: 80 VRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRT 139
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA+ + S V+ V +++ LC+ + D AL+L D M P N
Sbjct: 140 GEAVALLRSM--QASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQP-----N 192
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + GYC GR++D +VF M PD + F LID LCK G +A ++
Sbjct: 193 VVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKD 252
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +G+ P+ TY +L+++ + V + T ++M D G+ P++ YN L+ L V
Sbjct: 253 MMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVL 312
Query: 244 MLDEAKSFFDIMVK---KLKMDDASYKFMMKALSDGGKLDEILEI 285
+DEA SF + M++ ++ D ++ ++ L G++ + +++
Sbjct: 313 EMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKV 357
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 139/321 (43%), Gaps = 36/321 (11%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + VVYS L+ G+ R G V ++FE++ + G+ D +++ L+ +G
Sbjct: 188 GVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRR--GIKPDVIMFTGLIDDLCKEGKTG 245
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN- 123
+A + + V ++ + V N ++++LC G EAL L M ++ P + N
Sbjct: 246 KAAKVKDMMV--QRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNT 303
Query: 124 -------------------------------LGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
+ +FN + G C GR A++V M E
Sbjct: 304 LIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAE 363
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
C + +++N LI + + A L E++ G+ PD +TY +L++ ++ VD
Sbjct: 364 RGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDR 423
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKA 272
+ M G++ L Y L+ + Q GM++ A F+ M K +D +Y M+
Sbjct: 424 AEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYSTMIHG 483
Query: 273 LSDGGKLDEILEIVGGILDDG 293
G + + +++ +LD+G
Sbjct: 484 ACKSGDMKTVKQLIQDMLDEG 504
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 110/233 (47%), Gaps = 20/233 (8%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V ++ ++ G + G ++ E + E+ G + + V Y L+ G+ + AM
Sbjct: 334 DVVTFNSVIHGLCKIGRMTQAVKVREMMAER--GCMCNLVTYNYLIGGFLRVHKVKMAMN 391
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNG-----KFDEALKLFDRMKNEHNPPKRLAVN 123
+E + +S + +S ++ NG + D A K M+ + +
Sbjct: 392 LMDE-------LAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQ-----RGIKAE 439
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L + + C QG + A+ +F +M + C D ++++ +I CK+G + ++L
Sbjct: 440 LFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQ 498
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+M D+G+ PD TY +L++ ++ +++ ++M SG P++AV++ L+
Sbjct: 499 DMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLI 551
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + + V Y+YL+ GF+R L +EL + G+ D Y L+ G F K E
Sbjct: 364 RGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDEL--AISGLEPDSFTYSILING-FSKMWE 420
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ E + + + +K +L A+C G + A+ LF+ M K ++
Sbjct: 421 VDRAEKFLCTMRQR-GIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD------KNCGLD 473
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++ M G C G K ++ + M + +PD ++++ LI+ K G L EAE +
Sbjct: 474 AIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLK 533
Query: 184 EMSDKGVNPD 193
+M+ G PD
Sbjct: 534 QMTASGFVPD 543
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 139/292 (47%), Gaps = 10/292 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ +M F ++G+ +F+ + + G+ V + +LM GY G +
Sbjct: 131 GYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITK--WGLRPSVVSFNTLMNGYIRLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E ++ S V+ + +++ LC K DEA +LF+ M + + L N
Sbjct: 189 EGFRL--KSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLD-----RGLVPNG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + D +C G A+E++++M SPD +++N LI LCK G L + L E
Sbjct: 242 VTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS G+ PD+ TY L+D C + ++ + ++M+ +R + Y LV L Q G
Sbjct: 302 MSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGR 361
Query: 245 LDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
D+A K F +++ LK D+ +Y ++ G + ++ + DG +
Sbjct: 362 ADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHV 413
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 9/227 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF E+ ++ G+V +GV + +L+ +
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDR--GLVPNGVTFTTLIDVHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM + AME Y + + + S + + N+++ LC G + L D M P ++
Sbjct: 255 GMVDSAMEIYKQMLSQGFSPDL--ITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ L+ LC+ G +AE+
Sbjct: 313 -----TYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
++ EM G+ PD TY ++++ + V + ++M G P
Sbjct: 368 MFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVP 414
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
SD V+ LM Y G +A++C+ V FD
Sbjct: 64 SDIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVP------------------FDTCR 105
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-PDTLSFN 163
K+ + + + L F ++ D Y K+ +E C P +L F
Sbjct: 106 KVLEHL-----------MKLKYFKLVWDFY------KEILE---------CGYPASLYFF 139
Query: 164 NLI-DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
N++ + CK G + A+ ++ ++ G+ P ++ LM+ + +D+G M
Sbjct: 140 NIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHA 199
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
SG++P++ Y+ L+ L + +DEA F+ M+ + L + ++ ++ G +D
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDS 259
Query: 282 ILEIVGGILDDGGIEFSEELQEF---VKGELSKEGREEEVVKLME 323
+EI +L G FS +L + + G L K+G ++V L++
Sbjct: 260 AMEIYKQMLSQG---FSPDLITYNTLIYG-LCKKGDLKQVRALID 300
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 162/334 (48%), Gaps = 20/334 (5%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFE---ELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
F A+ ++ L+L +V + + F+ + + KL V+S + +L+K G+
Sbjct: 156 FCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLS-VLSCNPLLSALVKENEFGGV 214
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
E E + N + N+V++ LC GK ++A + D MK P
Sbjct: 215 EFVYKEMIRRKISPN------LITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWP----- 263
Query: 123 NLGSFNVMADGYCGQGR---FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ ++N + DGYC GR A + ++M E + SP++++FN LID CK+ L+ A
Sbjct: 264 NVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAAL 323
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+++ EM +G+ P TY L++ ++++ +M+ S L+PN+ YN L+
Sbjct: 324 KVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGY 383
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ +L+EA+ FD + K+ L + ++ ++ GK++E + +L+ G + +
Sbjct: 384 CKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNA 443
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
+ G +EG+ EEV L+ + + +A
Sbjct: 444 STYNCLIVG-FCREGKMEEVKNLLNEMQCRGVKA 476
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 159/350 (45%), Gaps = 45/350 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVS-DGVVYGSLMKGYFM 59
M V GF + V Y+ L+ G+ + G +++ LKE + VS + V + L+ G+
Sbjct: 256 MKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCK 315
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
A++ + E ++ +K + V NS+++ LCN GK +EA L D M + + P
Sbjct: 316 DENLSAALKVFEEM--QSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP-- 371
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA- 178
N+ ++N + +GYC + ++A E+F +G+ +P+ ++FN L+ CK G + EA
Sbjct: 372 ---NVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF 428
Query: 179 ----------------------------------EELYGEMSDKGVNPDEYTYGLLMDAC 204
+ L EM +GV D TY +L+ A
Sbjct: 429 LLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAW 488
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD- 263
E A +M+D GL+P+ YN L+ G L A + M K+ + +
Sbjct: 489 CEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANV 548
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
+Y +++ GKL++ ++ +L+ G I + E +K E+ ++G
Sbjct: 549 VTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIP-NRTTYEIIKEEMMEKG 597
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 125/310 (40%), Gaps = 79/310 (25%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
+ V ++ L+ GF +D + ++FEE++ + G+ V Y SL+ G +G EA
Sbjct: 301 PNSVTFNVLIDGFCKDENLSAALKVFEEMQSQ--GLKPTVVTYNSLVNGLCNEGKLNEAK 358
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+E + N +K + + N++++ C +EA +LFD + + P N+ +F
Sbjct: 359 VLLDEMLSSN--LKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTP-----NVITF 411
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGE---------YRC----------------------- 155
N + GYC G+ ++A + + M E Y C
Sbjct: 412 NTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQC 471
Query: 156 ---SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVN--- 208
DT+++N LI C+ +A L EM DKG+ P TY +L++ C E N
Sbjct: 472 RGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRA 531
Query: 209 -------------------------------RVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
+++D +M++ GL PN Y +
Sbjct: 532 ALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKE 591
Query: 238 KLVQVGMLDE 247
++++ G L +
Sbjct: 592 EMMEKGFLPD 601
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF+ + Y+ L++GF R+G + V L E++ + GV +D V Y L+ + K
Sbjct: 434 MLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCR--GVKADTVTYNILISAWCEK 491
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A +E + + +K S + N +L+ C G AL L +M+ E R
Sbjct: 492 KEPKKAARLIDEML--DKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKE----GRW 545
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE- 179
A N+ ++NV+ GYC +G+ +DA + +M E P+ ++ + +++ + G L + E
Sbjct: 546 A-NVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEG 604
Query: 180 ELY 182
LY
Sbjct: 605 HLY 607
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 106 bits (265), Expect = 2e-20, Method: Composition-based stats.
Identities = 76/282 (26%), Positives = 131/282 (46%), Gaps = 10/282 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG AD Y+ + + S + L +++++++ + + V Y +L+ G+ +
Sbjct: 294 MICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEM--ISPNEVTYNTLINGFVKE 351
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A + +NE + + V N+++ C+ G F+EAL+L D M+ L
Sbjct: 352 GKIGVAAQVFNEM--SKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHME-----AAGL 404
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N ++ + +G C +F+ A + +M +++ LID LCKNGML EA +
Sbjct: 405 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 464
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L G M GVNPD TY L++ V + +M SGL N +Y+ L+
Sbjct: 465 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFC 524
Query: 241 QVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
Q G + EA + +M D + ++ +L GKL E
Sbjct: 525 QHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGE 566
Score = 99.8 bits (247), Expect = 2e-18, Method: Composition-based stats.
Identities = 75/287 (26%), Positives = 138/287 (48%), Gaps = 12/287 (4%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY+ M+ V+D ++ V+ LF E+ +K G+ + + L+ G ++G ++A
Sbjct: 196 PSVYTCNMILASMVKDKRTELVWSLFREMSDK--GICPNVGTFNILINGLCVEGNLKKAG 253
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + EN V + V N++L+ C G++ A++L D M K + ++ ++
Sbjct: 254 NLLKQ-MEENGFVP-TIVTYNTLLNWYCKKGRYKAAIELIDYMIC-----KGIEADVCTY 306
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
NV D C R A + +KM + SP+ +++N LI+ K G + A +++ EMS
Sbjct: 307 NVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSK 366
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
++P+ TY L+ V ++ M +GLR N Y L+ L + +
Sbjct: 367 FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFEL 426
Query: 248 AKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
AK + M V + + +Y ++ L G LDE +++VG + DG
Sbjct: 427 AKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 473
Score = 89.0 bits (219), Expect = 4e-15, Method: Composition-based stats.
Identities = 71/277 (25%), Positives = 126/277 (45%), Gaps = 9/277 (3%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
V+ L++ Y +GM + A+E + E VG K S N +L ++ + + + LF
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETF-ELVGL-VGFKPSVYTCNMILASMVKDKRTELVWSLFR 222
Query: 109 RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
M + K + N+G+FN++ +G C +G K A + ++M E P +++N L++
Sbjct: 223 EMSD-----KGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 277
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
CK G A EL M KG+ D TY + +D +R +KM + PN
Sbjct: 278 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 337
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVG 287
YN L+ V+ G + A F+ M K L + +Y ++ G +E L ++
Sbjct: 338 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLD 397
Query: 288 GILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
++ G+ +E + L K + E +L+E+
Sbjct: 398 H-MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLER 433
Score = 88.2 bits (217), Expect = 8e-15, Method: Composition-based stats.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V + + Y ++ G+ GD F F+++ + G YGSL+KG G
Sbjct: 578 GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIK--CGQHPSFFTYGSLLKGLCKGGNLV 635
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + N +V +V N++L C +G EA+ LFD+M + P
Sbjct: 636 EAKKFLNRLHYIPGAV--DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY---- 689
Query: 125 GSFNVMADGYCGQGRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++ + G C +G+ A+ +F MG P+ + + L+D L K G A +
Sbjct: 690 -TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 748
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KG PD + ++D+C ++ +F M G+ PNLA YN L+ +
Sbjct: 749 EMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 808
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L S + M+++ + D ++ ++ LS G D ++++G ++ +G
Sbjct: 809 ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEG 859
Score = 82.4 bits (202), Expect = 4e-13, Method: Composition-based stats.
Identities = 80/342 (23%), Positives = 142/342 (41%), Gaps = 36/342 (10%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G GD + RL + ++ G+ + V YG+L+ G K + E +
Sbjct: 374 VTYNALIGGHCHVGDFEEALRLLDHMEA--AGLRLNEVTYGTLLNG-LCKHEKFELAKRL 430
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPP------------ 117
E + N V + +A ++D LC NG DEA++L M K+ NP
Sbjct: 431 LERMRVNDMV-VGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 489
Query: 118 -----------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
L +N ++ + +C G +A++V+ M D
Sbjct: 490 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF 549
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+ N L+ LC++G L EAE+ MS G+ P+ TY +++ + + ++F M
Sbjct: 550 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM 609
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKL 279
+ G P+ Y L+ L + G L EAK F + + +D Y ++ G L
Sbjct: 610 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 669
Query: 280 DEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
E + + ++ + + S + G L ++G+ V L
Sbjct: 670 HEAVALFDKMVQNNVLPDSYTYSSLLTG-LCRKGKAVTAVCL 710
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 72/326 (22%), Positives = 134/326 (41%), Gaps = 11/326 (3%)
Query: 2 FVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
++ G V D V+Y+ L+ + G+ LF+++ + V+ D Y SL+ G KG
Sbjct: 646 YIPGAV-DSVMYNTLLAETCKSGNLHEAVALFDKMVQN--NVLPDSYTYSSLLTGLCRKG 702
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
A+ + A+G + + V ++D L G A F+ M + P +A
Sbjct: 703 KAVTAVCLFGTAMGRGTLFP-NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVA 761
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
FN + D +G+ A + F M + P+ ++N L+ K L L
Sbjct: 762 -----FNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSL 816
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
Y M +G+ PD+ T+ L+ + D G KM+ G + +N L+ K +
Sbjct: 817 YSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSE 876
Query: 242 VGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
G + +A + M + D +Y + L+ E ++ +L++G I +
Sbjct: 877 SGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQ 936
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKE 326
+ G + + G + KL ++ E
Sbjct: 937 YITLING-MCRVGDIQGAFKLKDEME 961
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 44/225 (19%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + Y L+ G R GD G F+L +E+ E LG +GS
Sbjct: 925 MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM-EALG--------FGS-------- 967
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
VA ++++ L + GK ++A+ + D M RL
Sbjct: 968 ----------------------HEVAESAMVRGLLHCGKTEDAMLVLDHMLR-----MRL 1000
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +F + +C + +A+++ M D +++N LI +C NG A A E
Sbjct: 1001 LPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFE 1060
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
LY EM + + P+ TY +L+DA N + G + + GL
Sbjct: 1061 LYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1105
Score = 52.4 bits (124), Expect = 4e-04, Method: Composition-based stats.
Identities = 59/288 (20%), Positives = 115/288 (39%), Gaps = 10/288 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V ++ ++ R G F ++ GV + Y L+ G+ K
Sbjct: 750 MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR--WWGVCPNLATYNILLHGFSKK 807
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ Y+ + E + + +S++ L +G D +KL +M E +
Sbjct: 808 QALLRYLSLYSTMMRE--GIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQF 865
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+FN++ + Y G+ + A ++ M PD ++N++ + L K E+
Sbjct: 866 -----TFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTV 920
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EM + GV P Y L++ V + +M G + + +V L+
Sbjct: 921 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 980
Query: 241 QVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVG 287
G ++A D M++ +L A++ +M K+ E L++ G
Sbjct: 981 HCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKG 1028
Score = 43.5 bits (101), Expect = 0.21, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 47/101 (46%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C+ F+ LI K GM+ A E + + G P YT +++ + + R +
Sbjct: 159 CNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 218
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+ FR+M D G+ PN+ +N L+ L G L +A + M
Sbjct: 219 SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQM 259
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 175/362 (48%), Gaps = 34/362 (9%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G A+ V ++ + ++ + V R +EL + + G D V Y +L+K Y G
Sbjct: 375 GVKANQVTHNISLKWLCKEEKREAVTRKVKELVD-MHGFSPDIVTYHTLIKAYLKVGDLS 433
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+E E +G+ +KM+ + N++LDALC K DEA L + + V+
Sbjct: 434 GALEMMRE-MGQKG-IKMNTITLNTILDALCKERKLDEAHNLLNSAHK-----RGFIVDE 486
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + G+ + + + A+E++ +M + + +P +FN+LI LC +G A E + E
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 185 MSDKGVNPDEYTY-GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+++ G+ PD+ T+ +++ C E RV+ ++ + + +P+ N L+ L + G
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKE-GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG 605
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEI------------------ 285
M ++A +FF+ ++++ ++D +Y M+ A KL E ++
Sbjct: 606 MTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNS 665
Query: 286 -VGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEAAEAAK 344
+ +++DG + ++EL + G+ R+ +V + E+ A ++++E EA
Sbjct: 666 FISLLMEDGKLSETDELLKKFSGKFGSMKRDLQV-----ETEKNPATSESKEELNTEAIA 720
Query: 345 RS 346
S
Sbjct: 721 YS 722
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE-KLGGVVSDGVVYGSLMKGYFMKGM 62
+GF+ D V Y L++GF R+ + +++E+K+ K+ VS + SL+ G G
Sbjct: 480 RGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVS---TFNSLIGGLCHHGK 536
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR-MKNEHNPPKRLA 121
E AME ++E S + NS++ C G+ ++A + ++ +K+ P
Sbjct: 537 TELAMEKFDELA--ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNY-- 592
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+ N++ +G C +G + A+ F + E R DT+++N +I CK+ L EA +L
Sbjct: 593 ----TCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDL 647
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
EM +KG+ PD +TY + E ++ + +K
Sbjct: 648 LSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 128/304 (42%), Gaps = 44/304 (14%)
Query: 16 LMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAV 74
L++G VR S + E + + GV + + L+ GY ++G E+A+ V
Sbjct: 172 LLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMV 231
Query: 75 GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGY 134
E V V N++L A+ G+ + +L MK P R+ ++N + GY
Sbjct: 232 SE-FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRV-----TYNNLVYGY 285
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C G K+A ++ M + PD ++N LI+ LC G + E EL M + PD
Sbjct: 286 CKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDV 345
Query: 195 YTYGLLMDACFEV--------------------NRVDDGATY---------------FRK 219
TY L+D CFE+ N+V + ++
Sbjct: 346 VTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKE 405
Query: 220 MVD-SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
+VD G P++ Y+ L+ ++VG L A M +K +KM+ + ++ AL
Sbjct: 406 LVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKER 465
Query: 278 KLDE 281
KLDE
Sbjct: 466 KLDE 469
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 119/301 (39%), Gaps = 58/301 (19%)
Query: 101 DEALKLFDRM--KNEH-NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
D +L L + + N H +PP A+ F++ Y +G+ A+++F+KM + P
Sbjct: 109 DASLSLCNSLLHPNLHLSPPPSKAL----FDIALSAYLHEGKPHVALQIFQKMIRLKLKP 164
Query: 158 DTL--------------------------------------SFNNLIDQLCKNGMLAEAE 179
+ L +FN L++ C G L +A
Sbjct: 165 NLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDAL 224
Query: 180 ELYGEM-SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ M S+ VNPD TY ++ A + R+ D M +GL PN YN LV
Sbjct: 225 GMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYG 284
Query: 239 LVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGI----LDDG 293
++G L EA ++M + + D +Y ++ L + G + E LE++ + L
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPD 344
Query: 294 GIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE--KAEAKAREAEAAEAAKRSARAAI 351
+ ++ + + LS E R KLME+ E + KA K R A+
Sbjct: 345 VVTYNTLIDGCFELGLSLEAR-----KLMEQMENDGVKANQVTHNISLKWLCKEEKREAV 399
Query: 352 A 352
Sbjct: 400 T 400
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 83/202 (41%), Gaps = 35/202 (17%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLF-EELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G + D ++ ++LG+ ++G + F + E +K D L+ G +GM
Sbjct: 551 GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFK---PDNYTCNILLNGLCKEGMT 607
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E+A+ +N + E ++ V N+++ A C + K EA L M+ + P R N
Sbjct: 608 EKALNFFNTLIEER---EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMG------------EYRCSPDT-----------L 160
+M DG + + E+ +K E +P T +
Sbjct: 665 SFISLLMEDG-----KLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAI 719
Query: 161 SFNNLIDQLCKNGMLAEAEELY 182
+++++ID+LC G L E Y
Sbjct: 720 AYSDVIDELCSRGRLKEHSRSY 741
>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
Length = 506
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V+S+ ++ G + S L + + GG + + V Y ++ G G ++A
Sbjct: 159 PNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAY 218
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGS 126
Y E + + + + V +S++ ALC D+A+++ DRM KN P N +
Sbjct: 219 ATYREML--DRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTP------NCFT 270
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+ + G+C G+ +AI+ KM P+ +++++ +D LCKNG EA +++ M
Sbjct: 271 YTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMV 330
Query: 187 DKGVNPDEYTYGLL------------MDACFEV-----------------------NRVD 211
+G+ PD TY L M F++ +VD
Sbjct: 331 KRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVD 390
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ F KM GL+PN YN L+ ++ ++ A + F MV + + +Y M+
Sbjct: 391 EAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIML 450
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+ L G+ E I+ G + E+
Sbjct: 451 QGLFRTGRTGTAKEFYVQIIKSGKKDLIEQ 480
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 9/262 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + + V YS ++ + D + + + + GV + Y SL+ G+
Sbjct: 224 MLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKN--GVTPNCFTYTSLVHGFCSS 281
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA++ + E + N V+ + V +S +D LC NG+ EA K+F M P
Sbjct: 282 GQLTEAIK-FLEKMCSNG-VEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKP--- 336
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + GY +G + +F M + PD FN LI K G + EA
Sbjct: 337 --DITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAML 394
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M +G+ P+ TY L++ ++ R+++ F++MV +G+ PN YN ++ L
Sbjct: 395 VFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLF 454
Query: 241 QVGMLDEAKSFFDIMVKKLKMD 262
+ G AK F+ ++K K D
Sbjct: 455 RTGRTGTAKEFYVQIIKSGKKD 476
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 10/249 (4%)
Query: 40 LGGVVSDG-----VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL 94
LG VV G +++ L+KG ++AM+ + E V + ++ +L L
Sbjct: 113 LGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVP-NVFSHTIILKGL 171
Query: 95 CNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
C+ + EAL+L M ++ N+ S++ + DG G A +R+M + R
Sbjct: 172 CHENRSQEALELLHMMADDGG---GCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRR 228
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
P+ ++++++I LCK + +A E++ M GV P+ +TY L+ ++ +
Sbjct: 229 ILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAI 288
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
+ KM +G+ PN+ Y+ + L + G EA+ F MVK+ LK D +Y ++
Sbjct: 289 KFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGY 348
Query: 274 SDGGKLDEI 282
+ G L E+
Sbjct: 349 AIEGALVEM 357
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG---VNP 192
G G +DA++VF ++ S N + + ++ A A + M+ G V P
Sbjct: 30 GSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNP-AAAVSRFNRMARAGASMVTP 88
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+TYG+L+ C R+D G +V G R ++N L+ L D+A
Sbjct: 89 TVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDA---M 145
Query: 253 DIMVKKLK-----MDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
DI+++ + + S+ ++K L + E LE++ + DDGG
Sbjct: 146 DIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGG 192
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 138/328 (42%), Gaps = 42/328 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYG--------- 51
M G V Y+ L+ F R+G D +L E++ + GG + V Y
Sbjct: 222 MLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARK 281
Query: 52 -------------------------SLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVA 86
L+ GYF +G E+A E EN + + V
Sbjct: 282 GELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEM--ENEGIVPTVVT 339
Query: 87 NNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N+++ + +G + A F M+ L +L ++N + +GYC G K+A+ +
Sbjct: 340 YNTIIHGMFRSGNVEAARMKFVEMRA-----MGLLPDLITYNSLINGYCKAGNLKEALWL 394
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F + +P L++N L+D C+ G L EA EM ++G PD TY +LM+ +
Sbjct: 395 FGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRK 454
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDAS 265
V + +F +M+ GL+P+ YN + + +G EA ++M+ + + D +
Sbjct: 455 VRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVT 514
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDG 293
Y + L G L + + ++ DG
Sbjct: 515 YNIFLDGLCKSGNLKDAYVLWMKMVSDG 542
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 144/322 (44%), Gaps = 16/322 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + Y+ L+ G+ R GD + R +E+ E+ G D Y LM G + +
Sbjct: 402 GLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQ--GCQPDVSTYTILMNG--SRKVRN 457
Query: 65 EAM--ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
AM E ++E + + ++ A N+ + A G EA +L + M + + ++
Sbjct: 458 LAMVREFFDEMLSKG--LQPDCFAYNTRISAELILGSTSEAFQLTEVMIS-----RGISS 510
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ ++N+ DG C G KDA ++ KM PD +++ LI C+ G L EA +++
Sbjct: 511 DTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIF 570
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M G+ P TY + + A + +F+KM++ G+RPN YN L+ L ++
Sbjct: 571 DGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRM 630
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G + A F M+++ L + +Y ++ G +E + + + G
Sbjct: 631 GRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTH 690
Query: 302 QEFVKGELSKEGREEEVVKLME 323
KG EG+ + ++ ME
Sbjct: 691 NALFKG--FDEGQSKHAIQYME 710
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 10/277 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ LM G + + V F+E+ K G+ D Y + + +
Sbjct: 433 MVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSK--GLQPDCFAYNTRISAELIL 490
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + + + V N LD LC +G +A L+ +M ++ P +
Sbjct: 491 GSTSEAFQLTEVMISRG--ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCI 548
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + +C +GR ++A ++F M P +++ I C+ G L A
Sbjct: 549 -----TYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYG 603
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +M ++GV P+E TY +L+ A + R + +F +M++ GL PN Y L+
Sbjct: 604 WFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNC 663
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDG 276
+ G +EA + M + + D ++ + K +G
Sbjct: 664 KEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEG 700
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 6/136 (4%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
+ FR+M + P N ++ L + +Y EM G+ P TY L+D
Sbjct: 180 CLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLD 239
Query: 203 ACFEVNRVDDGATYFRKM--VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK 260
+ F RVD A R+M G P+ YN ++ L + G L++A D +++
Sbjct: 240 SFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVD----RMR 295
Query: 261 MDDASYKFMMKALSDG 276
M + F L G
Sbjct: 296 MSKKASAFTFNPLITG 311
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 154/387 (39%), Gaps = 60/387 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++GF D V Y+ L+ GF G D LF E+ + D +Y +L+KG
Sbjct: 72 MPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ------PDMHMYAALVKGLCKA 125
Query: 61 GMEEEAM------------------------ECYNEAVGE---------NSSVKMSAVAN 87
G EE + C+ E + V
Sbjct: 126 GRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTC 185
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+V++A C G+ +AL++ + MK P N+ ++N + G+C +G+ A+ +
Sbjct: 186 TAVINAYCKEGRMSDALRVLELMKLRGCKP-----NVWTYNALVQGFCNEGKVHKAMALL 240
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
KM +PD +++N LI C +G + A L M G+ D+YTY L++A +
Sbjct: 241 NKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKD 300
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
R D + F + G++PN +N L+ L + G +D A F + MV D +Y
Sbjct: 301 GRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTY 360
Query: 267 KFMMKALSDGGKLDEILEIVGGILD----DGGIEFSEELQEFVK-----------GELSK 311
++ L E L +G +L + ++ + + +K GE+
Sbjct: 361 SSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS 420
Query: 312 EGREEEVVKLMEKKEREKAEAKAREAE 338
G +VV E + EAE
Sbjct: 421 SGCNPDVVTYTTSMRAYCIEGRLNEAE 447
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 12/280 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V++Y L+ GF +G L K ++ GV D V Y L++G + G E A
Sbjct: 215 PNVWTYNALVQGFCNEGKVHKAMALLN--KMRVCGVNPDAVTYNLLIRGQCIDGHIESAF 272
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E + N++++ALC +G+ D+A LFD ++ P N +F
Sbjct: 273 RLLR--LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKP-----NAVTF 325
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + +G C G+ A + KM C+PDT ++++ I+ LCK E GEM
Sbjct: 326 NSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 385
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
K V P Y +++ + A + +MV SG P++ Y + G L+E
Sbjct: 386 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 445
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
A++ M K + +D +Y +M + G+ D + I+
Sbjct: 446 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 485
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 144/362 (39%), Gaps = 53/362 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V G D V Y+ L+ G DG + FRL ++ G+++D Y +L+
Sbjct: 243 MRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD--GLIADQYTYNALINALCKD 300
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
G ++A ++ E +K +AV NS+++ LC +GK D A K ++M + P
Sbjct: 301 GRTDQACSLFDSL--ETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTY 358
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
K + + ++ ++ + + + +M
Sbjct: 359 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 418
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
C+PD +++ + C G L EAE + EMS GV D Y LMD + +
Sbjct: 419 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 478
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM-----------------LDEAKSFFD 253
D + ++M PN Y L+ LV++ + L + FD
Sbjct: 479 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 538
Query: 254 IMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKE 312
+M K + + +Y +++ S+ G+ +E +V ++ + I +E++ + K
Sbjct: 539 VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLV-SLMKEDSISLNEDIYTALVTCFCKS 597
Query: 313 GR 314
R
Sbjct: 598 KR 599
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 119/285 (41%), Gaps = 46/285 (16%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S + A NS++ C + D A LFD+M P + A ++ S+ + +G+C
Sbjct: 40 SGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM-----PLRGFAQDVVSYAALIEGFCET 94
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
GR +A+E+F +M + PD + L+ LCK G E + M + G P Y
Sbjct: 95 GRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAY 150
Query: 198 GLLMD-ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM- 255
++D C+E + + ++M + GL P + ++ + G + +A ++M
Sbjct: 151 AAVVDFRCWE-RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 209
Query: 256 VKKLKMDDASYKFMMKALSDGGKLDEILE-------------------IVGGILDDGGIE 296
++ K + +Y +++ + GK+ + + ++ G DG IE
Sbjct: 210 LRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIE 269
Query: 297 FSEELQEFVKGE---------------LSKEGREEEVVKLMEKKE 326
+ L ++G+ L K+GR ++ L + E
Sbjct: 270 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLE 314
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 124/299 (41%), Gaps = 17/299 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K V Y+ ++ +++ + V R + E+ G D V Y + M+ Y ++
Sbjct: 383 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS--SGCNPDVVTYTTSMRAYCIE 440
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR- 119
G EA E + V + +A N+++D + G+ D A+ + +M + + P +
Sbjct: 441 GRLNEAENVLMEM--SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF 498
Query: 120 ----LAVNLGSFNVMAD-------GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
L +L ++ D G D +F M + P++ +++++++
Sbjct: 499 TYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEG 558
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
++G EA L M + ++ +E Y L+ + R D M+ G P+
Sbjct: 559 FSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPH 618
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
L Y L+ L+ G D+AK F + K D+ +K ++ L G D E++
Sbjct: 619 LMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI 677
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N +I LC+ LA A M G PD YT+ L+ N+VD F KM
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLD 280
G ++ Y L+ + G +DEA F M + D Y ++K L G+ +
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQP---DMHMYAALVKGLCKAGRGE 129
Query: 281 E 281
E
Sbjct: 130 E 130
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + C + A+ M PD +FN+LI C+ + A +L+ +M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+G D +Y L++ E R+D+ F +M +P++ +Y LV L + G
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128
Query: 246 DEAKSFFDIMVKKLK 260
+E +M++++K
Sbjct: 129 EEGL----LMLRRMK 139
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/252 (18%), Positives = 99/252 (39%), Gaps = 26/252 (10%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D + Y+ LM G G +D + +++ V + Y L++ + E
Sbjct: 457 GVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV--ASVPNQFTYFILLRHLVRMRLVE 514
Query: 65 EAMECYNEAVGENSSVKMSAV-----------------ANNSVLDALCNNGKFDEALKLF 107
+ + V + +++++ V +S+L+ +G+ +EA L
Sbjct: 515 DVLPLTPAGVWK--AIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLV 572
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
MK + +++N + + +C R+ DA + M ++ P +S+ +L+
Sbjct: 573 SLMKED-----SISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLS 627
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
L G +A+E++ K +PDE + +++D + D + RP
Sbjct: 628 GLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRP 687
Query: 228 NLAVYNRLVGKL 239
+ Y L +L
Sbjct: 688 SHQTYAMLTEEL 699
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 161/321 (50%), Gaps = 10/321 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V Y + GF G G + +++ G+ D V Y L+ G+ G
Sbjct: 249 QGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTD-EGLKPDLVTYTVLICGHCQMGNI 307
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EEA+ + + +S +++ + + +L +LC G+ DEAL+L M+ + P +
Sbjct: 308 EEALRLRRDLL--SSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQP-----D 360
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L +++++ G C QG+ + AI+++++M R P++ + + ++ LC+ GML++A +
Sbjct: 361 LVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFD 420
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ + PD Y +++D ++ V++ ++++ D + P++ +N L+ +
Sbjct: 421 SLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNR 480
Query: 244 MLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+ EA+ + I + L+ +Y +M A + G ++++ E++ ++ IE +
Sbjct: 481 KVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLE-MNLKDIEPTVVTY 539
Query: 303 EFVKGELSKEGREEEVVKLME 323
V L K+ + EE V+L+E
Sbjct: 540 TVVIKGLCKQRKLEESVQLLE 560
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 132/287 (45%), Gaps = 10/287 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF + ++YS L+ + G D +L E++ + D V Y L+ G +G +
Sbjct: 321 GFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEA--NNLQPDLVTYSILIHGLCKQGKVQ 378
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A++ Y E + + ++ A++ +L LC G +A FD + + P ++
Sbjct: 379 QAIQLYKEMCF--NRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRP-----DV 431
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+N+M DGY G ++A+ +++++ + +P ++FN+LI CKN + EA L
Sbjct: 432 TLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLES 491
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ G+ P TY LM+A E ++ +M + P + Y ++ L +
Sbjct: 492 IKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRK 551
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
L+E+ D+ K L D +Y +++ + + E++ +L
Sbjct: 552 LEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDML 598
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 132/294 (44%), Gaps = 10/294 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K V ++ L+ GF ++ RL E +K L G+ V Y +LM Y +G
Sbjct: 460 KAITPSIVTFNSLIYGFCKNRKVVEARRLLESIK--LHGLEPSAVTYTTLMNAYCEEGNI 517
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ E E ++ + V V+ LC K +E+++L + M+ + P ++
Sbjct: 518 NKLHELLLEM--NLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQI--- 572
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + +C + A E+ M + P ++N LID LC+ G + +A+ +
Sbjct: 573 --TYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLV 630
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ D+ +N + Y ++ A F +MV+ G ++ Y+ ++ +L +
Sbjct: 631 SLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRC 690
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+++EAK +F IM+ + D ++ M+ A G + + E++ ++ G +
Sbjct: 691 LINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLH 744
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 122/252 (48%), Gaps = 8/252 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + D Y+ L+ G + G + L +++++ G+ D V Y + KG+ +
Sbjct: 211 MLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQ--GLQPDMVTYKIVAKGFHLL 268
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G+ A E + + + +K V ++ C G +EAL+L + +
Sbjct: 269 GLMSGAREIIQKMLTD-EGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSS-----GF 322
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+N+ ++V+ C +G+ +A+++ +M PD ++++ LI LCK G + +A +
Sbjct: 323 QLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQ 382
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY EM + P+ + + ++ E + D YF ++ S LRP++ +YN ++ V
Sbjct: 383 LYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYV 442
Query: 241 QVGMLDEAKSFF 252
++G ++EA +
Sbjct: 443 KLGDVEEAVRLY 454
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
YN+ ++S SA ++ ++D LC +F +A+ LF R N K A ++ SFN
Sbjct: 138 YNDI--KDSGTPQSARTSSIIVDGLCGQSRFRDAV-LFLR----QNDGKEFAPSVVSFNT 190
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ YC G A F M +Y PDT S+N LI L G + EA EL +M +G
Sbjct: 191 IMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQG 250
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMV-DSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+ PD TY ++ + + +KM+ D GL+P+L Y L+ Q+G ++EA
Sbjct: 251 LQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEA 310
Query: 249 KSF-FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
D++ +++ Y ++ +L G++DE L+++
Sbjct: 311 LRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLL 349
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 3/201 (1%)
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+++ DG CGQ RF+DA+ R+ +P +SFN ++ + CK G+ A+ + M
Sbjct: 154 SIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLK 213
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G+ PD Y+Y +L+ +++ M GL+P++ Y + +G++
Sbjct: 214 YGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSG 273
Query: 248 AKSFFDIMVKK--LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
A+ M+ LK D +Y ++ G ++E L + +L G + + L +
Sbjct: 274 AREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLL-SSGFQLNVILYSVL 332
Query: 306 KGELSKEGREEEVVKLMEKKE 326
L K G+ +E ++L+ + E
Sbjct: 333 LSSLCKRGQVDEALQLLYEME 353
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
DA+ V KM E P ++N+L+ L ++ ++Y ++ D G T ++
Sbjct: 100 HDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMW---DVYNDIKDSGTPQSARTSSII 156
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-L 259
+D +R D + R+ P++ +N ++ + ++G+ D AKSFF +M+K +
Sbjct: 157 VDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGI 216
Query: 260 KMDDASYKFMMKALSDGGKLDEILEI 285
D SY ++ L G ++E LE+
Sbjct: 217 LPDTYSYNILIHGLIVAGSMEEALEL 242
>gi|302809819|ref|XP_002986602.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
gi|300145785|gb|EFJ12459.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
Length = 445
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 140/297 (47%), Gaps = 9/297 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
GV + V Y ++ G G+ +EA E V E++ ++AV N V++ LC +G+ D
Sbjct: 113 GVAPNRVTYNAMATGLGKAGLLDEAFELM--GVMESAGFALTAVTFNPVVEFLCKSGRPD 170
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EA K+ + M + P N+ + N++ +C R ++A+ + M E P ++
Sbjct: 171 EACKVMETMLLRNIEP-----NILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVT 225
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
FN L++ C + A +L M+ P+ TY +++ E+ R+ + + ++V
Sbjct: 226 FNALLELFCNTDQMDSAAKLLETMAHSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLV 285
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
G PNL V N V L + G +D A F +M ++ + + A+Y +++ G++D
Sbjct: 286 VCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMD 345
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREA 337
E ++ ++ +G + S ++G L G+ E +M + R A+ A
Sbjct: 346 EAERVLEEMIAEGSLPDSTTYSVLIQG-LCSAGQIEHAFMVMLQVTRAVESARPDPA 401
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 8/221 (3%)
Query: 37 KEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCN 96
++ LG V YG+L+ G+ + G +EA E S V +N +L
Sbjct: 4 RKTLGEFVHSEFTYGTLVHGHCLAGEFDEAKRLVEEFKDTGMSPGSLVVLHNLMLKGFSE 63
Query: 97 NGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
G DEA RM + N S+N + D C GR ++A E + M + +
Sbjct: 64 AGFVDEAKSHLHRMDCKPNSV--------SYNTLIDALCSSGRIQEAREELQAMAKRGVA 115
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P+ +++N + L K G+L EA EL G M G T+ +++ + R D+
Sbjct: 116 PNRVTYNAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKV 175
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
M+ + PN+ N ++ + +EA DIMV+
Sbjct: 176 METMLLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVE 216
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 9/179 (5%)
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT--YGLLMDACF 205
+ +GE+ S ++ L+ C G EA+ L E D G++P + L++
Sbjct: 5 KTLGEFVHS--EFTYGTLVHGHCLAGEFDEAKRLVEEFKDTGMSPGSLVVLHNLMLKGFS 62
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDA 264
E VD+ ++ +M +PN YN L+ L G + EA+ M K+ + +
Sbjct: 63 EAGFVDEAKSHLHRM---DCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRV 119
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+Y M L G LDE E++ G+++ G + V L K GR +E K+ME
Sbjct: 120 TYNAMATGLGKAGLLDEAFELM-GVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVME 177
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G A+ Y+ L+ GF + G D R+ EE+ + G + D Y L++G G
Sbjct: 322 EGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAE--GSLPDSTTYSVLIQGLCSAGQI 379
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH 114
E A + S + +++ LC G+ D A + +RM +EH
Sbjct: 380 EHAFMVMLQVTRAVESARPDPATFVKLIEKLCELGEMDRAALVLERMGDEH 430
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 20/288 (6%)
Query: 2 FVKGFVADPVVYSY-LMLGFVRDGD----SDGVFRLFEELKEKLGGVVSDGVVYGSLMKG 56
F K P + +Y L++G + + D + VF L+ K G + D Y L+
Sbjct: 777 FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF-----LQVKNTGCIPDVATYNFLLDA 831
Query: 57 YFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHN 115
Y G +E E Y E + + + +N V+ L G D+AL L+ D M +
Sbjct: 832 YGKSGKIDELFEIYKEMSAHEC--EPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 889
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P ++ + DG GR +A ++F M +Y C P+ +N LI+ K G
Sbjct: 890 SPTAC-----TYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEA 944
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
A L+ M +GV PD TY +L+D V RVD+G YFR++ +SGL P++ YN +
Sbjct: 945 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLI 1004
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMMKALSDGGKLDE 281
+ L + L+EA F+ M K + D +Y ++ L G ++E
Sbjct: 1005 INGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEE 1052
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 139/317 (43%), Gaps = 11/317 (3%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P Y+Y++ + + GDS FE++K K G+ + V + + G + EA
Sbjct: 433 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTK--GIAPNIVACNASLYSLAKAGRDREAK 490
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + ++ + +V N ++ G+ DEA+KL M P + VN
Sbjct: 491 QIFYGL--KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVN-SLI 547
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + R +A ++F +M E + P +++N L+ L KNG + EA EL+ M
Sbjct: 548 NTLYKA----DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 603
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
KG P+ T+ L D + + V KM+D G P++ YN ++ LV+ G + E
Sbjct: 604 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 663
Query: 248 AKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
A FF M K + D + ++ + G +++ +I+ L + + E + G
Sbjct: 664 AMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMG 723
Query: 308 ELSKEGREEEVVKLMEK 324
+ E + V E+
Sbjct: 724 SILAEAGIDNAVSFSER 740
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Query: 49 VYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFD 108
Y SLM G + E M E E +K + + L GK +EA ++
Sbjct: 227 TYSSLMVGLGKRRDIESVMGLLKEM--ETLGLKPNVYTFTICIRVLGRAGKINEAYEILK 284
Query: 109 RMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
RM +E P ++ ++ V+ D C + A EVF KM R PD +++ L+D+
Sbjct: 285 RMDDEGCGP-----DVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDR 339
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
N L + + EM G PD T+ +L+DA + + M D G+ PN
Sbjct: 340 FSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPN 399
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM 270
L YN L+ L++V LD+A FD M + L + +Y +++
Sbjct: 400 LHTYNTLICGLLRVHRLDDALEIFDNM-ESLGVKPTAYTYIV 440
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 136/328 (41%), Gaps = 45/328 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + GF YS LM+G + D + V L +E+ E L G+ + + ++
Sbjct: 216 MILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEM-ETL-GLKPNVYTFTICIRVLGRA 273
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA E ++ V ++DALC K D A ++F +MK + P R+
Sbjct: 274 GKINEAYEILKRM--DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRV 331
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + D + + + +M + PD ++F L+D LCK G EA
Sbjct: 332 -----TYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFA 386
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA----------------TY-------- 216
M D+G+ P+ +TY L+ V+R+DD TY
Sbjct: 387 KLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYG 446
Query: 217 -----------FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS-FFDIMVKKLKMDDA 264
F KM G+ PN+ N + L + G EAK F+ + L D
Sbjct: 447 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 506
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDD 292
+Y MMK S G++DE ++++ ++++
Sbjct: 507 TYNMMMKCYSKVGEIDEAIKLLSEMVEN 534
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 41/246 (16%)
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V ++DALC G F EA D M+++ P NL ++N + G R DA
Sbjct: 365 VVTFTILVDALCKAGNFGEAFAKLDVMRDQGILP-----NLHTYNTLICGLLRVHRLDDA 419
Query: 144 IEVFRKMGEYRCSPDTLSFNNLID-----------------------------------Q 168
+E+F M P ++ ID
Sbjct: 420 LEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 479
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
L K G EA++++ + D G+ PD TY ++M +V +D+ +MV++ P+
Sbjct: 480 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPD 539
Query: 229 LAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
+ V N L+ L + +DEA K F + KLK +Y ++ L GK+ E +E+
Sbjct: 540 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 599
Query: 288 GILDDG 293
G++ G
Sbjct: 600 GMVQKG 605
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 127/285 (44%), Gaps = 38/285 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEEL--KEKLGGVVSDGVVYGSLMKGYFMKGM 62
G + D Y++L+ + + G D +F +++E+ E ++ +V L+K G
Sbjct: 817 GCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKA----GN 872
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP----- 117
++A++ Y + + + +A ++D L +G+ EA +LF+ M + P
Sbjct: 873 VDDALDLYYDLMSDRD-FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIY 931
Query: 118 --------------------KRLA-----VNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
KR+ +L +++V+ D C GR + + FR++ E
Sbjct: 932 NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKE 991
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS-DKGVNPDEYTYGLLMDACFEVNRVD 211
+PD + +N +I+ L K L EA L+ EM +G+ PD YTY L+ V+
Sbjct: 992 SGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVE 1051
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
+ + ++ +GL PN+ +N L+ G + A + + MV
Sbjct: 1052 EAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1096
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 10/233 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+ F Y L+ G + G +LFE + + G + +Y L+ G+ G
Sbjct: 887 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDY--GCRPNCAIYNILINGFGKAGEA 944
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A + V E V+ + ++D LC G+ DE L F +K P +
Sbjct: 945 DAACALFKRMVKE--GVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNP-----D 997
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYR-CSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+ +N++ +G R ++A+ +F +M + R +PD ++N+LI L GM+ EA ++Y
Sbjct: 998 VVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1057
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
E+ G+ P+ +T+ L+ + + ++ MV G PN Y +L
Sbjct: 1058 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 18/218 (8%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
Y ++V NS++ + N +L+AL +GK +E +FD M+ + + + ++
Sbjct: 106 YFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQK-----RIIKRDTNTYLT 160
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ +G + A RKM E+ + S+N LI L K+ EA E+Y M G
Sbjct: 161 IFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDG 220
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
P TY LM + ++ ++M GL+PN+ + + L + G ++EA
Sbjct: 221 FRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 280
Query: 250 SFFDIMVKKLKMDD-------ASYKFMMKALSDGGKLD 280
+MDD +Y ++ AL KLD
Sbjct: 281 EILK------RMDDEGCGPDVVTYTVLIDALCTARKLD 312
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 6/229 (2%)
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
++A + N ++ L + EA++++ RM + P +L +++ + G + +
Sbjct: 188 LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRP-----SLQTYSSLMVGLGKRRDIE 242
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
+ + ++M P+ +F I L + G + EA E+ M D+G PD TY +L+
Sbjct: 243 SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 302
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
DA ++D F KM +P+ Y L+ + LD F+ M K +
Sbjct: 303 DALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHV 362
Query: 262 DD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
D ++ ++ AL G E + + D G + + G L
Sbjct: 363 PDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLL 411
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 124/244 (50%), Gaps = 6/244 (2%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
+S VK S + N++++ LC GK EA+ +F+++ P ++ + G+C
Sbjct: 190 SSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAF-----TYTSLILGHCR 244
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
+ A EVF +M + C+P++++++ LI+ LC G + EA ++ EM++KG+ P YT
Sbjct: 245 NRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYT 304
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
Y + + + ++ RVDD R M G P++ Y ++ L + G ++ A + M+
Sbjct: 305 YTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKML 364
Query: 257 KK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
K+ L + +Y ++ L G+ L+I + G + ++ + +KG + E
Sbjct: 365 KEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIE 424
Query: 316 EEVV 319
+ +V
Sbjct: 425 KAMV 428
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 139/330 (42%), Gaps = 13/330 (3%)
Query: 9 DPVVYSYL--MLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+P VY+Y + G D L + +K G Y +++ G F G E A
Sbjct: 299 EPTVYTYTVPISSLCDIGRVDDAINLVRSMGKK--GCSPSVQTYTAIISGLFRAGKMELA 356
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ Y++ + E + + V N++++ LC G+F ALK+FD M+ N +
Sbjct: 357 IGMYHKMLKE--GLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT-----LANAQT 409
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + G G + A+ VF KM + SP +++N LI + K G L A M
Sbjct: 410 YNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMK 469
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ PDE TY L+ + ++D ++F +M+ G+ PN Y ++ + G +D
Sbjct: 470 ESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKID 529
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
A S F+ M + +Y ++ LS G + E + + + G + +
Sbjct: 530 VALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLI 589
Query: 306 KGELSKEGREEEVVKLMEKKEREKAEAKAR 335
G L K K+ + E++ A
Sbjct: 590 NG-LCKNTATNLAFKIFHEMEKKNCLPNAH 618
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 154/386 (39%), Gaps = 59/386 (15%)
Query: 43 VVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE 102
+ D Y SL+ G+ ++A E ++ V + + ++V +++++ LCN G+ E
Sbjct: 228 LCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNP--NSVTYSTLINGLCNEGRIGE 285
Query: 103 ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS------ 156
A+ + + M + P + ++ V C GR DAI + R MG+ CS
Sbjct: 286 AMDMLEEMTEKGIEP-----TVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340
Query: 157 -----------------------------PDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
P+T+++N LI++LC G A +++ M
Sbjct: 341 TAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEG 400
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G + TY ++ F ++ ++ F KM+ G P + YN L+ + ++ G L+
Sbjct: 401 HGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNN 460
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A F +M + + D+ +Y ++ GGKLD +L G +
Sbjct: 461 ATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMID 520
Query: 307 GELSKEGREEEVVKLMEKKEREKAEAKAREAEA-----------AEAAKRSARAAIASLI 355
G KEG+ + + L E+ E A A +EA K A+ L
Sbjct: 521 G-YCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQ 579
Query: 356 PSKFGDKVGGTEMADNANANEAASVA 381
P + + T + + N A ++A
Sbjct: 580 P----NTITYTSLINGLCKNTATNLA 601
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 13/258 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + Y+ ++ G+ ++G D LFE ++E G + Y +++ G K
Sbjct: 503 MLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEE--NGCSASIETYNAIISG-LSK 559
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E + + E ++ + + S+++ LC N + A K+F M+ ++ P
Sbjct: 560 GNRFSEAEKFCAKMTEQG-LQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLP--- 615
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++ + G C +G+ DA E ++ E C P +++ L+ LC+ G EA +
Sbjct: 616 --NAHTYTSLIYGLCQEGKV-DAAE---RLTENGCEPTIDTYSTLVSGLCREGRSNEASQ 669
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L M +KG++P Y L+ A + +VD F M G +P+L +Y L+ L
Sbjct: 670 LVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALC 729
Query: 241 QVGMLDEAKSFFDIMVKK 258
V +EA + F ++KK
Sbjct: 730 GVSRAEEALNIFQSLLKK 747
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 117/283 (41%), Gaps = 44/283 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V + V Y+ L+ +G ++F+ ++ G +++ Y ++KG F
Sbjct: 363 MLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGH--GTLANAQTYNQIIKGLF-- 418
Query: 61 GME--EEAMECYNEAVGENSSVKMSAV------------ANNS----------------- 89
GM+ E+AM +N+ + + S + NN+
Sbjct: 419 GMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDER 478
Query: 90 ----VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
++ C GK D A F M P N ++ M DGYC +G+ A+
Sbjct: 479 TYCELISGFCKGGKLDSATSFFYEMLKCGISP-----NQWTYTAMIDGYCKEGKIDVALS 533
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+F +M E CS ++N +I L K +EAE+ +M+++G+ P+ TY L++
Sbjct: 534 LFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLC 593
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+ + F +M PN Y L+ L Q G +D A
Sbjct: 594 KNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA 636
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P L+FN +I+ LCK G + EA ++ ++ + PD +TY L+ ++D
Sbjct: 195 PSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEV 254
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSD 275
F +MV G PN Y+ L+ L G + EA + M +K ++ +Y + +L D
Sbjct: 255 FDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCD 314
Query: 276 GGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
G++D+ + +V + G + + G L + G+ E + + K +E
Sbjct: 315 IGRVDDAINLVRSMGKKGCSPSVQTYTAIISG-LFRAGKMELAIGMYHKMLKE 366
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
SFN L+ QL K M+ A+ +Y ++ GV P T+ +++ + +V + F K+
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
L P+ Y L+ + LD+A FD MVK + +Y ++ L + G++
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283
Query: 280 DEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKAREAEA 339
E ++++ + + GIE + L GR ++ + L+ ++ + A
Sbjct: 284 GEAMDMLEE-MTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTA 342
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 25/187 (13%)
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE-----------------------YTY 197
F +++++L K+ +LA A+ + M N DE Y++
Sbjct: 106 CFVSMLNRLVKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSF 165
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMV 256
L+ + + V + ++ SG++P+L +N ++ L + G + EA F+ I
Sbjct: 166 NTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQ 225
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
L D +Y ++ KLD+ E+ ++ DG S + G L EGR
Sbjct: 226 FDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLING-LCNEGRIG 284
Query: 317 EVVKLME 323
E + ++E
Sbjct: 285 EAMDMLE 291
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D + + LM G G+ +++ + G + V YG+L+ G G
Sbjct: 130 GYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQ--GFQMNQVSYGTLLNGLCKIGETR 187
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ E+ S + V ++++D LC + ++A F M P N+
Sbjct: 188 CAVKLLRMI--EDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFP-----NV 240
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + G+C G+ A + +M +P+ ++N LID LCK G + EA++L E
Sbjct: 241 ITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAE 300
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG D TY ++D + +D F KM G++PN Y L+ L + G
Sbjct: 301 MHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGR 360
Query: 245 LDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L A+ F ++VK +D +Y M+ L G D+ L + + D+G I +
Sbjct: 361 LKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDI 420
Query: 304 FVKGELSKEGREEEVVKLMEKKEREKAE 331
++ L EK E +KAE
Sbjct: 421 IIRS-------------LFEKDENDKAE 435
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 117/251 (46%), Gaps = 9/251 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V+YS ++ G +D + + F E+ + G+ + + Y +L+ G+ + G A
Sbjct: 203 PDVVMYSTIIDGLCKDKIVNQAYDFFSEMNAR--GIFPNVITYSTLIWGFCLAGQLMGAF 260
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
NE + +N + + N ++DALC GK EA KL M ++ P ++ ++
Sbjct: 261 SLLNEMILKN--INPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQP-----ADVVTY 313
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + DG C A +F KM ++ P+ ++ LID LCK G L A++L+ +
Sbjct: 314 NSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLV 373
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
KG D TY +++ + D KM D+G PN ++ ++ L + D+
Sbjct: 374 KGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDK 433
Query: 248 AKSFFDIMVKK 258
A+ M+ K
Sbjct: 434 AEKLLHGMIAK 444
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + YS L+ GF G G F L E+ L + + Y L+ +
Sbjct: 231 MNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMI--LKNINPNVYTYNILIDALCKE 288
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA + E + V NSVLD LC + D+A LF +MK P +
Sbjct: 289 GKVKEAKKLLAEM--HHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKY 346
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C GR K+A ++F+ + C D ++N +I LCK GM +A
Sbjct: 347 -----TYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALA 401
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+ +M D G P+ T+ +++ + FE + D M+ GL
Sbjct: 402 MKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGL 446
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 66/133 (49%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
NL + N++ + +C G+ + V K+ + PDT++ N L+ LC G + + +
Sbjct: 99 NLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFH 158
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
++ +G ++ +YG L++ ++ R + D RP++ +Y+ ++ L +
Sbjct: 159 DKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKD 218
Query: 243 GMLDEAKSFFDIM 255
++++A FF M
Sbjct: 219 KIVNQAYDFFSEM 231
>gi|115449175|ref|NP_001048367.1| Os02g0793200 [Oryza sativa Japonica Group]
gi|113537898|dbj|BAF10281.1| Os02g0793200 [Oryza sativa Japonica Group]
gi|215704904|dbj|BAG94932.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 473
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 144/313 (46%), Gaps = 11/313 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ R + + ++E GV D V Y SL+ G +G+
Sbjct: 53 GLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRMRE--AGVEPDAVTYNSLIAGAARRGLPI 110
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ ++E + S + + + N ++ L +G ++A ++F M + P
Sbjct: 111 HALDLFDEML--RSGIAPDSWSYNPLMHCLFRSGHPEDAYRVFADMAEKGIAPCD----- 163
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG G +A +FR + +++N +I+ LC +G + A + E
Sbjct: 164 TTYNTLLDGMFRAGYAMNAYRMFRYLQRAGLPVSIVTYNTMINGLCSSGKVGYARMVLRE 223
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ P+ TY +M CF+ R + G F ++D G ++ Y ++ LV+ G
Sbjct: 224 LGRTDHAPNIITYTAVMKCCFKYGRFEQGLDTFLSLLDRGYISDVYPYCTVISALVKKGR 283
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L EA ++ D+M++ ++D Y ++ GKLD+ E+V +++DGG+E E
Sbjct: 284 LGEANNYCDLMLQNGSRLDSVCYNTLIHMRCQEGKLDDAFELV-SMMEDGGLESDEYTFA 342
Query: 304 FVKGELSKEGREE 316
+ L K G E
Sbjct: 343 ILVNGLCKMGHIE 355
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 128/308 (41%), Gaps = 37/308 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ LM R G + +R+F ++ EK G+ Y +L+ G F
Sbjct: 119 MLRSGIAPDSWSYNPLMHCLFRSGHPEDAYRVFADMAEK--GIAPCDTTYNTLLDGMFRA 176
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPP-- 117
G A + + + + +S V N++++ LC++GK A + + + +H P
Sbjct: 177 GYAMNAYRMFRYL--QRAGLPVSIVTYNTMINGLCSSGKVGYARMVLRELGRTDHAPNII 234
Query: 118 ------------KRLAVNLGSFNVMAD--------GYCG-------QGRFKDAIEVFRKM 150
R L +F + D YC +GR +A M
Sbjct: 235 TYTAVMKCCFKYGRFEQGLDTFLSLLDRGYISDVYPYCTVISALVKKGRLGEANNYCDLM 294
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+ D++ +N LI C+ G L +A EL M D G+ DEYT+ +L++ ++ +
Sbjct: 295 LQNGSRLDSVCYNTLIHMRCQEGKLDDAFELVSMMEDGGLESDEYTFAILVNGLCKMGHI 354
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM 270
+ M G++ N+ YN LV L + +D A M KLK DD +Y ++
Sbjct: 355 EAAEKQLFYMEIKGMQSNVVAYNCLVDALCKFQEVDAAIRLLQCM--KLK-DDFTYTSLV 411
Query: 271 KALSDGGK 278
L G+
Sbjct: 412 HGLCRVGR 419
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
G R T N + LC+ G LA AE + + G+ PD TY L+ A +
Sbjct: 15 GRGRWLLPTRLLNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGL 74
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+ G +M ++G+ P+ YN L+ + G+ A FD M++ + D SY +
Sbjct: 75 EAGLVVMGRMREAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPL 134
Query: 270 MKALSDGGKLDEILEIVGGILDDG 293
M L G ++ + + + G
Sbjct: 135 MHCLFRSGHPEDAYRVFADMAEKG 158
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 7/162 (4%)
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P RL NV C G A V PD +++N L+ C+ L
Sbjct: 22 PTRL------LNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLE 75
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ G M + GV PD TY L+ F +M+ SG+ P+ YN L+
Sbjct: 76 AGLVVMGRMREAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPLM 135
Query: 237 GKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGG 277
L + G ++A + F D+ K + D +Y ++ + G
Sbjct: 136 HCLFRSGHPEDAYRVFADMAEKGIAPCDTTYNTLLDGMFRAG 177
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 145/309 (46%), Gaps = 35/309 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y ++ G + GD+D L +++ + ++ V+Y +++
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA--AKIEANVVIYSTVIDSLCKY 266
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNP--- 116
E++A+ + E EN V+ + + +S++ LCN G++ +A +L D ++ + NP
Sbjct: 267 RHEDDALNLFTEM--ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 117 --------------------------PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ + N+ +++ + +G+C R +A ++ M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
C P+ +++N LI+ CK + + EL+ EMS +G+ + TY L+ F+
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFM 269
D+ F++MV G+ PN+ YN L+ L + G L +A F+ + + ++ D +Y M
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 270 MKALSDGGK 278
++ + GK
Sbjct: 505 IEGMCKAGK 513
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 131/282 (46%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ D V + L+ GF L +++ E G D V + +L+ G F+
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM--GYKPDTVTFTTLIHGLFLHNKAS 200
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ + V + V +V++ LC G D AL L ++M+ ++ N+
Sbjct: 201 EAVALIDRMVQRGCQPDL--VTYGAVVNGLCKRGDTDLALNLLNKME-----AAKIEANV 253
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + D C DA+ +F +M P+ +++++LI LC G ++A L +
Sbjct: 254 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSD 313
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++ +NP+ T+ L+DA + ++ + +M+ + PN+ Y+ L+ +
Sbjct: 314 MIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDR 373
Query: 245 LDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI 285
L EAK ++M++K + + +Y ++ ++D+ +E+
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 9/207 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V +S L+ FV+ G +L+EE+ ++ + + Y SL+ G+ M EA +
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKR--SIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ ++ + V N++++ C + D+ ++LF M + L N ++ +
Sbjct: 382 ELMIRKDCLP--NVVTYNTLINGFCKAKRVDKGMELFREMSQ-----RGLVGNTVTYTTL 434
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G+ +A VF++M P+ L++N L+D LCKNG LA+A ++ + +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYF 217
PD YTY ++++ + + G YF
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 5/173 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S + + +L A+ KFD + ++M+ ++ NL ++N++ + +C R
Sbjct: 77 SIIEFSKLLSAIAKMNKFDLVISFGEKME-----ILGISHNLYTYNILINCFCRCSRLSL 131
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ + KM + PD ++ N+L++ C +++A L +M + G PD T+ L+
Sbjct: 132 ALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH 191
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
F N+ + +MV G +P+L Y +V L + G D A + + M
Sbjct: 192 GLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + + V Y+ L+ GF + D LF E+ ++ G+V + V Y +L+ G+F
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR--GLVGNTVTYTTLIHGFFQA 441
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ A + + V + V + + N +LD LC NGK +A+ +F+ ++ P
Sbjct: 442 RDCDNAQMVFKQMV--SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP--- 496
Query: 121 AVNLGSFNVMADGYCGQGRFK 141
++ ++N+M +G C G++K
Sbjct: 497 --DIYTYNIMIEGMCKAGKWK 515
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 164/332 (49%), Gaps = 17/332 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V + V Y+ ++LG R G+ D +F ++ + + + V Y L+ G F K
Sbjct: 455 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLAR--DLKPNVVTYSILIDGNFKK 512
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN---EHNPP 117
G E+A++ +++ + N + + N++++ LC G+ EA D++KN E P
Sbjct: 513 GDSEKALDLFDQMLSLN--IAPTDFTFNTIINGLCKVGQMSEAR---DKLKNFLEEGFIP 567
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+ ++N + DG+ +G A+ V+R+M E+ SP+ +++ +LI+ CK+ +
Sbjct: 568 SCM-----TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDL 622
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A + EM +KG+ D Y L+D + ++ F ++++ GL PN VYN ++
Sbjct: 623 ALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMIS 682
Query: 238 KLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+ ++ A ++ M+ ++ D +Y ++ L G+L ++ +L G +
Sbjct: 683 GFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 742
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
V G L +G+ E K++E+ +R+
Sbjct: 743 DIITFHVLVNG-LCNKGQLENARKILEEMDRK 773
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 135/307 (43%), Gaps = 48/307 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V YS L+ G G+ + L+ ++K L G+ SL++GY + E
Sbjct: 355 GLFPNKVTYSVLIEGCCNSGNIEKASELYTQMK--LNGIPPSVFNVNSLLRGYLKAPLWE 412
Query: 65 EAMECYNEAVGENSSVKMSAVAN----NSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
EA + ++EAV VAN N ++ LC GK DEA L D M N+ P
Sbjct: 413 EASKLFDEAVD-------CGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVV 465
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ L N+ +++++ DG +G + A+++F +M
Sbjct: 466 SYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 525
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+P +FN +I+ LCK G ++EA + ++G P TY ++D + +
Sbjct: 526 LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI 585
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
D +R+M + G+ PN+ Y L+ + +D A D M +K L++D +Y
Sbjct: 586 DSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY--- 642
Query: 270 MKALSDG 276
AL DG
Sbjct: 643 -SALIDG 648
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 128/268 (47%), Gaps = 10/268 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF+ + Y+ ++ GF+++G+ D ++ E+ E GV + V Y SL+ G+
Sbjct: 563 EGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCE--FGVSPNVVTYTSLINGFCKSNRI 620
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A++ +E +++ A ++++D C + A LF + P R+
Sbjct: 621 DLALKTRDEM--REKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV-- 676
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+N M G+ + A+ ++KM R D ++ LID L K G L A +LY
Sbjct: 677 ---YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYM 733
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KG+ PD T+ +L++ ++++ +M + P++ +YN L+ + G
Sbjct: 734 EMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREG 793
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMM 270
L EA + D M+ + L DD +Y ++
Sbjct: 794 NLKEAFTLHDEMLDRGLVPDDVTYDILI 821
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 121/275 (44%), Gaps = 7/275 (2%)
Query: 37 KEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCN 96
K L G+ D +++ +G EEA E + E + VK+ A A + ++ A+C
Sbjct: 210 KMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRET--KERGVKLDAGAYSIIIQAVCK 267
Query: 97 NGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
+ L+L + MK P +F + QG +A+ + +M
Sbjct: 268 KPNSNLGLELLEEMKERGWVPSE-----ATFTSVIVACVAQGNMVEALRLKEEMINCGKP 322
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
+ + +L+ C G L A L+ ++++ G+ P++ TY +L++ C ++ +
Sbjct: 323 MNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASEL 382
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG 276
+ +M +G+ P++ N L+ ++ + +EA FD V + +Y MM L G
Sbjct: 383 YTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKG 442
Query: 277 GKLDEILEIVGGILDDGGIEFSEELQEFVKGELSK 311
GK+DE ++ +++ G + + + G K
Sbjct: 443 GKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRK 477
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
FN + + Y R ++AI+ F M P N L+ L + M+ E +LY +M
Sbjct: 153 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 212
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+G+ D +T +++ AC + RV++ YFR+ + G++ + Y+ ++
Sbjct: 213 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIII 262
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 6/207 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +L+A + + A+ F+ M + P +N+ ++ G+ R +++
Sbjct: 154 NYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR-----DLY 208
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
KM D + + ++ K G + EAEE + E ++GV D Y +++ A +
Sbjct: 209 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 268
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLK-MDDASY 266
+ G +M + G P+ A + ++ V G + EA + M+ K M+
Sbjct: 269 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 328
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDG 293
+MK G LD L + I +DG
Sbjct: 329 TSLMKGYCAQGNLDSALNLFNKITEDG 355
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 147/328 (44%), Gaps = 57/328 (17%)
Query: 6 FVADPVVYSYLMLGFVRDGD---SDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+ D V +S L+ F ++G+ + GV + E+ GV + + Y SLM GY
Sbjct: 297 IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEM-----GVEPNVITYNSLMHGY----- 346
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
S++M V EA KLFD M P
Sbjct: 347 ----------------SLQMEVV----------------EARKLFDVMITRGCKP----- 369
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ S++++ +GYC R +A ++F +M +P+T+S+ LI C+ G L EA EL+
Sbjct: 370 DVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELF 429
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M G PD TY +L++ + + FR M + L+PNL +Y L+ + +
Sbjct: 430 KDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKS 489
Query: 243 GMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI--EFSE 299
G L+ A+ F ++ V L+ D Y ++ L G LDE LE + +DG EFS
Sbjct: 490 GNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSY 549
Query: 300 ELQEFVKGELSK--EGREEEVVKLMEKK 325
+ ++G L E R +++ M K
Sbjct: 550 NV--IIRGFLQHKDESRAVQLIGEMRDK 575
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 134/282 (47%), Gaps = 14/282 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ ++ G + G++ L +++ E G D V Y +L+
Sbjct: 187 MVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEV--GCQPDVVTYSTLIDSLCKD 244
Query: 61 GMEEEAMEC--YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ EA++ Y +A G + +V V+ S++ LC+ ++ EA + + M + + P
Sbjct: 245 RLVNEALDIFSYMKAKGISPTV----VSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMP- 299
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ +F+++ D +C +G +A V + M E P+ +++N+L+ + EA
Sbjct: 300 ----DIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEA 355
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+L+ M +G PD ++Y +L++ V R+D+ F +M+ GL PN Y L+
Sbjct: 356 RKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHA 415
Query: 239 LVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKL 279
Q+G L EA+ F D+ D +Y +++ G L
Sbjct: 416 FCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYL 457
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 47/274 (17%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+ + ++++ LC G+F +AL+LFD M P ++ ++ + +G C G
Sbjct: 160 TIITFTTLINGLCKAGEFAQALELFDDMVARGCQP-----DVYTYTTIINGLCKMGETAA 214
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN----------- 191
A + +KMGE C PD ++++ LID LCK+ ++ EA +++ M KG++
Sbjct: 215 AAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQ 274
Query: 192 ------------------------PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
PD T+ LL+D + V + + M + G+ P
Sbjct: 275 GLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEP 334
Query: 228 NLAVYNRLV-GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
N+ YN L+ G +Q+ ++ EA+ FD+M+ + K D SY ++ ++DE ++
Sbjct: 335 NVITYNSLMHGYSLQMEVV-EARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQL 393
Query: 286 VGGILDDG----GIEFSEELQEFVKGELSKEGRE 315
++ G + ++ + F + +E RE
Sbjct: 394 FNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARE 427
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 9/196 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + V Y+ L+ F + G LF+++ G + D Y L++G+ +
Sbjct: 397 MIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHT--NGYLPDLCTYSVLLEGFCKQ 454
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + G + +K + V ++D++C +G + A KLF + P
Sbjct: 455 GYLGKAFRLFRAMQG--TYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQP--- 509
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + + +G C +G +A+E FRKM E C P+ S+N +I ++ + A +
Sbjct: 510 --DVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQ 567
Query: 181 LYGEMSDKGVNPDEYT 196
L GEM DKG DE T
Sbjct: 568 LIGEMRDKGFVADEGT 583
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L+ N + N++ + +C V K+ + P ++F LI+ LCK G A+A
Sbjct: 122 LSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQAL 181
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ +M +G PD YTY +++ ++ A +KM + G +P++ Y+ L+ L
Sbjct: 182 ELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSL 241
Query: 240 VQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDE 281
+ +++EA F M K + SY +++ L + E
Sbjct: 242 CKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKE 284
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE-ELYGEMSDKGVNPDEYTYGLL 200
DA+ F M + P + FN L+ + + +A L +M G++P+ T +L
Sbjct: 73 DALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNIL 132
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-L 259
++ + VD G + K++ GL+P + + L+ L + G +A FD MV +
Sbjct: 133 INCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGC 192
Query: 260 KMDDASYKFMMKALSDGGK 278
+ D +Y ++ L G+
Sbjct: 193 QPDVYTYTTIINGLCKMGE 211
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 147/319 (46%), Gaps = 19/319 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG AD V Y L+LG R + + + +E+ E LG V S+ V G L++G G
Sbjct: 289 KGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIE-LGYVPSEAAVSG-LIEGLIKMGSI 346
Query: 64 EEAMECYNEAVGENSSVKMSAVAN----NSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
E A E N+ VG K+ V N NS++++LC GK +EA LF M P
Sbjct: 347 EGAFELLNK-VG-----KLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNP-- 398
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N ++ ++ DG+ + + A F KM E S S+N++I+ CK G + AE
Sbjct: 399 ---NDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAE 455
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L+ EM DKG+ P TY L+ + V + +M G+ PN + L+ L
Sbjct: 456 LLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGL 515
Query: 240 VQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
Q+ + EA FD MV+ K+ ++ +Y +++ G E++ ++ G +
Sbjct: 516 CQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDT 575
Query: 299 EELQEFVKGELSKEGREEE 317
+ + G L GR E
Sbjct: 576 YTYRPLIAG-LCSTGRVSE 593
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 12/247 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V+Y+ L+ GF++ G+ F + + + G V + V Y +L+ G F G
Sbjct: 673 KGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGE--GYVPNSVTYTALVNGLFKAGYV 730
Query: 64 EEAMECYNEA-VGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
EA + VGE + + LD L G + AL+L + M
Sbjct: 731 NEAKLLFKRMLVGEAIP---NHITYGCFLDHLTKEGNMENALQLHNAMLQGS------FA 781
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N ++N++ GYC G+F++A ++ M PD ++++ I + CK G + A +++
Sbjct: 782 NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMW 841
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M +G+ PD + L+ AC +D M+ GL+P + Y+ L+ +L Q
Sbjct: 842 ECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQR 901
Query: 243 GMLDEAK 249
L + +
Sbjct: 902 ARLTQVQ 908
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 21/299 (7%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
LF+E+ +K G+ Y SL+ GY G+ +A + Y+E G+ + + V +++
Sbjct: 457 LFKEMVDK--GLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGK--GIAPNTVTFTALI 512
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
LC K EA KLFD M P + ++NV+ +G+C +G A E+ +M
Sbjct: 513 CGLCQINKMAEASKLFDEMVELKILPNEV-----TYNVLIEGHCREGNTTRAFELLDEMI 567
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ SPDT ++ LI LC G ++EA+E ++ K DE Y L+ + R+
Sbjct: 568 KKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIK 627
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMV----KKLKMDDASY 266
+ ++MV GL+ +L Y L+ G L++ + F+++ K ++ D+ Y
Sbjct: 628 EALVARQEMVGRGLQMDLVSYAVLIS-----GALNQNDRILFELLREMHGKGMQPDNVIY 682
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKK 325
++ G L + E ++ +G + S V G L K G E KL+ K+
Sbjct: 683 TILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNG-LFKAGYVNE-AKLLFKR 739
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 137/304 (45%), Gaps = 14/304 (4%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+ + V Y+ L+ G R+G++ F L +E+ +K G+ D Y L+ G G EA
Sbjct: 537 LPNEVTYNVLIEGHCREGNTTRAFELLDEMIKK--GLSPDTYTYRPLIAGLCSTGRVSEA 594
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
E N+ + ++ + ++L C G+ EAL M + L ++L S
Sbjct: 595 KEFINDL--HHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVG-----RGLQMDLVS 647
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+ V+ G Q + E+ R+M PD + + LID K+G L +A E + M
Sbjct: 648 YAVLISGALNQND-RILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMI 706
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+G P+ TY L++ F+ V++ F++M+ PN Y + L + G ++
Sbjct: 707 GEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNME 766
Query: 247 EAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE---ILEIVGGI-LDDGGIEFSEELQ 302
A + M++ + +Y +++ GK E +L+++ GI + I +S +
Sbjct: 767 NALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIY 826
Query: 303 EFVK 306
E+ K
Sbjct: 827 EYCK 830
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 8/231 (3%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
V Y + G EA+E ++GE +K V +++ LC +F+ +++
Sbjct: 261 VTYNVFINGLCKSKRVWEAVEV-KRSLGE-KGLKADLVTYCTLVLGLCRIQEFEVGMEMM 318
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
D M P AV+ + +G G + A E+ K+G+ P+ +N++I+
Sbjct: 319 DEMIELGYVPSEAAVS-----GLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMIN 373
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
LCK G L EAE L+ M+++G+NP++ TY +L+D ++D YF KM++ G+
Sbjct: 374 SLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISA 433
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
+ YN ++ + G + A+ F MV K LK A+Y ++ G
Sbjct: 434 TVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDG 484
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 41/229 (17%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++L+AL KF + L+LFD + N P + + V+ C F A E+
Sbjct: 194 SALLNALARIRKFRQVLELFDTLVNAGVKP-----DCYIYTVVVKCLCELKDFNKAKEII 248
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL------- 200
+ CS +++N I+ LCK+ + EA E+ + +KG+ D TY L
Sbjct: 249 NQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRI 308
Query: 201 ---------MDACFEVNRVDDGAT-------------------YFRKMVDSGLRPNLAVY 232
MD E+ V A K+ G+ PNL VY
Sbjct: 309 QEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVY 368
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
N ++ L + G L+EA+ F +M ++ L +D +Y ++ KLD
Sbjct: 369 NSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLD 417
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 86/199 (43%), Gaps = 2/199 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+++ Y R D + V M +Y P+ + + L++ L + + EL+ +
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+ GV PD Y Y +++ E+ + + +G ++ YN + L + +
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFV 305
EA + +K LK D +Y ++ L + + +E++ +++ G + + +
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337
Query: 306 KGELSKEGREEEVVKLMEK 324
+G L K G E +L+ K
Sbjct: 338 EG-LIKMGSIEGAFELLNK 355
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 10/259 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG+ D ++ L+ G+ + + + + + GV D Y SL+ G
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDN--GVDPDVYTYNSLLNGLCKT 509
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E+ ME Y V + + + N +L++LC K D+AL L + MKN+ P +
Sbjct: 510 SKYEDVMETYKTMVEKGCAPNLFTF--NILLESLCRYHKLDKALGLLEEMKNKSVNPDAV 567
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE-YRCSPDTLSFNNLIDQLCKNGMLAEAE 179
+F + DG+C G A +FRKM E Y S T ++N +I + + AE
Sbjct: 568 -----TFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAE 622
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L+ EM D+ + PD YTY L++D + VD G + +M+++G P+L R++ L
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Query: 240 VQVGMLDEAKSFFDIMVKK 258
+ EA MV+K
Sbjct: 683 CVEDRVYEAAGIIHRMVQK 701
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 10/277 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ L+ G+ + G R+ + G V D Y SL+ G +G
Sbjct: 316 GLEPDSFTYNTLIAGYCKGGMVQLAERIL--VNAVFNGFVPDEFTYRSLIDGLCHEGETN 373
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ +NEA+G+ +K + + N+++ L N G EA +L M K L +
Sbjct: 374 RALALFNEALGK--GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSE-----KGLIPEV 426
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN++ +G C G DA + + M PD +FN LI + A E+
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M D GV+PD YTY L++ + ++ +D ++ MV+ G PNL +N L+ L +
Sbjct: 487 MMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHK 546
Query: 245 LDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLD 280
LD+A + M K + D ++ ++ G LD
Sbjct: 547 LDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 42/311 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV D Y L+ G +G+++ LF E K G+ + ++Y +L+KG +G+
Sbjct: 351 GFVPDEFTYRSLIDGLCHEGETNRALALFNEALGK--GIKPNVILYNTLIKGLSNQGLIL 408
Query: 65 EAMECYNEA-------------VGENSSVKMSAVAN--------------------NSVL 91
EA + +E + N KM V++ N ++
Sbjct: 409 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
K + AL++ D M + P ++ ++N + +G C +++D +E ++ M
Sbjct: 469 HGYSTQLKMENALEILDVMMDNGVDP-----DVYTYNSLLNGLCKTSKYEDVMETYKTMV 523
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
E C+P+ +FN L++ LC+ L +A L EM +K VNPD T+G L+D + +D
Sbjct: 524 EKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 212 DGATYFRKMVDSGL-RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
T FRKM + + + YN ++ + + A+ F MV + L D +Y+ M
Sbjct: 584 GAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 270 MKALSDGGKLD 280
+ G +D
Sbjct: 644 VDGFCKTGNVD 654
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 44/280 (15%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D ++ M F R RL + + G + V Y +++ G++ + +
Sbjct: 140 RGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQ--GCEMNVVAYCTVVGGFYEENFK 197
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+E E + + + S+ +S N +L LC G E KL D++ P N
Sbjct: 198 DEGYELFGKMLASGVSLCLSTF--NKLLHVLCKKGDVKECEKLLDKVIKRGVLP-----N 250
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L ++N G C +G A+ + ++ + PD +++N LI LCKN EAE G
Sbjct: 251 LFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLG 310
Query: 184 EMSDKGVNPD-----------------------------------EYTYGLLMDACFEVN 208
++ ++G+ PD E+TY L+D
Sbjct: 311 KLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEG 370
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+ F + + G++PN+ +YN L+ L G++ EA
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEA 410
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 120/265 (45%), Gaps = 41/265 (15%)
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+E +N E+ K + S+++ L GKF+ ++ M+ V +
Sbjct: 22 KALEMFNSMRKEDG-FKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYV 80
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
G+ Y +G+ ++A+ VF +M Y C P S+N ++ L +G +A ++Y
Sbjct: 81 GAMK----NYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMR 136
Query: 185 MSDKGVNPDEYTYGLLMDA-----------------------------C------FEVNR 209
M D+G+ PD Y++ + M + C +E N
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKF 268
D+G F KM+ SG+ L+ +N+L+ L + G + E + D ++K+ + + +Y F
Sbjct: 197 KDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNF 256
Query: 269 MMKALSDGGKLDEILEIVGGILDDG 293
++ L G+LD + +VG ++D G
Sbjct: 257 FIQGLCQKGELDAAVRMVGRLIDQG 281
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 38/276 (13%)
Query: 35 ELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL 94
++++ +G + +GV G+ MK Y KG +EA+ + + + + + N+++ L
Sbjct: 65 DMRQNVGNHMLEGVYVGA-MKNYGRKGKVQEAVNVFERM--DFYDCEPTVFSYNAIMSIL 121
Query: 95 CNNGKFDEALKLFDRMKNEHNPPK---------------------RLAVNLGS----FNV 129
++G FD+A K++ RM++ P RL N+ S NV
Sbjct: 122 VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNV 181
Query: 130 MADGYCG------QGRFKD-AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+A YC + FKD E+F KM S +FN L+ LCK G + E E+L
Sbjct: 182 VA--YCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLL 239
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
++ +GV P+ +TY + + +D +++D G +P++ YN L+ L +
Sbjct: 240 DKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKN 299
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
EA+ + +V + L+ D +Y ++ GG
Sbjct: 300 SKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGG 335
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 76/193 (39%), Gaps = 8/193 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + ++ L+ R D L EE+K K V D V +G+L+ G+
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNK--SVNPDAVTFGTLIDGFCKN 579
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A + + + E V S N ++ A A KLF M + P
Sbjct: 580 GDLDGAYTLFRK-MEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +M DG+C G + +M E P + +I+ LC + EA
Sbjct: 639 -----TYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAG 693
Query: 181 LYGEMSDKGVNPD 193
+ M KG+ P+
Sbjct: 694 IIHRMVQKGLVPE 706
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 10/278 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GFV S L+ G R G F L +K+ G + VY +L+ G +
Sbjct: 326 GFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKV--GAMPSLFVYNALINSLCKDGKFD 383
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA + E +GE + + V + ++D+ C GK D A+ +M + + +
Sbjct: 384 EAELLFKE-MGE-KGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMA-----GIKITV 436
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+N + +G+C G A+ F +M + P +S+ +LI C G L EA LY E
Sbjct: 437 YPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHE 496
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M+ KG+ P+ YT+ L+ A F NR+ D F +M++ + PN YN ++ + G
Sbjct: 497 MTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGN 556
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+A + MV+K L D +Y+ ++ +L G++ E
Sbjct: 557 TVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCE 594
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 137/284 (48%), Gaps = 12/284 (4%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY+ L+ +DG D LF+E+ EK G+ ++ V Y L+ + +G + A+
Sbjct: 368 VYNALINSLCKDGKFDEAELLFKEMGEK--GLCANDVTYSILIDSFCRRGKLDTAIHFLG 425
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+ + + +K++ NS+++ C G A+ FD M + K L + S+ +
Sbjct: 426 KMI--MAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMID-----KGLKPTVVSYTSLI 478
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
GYC +G+ +A ++ +M +P+T +F LI L + + +A L+ EM ++ +
Sbjct: 479 SGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMM 538
Query: 192 PDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+E TY ++++ C E N V +MV GL P+ Y L+ L G + EAK
Sbjct: 539 PNEVTYNVMIEGHCKEGNTV-KAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKK 597
Query: 251 FF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
F D+ + K+++ Y ++ G+L + L + ++ G
Sbjct: 598 FIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRG 641
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 149/321 (46%), Gaps = 12/321 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + ++ L+ R FRLF+E+ E+ ++ + V Y +++G+ +G
Sbjct: 500 KGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQ--NMMPNEVTYNVMIEGHCKEGNT 557
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A E N+ V + ++ +LC+ G+ EA K D + EH +N
Sbjct: 558 VKAFELLNQMV--QKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREH-----FKLN 610
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ + GYC +GR +DA+ V R+M + D + + LID K + L
Sbjct: 611 EMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLK 670
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M D+ + PD+ Y ++D + V + M+D G PN+ Y L+ +L + G
Sbjct: 671 NMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAG 730
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
++D+A+ + +++V + +Y + L+ G +++ +++ +L G + +
Sbjct: 731 LMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYN 789
Query: 303 EFVKGELSKEGREEEVVKLME 323
V+G K GR EE KL++
Sbjct: 790 ILVRG-FCKLGRVEEATKLLD 809
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 136/278 (48%), Gaps = 15/278 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ G +++ D+ VF L + + ++ + D V+Y S++ GY
Sbjct: 637 MVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQ--RLRPDKVIYTSMIDGYSKA 694
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A ++ + E + + V ++++ LC G D+A L+ M ++ P +
Sbjct: 695 GSVKKAFGIWDIMIDEGCTPNI--VTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHV 752
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ D +G + A+++ M + + +T+S+N L+ CK G + EA +
Sbjct: 753 -----TYCCFLDHLAREGSMEKAVQLHNDMLKGLLA-NTVSYNILVRGFCKLGRVEEATK 806
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM D + PD TY ++ C +D ++ M++ GL+P+ YN L+
Sbjct: 807 LLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCC 866
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
G L +A D M+++ +K + A++ K+LS G
Sbjct: 867 IAGELGKAFELRDDMIRRGVKPNQATH----KSLSHGA 900
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 8/206 (3%)
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
+V+ + C F +A ++ RM++ +N+ +NV+ G C R +A+E+
Sbjct: 233 AVIRSFCELKNFAKAKEMIQRMESSD-------LNVVVYNVLIHGLCKNKRVWEAVEIKN 285
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+ + + +++ L+ LCK + EM + G P E L++
Sbjct: 286 GLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKG 345
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
+V D ++ G P+L VYN L+ L + G DEA+ F M +K L +D +Y
Sbjct: 346 KVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYS 405
Query: 268 FMMKALSDGGKLDEILEIVGGILDDG 293
++ + GKLD + +G ++ G
Sbjct: 406 ILIDSFCRRGKLDTAIHFLGKMIMAG 431
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+++ Y + R D++ +FR M + P + +++ L K + L+GE+
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G+ PD Y Y ++ + E+ ++M S L N+ VYN L+ L + +
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVW 278
Query: 247 EAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD----GGIEFSEEL 301
EA + +++K L + +Y ++ L K+ E E+ G++D+ G + L
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLC---KVQE-FEVGAGVMDEMIELGFVPTEAAL 334
Query: 302 QEFVKGELSKEGREEEVVKLMEKKER 327
V+G L ++G+ + L+ + ++
Sbjct: 335 SSLVEG-LRRKGKVVDAFDLVNRVKK 359
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
+L F+ LI + + ++ ++ M + P T G +++ ++ RVD F
Sbjct: 158 SLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFG 217
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS---YKFMMKALSD 275
+++ G+RP++ +Y ++ ++ +AK M+++++ D + Y ++ L
Sbjct: 218 EILSMGIRPDIYIYVAVIRSFCELKNFAKAKE----MIQRMESSDLNVVVYNVLIHGLCK 273
Query: 276 GGKLDEILEIVGGILDDG 293
++ E +EI G++ G
Sbjct: 274 NKRVWEAVEIKNGLIQKG 291
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + + V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A LFD M + K L N
Sbjct: 189 EGFRLKNAM--QVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLD-----KGLVPNG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKG 395
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V G D YS L+ G ++ D LF+E+ +K G+V +GV + +L+ G+
Sbjct: 197 MQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDK--GLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM + G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 98/252 (38%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +LM + + + + F + LRP++ +N L+ +++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE + M V ++ D +Y ++ L K+D+ + +LD G +
Sbjct: 186 DLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 150/307 (48%), Gaps = 15/307 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P VY+Y M G + G +FEE++E+ GV + VV+ +L+ + +G +
Sbjct: 312 PDVYTYGAFMQGLCKAGRIQDAVEMFEEMRER--GVNPNTVVFTTLIDAHCKEGNVAAGL 369
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E + E +K VA N++ + LC A + + M+N P ++ ++
Sbjct: 370 ELHREMA--TRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKV-----TY 422
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ DG+C +G A+E+ ++M + + D +++ LI L K+G ++E + EM +
Sbjct: 423 TTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMME 482
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G+ PD TY +++DA + + V G ++M + G +P + YN ++ +G +
Sbjct: 483 AGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKN 542
Query: 248 AKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLD--EILEIVGGILDDGGIEFSEELQEF 304
A + M+ + DD +Y ++ GK+ E L+ G++ D G+ ++ + EF
Sbjct: 543 ADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKSAKGMVSDFGL-YTSLINEF 601
Query: 305 VKGELSK 311
VK + +K
Sbjct: 602 VKKKSTK 608
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 11/241 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N ++ + +GK A +FD M PP + +FN + G C A +
Sbjct: 248 NMLMRDMIRSGKLASARNMFDEMLRRGVPP-----TVVTFNTLMSGMCKASDLNSANALR 302
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M + +PD ++ + LCK G + +A E++ EM ++GVNP+ + L+DA +
Sbjct: 303 GLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKE 362
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
V G R+M G++ +L YN L L +V L A + M LK D +Y
Sbjct: 363 GNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTY 422
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR----EEEVVKLM 322
++ G+LD +E+ + D+ G+ E + LSK GR E + ++M
Sbjct: 423 TTLIDGFCKEGELDMAMEMKQEMSDE-GVALDEVTYTTLISGLSKSGRSVDSERILCEMM 481
Query: 323 E 323
E
Sbjct: 482 E 482
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 130/294 (44%), Gaps = 14/294 (4%)
Query: 41 GGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF 100
GV + + LM+ G A ++E + V + V N+++ +C
Sbjct: 238 AGVPPEAKQFNMLMRDMIRSGKLASARNMFDEML--RRGVPPTVVTFNTLMSGMCKASDL 295
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
+ A L M +A ++ ++ G C GR +DA+E+F +M E +P+T+
Sbjct: 296 NSANALRGLMAKAG-----VAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTV 350
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
F LID CK G +A EL+ EM+ +G+ D Y L + V + +M
Sbjct: 351 VFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEM 410
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK- 278
++GL+P+ Y L+ + G LD A M + + +D+ +Y ++ LS G+
Sbjct: 411 RNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRS 470
Query: 279 LDE---ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREK 329
+D + E++ L+ ++ + F K K G +++K M+ K R+
Sbjct: 471 VDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGF--KLLKEMQNKGRKP 522
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++++L+++L + EA Y ++ D GV P+ + +LM ++ F +M
Sbjct: 214 AWSDLMNRLPS---VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEM 270
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL 279
+ G+ P + +N L+ + + L+ A + +M K + D +Y M+ L G++
Sbjct: 271 LRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRI 330
Query: 280 DEILEI 285
+ +E+
Sbjct: 331 QDAVEM 336
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G + V Y+ LM G+ G + F LFEE++ GGV + Y L+ +
Sbjct: 64 MPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR--GGVEPNLYTYNCLIGEWCRT 121
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A ++E + + V+ N+++ LC +GK +A KL D M+ E P
Sbjct: 122 GEFERARSLFDEM--PVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRP--- 176
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +FN++ DGY G+ +A+ F +M P +++N LI C+ + A
Sbjct: 177 --SIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANR 234
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+M ++G+ P + TY +L+D+ N + M +GL + Y LV L
Sbjct: 235 ALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALC 294
Query: 241 QVGMLDEAKSFFDIMVKK 258
G + +A+ F M +K
Sbjct: 295 MEGNMKDARKLFQSMGEK 312
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 131/316 (41%), Gaps = 46/316 (14%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + L+ G + GD R+F+E+ L G+ + V Y +LM GYF G E+
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMP--LLGLAPNEVTYTALMHGYFTHGQREKG-- 92
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
LF+ M+ P NL ++N
Sbjct: 93 -----------------------------------FALFEEMRRGGVEP-----NLYTYN 112
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ +C G F+ A +F +M + +S+N LI LC++G L +A +L M +
Sbjct: 113 CLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE 172
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G P T+ LL+D + ++ + +F +M +G +P+ YN L+ + + A
Sbjct: 173 GTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRA 232
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
++ D+ + L+ +Y ++ + + + + EI+ G ++ G+E +
Sbjct: 233 NRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAG-MEKAGLEVDAHTYGVLVR 291
Query: 308 ELSKEGREEEVVKLME 323
L EG ++ KL +
Sbjct: 292 ALCMEGNMKDARKLFQ 307
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GF V Y+ L+ GF R D R ++KE+ G+ V Y L+ + +
Sbjct: 204 MKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKER--GLEPTKVTYTILIDSFARE 261
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A E A E + +++ A ++ ALC G +A KLF M + P +
Sbjct: 262 NHMGKAFEIL--AGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNV 319
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++M GY +G A+++ +M + P++ S+ I LCK+ EAE
Sbjct: 320 I-----YDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEA 374
Query: 181 LYGEM 185
L +M
Sbjct: 375 LLDDM 379
>gi|224287051|gb|ACN41226.1| unknown [Picea sitchensis]
Length = 243
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 105/195 (53%), Gaps = 6/195 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+V+D C G+ E L+ ++M E N L+ N S+ ++ GY G ++A +F
Sbjct: 4 NAVIDGCCKAGRMQEGLEYLEKM-GERN----LSPNAASYAILMSGYIELGELQEAERLF 58
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M C PD + +N L+++ + GM+A+AE L EM + +PD TY +L+D ++
Sbjct: 59 GSMVAKGCVPDAVMYNTLLNKYFREGMIADAERLLDEMVVERRDPDVDTYAMLIDEFSKL 118
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASY 266
+++ F +M++ G +P + VYN+ G L + G LDEA+ MV K D A+Y
Sbjct: 119 GKLEGALKIFGRMMEVGFKPEVGVYNKWFGVLCKEGKLDEAQKLVQAMVDGGQKADVATY 178
Query: 267 KFMMKALSDGGKLDE 281
+++ + G+ +E
Sbjct: 179 DVLIEGFGNEGRAEE 193
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
S+N + DG C GR ++ +E KMGE SP+ S+ L+ + G L EAE L+G M
Sbjct: 2 SYNAVIDGCCKAGRMQEGLEYLEKMGERNLSPNAASYAILMSGYIELGELQEAERLFGSM 61
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
KG PD Y L++ F + D +MV P++ Y L+ + ++G L
Sbjct: 62 VAKGCVPDAVMYNTLLNKYFREGMIADAERLLDEMVVERRDPDVDTYAMLIDEFSKLGKL 121
Query: 246 DEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
+ A F M++ K + Y L GKLDE ++V ++D G
Sbjct: 122 EGALKIFGRMMEVGFKPEVGVYNKWFGVLCKEGKLDEAQKLVQAMVDGGQKADVATYDVL 181
Query: 305 VKGELSKEGREEEVVKL 321
++G EGR EE L
Sbjct: 182 IEG-FGNEGRAEEAKSL 197
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 6/167 (3%)
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
+S+N +ID CK G + E E +M ++ ++P+ +Y +LM E+ + + F
Sbjct: 1 MSYNAVIDGCCKAGRMQEGLEYLEKMGERNLSPNAASYAILMSGYIELGELQEAERLFGS 60
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGK 278
MV G P+ +YN L+ K + GM+ +A+ D MV + + D +Y ++ S GK
Sbjct: 61 MVAKGCVPDAVMYNTLLNKYFREGMIADAERLLDEMVVERRDPDVDTYAMLIDEFSKLGK 120
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVK--GELSKEGREEEVVKLME 323
L+ L+I G +++ G F E+ + K G L KEG+ +E KL++
Sbjct: 121 LEGALKIFGRMMEVG---FKPEVGVYNKWFGVLCKEGKLDEAQKLVQ 164
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 9/182 (4%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ LM G++ G+ RLF + K G V D V+Y +L+ YF +GM +A +E
Sbjct: 38 YAILMSGYIELGELQEAERLFGSMVAK--GCVPDAVMYNTLLNKYFREGMIADAERLLDE 95
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
V E + A ++D GK + ALK+F RM P+ +G +N
Sbjct: 96 MVVERRDPDVDTYA--MLIDEFSKLGKLEGALKIFGRMMEVGFKPE-----VGVYNKWFG 148
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
C +G+ +A ++ + M + D +++ LI+ G EA+ L+ E KG
Sbjct: 149 VLCKEGKLDEAQKLVQAMVDGGQKADVATYDVLIEGFGNEGRAEEAKSLFLEFLQKGCLT 208
Query: 193 DE 194
+E
Sbjct: 209 EE 210
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 17/159 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVV----SDGVVYGSLMKG 56
M KG V D V+Y+ L+ + R+G RL +E+ VV D Y L+
Sbjct: 61 MVAKGCVPDAVMYNTLLNKYFREGMIADAERLLDEM------VVERRDPDVDTYAMLIDE 114
Query: 57 YFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+ G E A++ + + K N LC GK DEA KL M +
Sbjct: 115 FSKLGKLEGALKIFGRMM--EVGFKPEVGVYNKWFGVLCKEGKLDEAQKLVQAMVDGGQ- 171
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
++ +++V+ +G+ +GR ++A +F + + C
Sbjct: 172 ----KADVATYDVLIEGFGNEGRAEEAKSLFLEFLQKGC 206
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 141/325 (43%), Gaps = 46/325 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF K D V ++ L+ F ++G D V L E++ G + D + Y +++ G+
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH--GCMPDVITYTTVINGF--- 401
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
C G DEA+ L M + P
Sbjct: 402 ----------------------------------CKEGLIDEAVMLLKSMSSCGCKP--- 424
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N S+ ++ G C GR+ DA E+ +M + C P+ ++FN LI+ LCK G++ +A E
Sbjct: 425 --NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M G +PD +Y ++D + + ++ MV+ G+ PN +Y+ + L
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G +++ FD I ++ D Y ++ +L + D ++ ++ +G +
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+KG L+ EG +E +L+ +
Sbjct: 603 TYTMLIKG-LASEGLAKEAQELLSE 626
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 17/242 (7%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA-----VNLGSFNVMADGYCGQGRFKD 142
N VL+A+C G DEA+ L ++LA ++ S+N + G C R+ D
Sbjct: 185 NLVLNAICEQGCVDEAVGLL----------RKLAFFGCEADIVSYNAVLKGLCMAKRWGD 234
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
E+ +M C+P+ ++FN LI LC+NG+ E+ +MS+ G PD Y ++D
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID 294
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+ ++ +M GL+PN+ YN ++ L EA+ M +K +
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL 354
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
DD ++ ++ G +D ++E++ +L G + + G KEG +E V L
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING-FCKEGLIDEAVML 413
Query: 322 ME 323
++
Sbjct: 414 LK 415
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 166/386 (43%), Gaps = 62/386 (16%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGV-VSDGVVYGSLMKGYFMK 60
G AD V Y+ ++ G R GD EEL +++ V + +V + + GY +
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGD-------VEELMDEMVRVDCAPNIVTFNTLIGYLCR 263
Query: 61 -GMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G+ E E + G ++M A +++D +C G + A ++ +RM P
Sbjct: 264 NGLFERVHEVLAQMSEHGCTPDIRMYA----TIIDGICKEGHLEVANEILNRM-----PS 314
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
L N+ +N + G C R+K+A E+ +M + C D ++FN L+D C+NG++
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 178 AEELYGEMSDKGVNPDEYTY----------GLL---------MDAC-------------- 204
EL +M G PD TY GL+ M +C
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 205 --FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKM 261
R D +M+ G PN +N L+ L + G++++A ++V
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
D SY ++ L GK +E LE++ ++ + GI + + + LS+EGR +V+++
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELL-NVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553
Query: 322 ME--KKEREKAEAKAREAEAAEAAKR 345
+ K +++A A + KR
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSLCKR 579
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G +PV ++ L+ + G + L +++ + G D + Y +++ G
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML--VNGCSPDLISYSTVIDGLGKA 509
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA+E N V N + + + +S+ AL G+ ++ +++FD +K+ +
Sbjct: 510 GKTEEALELLNVMV--NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD-----TTI 562
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +N + C + AI+ F M C P+ ++ LI L G+ EA+E
Sbjct: 563 RSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQE 622
Query: 181 LYGEMSDKG 189
L E+ +G
Sbjct: 623 LLSELCSRG 631
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 7/202 (3%)
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
PP N +F + G C +GR DA+EV +M C+P ++ +++ C++G
Sbjct: 108 PP-----NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGF 162
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+ + M KG D L+++A E VD+ RK+ G ++ YN +
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAV 222
Query: 236 VGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+ L + + D MV+ + ++ ++ L G + + E++ + + G
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282
Query: 295 IEFSEELQEFVKGELSKEGREE 316
+ G + KEG E
Sbjct: 283 TPDIRMYATIIDG-ICKEGHLE 303
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 153/348 (43%), Gaps = 47/348 (13%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D Y+ LM G + G R+ +E++EK G + V Y +L+ + GM
Sbjct: 345 KGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEK--GCAPNIVTYSTLLHSFCRNGMW 402
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A ++ + S M++ N ++ AL +GK DEA++L MK++ P N
Sbjct: 403 DDARAMLDQMSAKGFS--MNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYN 460
Query: 124 LG------------------------------SFNVMADGYCGQGRFKDAIEVFRKMGEY 153
++N + GR+++ + + +M +
Sbjct: 461 TIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLH 520
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
C D +S+N LI LCK G + + L EM KG+ P+ ++Y +L++ + +V D
Sbjct: 521 GCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDA 580
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKA 272
++M++ GL P++ YN L+ L +VG A + + + + + D +Y ++
Sbjct: 581 LELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISW 640
Query: 273 LSDGGKLDEILEIVGGILD---DGGIEFSEE-----LQEFVKGELSKE 312
LD+ +LD GGI +E +Q FV+ ++ +
Sbjct: 641 HCKVRLLDD----ASMLLDKAVSGGIVPNERTWGMMVQNFVRQPVNPD 684
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 148/361 (40%), Gaps = 38/361 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLF--------------------------- 33
M + G V Y +L+ G R +D + +
Sbjct: 276 MMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARA 335
Query: 34 EELKEKLG--GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
EL E +G G D Y LM G G A+ +E E + V +++L
Sbjct: 336 TELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEM--EEKGCAPNIVTYSTLL 393
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ C NG +D+A + D+M K ++N +N + G+ +A+ + ++M
Sbjct: 394 HSFCRNGMWDDARAMLDQMSA-----KGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMK 448
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
C PD ++N +I LC N + EAE ++G + ++GV + TY L+ A R
Sbjct: 449 SQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQ 508
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMM 270
+G +MV G ++ YN L+ L + G +D + ++M K +K ++ SY ++
Sbjct: 509 EGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLI 568
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKA 330
L GK+ + LE+ +L+ G + G L K G + L+EK E
Sbjct: 569 NELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLING-LCKVGWTHAALNLLEKLPNENV 627
Query: 331 E 331
Sbjct: 628 H 628
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 151/325 (46%), Gaps = 15/325 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G AD ++ ++LG G RL + + + G V YG L++G
Sbjct: 241 MLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMM--MHGCTPSVVTYGFLLRGLCRT 298
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA +G V + V N+V+ GK A +L++ M ++ PP
Sbjct: 299 RQADEAYA----MLGRVPEVNV--VMLNTVIRGCLAEGKLARATELYEMMGSKGCPP--- 349
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N++ G C GR A+ + +M E C+P+ ++++ L+ C+NGM +A
Sbjct: 350 --DVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARA 407
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +MS KG + + Y ++ A + ++D+ ++M G +P++ YN ++ L
Sbjct: 408 MLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLC 467
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+DEA+ F +++ + + + +Y ++ AL G+ E L + ++ G
Sbjct: 468 NNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVV 527
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+K L KEG + + L+E+
Sbjct: 528 SYNGLIKA-LCKEGNVDRSMMLLEE 551
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 120/253 (47%), Gaps = 9/253 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF + Y+ ++ +DG D RL +E+K + G D Y +++
Sbjct: 412 MSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQ--GCKPDICTYNTIIYHLCNN 469
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA + + E V + + N+++ AL ++G++ E L+L + M P
Sbjct: 470 DQMDEAEHIFGNLLEE--GVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCP---- 523
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ S+N + C +G ++ + +M P+ S+N LI++LCK G + +A E
Sbjct: 524 -LDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALE 582
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM ++G+ PD TY L++ +V K+ + + P++ YN L+
Sbjct: 583 LSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHC 642
Query: 241 QVGMLDEAKSFFD 253
+V +LD+A D
Sbjct: 643 KVRLLDDASMLLD 655
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 5/165 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+VL L +AL L+ RM + PP +F V A C GR +DA+ +
Sbjct: 149 NAVLSTLARADCHADALLLYRRMLRDRVPPTTF-----TFGVAARALCRLGRARDALALL 203
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
R M + C PD + + +I L G +AEA L EM G D T+ ++ +
Sbjct: 204 RGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGL 263
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
V + A +M+ G P++ Y L+ L + DEA +
Sbjct: 264 GHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAML 308
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 15/229 (6%)
Query: 102 EALKLFDRMKNEHNPPKRLAV--NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
AL L D+M P+R AV + S+N + DA+ ++R+M R P T
Sbjct: 127 RALHLLDQM------PRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTT 180
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
+F LC+ G +A L M+ G PD Y ++ A V + AT +
Sbjct: 181 FTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDE 240
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGK 278
M+ G ++ +N +V L +G + EA D +M+ +Y F+++ L +
Sbjct: 241 MLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQ 300
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELS--KEGREEEVVKLMEKK 325
DE ++G + + + L ++G L+ K R E+ ++M K
Sbjct: 301 ADEAYAMLGRVPEVNVV----MLNTVIRGCLAEGKLARATELYEMMGSK 345
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 10/272 (3%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y L+ GF + G + L +++ L GV + +++ +++ GY GM ++A+E
Sbjct: 275 TYGALINGFCKIGQIEAAEMLLTDMQ--LRGVGHNQIIFNTMIDGYCRHGMVDKALEI-- 330
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+AV E +++ N++ LC + ++A KL M + N S+ +
Sbjct: 331 KAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG-----VESNYVSYTTLI 385
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
+ +G +A +FR M P +++N +ID K+G + EAE EM KG+
Sbjct: 386 SIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLV 445
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
PD YTY L+ +VD F +M G +PN+ Y L+ L + G +EA F
Sbjct: 446 PDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQF 505
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLDEI 282
+D M+ L DD Y ++ +L + DEI
Sbjct: 506 YDNMLAAGLTPDDTLYSMLVGSLHTDKRKDEI 537
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 109/243 (44%), Gaps = 7/243 (2%)
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
++ ++ + V+D C G+ D+A +L D M P + +N +N + D Y Q
Sbjct: 131 ITPLSASVVVDGFCKAGRMDDARRLLDEM-----PRHGVKLNACCYNPLLDTYTRQKNDA 185
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
EV ++M P ++ L+D L G +++ E ++ E+ K V D Y Y ++
Sbjct: 186 RVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVI 245
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLK 260
+A V + F + V +G+ PN Y L+ ++G ++ A+ D+ ++ +
Sbjct: 246 NAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVG 305
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
+ + M+ G +D+ LEI +++ GI+ + L + R E+ K
Sbjct: 306 HNQIIFNTMIDGYCRHGMVDKALEI-KAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKK 364
Query: 321 LME 323
L+
Sbjct: 365 LLH 367
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 146/385 (37%), Gaps = 81/385 (21%)
Query: 10 PVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMEC 69
P+ S ++ GF + G D RL +E+ GV + Y L+ Y + + E
Sbjct: 133 PLSASVVVDGFCKAGRMDDARRLLDEMPRH--GVKLNACCYNPLLDTYTRQKNDARVAEV 190
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
E E+ V+ + ++D L G + +FD +K K +A ++ ++
Sbjct: 191 LKEM--ESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKR-----KNVAGDVYFYSA 243
Query: 130 MADGYCGQGRFKDAIEVFR----------------------KMGEYRCSPDTLS------ 161
+ + YC G + A EVF K+G+ + L+
Sbjct: 244 VINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRG 303
Query: 162 -------FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG- 213
FN +ID C++GM+ +A E+ M G+ D YTY L VNR++D
Sbjct: 304 VGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAK 363
Query: 214 ---------------ATY-------------------FRKMVDSGLRPNLAVYNRLVGKL 239
+Y FR M G RP++ YN ++
Sbjct: 364 KLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGY 423
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
++ G + EA+ F M KK L D +Y ++ GK+D L + + G
Sbjct: 424 IKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNV 483
Query: 299 EELQEFVKGELSKEGREEEVVKLME 323
+ G L+KEGR EE + +
Sbjct: 484 VAYTALISG-LAKEGRSEEAFQFYD 507
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V D Y+ L+ G +G D RLFEE+K++ G + V Y +L+ G +G
Sbjct: 442 KGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQR--GAKPNVVAYTALISGLAKEGRS 499
Query: 64 EEAMECYN 71
EEA + Y+
Sbjct: 500 EEAFQFYD 507
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 136/280 (48%), Gaps = 16/280 (5%)
Query: 23 DGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKM 82
DG D ++F E+ ++ G D YG+L+ G G +EA + + E V ++ +
Sbjct: 170 DGTVDAGLKIFHEMPKR--GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP-- 225
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+ V S+++ LC + DEA++ + MK + P N+ +++ + DG C GR
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEP-----NVFTYSSLMDGLCKDGRSLQ 280
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+E+F M C P+ +++ LI LCK + EA EL M+ +G+ PD YG ++
Sbjct: 281 AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVIS 340
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV--GMLDEAKS-----FFDIM 255
V++ + A + +M+ G+ PN +N V +V G+ S + +
Sbjct: 341 GFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLSMR 400
Query: 256 VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+ + ++ + ++K L G+ + +++V I+ DG I
Sbjct: 401 SRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCI 440
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 88 NSVLDALC-NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N ++ ALC N+G D LK+F M P ++ + G C GR +A ++
Sbjct: 160 NVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSY-----TYGTLISGLCRFGRIDEAKKL 214
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F +M E C+P +++ +LI+ LC + + EA EM KG+ P+ +TY LMD +
Sbjct: 215 FTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCK 274
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDAS 265
R F M+ G RPN+ Y L+ L + + EA D M ++ LK D
Sbjct: 275 DGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGL 334
Query: 266 YKFMMKALSDGGK-------LDEILEIVGGI 289
Y ++ K LDE+ I+GGI
Sbjct: 335 YGKVISGFCAVSKFREAANFLDEM--ILGGI 363
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 108/268 (40%), Gaps = 43/268 (16%)
Query: 94 LCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
L + KF A + RMK E+ V+ + GY R D++ VF KM ++
Sbjct: 61 LVSANKFKAAEDIVARMKIEN-----CVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF 115
Query: 154 RC-----------------------------------SPDTLSFNNLIDQLCKN-GMLAE 177
C P S N LI LC+N G +
Sbjct: 116 DCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDA 175
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
+++ EM +G +PD YTYG L+ R+D+ F +MV+ P + Y L+
Sbjct: 176 GLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLIN 235
Query: 238 KLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
L +DEA + + M K ++ + +Y +M L G+ + +E+ ++ G
Sbjct: 236 GLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP 295
Query: 297 FSEELQEFVKGELSKEGREEEVVKLMEK 324
+ G L KE + +E V+L+++
Sbjct: 296 NMVTYTTLITG-LCKEQKIQEAVELLDR 322
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 17/245 (6%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G + D R EE+K K G+ + Y SLM G G +AME +
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYVEEMKGK--GIEPNVFTYSSLMDGLCKDGRSLQAMELF 285
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ M V +++ LC K EA++L DRM + P + G + +
Sbjct: 286 EMMMARGCRPNM--VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKP-----DAGLYGKV 338
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFN-------NLIDQLCKNGMLAEAEELYG 183
G+C +F++A +M +P+ L++N ++ LC N + A LY
Sbjct: 339 ISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTN-YPSRAFTLYL 397
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +G++ + T L+ + ++V G PN + L+G +
Sbjct: 398 SMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNT 457
Query: 244 MLDEA 248
++ EA
Sbjct: 458 IVGEA 462
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 7/200 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + YS LM G +DG S LFE + + G + V Y +L+ G +
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR--GCRPNMVTYTTLITGLCKEQKI 313
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA+E + +K A V+ C KF EA D M P RL N
Sbjct: 314 QEAVELLDRM--NLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWN 371
Query: 124 LG--SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+ + N + G C + A ++ M S + + ++L+ LCK G +A +L
Sbjct: 372 IHVKTSNEVVRGLCTNYPSR-AFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQL 430
Query: 182 YGEMSDKGVNPDEYTYGLLM 201
E+ G P++ T+ LL+
Sbjct: 431 VDEIVTDGCIPNKGTWKLLI 450
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 139/283 (49%), Gaps = 10/283 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D S L+ G ++G + + + L E G+V V+Y +++ GY G
Sbjct: 236 KGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEH--GLVPGEVIYNTIVNGYCQIGDM 293
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ A+ + E+ ++ + +A NSV+D C D+A + +M K +A +
Sbjct: 294 DRAILTIEQM--ESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVG-----KGIAPS 346
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N++ DGY F ++ +M E P+ +S+ +LI+ LCK+G + EAE +
Sbjct: 347 VETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLR 406
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M +GV P+ Y +L+D V ++ + +F +M +G+ + YN L+ L ++G
Sbjct: 407 DMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMG 466
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEI 285
L EA+ F ++ D +Y ++ S+ G + LE+
Sbjct: 467 KLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLEL 509
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 51/293 (17%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D +VY ML V+ GD LFE +K + VV + VY L+ G +
Sbjct: 61 GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRR--KVVPNVFVYNVLIGGLCKEKRIR 118
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A + + E N + + V N+++D C G+ D A+ L +RMK E P ++
Sbjct: 119 DAEKLFGEMSVRN--LVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEP-----SI 171
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS---PDTLSFNNLIDQL------------ 169
+FN + G C R ++A + + E +C+ PD +++ + D L
Sbjct: 172 ITFNSLLSGLCKARRIEEARCM---LNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALD 228
Query: 170 ------------------------CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
CK G + +AEE+ + + G+ P E Y +++
Sbjct: 229 LYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYC 288
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
++ +D +M GLRPN +N ++ K ++ M+D+A+ + MV K
Sbjct: 289 QIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGK 341
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 147/353 (41%), Gaps = 41/353 (11%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G V V+Y+ ++ G+ + GD D E+++ + G+ + + + S++ + M
Sbjct: 271 HGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESR--GLRPNCIAFNSVIDKFCEMQMI 328
Query: 64 EEAMECYNEAVG---------------------------------ENSSVKMSAVANNSV 90
++A E + VG E + K + ++ S+
Sbjct: 329 DKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSL 388
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
++ LC +GK EA + M P N +N++ DG C G+ ++A+ F +M
Sbjct: 389 INCLCKDGKILEAEMVLRDMVGRGVLP-----NANIYNMLIDGSCTVGKLREALRFFDEM 443
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+ +++N+LI LCK G L EAEE++ ++ G PD TY L+
Sbjct: 444 SKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNS 503
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM 270
+ M GL+P + ++ L+ + G+ + F +++ L D Y M+
Sbjct: 504 QKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMI 563
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+ G + + + ++D G ++ + G L KEG+ E L++
Sbjct: 564 HCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHL-KEGKLSETKDLVD 615
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 115/242 (47%), Gaps = 10/242 (4%)
Query: 36 LKEKLG-GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL 94
L++ +G GV+ + +Y L+ G G EA+ ++E + + + V NS++ L
Sbjct: 405 LRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEM--SKNGIGATIVTYNSLIKGL 462
Query: 95 CNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
C GK EA ++F + + + P ++ ++N + GY G + +E++ M +
Sbjct: 463 CKMGKLKEAEEMFFLITSTGHCP-----DVITYNSLISGYSNAGNSQKCLELYETMKKLG 517
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
P +F+ LI K G+ + E L+ EM ++PD Y ++ E V
Sbjct: 518 LKPTINTFHPLISGCSKEGIKLK-ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAF 576
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKAL 273
+ ++MVD G+RP+ YN L+ ++ G L E K D M K + +A +Y +++
Sbjct: 577 SLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGH 636
Query: 274 SD 275
D
Sbjct: 637 CD 638
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 37/287 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + +Y+ L+ G G R F+E+ + G+ + V Y SL+KG
Sbjct: 408 MVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKN--GIGATIVTYNSLIKGLCKM 465
Query: 61 GMEEEAMECY--NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------- 111
G +EA E + + G V + NS++ N G + L+L++ MK
Sbjct: 466 GKLKEAEEMFFLITSTGHCPDV----ITYNSLISGYSNAGNSQKCLELYETMKKLGLKPT 521
Query: 112 -NEHNP-----------------PKRLAVNLGS----FNVMADGYCGQGRFKDAIEVFRK 149
N +P + L +NL +N M Y G + A + ++
Sbjct: 522 INTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKE 581
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M + PD ++N+LI K G L+E ++L +M KG+ P+ TY LL+ ++
Sbjct: 582 MVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKD 641
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
+ ++R+M+++G PN+ + N L L + G L EA+S M+
Sbjct: 642 FNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMI 688
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 27 DGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAV 85
D V LF KE +G G D +VYG M G + AME + + V +
Sbjct: 48 DNVLDLF---KEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETM--KRRKVVPNVF 102
Query: 86 ANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIE 145
N ++ LC + +A KLF M + P R+ +FN + DGYC G AI
Sbjct: 103 VYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRV-----TFNTLIDGYCKAGEVDVAIG 157
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+ +M + + P ++FN+L+ LCK + EA + E+ G PD +TY ++ D
Sbjct: 158 LRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLL 217
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS 265
+ DDGA L +Y +GK V K+D+ +
Sbjct: 218 ---KSDDGAG-----------AALDLYREAIGKGV-------------------KIDNYT 244
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDG 293
++ L GK+++ E++ +++ G
Sbjct: 245 CSILLNGLCKEGKVEKAEEVLKSLVEHG 272
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 19/240 (7%)
Query: 90 VLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRK 149
++++L + KFD L LF M P +L + G K A+E+F
Sbjct: 37 IVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVK-----LGDLKLAMELFET 91
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M + P+ +N LI LCK + +AE+L+GEMS + + P+ T+ L+D +
Sbjct: 92 MKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGE 151
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKF 268
VD +M + P++ +N L+ L + ++EA+ + I D +Y
Sbjct: 152 VDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSI 211
Query: 269 MMKAL--SD---GGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG---REEEVVK 320
+ L SD G LD E +G G++ + L KEG + EEV+K
Sbjct: 212 IFDGLLKSDDGAGAALDLYREAIG-----KGVKIDNYTCSILLNGLCKEGKVEKAEEVLK 266
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 84/220 (38%), Gaps = 41/220 (18%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG----------------------- 41
G D + Y+ L+ G+ G+S L+E +K KLG
Sbjct: 482 GHCPDVITYNSLISGYSNAGNSQKCLELYETMK-KLGLKPTINTFHPLISGCSKEGIKLK 540
Query: 42 ----------GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
+ D VVY +++ Y G ++A E V + V+ NS++
Sbjct: 541 ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMV--DMGVRPDNKTYNSLI 598
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
GK E L D MK K L +++++ G+C F A +R+M
Sbjct: 599 LGHLKEGKLSETKDLVDDMK-----AKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREML 653
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
E P+ N L L K+G L EA+ + EM G++
Sbjct: 654 ENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGMD 693
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G + V Y+ LM G+ G + F LFEE++ GGV + Y L+ +
Sbjct: 64 MPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR--GGVEPNLYTYNCLIGEWCRT 121
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A ++E + + V+ N+++ LC +GK +A KL D M+ E P
Sbjct: 122 GEFERARSLFDEM--PVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRP--- 176
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +FN++ DGY G+ +A+ F +M P +++N LI C+ + A
Sbjct: 177 --SIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANR 234
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+M ++G+ P + TY +L+D+ N + M +GL + Y LV L
Sbjct: 235 ALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALC 294
Query: 241 QVGMLDEAKSFFDIMVKK 258
G + +A+ F M +K
Sbjct: 295 MEGNMKDARKLFQSMGEK 312
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 131/316 (41%), Gaps = 46/316 (14%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + L+ G + GD R+F+E+ L G+ + V Y +LM GYF G E+
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMP--LLGLAPNEVTYTALMHGYFTHGQREKG-- 92
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
LF+ M+ P NL ++N
Sbjct: 93 -----------------------------------FALFEEMRRGGVEP-----NLYTYN 112
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ +C G F+ A +F +M + +S+N LI LC++G L +A +L M +
Sbjct: 113 CLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE 172
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G P T+ LL+D + ++ + +F +M +G +P+ YN L+ + + A
Sbjct: 173 GTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRA 232
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
++ D+ + L+ +Y ++ + + + + EI+ G ++ G+E +
Sbjct: 233 NRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAG-MEKAGLEVDAHTYGVLVR 291
Query: 308 ELSKEGREEEVVKLME 323
L EG ++ KL +
Sbjct: 292 ALCMEGNMKDARKLFQ 307
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GF V Y+ L+ GF R D R ++KE+ G+ V Y L+ + +
Sbjct: 204 MKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKER--GLEPTKVTYTILIDSFARE 261
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A E A E + +++ A ++ ALC G +A KLF M + P +
Sbjct: 262 NHMGKAFEIL--AGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNV 319
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++M GY +G A+++ +M + P++ S+ I LCK+ EAE
Sbjct: 320 I-----YDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEA 374
Query: 181 LYGEM 185
L +M
Sbjct: 375 LLDDM 379
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 144/295 (48%), Gaps = 17/295 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGM 62
+G + + V YS L+ G + + D R+ L++ +G GV + + Y L+ GY GM
Sbjct: 182 QGIMPNVVTYSSLINGLCKTKEMDKAERV---LRQMVGAGVRPNNMTYNCLIHGYSTSGM 238
Query: 63 EEEAMECYNEAVGENSSVKMSAVAN-NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
+E++ + E +SS+ + V N NS + ALC +G+ EA +FD M + P
Sbjct: 239 WKESVRVFKEM---SSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKP---- 291
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ S+ + GY G +F M PD FN LI+ + GM+ ++ +
Sbjct: 292 -DVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 350
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ +M+ +GVNPD T+ ++ A + R+DD F M+D+G+ P+ AVY+ L+
Sbjct: 351 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 410
Query: 242 VGMLDEAKSFFDIMVKKLKMDDASYKF---MMKALSDGGKLDEILEIVGGILDDG 293
L +AK M+ K + KF ++ L G++ E ++V I+ G
Sbjct: 411 RRDLVKAKELISDMLSK-GIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 464
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 147/308 (47%), Gaps = 12/308 (3%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
A P +Y+Y +L + R D +F L G+ D Y +L+ G+ +G ++
Sbjct: 114 AAPTIYTYNILINCYRRARRPDLGLPVFGRLLRT--GLGPDVFSYNALIDGFSKEGEVDK 171
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A + + + E + + V +S+++ LC + D+A ++ +M P +
Sbjct: 172 AHDLFYKM--EEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNM----- 224
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + GY G +K+++ VF++M PD + N+ + LCK+G + EA +++ M
Sbjct: 225 TYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSM 284
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
KG PD +YG L+ + F MV G+ P+ V+N L+ ++GM+
Sbjct: 285 VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMM 344
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
D++ F+ M K+ + D ++ ++ A G+LD+ +E ++D G +
Sbjct: 345 DKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCL 404
Query: 305 VKGELSKE 312
++G+ ++
Sbjct: 405 IQGQCNRR 412
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 156/367 (42%), Gaps = 37/367 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G V D V++ L+ + R G D +FE++ ++ GV D + + +++ +
Sbjct: 319 MVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQ--GVNPDIITFSTVISAFCRL 376
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-- 118
G ++AME +N + ++ V + ++ CN +A +L M ++ PP
Sbjct: 377 GRLDDAMEKFNHMI--DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCI 434
Query: 119 --------------RLA---------------VNLGSFNVMADGYCGQGRFKDAIEVFRK 149
R+A NL +FN + DGYC G K+A+ +
Sbjct: 435 KFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDS 494
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M PD ++N L+D CK+G + +A L+ +M K V +Y +++ F+ R
Sbjct: 495 MESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARR 554
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKF 268
F +M++SG+ ++ Y ++G L + DEA + + +K D ++
Sbjct: 555 TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNI 614
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
+++A+ G+ E E+ I G + + + L KE E+ L E+
Sbjct: 615 VIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMIT-NLIKEESFEDADNLFSSMEKS 673
Query: 329 KAEAKAR 335
+R
Sbjct: 674 SCTPDSR 680
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 43/275 (15%)
Query: 48 VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF 107
+ + SL+ GY + G +EA+ + E+ V+ N+++D C +G+ D+AL LF
Sbjct: 470 ITFNSLVDGYCLVGNMKEAVGLLDSM--ESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 527
Query: 108 DRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY-------------- 153
M + KR+ + S+N++ G R A E+F +M E
Sbjct: 528 RDMLH-----KRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLG 582
Query: 154 -----RCSP----------------DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
C+ D L+FN +I + K G EA+EL+ +S G+ P
Sbjct: 583 GLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVP 642
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
TY +++ + +D F M S P+ + N ++ L+ G + +A ++
Sbjct: 643 TILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYL 702
Query: 253 DIMVKKLKMDDASYKFMMKAL-SDGGKLDEILEIV 286
+ KK + +A+ ++ L S GK E ++++
Sbjct: 703 SKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 737
>gi|47497141|dbj|BAD19190.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
gi|47497588|dbj|BAD19658.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
Length = 462
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 144/313 (46%), Gaps = 11/313 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ R + + ++E GV D V Y SL+ G +G+
Sbjct: 42 GLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRMRE--AGVEPDAVTYNSLIAGAARRGLPI 99
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ ++E + S + + + N ++ L +G ++A ++F M + P
Sbjct: 100 HALDLFDEML--RSGIAPDSWSYNPLMHCLFRSGHPEDAYRVFADMAEKGIAPCD----- 152
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG G +A +FR + +++N +I+ LC +G + A + E
Sbjct: 153 TTYNTLLDGMFRAGYAMNAYRMFRYLQRAGLPVSIVTYNTMINGLCSSGKVGYARMVLRE 212
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ P+ TY +M CF+ R + G F ++D G ++ Y ++ LV+ G
Sbjct: 213 LGRTDHAPNIITYTAVMKCCFKYGRFEQGLDTFLSLLDRGYISDVYPYCTVISALVKKGR 272
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L EA ++ D+M++ ++D Y ++ GKLD+ E+V +++DGG+E E
Sbjct: 273 LGEANNYCDLMLQNGSRLDSVCYNTLIHMRCQEGKLDDAFELV-SMMEDGGLESDEYTFA 331
Query: 304 FVKGELSKEGREE 316
+ L K G E
Sbjct: 332 ILVNGLCKMGHIE 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 130/314 (41%), Gaps = 49/314 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ LM R G + +R+F ++ EK G+ Y +L+ G F
Sbjct: 108 MLRSGIAPDSWSYNPLMHCLFRSGHPEDAYRVFADMAEK--GIAPCDTTYNTLLDGMFRA 165
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
G A + + + + +S V N++++ LC++GK A + + + +H P
Sbjct: 166 GYAMNAYRMFRYL--QRAGLPVSIVTYNTMINGLCSSGKVGYARMVLRELGRTDHAP--- 220
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFR-------------------------KMGEYR 154
N+ ++ + GRF+ ++ F ++GE
Sbjct: 221 ---NIITYTAVMKCCFKYGRFEQGLDTFLSLLDRGYISDVYPYCTVISALVKKGRLGEAN 277
Query: 155 --C--------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
C D++ +N LI C+ G L +A EL M D G+ DEYT+ +L++
Sbjct: 278 NYCDLMLQNGSRLDSVCYNTLIHMRCQEGKLDDAFELVSMMEDGGLESDEYTFAILVNGL 337
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA 264
++ ++ M G++ N+ YN LV L + +D A M KLK DD
Sbjct: 338 CKMGHIEAAEKQLFYMEIKGMQSNVVAYNCLVDALCKFQEVDAAIRLLQCM--KLK-DDF 394
Query: 265 SYKFMMKALSDGGK 278
+Y ++ L G+
Sbjct: 395 TYTSLVHGLCRVGR 408
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
G R T N + LC+ G LA AE + + G+ PD TY L+ A +
Sbjct: 4 GRGRWLLPTRLLNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGL 63
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+ G +M ++G+ P+ YN L+ + G+ A FD M++ + D SY +
Sbjct: 64 EAGLVVMGRMREAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPL 123
Query: 270 MKALSDGGKLDEILEIVGGILDDG 293
M L G ++ + + + G
Sbjct: 124 MHCLFRSGHPEDAYRVFADMAEKG 147
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 7/162 (4%)
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P RL NV C G A V PD +++N L+ C+ L
Sbjct: 11 PTRL------LNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLE 64
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ G M + GV PD TY L+ F +M+ SG+ P+ YN L+
Sbjct: 65 AGLVVMGRMREAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPLM 124
Query: 237 GKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGG 277
L + G ++A + F D+ K + D +Y ++ + G
Sbjct: 125 HCLFRSGHPEDAYRVFADMAEKGIAPCDTTYNTLLDGMFRAG 166
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G + V Y+ LM G+ G + F LFEE++ GGV + Y L+ +
Sbjct: 64 MPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR--GGVEPNLYTYNCLIGEWCRT 121
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A ++E + + V+ N+++ LC +GK +A KL D M+ E P
Sbjct: 122 GEFERARSLFDEM--PVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRP--- 176
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +FN++ DGY G+ +A+ F +M P +++N LI C+ + A
Sbjct: 177 --SIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANR 234
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+M ++G+ P + TY +L+D+ N + M +GL + Y LV L
Sbjct: 235 ALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALC 294
Query: 241 QVGMLDEAKSFFDIMVKK 258
G + +A+ F M +K
Sbjct: 295 MEGNMKDARKLFQSMGEK 312
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 131/316 (41%), Gaps = 46/316 (14%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + L+ G + GD R+F+E+ L G+ + V Y +LM GYF G E+
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMP--LLGLAPNEVTYTALMHGYFTHGQREKG-- 92
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
LF+ M+ P NL ++N
Sbjct: 93 -----------------------------------FALFEEMRRGGVEP-----NLYTYN 112
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ +C G F+ A +F +M + +S+N LI LC++G L +A +L M +
Sbjct: 113 CLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE 172
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G P T+ LL+D + ++ + +F +M +G +P+ YN L+ + + A
Sbjct: 173 GTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRA 232
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
++ D+ + L+ +Y ++ + + + + EI+ G ++ G+E +
Sbjct: 233 NRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAG-MEKAGLEVDAHTYGVLVR 291
Query: 308 ELSKEGREEEVVKLME 323
L EG ++ KL +
Sbjct: 292 ALCMEGNMKDARKLFQ 307
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 108/266 (40%), Gaps = 34/266 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G V + V Y+ L+ G R G +L + ++ + G + + L+ GY
Sbjct: 134 MPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE--GTRPSIITFNLLVDGYGKA 191
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR- 119
G A+ +N+ + + + SAV N ++ C A + MK P +
Sbjct: 192 GKMSNALPFFNQM--KAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKV 249
Query: 120 -----------------------------LAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
L V+ ++ V+ C +G KDA ++F+ M
Sbjct: 250 TYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSM 309
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
GE P + ++ +I + G +A +L EM KG+ P+ +YGL + + ++
Sbjct: 310 GEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKC 369
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLV 236
+ MV +GL+ + ++ L+
Sbjct: 370 QEAEALLDDMVRAGLQTSESICQALL 395
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GF V Y+ L+ GF R D R ++KE+ G+ V Y L+ + +
Sbjct: 204 MKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKER--GLEPTKVTYTILIDSFARE 261
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A E A E + +++ A ++ ALC G +A KLF M + P +
Sbjct: 262 NHMGKAFEIL--AGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNV 319
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++M GY +G A+++ +M + P++ S+ I LCK+ EAE
Sbjct: 320 I-----YDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEA 374
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA 203
L +M G+ E L+DA
Sbjct: 375 LLDDMVRAGLQTSESICQALLDA 397
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 141/325 (43%), Gaps = 46/325 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF K D V ++ L+ F ++G D V L E++ G + D + Y +++ G+
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH--GCMPDVITYTTVINGF--- 401
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
C G DEA+ L M + P
Sbjct: 402 ----------------------------------CKEGLIDEAVMLLKSMSSCGCKP--- 424
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N S+ ++ G C GR+ DA E+ +M + C P+ ++FN LI+ LCK G++ +A E
Sbjct: 425 --NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M G +PD +Y ++D + + ++ MV+ G+ PN +Y+ + L
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G +++ FD I ++ D Y ++ +L + D ++ ++ +G +
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+KG L+ EG +E +L+ +
Sbjct: 603 TYTMLIKG-LASEGLAKEAQELLSE 626
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 17/242 (7%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA-----VNLGSFNVMADGYCGQGRFKD 142
N VL+A+C G DEA+ L ++LA ++ S+N + G C R+ D
Sbjct: 185 NLVLNAICEQGCVDEAVGLL----------RKLAFFGCEADIVSYNAVLKGLCMAKRWGD 234
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
E+ +M C+P+ ++FN LI LC+NG+ E+ +MS+ G PD Y ++D
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID 294
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+ ++ +M GL+PN+ YN ++ L EA+ M +K +
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL 354
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
DD ++ ++ G +D ++E++ +L G + + G KEG +E V L
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING-FCKEGLIDEAVML 413
Query: 322 ME 323
++
Sbjct: 414 LK 415
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 166/386 (43%), Gaps = 62/386 (16%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGV-VSDGVVYGSLMKGYFMK 60
G AD V Y+ ++ G R GD EEL +++ V + +V + + GY +
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGD-------VEELMDEMVRVDCAPNIVTFNTLIGYLCR 263
Query: 61 -GMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G+ E E + G ++M A +++D +C G + A ++ +RM P
Sbjct: 264 NGLFERVHEVLAQMSEHGCTPDIRMYA----TIIDGICKEGHLEVANEILNRM-----PS 314
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
L N+ +N + G C R+K+A E+ +M + C D ++FN L+D C+NG++
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 178 AEELYGEMSDKGVNPDEYTY----------GLL---------MDAC-------------- 204
EL +M G PD TY GL+ M +C
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 205 --FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKM 261
R D +M+ G PN +N L+ L + G++++A ++V
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
D SY ++ L GK +E LE++ ++ + GI + + + LS+EGR +V+++
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELL-NVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553
Query: 322 ME--KKEREKAEAKAREAEAAEAAKR 345
+ K +++A A + KR
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSLCKR 579
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G +PV ++ L+ + G + L +++ + G D + Y +++ G
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML--VNGCSPDLISYSTVIDGLGKA 509
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA+E N V N + + + +S+ AL G+ ++ +++FD +K+ +
Sbjct: 510 GKTEEALELLNVMV--NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD-----TTI 562
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +N + C + AI+ F M C P+ ++ LI L G+ EA+E
Sbjct: 563 RSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQE 622
Query: 181 LYGEMSDKG 189
L E+ +G
Sbjct: 623 LLSELCSRG 631
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 7/202 (3%)
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
PP N +F + G C +GR DA+EV +M C+P ++ +++ C++G
Sbjct: 108 PP-----NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGF 162
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+ + M KG D L+++A E VD+ RK+ G ++ YN +
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAV 222
Query: 236 VGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+ L + + D MV+ + ++ ++ L G + + E++ + + G
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282
Query: 295 IEFSEELQEFVKGELSKEGREE 316
+ G + KEG E
Sbjct: 283 TPDIRMYATIIDG-ICKEGHLE 303
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 141/325 (43%), Gaps = 46/325 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF K D V ++ L+ F ++G D V L E++ G + D + Y +++ G+
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH--GCMPDVITYTTVINGF--- 401
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
C G DEA+ L M + P
Sbjct: 402 ----------------------------------CKEGLIDEAVMLLKSMSSCGCKP--- 424
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N S+ ++ G C GR+ DA E+ +M + C P+ ++FN LI+ LCK G++ +A E
Sbjct: 425 --NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M G +PD +Y ++D + + ++ MV+ G+ PN +Y+ + L
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G +++ FD I ++ D Y ++ +L + D ++ ++ +G +
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+KG L+ EG +E +L+ +
Sbjct: 603 TYTMLIKG-LASEGLAKEAQELLSE 626
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 17/242 (7%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA-----VNLGSFNVMADGYCGQGRFKD 142
N VL+A+C G DEA+ L ++LA ++ S+N + G C R+ D
Sbjct: 185 NLVLNAICEQGCVDEAVGLL----------RKLAFFGCEADIVSYNAVLKGLCMAKRWGD 234
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
E+ +M C+P+ ++FN LI LC+NG+ E+ +MS+ G PD Y ++D
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID 294
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+ ++ +M GL+PN+ YN ++ L EA+ M +K +
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL 354
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
DD ++ ++ G +D ++E++ +L G + + G KEG +E V L
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING-FCKEGLIDEAVML 413
Query: 322 ME 323
++
Sbjct: 414 LK 415
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 166/386 (43%), Gaps = 62/386 (16%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGV-VSDGVVYGSLMKGYFMK 60
G AD V Y+ ++ G R GD EEL +++ V + +V + + GY +
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGD-------VEELMDEMVRVDCAPNIVTFNTLIGYLCR 263
Query: 61 -GMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G+ E E + G ++M A +++D +C G + A ++ +RM P
Sbjct: 264 NGLFERVHEVLAQMSEHGCTPDIRMYA----TIIDGICKEGHLEVANEILNRM-----PS 314
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
L N+ +N + G C R+K+A E+ +M + C D ++FN L+D C+NG++
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 178 AEELYGEMSDKGVNPDEYTY----------GLL---------MDAC-------------- 204
EL +M G PD TY GL+ M +C
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 205 --FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKM 261
R D +M+ G PN +N L+ L + G++++A ++V
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
D SY ++ L GK +E LE++ ++ + GI + + + LS+EGR +V+++
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELL-NVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553
Query: 322 ME--KKEREKAEAKAREAEAAEAAKR 345
+ K +++A A + KR
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSLCKR 579
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G +PV ++ L+ + G + L +++ + G D + Y +++ G
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML--VNGCSPDLISYSTVIDGLGKA 509
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA+E N V N + + + +S+ AL G+ ++ +++FD +K+ +
Sbjct: 510 GKTEEALELLNVMV--NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD-----TTI 562
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +N + C + AI+ F M C P+ ++ LI L G+ EA+E
Sbjct: 563 RSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQE 622
Query: 181 LYGEMSDKG 189
L E+ +G
Sbjct: 623 LLSELCSRG 631
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 7/202 (3%)
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
PP N +F + G C +GR DA+EV +M C+P ++ +++ C++G
Sbjct: 108 PP-----NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGF 162
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+ + M KG D L+++A E VD+ RK+ G ++ YN +
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAV 222
Query: 236 VGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+ L + + D MV+ + ++ ++ L G + + E++ + + G
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282
Query: 295 IEFSEELQEFVKGELSKEGREE 316
+ G + KEG E
Sbjct: 283 TPDIRMYATIIDG-ICKEGHLE 303
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 148/317 (46%), Gaps = 13/317 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P +Y + LM GF + GD +F+E+ ++ G+ V + +L+ G G EE
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKR--GLRPTVVSFNTLISGCCKSGDVEEGF 303
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ V E+ V +++++ LC G+ DE LFD M + L N +F
Sbjct: 304 RL--KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCG-----RGLVPNGVTF 356
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ DG C G+ A++ F+ M PD +++N LI+ LCK G L EA L EM+
Sbjct: 357 TTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTA 416
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G+ PD+ T+ L+D C + ++ R+MV+ G+ + + L+ L + G + +
Sbjct: 417 SGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHD 476
Query: 248 A-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A + D++ K DD +Y ++ G + +++ + DG + +
Sbjct: 477 AGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMN 536
Query: 307 GELSKEGREEEVVKLME 323
G L K+G+ + L++
Sbjct: 537 G-LCKQGQMKNAKMLLD 552
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D +S L+ G ++G D LF+E+ + G+V +GV + +L+ G G +
Sbjct: 313 GVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR--GLVPNGVTFTTLIDGQCKGGKVD 370
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ + + + V+ V N++++ LC G EA +L + M P ++
Sbjct: 371 LALKNFQMMLAQG--VRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKI---- 424
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG C G + A+E+ R+M E D ++F LI LC+ G + +A + +
Sbjct: 425 -TFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTD 483
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G PD+ TY +++D + V G ++M G P + YN L+ L + G
Sbjct: 484 MLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQ 543
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
+ AK D M+ + +D +Y ++ S G
Sbjct: 544 MKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 134/314 (42%), Gaps = 42/314 (13%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
S G+V+ +L+ Y G +A++C+ V + N + + +
Sbjct: 174 SVGLVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSW 233
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
L+ + + PPK + FNV+ G+C G +A VF ++ + P +SFN
Sbjct: 234 ALYLEVLDSGYPPK-----IYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY-------- 216
LI CK+G + E L G M +GV PD +T+ L++ + R+D+G+
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348
Query: 217 ---------------------------FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
F+ M+ G+RP+L YN L+ L +VG L EA+
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGE 308
+ M LK D ++ ++ G ++ LEI ++++ GIE + +
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEE-GIELDDVAFTALISG 467
Query: 309 LSKEGREEEVVKLM 322
L +EGR + +++
Sbjct: 468 LCREGRVHDAGRML 481
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + ++ L+ G +DGD + + + E+ G+ D V + +L+ G +
Sbjct: 414 MTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEE--GIELDDVAFTALISGLCRE 471
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A + + ++ K V+D C G KL M+++ + P
Sbjct: 472 GRVHDAGRMLTDML--SAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVP--- 526
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++N + +G C QG+ K+A + M +P+ +++N L+D K+G + +
Sbjct: 527 --GVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDI 584
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
S+KG+ D +Y L++
Sbjct: 585 FN---SEKGLVTDYASYTALVN 603
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 121/253 (47%), Gaps = 10/253 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFR-LFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
GF+ + Y+ ++ +R S + +F+E+ E GV + Y L++G+ G
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVE--SGVSPNVYTYNILIRGFCTAGNL 219
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E + + E E + + V N+++DA C K EA KL M K L N
Sbjct: 220 EMGLFFFGEM--ERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLM-----ALKGLNPN 272
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L S+NV+ +G C +G+ K+ E+ +M + R PD ++FN LI+ C G +A L+
Sbjct: 273 LISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHA 332
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G++P+ TY L+++ + ++ + +M D GL PN Y L+ Q G
Sbjct: 333 EMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQG 392
Query: 244 MLDEAKSFFDIMV 256
L +A MV
Sbjct: 393 FLKQAYQIMKEMV 405
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 157/328 (47%), Gaps = 17/328 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG + + Y+ ++ G R+G + EE+ ++ V D V + +L+ GY
Sbjct: 264 MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKR--RYVPDRVTFNTLINGYCNV 321
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +A+ + E V + + + V ++++++C G + A++ D+M++ P
Sbjct: 322 GNFHQALVLHAEMV--KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHP--- 376
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++ + DG+ QG K A ++ ++M E +P +++N LI+ C G + +A
Sbjct: 377 --NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASG 434
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM ++G PD +Y ++ ++ +MV G+ P++A Y+ L+ L
Sbjct: 435 LLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLC 494
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ L E F M+ L D+ +Y ++ A G LD+ L + ++ G FS
Sbjct: 495 KQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG---FSP 551
Query: 300 ELQEF---VKGELSKEGREEEVVKLMEK 324
++ + + G +K+ R +E +L+ K
Sbjct: 552 DIVTYNVLING-FNKQSRTKEAKRLLLK 578
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 145/328 (44%), Gaps = 31/328 (9%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
P VY+Y L+ GF G+ + F E++ G + + V Y +++ Y
Sbjct: 199 VSPNVYTYNILIRGFCTAGNLEMGLFFFGEMER--NGCLPNVVTYNTIIDAY-------- 248
Query: 66 AMECYNEAVGEN---------SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
C +GE + + ++ N V++ LC G+ E ++ + M
Sbjct: 249 ---CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P R+ +FN + +GYC G F A+ + +M + SP+ +++ LI+ +CK G L
Sbjct: 306 PDRV-----TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
A E +M D+G++P+ TY L+D + + ++MV++G P + YN L+
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+G +++A M+++ D SY ++ +L++ ++ ++ G
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480
Query: 296 EFSEELQEFVKGELSKEGREEEVVKLME 323
++G L K+ R EV L +
Sbjct: 481 PDVATYSSLIQG-LCKQRRLGEVCDLFQ 507
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 142/314 (45%), Gaps = 25/314 (7%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF+ D V YS ++ GF R+ + + F+L E+ K G+ D Y SL++G +
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAK--GISPDVATYSSLIQGLCKQ 496
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E + + E + + + V S+++A C G D+AL+L D M + P
Sbjct: 497 RRLGEVCDLFQEML--SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP--- 551
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ------------ 168
++ ++NV+ +G+ Q R K+A + K+ P+ +++N LID
Sbjct: 552 --DIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALAL 609
Query: 169 ---LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
C G++ EA+ + M KG +E Y +++ +V ++ +++M+ SG
Sbjct: 610 MKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGF 669
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASY-KFMMKALSDGGKLDEILE 284
P+ L L G E D +K ++ +A+ K ++ S G +D +
Sbjct: 670 APHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFN 729
Query: 285 IVGGILDDGGIEFS 298
++ + G + +S
Sbjct: 730 VLKDMALSGLLPYS 743
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
Query: 126 SFNVMADGYCGQGRFKDAIEV----FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
S+N + D R K ++++ F++M E SP+ ++N LI C G L
Sbjct: 169 SYNAILDAVI---RTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFF 225
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+GEM G P+ TY ++DA ++ ++ + R M GL PNL YN ++ L +
Sbjct: 226 FGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCR 285
Query: 242 VGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
G + E + M K+ + D ++ ++ + G + L + ++ +G
Sbjct: 286 EGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338
>gi|302763707|ref|XP_002965275.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
gi|300167508|gb|EFJ34113.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
Length = 445
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 130/270 (48%), Gaps = 8/270 (2%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
GV + V Y ++ G G+ +EA E V E++ ++AV N V++ LC +GK D
Sbjct: 113 GVAPNRVTYNAMATGLGKAGLLDEAFELM--GVMESAGFALTAVTFNPVVEFLCKSGKPD 170
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EA K+ + M + P N+ + N++ +C R ++A+ + M E P ++
Sbjct: 171 EACKVMETMLLRNIEP-----NILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVT 225
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
FN L++ C + A EL M+ P+ TY +++ E+ R+ + + ++V
Sbjct: 226 FNALLELFCNTDQMDSAAELLETMARSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLV 285
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
G PNL V N V L + G +D A F +M ++ + + A+Y +++ G++D
Sbjct: 286 VCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMD 345
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELS 310
E ++ ++ +G + S ++G S
Sbjct: 346 EAERVLEEMIAEGSLPDSTTYSVLIQGLCS 375
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 8/221 (3%)
Query: 37 KEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCN 96
++ LG V YG+L+ G+ + G +EA E S V +N +L
Sbjct: 4 RKTLGEFVHSEFTYGTLVHGHCLAGEFDEAKRLVAEFKDTGMSPGSLVVLHNLMLKGFSE 63
Query: 97 NGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
DEA RM + N S+N + D C GR ++A E + M + +
Sbjct: 64 ARLVDEAKSHLHRMDCKPNSV--------SYNTLIDALCSSGRIQEAREELQAMAKRGVA 115
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P+ +++N + L K G+L EA EL G M G T+ +++ + + D+
Sbjct: 116 PNRVTYNAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKV 175
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
M+ + PN+ N ++ + +EA DIMV+
Sbjct: 176 METMLLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVE 216
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 9/179 (5%)
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT--YGLLMDACF 205
+ +GE+ S ++ L+ C G EA+ L E D G++P + L++
Sbjct: 5 KTLGEFVHS--EFTYGTLVHGHCLAGEFDEAKRLVAEFKDTGMSPGSLVVLHNLMLKGFS 62
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDA 264
E VD+ ++ +M +PN YN L+ L G + EA+ M K+ + +
Sbjct: 63 EARLVDEAKSHLHRM---DCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRV 119
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+Y M L G LDE E++ G+++ G + V L K G+ +E K+ME
Sbjct: 120 TYNAMATGLGKAGLLDEAFELM-GVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVME 177
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G A+ Y+ L+ GF + G D R+ EE+ + G + D Y L++G G
Sbjct: 322 EGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAE--GSLPDSTTYSVLIQGLCSAGQI 379
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH 114
A + S + +++ LC G+ D A + +RM +EH
Sbjct: 380 VHAFMVMLQVTRAVESARPDPATFVKLIEKLCELGEMDRAALVLERMGDEH 430
>gi|147832566|emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
Length = 457
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 145/320 (45%), Gaps = 11/320 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D V Y+ L+ + R D + + +KE G+ D + Y SL+ + +
Sbjct: 37 GLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKE--AGISPDVITYNSLIAAATKRCLLS 94
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+++ + E + + ++ + NS++ GK DEA ++F + + P
Sbjct: 95 RSLDLFEEML--RTGIRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSS----- 147
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN+M +G C G A+ ++R + P+ +++N LI+ LCK+ L A + E
Sbjct: 148 STFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRE 207
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ + G PD TY +M CF + + G F +M G + Y ++ L + G
Sbjct: 208 LGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGR 267
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L+EA + M + + +D SY +M GKL+ +++ I ++ G+E E
Sbjct: 268 LEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEI-EEHGLECDEYTHT 326
Query: 304 FVKGELSKEGREEEVVKLME 323
+ L K G E ++ ++
Sbjct: 327 ILIDGLCKAGNVEGALRHLK 346
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 47/271 (17%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GFV + V Y+ L+ G + + R+ EL E G V D + Y ++MK F
Sbjct: 176 QGFVPELVTYNILINGLCKSRKLNAARRILRELGE--SGNVPDAITYTTVMKCCF----- 228
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ +F++ ++F MK+ K A +
Sbjct: 229 --------------------------------RSRQFEQGFEIFSEMKS-----KGYAFD 251
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+ + GR ++A ++ +M D +S+N +++ C+NG L +L
Sbjct: 252 AFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLD 311
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G+ DEYT+ +L+D + V+ + + M G L N ++ L +VG
Sbjct: 312 EIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNCVIDGLCKVG 371
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALS 274
LD A F M K D +Y M+ L
Sbjct: 372 QLDHAIKMFASMEVK---DSFTYSSMVHNLC 399
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 2/175 (1%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C T N I LCK G L +AE + + G+ PD TY L+ A +D
Sbjct: 3 CRFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAY 62
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
+ +M ++G+ P++ YN L+ + +L + F+ M++ ++ D SY +M
Sbjct: 63 SVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCF 122
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
GK DE + I+ + S + G L G + L +R+
Sbjct: 123 FKLGKPDEANRVFQDIILTNLLPSSSTFNIMING-LCNNGYTGYALSLYRYLQRQ 176
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 155/321 (48%), Gaps = 12/321 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + + L+ R G+++ + + + L L G+ D +L+ G K E M
Sbjct: 116 DTIALTQLISKLCRSGNTNLAWNILDNLM-MLNGL-KDAAPCNALLTG-LGKAREFGKMN 172
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR-LAVNLGSF 127
+ ++ +++ + + +++ LC + D+AL++F++MK E K +A + +
Sbjct: 173 LLMRKM-KDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMY 231
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + DG C GR ++A+ + KM +C+P T +FN LI+ C++G + A +L+ EM +
Sbjct: 232 NTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMEN 291
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+ P+ T L+D + NR+ +FR M GL+ N Y + V +++
Sbjct: 292 AQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNK 351
Query: 248 AKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEELQ 302
A F D M K DA Y ++ L+ G+LD+ +V + + G + ++ +
Sbjct: 352 AMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLIS 411
Query: 303 EFVKGELSKEGREEEVVKLME 323
EF K +K R +E + ME
Sbjct: 412 EFCKK--NKLDRAQEWLNEME 430
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 108/249 (43%), Gaps = 10/249 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D VVY L+ G + G D + +LKE G D V Y L+ + K +
Sbjct: 363 GCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKE--AGFCLDRVCYNVLISEFCKKNKLD 420
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A E NE E + VK +V N+++ G F A K +M E L+ +
Sbjct: 421 RAQEWLNEM--ELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEG----LSPTV 474
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEY--RCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++ + YC +AI++F++M + P+T+ +N LID LCK + A L
Sbjct: 475 FTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLL 534
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
+M +GV P+ TY + A + N +D +MV+ P+ L L V
Sbjct: 535 DDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAV 594
Query: 243 GMLDEAKSF 251
G + + K F
Sbjct: 595 GEITKLKKF 603
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 130/286 (45%), Gaps = 12/286 (4%)
Query: 3 VKGFVA-DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
K FVA D ++Y+ L+ G + G + L +++ + + L+ GY G
Sbjct: 220 TKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTT--ATFNCLINGYCRSG 277
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E A + +NE EN+ ++ + + N+++D +C + + A++ F M+ K L
Sbjct: 278 EIEVAHKLFNEM--ENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQ-----KGLK 330
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N ++ V + +C A+E +M + C PD + + LI L + G L +A +
Sbjct: 331 GNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSV 390
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
++ + G D Y +L+ + N++D + +M +G++P+ YN L+ +
Sbjct: 391 VSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSK 450
Query: 242 VGMLDEAKSFFDIMVKK--LKMDDASYKFMMKALSDGGKLDEILEI 285
+G A F M ++ L +Y ++ A +DE ++I
Sbjct: 451 IGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKI 496
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 126/292 (43%), Gaps = 13/292 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + V Y+ + F + + +E+ + G D VVY +L+ G G
Sbjct: 327 KGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKD--GCFPDAVVYYTLICGLAQAGRL 384
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A ++ + + + V N ++ C K D A + + M+ P +
Sbjct: 385 DDASSVVSKL--KEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSV--- 439
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYR-CSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++N + + G FK A + +KM E SP ++ LI C N + EA +++
Sbjct: 440 --TYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIF 497
Query: 183 GEMSD--KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
EM++ V P+ Y +L+D+ + +V+ + M G+ PN YN + L
Sbjct: 498 KEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALR 557
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
LD+A D MV++ D + + + + LS G++ ++ + G ++
Sbjct: 558 DKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITKLKKFTQGCMN 609
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 103/234 (44%), Gaps = 52/234 (22%)
Query: 61 GMEEEAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM---KNEHN 115
GM +EA+ ++ ++ +N++V+ N +++ L +G+ D A+ + D M ++E
Sbjct: 20 GMVDEALAAFSTLDSHAKNTNVR------NEIINLLLKSGRVDNAMNVLDEMLLPESEFR 73
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM- 174
P + A + + + DG G+ + + + K G++ PDT++ LI +LC++G
Sbjct: 74 PNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNT 133
Query: 175 ----------------------------LAEAEE------LYGEMSDKGVNPDEYTYGLL 200
L +A E L +M D + P T+G+L
Sbjct: 134 NLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGIL 193
Query: 201 MDACFEVNRVDDGATYFRKM------VDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
++ + R+DD F KM + P+ +YN L+ L +VG +EA
Sbjct: 194 INHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEA 247
>gi|225454807|ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Vitis vinifera]
Length = 457
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 145/320 (45%), Gaps = 11/320 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D V Y+ L+ + R D + + +KE G+ D + Y SL+ + +
Sbjct: 37 GLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKE--AGISPDVITYNSLIAAATKRCLLS 94
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+++ + E + + ++ + NS++ GK DEA ++F + + P
Sbjct: 95 RSLDLFEEML--RTGIRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSS----- 147
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN+M +G C G A+ ++R + P+ +++N LI+ LCK+ L A + E
Sbjct: 148 STFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILRE 207
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ + G PD TY +M CF + + G F +M G + Y ++ L + G
Sbjct: 208 LGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGR 267
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L+EA + M + + +D SY +M GKL+ +++ I ++ G+E E
Sbjct: 268 LEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEI-EEHGLECDEYTHT 326
Query: 304 FVKGELSKEGREEEVVKLME 323
+ L K G E ++ ++
Sbjct: 327 ILIDGLCKAGNVEGALRHLK 346
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 126/321 (39%), Gaps = 48/321 (14%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GFV + V Y+ L+ G + + R+ EL E G V D + Y ++MK F
Sbjct: 176 QGFVPELVTYNILINGLCKSRKLNAARRILRELGE--SGNVPDAITYTTVMKCCF----- 228
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ +F++ ++F MK+ K A +
Sbjct: 229 --------------------------------RSRQFEQGFEIFSEMKS-----KGYAFD 251
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+ + GR ++A ++ +M D +S+N +++ C+NG L +L
Sbjct: 252 AFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLD 311
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E+ + G+ DEYT+ +L+D + V+ + + M G L N ++ L +VG
Sbjct: 312 EIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNCVIDGLCKVG 371
Query: 244 MLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
LD A F M K D +Y M+ L + ++ L GG++ Q
Sbjct: 372 QLDHAIKMFASMEVK---DSFTYSSMVHNLCKARRYRHASRLLLACL-RGGMKILRANQR 427
Query: 304 FVKGELSKEGREEEVVKLMEK 324
V L G E +L K
Sbjct: 428 SVIDGLCYSGYTSEARRLKSK 448
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 2/175 (1%)
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
C T N I LCK G L +AE + + G+ PD TY L+ A +D
Sbjct: 3 CRFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAY 62
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
+ +M ++G+ P++ YN L+ + +L + F+ M++ ++ D SY +M
Sbjct: 63 SVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCF 122
Query: 274 SDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
GK DE + I+ + S + G L G + L +R+
Sbjct: 123 FKLGKPDEANRVFQDIILTNLLPSSSTFNIMING-LCNNGYTGYALSLYRYLQRQ 176
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 140/293 (47%), Gaps = 10/293 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V ++ LM GF + RL + +K L G+ + V Y +LM Y +G
Sbjct: 555 KGISPTIVTFNSLMYGFCINRKLSQARRLLDTIK--LHGLEPNAVTYTTLMNVYCEEGNM 612
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+ +E +E + ++ + + V+ LC K E+ +L + M P ++
Sbjct: 613 QSLLELLSEM--KAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQV--- 667
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N + +C + A +++ KM + P ++++N LI+ C G L +A+ L
Sbjct: 668 --SYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLV 725
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+ ++ VN ++Y Y ++ A VD YFR+MV+ G ++ Y+ ++G+L +
Sbjct: 726 SLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRC 785
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
++ EAK FF +M+ + D ++ ++ A G L+ E++ ++ G +
Sbjct: 786 LVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 128/275 (46%), Gaps = 10/275 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GF + + L+ + D F+LF E++ G+ D + Y +L+ G +
Sbjct: 412 MISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEA--NGLRPDLITYSTLIHGLCKQ 469
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+ Y E + N + S + + ++L LC GK +A FD + + L
Sbjct: 470 GEVQQAILLY-EKMCSNRIIPNSLI-HGAILMGLCEKGKISQARMYFDYLITSN-----L 522
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++++ +N+M DGY +G ++A+++++++GE SP ++FN+L+ C N L++A
Sbjct: 523 SLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARR 582
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L + G+ P+ TY LM+ E + +M + P Y ++ L
Sbjct: 583 LLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLC 642
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALS 274
+ L E+ D+ L D SY +++A
Sbjct: 643 KQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFC 677
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 9/256 (3%)
Query: 70 YNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNV 129
YNE + S S ++ V+D LC +F +A+ F + + P ++ SFN
Sbjct: 234 YNEI--KVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQP-----SVVSFNT 286
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ YC G A F M ++ PD S+N LI LC G + EA +L +M + G
Sbjct: 287 IMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHG 346
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ PD TY +L + ++ +KM+ G PNL Y L+ Q+G ++EA
Sbjct: 347 LEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEAL 406
Query: 250 SFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGE 308
+ M+ ++ S ++ +L ++D ++ + +G + G
Sbjct: 407 KLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHG- 465
Query: 309 LSKEGREEEVVKLMEK 324
L K+G ++ + L EK
Sbjct: 466 LCKQGEVQQAILLYEK 481
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 129/286 (45%), Gaps = 13/286 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G++ D Y L+ G + G EA++ N+ EN ++ V N + G +
Sbjct: 311 GLLPDAYSYNILIHGLCIAGSMGEALDLKNDM--ENHGLEPDMVTYNILAKGFRLLGLIN 368
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
A + +M + P NL ++ V+ G+C G ++A++++++M + +S
Sbjct: 369 GAWNIIQKMLIKGPNP-----NLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIIS 423
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
L+ LCK+ + A +L+ EM G+ PD TY L+ + V + KM
Sbjct: 424 STVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMC 483
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
+ + PN ++ ++ L + G + +A+ +FD ++ L +D Y M+ G
Sbjct: 484 SNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTR 543
Query: 281 EILEIVGGILDDG----GIEFSEELQEF-VKGELSKEGREEEVVKL 321
E +++ + + G + F+ + F + +LS+ R + +KL
Sbjct: 544 EAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKL 589
>gi|413944087|gb|AFW76736.1| hypothetical protein ZEAMMB73_938811 [Zea mays]
Length = 496
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 6/239 (2%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS-VKMSAVANNSVLDALCNNGKFDEA 103
+ VY L+K Y G E A + +E + VK + V ++++ LC GK EA
Sbjct: 180 PNTCVYNILVKHYVKNGELETAFKVLDEMREYTCADVKPNLVTYSTLIGGLCRGGKMKEA 239
Query: 104 LKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFN 163
+LF+ M + R+ + +NV+ DG+C QG+ A +F M + C P+T ++
Sbjct: 240 FELFEEMIEK----DRIVPDQLLYNVIIDGFCRQGQVDKARAIFGFMRKNECEPNTFNYA 295
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
LI+ CK + A ++ EM + GV PD +Y L+ VD+G +M +
Sbjct: 296 TLINGHCKKADIEAARSVFEEMRNSGVEPDAVSYTALIGCLCRHGSVDEGIGLVLEMKEK 355
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDE 281
G R ++ YN ++ L + G EA + + ++ +K++ ASY+ +M L G++D
Sbjct: 356 GCRADVVTYNLVIEGLCKDGRTVEAMGLLESVPLEGVKLNVASYRILMNCLCSRGEMDR 414
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 8/238 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V YS L+ G R G F LFEE+ EK +V D ++Y ++ G+ +G ++A +
Sbjct: 221 VTYSTLIGGLCRGGKMKEAFELFEEMIEK-DRIVPDQLLYNVIIDGFCRQGQVDKARAIF 279
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + ++++ C + A +F+ M+N P + S+ +
Sbjct: 280 --GFMRKNECEPNTFNYATLINGHCKKADIEAARSVFEEMRNSGVEPDAV-----SYTAL 332
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
C G + I + +M E C D +++N +I+ LCK+G EA L + +GV
Sbjct: 333 IGCLCRHGSVDEGIGLVLEMKEKGCRADVVTYNLVIEGLCKDGRTVEAMGLLESVPLEGV 392
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+ +Y +LM+ +D M+ G P+ A N L+ L G + +A
Sbjct: 393 KLNVASYRILMNCLCSRGEMDRAVGLLGLMLGRGFLPHYAASNNLLIGLCDAGRIADA 450
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 41/212 (19%)
Query: 152 EYRCSPDTLSFNNLIDQ--------------------------------------LCKNG 173
+Y P+T +N L+ LC+ G
Sbjct: 175 KYLPRPNTCVYNILVKHYVKNGELETAFKVLDEMREYTCADVKPNLVTYSTLIGGLCRGG 234
Query: 174 MLAEAEELYGEMSDKG-VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
+ EA EL+ EM +K + PD+ Y +++D +VD F M + PN Y
Sbjct: 235 KMKEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRQGQVDKARAIFGFMRKNECEPNTFNY 294
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
L+ + ++ A+S F+ M ++ D SY ++ L G +DE + +V + +
Sbjct: 295 ATLINGHCKKADIEAARSVFEEMRNSGVEPDAVSYTALIGCLCRHGSVDEGIGLVLEMKE 354
Query: 292 DGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
G ++G L K+GR E + L+E
Sbjct: 355 KGCRADVVTYNLVIEG-LCKDGRTVEAMGLLE 385
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 5/235 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+ L+AL G+ D A ++FD M+ N +A+N S+ M C G+ E+
Sbjct: 189 NAFLEALVRAGQLDAAREVFDEMRESRN----VALNEYSYTAMIKALCKAGKVDAGFEML 244
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
++ P +++N L+D LCK+G + EA L G M G+ P T+G+L++
Sbjct: 245 AELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARG 304
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASY 266
R + ++M G+ PN +YN L+G + G +A FD MV KK+K +Y
Sbjct: 305 ERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTY 364
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
+ KAL G+++ I+ +L G V L + R E VV +
Sbjct: 365 NLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSI 419
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 114/247 (46%), Gaps = 15/247 (6%)
Query: 70 YNEAVG-----ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ EAVG N + ++ +N+++ LC EA K+ M N K + ++
Sbjct: 448 HQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLN-----KGIELDS 502
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N+M G C + ++AI++ M PD +FN L+ C G + E L +
Sbjct: 503 ITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQ 562
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +G+ PD +YG ++D + + Y +++D GL+PN+ +YN L+G + G
Sbjct: 563 MKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGD 622
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI----LDDGGIEFSE 299
+ A + M ++ + +Y +M + G ++E I +D G I ++
Sbjct: 623 ISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTI 682
Query: 300 ELQEFVK 306
+Q + K
Sbjct: 683 MIQGYCK 689
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 142/312 (45%), Gaps = 16/312 (5%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
VR G D +F+E++E V + Y +++K G + E E +
Sbjct: 195 LVRAGQLDAAREVFDEMRES-RNVALNEYSYTAMIKALCKAGKVDAGFEMLAEL--WRAG 251
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
++ + V N ++DALC +G+ +EA +L RM+ P ++ +F ++ +G R
Sbjct: 252 LQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTP-----SVVTFGILINGLARGER 306
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
F + V ++M + SP+ + +N LI C+ G ++A L+ EM K + P TY L
Sbjct: 307 FGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNL 366
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ-VGMLDEAKSFFDIMVKK 258
+ A + ++ M+ G+ + ++N +V L+Q L+ S + MV +
Sbjct: 367 IAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTR 426
Query: 259 -LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG-GIEFSEE---LQEFVKGELSKEG 313
++ +D M+ L GGK E + I L+ G G+ + + +G+ KE
Sbjct: 427 GMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEA 486
Query: 314 REEEVVKLMEKK 325
+V++ M K
Sbjct: 487 --TKVIQTMLNK 496
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 124/270 (45%), Gaps = 44/270 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY--- 57
M +GF D ++ L+ + G + F L +++K + G+ D V YG+++ G+
Sbjct: 528 MTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTE--GLQPDIVSYGTIIDGHCKA 585
Query: 58 --------FMKGMEEEAME----CYNEAVG------------------ENSSVKMSAVAN 87
++ + + ++ YN +G +++ ++ + V
Sbjct: 586 KDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTY 645
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG--SFNVMADGYCGQGRFKDAIE 145
S++ +C+ G +EA +F + + E+N V+LG + +M GYC G+ +A+
Sbjct: 646 GSLMYWMCHAGLVEEAKTIFSQAR-ENN------VDLGVIGYTIMIQGYCKLGKMVEAVA 698
Query: 146 VFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
F +M SP+ L++ L+ K+G EA +L+ EM GV PD TYG L+ C
Sbjct: 699 YFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCS 758
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
EVN +D + ++ L + +YN L
Sbjct: 759 EVNSLDKDIGHTAELSSGALTKDDRMYNIL 788
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 124/299 (41%), Gaps = 46/299 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V + L+ G R G+ G + + E+LG V + V+Y L+ + KG
Sbjct: 286 GMTPSVVTFGILINGLAR-GERFGEVGIVLQEMEQLG-VSPNEVIYNELIGWHCRKGHCS 343
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ ++E V + +K +AV N + ALC G+ + A ++ + M + + V+
Sbjct: 344 QALRLFDEMVLKK--MKPTAVTYNLIAKALCKEGEMERAERILEDMLS-----IGMTVHC 396
Query: 125 GSFNVMADGY------------------------------------CGQGRFKDAIEVFR 148
G FN + C G+ ++A+ ++
Sbjct: 397 GLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWF 456
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
K + + N LI LC+ + EA ++ M +KG+ D TY +++ C + +
Sbjct: 457 KTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDS 516
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASY 266
++++ M G +P+L +N L+ +G ++E D M + L+ D SY
Sbjct: 517 KMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSY 575
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 94/200 (47%), Gaps = 3/200 (1%)
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD-KGVNPDEY 195
QG A + FR + P + N ++ L + G L A E++ EM + + V +EY
Sbjct: 163 QGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEY 222
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+Y ++ A + +VD G ++ +GL+P + YN L+ L + G ++EA M
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 282
Query: 256 VK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
+ + ++ ++ L+ G + E+ IV ++ G+ +E + + G ++G
Sbjct: 283 EQGGMTPSVVTFGILINGLARGERFGEV-GIVLQEMEQLGVSPNEVIYNELIGWHCRKGH 341
Query: 315 EEEVVKLMEKKEREKAEAKA 334
+ ++L ++ +K + A
Sbjct: 342 CSQALRLFDEMVLKKMKPTA 361
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + + V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A LFD M + K L N
Sbjct: 189 EGFRLKNAM--QVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLD-----KGLVPNG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M SPD +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKG 395
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V G D YS L+ G ++ D LF+E+ +K G+V +GV + +L+ G+
Sbjct: 197 MQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDK--GLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDL--ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM + G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 98/252 (38%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +LM + + + + F + LRP++ +N L+ +++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE + M V ++ D +Y ++ L K+D+ + +LD G +
Sbjct: 186 DLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 163/354 (46%), Gaps = 42/354 (11%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRL-------------------FEELKEK------ 39
G AD V Y L+ GF R + + R+ +EL++K
Sbjct: 286 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 345
Query: 40 ------LG--GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
LG G+V + Y +L+ ++A + E G ++ + V ++
Sbjct: 346 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGR--GLEPNEVTYAILI 403
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
ALC G ++AL LFD+M++ K + V + +N + +GYC QG A + M
Sbjct: 404 HALCKRGMIEDALCLFDKMRD-----KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV 458
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ +P S++ LI LC+NG L+ EL+ EM+++G+ + YT+ L++ + ++D
Sbjct: 459 KEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMD 518
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ A F KM+DS + PN +N ++ VG + +A +D MV+ LK D+ +Y+ ++
Sbjct: 519 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 578
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
L + + E V + + + + L + G +EGR E L ++
Sbjct: 579 SGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYG-FFREGRFTETYHLWDE 631
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G D V ++ ++ ++ D + LF E+KE+ GV D + Y ++ +
Sbjct: 632 MAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ--GVKPDDIFYTCMIDALSKE 689
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A+ C+++ V + S + V + +++ LC +G A L M + P +
Sbjct: 690 ENMIQALNCWDQMVVDGYSP--NTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 747
Query: 121 AVN-----------------------------LGSFNVMADGYCGQGRFKDAIEVFRKMG 151
N + SFN++ G C G+ ++AI++ K+
Sbjct: 748 TYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKIT 807
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
E SPD +S++ +I +LCK G + +A EL+ EM KG+ PD Y + + C D
Sbjct: 808 ESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESD 867
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLV 236
+ M+ SG++PN Y L+
Sbjct: 868 KALGIYTNMIRSGVQPNWDTYRALL 892
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 144/325 (44%), Gaps = 11/325 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D VY+ + + + DG L ++ + GV + V Y LM G
Sbjct: 212 MLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE--GVKASAVPYNVLMYGLCKN 269
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA+E N V N V V +++ C + + AL++ M P
Sbjct: 270 MRVQEAVEVKNVMV--NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSE- 326
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ + M D + ++A + K+G+ P+ ++N LID+LCKN +A+
Sbjct: 327 ----ANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 382
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM+ +G+ P+E TY +L+ A + ++D F KM D G++ + YN L+
Sbjct: 383 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 442
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G LD A+ MVK+ L ASY ++ L G L +E+ + + G +
Sbjct: 443 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 502
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+ G K+ + +E +L +K
Sbjct: 503 TFTALING-FCKDKKMDEAARLFDK 526
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 142/312 (45%), Gaps = 18/312 (5%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+ + V ++ ++ G+ G+ F+L++++ E G+ D Y SL+ G + +A
Sbjct: 533 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM--GLKPDNYTYRSLISGLCLTSGVSKA 590
Query: 67 MECYNEAVG--ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
NE V ENS ++ + ++L G+F E L+D M + + ++L
Sbjct: 591 ----NEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA-----VRGVKLDL 641
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
SF ++ Q + + +FR+M E PD + + +ID L K + +A + +
Sbjct: 642 VSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ 701
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G +P+ T+ +L++ + + ++M+ + PN YN + G
Sbjct: 702 MVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGD 761
Query: 245 LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEE 300
+++AK M++ S+ ++K L GK+ E ++++ I + G I +S
Sbjct: 762 MEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTI 821
Query: 301 LQEFVK-GELSK 311
+ E K G+++K
Sbjct: 822 IHELCKMGDINK 833
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 2/163 (1%)
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
+ ++ L K A A +L+ +M GV+ DEY Y + A E +D +M
Sbjct: 190 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 249
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
G++ + YN L+ L + + EA ++MV + D+ +Y+ ++ +L+
Sbjct: 250 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 309
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
L I ++ G + SE F+ EL K+ EE L K
Sbjct: 310 ALRITHDMIRLGFVP-SEANCSFMIDELRKKELVEEAFSLACK 351
>gi|326525168|dbj|BAK07854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 500
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 153/334 (45%), Gaps = 23/334 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDS--DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF 58
M GF Y+ L+ D + D RLF + + D Y +L+ G
Sbjct: 176 MRASGFGPTTATYNVLLKAHCSDAAAHIDDAVRLFRNIPKP------DACSYNTLIDGLC 229
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ EA E ++E V EN + + V ++++ L G D+AL++FD M +
Sbjct: 230 RRSRRVEAQELFSEMV-ENG-IAPTVVTYTTIINWLAREGCLDDALEMFDEMGR-----R 282
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+A N+ +++ + DG C GR A+++ ++ + P+T+ ++++I+ LCK G+L EA
Sbjct: 283 GIAPNVVTYSSLIDGLCKGGRAASALDLLERLAKEVKLPNTIIYSSVINGLCKEGLLREA 342
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN----- 233
E+ M +G PD +G L+ + R + A Y +MV +G++PN ++
Sbjct: 343 MEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGVQPNRVTWSLHVRI 402
Query: 234 --RLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
+V L G + A + M + + + +++ +++ S L++ +V +L
Sbjct: 403 NVAVVTALCVKGEVGRAFQVYQSMRTRGISTEPSTFHLLVEFFSKKNHLEKAAHVVLDML 462
Query: 291 DDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ I E V G SK+ +E ++ K
Sbjct: 463 SERCIPERETWDVIVSGYWSKKKVRQEAEQIWNK 496
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 135/284 (47%), Gaps = 35/284 (12%)
Query: 5 GFVADPVVYSYLMLG-FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G + V ++ L+ G F + +D V + ++EK+ + V+YG++M G +G
Sbjct: 127 GIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICE--PNEVMYGTVMNGLSKRGHT 184
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK----- 118
E+ + + E + K + V+DALC + D A+ L + MK ++ PP
Sbjct: 185 EKTLSLLR--IMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYN 242
Query: 119 -------------------------RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
+ N+ +F+++ DG C +G+ +DA EV R M E
Sbjct: 243 SLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEK 302
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
PD ++++ ++D C G + A ++ + DKG+ P+ ++Y +L++ + +
Sbjct: 303 GVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKA 362
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
F ++ GL+P+ Y+ ++ L++VG + +AK FD M++
Sbjct: 363 MQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLR 406
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 149/320 (46%), Gaps = 11/320 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D YS ++ +D + D L E+K+K + + Y SL+ G G E+
Sbjct: 201 PDVRTYSIVIDALCKDINLDAAINLLNEMKQK--NIPPNIFTYNSLIDGLCKLGQWEKVK 258
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+E V N + + + ++D LC GK ++A ++ M + P ++ ++
Sbjct: 259 TLLSEMVNLNINPNVHTFS--ILIDGLCKEGKVEDADEVMRHMIEKGVEP-----DIITY 311
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ + DGYC +G+ A VF + + P+ S++ LI+ CK LA+A +L+GE+S
Sbjct: 312 SAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQ 371
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
KG+ PD TY ++ EV R+ D F +M+ G P++ +++ L+ + G+++E
Sbjct: 372 KGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEE 431
Query: 248 AKSFFDIMVKKLKMDDAS-YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A F + + + + S Y ++ L ++ E I + G I +
Sbjct: 432 AMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMIT 491
Query: 307 GELSKEGREEEVVKLMEKKE 326
G +EG +EV ++ K E
Sbjct: 492 G-FCREGLFDEVKGILRKME 510
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 34/255 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D + YS +M G+ G D R+F L++K G+ + Y L+ GY K
Sbjct: 299 MIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDK--GIKPNIFSYSILINGYCKK 356
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
+AM+ + E +K V +++L L G+ +A K+FD M P
Sbjct: 357 KNLAKAMQLFGEI--SQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDIC 414
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
R N+ + V+ +G C R ++A +F K+
Sbjct: 415 LHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKL 474
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
PD ++N +I C+ G+ E + + +M D G + TY ++M F N++
Sbjct: 475 PSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKI 534
Query: 211 DDGATYFRKMVDSGL 225
+ ++ ++M G
Sbjct: 535 SEIVSFMKEMAGRGF 549
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V YS ++ G + G ++F+E+ G D ++ +L+ GYF G+
Sbjct: 372 KGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRV--GPTPDICLHSTLLFGYFKYGLV 429
Query: 64 EEAMECYN--EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
EEAM ++ E E++++ V V++ LC N + EA +F+++ P L
Sbjct: 430 EEAMLLFSKLERNREDTNISFYTV----VINGLCKNDRVREAHAIFEKL-----PSIGLI 480
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
++ ++NVM G+C +G F + + RKM + C + +++N ++ ++ ++E
Sbjct: 481 PDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSF 540
Query: 182 YGEMSDKGVNPDEYTYGLLMDA 203
EM+ +G + D T G+L++
Sbjct: 541 MKEMAGRGFSFDATTTGVLINV 562
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 144/326 (44%), Gaps = 30/326 (9%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
+S L + V LF E++ LG +SD ++ + Y ++ + A
Sbjct: 65 FSKLFKTMINMKHYSAVVSLFREMR-ILGIPISDSIL-NIVTNSYCLRHRIDCAFSVL-- 120
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ + + + V N++L L K +A+ LF ++ E K N + + +
Sbjct: 121 PIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVRE----KICEPNEVMYGTVMN 176
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G +G + + + R M + PD +++ +ID LCK+ L A L EM K + P
Sbjct: 177 GLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPP 236
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+ +TY L+D ++ + + T +MV+ + PN+ ++ L+ L + G +++A
Sbjct: 237 NIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVM 296
Query: 253 DIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE--------------- 296
M++K ++ D +Y +M G++D V +L D GI+
Sbjct: 297 RHMIEKGVEPDIITYSAIMDGYCLRGQVDRARR-VFNVLRDKGIKPNIFSYSILINGYCK 355
Query: 297 ---FSEELQEFVKGELSKEGREEEVV 319
++ +Q F GE+S++G + + V
Sbjct: 356 KKNLAKAMQLF--GEISQKGLKPDTV 379
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 81/189 (42%), Gaps = 3/189 (1%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA+ +F +M + P + F+ L + + L+ EM G+ + ++
Sbjct: 45 DAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVT 104
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV--KKL 259
++ +R+D + + +G+ N+ +N L+G L + +A F +V K
Sbjct: 105 NSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKIC 164
Query: 260 KMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVV 319
+ ++ Y +M LS G ++ L ++ I++ G + V L K+ + +
Sbjct: 165 EPNEVMYGTVMNGLSKRGHTEKTLSLL-RIMEQGNTKPDVRTYSIVIDALCKDINLDAAI 223
Query: 320 KLMEKKERE 328
L+ + +++
Sbjct: 224 NLLNEMKQK 232
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 142/317 (44%), Gaps = 15/317 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G A+ V L+ G ++G+ +G LF+++ E+ G++ D V Y +LM G F
Sbjct: 493 MLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDER--GLLLDHVNYTTLMDGLFKT 550
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A + E + +N S AV N ++ LC GKF EA M+N P +
Sbjct: 551 GNMPAAFKVGQELMEKNLSP--DAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQ- 607
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N M C +G+ A+++ ++M P+ +++ L+ L + G++ +A+
Sbjct: 608 ----ATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKF 663
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM+ G P T+ ++ AC R D M+ +GL ++ VYN LV L
Sbjct: 664 LLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLC 723
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
GM A D M+ + + D ++ ++ LD I +L G S
Sbjct: 724 CHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQG---LSP 780
Query: 300 ELQEF--VKGELSKEGR 314
+ F + G L GR
Sbjct: 781 NIATFNTLLGGLESAGR 797
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 133/286 (46%), Gaps = 10/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + D V S L+ G RDG + LF E+ + GV + V Y +L+
Sbjct: 283 MVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKI--GVAPNHVTYCTLIDSLAKA 340
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E++ E V V M V +++D L GK +EA + ++++ P
Sbjct: 341 RRGSESLGLLGEMVSRG--VVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITP--- 395
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++ V+ D +C G A +V +M E P+ ++F+++I+ L K G L +A +
Sbjct: 396 --NFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAAD 453
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+M D G+ P+ TYG L+D F+ + +R M+ G+ N V + LV L
Sbjct: 454 YMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLR 513
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
+ G ++ A++ F D+ + L +D +Y +M L G + ++
Sbjct: 514 KNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKV 559
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 136/287 (47%), Gaps = 18/287 (6%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K + + V +S ++ G V+ G ++K+ G+ + V YG+L+ G+F +
Sbjct: 426 KSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDS--GIAPNVVTYGTLIDGFFKFQGQ 483
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCN----NGKFDEALKLFDRMKNEHNPPKR 119
E A++ Y + + E ANN V+D+L N NG + A LF M +
Sbjct: 484 EAALDVYRDMLHEGVE------ANNFVVDSLVNGLRKNGNIEGAEALFKDMDE-----RG 532
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
L ++ ++ + DG G A +V +++ E SPD + +N I+ LC G +EA+
Sbjct: 533 LLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAK 592
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EM + G+ PD+ TY ++ A + ++M + ++PNL Y LV L
Sbjct: 593 SFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGL 652
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
++ G++ +AK + M +++ +++A S + D ILEI
Sbjct: 653 LEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEI 699
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 144/352 (40%), Gaps = 49/352 (13%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + D V Y+ LM G + G+ F++ +EL EK + D VVY + G
Sbjct: 531 RGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEK--NLSPDAVVYNVFINCLCTLGKF 588
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E N+ ++ N+++ A C GK +ALKL MK P N
Sbjct: 589 SEAKSFLKEM--RNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKP-----N 641
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS---------------------- 161
L ++ + G G K A + +M +P +L+
Sbjct: 642 LITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHE 701
Query: 162 -------------FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+N L+ LC +GM A + EM +G+ PD T+ L+ + +
Sbjct: 702 LMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSS 761
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYK 267
+D+ + +M+ GL PN+A +N L+G L G + EA + M K L+ ++ +Y
Sbjct: 762 HLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYD 821
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIE----FSEELQEFVKGELSKEGRE 315
++ + E L + ++ G I ++ + +F K + + +E
Sbjct: 822 ILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKE 873
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 8/281 (2%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V S ++G R G L E L G D V + +L+ GY
Sbjct: 141 MCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGYCKV 200
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
A+ + V + V NS++ ++G D AL++ +RMK + P
Sbjct: 201 QDMAAALAVVERMTTQG--VALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEP--- 255
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + YC +A ++ M PD ++ + L+D LC++G +EA
Sbjct: 256 --NVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYA 313
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM GV P+ TY L+D+ + R + +MV G+ +L +Y L+ +L
Sbjct: 314 LFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLG 373
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLD 280
+ G ++EAK + + +Y ++ A G +D
Sbjct: 374 KEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNID 414
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 122/304 (40%), Gaps = 41/304 (13%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D Y+ ++ R+G + +L +E+K + + + Y +L+ G G+ +
Sbjct: 602 GLEPDQATYNTMIAARCREGKTSKALKLLKEMKRN--SIKPNLITYTTLVVGLLEAGVVK 659
Query: 65 EAMECYNE---------------------------AVGENSSVKMSA------VANNSVL 91
+A NE + E + M A N+++
Sbjct: 660 KAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLV 719
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
LC +G A + D M P + +FN + G+C +A ++ +M
Sbjct: 720 HVLCCHGMARNATVVLDEMLTRGIAPDTI-----TFNALILGHCKSSHLDNAFAIYAQML 774
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
SP+ +FN L+ L G + EA+ + +M G+ P+ TY +L+ + +
Sbjct: 775 HQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKV 834
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS-YKFMM 270
+ + +MV G P + YN L+ + GM+++AK F M ++ + +S Y ++
Sbjct: 835 EALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILL 894
Query: 271 KALS 274
S
Sbjct: 895 NGWS 898
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 113/275 (41%), Gaps = 8/275 (2%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
AD V Y+ + G + E+ ++ GV DGV + + G G+ EA
Sbjct: 113 ADTVSYNIFLAALSEQGHGRLAPPVLSEMCKR--GVSWDGVTVSTALVGLCRTGLVGEAA 170
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
V + V N+++D C AL + +RM + +A+++ +
Sbjct: 171 ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQG-----VALDVVGY 225
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + G+ G A+EV +M P+ +++ LI + CK + EA LY M
Sbjct: 226 NSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVR 285
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
GV PD T L+D + + FR+M G+ PN Y L+ L + E
Sbjct: 286 SGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSE 345
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ MV + + MD Y +M L GK++E
Sbjct: 346 SLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEE 380
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 113/257 (43%), Gaps = 9/257 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G AD VY+ L+ G + + +E+ + G+ D + + +L+ G+
Sbjct: 703 MMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTR--GIAPDTITFNALILGHCKS 760
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ A Y + + + S ++ N++L L + G+ EA + MK P L
Sbjct: 761 SHLDNAFAIYAQMLHQGLSPNIATF--NTLLGGLESAGRIGEADTVLSDMKKVGLEPNNL 818
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++++ GY + +A+ ++ +M P ++N+L+ K GM+ +A+E
Sbjct: 819 -----TYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKE 873
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM +GV TY +L++ ++ + + M + G +P+ + +
Sbjct: 874 LFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFS 933
Query: 241 QVGMLDEAKSFFDIMVK 257
+ GM EA+ + K
Sbjct: 934 RPGMTGEARRLLKTLFK 950
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 108/267 (40%), Gaps = 22/267 (8%)
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
C+ G+ ++ NS++ + C+ AL L R + ++A + S+N
Sbjct: 68 CFRPVPGDTLTL-------NSIILSYCSLRSLRPALSLL-RSSSGPQSQSQVAADTVSYN 119
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ QG + A V +M + S D ++ + + LC+ G++ EA L EM +
Sbjct: 120 IFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAAL-AEMLVR 178
Query: 189 GVNPDEYT---YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
G D + L+D +V + +M G+ ++ YN LV G
Sbjct: 179 GRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDA 238
Query: 246 DEAKSFFDIMVKKLKMDD-----ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
D A +V+++K D +Y ++ G +DE + G++ G +
Sbjct: 239 DAALE----VVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVT 294
Query: 301 LQEFVKGELSKEGREEEVVKLMEKKER 327
L V G L ++G+ E L + ++
Sbjct: 295 LSALVDG-LCRDGQFSEAYALFREMDK 320
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 138/280 (49%), Gaps = 16/280 (5%)
Query: 23 DGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKM 82
DG D ++F E+ ++ G D YG+L+ G G +EA + + E V ++ +
Sbjct: 170 DGTVDAGLKIFLEMPKR--GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP-- 225
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+ V S+++ LC + DEA++ + MK++ P N+ +++ + DG C GR
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEP-----NVFTYSSLMDGLCKDGRSLQ 280
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+E+F M C P+ +++ LI LCK + EA EL M+ +G+ PD YG ++
Sbjct: 281 AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVIS 340
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV--GMLDEAKS-----FFDIM 255
+++ + A + +M+ G+ PN +N V +V G+ S + +
Sbjct: 341 GFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMR 400
Query: 256 VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+ + ++ + + ++K L G+ + +++V I+ DG I
Sbjct: 401 SRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCI 440
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 88 NSVLDALC-NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N ++ ALC N+G D LK+F M P ++ + G C GR +A ++
Sbjct: 160 NVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSY-----TYGTLISGLCRFGRIDEAKKL 214
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
F +M E C+P +++ +LI+ LC + + EA EM KG+ P+ +TY LMD +
Sbjct: 215 FTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCK 274
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDAS 265
R F M+ G RPN+ Y L+ L + + EA D M ++ LK D
Sbjct: 275 DGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGL 334
Query: 266 YKFMMKALSDGGK-------LDEILEIVGGI 289
Y ++ K LDE+ I+GGI
Sbjct: 335 YGKVISGFCAISKFREAANFLDEM--ILGGI 363
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 121/300 (40%), Gaps = 46/300 (15%)
Query: 64 EEAMECYNEAVGE--NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E++M ++ A E N V + VL + N KF A L RMK E+
Sbjct: 30 EKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSAN-KFKAAEDLIVRMKIEN-----CV 83
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC-------------------------- 155
V+ + GY R D++ VF KM ++ C
Sbjct: 84 VSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKF 143
Query: 156 ---------SPDTLSFNNLIDQLCKN-GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
P S N LI LC+N G + +++ EM +G +PD YTYG L+
Sbjct: 144 YKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLC 203
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDA 264
R+D+ F +MV+ P + Y L+ L +DEA + + M K ++ +
Sbjct: 204 RFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVF 263
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+Y +M L G+ + +E+ ++ G + G L KE + +E V+L+++
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG-LCKEQKIQEAVELLDR 322
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 17/245 (6%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G + D R EE+K K G+ + Y SLM G G +AME +
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEEMKSK--GIEPNVFTYSSLMDGLCKDGRSLQAMELF 285
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ M V +++ LC K EA++L DRM + P + G + +
Sbjct: 286 EMMMARGCRPNM--VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKP-----DAGLYGKV 338
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF-------NNLIDQLCKNGMLAEAEELYG 183
G+C +F++A +M +P+ L++ N ++ LC N + A LY
Sbjct: 339 ISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLYL 397
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +G++ + T L+ + ++V G P+ + L+G +
Sbjct: 398 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKT 457
Query: 244 MLDEA 248
++ EA
Sbjct: 458 IVGEA 462
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 7/200 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG + YS LM G +DG S LFE + + G + V Y +L+ G +
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR--GCRPNMVTYTTLITGLCKEQKI 313
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA+E + +K A V+ C KF EA D M P RL N
Sbjct: 314 QEAVELLDRM--NLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWN 371
Query: 124 LG--SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+ + N + G C + A ++ M S + + +L+ LCK G +A +L
Sbjct: 372 IHVKTSNEVVRGLCANYPSR-AFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQL 430
Query: 182 YGEMSDKGVNPDEYTYGLLM 201
E+ G P + T+ LL+
Sbjct: 431 VDEIVTDGCIPSKGTWKLLI 450
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 146/316 (46%), Gaps = 17/316 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF + ++ L+ GF + GDS LF +K ++ D V Y +++ G
Sbjct: 123 RGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNC--LIPDCVSYNTVINGLCKGKRL 180
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA E + E G K ++V ++++D C NG +E L + M+ L +
Sbjct: 181 VEAKELFKEMKG--GECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEK-----MGLEGD 233
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++ + G+C +G + E+F +M +P+ ++++ L++ LCK EA ++
Sbjct: 234 VFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLD 293
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M+ V PD Y +L D + R D MV G PN YN ++ L + G
Sbjct: 294 TMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEG 353
Query: 244 MLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+D+A + M KK K D +Y ++K L GK+DE ++++ ++ EF +
Sbjct: 354 RVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSK---EFHIKPD 410
Query: 303 EF----VKGELSKEGR 314
F V EL K+ R
Sbjct: 411 VFAFNLVIQELCKQRR 426
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 120/281 (42%), Gaps = 36/281 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D VYS L+ GF GD + LF E+ K V + V Y LM K +
Sbjct: 229 GLEGDVFVYSALISGFCSKGDIERGKELFNEMLRK--NVTPNVVTYSCLMNALCKKQKWK 286
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN- 123
EA + + G V+ VA + D L NG+ +A+K+ D M P + N
Sbjct: 287 EAAQMLDTMTG--CKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNA 344
Query: 124 --------------LG---------------SFNVMADGYCGQGRFKDAIEVFRKM--GE 152
LG +++ + G CG G+ +A+++ + E
Sbjct: 345 IINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKE 404
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
+ PD +FN +I +LCK L A+ +Y M ++G + TY +L+D ++
Sbjct: 405 FHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTK 464
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
++ VDSG+ PN A Y L+ L ++ ML AK F+
Sbjct: 465 ALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFN 505
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 150/315 (47%), Gaps = 9/315 (2%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ G ++G D + E + +K G D V Y +L+KG G +EA++
Sbjct: 340 VTYNAIINGLCKEGRVDDALGILETMAKK--GKKPDVVTYSTLVKGLCGVGKIDEAVDLL 397
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
N + + +K A N V+ LC + A +++ M P N+ ++N++
Sbjct: 398 NLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPS-----NIVTYNIL 452
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
DGY G+ A+E+++ + SP+ ++ LI+ LCK ML+ A+ L+ + G
Sbjct: 453 IDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGT 512
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P Y LM + + V+ F++M ++ P++ +N ++ ++ G ++ AK
Sbjct: 513 RPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKE 572
Query: 251 FFDIMVKKLKM-DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGEL 309
M+ + D+ ++ ++ G+LDE + ++ G + + +KG
Sbjct: 573 LLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKG-Y 631
Query: 310 SKEGREEEVVKLMEK 324
S +G+ E+VV ++++
Sbjct: 632 SLKGKTEKVVSMLQQ 646
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 6/205 (2%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
+N+ +FN++ G+C G A+++F M PD +S+N +I+ LCK L EA+EL
Sbjct: 127 LNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKEL 186
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ EM P+ T+ L+D + V++G +M GL ++ VY+ L+
Sbjct: 187 FKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCS 246
Query: 242 VGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
G ++ K F+ M++K + + +Y +M AL K E +++ + G + +
Sbjct: 247 KGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM---TGCKVRPD 303
Query: 301 LQEF--VKGELSKEGREEEVVKLME 323
+ + + LSK GR + +K+++
Sbjct: 304 VVAYTVLADGLSKNGRASDAIKVLD 328
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 163/354 (46%), Gaps = 42/354 (11%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRL-------------------FEELKEK------ 39
G AD V Y L+ GF R + + R+ +EL++K
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322
Query: 40 ------LG--GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
LG G+V + Y +L+ ++A + E G ++ + V ++
Sbjct: 323 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRG--LEPNEVTYAILI 380
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
ALC G ++AL LFD+M++ K + V + +N + +GYC QG A + M
Sbjct: 381 HALCKRGMIEDALCLFDKMRD-----KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV 435
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ +P S++ LI LC+NG L+ EL+ EM+++G+ + YT+ L++ + ++D
Sbjct: 436 KEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMD 495
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ A F KM+DS + PN +N ++ VG + +A +D MV+ LK D+ +Y+ ++
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 555
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
L + + E V + + + + L + G +EGR E L ++
Sbjct: 556 SGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYG-FFREGRFTETYHLWDE 608
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G D V ++ ++ ++ D + LF E+KE+ GV D + Y ++ +
Sbjct: 609 MAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ--GVKPDDIFYTCMIDALSKE 666
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A+ C+++ V + S + V + +++ LC +G A L M + P +
Sbjct: 667 ENMIQALNCWDQMVVDGYSP--NTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 724
Query: 121 AVN-----------------------------LGSFNVMADGYCGQGRFKDAIEVFRKMG 151
N + SFN++ G C G+ ++AI++ K+
Sbjct: 725 TYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKIT 784
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
E SPD +S++ +I +LCK G + +A EL+ EM KG+ PD Y + + C D
Sbjct: 785 ESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESD 844
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLV 236
+ M+ SG++PN Y L+
Sbjct: 845 KALGIYTNMIRSGVQPNWDTYRALL 869
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 144/325 (44%), Gaps = 11/325 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D VY+ + + + DG L ++ + GV + V Y LM G
Sbjct: 189 MLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE--GVKASAVPYNVLMYGLCKN 246
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA+E N V N V V +++ C + + AL++ M P
Sbjct: 247 MRVQEAVEVKNVMV--NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSE- 303
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ + M D + ++A + K+G+ P+ ++N LID+LCKN +A+
Sbjct: 304 ----ANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM+ +G+ P+E TY +L+ A + ++D F KM D G++ + YN L+
Sbjct: 360 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 419
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G LD A+ MVK+ L ASY ++ L G L +E+ + + G +
Sbjct: 420 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 479
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+ G K+ + +E +L +K
Sbjct: 480 TFTALING-FCKDKKMDEAARLFDK 503
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 142/312 (45%), Gaps = 18/312 (5%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+ + V ++ ++ G+ G+ F+L++++ E G+ D Y SL+ G + +A
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM--GLKPDNYTYRSLISGLCLTSGVSKA 567
Query: 67 MECYNEAVG--ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
NE V ENS ++ + ++L G+F E L+D M + + ++L
Sbjct: 568 ----NEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAV-----RGVKLDL 618
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
SF ++ Q + + +FR+M E PD + + +ID L K + +A + +
Sbjct: 619 VSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ 678
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G +P+ T+ +L++ + + ++M+ + PN YN + G
Sbjct: 679 MVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGD 738
Query: 245 LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEE 300
+++AK M++ S+ ++K L GK+ E ++++ I + G I +S
Sbjct: 739 MEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTI 798
Query: 301 LQEFVK-GELSK 311
+ E K G+++K
Sbjct: 799 IHELCKMGDINK 810
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 2/163 (1%)
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
+ ++ L K A A +L+ +M GV+ DEY Y + A E +D +M
Sbjct: 167 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 226
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDE 281
G++ + YN L+ L + + EA ++MV + D+ +Y+ ++ +L+
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
L I ++ G + SE F+ EL K+ EE L K
Sbjct: 287 ALRITHDMIRLGFVP-SEANCSFMIDELRKKELVEEAFSLACK 328
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 11/297 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDS-DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
M G A V Y+ ++ G++R D RL E +KE G D ++Y L+ G
Sbjct: 8 MMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKE--SGKKPDEILYNCLVNGLVN 65
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G E A + ++ + V + V +++ N G+ + KLF MK++ P
Sbjct: 66 SGRLEAAEKILDDM--KRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESP-- 121
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N ++N + GY +G FK+A+E++ +M C+ D ++N I K G+L + E
Sbjct: 122 ---NSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDME 178
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L EM KGV PD+ TY L+D + + R+M ++G RPN+ YN ++
Sbjct: 179 RLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSA 238
Query: 240 VQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+ + EA F ++ K + + +Y M+ G E ++ +++ G I
Sbjct: 239 RKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCI 295
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 10/275 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
A+ V Y+ L+ + G +LF+E+K+K G + Y +L++GY KG+ +EA+
Sbjct: 86 ANLVTYTNLIKEYANTGRLQDCRKLFQEMKDK--GESPNSWTYNALIQGYGRKGLFKEAL 143
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E Y+E G + + N + G ++ +L D M + PP ++ ++
Sbjct: 144 ELYDEMDGVGCAKDVHTY--NIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQV-----TY 196
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + D Y + F A E+ R+M E P+ ++N ++ K +AEA +L+ +
Sbjct: 197 NTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKS 256
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
KGV P+ TY ++ + A + +M+++G P + Y+ L+ GM E
Sbjct: 257 KGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQE 316
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
A + F M K + D Y +M A G+ E
Sbjct: 317 ALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCRE 351
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
RL +E+ K GV D V Y +L+ Y K +A E E + + + N +
Sbjct: 179 RLLDEMDTK--GVPPDQVTYNTLLDVYAKKSYFVKAHEILREMT--EAGYRPNIWTYNIM 234
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
L + EA +LF+ +K++ P N+ +++ M Y G + +A +++ +M
Sbjct: 235 LSSARKEQSVAEATQLFENLKSKGVVP-----NIVTYSAMLSLYGRHGLYTEAAKLWDEM 289
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E C P ++++ LI+ +GM EA + +M G+ PD Y LMDA + R
Sbjct: 290 IEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRC 349
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ + +M G P+ Y LV G L
Sbjct: 350 REAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 171/395 (43%), Gaps = 50/395 (12%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K V V Y+ L+ G R G+ D + +++ + G+ D V + L++G+ G
Sbjct: 376 KNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKH--GLCPDVVTFTILVRGFCQMGNL 433
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A E ++E + +K +A + + G +A + + MK E PP +
Sbjct: 434 PMAKELFDEMLSR--GLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPP-----D 486
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L ++NV+ +G C G F DA E+ +KM PD +++ ++I +G+L +AEE++
Sbjct: 487 LITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFS 546
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M KG++P TY +L+ + R+D YF +M D G+ PN+ YN L+ L +
Sbjct: 547 DMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKEN 606
Query: 244 MLDEAKSFF------------------------------------DIMVKKLKMDDASYK 267
M+D A + F D++ +++K D ++
Sbjct: 607 MMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHS 666
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK--- 324
+MK LS KL +L + L I + + FVK E SK + + EK
Sbjct: 667 ALMKHLSKDYKLLAVLRLENLPLAIVEINSTWIAEGFVKLEESKNNSHFRAIHVFEKGGF 726
Query: 325 --KEREKAEAKAREAEAAEAAKRSARAAIASLIPS 357
K AK+R +A R + IP+
Sbjct: 727 LEPFLGKLCAKSRVLKALICKAMDLRETLVHEIPN 761
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 32/337 (9%)
Query: 3 VKGFVADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
++ F DP V Y+ L+ G G+ D L E++ + G+ Y L++G+ K
Sbjct: 233 MRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMS--MLGLKVSAHTYNPLIRGFCKK 290
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M EEA + E +G + + V N+++ +LC G+ +A + D M NE P
Sbjct: 291 EMFEEANDLRREMLGRGALP--TVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMP--- 345
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L S+N + GY G F +A+ +F ++ P +++N LID C+ G L A+
Sbjct: 346 --DLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKG 403
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY-NRLVGKL 239
+ +M G+ PD T+ +L+ ++ + F +M+ GL+P+ Y R+VG+L
Sbjct: 404 MKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGEL 463
Query: 240 ------VQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVG-----G 288
GM +E K+ + D +Y ++ L G D+ E+V G
Sbjct: 464 KLGNPSKAFGMKEEMKA------EGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEG 517
Query: 289 ILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKK 325
I+ D S + G L K EEV M KK
Sbjct: 518 IVPDHVTYTSIIHAHLISGLLRK---AEEVFSDMLKK 551
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 12/234 (5%)
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
K M E E Y+ + ++ + V N+++D+ C G+ A+++ D M+ P
Sbjct: 185 KSMVNEVEEVYSVMI--KCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDP-- 240
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N S+NV+ +G G+G F A E+ +M ++N LI CK M EA
Sbjct: 241 ---NDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEAN 297
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L EM +G P TY +M + + RV D Y MV+ L P+L YN L+
Sbjct: 298 DLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGY 357
Query: 240 VQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
++G EA F ++ K L +Y L DGG L+I G+ DD
Sbjct: 358 SRLGNFAEALLLFSELRSKNLVPSVVTY----NTLIDGGCRTGNLDIAKGMKDD 407
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 34/269 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D V ++ L+ GF + G+ LF+E+ + G+ D + Y + + G
Sbjct: 408 MIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSR--GLKPDCIAYTTRIVGELKL 465
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
G +A E E + + N +++ LC G FD+A +L +M+ E P
Sbjct: 466 GNPSKAFGMKEEMKAEGFPPDL--ITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHV 523
Query: 118 ---------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
K + ++ ++ V+ Y +GR A + F +M
Sbjct: 524 TYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEM 583
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
+ SP+ +++N LI LCK M+ A L+ EM KGV+P++YTY +L++ +
Sbjct: 584 QDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYW 643
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
D ++ M+D ++P+ ++ L+ L
Sbjct: 644 QDALKLYKDMLDREIKPDSCTHSALMKHL 672
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
V++ +++ + + + + VF KM PD + N ++ L M+ E EE+
Sbjct: 135 VSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEV 194
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
Y M + P T+ +MD+ + V M G PN YN LV L
Sbjct: 195 YSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSG 254
Query: 242 VGMLDEAKSFFDIM-VKKLKMDDASYKFMMK 271
G D AK + M + LK+ +Y +++
Sbjct: 255 KGEFDRAKELIEQMSMLGLKVSAHTYNPLIR 285
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 11/281 (3%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V++Y ++ GF + + + + +K K G D V + ++ + KG + A+
Sbjct: 42 PDVFAYNAVISGFCKANRIESAKTVLDRMKRK--GFSPDVVTHNIMIGTFCGKGKIDLAL 99
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + E + +N+ K + + +++A G DEALKL D M + P ++
Sbjct: 100 KVFEELLKDNNC-KPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTF-----TY 153
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
NV+ G C +G+ A E R + C PD +++N L+ L G E E+ E+
Sbjct: 154 NVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFS 213
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G P+ TY +L+ + ++++ + M + GL P+ Y+ L+ + G LD
Sbjct: 214 RGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDM 273
Query: 248 AKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVG 287
A F D M+ + D +Y +M AL G D +EI G
Sbjct: 274 AIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFG 314
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+F +G + V YS L+ RDG + L + +KEK G+ D Y L+ + +
Sbjct: 211 IFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEK--GLTPDAYCYDPLIAAFCRE 268
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+E + + + + V N+++ ALC NG D A+++F ++ PP
Sbjct: 269 GKLDMAIEFLDCMICDGFLPDI--VNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPP--- 323
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ S+N M G A+ + +M PD +++N+LI LC++GM+ EA
Sbjct: 324 --NVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIG 381
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
L +M P+ +Y ++ + +R+DD M+++G +PN Y L+
Sbjct: 382 LLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLI 437
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 132/297 (44%), Gaps = 21/297 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF D V ++ ++ F G D ++FEEL K + Y L++ Y ++G
Sbjct: 73 KGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELL-KDNNCKPTLITYTILIEAYILEGGI 131
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA++ +E + ++ N + LC GK D A + + + P +
Sbjct: 132 DEALKLLDEMLSR--GLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI--- 186
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N++ QG++ + + ++ C P+ ++++ LI LC++G + E+ L
Sbjct: 187 --TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVK 244
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +KG+ PD Y Y L+ A ++D + M+ G P++ YN ++ L + G
Sbjct: 245 VMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNG 304
Query: 244 MLDEAKSFFDIMVKKLKMDD-------ASYKFMMKALSDGGKLDEILEIVGGILDDG 293
D A F K+D+ +SY M+ AL G L ++ +L G
Sbjct: 305 NGDHAVEIFG------KLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKG 355
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 121/245 (49%), Gaps = 8/245 (3%)
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRF 140
K A N+V+ C + + A + DRMK + P ++ + N+M +CG+G+
Sbjct: 41 KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSP-----DVVTHNIMIGTFCGKGKI 95
Query: 141 KDAIEVFRK-MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
A++VF + + + C P +++ LI+ G + EA +L EM +G+ PD +TY +
Sbjct: 96 DLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNV 155
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKK 258
+ + +VD + R + G +P++ YN L+ L+ G DE + + +I +
Sbjct: 156 ITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRG 215
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
+ + +Y ++ +L GK++E + +V ++ + G+ + + +EG+ +
Sbjct: 216 CEPNVVTYSILISSLCRDGKIEESVNLV-KVMKEKGLTPDAYCYDPLIAAFCREGKLDMA 274
Query: 319 VKLME 323
++ ++
Sbjct: 275 IEFLD 279
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 127/320 (39%), Gaps = 35/320 (10%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ + G ++G D F L + G D + Y L++ +
Sbjct: 141 MLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR--GCKPDVITYNILLRALLNQ 198
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +E + +E + + V + ++ +LC +GK +E++ L MK + P
Sbjct: 199 GKWDEGEKWMSEIFSRGC--EPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAY 256
Query: 121 AVN------------------------------LGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ + ++N + C G A+E+F K+
Sbjct: 257 CYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKL 316
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E C P+ S+N ++ L +G A + +M KG++PD TY L+ V
Sbjct: 317 DEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMV 376
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
D+ M+ +PN+ Y ++ L + +D+A M++ + ++ +Y +
Sbjct: 377 DEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLL 436
Query: 270 MKALSDGGKLDEILEIVGGI 289
++ + G + +E+ +
Sbjct: 437 IEGIGFSGSRTQAMELANSL 456
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 4/160 (2%)
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
PD + LI + + +A + G + G PD + Y ++ + NR++ T
Sbjct: 8 PDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTV 66
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK--KLKMDDASYKFMMKALS 274
+M G P++ +N ++G G +D A F+ ++K K +Y +++A
Sbjct: 67 LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
G +DE L+++ +L G+E + L KEG+
Sbjct: 127 LEGGIDEALKLLDEMLSR-GLEPDTFTYNVITRGLCKEGK 165
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 152/346 (43%), Gaps = 33/346 (9%)
Query: 2 FVKGFVADP--VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
FVK V P V Y+ L+ + +G++ R+ +E+ +K G + Y L++ +
Sbjct: 381 FVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQK--GCAPNSFTYNVLLQSLWK 438
Query: 60 KGMEEEAMECYNEAVGENSSVK---MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN- 115
G EA E + E S K + + N ++D LC N K D A+ + D M NE +
Sbjct: 439 AGRITEA-----ERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSL 493
Query: 116 -----------------PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
KR + +++ + C +GRF +A + +M SPD
Sbjct: 494 ALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPD 553
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
++ ++ I CK+G + A ++ +M KG P TY LL+ E + D+
Sbjct: 554 SVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLIS 613
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGG 277
+M G+ PN+ YN L+ + GM+++A D M++ ++ + S++ ++KA
Sbjct: 614 EMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTS 673
Query: 278 KLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+ L G + E L + +LS GR E + ++E
Sbjct: 674 DFSAAQRVFDASLSTCGQK--EVLYSLMCTQLSTYGRWLEAMNILE 717
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 140/326 (42%), Gaps = 86/326 (26%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
VV + ++ GF R+G D RL E ++++ G+ + V +
Sbjct: 213 VVCNTVVAGFCREGQVDEAERLVERMRDE--GLAPNVVTF-------------------- 250
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM--KNEHNPPKRLAVNLGSFN 128
N+ + ALC G+ +A ++F+ M K E P+ V +F+
Sbjct: 251 -----------------NARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQV---TFD 290
Query: 129 VMADGYCGQGRFKDA---IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
VM G+C G +A +++ R G R S+N + L +NGM+ EA+EL EM
Sbjct: 291 VMLSGFCEAGMVDEARVLVDIMRCGGFLR---RVESYNRWLSGLVRNGMVGEAQELLREM 347
Query: 186 SDKGVNPDEYTYGLLMDA-C-----FEVNRVD----------DGATY------------- 216
+ +GV P+ YTY +++D C F+V +V+ D TY
Sbjct: 348 AHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNA 407
Query: 217 ------FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+M G PN YN L+ L + G + EA+ + M +K +D AS +
Sbjct: 408 AAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNII 467
Query: 270 MKALSDGGKLDEILEIVGGILDDGGI 295
+ L KLD ++IV G+ ++G +
Sbjct: 468 IDGLCRNNKLDMAMDIVDGMWNEGSL 493
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 7/208 (3%)
Query: 85 VANNSVLDALCNNGKFDEALK-LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
+ ++++ ALC G+FDEA K L + + + +P L ++ GYC G+ A
Sbjct: 520 ITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVL------YDTFIHGYCKHGKTSLA 573
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
++V R M + C P T ++N LI + E +L EM KG+ P+ TY L+ +
Sbjct: 574 VKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKS 633
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD 263
E V+ +M+ + + PN+ + L+ + A+ FD + +
Sbjct: 634 FCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQKE 693
Query: 264 ASYKFMMKALSDGGKLDEILEIVGGILD 291
Y M LS G+ E + I+ +L+
Sbjct: 694 VLYSLMCTQLSTYGRWLEAMNILETVLE 721
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 120/272 (44%), Gaps = 22/272 (8%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VY+ L+L +++ D V L+++L L G D L++ G E A +
Sbjct: 117 VYNRLLLAALQEARFDLVESLYKDLL--LSGAAPDVFTRNILLQALCAAGRMELARRVF- 173
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+A+ E + +A C G+ +AL + D M +NL N +
Sbjct: 174 DAMPERNEFSFGILAR-----GYCRAGRSMDALGVLDSMPT---------MNLVVCNTVV 219
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-- 189
G+C +G+ +A + +M + +P+ ++FN I LCK G + +A ++ +M +K
Sbjct: 220 AGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWER 279
Query: 190 --VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
PD+ T+ +++ E VD+ M G + YNR + LV+ GM+ E
Sbjct: 280 GLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGE 339
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
A+ M + ++ + +Y ++ L GK
Sbjct: 340 AQELLREMAHEGVQPNSYTYNIIVDGLCKEGK 371
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 115/285 (40%), Gaps = 21/285 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKL-----GGVVSDGVVYGSLMKGYF 58
K + D + YS L+ ++G F+E K+KL + D V+Y + + GY
Sbjct: 513 KRCLPDRITYSTLVSALCKEGR-------FDEAKKKLLEMIGKDISPDSVLYDTFIHGYC 565
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G A++ + E K S N ++ DE LKL MK K
Sbjct: 566 KHGKTSLAVKVLRDM--EKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKG-----K 618
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
+ N+ ++N + +C +G A+ + +M + P+ SF LI CK + A
Sbjct: 619 GICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAA 678
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
+ ++ + S E Y L+ R + +++ + + Y +++
Sbjct: 679 QRVF-DASLSTCGQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEG 737
Query: 239 LVQVGMLDEAKSFFDI-MVKKLKMDDASYKFMMKALSDGGKLDEI 282
L +V +D + MVK D A++ ++ ALS+ GK +
Sbjct: 738 LCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSERGKKQHV 782
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 10/225 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG Y+ L+ GF +SD + +L E+K K G+ + + Y SL+K + +GM
Sbjct: 583 KGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGK--GICPNVMTYNSLIKSFCERGMV 640
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+AM +E + +N V + + ++ A C F A ++FD + + L
Sbjct: 641 NKAMPLLDEML-QNEIVP-NITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQKEVL--- 695
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++M GR+ +A+ + + E R S + +I+ LCK + L
Sbjct: 696 ---YSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLK 752
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
+ KG + D + ++DA E + +KM++ R N
Sbjct: 753 LLMVKGYSFDPAAFMPVIDALSERGKKQHVDMLSQKMMEMAERDN 797
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 141/320 (44%), Gaps = 13/320 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V Y+ L+ GF + G D R ++L G D + + +++ G
Sbjct: 245 KGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSY--GCQPDVISHNMILRSLCSGGRW 302
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAV 122
+AM+ A S V N +++ LC G +AL + + M K+ H P R
Sbjct: 303 MDAMKLL--ATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSR--- 357
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
SFN + G+C AIE M C PD +++N L+ LCK+G + +A +
Sbjct: 358 ---SFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVIL 414
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
++S KG +P +Y ++D +V + + +M GL+P+L +VG L +
Sbjct: 415 SQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSRE 474
Query: 243 GMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
G + EA FF + + ++ + Y ++ L + ++ + ++ G
Sbjct: 475 GKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATY 534
Query: 302 QEFVKGELSKEGREEEVVKL 321
+KG ++ EG E+ KL
Sbjct: 535 TTLIKG-ITYEGLAEDASKL 553
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 143/306 (46%), Gaps = 15/306 (4%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSS 79
+R+G+ + R E + K G D + +L++ + G + A + + E S
Sbjct: 89 LIRNGELEEGSRFLEYMTNK--GKSPDVIACTALIREFCKIGRTKNASQIM--GILEESG 144
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ + N ++ C +G+ +EAL++ DRM ++ N +++ + C +G+
Sbjct: 145 AVIDVTSYNVLISGYCKSGEIEEALRVLDRMG--------VSPNAATYDAVLCSLCDRGK 196
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
K A++V + + +C PD ++ LID CK + +A +L+ EM +KG PD TY +
Sbjct: 197 LKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNV 256
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKL 259
L+ + R+D+ + +K+ G +P++ +N ++ L G +A M++K
Sbjct: 257 LIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 316
Query: 260 KMDD-ASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG--REE 316
+ ++ ++ L G L + L ++ + G S ++G + +G R
Sbjct: 317 CLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAI 376
Query: 317 EVVKLM 322
E +++M
Sbjct: 377 EYLEIM 382
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 13/192 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ +DG D + +L K G + Y +++ G
Sbjct: 382 MVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSK--GCSPSLISYNTVIDGLLKV 439
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A+E E + +K + SV+ L GK EA+K F + KR
Sbjct: 440 GKAELAVELLEEMCYKG--LKPDLITCTSVVGGLSREGKVREAMKFFHYL-------KRF 490
Query: 121 AVNLGSF--NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
A+ +F N + G C + AI+ M C P ++ LI + G+ +A
Sbjct: 491 AIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDA 550
Query: 179 EELYGEMSDKGV 190
+L E+ +G+
Sbjct: 551 SKLSNELYSRGL 562
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+ +L +NG L E M++KG +PD L+ ++ R + + + +SG
Sbjct: 86 LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEI 285
++ YN L+ + G ++EA D M + + A+Y ++ +L D GKL + +++
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM--GVSPNAATYDAVLCSLCDRGKLKQAMQV 203
Query: 286 VG 287
+G
Sbjct: 204 LG 205
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 8/245 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D V + SL+ GY E+A+ +++ +G K + V +++ LC N +
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG--MGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
A++LF++M + P N+ ++N + G C GR+ DA + R M + R P+ ++
Sbjct: 206 HAVELFNQMGTNGSRP-----NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
F LID K G L EA+ELY M V PD +TYG L++ +D+ F M
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 222 DSGLRPNLAVYNRLVGKLVQVGML-DEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLD 280
+G PN +Y L+ + + D K F+++ K + + +Y +++ G+ D
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 281 EILEI 285
E+
Sbjct: 381 VAQEV 385
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 14/284 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLG-GVVSDGVVYGSLMKGYFMKGME 63
GF D V ++ L+ G+ + LF+++ LG G + V Y +L++
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI---LGMGFKPNVVTYTTLIRCLCKNRHL 204
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKF-DEALKLFDRMKNEHNPPKRLAV 122
A+E +N+ +G N S + + V N+++ LC G++ D A L D MK +R+
Sbjct: 205 NHAVELFNQ-MGTNGS-RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK------RRIEP 256
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ +F + D + G+ +A E++ M + PD ++ +LI+ LC G+L EA +++
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M G P+E Y L+ + RV+DG F +M G+ N Y L+ V
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 243 GMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
G D A+ F+ M ++ D +Y ++ L GK+++ L I
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 11/220 (5%)
Query: 43 VVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE 102
V D YGSL+ G M G+ +EA + + + E + + V +++ C + + ++
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMF--YLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 103 ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
+K+F M K + N ++ V+ GYC GR A EVF +M R PD ++
Sbjct: 347 GMKIFYEMSQ-----KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
N L+D LC NG + +A ++ M + ++ + TY +++ ++ +V+D F +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMD 262
G++PN+ Y ++ + G++ EA S F KK+K D
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLF----KKMKED 497
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 109/225 (48%), Gaps = 11/225 (4%)
Query: 10 PVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V++Y L+ G G D ++F ++ G + V+Y +L+ G+ E+ M
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMER--NGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + E V + + ++ C G+ D A ++F++M + PP ++ ++
Sbjct: 349 KIFYEM--SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP-----DIRTY 401
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
NV+ DG C G+ + A+ +F M + + +++ +I +CK G + +A +L+ +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
KG+ P+ TY ++ + + + F+KM + G PN +VY
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S + +L + ++D + LF++M+ PP L + N++ C +
Sbjct: 82 SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPL-----LCTCNIVMHCVCLSSQPCR 136
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A KM + PD ++F +L++ C + +A L+ ++ G P+ TY L+
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML-DEAKSFFDIMVKKLKM 261
+ ++ F +M +G RPN+ YN LV L ++G D A D+M ++++
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 262 DDASYKFMMKALSDGGKLDEILEI 285
+ ++ ++ A GKL E E+
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKEL 280
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 80/197 (40%), Gaps = 2/197 (1%)
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
+F DA+++F +M R P + F L+ + K L+ +M G+ P T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVK 257
++M ++ + + KM+ G P+L + L+ +++A + FD I+
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 258 KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
K + +Y +++ L L+ +E+ + +G V G L + GR +
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG-LCEIGRWGD 241
Query: 318 VVKLMEKKEREKAEAKA 334
L+ + + E
Sbjct: 242 AAWLLRDMMKRRIEPNV 258
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 153/355 (43%), Gaps = 44/355 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + +VYS L+ G+ R G V ++FEE+ GV D +++ + KG
Sbjct: 180 GVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRL--GVEPDVIMFTGFIDDLCKKGRIG 237
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN- 123
+A++ + V ++ + V N +++ LC G EAL L + M ++ P + N
Sbjct: 238 KAVKVKDIMV--QRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNT 295
Query: 124 -------------------------------LGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
+ +FN + G C GR + AI V M E
Sbjct: 296 LIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAE 355
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
C + +++N LI + + A L E+ G+ PD +TY +L++ ++ VD
Sbjct: 356 RGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDR 415
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKA 272
+ R M G+R L Y L+ L Q+GM+++A F+ M +D +Y MM
Sbjct: 416 AEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYG 475
Query: 273 LSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVK-GELSKEGREEEVVKLM 322
G + +++ +LD+G + +S + F K G+L + E V+K M
Sbjct: 476 ACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEE---AERVLKQM 527
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 128/284 (45%), Gaps = 12/284 (4%)
Query: 7 VADPVVYSYLMLGFVRDG-DSDGVFRLFEEL-KEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
V D V Y+ ++ R G D L ++ +E + V Y +M+G +
Sbjct: 73 VRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTD 132
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA+ + S V+ V +++ LC+ + D AL+L M P N+
Sbjct: 133 EAVALLRSM--QASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHP-----NV 185
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + GYC GR++D +VF +M PD + F ID LCK G + +A ++
Sbjct: 186 IVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDI 245
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +G+ P+ TY +L++ + V + +M D G+ P++ YN L+ L V
Sbjct: 246 MVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLE 305
Query: 245 LDEAKSFFDIMVK---KLKMDDASYKFMMKALSDGGKLDEILEI 285
+D A + M++ ++ D ++ ++ L G++ + + +
Sbjct: 306 MDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISV 349
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 119/284 (41%), Gaps = 9/284 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V Y+ L+ G + DG L EE+ + V D V + S++ G G
Sbjct: 284 KGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRM 343
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+A+ E + E + + V N ++ K + A+ L + + P
Sbjct: 344 RQAIS-VREMMAERGCM-CNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSF--- 398
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+++++ +G+ A R M + + + L+ LC+ GM+ +A L+
Sbjct: 399 --TYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFN 456
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM D D Y +M + + + M+D GL P+ Y+ L+ ++G
Sbjct: 457 EM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLG 515
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
L+EA+ M D A + ++K S G++++IL+++
Sbjct: 516 DLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLI 559
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 141/325 (43%), Gaps = 46/325 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF K D V ++ L+ F ++G D V L E++ G + D + Y +++ G+
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH--GCMPDVITYTTVINGF--- 401
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
C G DEA+ L M + P
Sbjct: 402 ----------------------------------CKEGLIDEAVMLLKSMSSCGCKP--- 424
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N S+ ++ G C GR+ DA E+ +M + C P+ ++FN LI+ LCK G++ +A E
Sbjct: 425 --NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M G +PD +Y ++D + + ++ MV+ G+ PN +Y+ + L
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G +++ FD I ++ D Y ++ +L + D ++ ++ +G +
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+KG L+ EG +E +L+ +
Sbjct: 603 TYTMLIKG-LASEGLAKEAQELLSE 626
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 17/242 (7%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA-----VNLGSFNVMADGYCGQGRFKD 142
N VL+A+C G DEA+ L ++LA ++ S+N + G C R+ D
Sbjct: 185 NLVLNAICEQGCVDEAVGLL----------RKLAFFGCEADIVSYNAVLKGLCMAKRWGD 234
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
E+ +M C+P+ ++FN LI LC+NG+ E+ +MS+ G PD Y ++D
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID 294
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+ ++ +M GL+PN+ YN ++ L EA+ M +K +
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL 354
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
DD ++ ++ G +D ++E++ +L G + + G KEG +E V L
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING-FCKEGLIDEAVML 413
Query: 322 ME 323
++
Sbjct: 414 LK 415
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 166/386 (43%), Gaps = 62/386 (16%)
Query: 5 GFVADPVVYSYLMLGFV---RDGDSDGVFRLFEELKEKLGGV-VSDGVVYGSLMKGYFMK 60
G AD V Y+ ++ G R GD EEL +++ V + +V + + GY +
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGD-------VEELMDEMVRVDCAPNIVTFNTLIGYLCR 263
Query: 61 -GMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G+ E E + G ++M A +++D +C G + A ++ +RM P
Sbjct: 264 NGLFERVHEVLAQMSEHGCTPDIRMYA----TIIDGICKEGHLEVANEILNRM-----PS 314
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
L N+ +N + G C R+K+A E+ +M + C D ++FN L+D C+NG++
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374
Query: 178 AEELYGEMSDKGVNPDEYTY----------GLL---------MDAC-------------- 204
EL +M G PD TY GL+ M +C
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434
Query: 205 --FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKM 261
R D +M+ G PN +N L+ L + G++++A ++V
Sbjct: 435 GLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 494
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
D SY ++ L GK +E LE++ ++ + GI + + + LS+EGR +V+++
Sbjct: 495 DLISYSTVIDGLGKAGKTEEALELL-NVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553
Query: 322 ME--KKEREKAEAKAREAEAAEAAKR 345
+ K +++A A + KR
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSLCKR 579
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G +PV ++ L+ + G + L +++ + G D + Y +++ G
Sbjct: 452 MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML--VNGCSPDLISYSTVIDGLGKA 509
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEA+E N V N + + + +S+ AL G+ ++ +++FD +K+ +
Sbjct: 510 GKTEEALELLNVMV--NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD-----TTI 562
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +N + C + AI+ F M C P+ ++ LI L G+ EA+E
Sbjct: 563 RSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQE 622
Query: 181 LYGEMSDKG 189
L E+ +G
Sbjct: 623 LLSELCSRG 631
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 7/202 (3%)
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
PP N +F + G C +GR DA+EV +M C+P ++ +++ C++G
Sbjct: 108 PP-----NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGF 162
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+ + M KG D L+++A E VD+ RK+ G ++ YN +
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAV 222
Query: 236 VGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+ L + + D MV+ + ++ ++ L G + + E++ + + G
Sbjct: 223 LKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGC 282
Query: 295 IEFSEELQEFVKGELSKEGREE 316
+ G + KEG E
Sbjct: 283 TPDIRMYATIIDG-ICKEGHLE 303
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 131/278 (47%), Gaps = 14/278 (5%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V+YS ++ +DG LF E+ EK G+ + Y ++ G+ G +A
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK--GIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + + + N+++ A GK EA KL D M + P + ++N
Sbjct: 353 LLRDMI--EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV-----TYN 405
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
M G+C RF DA +F M SPD ++FN +ID C+ + E +L E+S +
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ + TY L+ EV+ ++ F++M+ G+ P+ N L+ + L+EA
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 249 KSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
F+++ + K+ +D +Y ++ + G K+DE ++
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 135/288 (46%), Gaps = 19/288 (6%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYN--------EAVG---ENSSVKMSAV--ANN 88
G D V + +L+ G ++ EA+ + EAV + + ++ V N
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
++++ LC G+ EA L ++M K L +++ ++ + +G C G K A+ +
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVG-----KGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
KM E PD + ++ +ID+LCK+G ++A+ L+ EM +KG+ P+ +TY ++D
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYK 267
R D R M++ + P++ +N L+ V+ G L EA+ D M+ + D +Y
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
M+ + D+ + + + F+ + + + + EG +
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 120/281 (42%), Gaps = 13/281 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D V Y+ ++ GF + D +F+ + D V + +++ Y
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS------PDVVTFNTIIDVYCRA 445
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+E M+ E + + N+++ C + A LF M + P +
Sbjct: 446 KRVDEGMQLLREI--SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++ G+C + ++A+E+F + + DT+++N +I +CK + EA +
Sbjct: 504 TCN-----ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ + GV PD TY +++ + + D F KM D+G P+ + YN L+ +
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ G +D++ M DA M+ L G+LD+
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDK 659
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+AV N V+ + D A+ L+ +M+ +R+ +N+ SFN++ +C +
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKME-----IRRIPLNIYSFNILIKCFCDCHKLSF 159
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG---------------EMSD 187
++ F K+ + PD ++FN L+ LC ++EA L+G +M +
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE 219
Query: 188 KGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G+ P T+ L++ C E RV + A KMV GL ++ Y +V + ++G
Sbjct: 220 IGLTPVVITFNTLINGLCLE-GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG--- 275
Query: 247 EAKSFFDIMVK----KLKMDDASYKFMMKALSDGGK 278
+ KS +++ K +K D Y ++ L G
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 3/125 (2%)
Query: 136 GQGRFK---DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G FK DAI+ F M R + N +I + A LY +M + +
Sbjct: 80 GSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL 139
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+ Y++ +L+ + +++ + F K+ G +P++ +N L+ L + EA + F
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 253 DIMVK 257
MV+
Sbjct: 200 GYMVE 204
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 9/225 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G D Y+ L+ GF ++ D LF+E+ +K +V V Y SL+ G
Sbjct: 330 MSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQK--NMVPGIVTYSSLIDGLCKS 387
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + +E + + + + NS++D LC NG D A+ LF++MK++ P
Sbjct: 388 GRISYVWDLIDEM--RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSF 445
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+F ++ DG C GR KDA E F+ + D +N +I+ CK G+L EA
Sbjct: 446 -----TFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALT 500
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
+ +M + G P+ T+ ++++A F+ + D R+M+ GL
Sbjct: 501 MLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 154/338 (45%), Gaps = 48/338 (14%)
Query: 30 FRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNS 89
+ LF E+ K G+ +D V Y +L+ G+ + +EA+ NE V + ++ + N
Sbjct: 219 YGLFSEMTAK--GISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLK--TINPNVYTYNI 274
Query: 90 VLDALCNNGKFDEA--------------------------LKLFDRMKNEH--NPPKRLA 121
++DALC GK EA +++ K +H N +
Sbjct: 275 LVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMG 334
Query: 122 V--NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
V ++ S+ ++ +G+C +A+ +F++M + P +++++LID LCK+G ++
Sbjct: 335 VTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVW 394
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+L EM D+G+ + TY L+D + +D F KM D G+RP + L+ L
Sbjct: 395 DLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGL 454
Query: 240 VQVGMLDEAK-SFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ G L +A+ +F D++ K +D Y M+ G L+E L ++ + ++G + +
Sbjct: 455 CKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNA 514
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKARE 336
+ L +K E +KAE R+
Sbjct: 515 VTFDIIINA-------------LFKKDENDKAEKLLRQ 539
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 120/256 (46%), Gaps = 23/256 (8%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK-------LGGVVSDGVVYGSLMKGYFMK 60
D + YS LM DG F ++E K + L GV D Y L+ G+
Sbjct: 302 PDVITYSTLM---------DGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKN 352
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M +EA+ + E +N + V +S++D LC +G+ L D M++ P
Sbjct: 353 KMVDEALNLFKEMHQKN--MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIP---- 406
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++N + DG C G AI +F KM + P + +F L+D LCK G L +A+E
Sbjct: 407 -ANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQE 465
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ ++ KG + D Y Y ++++ + +++ T KM ++G PN ++ ++ L
Sbjct: 466 AFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALF 525
Query: 241 QVGMLDEAKSFFDIMV 256
+ D+A+ M+
Sbjct: 526 KKDENDKAEKLLRQMI 541
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 141/322 (43%), Gaps = 11/322 (3%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
+KG D + + L+ F G F + ++ ++ G + + +L+KG +KG
Sbjct: 87 LKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKR--GYQPHTITFTTLIKGLCLKGQ 144
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
+A+ +++ + + +K V+ ++++ +C G A+KL ++ P
Sbjct: 145 VNKALHFHDKLLAQ--GIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKP----- 197
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ +N + D C +A +F +M S D +++ LI C L EA L
Sbjct: 198 NVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLL 257
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM K +NP+ YTY +L+DA + +V + M+ + ++P++ Y+ L+ V
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLV 317
Query: 243 GMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
L +A+ F+ M + + D SY ++ +DE L + + +
Sbjct: 318 YELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377
Query: 302 QEFVKGELSKEGREEEVVKLME 323
+ G L K GR V L++
Sbjct: 378 SSLIDG-LCKSGRISYVWDLID 398
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA+ F +M R +P + FN ++D K + A L + KG+ PD T +L+
Sbjct: 42 DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILI 101
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLK 260
+ + ++ G + K++ G +P+ + L+ L G +++A F D ++ + +K
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIK 161
Query: 261 MDDASYKFMMKALSDGG 277
D SY ++ + G
Sbjct: 162 FDQVSYGTLINGVCKIG 178
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 82/218 (37%), Gaps = 43/218 (19%)
Query: 101 DEALKLFDRMKN-EHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
D+A+ F+RM H PP + FN + D + + A+ + ++ PD
Sbjct: 41 DDAVSQFNRMLCMRHTPP------IIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDL 94
Query: 160 LSFN-----------------------------------NLIDQLCKNGMLAEAEELYGE 184
++ N LI LC G + +A + +
Sbjct: 95 ITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDK 154
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ +G+ D+ +YG L++ ++ RK+ +PN+ +YN ++ L + +
Sbjct: 155 LLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQL 214
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ EA F M K + D +Y ++ KL E
Sbjct: 215 VSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKE 252
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 133/284 (46%), Gaps = 13/284 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF + + Y LM G R G D L ++ + V + L+ GY
Sbjct: 304 MLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP------TPNDVHFTILINGYVKS 357
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G +EA + + +N + N+++ LC G A+ + + M P
Sbjct: 358 GRLDEANAFLYDKMIKNGC-RPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTP--- 413
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL ++ + DG+C + + ++A V +M + + +N L+ LCKNG + +A +
Sbjct: 414 --NLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALD 471
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ GEMSDKG PD +T+ L+ +V+R +D +R M+ G+ N YN L+ +
Sbjct: 472 MLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFL 531
Query: 241 QVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEIL 283
+ G + EA K D++ + +D+ +Y ++KA G ++ L
Sbjct: 532 RGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKAL 575
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 114/238 (47%), Gaps = 9/238 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D ++ L+ G + + L+ ++ L GV+++ V Y +L+ + G
Sbjct: 479 KGCKPDIFTFNTLIFGLCKVDRKEDALALYRDML--LDGVIANTVTYNTLIHAFLRGGAI 536
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA++ N+ + + + N ++ A C G ++AL LFD M + P ++ N
Sbjct: 537 QEALKLVNDMLFRGCP--LDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCN 594
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L + +G C G+ +A+E+ R M +PD +++N+LI+ LCK G + EA L+
Sbjct: 595 L-----LINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFN 649
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
++ +G+ PD TY L+ DD + V++ PN + LV ++
Sbjct: 650 KLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIK 707
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 141/327 (43%), Gaps = 14/327 (4%)
Query: 11 VVYSYLMLGFVRDG--DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
V ++ L+ G+V+ G D F L++++ + G D + +L+ G KG+ A++
Sbjct: 345 VHFTILINGYVKSGRLDEANAF-LYDKMIKN--GCRPDVFTFNTLIHGLCKKGLMGSAVD 401
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
N+ + + + ++LD C + +EA + + M K +N+ +N
Sbjct: 402 MVNDMSANGCTPNL--ITYTTLLDGFCKKNQLEEAGYVLNEMS-----AKGFELNIMGYN 454
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
V+ C G+ A+++ +M + C PD +FN LI LCK +A LY +M
Sbjct: 455 VLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLD 514
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
GV + TY L+ A + + M+ G + YN L+ ++G ++A
Sbjct: 515 GVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKA 574
Query: 249 KSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
FD MV+K L + S ++ L GK+ LE++ ++ G + G
Sbjct: 575 LGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLING 634
Query: 308 ELSKEGREEEVVKLMEKKEREKAEAKA 334
L K G E L K + E + A
Sbjct: 635 -LCKMGNIREAFNLFNKLQAEGIQPDA 660
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 9/248 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF + + Y+ L+ ++G + E+ +K G D + +L+ G
Sbjct: 441 MSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDK--GCKPDIFTFNTLIFGLCKV 498
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+E+A+ Y + + + V + V N+++ A G EALKL + M P +
Sbjct: 499 DRKEDALALYRDMLLD--GVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEI 556
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + +C G + A+ +F +M P +S N LI+ LC+ G + A E
Sbjct: 557 -----TYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALE 611
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M +G+ PD TY L++ ++ + + F K+ G++P+ YN L+
Sbjct: 612 LLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHC 671
Query: 241 QVGMLDEA 248
+ GM D+A
Sbjct: 672 RAGMFDDA 679
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 8/194 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N VLD L + A +F M ++ P + +F V+ C +A +
Sbjct: 177 NVVLDILVSANCPSVAANVFYEMLSKGVIP-----TVYTFGVVMKALCMVNEVDNACSLL 231
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
R M ++ C P+++ + LI L K + EA +L EM G PD T+ ++ +
Sbjct: 232 RDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRL 291
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYK 267
NR+ +GA +M+ G PN Y L+ L +VG +DEA+ + K +D +
Sbjct: 292 NRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLN---KVPTPNDVHFT 348
Query: 268 FMMKALSDGGKLDE 281
++ G+LDE
Sbjct: 349 ILINGYVKSGRLDE 362
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 41/203 (20%)
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
G Y C P S+N ++D L + A ++ EM KGV P YT+G++M A VN V
Sbjct: 165 GVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEV 224
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ----------------VGMLDEAKSFFDI 254
D+ + R M G PN VY L+ L + +G L + +F D+
Sbjct: 225 DNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDV 284
Query: 255 MVKKLKMD--------------------DASYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+ +++ D +Y +M L GK+DE ++ +
Sbjct: 285 IYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPND 344
Query: 295 IEFSEELQEFVKGELSKEGREEE 317
+ F+ + +V K GR +E
Sbjct: 345 VHFTILINGYV-----KSGRLDE 362
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 14/279 (5%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V+YS ++ +DG LF E+ EK G+ + Y ++ G+ G +A
Sbjct: 289 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK--GIAPNVFTYNCMIDGFCSFGRWSDAQ 346
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + + + N+++ A GK EA KL D M + P + ++
Sbjct: 347 RLLRDMI--EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV-----TY 399
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N M G+C RF DA +F M SPD ++FN +ID C+ + E +L E+S
Sbjct: 400 NSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 455
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+G+ + TY L+ EV+ ++ F++M+ G+ P+ N L+ + L+E
Sbjct: 456 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 515
Query: 248 AKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEI 285
A F+++ + K+ +D +Y ++ + G K+DE ++
Sbjct: 516 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 554
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 131/283 (46%), Gaps = 14/283 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENS--------SVKMSAVANNSVLDA 93
G D V + +L+ G ++ EA+ + V S + + N++++
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLING 230
Query: 94 LCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
LC G+ EA L ++M K L +++ ++ + +G C G K A+ + KM E
Sbjct: 231 LCLEGRVLEAAALVNKMVG-----KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 285
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
PD + ++ +ID+LCK+G ++A+ L+ EM +KG+ P+ +TY ++D R D
Sbjct: 286 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 345
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM-DDASYKFMMKA 272
R M++ + P++ +N L+ V+ G L EA+ D M+ + D +Y M+
Sbjct: 346 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 405
Query: 273 LSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
+ D+ + + + F+ + + + + EG +
Sbjct: 406 FCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 448
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 120/281 (42%), Gaps = 13/281 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D V Y+ ++ GF + D +F+ + D V + +++ Y
Sbjct: 387 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS------PDVVTFNTIIDVYCRA 440
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+E M+ E + + N+++ C + A LF M + P +
Sbjct: 441 KRVDEGMQLLREI--SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 498
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N ++ G+C + ++A+E+F + + DT+++N +I +CK + EA +
Sbjct: 499 TCN-----ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 553
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ + GV PD TY +++ + + D F KM D+G P+ + YN L+ +
Sbjct: 554 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 613
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ G +D++ M DA M+ L G+LD+
Sbjct: 614 KAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDK 654
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 24/211 (11%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
+AV N V+ + D A+ L+ +M+ +R+ +N+ SFN++ +C +
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKME-----IRRIPLNIYSFNILIKCFCDCHKLSF 159
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG----------EMSDKGVNP 192
++ F K+ + PD ++FN L+ LC ++EA L+G +M + G+ P
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTP 219
Query: 193 DEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
T+ L++ C E RV + A KMV GL ++ Y +V + ++G + KS
Sbjct: 220 VVITFNTLINGLCLE-GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG---DTKSA 275
Query: 252 FDIMVK----KLKMDDASYKFMMKALSDGGK 278
+++ K +K D Y ++ L G
Sbjct: 276 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 306
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 3/125 (2%)
Query: 136 GQGRFK---DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G FK DAI+ F M R + N +I + A LY +M + +
Sbjct: 80 GSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL 139
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+ Y++ +L+ + +++ + F K+ G +P++ +N L+ L + EA + F
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 253 DIMVK 257
MV+
Sbjct: 200 GYMVE 204
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 141/321 (43%), Gaps = 11/321 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF A+ V + L+ G G + +L +E+ E+ G+V D + Y +L+ +G
Sbjct: 436 KGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLER--GLVLDSISYNTLILACCKEGKV 493
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EE + E V ++ N +L LCN GK +EA L+ K N P
Sbjct: 494 EEGFKLKEEMV--RRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAY--- 548
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ +M DGYC R ++ ++F++M + + + + LI C+NG + EA L
Sbjct: 549 --TYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRD 606
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M +G+ TY L+ + VD +M GL PN+ Y L+G ++G
Sbjct: 607 DMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLG 666
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+ + S M + + + +Y M+ G + +++ + G + +
Sbjct: 667 QMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYN 726
Query: 303 EFVKGELSKEGREEEVVKLME 323
G KEG+ EE +K+ +
Sbjct: 727 ALTNG-FCKEGKMEEALKVCD 746
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 132/279 (47%), Gaps = 10/279 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G+ + VVY+ L+ G+ R G+ ++ +++ G+ + V SL++GY
Sbjct: 296 RGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISN--GISPNSVTCNSLIQGYCKSNQM 353
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A E + + SV+ LC +FD AL M + P N
Sbjct: 354 EHAEHLLEEMLTGGGVINQGTFT--SVIHRLCLKCRFDSALLFIMEMLLRNFKP-----N 406
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
G ++ G C G+ +AIE++ ++ E + +T++ N LI LC+ G EA +L
Sbjct: 407 DGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLK 466
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM ++G+ D +Y L+ AC + +V++G +MV G++P++ YN L+ L +G
Sbjct: 467 EMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMG 526
Query: 244 MLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDE 281
++EA + K DA +Y M+ +++E
Sbjct: 527 KIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEE 565
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 153/322 (47%), Gaps = 11/322 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG ++L+ V+ + +++F+ + GV D ++ +++ + G
Sbjct: 156 KGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCH--CGVTPDVYLFSTMVNAFCTGGRV 213
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+E + + E V + V N+++ LC NG+ DEA + ++M+ E R+ +
Sbjct: 214 DDAIELFRKM--EKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKE-----RVKPS 266
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L ++ V+ +G RF +A + ++M + +P+ + +N LID C+ G ++ A ++
Sbjct: 267 LVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRD 326
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M G++P+ T L+ + N+++ +M+ G N + ++ +L
Sbjct: 327 DMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKC 386
Query: 244 MLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
D A F +++++ K +D ++ L GK E +E+ +L+ G +
Sbjct: 387 RFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSN 446
Query: 303 EFVKGELSKEGREEEVVKLMEK 324
+ G L + G +EE KL+++
Sbjct: 447 ALIHG-LCEAGSKEEAAKLLKE 467
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 8/229 (3%)
Query: 53 LMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN 112
L+ G G + EA+E + + + + + V +N+++ LC G +EA KL M
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKGFAA--NTVTSNALIHGLCEAGSKEEAAKLLKEMLE 470
Query: 113 EHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
+ L ++ S+N + C +G+ ++ ++ +M PD ++N L+ LC
Sbjct: 471 -----RGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNM 525
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
G + EA L+ E G PD YTYG+++D + NRV++G F++MV + N VY
Sbjct: 526 GKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVY 585
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
L+ + G + EA D M + + A+Y ++ LS+ G +D
Sbjct: 586 GTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVD 634
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 10/271 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ L+ G G + L+ E K+ G D YG ++ GY
Sbjct: 503 MVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKN--GNFPDAYTYGIMIDGYCKA 560
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EE + + E V ++ +AV +++ A C NG EA +L D M++ P
Sbjct: 561 NRVEEGEKLFQEMV--TMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTS- 617
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ + G G A ++ +M + SP+ + + LI CK G + + +
Sbjct: 618 ----ATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDS 673
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EMS V+P++ TY ++++ ++ + A +M G+ P+ YN L
Sbjct: 674 ILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFC 733
Query: 241 QVGMLDEAKSFFDIM-VKKLKMDDASYKFMM 270
+ G ++EA D+M + +DD +Y ++
Sbjct: 734 KEGKMEEALKVCDLMSTGGISLDDITYTTLI 764
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 9/194 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
+ VVY L+ + +G+ FRL ++++ + G+ Y SL+ G G+ + A +
Sbjct: 581 NAVVYGTLIRAYCENGNMREAFRLRDDMRSR--GIPQTSATYSSLIHGLSNIGLVDSANQ 638
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+E E S + V +++ C G+ + + M + P ++ ++
Sbjct: 639 LLDEMRKEGLSP--NVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKI-----TYT 691
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+M +G+C G K A ++ +M + PD +++N L + CK G + EA ++ MS
Sbjct: 692 IMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTG 751
Query: 189 GVNPDEYTYGLLMD 202
G++ D+ TY L+D
Sbjct: 752 GISLDDITYTTLID 765
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
F E+F + P + N L+ L K + + +++ M GV PD Y +
Sbjct: 143 FGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFST 202
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-K 258
+++A RVDD FRKM G+ PN+ YN ++ L + G LDEA F + M K +
Sbjct: 203 MVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKER 262
Query: 259 LKMDDASYKFMMKALSDGGKLDE 281
+K +Y ++ L + DE
Sbjct: 263 VKPSLVTYGVLINGLVKLERFDE 285
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 7/226 (3%)
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDT 159
F +LF + N K L +L + N + K + +VF M +PD
Sbjct: 143 FGVVFELFSLLAN-----KGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDV 197
Query: 160 LSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
F+ +++ C G + +A EL+ +M GV P+ TY ++ + R+D+ + K
Sbjct: 198 YLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEK 257
Query: 220 MVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
M ++P+L Y L+ LV++ DEA M + ++ Y ++ G
Sbjct: 258 MEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGN 317
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ L+I ++ +G S ++G K + E L+E+
Sbjct: 318 ISTALQIRDDMISNGISPNSVTCNSLIQG-YCKSNQMEHAEHLLEE 362
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSD 275
F + + GL P+L N L+ LV+ + + FDIM + D + M+ A
Sbjct: 150 FSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCT 209
Query: 276 GGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKEREKAEA 332
GG++D+ +E+ + G + G L K GR +E + EK E+E+ +
Sbjct: 210 GGRVDDAIELFRKMEKVGVAPNVVTYNNIIHG-LCKNGRLDEAFQFKEKMEKERVKP 265
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 137/284 (48%), Gaps = 9/284 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ Y+ L+ D ++ + +++E G+ D + + +++ + G E AME +
Sbjct: 49 ISYTTLLAALTMQKRFDSIYSIISQVEE--NGMNPDSIFFNAVINAFSESGNMESAMETF 106
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + +K + N+++ GK +E++KL + M E N + NL ++NV+
Sbjct: 107 WKM--QENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGN----VKPNLRTYNVL 160
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+C + R +A V KM PD +++N + + G L +AE + EM + GV
Sbjct: 161 VRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGV 220
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P+E T G++M + R+ + + +M + G+ PNL ++N L+ V + D
Sbjct: 221 QPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDE 280
Query: 251 FFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++M + +K D ++ +M A S G +++ EI ++ G
Sbjct: 281 VLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAG 324
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 109/249 (43%), Gaps = 11/249 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G+ D V Y ++ Y KG ++A E +N+ V+ + ++ C G+
Sbjct: 184 GIQPDVVTYNTIATAYAQKGALDQAEGVILEM--QNNGVQPNERTCGIIMSGYCKEGRIR 241
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EAL+ RMK P NL FN + G+ EV M E+ PD ++
Sbjct: 242 EALRFAYRMKELGIHP-----NLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVIT 296
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
F+ +++ G + + E++ +M G+ PD + Y +L + M+
Sbjct: 297 FSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMI 356
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDG---G 277
SG +PN+ ++ ++ G +D A FD M ++ + + +++ ++ ++
Sbjct: 357 KSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPW 416
Query: 278 KLDEILEIV 286
K +EIL+I+
Sbjct: 417 KAEEILQIM 425
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGV---FRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG 61
G + V+++ L+ GFV D DGV L EE GV D + + ++M + G
Sbjct: 254 GIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEF-----GVKPDVITFSTIMNAWSTAG 308
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E+ E +++ V + ++ A A + + + ++A +L M P
Sbjct: 309 FMEKCREIFDDMV--KAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQP---- 362
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N+ F + G+C G+ A+ VF KM + SP+ +F LI + +AEE+
Sbjct: 363 -NVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEI 421
Query: 182 YGEMSDKGVNPDEYTYGLLMDA 203
M++ V P++ T L+ +A
Sbjct: 422 LQIMTEFEVQPEKSTMLLVAEA 443
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 75/159 (47%), Gaps = 2/159 (1%)
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
+G+ ++A +F + E P +S+ L+ L + ++ + G+NPD
Sbjct: 26 KGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIF 85
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
+ +++A E ++ F KM ++G++P + YN L+ G +E+ ++M
Sbjct: 86 FNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMS 145
Query: 257 KK--LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
++ +K + +Y +++A + ++ E +V ++ G
Sbjct: 146 QEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASG 184
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 143/334 (42%), Gaps = 46/334 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M+ K D V ++ L+ F ++G D V L E++ E G + D + Y +++ G+
Sbjct: 327 MYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH--GCMPDVITYTTVINGF--- 381
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
C G DEA+ L M + P
Sbjct: 382 ----------------------------------CKEGLIDEAVMLLKNMPSCGCKP--- 404
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N S+ ++ G C R+ DA E+ +M + C P+ ++FN +I+ LCK G++ +A E
Sbjct: 405 --NTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIE 462
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M G NPD +Y ++D + + ++ M++ G+ PN+ Y+ + L
Sbjct: 463 LLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALA 522
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G +D+ FD I ++ D Y ++ +L + D ++ + ++ +G +
Sbjct: 523 REGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNES 582
Query: 300 ELQEFVKGELSKEGREEEVVKLMEKKEREKAEAK 333
+KG L+ EG E L+ + +A K
Sbjct: 583 TYTALIKG-LASEGLLCEAQDLLSELCSRRAVRK 615
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 139/335 (41%), Gaps = 58/335 (17%)
Query: 37 KEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAV------------GENSSVKMSA 84
K L G +D V Y +++KG + E +E V G ++M A
Sbjct: 211 KLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYA 270
Query: 85 VANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAI 144
+++D +C G + A ++ RM P L N+ +N + G C R++ A
Sbjct: 271 ----TIIDGICKEGHHEVANEILSRM-----PSYGLKPNVVCYNTVLKGICSADRWEKAE 321
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
E+ +M + C D ++FN L+D C+NG++ EL +M + G PD TY +++
Sbjct: 322 ELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGF 381
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYN----------------RLVGKLVQVGMLDEA 248
+ +D+ + M G +PN Y L+ +++Q G L
Sbjct: 382 CKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNP 441
Query: 249 KSFFDI--------------------MVKKLKMDDASYKFMMKALSDGGKLDEILEIVGG 288
+F I +V D SY ++ L GK +E LE++
Sbjct: 442 VTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELL-N 500
Query: 289 ILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
++ + GI + + L++EGR ++V+++ +
Sbjct: 501 VMINKGITPNVITYSSMAFALAREGRIDKVIQMFD 535
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 8/170 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+++ C G+ + A +L + PP N ++ + G CG+GR DA+ V
Sbjct: 88 NAMVAGYCRVGQVEAARRLAAAVPV---PP-----NAYTYFPVVRGLCGRGRIADALAVL 139
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M C P ++ +I+ C++G + A + + KG D L+++A +
Sbjct: 140 DEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQ 199
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK 257
VD+G RK+ G ++ YN ++ L + + D MVK
Sbjct: 200 GCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVK 249
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++ + V Y+ L+ ++ + + L L K G++ D + +L++G +
Sbjct: 324 MILRECSPNTVTYNTLISALCKENEIEAATDLARILVSK--GLLPDVCTFNTLIQGLCLS 381
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++ AME + E +N K + ++D+LC + EAL L M++
Sbjct: 382 KNQDIAMEMFEEM--KNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSG-----C 434
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A N +N + DG C R +DA E+F +M S ++++N LID LCKN + EA +
Sbjct: 435 ARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQ 494
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M +G+ PD++TY L+ V ++ + M +G P++ Y L+G L
Sbjct: 495 LMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLC 554
Query: 241 QVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKAL 273
+ G +D A + +K + + +Y +++AL
Sbjct: 555 RAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQAL 588
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 142/311 (45%), Gaps = 41/311 (13%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF D V ++ L+ GF R G+ + + + + EK G D Y SL+ G G
Sbjct: 257 EGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEK--GFDPDVYTYNSLISGMCKLGEF 314
Query: 64 EEAM---------ECYNEAVGENSSVKMSAVAN------------------------NSV 90
E+A+ EC V N+ + N N++
Sbjct: 315 EKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTL 374
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+ LC + D A+++F+ MKN+ P +++++ D C + R K+A+ + ++M
Sbjct: 375 IQGLCLSKNQDIAMEMFEEMKNKGCKPDEF-----TYSILIDSLCYERRLKEALMLLKEM 429
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
C+ + + +N LID LCK+ + +AEE++ +M GV+ TY L+D + RV
Sbjct: 430 ESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRV 489
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
++ + +M+ GL+P+ YN L+ +VG +++A M + D +Y +
Sbjct: 490 EEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTL 549
Query: 270 MKALSDGGKLD 280
+ L G++D
Sbjct: 550 IGGLCRAGRVD 560
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 142/325 (43%), Gaps = 15/325 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKL--GGVVSDGVVYGSLMKGYFMKGM 62
GF D Y+ + V D +L E L K+ G+V D + L+K
Sbjct: 118 GFKPDTNFYNIALNALVEDNK----LKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQ 173
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
A+ E N +K + +++ G + ALK MK + L
Sbjct: 174 LRPAILMLEEMA--NHGLKPDEITFTTLMQGFIEEGDLNGALK----MKKQMLGYGCLLT 227
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ S V+ +G+C +GR ++A+ ++ E SPD ++FN+L++ C+ G + +A ++
Sbjct: 228 NV-SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIV 286
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
M +KG +PD YTY L+ ++ + ++M+ PN YN L+ L +
Sbjct: 287 DFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKE 346
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
++ A I+V K L D ++ +++ L D +E+ + + G + E
Sbjct: 347 NEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEE-MKNKGCKPDEFT 405
Query: 302 QEFVKGELSKEGREEEVVKLMEKKE 326
+ L E R +E + L+++ E
Sbjct: 406 YSILIDSLCYERRLKEALMLLKEME 430
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 6/185 (3%)
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK-GVNPDEYTYG 198
F + +++ P+ +F LI E E L + ++ G PD Y
Sbjct: 71 FDSITTLLKQLKSSGSIPNATTFATLIQSFTN---FHEIENLLKILENELGFKPDTNFYN 127
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+ ++A E N++ KMV+ G+ +++ +N L+ L + L A + M
Sbjct: 128 IALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANH 187
Query: 259 -LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
LK D+ ++ +M+ + G L+ L++ +L G + + ++ V G KEGR EE
Sbjct: 188 GLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG-FCKEGRVEE 246
Query: 318 VVKLM 322
++ +
Sbjct: 247 ALRFV 251
>gi|125606474|gb|EAZ45510.1| hypothetical protein OsJ_30168 [Oryza sativa Japonica Group]
Length = 651
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 130/277 (46%), Gaps = 9/277 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y ++ +DG +FE + ++ G ++ +Y +L+ G E+EAM +
Sbjct: 379 YVLVIGALCKDGKPFEGMAVFERMLKR--GCAANAAIYTALIDSMGKFGREKEAMALFER 436
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
++S +K+ +V +++ LC GK DEA+ F + K +AVN + + D
Sbjct: 437 M--KDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQE-----KGIAVNAIFYTSLID 489
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G+ G + E+F +M PD+ +N LID L K+G + +A LY M D G +
Sbjct: 490 GFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQ 549
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
YTY +L+D F+ ++ ++ ++ M+D G+ P A + L L G A
Sbjct: 550 TVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRIL 609
Query: 253 DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGI 289
D + + + +++ M+ L G+ + ++ GI
Sbjct: 610 DELAPMGVIPETAHEDMINVLCKAGRFKQACKLADGI 646
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 13/327 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G ++Y+ L+ G V G D +F+ + + V D V Y L+KGY
Sbjct: 258 MRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTE-DQVRPDVVSYNILIKGYCRA 316
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE---HNPP 117
G +AM +E + E + + V +++ + G F + LF M+ ++ P
Sbjct: 317 GRAHDAMARLSE-MQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIP 375
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
+ ++ ++ C G+ + + VF +M + C+ + + LID + K G E
Sbjct: 376 QH------AYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKE 429
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
A L+ M D G+ D TYG++++ ++D+ FR + G+ N Y L+
Sbjct: 430 AMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLID 489
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE 296
+ GM+D++K F+ M+ K D Y ++ L+ G++D+ + + DDG +
Sbjct: 490 GFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQ 549
Query: 297 FSEELQEFVKGELSKEGREEEVVKLME 323
+ G L KE + EE +K +
Sbjct: 550 TVYTYTILIDG-LFKEHKNEEALKFWD 575
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 10/234 (4%)
Query: 52 SLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK 111
SL++ G+ EE + + + V+ S + N +LD L N G D A+ +FD M
Sbjct: 237 SLIRSLAALGLAEELLWAWKAM--RLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMS 294
Query: 112 NEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY-RCSPDTLSFNNLIDQLC 170
E ++ ++ S+N++ GYC GR DA+ +M E + +PD +++ L+
Sbjct: 295 TE----DQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHY 350
Query: 171 KNGMLAEAEELYGEMSDKGVNPD--EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
G L+ EM ++G+ D ++ Y L++ A + + +G F +M+ G N
Sbjct: 351 SEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAAN 410
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
A+Y L+ + + G EA + F+ M LK+D +Y ++ L GKLDE
Sbjct: 411 AAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDE 464
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 130/321 (40%), Gaps = 40/321 (12%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G PV Y+ ++ + G + L +++ E G V D V Y ++M G
Sbjct: 387 RGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED--GHVPDVVTYNTVMDGLCKSSRV 444
Query: 64 EEAMECYNEA--VG-----ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
EEA+ +NE +G + + + + S +D C GK DEA +L RM ++ +
Sbjct: 445 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHV 504
Query: 117 P------------------------------KRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
P ++ + + N + G C GR K+A EV
Sbjct: 505 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 564
Query: 147 FRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFE 206
M SPD +++N L+ C+ G A EL +M +G+ P+ TY L+ +
Sbjct: 565 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 624
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDAS 265
NR+ + F +M SG PNL Y L+ G +D F MV + D
Sbjct: 625 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 684
Query: 266 YKFMMKALSDGGKLDEILEIV 286
Y + L G+ LEI+
Sbjct: 685 YGTLAAELCKSGRSARALEIL 705
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 124/270 (45%), Gaps = 9/270 (3%)
Query: 16 LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVG 75
+++G + G D +++ E + + V L++G+ +G ++A E
Sbjct: 186 VLVGLMDSGRIDEALQVYRENRRE-----PCLVTLNVLLEGFCSRGQVDKARELLRAMPD 240
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPKRLAVNLGSFNVMADGY 134
E + V+ +VLD LC G+ +EA++LF DR + +L +N++ G
Sbjct: 241 EECAP--DEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGL 298
Query: 135 CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDE 194
C R +A+++F KM E SPD+ S+ LID L K G L +A L+ ++ GV P
Sbjct: 299 CQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPST 358
Query: 195 YTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
Y L+ N DD F M G P+ YN ++ + GML+EA
Sbjct: 359 VAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKK 418
Query: 255 MVKKLKMDD-ASYKFMMKALSDGGKLDEIL 283
M++ + D +Y +M L +++E L
Sbjct: 419 MIEDGHVPDVVTYNTVMDGLCKSSRVEEAL 448
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V + L+ GF G D L + ++ D V Y +++ G G EEA+ +
Sbjct: 213 VTLNVLLEGFCSRGQVDKARELLRAMPDE--ECAPDEVSYCTVLDGLCKAGRVEEAVRLF 270
Query: 71 NE----AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL-- 124
+ + +SS S N V+ LC N + DEA+++F++M + P + +
Sbjct: 271 GDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILI 330
Query: 125 ----------------------------GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
++ + G C F DA E+F M C
Sbjct: 331 DGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCP 390
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P +++N +ID CK GML EA +L +M + G PD TY +MD + +RV++
Sbjct: 391 PSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLL 450
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDG 276
F +M G PN +N ++ L Q +D+A ++ K+D+A ++K ++D
Sbjct: 451 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQA-------CQRGKLDEAFR--LLKRMTDD 501
Query: 277 GKLDEIL---EIVGGILDDGGIEFSEELQE 303
G + +++ ++ G+ ++ + L E
Sbjct: 502 GHVPDVVTYSTLISGLCSIARVDDARHLLE 531
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 145/372 (38%), Gaps = 70/372 (18%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF +G P++++ ++ G+ G + ++F L E+ D VY L+ K
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFS-LMEECHSPYPD--VYNVLIDS-LSK 56
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP--- 117
E EA++ + + + + ++L LC GK DEA + D M++ PP
Sbjct: 57 RQETEAVKKMVQVMVDRGCFP-DSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFA 115
Query: 118 ------KRLAV-----------------NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
L + N ++N++ C R DA+E+ R M E R
Sbjct: 116 TSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKR 175
Query: 155 CS--------------------------------PDTLSFNNLIDQLCKNGMLAEAEELY 182
P ++ N L++ C G + +A EL
Sbjct: 176 IPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELL 235
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF--RKM----VDSGLRPNLAVYNRLV 236
M D+ PDE +Y ++D + RV++ F R++ S P+L YN ++
Sbjct: 236 RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVI 295
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
L Q +DEA F+ M ++ + D SY ++ L+ GKL++ + +L G
Sbjct: 296 LGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVT 355
Query: 296 EFSEELQEFVKG 307
+ + G
Sbjct: 356 PSTVAYTSLIHG 367
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
SV+ CN G+ EA+K+F M+ H+P + +NV+ D + + ++
Sbjct: 14 TSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV------YNVLIDSLSKRQETEAVKKMV 67
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ M + C PD+ +F ++ LCK G + EAE + EM + + P T L
Sbjct: 68 QVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLR 127
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASY 266
++ M + N + YN +V L + +D+A M K++ + S
Sbjct: 128 GSMERAFQLLEIMPVA----NSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSL 183
Query: 267 KFMMKALSDGGKLDEILEI----------------VGGILDDGGIEFSEELQEFVKGE-- 308
++ L D G++DE L++ + G G ++ + EL + E
Sbjct: 184 DSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEEC 243
Query: 309 -------------LSKEGREEEVVKLMEKKE 326
L K GR EE V+L +E
Sbjct: 244 APDEVSYCTVLDGLCKAGRVEEAVRLFGDRE 274
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 5/204 (2%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F + G+C GR +A+++F M E SP +N LID L K +++ M
Sbjct: 13 FTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQETEAVKKMVQVMV 71
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
D+G PD +T+ ++ + ++D+ +M + P A + L +L G ++
Sbjct: 72 DRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSME 131
Query: 247 EAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A +IM + ++Y ++ AL ++D+ LE+ + + I + + V
Sbjct: 132 RAFQLLEIMPVA---NSSAYNIVVVALCKAARVDDALEL-ARTMSEKRIPLAAGSLDSVL 187
Query: 307 GELSKEGREEEVVKLMEKKEREKA 330
L GR +E +++ + RE
Sbjct: 188 VGLMDSGRIDEALQVYRENRREPC 211
>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 706
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 148/328 (45%), Gaps = 30/328 (9%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G +VY+ ++ F G LF + K D Y +++KG E
Sbjct: 255 GCTPGAIVYNEIISCFAELGRVKEALHLFSCMPCK-----PDIFSYNAVLKGLCRAERWE 309
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E E V ++ S V N+V+ LC+ G D AL++ D+M P
Sbjct: 310 DAGELITEMVRKDCSP--DEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNF---- 363
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++ + + + QG +DA+E+ R M CSP+T+ + +++ LC++G + +L GE
Sbjct: 364 -TYSALINAFSEQGCVEDALELLRSMP---CSPNTVCYKSVLKGLCRDGQWEDVGQLIGE 419
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M PDE +GL++D + VD G +++ + G P++ +Y L+ + G
Sbjct: 420 MVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGR 479
Query: 245 LDEAKSFFDIMVKKLKMDDASYKFMMKALS------DGGKLDEILEIVGGILDDGGIEFS 298
+D++ F M K + +Y +++ L D GKL I E+VG + FS
Sbjct: 480 VDDSLKLFKSMT--CKPNTVTYNYVLMGLCKVELWEDAGKL--IDEMVGQECPPNEMTFS 535
Query: 299 EELQEFVKGELSKEGREEEVVKLMEKKE 326
+ L ++G E + + EK +
Sbjct: 536 -----ILISSLCQKGLVECAIDVFEKMQ 558
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 14/243 (5%)
Query: 45 SDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
D + +G L+ + G+ + AM + A+ N ++ G+ EAL
Sbjct: 223 PDDLTFGMLIHSFCQSGLVDRAMGILDRM--SKCGCTPGAIVYNEIISCFAELGRVKEAL 280
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
LF M + + + S+N + G C R++DA E+ +M CSPD ++FN
Sbjct: 281 HLFSCMPCKPD--------IFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNT 332
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
+I LC G++ A E+ +M G PD +TY L++A E V+D R M S
Sbjct: 333 VISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMPCS- 391
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEIL 283
PN Y ++ L + G ++ MV+ D+ + ++ L G +D L
Sbjct: 392 --PNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGL 449
Query: 284 EIV 286
E++
Sbjct: 450 EVL 452
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 24/268 (8%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLM-KGYFMKGMEEEAMECYNEAVGENS 78
F+R GD D +L + E VV +L+ K G +A E V S
Sbjct: 71 FIRLGDLDAALQLVGSMSEP------PAVVPCTLLIKKLCAAGRLADA-----EGVLRAS 119
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQG 138
AV +N+++ C G+ +A ++ + A ++ ++N + GYC G
Sbjct: 120 EAA-DAVDHNTLVAGYCRAGRLADAERMLRSLAASG------AADVVTYNTLIAGYCRGG 172
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
R +DA + M +P++ ++N L+ LC +AEEL EM+ PD+ T+G
Sbjct: 173 RLEDARLLVASMPP---APNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFG 229
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+L+ + + VD +M G P VYN ++ ++G + EA F M
Sbjct: 230 MLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCM--P 287
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIV 286
K D SY ++K L + ++ E++
Sbjct: 288 CKPDIFSYNAVLKGLCRAERWEDAGELI 315
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 134/317 (42%), Gaps = 36/317 (11%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D YS L+ F G + L + + V Y S++KG G E+
Sbjct: 360 PDNFTYSALINAFSEQGCVEDALELLRSMP-----CSPNTVCYKSVLKGLCRDGQWEDVG 414
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E V + + + ++D LC G D L++ + N P ++ +
Sbjct: 415 QLIGEMVRNDCAP--DEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSP-----DVVMY 467
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ +G+ GR D++++F+ M C P+T+++N ++ LCK + +A +L EM
Sbjct: 468 TSLLNGFAEYGRVDDSLKLFKSM---TCKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVG 524
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+ P+E T+ +L+ + + V+ F KM G PN+ +Y+ L L + G +D
Sbjct: 525 QECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDN 584
Query: 248 AKSFFDIMVKKLKMDDASYKFMMKALS------DGGKL-----------DEIL--EIVGG 288
A + M K D Y +K L D G+L DE+ I+
Sbjct: 585 ALKLLNNM--SCKADTICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITN 642
Query: 289 ILDDGGIEFSEELQEFV 305
+ G +E++ E+ + +
Sbjct: 643 LCQQGFVEYATEVSDLM 659
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 44/280 (15%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D +V+ ++ + G D + +E+ G D V+Y SL+ G+ G ++++
Sbjct: 427 PDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNY--GCSPDVVMYTSLLNGFAEYGRVDDSL 484
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ + ++ + K + V N VL LC +++A KL D M + PP + +F
Sbjct: 485 KLF-----KSMTCKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEM-----TF 534
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSP------------------------------ 157
+++ C +G + AI+VF KM Y C+P
Sbjct: 535 SILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNNMSC 594
Query: 158 --DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
DT+ +++ + LC+ + +A EL EM K PDE T+ +++ + V+
Sbjct: 595 KADTICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATE 654
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
M+ PN+ +Y+ L+ + G L++A M
Sbjct: 655 VSDLMLKYECTPNIVIYSSLINGFSEHGHLEDALKLLRSM 694
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ A ++ LM FV++G+ +F+ + + + V + +LM GY G +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK--WSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E N + S V+ + +++ LC K D+A +LFD M + P N
Sbjct: 189 EGFRLKNAM--QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVP-----NG 241
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+F + DG+C GR A+E++++M S D +++N LI LCK G L +A++L E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
MS KG+ PD+ TY L+D + ++ Y ++M+ +R + Y L+ L Q G
Sbjct: 302 MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 245 -LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGG 277
+D K +++ LK + +Y ++ G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 9/231 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D YS L+ G ++ D LF+E+ + G+V +GV + +L+ G+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLD--NGLVPNGVTFTTLIDGHCKN 254
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + AME Y + + ++ S + + N+++ LC G +A L D M + P ++
Sbjct: 255 GRVDLAMEIYKQMLSQSLSADL--ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + DG C +G + A E ++M + D +++ LI LC+ G +AE+
Sbjct: 313 -----TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
+ EM G+ P+ TY ++++ + V G+ ++M G P++
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 100/252 (39%), Gaps = 15/252 (5%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV-------------N 123
NS+ + + + +++ LC + EA L + + AV +
Sbjct: 6 NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ F+ + Y G +DAIE +R E++ + +++ L K Y
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
E + G Y + +LM + + + + F + LRP++ +N L+ +++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
LDE + M ++ D +Y ++ L K+D+ E+ +LD+G +
Sbjct: 186 DLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 303 EFVKGELSKEGR 314
+ G K GR
Sbjct: 246 TLIDGH-CKNGR 256
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 137/292 (46%), Gaps = 18/292 (6%)
Query: 8 ADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+P VY+Y +L F + G + F+E++ G ++ V Y +L+ Y +
Sbjct: 319 VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSI--GCSANVVTYTALLHAYLKAKQLPQ 376
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN-----------EH 114
A + +N + ++ + + ++++D LC G+ +A +++ ++ E
Sbjct: 377 ASDIFNRMI--DAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEG 434
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
+A N+ ++ + DG C + DA E+ M C P+ + ++ LID CK G
Sbjct: 435 KHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGK 494
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+ A+E++ MS G P +TY L+DA F+ R+D +MV+S PN+ Y
Sbjct: 495 IDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTA 554
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
++ L ++G +A +M +K + +Y ++ L GK+D L++
Sbjct: 555 MIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQL 606
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 120/300 (40%), Gaps = 56/300 (18%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G A+ V Y+ L+ +++ +F + + G + + Y +L+ G G +
Sbjct: 353 GCSANVVTYTALLHAYLKAKQLPQASDIFNRMID--AGCPPNTITYSALVDGLCKAGEIQ 410
Query: 65 EAMECYNEAVG--------------ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM 110
+A E Y + +G S+ + V +++D LC K +A +L D M
Sbjct: 411 KACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAM 470
Query: 111 KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG------------------- 151
+ P + ++ + DG+C G+ +A EVF +M
Sbjct: 471 LSNGCEPNHII-----YDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMF 525
Query: 152 ----------------EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
E C+P+ +++ +ID LC+ G +A +L M +KG +P+
Sbjct: 526 KDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVV 585
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
TY L+D + +VD F +M G PN Y L+ G+LDEA S M
Sbjct: 586 TYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM 645
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 135/335 (40%), Gaps = 44/335 (13%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
F D V+ + ++ G + D ++ + + V Y +L+ G+ K
Sbjct: 103 FKLDTVLCTQMISGLMEASLFDEAISFLHRMR--CNSCIPNVVTYRTLLTGFLKKKQLGW 160
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN-- 123
N + E + S NS++ + CN + A KL RM + PP +A N
Sbjct: 161 CKRIINMMMKEGCNPNPSLF--NSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIF 218
Query: 124 --------------------------LGSFNVM--------ADGYCGQGRFKDAIEVFRK 149
L S V+ A CG G+F A ++ +
Sbjct: 219 IGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKV 278
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M PDT +++ +I LC+ + +A L+ EM GVNPD YTY +L+D+ +
Sbjct: 279 MMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGL 338
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKF 268
++ ++F +M G N+ Y L+ ++ L +A F+ M+ + +Y
Sbjct: 339 IEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSA 398
Query: 269 MMKALSDGGKLDEILEI---VGGILDDGGIEFSEE 300
++ L G++ + E+ + G D+ G +F E
Sbjct: 399 LVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFE 433
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 138/330 (41%), Gaps = 46/330 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + ++Y L+ GF + G D +F L+ G + Y SL+ F
Sbjct: 470 MLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVF--LRMSKCGYLPTVHTYTSLIDAMFKD 527
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ AM+ ++ V SS + V +++D LC G+ +ALKL M+ + P
Sbjct: 528 RRLDLAMKVLSQMV--ESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSP--- 582
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ + DG G+ ++++F +M C+P+ +++ LI+ C G+L EA
Sbjct: 583 --NVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHS 640
Query: 181 LYGEMSD---------------------------------KGVNPDEYTYGLLMDACFEV 207
L EM G P YGLL+D +
Sbjct: 641 LLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKA 700
Query: 208 NRVDDGATYFRKMVDSGLRPNLA---VYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA 264
R+++ ++M++ N+ +Y L+ L L++A + + +K + +
Sbjct: 701 GRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPEL 760
Query: 265 S-YKFMMKALSDGGKLDEILEIVGGILDDG 293
S + ++K L K +E L++ I D+G
Sbjct: 761 SVFVCLIKGLIKVNKWNEALQLCYSICDEG 790
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 140/392 (35%), Gaps = 80/392 (20%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+ Y+ L+ G D FR+ +E+ E G D G + +G
Sbjct: 35 GYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE--SGFCMDKFTVGCFAQALCKEGRWS 92
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP------- 117
+A+ + E K+ V ++ L FDEA+ RM+ P
Sbjct: 93 DAL-----VMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRT 147
Query: 118 --------------KRLA---------VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
KR+ N FN + YC + A ++ ++M +
Sbjct: 148 LLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCG 207
Query: 155 CSPDTLSFNNLIDQLC------KNGMLAEAEELYGE------------------------ 184
C P +++N I +C +LA AE++Y E
Sbjct: 208 CPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMG 267
Query: 185 -----------MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
M KG PD TY ++ E +V+ F++M G+ P++ Y
Sbjct: 268 KFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYT 327
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
L+ + G++++A+S+FD M + +Y ++ A +L + +I ++D
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDA 387
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
G + V G L K G ++ ++ K
Sbjct: 388 GCPPNTITYSALVDG-LCKAGEIQKACEVYTK 418
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 35/246 (14%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ G R G+ +L ++EK G + V Y +L+ G G + +++ +
Sbjct: 550 VTYTAMIDGLCRIGECQKALKLLSMMEEK--GCSPNVVTYTALIDGLGKSGKVDLSLQLF 607
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP-------------P 117
+ + + + V +++ C G DEA L MK + P
Sbjct: 608 IQMSTKGCAP--NYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFS 665
Query: 118 KRLAVNLG---------------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS- 161
K+ +LG + ++ D + GR ++A+E+ ++M E S + S
Sbjct: 666 KKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSK 725
Query: 162 --FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK 219
+ +LI LC L +A ELY E++ KGV P+ + L+ +VN+ ++
Sbjct: 726 DMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYS 785
Query: 220 MVDSGL 225
+ D G+
Sbjct: 786 ICDEGV 791
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 153/326 (46%), Gaps = 17/326 (5%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF + YS L+ + V L ++ + + ++ +LMK ++ +
Sbjct: 86 KGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHEN--IFLNLMKHFYKSSLH 143
Query: 64 EEAMECY---NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
E +E + V E S+K A ++ L+ L + + D A K + NEH ++
Sbjct: 144 ERVLEMFYAIQPIVREKPSLK----AISTCLNILVESKQIDLAQKCLLYV-NEH---LKV 195
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-PDTLSFNNLIDQLCKNGMLAEAE 179
N FN++ +C G + A+EV +M + R S P+ ++++ LID LC NG L EA
Sbjct: 196 RPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAI 255
Query: 180 ELYGEMSDK-GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EL+ EM K + PD TY +L+ + D M +G PN+ Y+ L+
Sbjct: 256 ELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNG 315
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
+ G L+EAK FD M LK D Y ++ G++DE +E++ + +
Sbjct: 316 FCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKAD 375
Query: 298 SEELQEFVKGELSKEGREEEVVKLME 323
+ +KG L +EGR +E ++++E
Sbjct: 376 AVTFNVLLKG-LCREGRFDEALRMLE 400
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 129/254 (50%), Gaps = 6/254 (2%)
Query: 43 VVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDE 102
V + ++ L+K + G E A+E +E S + + ++++D LC NG+ E
Sbjct: 195 VRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYP-NVITYSTLIDGLCGNGRLKE 253
Query: 103 ALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF 162
A++LF+ M ++ ++ + +++V+ G+C G+ A ++ M C P+ ++
Sbjct: 254 AIELFEEMVSK----DQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNY 309
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
+ L++ CK G L EA+E++ EM G+ PD Y L++ V R+D+ ++M +
Sbjct: 310 SVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTE 369
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ + +N L+ L + G DEA ++ + + ++ SY+ ++ L G+L++
Sbjct: 370 MKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEK 429
Query: 282 ILEIVGGILDDGGI 295
++G +L G +
Sbjct: 430 SCALLGLMLSRGFV 443
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 139/286 (48%), Gaps = 17/286 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA---M 67
+ YS L+ G +G LFEE+ K ++ D + Y L+KG+ G + A M
Sbjct: 236 ITYSTLIDGLCGNGRLKEAIELFEEMVSK-DQILPDALTYSVLIKGFCHGGKADRARKIM 294
Query: 68 ECYNEAVGENSSVKMSAVANNSVL-DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
E + + G + +V N SVL + C G+ +EA ++FD MK+ P +
Sbjct: 295 E-FMRSNGCDPNV-----FNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVG----- 343
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+ + + +CG GR +A+E+ ++M E +C D ++FN L+ LC+ G EA + ++
Sbjct: 344 YTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLA 403
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+GV ++ +Y ++++ + ++ M+ G P+ A N L+ L + GM+D
Sbjct: 404 YEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVD 463
Query: 247 EA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
A + F + + S+ +++ + KL + E+V +++
Sbjct: 464 NAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFELVDELVE 509
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 9/230 (3%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+ D + YS L+ GF G +D ++ E ++ G + Y LM G+ +G EEA
Sbjct: 268 LPDALTYSVLIKGFCHGGKADRARKIMEFMRS--NGCDPNVFNYSVLMNGFCKEGRLEEA 325
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
E ++E ++S +K V ++++ C G+ DEA++L M + + +
Sbjct: 326 KEVFDEM--KSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTE-----MKCKADAVT 378
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
FNV+ G C +GRF +A+ + + + S+ +++ LC+ G L ++ L G M
Sbjct: 379 FNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLML 438
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+G P T L+ E VD+ T + G P + L+
Sbjct: 439 SRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLI 488
>gi|125541439|gb|EAY87834.1| hypothetical protein OsI_09254 [Oryza sativa Indica Group]
Length = 502
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 145/313 (46%), Gaps = 11/313 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ R + + ++E GV D V Y SL+ G +G+
Sbjct: 42 GLPPDVVTYNTLLAAHCRAAGLEAGLAVMGRMRE--AGVEPDAVTYNSLIAGAARRGLPI 99
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A++ ++E + + + + + N ++ L +G ++A ++F M K +A
Sbjct: 100 HALDLFDEML--RAGIAPDSWSYNPLMHCLFRSGHPEDAYRVFADMAE-----KGIAPCD 152
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + DG G +A +FR + +++N +I+ LC +G + A + E
Sbjct: 153 TTYNTLLDGMFRAGYAMNAYRMFRYLQRAGLPVSIVTYNTMINGLCSSGKVGYARMVLRE 212
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ P+ TY +M CF+ R + G F ++D G ++ Y ++ LV+ G
Sbjct: 213 LGRTDHAPNIITYTAVMKCCFKYGRFEQGLDTFLSLLDRGYISDVYPYCTVISALVKKGR 272
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L EA ++ D+M++ ++D Y ++ GKLD+ E+V +++DGG+E E
Sbjct: 273 LGEANNYCDLMLQNGSRLDSVCYNTLIHMRCQEGKLDDAFELV-SMMEDGGLESDEYTFA 331
Query: 304 FVKGELSKEGREE 316
+ L K G E
Sbjct: 332 ILVNGLCKMGHIE 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 130/314 (41%), Gaps = 49/314 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ LM R G + +R+F ++ EK G+ Y +L+ G F
Sbjct: 108 MLRAGIAPDSWSYNPLMHCLFRSGHPEDAYRVFADMAEK--GIAPCDTTYNTLLDGMFRA 165
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKR 119
G A + + + + +S V N++++ LC++GK A + + + +H P
Sbjct: 166 GYAMNAYRMFRYL--QRAGLPVSIVTYNTMINGLCSSGKVGYARMVLRELGRTDHAP--- 220
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFR-------------------------KMGEYR 154
N+ ++ + GRF+ ++ F ++GE
Sbjct: 221 ---NIITYTAVMKCCFKYGRFEQGLDTFLSLLDRGYISDVYPYCTVISALVKKGRLGEAN 277
Query: 155 --C--------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
C D++ +N LI C+ G L +A EL M D G+ DEYT+ +L++
Sbjct: 278 NYCDLMLQNGSRLDSVCYNTLIHMRCQEGKLDDAFELVSMMEDGGLESDEYTFAILVNGL 337
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA 264
++ ++ M G++ N+ YN LV L + +D A M KLK DD
Sbjct: 338 CKMGHIEAAEKQLFYMEIKGMQSNVVAYNCLVDALCKFQEVDAAIRLLQCM--KLK-DDF 394
Query: 265 SYKFMMKALSDGGK 278
+Y ++ L G+
Sbjct: 395 TYTSLVHGLCRVGR 408
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
G R T N + LC+ G LA AE + + G+ PD TY L+ A +
Sbjct: 4 GRGRWLLPTRLLNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGL 63
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+ G +M ++G+ P+ YN L+ + G+ A FD M++ + D SY +
Sbjct: 64 EAGLAVMGRMREAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRAGIAPDSWSYNPL 123
Query: 270 MKALSDGGKLDEILEIVGGILDDG 293
M L G ++ + + + G
Sbjct: 124 MHCLFRSGHPEDAYRVFADMAEKG 147
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 7/162 (4%)
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P RL NV C G A V PD +++N L+ C+ L
Sbjct: 11 PTRL------LNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLE 64
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+ G M + GV PD TY L+ F +M+ +G+ P+ YN L+
Sbjct: 65 AGLAVMGRMREAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRAGIAPDSWSYNPLM 124
Query: 237 GKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGG 277
L + G ++A + F D+ K + D +Y ++ + G
Sbjct: 125 HCLFRSGHPEDAYRVFADMAEKGIAPCDTTYNTLLDGMFRAG 166
>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 14/316 (4%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGV-VSDGV-VYGSLMKGYFMKGMEEEA 66
+ V Y+ L+ GF + G + EEL+ ++ + + V Y ++++GY G EEA
Sbjct: 310 NSVTYNSLIDGFCKIGG----ITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEA 365
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ +E V + ++V NS++ L G D A +F M ++ P + +
Sbjct: 366 LRLCDEMV--ERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKF-----T 418
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+++ G C G A++ ++ E D S N LI+ LCK+ A A +L M
Sbjct: 419 CSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMY 478
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
+G+ PD T+G L+D + ++ + KMV +PNL VYN ++ L + G++D
Sbjct: 479 VRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVD 538
Query: 247 EAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
A+S D++ + +D +Y ++ + GK D+ ++ ++ + GI S V
Sbjct: 539 VARSLVDVLQRMGLVDTITYNTLINGYFNCGKFDKAFKL-STLMQNAGILASSATYNTVI 597
Query: 307 GELSKEGREEEVVKLM 322
L K G +E +LM
Sbjct: 598 KFLCKFGCVQEAKELM 613
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 144/286 (50%), Gaps = 11/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + VVY+ +M +GD DG +F ++ +K + D L +G
Sbjct: 372 MVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDK--QIPLDKFTCSILTRGLCRN 429
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A++ N+ + EN+ ++ A ++N +++ LC + F A +L RM + L
Sbjct: 430 GYITTALKFLNQVL-ENNLIE-DAFSHNILINFLCKSNNFAAARQLLARMY-----VRGL 482
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +F + DG+C +G + A++V+ KM + P+ L +N++I+ LCK+G++ A
Sbjct: 483 VPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARS 542
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L + G+ D TY L++ F + D M ++G+ + A YN ++ L
Sbjct: 543 LVDVLQRMGL-VDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLC 601
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+ G + EAK +MV + D+ +Y+ ++ ++ +E++E+
Sbjct: 602 KFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIEL 647
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N V+ ALC + K EAL +F R+ P N+ +FN+M DG C G A+++
Sbjct: 242 NVVVHALCKDCKLQEALSVFYRILKSGIWP-----NVVTFNMMVDGACKMGDMDLALKLV 296
Query: 148 RKM-----GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
RKM G + P+++++N+LID CK G + AEEL EM + P+ TY +++
Sbjct: 297 RKMEIMSAGSIK--PNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIE 354
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKM 261
+++ +MV+ GL PN VYN ++ L G +D A F D+ K++ +
Sbjct: 355 GYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPL 414
Query: 262 DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIE--FSEEL 301
D + + + L G + L+ + +L++ IE FS +
Sbjct: 415 DKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNI 456
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 10/201 (4%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAV-GENSSVKMSAVANNSVLDALCNNGKF 100
G+V D V +G+L+ G+ +G E A++ Y++ V GE K + + NS+++ LC +G
Sbjct: 481 GLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEE---KPNLLVYNSIINGLCKDGLV 537
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
D A L D ++ + V+ ++N + +GY G+F A ++ M +
Sbjct: 538 DVARSLVDVLQ------RMGLVDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSA 591
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
++N +I LCK G + EA+EL M GV PD TY L+ + ++ M
Sbjct: 592 TYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYM 651
Query: 221 VDSGLRPNLAVYNRLVGKLVQ 241
V G+ P+ Y +V L+Q
Sbjct: 652 VLKGVVPDKLTYENIVSPLLQ 672
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 25/255 (9%)
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK--NEHNPP 117
+ + +E YN VGE SV S + SV+ L N+ ++D+AL L + N +P
Sbjct: 93 RNTPQLVLEFYN-WVGEKKSVLHSLEISCSVIHVLVNSRRYDDALSLMGNLMTVNGLSPL 151
Query: 118 KRLAVNLGSFNVMADGY---------CGQ-GRFKDAIEVFRKMGEYRCSPDTLSFNNLID 167
+ L S+ + + C Q G A EV +K+ C ++NN +
Sbjct: 152 EVLEALNNSYGICESNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLS 211
Query: 168 QLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
L K + +Y EM G + T+ +++ A + ++ + + F +++ SG+ P
Sbjct: 212 HLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWP 271
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
N+ +N +V ++G +D A +V+K++ +M A S ++
Sbjct: 272 NVVTFNMMVDGACKMGDMDLALK----LVRKME--------IMSAGSIKPNSVTYNSLID 319
Query: 288 GILDDGGIEFSEELQ 302
G GGI +EEL+
Sbjct: 320 GFCKIGGITVAEELR 334
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 122/250 (48%), Gaps = 9/250 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KGF V Y+ L+ F R+G D + + E + +K G+ + Y ++
Sbjct: 372 KGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDK--GLSMNLEGYNGMICAVCKDRRM 429
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++AM E ++ K N+++ LCNN + +EA LF+ + +E + N
Sbjct: 430 DDAMRFMQEM--KSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHE-----GVVAN 482
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N + G ++DAI + M + CS D +S+N LI LC++G + + L
Sbjct: 483 AITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLS 542
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM++KG+ P+ +Y LL+ + RV D ++M++ L P++ YN L+ L ++G
Sbjct: 543 EMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMG 602
Query: 244 MLDEAKSFFD 253
+ A + +
Sbjct: 603 WMHAALNLLE 612
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 115/238 (48%), Gaps = 9/238 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G+ D Y+ ++ + + LFE L + GVV++ + Y +L+ G
Sbjct: 442 QGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHE--GVVANAITYNTLIHALLRNGSW 499
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A+ N+ V S+ + V+ N ++ ALC +G D ++ L M + P +
Sbjct: 500 QDAISLANDMVLHGCSLDI--VSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNV--- 554
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
S+N++ C R +DA+E+ ++M +PD +++N LI+ LCK G + A L
Sbjct: 555 --SYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLE 612
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
++ ++ V+ D TY +L+ + + D + + V SG+ PN + +V V+
Sbjct: 613 KLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 157/367 (42%), Gaps = 60/367 (16%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF+ G AD ++ ++ G G RL + + + G V + + YG L+KG +
Sbjct: 233 MFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIR--GCVPNAITYGFLLKGLCLA 290
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EEA V E + V + V +LD GK EA +L++ M ++ PP
Sbjct: 291 SQVEEARTMLGR-VPELNVVLFNTVIGRCLLD-----GKLKEAAELYETMGSKGCPP--- 341
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +++++ G C GR A+++ R+M + +P +++ L+ C+NGM
Sbjct: 342 --DAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRA 399
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ MSDKG++ + Y ++ A + R+DD + ++M G +P++ YN ++ L
Sbjct: 400 MLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLC 459
Query: 241 QVGMLDEAKSFF------------------------------------DIMVKKLKMDDA 264
++EA+ F D+++ +D
Sbjct: 460 NNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIV 519
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVKG-------ELSKEG 313
SY ++KAL G +D + ++ + + G + ++ + E K ELSKE
Sbjct: 520 SYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEM 579
Query: 314 REEEVVK 320
+E+
Sbjct: 580 LNQELTP 586
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 132/330 (40%), Gaps = 32/330 (9%)
Query: 19 GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENS 78
R G +D + + G V D V+Y +++ +G EA +E
Sbjct: 181 ALCRLGRADEALTMLRSMARH--GCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGC 238
Query: 79 SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA----------------- 121
S ++ N ++ LC G+ EA +L DRM P +
Sbjct: 239 SADVNTF--NDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEA 296
Query: 122 ---------VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
+N+ FN + G+ K+A E++ MG C PD +++ LI LCK
Sbjct: 297 RTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKL 356
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
G L A +L EM DKG P TY +L+ + D+ M D GL NL Y
Sbjct: 357 GRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGY 416
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
N ++ + + +D+A F M + K D +Y ++ L + +++E + +L
Sbjct: 417 NGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLH 476
Query: 292 DGGIEFSEELQEFVKGELSKEGREEEVVKL 321
+G + + + L + G ++ + L
Sbjct: 477 EGVVANAITYNTLIHA-LLRNGSWQDAISL 505
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 108/241 (44%), Gaps = 9/241 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ ++ +D D R +E+K + G D Y +++ EEA +
Sbjct: 416 YNGMICAVCKDRRMDDAMRFMQEMKSQ--GYKPDICTYNTIIYHLCNNNQMEEAEYLFEN 473
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ E V +A+ N+++ AL NG + +A+ L + M ++++ S+N +
Sbjct: 474 LLHE--GVVANAITYNTLIHALLRNGSWQDAISLANDMVLH-----GCSLDIVSYNGLIK 526
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
C G +I + +M E P+ +S+N LI +LCK + +A EL EM ++ + P
Sbjct: 527 ALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTP 586
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
D TY L++ ++ + K+ + + ++ YN L+ + +L +A
Sbjct: 587 DIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLL 646
Query: 253 D 253
+
Sbjct: 647 N 647
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 106/260 (40%), Gaps = 50/260 (19%)
Query: 88 NSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEV 146
N+VL A + L L+ RM + PP +F++ A C GR +A+ +
Sbjct: 140 NTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTF-----TFSIAARALCRLGRADEALTM 194
Query: 147 FRKMGEYRCSPDTL-----------------------------------SFNNLIDQLCK 171
R M + C PDT+ +FN+++ LC
Sbjct: 195 LRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCT 254
Query: 172 NGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAV 231
G L EA L M +G P+ TYG L+ ++V++ T ++ + N+ +
Sbjct: 255 LGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPEL----NVVL 310
Query: 232 YNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
+N ++G+ + G L EA ++ M K D +Y ++ L G+L ++++ +
Sbjct: 311 FNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREME 370
Query: 291 DDGG----IEFSEELQEFVK 306
D G + ++ L F +
Sbjct: 371 DKGFAPSIVTYTILLHSFCR 390
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 134/284 (47%), Gaps = 11/284 (3%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V++ L+ R G D L ++ K G+ D V Y SL+ GYF +G + A+
Sbjct: 567 VIFDILLNNLKRVGRMDEARSLIIDMYSK--GIDPDIVNYASLIDGYFKEGNQLAALSIV 624
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
E +N ++ VA N+++ L GK+D R LA + ++N +
Sbjct: 625 QEMKEKN--IRFDVVAYNALIKGLLRLGKYDP------RYVCSRMIELGLAPDCITYNTI 676
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
+ YC +G+ +DA+++ +M Y P+ +++N LI LCK G + +AE EM
Sbjct: 677 INTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEF 736
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
P T+ L+ A + D K+V SGL +L VYN L+ ++GM +AK
Sbjct: 737 VPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKV 796
Query: 251 FFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
D MVK+ + D +Y +++ G +++ L+ + DG
Sbjct: 797 VLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG 840
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 132/267 (49%), Gaps = 10/267 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + G + D V S ++ GF R G LF E+ E G+ + V Y +++ F
Sbjct: 347 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEM--GLDPNHVSYATIINSLFKS 404
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA ++ V S + V +V+D L GK EA ++F+ + + L
Sbjct: 405 GRVMEAFNLQSQMVVRGISFDI--VTCTTVMDGLFKVGKTKEAEEVFETILKLN-----L 457
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A N +++ + DGYC G+ + A V +KM + P+ ++F+++I+ K GML++A +
Sbjct: 458 APNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVD 517
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ EM + V P+ Y +L+D F+ D + ++M L + +++ L+ L
Sbjct: 518 VLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLK 577
Query: 241 QVGMLDEAKSF-FDIMVKKLKMDDASY 266
+VG +DEA+S D+ K + D +Y
Sbjct: 578 RVGRMDEARSLIIDMYSKGIDPDIVNY 604
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 20/301 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D + + L+ G+ R G + L + GGV D + +L+ GY
Sbjct: 188 MVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVD--GGVTKDVIGLNTLIDGYCEA 245
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF----------DRM 110
G+ +A E + S VK+ V N++L A C G A LF DR+
Sbjct: 246 GLMSQATELIENS--WRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRL 303
Query: 111 KN----EHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
KN N K L L ++ + YC +++ +++KM PD ++ ++++
Sbjct: 304 KNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSIL 363
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLR 226
C++G L EA L+ EM + G++P+ +Y ++++ F+ RV + +MV G+
Sbjct: 364 YGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGIS 423
Query: 227 PNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEILEI 285
++ ++ L +VG EA+ F+ ++K L + +Y ++ GK+ E+ E+
Sbjct: 424 FDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKM-ELAEL 482
Query: 286 V 286
V
Sbjct: 483 V 483
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + + V Y+ L+ G + G + +E+ + V + + L+K Y +
Sbjct: 700 GIMPNAVTYNILIGGLCKTGAVEKAESALDEML--VMEFVPTPITHKFLVKAYSRSEKAD 757
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ ++ + + V S +++S N+++ C G +A + D M + ++ +L
Sbjct: 758 KILQIHEKLVA--SGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVK-----RGISADL 810
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE----E 180
++N + GYC + A++ + +M +P+ ++N L+ L G++ E +
Sbjct: 811 VTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEK 870
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM+++G+ P+ TY +L+ V +M+ G P L YN L+
Sbjct: 871 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 930
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA 264
+ G + EA+ + ++ K ++ ++
Sbjct: 931 KSGKMIEARELLNDLLTKGRIPNS 954
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 36/233 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE------------------KLG- 41
M V FV P+ + +L+ + R +D + ++ E+L +LG
Sbjct: 731 MLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGM 790
Query: 42 --------------GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
G+ +D V Y +L++GY E+A++ Y++ + + ++
Sbjct: 791 TRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTY-- 848
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N++L L N G +E ++ +++ +E N + L N +++++ GY G K I +
Sbjct: 849 NTLLGGLSNAGLMEEMMEETEKLVSEMNE-RGLVPNAATYDILVSGYGRVGNRKKTIILH 907
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
+M P ++N LI K+G + EA EL ++ KG P+ +TY +L
Sbjct: 908 IEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 960
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 127/322 (39%), Gaps = 44/322 (13%)
Query: 16 LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVG 75
L LG++R+ D + D V Y +++ G+ KG+ ++ +E V
Sbjct: 147 LALGYLRNNDVVDI----------------DNVTYNTVIWGFCQKGLVDQGFGLLSEMVK 190
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
+ ++ N ++ C G A + + + + ++ N + DGYC
Sbjct: 191 R--GLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVD-----GGVTKDVIGLNTLIDGYC 243
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM---------- 185
G A E+ D +++N L+ CK G L AE L+ E+
Sbjct: 244 EAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRL 303
Query: 186 ---------SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
K + P TY L+ A + V++ + ++KM+ +G+ P++ + ++
Sbjct: 304 KNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSIL 363
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+ G L EA F M + L + SY ++ +L G++ E + ++ GI
Sbjct: 364 YGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVR-GI 422
Query: 296 EFSEELQEFVKGELSKEGREEE 317
F V L K G+ +E
Sbjct: 423 SFDIVTCTTVMDGLFKVGKTKE 444
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 8/183 (4%)
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
PP + + + F + Y RF A F M P +N L+ Q +G++
Sbjct: 51 PPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLV 110
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRK--MVDSGLRPNLAVYN 233
++ + +Y +M GV PD ++ +L+ + +V +D Y R +VD + YN
Sbjct: 111 SQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI----DNVTYN 166
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
++ Q G++D+ MVK+ L D + ++K G L + E V L D
Sbjct: 167 TVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIG-LVQYAEWVMYNLVD 225
Query: 293 GGI 295
GG+
Sbjct: 226 GGV 228
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N ++ +LC G D AL ++N + ++ ++N + G+C +G +
Sbjct: 133 NVLVHSLCKVGDLDLAL---GYLRNN----DVVDIDNVTYNTVIWGFCQKGLVDQGFGLL 185
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M + D+++ N L+ C+ G++ AE + + D GV D L+D E
Sbjct: 186 SEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEA 245
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
+ S ++ ++ YN L+ + G L A+S F+
Sbjct: 246 GLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFN 291
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 160/337 (47%), Gaps = 15/337 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G++ D V ++ L+ G + +LF + +KLG + V YG+L+KG G
Sbjct: 155 RGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRM-QKLG-CTPNVVTYGTLIKGLCALGNI 212
Query: 64 EEAMECYNEAVGENS----SVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
A++ + E + + S + + + ++ + ++D LC G ++EA+ LF+ M ++ P
Sbjct: 213 NIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQP-- 270
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ +F+V+ D C +G+ A ++ M + P+ ++ +LI C G L A+
Sbjct: 271 ---NVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAK 327
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
EL+ M KG PD +Y +L++ + +V++ F +M+ G+ P++ L+ L
Sbjct: 328 ELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKAL 387
Query: 240 VQVGMLDEAKSFFDIMVKKLKM--DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
G +D+AK F + +K M D + L G + E +++ L+ ++
Sbjct: 388 FLAGKVDDAKELFRV-IKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNE-LESYNMKL 445
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKA 334
E + L K G+ E +L EK E + A
Sbjct: 446 DIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDA 482
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 14/289 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V + Y+ L+ GF GD + LF + K G D + Y L+ GY
Sbjct: 298 MIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSK--GYEPDVISYNMLINGYCKT 355
Query: 61 GMEEEAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
EEAM+ +NE VG VK S V +L AL GK D+A +LF R+ + PK
Sbjct: 356 LKVEEAMKLFNEMLHVGMWPDVKTSGV----LLKALFLAGKVDDAKELF-RVIKPYAMPK 410
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L + + DG C G +A+++F ++ Y D +F LID LCK G L A
Sbjct: 411 DLCICC----IFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETA 466
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EL+ ++ ++G+ PD Y ++ + +VD F+KM ++G P+L Y+ L+
Sbjct: 467 WELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRG 526
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIV 286
+ L++ M++K + DD Y + + K E L+++
Sbjct: 527 FYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLL 575
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 11/180 (6%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKD 142
S + N +L L + + L+ +M P +L + N++ + C R +
Sbjct: 90 SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP-----DLLTLNILINCLCNVNRINE 144
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
+ + PD ++F LI LC + EA +L+ M G P+ TYG L+
Sbjct: 145 GLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIK 204
Query: 203 ACFEVNRVDDGATYFRKMVDS------GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
+ ++ + ++M++ RPN+ Y+ ++ L +VG +EA F+ MV
Sbjct: 205 GLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMV 264
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 20/238 (8%)
Query: 95 CNNGKFD--EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
C G +A + FD M ++ SFN + G + ++++M
Sbjct: 70 CKTGSISVTQAHQFFDLMMR----------SIFSFNRLLAGLAKIEHYSQVFSLYKQMHL 119
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
PD L+ N LI+ LC + E + +G PD T+ L+ +R+ +
Sbjct: 120 AGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIE 179
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-------VKKLKMDDAS 265
F +M G PN+ Y L+ L +G ++ A + M V + + S
Sbjct: 180 ATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVIS 239
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
Y ++ L G +E + + ++D G++ + + L KEG+ + KL+E
Sbjct: 240 YSIIIDGLCKVGNWEEAICLFNEMVDQ-GVQPNVVTFSVLIDMLCKEGQVIKAKKLLE 296
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
++ +G D + YS ++ GF + G D LF++++E G D + Y LM+G++
Sbjct: 473 LYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEE--NGCSPDLITYSILMRGFYES 530
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR 109
E+ ++ + + ++ A V D +C + K+ E L L R
Sbjct: 531 NKLEKVVQLLHRMIEKDVWPDDGIYA--IVEDMVCKDEKYKEWLDLLQR 577
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 106/203 (52%), Gaps = 9/203 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M K + + V YS ++ G+ + G D LF E+K G+ D V Y +L+ Y
Sbjct: 244 MPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMK--FLGISLDRVSYNTLLSIYAKL 301
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EEAM+ E ENS ++ V N++L K+D K+F+ MK H P
Sbjct: 302 GRFEEAMDVCREM--ENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSP--- 356
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL +++ + D Y G +++A++VFR+ + D + ++ LID LCKNG++ A
Sbjct: 357 --NLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVS 414
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA 203
L EM+ +G+ P+ TY ++DA
Sbjct: 415 LLDEMTKEGIRPNVVTYNSIIDA 437
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 108/206 (52%), Gaps = 9/206 (4%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQG--RF 140
+ A ++++ A +G +EA+K+F MK+ P NL ++N + D CG+G F
Sbjct: 111 TVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKP-----NLVTYNAVIDA-CGKGGVEF 164
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
K +E+F +M PD ++FN+L+ K G+ A L EM ++G++ D +TY L
Sbjct: 165 KRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTL 224
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKL 259
+DA + ++D +M + PN+ Y+ ++ + G LD+A++ F+ M +
Sbjct: 225 LDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGI 284
Query: 260 KMDDASYKFMMKALSDGGKLDEILEI 285
+D SY ++ + G+ +E +++
Sbjct: 285 SLDRVSYNTLLSIYAKLGRFEEAMDV 310
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D Y+ L+ + G D F + E+ K ++ + V Y +++ GY
Sbjct: 209 MVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAK--NILPNVVTYSTMIDGYAKA 266
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A +NE + + + V+ N++L G+F+EA+ + M+N +
Sbjct: 267 GRLDDARNLFNEM--KFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSG-----I 319
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ ++N + GY Q ++ +VF +M SP+ L+++ LID K G+ EA +
Sbjct: 320 RKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMD 379
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
++ E G+ D Y L+DA + V+ + +M G+RPN+ YN ++
Sbjct: 380 VFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 435
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 10/266 (3%)
Query: 29 VFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANN 88
V +F+E+ G+ D + + SL+ G+ E A E V N + N
Sbjct: 167 VLEIFDEMLRN--GMQPDRITFNSLLAVCSKGGLWEAARSLSCEMV--NRGIDQDIFTYN 222
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
++LDA+C G+ D A ++ M P K + N+ +++ M DGY GR DA +F
Sbjct: 223 TLLDAVCKGGQLDMAFEIMSEM-----PAKNILPNVVTYSTMIDGYAKAGRLDDARNLFN 277
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+M S D +S+N L+ K G EA ++ EM + G+ D TY L+ +
Sbjct: 278 EMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQY 337
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
+ D F +M + PNL Y+ L+ + G+ EA F K LK D Y
Sbjct: 338 KYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYS 397
Query: 268 FMMKALSDGGKLDEILEIVGGILDDG 293
++ AL G ++ + ++ + +G
Sbjct: 398 ALIDALCKNGLVESAVSLLDEMTKEG 423
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 142/330 (43%), Gaps = 47/330 (14%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V+S+ ++ G + S L + + GG + + V Y +++ G G ++A
Sbjct: 159 PNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAY 218
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM-KNEHNPPKRLAVNLGS 126
Y E + + + + V +S++ ALC D+A+++ DRM KN P N +
Sbjct: 219 ATYREML--DRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTP------NCFT 270
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+ + G+C G+ +AI+ KM P+ +++++ +D LCKNG EA +++ M
Sbjct: 271 YTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMV 330
Query: 187 DKGVNPDEYTYGLL------------MDACFEV-----------------------NRVD 211
+G+ PD TY L M F++ +VD
Sbjct: 331 KRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVD 390
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ F KM GL+PN Y+ L+ ++ ++ A + F MV + + +Y M+
Sbjct: 391 EAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIML 450
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEE 300
+ L G+ E I+ G + E+
Sbjct: 451 QGLFRTGRTATAKEFYVQIIKSGKKDLIEQ 480
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 127/262 (48%), Gaps = 9/262 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + + + V+YS ++ + D + + + + GV + Y SL+ G+
Sbjct: 224 MLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKN--GVTPNCFTYTSLVHGFCSS 281
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA++ + E + N V+ + V +S +D LC NG+ EA K+FD M P
Sbjct: 282 GQLTEAIK-FLEKMCSNG-VEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKP--- 336
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ +++ + GY +G + +F M + PD FN LI K G + EA
Sbjct: 337 --DITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAML 394
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M +G+ P+ TY L++ ++ R+++ F++MV +G+ PN YN ++ L
Sbjct: 395 VFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLF 454
Query: 241 QVGMLDEAKSFFDIMVKKLKMD 262
+ G AK F+ ++K K D
Sbjct: 455 RTGRTATAKEFYVQIIKSGKKD 476
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 120/249 (48%), Gaps = 10/249 (4%)
Query: 40 LGGVVSDG-----VVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL 94
LG VV G +++ L+KG ++AM+ + E S V + ++ +L L
Sbjct: 113 LGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELSCVP-NVFSHTIILKGL 171
Query: 95 CNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
C+ + EAL+L M ++ N+ S++ + DG G A +R+M + R
Sbjct: 172 CHENRSQEALELLHMMADDGG---GCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRR 228
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
P+ + ++++I LCK + +A E++ M GV P+ +TY L+ ++ +
Sbjct: 229 ILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAI 288
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKAL 273
+ KM +G+ PN+ Y+ + L + G EA+ FD MVK+ LK D +Y ++
Sbjct: 289 KFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGY 348
Query: 274 SDGGKLDEI 282
+ G L E+
Sbjct: 349 AIEGALVEM 357
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 18/186 (9%)
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG---VNP 192
G G +DA++VF ++ S N + + ++ A A + M+ G V P
Sbjct: 30 GSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNP-AAAVSRFNRMARAGASMVTP 88
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+TYG+L+ C R+D G +V G R ++N L+ L D+A
Sbjct: 89 TVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDA---M 145
Query: 253 DIMVKKLK-----MDDASYKFMMKALSDGGKLDEILEIVGGILDDGG------IEFSEEL 301
DI+++ + + S+ ++K L + E LE++ + DDGG + +S +
Sbjct: 146 DIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVI 205
Query: 302 QEFVKG 307
+KG
Sbjct: 206 DGLLKG 211
>gi|293336971|ref|NP_001167873.1| uncharacterized protein LOC100381578 [Zea mays]
gi|223944573|gb|ACN26370.1| unknown [Zea mays]
gi|414585240|tpg|DAA35811.1| TPA: hypothetical protein ZEAMMB73_503732 [Zea mays]
Length = 640
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 148/344 (43%), Gaps = 34/344 (9%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y+ L+ G+ R G + +++E + D V Y +LM+ ++ + + +
Sbjct: 239 DVVSYNILIKGYCRAGRTQDAMARLADMREH-AELAPDKVTYLTLMQRHYSEATFPQCIA 297
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP-----KRLAVN 123
+ E ++ A V+ AL +GK EAL +F+RM P L +
Sbjct: 298 LFQEMEERGMGKEIPQHAYVLVIGALSKDGKPFEALAVFERMSKRGCPANAAMYTALIDS 357
Query: 124 LGSFN-------------------------VMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
+G F V+ + C G ++A+ FR E + +
Sbjct: 358 MGKFGREKEAMALFERMKATGIELDAVTYGVVVNCLCRFGNLEEALACFRSCVEKGVAVN 417
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFR 218
+ + +LID K GM+ +A+EL+ EM KG PD Y Y +L+DA + R DD +++
Sbjct: 418 AIFYTSLIDGFGKTGMVDQAKELFEEMVAKGFVPDSYCYNVLIDALVKAGRTDDACAFYK 477
Query: 219 KMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
+M D G + Y L+ L + +EA F+D M+ K + A+++ + L G
Sbjct: 478 RMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRALSNGLCLSG 537
Query: 278 KLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
K I+ + G I E E + L K GR ++ KL
Sbjct: 538 KFSRAWRILDELAPMGVI--PETAHEDMINVLCKTGRFKQACKL 579
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 146/323 (45%), Gaps = 21/323 (6%)
Query: 12 VYSYLMLGFVRDGDSDGV---FRLFEELKEKLGGVVSD--GVVYGSLMKGYFMKGMEEEA 66
Y L+ F R ++D +L EL+ V+S SL++ G+ EE
Sbjct: 129 CYVSLLHSFARSRETDAAGQARQLVAELRAHGDAVLSHLTPASSASLIRSLAAFGLSEEL 188
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
+ + + V+ S + N +LD L N D A+ +FD M EH R+ ++ S
Sbjct: 189 LWAWQAM--RLAGVEPSRLTYNCLLDGLVNADLLDTAINVFDAMSTEH----RVRPDVVS 242
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEY-RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
+N++ GYC GR +DA+ M E+ +PD +++ L+ + + L+ EM
Sbjct: 243 YNILIKGYCRAGRTQDAMARLADMREHAELAPDKVTYLTLMQRHYSEATFPQCIALFQEM 302
Query: 186 SDKGVNPD--EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
++G+ + ++ Y L++ A + + + F +M G N A+Y L+ + + G
Sbjct: 303 EERGMGKEIPQHAYVLVIGALSKDGKPFEALAVFERMSKRGCPANAAMYTALIDSMGKFG 362
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFS 298
EA + F+ M +++D +Y ++ L G L+E L ++ G I ++
Sbjct: 363 REKEAMALFERMKATGIELDAVTYGVVVNCLCRFGNLEEALACFRSCVEKGVAVNAIFYT 422
Query: 299 EELQEFVKGELSKEGRE--EEVV 319
+ F K + + +E EE+V
Sbjct: 423 SLIDGFGKTGMVDQAKELFEEMV 445
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 163/354 (46%), Gaps = 42/354 (11%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRL-------------------FEELKEK------ 39
G AD V Y L+ GF R + + R+ +EL++K
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322
Query: 40 ------LG--GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
LG G+V + Y +L+ ++A + E G ++ + V ++
Sbjct: 323 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGR--GLEPNEVTYAILI 380
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
ALC G ++AL LFD+M++ K + V + +N + +GYC QG A + M
Sbjct: 381 HALCKRGMIEDALCLFDKMRD-----KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV 435
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ +P S++ LI LC+NG L+ EL+ EM+++G+ + YT+ L++ + ++D
Sbjct: 436 KEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMD 495
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ A F KM+DS + PN +N ++ VG + +A +D MV+ LK D+ +Y+ ++
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 555
Query: 271 KALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
L + + E V + + + + L + G +EGR E L ++
Sbjct: 556 SGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYG-FFREGRFTETYHLWDE 608
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G D V ++ ++ ++ D + LF E+KE+ GV D + Y ++ +
Sbjct: 609 MAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ--GVKPDDIFYTCMIDALSKE 666
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A+ C+++ V + S + V + +++ LC +G A L M + P +
Sbjct: 667 ENMIQALNCWDQMVVDGYSP--NTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKF 724
Query: 121 AVN-----------------------------LGSFNVMADGYCGQGRFKDAIEVFRKMG 151
N + SFN++ G C G+ ++AI++ K+
Sbjct: 725 TYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKIT 784
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
E SPD +S++ +I +LCK G + +A EL+ EM KG+ PD Y + + C D
Sbjct: 785 ESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESD 844
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLV 236
+ M+ SG++PN Y L+
Sbjct: 845 KALGIYTNMIRSGVQPNWDTYRALL 869
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 144/325 (44%), Gaps = 11/325 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D VY+ + + + DG L ++ + GV + V Y LM G
Sbjct: 189 MLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE--GVKASAVPYNVLMYGLCKN 246
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA+E N V N V V +++ C + + AL++ M P
Sbjct: 247 MRVQEAVEVKNVMV--NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSE- 303
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ + M D + ++A + K+G+ P+ ++N LID+LCKN +A+
Sbjct: 304 ----ANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM+ +G+ P+E TY +L+ A + ++D F KM D G++ + YN L+
Sbjct: 360 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 419
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G LD A+ MVK+ L ASY ++ L G L +E+ + + G +
Sbjct: 420 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 479
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+ G K+ + +E +L +K
Sbjct: 480 TFTALING-FCKDKKMDEAARLFDK 503
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 142/312 (45%), Gaps = 18/312 (5%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
+ + V ++ ++ G+ G+ F+L++++ E G+ D Y SL+ G + +A
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEM--GLKPDNYTYRSLISGLCLTSGVSKA 567
Query: 67 MECYNEAVG--ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
NE V ENS ++ + ++L G+F E L+D M + + ++L
Sbjct: 568 ----NEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA-----VRGVKLDL 618
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
SF ++ Q + + +FR+M E PD + + +ID L K + +A + +
Sbjct: 619 VSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ 678
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G +P+ T+ +L++ + + ++M+ + PN YN + G
Sbjct: 679 MVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGD 738
Query: 245 LDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEE 300
+++AK M++ S+ ++K L GK+ E ++++ I + G I +S
Sbjct: 739 MEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTI 798
Query: 301 LQEFVK-GELSK 311
+ E K G+++K
Sbjct: 799 IHELCKMGDINK 810
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
+ ++ L K A A +L+ +M GV+ DEY Y + A E +D +M
Sbjct: 167 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 226
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
G++ + YN L+ L + + EA ++MV + D+ +Y+ ++ +L+
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
L I ++ G + SE F+ EL K+ EE L
Sbjct: 287 ALRITHDMIRLGFVP-SEANCSFMIDELRKKELVEEAFSL 325
>gi|125557435|gb|EAZ02971.1| hypothetical protein OsI_25111 [Oryza sativa Indica Group]
Length = 728
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 7/253 (2%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
+ SV+ V ++ AL G D+ L++ RM+ E P ++ + +
Sbjct: 259 HCSVRPMPVTFAIMVRALARAGMTDKLLEMIGRMRAEVCRP-----DVFVYTALVKTMVR 313
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
G + I V+ +M PDT+++ +I LC GM+ +AEEL+GEM KG+ D
Sbjct: 314 WGHMEGCIRVWEEMRRDHVDPDTMAYTTMIAGLCNAGMVEKAEELFGEMRRKGLLVDRMV 373
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
Y L+D RV DG ++MVD+G R +L +YN L+G L ++ D+A F I+V
Sbjct: 374 YASLIDGYVSTGRVSDGCRVLKEMVDAGYRADLGIYNTLIGGLCEIEREDKAHKMFQIVV 433
Query: 257 KK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
++ L + ++ +D G++ + +V ++ + + E L +F+K K G E
Sbjct: 434 QEDLIPSSETVSPLLARYADKGEMVKFFGLVDKLV-ELSLPIVEILVDFLKLFACKSGNE 492
Query: 316 EEVVKLMEKKERE 328
+ V++ R
Sbjct: 493 LKAVEVFNAFRRR 505
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 151/358 (42%), Gaps = 59/358 (16%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D VY+ L+ VR G +G R++EE++ V D + Y +++ G GM E+A E
Sbjct: 300 DVFVYTALVKTMVRWGHMEGCIRVWEEMRRD--HVDPDTMAYTTMIAGLCNAGMVEKAEE 357
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ E + + + S++D + G+ + ++ M + +LG +N
Sbjct: 358 LFGEM--RRKGLLVDRMVYASLIDGYVSTGRVSDGCRVLKEMVDAG-----YRADLGIYN 410
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDT----------------LSFNNLIDQL--- 169
+ G C R A ++F+ + + P + + F L+D+L
Sbjct: 411 TLIGGLCEIEREDKAHKMFQIVVQEDLIPSSETVSPLLARYADKGEMVKFFGLVDKLVEL 470
Query: 170 ----------------CKNGMLAEAEELYGEMSDKGVNPDEYT---YGLLMDACFEVNRV 210
CK+G +A E++ +G Y+ Y +L++ ++
Sbjct: 471 SLPIVEILVDFLKLFACKSGNELKAVEVFNAFRRRG----HYSVGIYNILIENLLKIKER 526
Query: 211 DDGATYFRKMVDS-GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS-YKF 268
F +M S +P+ Y+ ++ V ++EA S +++M+K + + S Y
Sbjct: 527 KKALVLFEEMQSSDDCKPDSCTYSHMIPCFVDEENIEEACSCYNLMMKAVWIPSISAYCA 586
Query: 269 MMKALSDGGKLDEILEIVG---GILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
++K L G+++ + +V G +++G +EF L E + E+V+K+++
Sbjct: 587 LVKGLCKKGEINAAISLVKDCLGNVENGPMEFKYTLTIL---EACQSKSPEKVIKVVD 641
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 141/347 (40%), Gaps = 48/347 (13%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + Y+ ++ G G + LF E++ K G++ D +VY SL+ GY G +
Sbjct: 335 DTMAYTTMIAGLCNAGMVEKAEELFGEMRRK--GLLVDRMVYASLIDGYVSTGRVSDGCR 392
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP----------- 117
E V ++ + N+++ LC + D+A K+F + E P
Sbjct: 393 VLKEMV--DAGYRADLGIYNTLIGGLCEIEREDKAHKMFQIVVQEDLIPSSETVSPLLAR 450
Query: 118 ---------------KRLAVNLGSFNVMADGY----CGQGRFKDAIEVF---RKMGEYRC 155
K + ++L ++ D C G A+EVF R+ G Y
Sbjct: 451 YADKGEMVKFFGLVDKLVELSLPIVEILVDFLKLFACKSGNELKAVEVFNAFRRRGHYSV 510
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEM-SDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
+N LI+ L K +A L+ EM S PD TY ++ + +++
Sbjct: 511 G----IYNILIENLLKIKERKKALVLFEEMQSSDDCKPDSCTYSHMIPCFVDEENIEEAC 566
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKAL- 273
+ + M+ + P+++ Y LV L + G ++ A S + ++ +K+ + L
Sbjct: 567 SCYNLMMKAVWIPSISAYCALVKGLCKKGEINAAISLVKDCLGNVENGPMEFKYTLTILE 626
Query: 274 -SDGGKLDEILEIVGGILDDGG----IEFSEELQEFVKGELSKEGRE 315
++++++V +++ G I +S + F K S E R+
Sbjct: 627 ACQSKSPEKVIKVVDEMIELGYSIEEIIYSAIIYGFCKYASSTEARK 673
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 7/185 (3%)
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDTLSFN 163
+L D M+ P V+ N++ + G R A+ R+ E+ P+ + N
Sbjct: 181 QLPDLMRAHGKP-----VSHSQLNLLVRLHTGARRPLRALHALRRFRHEFSVQPEVHACN 235
Query: 164 NLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS 223
++ L G + + +L+ EMS V P T+ +++ A D +M
Sbjct: 236 RVLGALAAAGHVDDTLKLFDEMSHCSVRPMPVTFAIMVRALARAGMTDKLLEMIGRMRAE 295
Query: 224 GLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEI 282
RP++ VY LV +V+ G ++ ++ M + + D +Y M+ L + G +++
Sbjct: 296 VCRPDVFVYTALVKTMVRWGHMEGCIRVWEEMRRDHVDPDTMAYTTMIAGLCNAGMVEKA 355
Query: 283 LEIVG 287
E+ G
Sbjct: 356 EELFG 360
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +GF + V Y L+ G + G+++ RL +++ G D VVY S++
Sbjct: 165 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQ--GNCQPDVVVYTSIIDSLCKD 222
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA +++ VG+ S + S++ +LCN ++ L ++M N ++
Sbjct: 223 RQVTEAFNLFSKMVGQGISPDI--FTYTSLIHSLCNLCEWKHVTTLLNQMINS-----KI 275
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ F+ + D C +G+ +A +V M P+ +++N L+D C + EA +
Sbjct: 276 MPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVK 335
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ M G P+ +Y L++ ++ R+D F +M L PN YN L+
Sbjct: 336 VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXC 394
Query: 241 QVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEIVGGI 289
VG L +A + F MV ++ D A+Y+ ++ L LDE + ++ I
Sbjct: 395 HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTI 444
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 124/279 (44%), Gaps = 10/279 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D ++ L+ G +G LF+++ + G + V YG+L+ G G
Sbjct: 134 GHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE--GFQPNVVTYGTLINGLCKVGNTN 191
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A+ E + + V S++D+LC + + EA LF +M + P ++
Sbjct: 192 AAIRLLRSM--EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP-----DI 244
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + C +K + +M + PD + F+ ++D LCK G + EA ++
Sbjct: 245 FTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDM 304
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +GV P+ TY LMD + +D+ F MV +G PN+ YN L+ ++
Sbjct: 305 MIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQR 364
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEI 282
+D+A F+ M +K L + +Y +M G D I
Sbjct: 365 MDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAI 403
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 109/207 (52%), Gaps = 6/207 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++ LC GK +AL LFD+M E P N+ ++ + +G C G AI +
Sbjct: 143 TTLIRGLCVEGKIGDALHLFDKMIGEGFQP-----NVVTYGTLINGLCKVGNTNAAIRLL 197
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
R M + C PD + + ++ID LCK+ + EA L+ +M +G++PD +TY L+ + +
Sbjct: 198 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNL 257
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASY 266
T +M++S + P++ +++ +V L + G + EA D+M+ + ++ + +Y
Sbjct: 258 CEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTY 317
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDG 293
+M ++DE +++ ++ +G
Sbjct: 318 NALMDGHCLQSEMDEAVKVFDTMVHNG 344
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 8/211 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
GV + V Y +LM G+ ++ +EA++ ++ V ++ + ++ N++++ C + D
Sbjct: 309 GVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMV--HNGYAPNVISYNTLINGYCKIQRMD 366
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+A LF+ M K L N ++N + C GR +DAI +F +M + PD +
Sbjct: 367 KATYLFEEMCQ-----KELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLAT 420
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ L+D LCK L EA L + ++PD Y +++D ++ F +
Sbjct: 421 YRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLS 480
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
GLRPN+ Y ++ L + G+LDEA F
Sbjct: 481 SKGLRPNVRTYTIMINGLCRRGLLDEANKLF 511
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 110/241 (45%), Gaps = 10/241 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M ++G + V Y+ LM G + D ++F+ + G + + Y +L+ GY
Sbjct: 305 MIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH--NGYAPNVISYNTLINGYCKI 362
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A + E + + + V N+++ C+ G+ +A+ LF M P
Sbjct: 363 QRMDKATYLFEEMCQK--ELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIP--- 416
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L ++ ++ D C + +A+ + + + PD + +ID +C+ G L A +
Sbjct: 417 --DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARD 474
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +S KG+ P+ TY ++++ +D+ F +M +G P+ YN + L+
Sbjct: 475 IFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLL 534
Query: 241 Q 241
Q
Sbjct: 535 Q 535
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 115/274 (41%), Gaps = 35/274 (12%)
Query: 83 SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK-----RLAVNLG------------ 125
S++++N N D+AL F+RM + H PP RL ++
Sbjct: 33 SSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLS 92
Query: 126 -------------SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKN 172
+ N++ + +C R A V K+ + PDT +F LI LC
Sbjct: 93 NQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVE 152
Query: 173 GMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY 232
G + +A L+ +M +G P+ TYG L++ +V + R M +P++ VY
Sbjct: 153 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 212
Query: 233 NRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
++ L + + EA + F MV + + D +Y ++ +L + + + ++ ++
Sbjct: 213 TSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI- 271
Query: 292 DGGIEFSEELQEFVKGELSKEGREEE---VVKLM 322
+ I + V L KEG+ E VV +M
Sbjct: 272 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMM 305
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 2/184 (1%)
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLM 201
DA+ F +M P T+ FN L+ + K L +M G+ PD YT +L+
Sbjct: 52 DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 111
Query: 202 DACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLK 260
++ +NR+ + K++ G +P+ A + L+ L G + +A FD M+ + +
Sbjct: 112 NSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 171
Query: 261 MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVK 320
+ +Y ++ L G + + ++ ++ G + + + L K+ + E
Sbjct: 172 PNVVTYGTLINGLCKVGNTNAAIRLLRS-MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFN 230
Query: 321 LMEK 324
L K
Sbjct: 231 LFSK 234
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 9/310 (2%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D + ++ V+DG L ++EK D V Y S+M Y++ G E+
Sbjct: 294 DTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKA 353
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
++ V E VK + V+ N++L A + G +AL +F +K P ++ S+
Sbjct: 354 VFDMMVAE--GVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRP-----DVVSYT 406
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ + Y G+ + A E F++M + C P+ +S+N LID GM EA L EM
Sbjct: 407 TLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKD 466
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ PD + L+ AC ++ T G++ N+ YN +G + G +A
Sbjct: 467 GIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKA 526
Query: 249 KSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+ +M+ + D +Y ++ L GK E L+ ++ D I ++E+ +
Sbjct: 527 LELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMV-DLRIPLTKEVYSSLIC 585
Query: 308 ELSKEGREEE 317
K+G+ E
Sbjct: 586 SYVKQGKLTE 595
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 139/320 (43%), Gaps = 41/320 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDG---DSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY 57
M +G + V Y+ L+ + G D+ G+F+L ++ G+ D V Y +L+ Y
Sbjct: 358 MVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQ-----NGLRPDVVSYTTLLNAY 412
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
G E+A E + E +S + + V+ N+++DA + G F EA+ L M+ + PP
Sbjct: 413 GRSGQPEKAREAFKEM--RKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPP 470
Query: 118 KRLAV------------------------------NLGSFNVMADGYCGQGRFKDAIEVF 147
+++ N+ +N Y G + A+E++
Sbjct: 471 DVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELY 530
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M +PD +++N LI LCK G AE+ + + +M D + + Y L+ + +
Sbjct: 531 AVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQ 590
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASY- 266
++ + + F M +SG P++ Y ++ G A F M DA
Sbjct: 591 GKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIIC 650
Query: 267 KFMMKALSDGGKLDEILEIV 286
+M+AL+ G + + +L+++
Sbjct: 651 SSLMEALNRGSQHERVLQLM 670
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 33/224 (14%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN------------------------ 123
NS++ A G++ A+ + D M PP R N
Sbjct: 194 NSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTR 253
Query: 124 ------LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
L + N++ + ++ AI F M +PDT + N +I L K+G E
Sbjct: 254 NGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGE 313
Query: 178 AEELYGEMSDKGVN--PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
A EL M +K PD TY +M + + +V+D F MV G++PN+ YN L
Sbjct: 314 AIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNAL 373
Query: 236 VGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
+G GM +A F ++ + L+ D SY ++ A G+
Sbjct: 374 LGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQ 417
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 83/193 (43%), Gaps = 5/193 (2%)
Query: 98 GKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSP 157
G A+ +F MKN+ N R + + +M + + A +F +M E+RC P
Sbjct: 133 GSLQHAVHVFRWMKNQENYCARNDI----YGMMIRLHARHSQIDQARGLFFEMQEWRCKP 188
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
D +N+LI + G A + +M + P TY +++AC
Sbjct: 189 DADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELC 248
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDG 276
+KM +G+ P+L +N ++ +A ++F++M + D + ++ L
Sbjct: 249 KKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKD 308
Query: 277 GKLDEILEIVGGI 289
G+ E +E++ +
Sbjct: 309 GQYGEAIELLNSM 321
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 8/188 (4%)
Query: 97 NGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS 156
+ + D+A LF M+ P + +N + + G+++ AI + M
Sbjct: 168 HSQIDQARGLFFEMQEWRCKP-----DADIYNSLIHAHARAGQWRWAINIMDDMLRAAIP 222
Query: 157 PDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY 216
P ++NN+I+ G +A EL +M+ GV PD T+ +++ A ++ Y
Sbjct: 223 PSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAY 282
Query: 217 FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK---LKMDDASYKFMMKAL 273
F M + + P+ N ++ LV+ G EA + M +K D +Y +M +
Sbjct: 283 FEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSY 342
Query: 274 SDGGKLDE 281
GK+++
Sbjct: 343 YVCGKVED 350
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 109/249 (43%), Gaps = 15/249 (6%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
VYS L+ +V+ G F +KE G + D + Y ++++ Y G A + +
Sbjct: 579 VYSSLICSYVKQGKLTEAESTFSSMKE--SGCLPDVLTYTAMIEAYNDDGSWRNAWDLFK 636
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
E E ++V+ A+ +S+++AL + + L+L + MK + P + A F ++A
Sbjct: 637 EM--EGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAY----FEIIA 690
Query: 132 DGYCGQGR-FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
C R +K A E+ + S + N+L+ L K G +L+ +M
Sbjct: 691 S--CSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCS 748
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
TY +L+ V + + M D+G+ P L +Y ++ + + D +
Sbjct: 749 TVGVSTYTVLLRNLLAVGKWRKYIEVLQWMEDAGVSPTLYMYQNVLPYIWR----DNSMD 804
Query: 251 FFDIMVKKL 259
+ +M +K+
Sbjct: 805 YVTLMQEKI 813
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 11/274 (4%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
DP V ++ L+ G +G+ R + L++ G S+ YG+++ G G
Sbjct: 137 VDPTVVTFATLINGLCAEGNVARAARFADSLEDM--GHQSNSYTYGAIINGLCKAGDTSG 194
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A+ + G N + + +A ++++D+LC +G EAL LF M ++ P +L
Sbjct: 195 AILYLEKIKGRNCDLDV-VIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQP-----DLV 248
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + G C GR+K+A + M P+ +FN L+D CK+GM++ A+ + G M
Sbjct: 249 AYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFM 308
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
GV PD TY ++ ++++ D F M+ G PNL Y+ L+ + +
Sbjct: 309 VHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNI 368
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGK 278
++A MV L D ++ ++ GK
Sbjct: 369 NKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGK 402
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK---LGGVVSDGVVYGSLMKGYFMKG 61
G ++ Y ++ G + GD+ G E++K + L V++ + SL K G
Sbjct: 171 GHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCK----DG 226
Query: 62 MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
M EA+ ++ + ++ VA NS++ LCN G++ EA L M + P
Sbjct: 227 MVCEALNLFSGMTSK--GIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMP---- 280
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N+ +FNV+ D +C G A + M PD +++N++I C + +A ++
Sbjct: 281 -NVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKV 339
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
+ M KG P+ TY L+ + ++ +MV+SGL P++ ++ L+G +
Sbjct: 340 FELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCK 399
Query: 242 VGMLDEAKSFFDIM 255
G + AK F M
Sbjct: 400 AGKPEAAKELFCTM 413
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 148/328 (45%), Gaps = 12/328 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D V Y+ L+ G G L + K G++ + + L+ +
Sbjct: 238 MTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRK--GIMPNVQTFNVLVDNFCKD 295
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM A V + V+ V NSV+ C + +A+K+F+ M ++ P
Sbjct: 296 GMISRAKTIMGFMV--HVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLP--- 350
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
NL +++ + G+C A+ + +M +PD ++++ LI CK G A+E
Sbjct: 351 --NLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKE 408
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ M + +P+ T +++D F+ + + FR+M L N+ +YN ++ +
Sbjct: 409 LFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMC 468
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
G L++A+ F + K +K+D +Y M+K L G LD+ ++ + ++G +
Sbjct: 469 SFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEF 528
Query: 300 ELQEFVKGELSKE--GREEEVVKLMEKK 325
FV+G L + R + + LM+ K
Sbjct: 529 TYNVFVRGLLQRYDISRSTKYLLLMKGK 556
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 13/227 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGF+ + V YS L+ G+ + + + L E+ G+ D V + +L+ G+
Sbjct: 343 MIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNS--GLNPDVVTWSTLIGGFCKA 400
Query: 61 GMEEEAME--CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G E A E C ++ +++ A+ +LD L EA+ LF M+
Sbjct: 401 GKPEAAKELFCTMHEHDQHPNLQTCAI----ILDGLFKCQFHSEAISLFREMEK-----M 451
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
L +N+ +N++ DG C G+ DA E+F + D +++ +I LCK G+L +A
Sbjct: 452 NLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDA 511
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
E L +M + G P+E+TY + + + + Y M GL
Sbjct: 512 ENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGL 558
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 11/297 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDS-DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
M G A V Y+ ++ G++R D RL E +KE G D ++Y L+ G
Sbjct: 8 MMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKE--SGKKPDEILYNCLVNGLVN 65
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
G E A + ++ + V + V +++ N G+ + KLF MK++ P
Sbjct: 66 SGRLEAAEKILDDM--KQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESP-- 121
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N ++N + GY +G FK+A+E++ +M C+ D ++N I K G+L + E
Sbjct: 122 ---NSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDME 178
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
L EM KGV PD+ TY L+D + + R+M ++G RPN+ YN ++
Sbjct: 179 RLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSA 238
Query: 240 VQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+ + EA F ++ K + + +Y M+ G E ++ +++ G I
Sbjct: 239 RKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCI 295
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 10/275 (3%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
A+ V Y+ L+ + G +LF+E+K+K G + Y +L++GY KG+ +EA+
Sbjct: 86 ANLVTYTNLIKEYANAGRLQDCRKLFQEMKDK--GESPNSWTYNALIQGYGRKGLFKEAL 143
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
E Y+E G + + N + G ++ +L D M + PP ++ ++
Sbjct: 144 ELYDEMDGVGCAKDVHTY--NIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQV-----TY 196
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
N + D Y + F A E+ R+M E P+ ++N ++ K +AEA +L+ +
Sbjct: 197 NTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKS 256
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
KGV P+ TY ++ + A + +M+++G P + Y+ L+ GM E
Sbjct: 257 KGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQE 316
Query: 248 AKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
A + F M K + D Y +M A G+ E
Sbjct: 317 ALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCRE 351
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
RL +E+ K GV D V Y +L+ Y K +A E E + + + N +
Sbjct: 179 RLLDEMDTK--GVPPDQVTYNTLLDVYAKKSYFVKAHEILREMT--EAGYRPNIWTYNIM 234
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
L + EA +LF+ +K++ P N+ +++ M Y G + +A +++ +M
Sbjct: 235 LSSARKEQSVAEATQLFENLKSKGVVP-----NIVTYSAMLSLYGRHGLYTEAAKLWDEM 289
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E C P ++++ LI+ +GM EA + +M G+ PD Y LMDA + R
Sbjct: 290 IEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRC 349
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ + +M G P+ Y LV G L
Sbjct: 350 REAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 132/275 (48%), Gaps = 12/275 (4%)
Query: 10 PVVYSY-LMLGFV-RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P V++Y +M+ ++ ++GD + RLF +++E G+ D V Y SL+ GY G EE
Sbjct: 287 PSVFTYNVMIDYLCKEGDLENSRRLFVQMREM--GLSPDVVTYNSLIDGYGKVGSLEEVA 344
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+NE ++ + N +++ C K A + F MKN P N+ ++
Sbjct: 345 SLFNEM--KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKP-----NVVTY 397
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ + D +C +G + AI++F M P+ ++ +LID CK G L EA +L +M
Sbjct: 398 STLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ 457
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
GV + TY L+D + R+ + FR M+ G+ PN VY LV ++ +++
Sbjct: 458 AGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMED 517
Query: 248 AKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDE 281
A M + +K D Y ++ KL+E
Sbjct: 518 AMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEE 552
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 140/300 (46%), Gaps = 12/300 (4%)
Query: 29 VFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANN 88
V +F+ L VS V+ L + G+ EEA EC++ N A + N
Sbjct: 201 VCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRM--RNFRTLPKARSCN 258
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
+L L +G K F+ M P ++ ++NVM D C +G +++ +F
Sbjct: 259 FLLHRLSKSGNGQLVRKFFNDMIGAGIAP-----SVFTYNVMIDYLCKEGDLENSRRLFV 313
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+M E SPD +++N+LID K G L E L+ EM D G PD TY L++ +
Sbjct: 314 QMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFE 373
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYK 267
++ YF +M ++GL+PN+ Y+ L+ + GM+ A K F D+ L ++ +Y
Sbjct: 374 KMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYT 433
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR---EEEVVKLMEK 324
++ A G L E +++ +L G++ + + L K GR EEV + M K
Sbjct: 434 SLIDANCKAGNLTEAWKLLNDML-QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLK 492
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 139/286 (48%), Gaps = 10/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + VY+ L+ G+++ + ++ +++ E + D ++YGS++ G+ +
Sbjct: 490 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE--CNIKPDLILYGSIIWGHCSQ 547
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EE E ++ + + V + +++DA GK +AL F M++ +
Sbjct: 548 RKLEETKLILEEM--KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG-----V 600
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ V+ DG C G + A++ F +M P+ + +LID LCKN + A++
Sbjct: 601 EATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKK 660
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM +G+ PD + L+D + + + +M + + +L VY LV
Sbjct: 661 LFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFS 720
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
Q G L +A+ FF+ M++K + ++ +++ G+LDE +E+
Sbjct: 721 QCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 766
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 9/245 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ L+ G+ + G + V LF E+K+ G V D + Y L+ Y
Sbjct: 319 GLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDV--GCVPDIITYNGLINCYCKFEKMP 376
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A E ++E +N+ +K + V ++++DA C G A+KLF M+ P
Sbjct: 377 RAFEYFSEM--KNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEF---- 430
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++ + D C G +A ++ M + + +++ L+D LCK G + EAEE++
Sbjct: 431 -TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRS 489
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M G++P++ Y L+ + R++D ++M + ++P+L +Y ++
Sbjct: 490 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 549
Query: 245 LDEAK 249
L+E K
Sbjct: 550 LEETK 554
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 13/320 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V G D ++ L+ R + E++ G+V D + ++M+GY +
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY--GLVPDEKTFTTVMQGYIEE 237
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A+ + V S S V+ N ++ C G+ ++AL M N+
Sbjct: 238 GDLDGALRIREQMVEFGCS--WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG----F 291
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +FN + +G C G K AIE+ M + PD ++N++I LCK G + EA E
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +M + +P+ TY L+ + N+V++ R + G+ P++ +N L+ L
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGG----I 295
A F+ M K + D+ +Y ++ +L GKLDE L ++ + G I
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 296 EFSEELQEFVKGELSKEGRE 315
++ + F K ++E E
Sbjct: 472 TYNTLIDGFCKANKTREAEE 491
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 148/337 (43%), Gaps = 14/337 (4%)
Query: 1 MFVKGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF 58
M +G+ DP VY+Y ++ G + G+ + +++ + + V Y +L+
Sbjct: 321 MLQEGY--DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR--DCSPNTVTYNTLISTLC 376
Query: 59 MKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
+ EEA E V + + NS++ LC A++LF+ M+++ P
Sbjct: 377 KENQVEEATELAR--VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++N++ D C +G+ +A+ + ++M C+ +++N LID CK EA
Sbjct: 435 EF-----TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EE++ EM GV+ + TY L+D + RV+D A +M+ G +P+ YN L+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEF 297
+ G + +A M + D +Y ++ L G+++ +++ I G
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 298 SEELQEFVKGELSKEGREEEVVKLMEKKEREKAEAKA 334
++G K E + E E+ +A A
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDA 646
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 142/312 (45%), Gaps = 14/312 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG D Y+ L+ G D + ++++ L G + Y +L+ G+
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME--LSGCARSVITYNTLIDGFCKA 483
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA E ++E E V ++V N+++D LC + + ++A +L D+M E P +
Sbjct: 484 NKTREAEEIFDEM--EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + +C G K A ++ + M C PD +++ LI LCK G + A +
Sbjct: 542 -----TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV--GK 238
L + KG+N + Y ++ F + + FR+M++ P AV R+V G
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656
Query: 239 LVQVGMLDEAKSFFDIMVKKLKMDDASYKFMM-KALSDGGKLDEILEIVGGILDDGGIEF 297
G + EA F +++K + + S +M+ + L + ++++V ++ F
Sbjct: 657 CNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA--RF 714
Query: 298 SEELQEFVKGEL 309
SEE VKG L
Sbjct: 715 SEEEVSMVKGLL 726
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 7/226 (3%)
Query: 101 DEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
DE L + D M +E N++ DG K KM + PD
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG----NSLKLVEISHAKMSVWGIKPDVS 190
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+FN LI LC+ L A + +M G+ PDE T+ +M E +D +M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK--LKMDDASYKFMMKALSDGGK 278
V+ G + N +V + G +++A +F M + D ++ ++ L G
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ +EI+ +L +G + G L K G +E V+++++
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISG-LCKLGEVKEAVEVLDQ 355
>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 903
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 141/305 (46%), Gaps = 11/305 (3%)
Query: 6 FVADPVVY--SYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
F P V+ S ++ + R G D +E+ LG + + V SL+ GY M G +
Sbjct: 219 FEVSPDVFTCSIVVNAYCRCGKVDKAMAFAKEMDNSLG-LELNVVTCNSLINGYAMIG-D 276
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E M + E V + V S++ + C G +EA ++F+ + K+L +
Sbjct: 277 VEGMTRVLRLMSERG-VSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTE-----KKLVPD 330
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
V+ DGYC GR DA+ V M E +T N+LI+ CK+G L EAE++
Sbjct: 331 QHMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILT 390
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M+D + PD +TY L+D VD+ +M + P + YN L+ ++G
Sbjct: 391 RMNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIG 450
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
+ S + +M+K+ + ++ S +++AL G DE +++ +L G + + L
Sbjct: 451 AFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLN 510
Query: 303 EFVKG 307
+ G
Sbjct: 511 VMISG 515
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 148/323 (45%), Gaps = 11/323 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D Y+ L+ G+ R G D +L + +K VV + Y L+KGY G + +
Sbjct: 400 DHHTYNTLVDGYCRAGHVDEALKLCGRMCQK--EVVPTVMTYNILLKGYSRIGAFHDVLS 457
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+ + V + ++ +++L+AL G FDEA+KL+ E+ + L + + N
Sbjct: 458 LWKMML--KRGVTANEISCSTLLEALFKLGDFDEAMKLW-----ENVLARGLLTDTITLN 510
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
VM G C + +A E+ + +RC PD ++ L G L EA + M K
Sbjct: 511 VMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKK 570
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ P Y L+ F+ ++ A ++ GL P +A Y L+ +GM+D+A
Sbjct: 571 GIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD-DGGIEFSEELQEFVK 306
+ F+++ K + ++ + +L K DE ++ I+D D + + L+EF++
Sbjct: 631 YATCFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKEFLE 690
Query: 307 GELSKEGREEEVVKLMEKKEREK 329
+ + +++ + +E +K
Sbjct: 691 PSATTCLKTQKIAESVENSTPKK 713
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 38/289 (13%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG +Y+ L+ G + + V L EL+ + G+ YG+L+ G+ GM
Sbjct: 570 KGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRAR--GLTPTVATYGALITGWCNIGMI 627
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN----------- 112
++A E + + ++ ++ + + ++L KFDEA L ++ +
Sbjct: 628 DKAYATCFEMIEKGITLNVNICS--KIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSL 685
Query: 113 ---------------------EHNPPKRLAV-NLGSFNVMADGYCGQGRFKDAIEVFRKM 150
E++ PK+L V N +NV G C G+ DA ++F +
Sbjct: 686 KEFLEPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDL 745
Query: 151 -GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
R PD ++ LI +G + +A L EM+ KG+ P+ TY L+ ++
Sbjct: 746 LSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGN 805
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
VD RK+ G PN YN L+ L++ G + EA + M++K
Sbjct: 806 VDRAQRLLRKLPQKGTTPNAITYNTLIDGLIKSGDVAEAMRLKEKMIEK 854
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 24/214 (11%)
Query: 26 SDGVFRL--FEELKEKLGGVVSDGVVYGSLMKGY--FMKGMEEEAMECYN-----EAVGE 76
++ +FRL F+E L +V + L+ GY + +E A C E+V E
Sbjct: 653 ANSLFRLDKFDEACLLLQKIVD----FDLLLPGYQSLKEFLEPSATTCLKTQKIAESV-E 707
Query: 77 NSSVKMSAVANNSVLDA----LCNNGKFDEALKLF-DRMKNEHNPPKRLAVNLGSFNVMA 131
NS+ K V NN V + LC GK +A KLF D + ++ P ++ ++
Sbjct: 708 NSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEY-----TYTILI 762
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
G G A + +M P+ +++N LI LCK G + A+ L ++ KG
Sbjct: 763 HGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTT 822
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
P+ TY L+D + V + KM++ GL
Sbjct: 823 PNAITYNTLIDGLIKSGDVAEAMRLKEKMIEKGL 856
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
F+++ Y +G K+A+ VF MG+Y P LS N+L+ L K G A +Y +M
Sbjct: 158 FDMILKVYAEKGMVKNALHVFDNMGKYGRIPSLLSCNSLLSNLVKKGENFVALHVYDQMI 217
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDS-GLRPNLAVYNRLVGKLVQVGML 245
V+PD +T ++++A +VD + ++M +S GL N+ N L+ +G +
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGDV 277
Query: 246 DEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
+ +M ++ + + ++ ++K+ G ++E
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEE 314
>gi|242074484|ref|XP_002447178.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
gi|241938361|gb|EES11506.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
Length = 643
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 159/350 (45%), Gaps = 46/350 (13%)
Query: 9 DPVVYSYLMLGFVRDGDS-DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG------ 61
D V Y+ L+ G+ R G + DG+ RL +L+E+ + D V Y +LM+ ++ +G
Sbjct: 242 DVVSYNILIKGYCRAGRTQDGMSRL-ADLREQ-AELAPDKVTYLTLMQRHYSEGTFPQCI 299
Query: 62 -----MEEEAM------ECYNEAVGENSS--------------VKMSAVANNSVLDALCN 96
MEE M Y +G S +K AN ++ AL +
Sbjct: 300 ALFQEMEERGMGKEIPQHAYVLVIGALSKDGKPFEALAVFERMLKRGCPANAAMYTALID 359
Query: 97 N----GKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE 152
+ G+ EA+ LF+RMK + ++ ++ V+ + C G ++A+ FR E
Sbjct: 360 SMGKLGREKEAMALFERMKASG-----IELDAVTYGVIVNCLCRFGNMEEALSCFRSCVE 414
Query: 153 YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDD 212
+ + + + +LID K GM+ +A+EL+ EM KG PD Y Y +L+DA + R D
Sbjct: 415 KGVAVNAIFYTSLIDGFGKTGMVDQAKELFEEMIAKGFVPDSYCYNVLIDALVKAGRTDI 474
Query: 213 GATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMK 271
++ +M D G + Y L+ L + +EA F+D M+ K + A+++ +
Sbjct: 475 ACAFYERMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRVLAN 534
Query: 272 ALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKL 321
L GK I+ + G I E E + L K GR ++ KL
Sbjct: 535 GLCLSGKFSRAWRILDELAPMGVI--PETAHEDMINVLCKTGRFKQACKL 582
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 117/247 (47%), Gaps = 10/247 (4%)
Query: 51 GSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM 110
SL++ G+ EE + + + V+ S + N +LD L N G D A+ +FD M
Sbjct: 176 ASLIRSLAAFGLSEELLWAWQAM--RLAGVEPSRLTYNCLLDGLVNAGLLDTAINVFDAM 233
Query: 111 KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY-RCSPDTLSFNNLIDQL 169
E R+ ++ S+N++ GYC GR +D + + E +PD +++ L+ +
Sbjct: 234 STE----DRVRPDVVSYNILIKGYCRAGRTQDGMSRLADLREQAELAPDKVTYLTLMQRH 289
Query: 170 CKNGMLAEAEELYGEMSDKGVNPD--EYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRP 227
G + L+ EM ++G+ + ++ Y L++ A + + + F +M+ G
Sbjct: 290 YSEGTFPQCIALFQEMEERGMGKEIPQHAYVLVIGALSKDGKPFEALAVFERMLKRGCPA 349
Query: 228 NLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
N A+Y L+ + ++G EA + F+ M +++D +Y ++ L G ++E L
Sbjct: 350 NAAMYTALIDSMGKLGREKEAMALFERMKASGIELDAVTYGVIVNCLCRFGNMEEALSCF 409
Query: 287 GGILDDG 293
++ G
Sbjct: 410 RSCVEKG 416
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 7/237 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N VL+A+C+ G D+AL L + + P ++ S+N + G C R+ E+
Sbjct: 196 NLVLNAICDQGSVDKALHLLRDLPSFGCEP-----DVVSYNAVLKGLCMAKRWGCVQELM 250
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M C P+ ++FN LI LC+NG+ E+ +M++ G PD Y ++D +
Sbjct: 251 EEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKE 310
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASY 266
+ +M GL+PN+ YN L+ L +E + M K +DD ++
Sbjct: 311 GHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTF 370
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
++ G +D ++E++ +L G + + G KEG +E V L++
Sbjct: 371 NILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVING-FCKEGLIDEAVMLLK 426
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 139/323 (43%), Gaps = 46/323 (14%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
MF K D V ++ L+ F ++G D V L E++ + G + D + Y +++ G+
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML--VHGCMPDVITYTTVINGF--- 412
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
C G DEA+ L M P
Sbjct: 413 ----------------------------------CKEGLIDEAVMLLKSMTACGCKP--- 435
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N S+ ++ G C R+ DA ++ +M + C + ++FN LI+ LCK G++ +A E
Sbjct: 436 --NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 493
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M G +PD +Y ++D + + D+ MV+ G+ PN +Y+ + L
Sbjct: 494 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 553
Query: 241 QVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G +++ FD I ++ D Y ++ +L G+ + +E + ++ G +
Sbjct: 554 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 613
Query: 300 ELQEFVKGELSKEGREEEVVKLM 322
++G L+ EG +E +++
Sbjct: 614 TYTILIRG-LASEGFVKEAQEML 635
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 146/357 (40%), Gaps = 50/357 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ G V L EE+ + V + +L+ G+ E
Sbjct: 222 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM--ACPPNIVTFNTLISYLCRNGLFE 279
Query: 65 EAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
E + G ++M A +++D +C G A ++ +RM P L
Sbjct: 280 RVHEVLAQMAEHGCTPDIRMYA----TIIDGICKEGHLKVAHEILNRM-----PSYGLKP 330
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N+ +N + G C R+++ E+ +M + C D ++FN L+D C+NG++ EL
Sbjct: 331 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELL 390
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVY---------- 232
+M G PD TY +++ + +D+ + M G +PN Y
Sbjct: 391 EQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSA 450
Query: 233 -------------------------NRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASY 266
N L+ L + G++++A ++V D SY
Sbjct: 451 ERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 510
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
++ L GK DE LE++ ++ + G+ + + + LS+EGR +V+++ +
Sbjct: 511 STVIDGLGKAGKTDEALELL-NVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 104/269 (38%), Gaps = 13/269 (4%)
Query: 50 YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR 109
Y +++ GY G E A + V +A V+ ALC G+ +AL + D
Sbjct: 93 YNAMVAGYCRAGQLESA-----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDE 147
Query: 110 MKNEHNPPKRLAVNLGS-FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ 168
M P+R + ++V+ + C G F+ A+ V + C+ D + N +++
Sbjct: 148 M------PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNA 201
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
+C G + +A L ++ G PD +Y ++ R +MV PN
Sbjct: 202 ICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPN 261
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVG 287
+ +N L+ L + G+ + M + D Y ++ + G L EI+
Sbjct: 262 IVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILN 321
Query: 288 GILDDGGIEFSEELQEFVKGELSKEGREE 316
+ G +KG S E EE
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAERWEE 350
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 15/267 (5%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
+ D V ++ L+ + G + + + EK GV + V Y SLM GY ++ E
Sbjct: 6 IMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEK--GVEPNTVTYSSLMNGYLLQNRVFE 63
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A + +N + ++ N +++ C + DEA ++FD M P N
Sbjct: 64 ARKVFNAMITRGCIP--DVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIP-----NTA 116
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
++N + G+ +K I++F+ M CSPD ++++ + L K G L +A EL+ EM
Sbjct: 117 TYNTLLGGF-----WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREM 171
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
+ +NPD Y +L+DA + +++D F K+ GL P++ + ++ L + G+L
Sbjct: 172 QNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLL 231
Query: 246 DEA-KSFFDIMVKKLKMDDASYKFMMK 271
DEA K+F + D SY +++
Sbjct: 232 DEAYKAFRQMERDGCPPDCCSYNVIVR 258
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + Y+ L+ GF + +LF+++ + G D V Y + G +
Sbjct: 106 MSFRGLIPNTATYNTLLGGFWKQK-----IQLFKDMHAQ--GCSPDLVTYSIFLHGLSKQ 158
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++A+E + E +N+ + V N ++DA+C +GK ++A +LF ++ K L
Sbjct: 159 GYLDQALELFREM--QNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLH-----VKGL 211
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ S+ + G C +G +A + FR+M C PD S+N ++ +N + AE+
Sbjct: 212 LPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQ 271
Query: 181 LYGEMSDKGVNPDEYTYGLLMD 202
L+ EM D+G + D T L D
Sbjct: 272 LFQEMFDRGFSADALTRTLAAD 293
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 150 MGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNR 209
M + PD ++FN L+D LCK G ++EA+ + M +KGV P+ TY LM+ NR
Sbjct: 1 MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNR 60
Query: 210 VDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDDASYKF 268
V + F M+ G P++ YN L+ + +DEAK FD M + L + A+Y
Sbjct: 61 VFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNT 120
Query: 269 MMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEKKE 326
++ GG + +++ + G F+ G LSK+G ++ ++L + +
Sbjct: 121 LL-----GGFWKQKIQLFKDMHAQGCSPDLVTYSIFLHG-LSKQGYLDQALELFREMQ 172
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 131/314 (41%), Gaps = 46/314 (14%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+GF + V Y L+ G + G++ V RL +L
Sbjct: 162 QGFQLNQVSYRTLINGLCKTGETKAVARLLRKL--------------------------- 194
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E SVK V N+++ +LC N +A L+ M K ++ N
Sbjct: 195 ------------EGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI-----VKGISPN 237
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + G+C G K+A + +M +PD +FN LID L K G + A+ +
Sbjct: 238 VVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLA 297
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M + PD TY L+D F +N+V + F M SG+ PN+ Y ++ L +
Sbjct: 298 VMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEK 357
Query: 244 MLDEAKSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQ 302
M+DEA S F+ M K + D +Y ++ L L+ + + + + GI+
Sbjct: 358 MVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKK-MKEQGIQPDVYSY 416
Query: 303 EFVKGELSKEGREE 316
+ L K GR E
Sbjct: 417 TILLDALCKGGRLE 430
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 10/274 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M VKG + V Y+ L+ GF G F L E+K L + D + +L+ +
Sbjct: 229 MIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMK--LKNINPDVCTFNTLIDALGKE 286
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A AV + +K V NS++D K A +F M P
Sbjct: 287 GKMKAAKIVL--AVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTP--- 341
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ ++ M DG C + +A+ +F +M PD +++ +LID LCKN L A
Sbjct: 342 --NVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIA 399
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L +M ++G+ PD Y+Y +L+DA + R+++ +F++++ G N+ YN ++ L
Sbjct: 400 LCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLC 459
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKAL 273
+ + EA M K M DA ++K ++ AL
Sbjct: 460 KADLFGEAMDLKSKMEGKGCMPDAITFKTIICAL 493
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 5/176 (2%)
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
AV + +K V +++D + A +F M P N+ + +M D
Sbjct: 530 AVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTP-----NVQCYTIMID 584
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G C + +A+ +F +M P+ +++ +LID LCKN L A L EM + G+ P
Sbjct: 585 GLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQP 644
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
D Y+Y +L+D + R++ F++++ G N+ VY ++ +L + G+ DEA
Sbjct: 645 DVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEA 700
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 9/218 (4%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
D V Y LM G+ + +F + + GV + Y ++ G K +EAM
Sbjct: 539 PDVVTYGTLMDGYFLVNELKHAKYVFYSMAQM--GVTPNVQCYTIMIDGLCKKKTVDEAM 596
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ E +N + V S++DALC N + A+ L MK P ++ S+
Sbjct: 597 SLFEEMKHKNMFPNI--VTYTSLIDALCKNHHLERAIALLKEMKEHGIQP-----DVYSY 649
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
++ DG C GR + A E+F+++ + + +I++LCK G+ EA +L +M D
Sbjct: 650 TILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMED 709
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
KG PD T+ +++ A FE + D +M+ GL
Sbjct: 710 KGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 91/200 (45%), Gaps = 6/200 (3%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +L +L NN + + LF + ++ P +L + N++ + +C A V
Sbjct: 67 NYILSSLVNNKHYPTVISLFKKFESNGATP-----DLCTLNILMNCFCHLTHITFAFSVL 121
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+ + P+ ++ N LI LC G + +A + ++ +G ++ +Y L++ +
Sbjct: 122 ANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKT 181
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASY 266
A RK+ ++P++ +YN ++ L + +L +A + +++VK + + +Y
Sbjct: 182 GETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTY 241
Query: 267 KFMMKALSDGGKLDEILEIV 286
++ G L E ++
Sbjct: 242 NALVYGFCIMGHLKEAFSLL 261
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Query: 143 AIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMD 202
A+ F +M R P T FN ++ L N L+ + G PD T +LM+
Sbjct: 47 AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106
Query: 203 ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKM 261
+ + + ++ G PN N L+ L G + +A F D +V + ++
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166
Query: 262 DDASYKFMMKALSDGG 277
+ SY+ ++ L G
Sbjct: 167 NQVSYRTLINGLCKTG 182
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 13/141 (9%)
Query: 107 FDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLI 166
FDRM PP FN + + I +F+K +PD + N L+
Sbjct: 51 FDRMLLMRPPPPTF-----HFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILM 105
Query: 167 DQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CF--EVNRVDDGATYFR-KMVD 222
+ C + A + + +G +P+ T L+ CF E+ + A YF ++V
Sbjct: 106 NCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKK----ALYFHDQVVA 161
Query: 223 SGLRPNLAVYNRLVGKLVQVG 243
G + N Y L+ L + G
Sbjct: 162 QGFQLNQVSYRTLINGLCKTG 182
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 155/330 (46%), Gaps = 23/330 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGV-----VYGSLMK 55
M KG + +Y L+ G+ G ++++ L ++ DG+ + L+
Sbjct: 334 MVRKGQKPNSTIYHILLHGYATKGA-------LIDVRDLLDLMIRDGIPFEHRAFNILIC 386
Query: 56 GYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
Y G ++AM + E + ++ V+ ++V+ LC G+ ++A+ F++M +E
Sbjct: 387 AYAKHGAVDKAMTAFTEM--RQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGL 444
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P N+ SF + G C G +K E+ +M PD + N ++D LCK G +
Sbjct: 445 SP-----NIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 499
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
EA++ + + GV P+ +Y L+D CF V ++D+ F +MV GLRP+ YN
Sbjct: 500 VEAQDFFDMVIHIGVKPNVVSYNTLIDGYCF-VGKMDESIKQFDRMVSIGLRPDSWTYNA 558
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L+ + G +++A + + M +K +K + ++ L G++ E+ ++D
Sbjct: 559 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDR- 617
Query: 294 GIEFSEELQEFVKGELSKEGREEEVVKLME 323
G + E V G L + +E +++ E
Sbjct: 618 GTQLRIETYNTVLGGLCENSCVDEALRMFE 647
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 131/282 (46%), Gaps = 10/282 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y L+ + + G +F+ + K G + +Y L+ GY KG
Sbjct: 303 GLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRK--GQKPNSTIYHILLHGYATKGALI 360
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+ + + + + + A N ++ A +G D+A+ F M+ P ++
Sbjct: 361 DVRDLLDLMIRD--GIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRP-----DV 413
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S++ + C GR +DA+ F +M SP+ +SF +LI LC G + EEL E
Sbjct: 414 VSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFE 473
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M ++G++PD +MD + RV + +F ++ G++PN+ YN L+ VG
Sbjct: 474 MINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGK 533
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+DE+ FD MV L+ D +Y ++ G++++ L +
Sbjct: 534 MDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALAL 575
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 151/350 (43%), Gaps = 45/350 (12%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVV-YGSLMKGYFMKGME 63
G+ D Y+ L+ G + S L + G S VV Y +++ G+F +G
Sbjct: 160 GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEV 219
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
++A ++E +G+ V +S++D LC ++A + M ++ P N
Sbjct: 220 DKAYFLFDEMIGQ--GFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMP-----N 272
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++N+M GYC G+ ++A+ + +KM PD +++ LI CK G AEA ++
Sbjct: 273 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFD 332
Query: 184 EMSDKGVNPDEYTYGLLMD------ACFEVN----------------------------- 208
M KG P+ Y +L+ A +V
Sbjct: 333 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHG 392
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYK 267
VD T F +M +GLRP++ Y+ ++ L ++G +++A F+ MV + L + S+
Sbjct: 393 AVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFT 452
Query: 268 FMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
++ L G+ ++ E+ +++ GI + L KEGR E
Sbjct: 453 SLIHGLCSIGEWKKVEELAFEMINR-GIHPDAIFMNTIMDNLCKEGRVVE 501
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 139/318 (43%), Gaps = 55/318 (17%)
Query: 5 GFVADPVVYSYLMLGFVRDGD-SDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYF----M 59
G D V YS ++ + G D V+ + + E G+ + + + SL+ G
Sbjct: 408 GLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSE---GLSPNIISFTSLIHGLCSIGEW 464
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
K +EE A E N + + A+ N+++D LC G+ EA FD + + P
Sbjct: 465 KKVEELAFEMINRGIHPD------AIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKP-- 516
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N+ S+N + DGYC G+ ++I+ F +M PD+ ++N L++ KNG + +A
Sbjct: 517 ---NVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDAL 573
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG-- 237
LY EM K V T +++ F+ R+ + KMVD G + + YN ++G
Sbjct: 574 ALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGL 633
Query: 238 ---------------------------------KLVQVGMLDEAKSFFDIMVKKLKMDDA 264
L++VG +DEAKS F MV + +
Sbjct: 634 CENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHV 693
Query: 265 -SYKFMMKALSDGGKLDE 281
+Y M+K+ + G L+E
Sbjct: 694 ITYSLMIKSRIEEGLLEE 711
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 9/248 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ L+ G+ G D + F+ + G+ D Y +L+ GYF G E
Sbjct: 513 GVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSI--GLRPDSWTYNALLNGYFKNGRVE 570
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A+ Y E ++ VK A+ +N +L L G+ A +L+ +M + + + +
Sbjct: 571 DALALYREMFRKD--VKFCAITSNIILHGLFQAGRIVAARELYMKMVD-----RGTQLRI 623
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
++N + G C +A+ +F + D +FN +I+ L K G + EA+ L+
Sbjct: 624 ETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSA 683
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M +G P TY L++ + E +++ F M +G + + N ++ +L++ G
Sbjct: 684 MVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGD 743
Query: 245 LDEAKSFF 252
+ A ++
Sbjct: 744 VRRAGTYL 751
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 9/220 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D Y+ L+ G+ ++G + L+ E+ K V + ++ G F
Sbjct: 544 MVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRK--DVKFCAITSNIILHGLFQA 601
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A E Y + V + +++ N+VL LC N DEAL++F+ +++ K
Sbjct: 602 GRIVAARELYMKMVDRGTQLRIETY--NTVLGGLCENSCVDEALRMFEDLRS-----KEF 654
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++ +FN++ + GR +A +F M P ++++ +I + G+L E+++
Sbjct: 655 ELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDD 714
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
L+ M G D + +++ E V TY K+
Sbjct: 715 LFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKI 754
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 157/343 (45%), Gaps = 31/343 (9%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KGFV D Y+ ++ + + F LF+E+K GV D Y L+ +
Sbjct: 443 MMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKR--AGVNPDVYTYTILIDSFCKA 500
Query: 61 GMEEEAMECYNE--AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPK 118
G+ E+A ++E +VG + +V V ++L A + + +A +F RM + P
Sbjct: 501 GLIEQARSWFDEMRSVGCSPNV----VTYTALLHAYLKSKQLIQAHDIFHRMVDAACYP- 555
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM--------------GEYRCS--PDTLSF 162
N +++ + DG C G + A EV+ K+ G C+ P+ +++
Sbjct: 556 ----NAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTY 611
Query: 163 NNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVD 222
LID LCK +++A EL M G P++ Y L+D ++ ++D+ F +M
Sbjct: 612 GALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTK 671
Query: 223 SGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
G P++ Y L+ ++ + G LD A K +++ + +Y M+ LS G++++
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEK 731
Query: 282 ILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
L ++ + + G + G L K G+ + +KL ++
Sbjct: 732 ALNLLSLMEEKGCSPNVVTYTALIDG-LGKTGKADASLKLFKQ 773
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 37 KEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCN 96
+ + + + V Y +L+ G+ K N + E + S NS++ CN
Sbjct: 296 RMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLF--NSLVHGYCN 353
Query: 97 NGKFDEALKLFDRMKNEHNPPKRLAVNL--GS------------FNVMADGY-------- 134
G + A KLF+RM +PP +A N+ GS +++ Y
Sbjct: 354 AGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASC 413
Query: 135 --------------CGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
CG G+F+ A ++ ++M PDT ++ +I LC+ + ++
Sbjct: 414 VLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFL 473
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM GVNPD YTY +L+D+ + ++ ++F +M G PN+ Y L+ +
Sbjct: 474 LFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYL 533
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGG 294
+ L +A F MV +A +Y ++ L G++ + E+ ++ G
Sbjct: 534 KSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSG 588
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 126/292 (43%), Gaps = 22/292 (7%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + V Y+ L+ +++ +F + + + V Y +L+ G G +
Sbjct: 517 GCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVD--AACYPNAVTYSALIDGLCKAGEIQ 574
Query: 65 EAMECYNEAVG--------------ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRM 110
+A E Y + +G + ++ + V +++D LC K +A +L D M
Sbjct: 575 KACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAM 634
Query: 111 KNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLC 170
P ++ ++ + DG+C G+ +A EVF +M + P ++ +LID++
Sbjct: 635 LAAGCEPNQIV-----YDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMF 689
Query: 171 KNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLA 230
K+G L A ++ EM + NP+ TY ++D +V ++ M + G PN+
Sbjct: 690 KDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVV 749
Query: 231 VYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDE 281
Y L+ L + G D + F M K + +Y+ ++ G LDE
Sbjct: 750 TYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDE 801
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 21/261 (8%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDG--------------VVYGSLM 54
+ V YS L+ G + G+ ++E+L G V SD V YG+L+
Sbjct: 556 NAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALI 615
Query: 55 KGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH 114
G +A E + + + + + + ++++D C GK D A ++F RM
Sbjct: 616 DGLCKAQKVSDAHELLDAMLA--AGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCG 673
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
P ++ ++ + D GR A++V +M C+P+ +++ +ID L K G
Sbjct: 674 YLP-----SVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGE 728
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+ +A L M +KG +P+ TY L+D + + D F++M G PN Y
Sbjct: 729 IEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRV 788
Query: 235 LVGKLVQVGMLDEAKSFFDIM 255
L+ G+LDEA D M
Sbjct: 789 LINHCCAAGLLDEAHLLLDEM 809
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 110/241 (45%), Gaps = 14/241 (5%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ G + G+ + L ++EK G + V Y +L+ G G + +++ +
Sbjct: 714 VTYTAMIDGLSKVGEIEKALNLLSLMEEK--GCSPNVVTYTALIDGLGKTGKADASLKLF 771
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ + + V +++ C G DEA L D MK+ H P +L ++
Sbjct: 772 KQM--NSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPK-----HLQGYHCA 824
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGV 190
G+ +F ++ + +M + P + LID K G L A EL+ E+ +
Sbjct: 825 VQGF--SKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSS 882
Query: 191 NPDEYTYGL---LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
+ + + G+ L+ A ++V++ T + +M G+ P+L V+ LV L++V DE
Sbjct: 883 SLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDE 942
Query: 248 A 248
A
Sbjct: 943 A 943
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 3/129 (2%)
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
NV+ C G + +A+E ++ ++ P +++N L+ L G + + EMS
Sbjct: 172 LNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMS 231
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLD 246
G D T G A +V R D K + + +++ L++ + +
Sbjct: 232 ASGFCMDRSTIGYFAQALCKVGRWADALNMLEK---EDFNLDTVLCTQMISGLMEASLFN 288
Query: 247 EAKSFFDIM 255
EA SF M
Sbjct: 289 EAMSFLHRM 297
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 65/176 (36%), Gaps = 8/176 (4%)
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRF 140
+ SAV N+++ L + G+ + ++ M ++ + A C GR+
Sbjct: 201 RPSAVTYNALVQVLASAGQVEMGFRVQKEMS-----ASGFCMDRSTIGYFAQALCKVGRW 255
Query: 141 KDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLL 200
DA+ + K + DT+ +I L + + EA M P+ TY L
Sbjct: 256 ADALNMLEKEDF---NLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTL 312
Query: 201 MDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
+ + + M+ G PN +++N LV G A F+ M
Sbjct: 313 LSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMT 368
>gi|15228903|ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
gi|7670019|dbj|BAA94973.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332642359|gb|AEE75880.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 147/324 (45%), Gaps = 24/324 (7%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G++ D ++ M ++ D R+F+ G VS GV G GY + +
Sbjct: 349 RGYIPDSSTFNAAMSCLLKGHDLVETCRIFD-------GFVSRGVKPG--FNGYLV--LV 397
Query: 64 EEAMECYNEAVGENSSVKM-------SAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
+ + + G+ +M S + N+V+D LC + + A M++
Sbjct: 398 QALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGIS 457
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P NL +FN GY +G K V K+ + PD ++F+ +I+ LC+ +
Sbjct: 458 P-----NLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIK 512
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
+A + + EM + G+ P+E TY +L+ +C D F KM ++GL P+L YN +
Sbjct: 513 DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
++ + +A+ M++ LK D+ +Y ++KALS+ G+ E E+ I G +
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCV 632
Query: 296 EFSEELQEFVKGELSKEGREEEVV 319
S + + +L K G E V
Sbjct: 633 PDSYTKRLVEELDLRKSGLSRETV 656
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 79/200 (39%), Gaps = 44/200 (22%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+ V GF D + +S ++ R + F F+E+ E G+ + + Y L++
Sbjct: 486 LLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLE--WGIEPNEITYNILIR----- 538
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ C+ G D ++KLF +MK P
Sbjct: 539 --------------------------------SCCSTGDTDRSVKLFAKMKENGLSP--- 563
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+L ++N +C + K A E+ + M PD +++ LI L ++G +EA E
Sbjct: 564 --DLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEARE 621
Query: 181 LYGEMSDKGVNPDEYTYGLL 200
++ + G PD YT L+
Sbjct: 622 MFSSIERHGCVPDSYTKRLV 641
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
+VF ++ P T +N +ID L K+ L A + +M G PD +TY +L+
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-VKKLKMDD 263
+ VD+ ++M G RPN+ Y L+ + G +DEA ++M V+KL ++
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 264 ASYKFMMKAL 273
A+ + + +
Sbjct: 286 ATIRTFVHGI 295
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 15/200 (7%)
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P RL +N + D A F++M C PD ++N LI +CK G++
Sbjct: 178 PSTRL------YNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVV 231
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
EA L +M +G P+ +TY +L+D RVD+ M L PN A
Sbjct: 232 DEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTF 291
Query: 236 VGKLVQVGMLDEAKSF---FDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
V + + L K+F M K + Y ++ LS+ E + + I +
Sbjct: 292 VHGIFRC--LPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGER 349
Query: 293 GGIE----FSEELQEFVKGE 308
G I F+ + +KG
Sbjct: 350 GYIPDSSTFNAAMSCLLKGH 369
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 107/274 (39%), Gaps = 34/274 (12%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
+Y+ ++ V+ D + F++++ G D Y L+ G KG+ +EA+
Sbjct: 182 LYNAVIDALVKSNSLDLAYLKFQQMRSD--GCKPDRFTYNILIHGVCKKGVVDEAIRLVK 239
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEHN---------- 115
+ E + + ++D G+ DEALK + M+ NE
Sbjct: 240 QM--EQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
Query: 116 --PP-KRLAV---------NLGSFNVMADGYC--GQGRFKDAIEVFRKMGEYRCSPDTLS 161
PP K V NL A YC K+ + RK+GE PD+ +
Sbjct: 298 CLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSST 357
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
FN + L K L E ++ +GV P Y +L+ A R +G Y ++M
Sbjct: 358 FNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMG 417
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
GL ++ YN ++ L + ++ A F M
Sbjct: 418 VDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEM 451
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+K S N+V+DAL + D A F +M+++ P R ++N++ G C +G
Sbjct: 176 MKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRF-----TYNILIHGVCKKGV 230
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+AI + ++M + P+ ++ LID G + EA + M + +NP+E T
Sbjct: 231 VDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRT 290
Query: 200 LMDACFE 206
+ F
Sbjct: 291 FVHGIFR 297
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 85/191 (44%), Gaps = 18/191 (9%)
Query: 110 MKNEHNPPKRLAVNLGSFN-------------VMADGYCGQGRFKDAIEVFRKMGE--YR 154
++N+ NP L L N V+ + +G ++E+ +++ + YR
Sbjct: 83 LQNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYR 142
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
S + + LI + G+ +++ ++S G+ P Y ++DA + N +D
Sbjct: 143 ISDELMCV--LIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAY 200
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKAL 273
F++M G +P+ YN L+ + + G++DEA M ++ + +Y ++
Sbjct: 201 LKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGF 260
Query: 274 SDGGKLDEILE 284
G++DE L+
Sbjct: 261 LIAGRVDEALK 271
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 116/236 (49%), Gaps = 9/236 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + + ++ L+ F + GD G L+ E++ + G+ D V + + + G +
Sbjct: 537 MIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR--GIFPDVVAFSAFIDGLSKQ 594
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G+ EEA + E + + + A NS++ C GK +EALKL M++ + L
Sbjct: 595 GLVEEAYNVFLEML--RKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRH-----RGL 647
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + N++ G C QGR + AI VF M + SPD +++N LI+ CK + A+
Sbjct: 648 LPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADN 707
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
L M G NPD TY + + R++ ++V +G+ PN YN ++
Sbjct: 708 LVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSML 763
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 161/322 (50%), Gaps = 19/322 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF + ++Y+ LM G+V+ + D L+EE+++K G+ DG+ + L+ G++ G EE
Sbjct: 366 GFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKK--GIAPDGITFNILVSGHYKYGREE 423
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLD----ALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+ + + ++ SV + + + S+ D LC G+ DEA++ M + P +
Sbjct: 424 DG-----DRLLKDISV-LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSII 477
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A FN + Y G A E ++ M + +P + ++L+ L NG L EA E
Sbjct: 478 A-----FNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATE 532
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L G+M +KG++ + + +L+D F+ V + + +M G+ P++ ++ + L
Sbjct: 533 LIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLS 592
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ G+++EA + F M++K L ++ +Y ++ GKL+E L++ ++ G+
Sbjct: 593 KQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL-EKVMRHRGLLPDI 651
Query: 300 ELQEFVKGELSKEGREEEVVKL 321
+ G L K+GR + +
Sbjct: 652 FTTNMIIGGLCKQGRMRSAINV 673
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 141/307 (45%), Gaps = 17/307 (5%)
Query: 20 FVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKG---MEEEAMECYNEAVGE 76
+R GD V++LF+++ + G + ++ G+ KG + E + + E
Sbjct: 241 LLRVGDYGNVWKLFKDVIRR--GPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCE 298
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
+ A A N V++A C G+ +AL F+ M P + +FN + + +C
Sbjct: 299 PN-----AFAYNIVINACCIRGRTSDALAWFNLMIERGCNP-----TVVTFNTVINAFCK 348
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
+G +A ++F + E SP+ + +N L++ K + +A LY EM KG+ PD T
Sbjct: 349 EGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGIT 408
Query: 197 YGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIM 255
+ +L+ ++ R +DG + + GL P+ ++++ V L G LDEA F D++
Sbjct: 409 FNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDML 468
Query: 256 VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
K L ++ ++ A S G D+ E ++ G + G LS GR
Sbjct: 469 EKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMG-LSINGRL 527
Query: 316 EEVVKLM 322
+E +L+
Sbjct: 528 QEATELI 534
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 125/269 (46%), Gaps = 10/269 (3%)
Query: 3 VKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGM 62
V G + D ++ + G G D ++ EK G+ + + S++ Y G+
Sbjct: 434 VLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEK--GLSPSIIAFNSVIAAYSQAGL 491
Query: 63 EEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAV 122
E++A E Y V + + S +S+L L NG+ EA +L +M K L+V
Sbjct: 492 EDKAFEAYKLMV--HFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIE-----KGLSV 544
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
N +F V+ D + +G A ++ +M PD ++F+ ID L K G++ EA ++
Sbjct: 545 NNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVF 604
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
EM KG+ P+ + Y L+ + ++++ + M GL P++ N ++G L +
Sbjct: 605 LEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQ 664
Query: 243 GMLDEAKS-FFDIMVKKLKMDDASYKFMM 270
G + A + F D+ L D +Y ++
Sbjct: 665 GRMRSAINVFMDMHQTGLSPDIITYNTLI 693
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D V +S + G + G + + +F E+ K G++ + Y SL+ G+ G
Sbjct: 575 RGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRK--GLIPNNFAYNSLICGFCKCGKL 632
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EA++ E V + + N ++ LC G+ A+ +F M P +
Sbjct: 633 NEALKL--EKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSP-----D 685
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N + +GYC +A + +M +PD ++N I C + + A +
Sbjct: 686 IITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLD 745
Query: 184 EMSDKGVNPDEYTYGLLMD-ACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
E+ G+ P+ TY +++ C ++ +D +++ PN+ N L+ + +
Sbjct: 746 ELVSAGIVPNTVTYNSMLNGVCSDI--LDRAMILTARLLKMAFVPNVVTANLLLSQFYKQ 803
Query: 243 GMLDEAKSF-FDIMVKKLKMDDASYKFMMKA 272
GM + + + D+ +YK M KA
Sbjct: 804 GMPERTLMWGHKLSEIPYAFDEITYKIMDKA 834
>gi|357127910|ref|XP_003565620.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Brachypodium distachyon]
Length = 1088
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 149/371 (40%), Gaps = 76/371 (20%)
Query: 22 RDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVK 81
R+G V L E+++K G++ D V Y SL+ GY G+ E + + + +
Sbjct: 214 REGKIGEVAELVSEMEQK--GMIGDAVFYSSLVHGYMTGGLLMEGLR--EHRLMLDKGIA 269
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFK 141
V +V+D +C G D+ + D M+ P NL ++ + G+C + R +
Sbjct: 270 ADVVNYTTVIDGMCREGSVDKVMGFLDEMERSGAKP-----NLITYTSLVGGFCKRNRLE 324
Query: 142 DAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP--------- 192
DA V RK+ + D ++ LID LCK G L +A L GEM KG+
Sbjct: 325 DAFSVVRKLEQKGVVVDEYVYSILIDSLCKMGDLDKAFCLLGEMEGKGIKAGTVTYNTVI 384
Query: 193 ---------------------DEYTYGLLMDAC--------------------------- 204
D +TY +L+ C
Sbjct: 385 DGLCKAGDTNNAIEISQGVAADNFTYSMLLHGCIKGEDSTGIMAIKSRLESSGIAVDVVT 444
Query: 205 --------FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV 256
F VN++DD + F +M D GL PN Y+ ++ + ++G + A FD
Sbjct: 445 CNILIKALFMVNKMDDACSLFHRMRDMGLSPNTVTYHTIINMMCKLGDIGRAVELFDEYK 504
Query: 257 KKLKMD-DASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGRE 315
K + A + ++ AL +GGK++ +I ++ S ++ + KEG E
Sbjct: 505 KDKSLSGTAVHNVLIGALCNGGKVNIAEQIFYDLIHKKLRPDSCTYRKLIHANF-KEGGE 563
Query: 316 EEVVKLMEKKE 326
+ V+ + K E
Sbjct: 564 QGVLNFIRKLE 574
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 115/257 (44%), Gaps = 20/257 (7%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G D +Y +++G G E+A++ + + + + +NSVL LC +G F
Sbjct: 714 GFSVDLAMYSIVVEGLCRGGYLEKALDLCETM--QKEGIHPTIIVHNSVLSGLCQHGCFT 771
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
EA +LFD +++ + P + ++ ++ C +G DA ++ +KM P T
Sbjct: 772 EAFRLFDYLESSNILPTII-----TYAILIGALCREGFLDDAYQLIQKMSNKGIRPTTRV 826
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKM 220
+N LI C G+ +A L + + PD +T G +++ C + N + +F +
Sbjct: 827 YNLLISGYCNYGLTEKALGLMSHFEEHFLLPDAFTLGSVINGHCLKGN-TEAALGFFNEY 885
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-----------SYKFM 269
+ P+ + LV L G ++E++ M + ++ D S +
Sbjct: 886 HCKEMVPDFVGFMSLVKGLYAKGRMEESRGILREMFQCKEIVDLINSVGNEVQTESLVAL 945
Query: 270 MKALSDGGKLDEILEIV 286
+ + + G++DE++ I+
Sbjct: 946 LSSACEEGRIDEVVTIL 962
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 11/217 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
GF D +YS ++ G R G + L E ++++ G+ +V+ S++ G G
Sbjct: 714 GFSVDLAMYSIVVEGLCRGGYLEKALDLCETMQKE--GIHPTIIVHNSVLSGLCQHGCFT 771
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH-NPPKRLAVN 123
EA ++ E+S++ + + ++ ALC G D+A +L +M N+ P R+
Sbjct: 772 EAFRLFDYL--ESSNILPTIITYAILIGALCREGFLDDAYQLIQKMSNKGIRPTTRV--- 826
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+N++ GYC G + A+ + E+ PD + ++I+ C G A +
Sbjct: 827 ---YNLLISGYCNYGLTEKALGLMSHFEEHFLLPDAFTLGSVINGHCLKGNTEAALGFFN 883
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
E K + PD + L+ + R+++ R+M
Sbjct: 884 EYHCKEMVPDFVGFMSLVKGLYAKGRMEESRGILREM 920
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 29/251 (11%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
+ Y+ L+ GF + + F + +L++K GVV D VY L+ G ++A
Sbjct: 308 ITYTSLVGGFCKRNRLEDAFSVVRKLEQK--GVVVDEYVYSILIDSLCKMGDLDKAFCLL 365
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNG---------------KFDEALKLFDRMKNEHN 115
E E +K V N+V+D LC G F ++ L +K E +
Sbjct: 366 GEM--EGKGIKAGTVTYNTVIDGLCKAGDTNNAIEISQGVAADNFTYSMLLHGCIKGEDS 423
Query: 116 P----------PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
+AV++ + N++ + DA +F +M + SP+T++++ +
Sbjct: 424 TGIMAIKSRLESSGIAVDVVTCNILIKALFMVNKMDDACSLFHRMRDMGLSPNTVTYHTI 483
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
I+ +CK G + A EL+ E + +L+ A +V+ F ++ L
Sbjct: 484 INMMCKLGDIGRAVELFDEYKKDKSLSGTAVHNVLIGALCNGGKVNIAEQIFYDLIHKKL 543
Query: 226 RPNLAVYNRLV 236
RP+ Y +L+
Sbjct: 544 RPDSCTYRKLI 554
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 107/270 (39%), Gaps = 32/270 (11%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
G V P Y ++ GD G ++F + E+ G D V +++ G+ G +
Sbjct: 124 HGAVLSPSTYHAMVSVLSDRGDMAGALKVFGIMTER--GCQVDDRVCSAIVSGFSKAGND 181
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKN----------- 112
+ +E Y+ E + + +V++ L GK E +L M+
Sbjct: 182 KAGLEFYDRVRKEVCGFEPGLMTLTAVVNLLGREGKIGEVAELVSEMEQKGMIGDAVFYS 241
Query: 113 -----------------EHNP--PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEY 153
EH K +A ++ ++ + DG C +G + +M
Sbjct: 242 SLVHGYMTGGLLMEGLREHRLMLDKGIAADVVNYTTVIDGMCREGSVDKVMGFLDEMERS 301
Query: 154 RCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDG 213
P+ +++ +L+ CK L +A + ++ KGV DEY Y +L+D+ ++ +D
Sbjct: 302 GAKPNLITYTSLVGGFCKRNRLEDAFSVVRKLEQKGVVVDEYVYSILIDSLCKMGDLDKA 361
Query: 214 ATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
+M G++ YN ++ L + G
Sbjct: 362 FCLLGEMEGKGIKAGTVTYNTVIDGLCKAG 391
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 122/251 (48%), Gaps = 10/251 (3%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
LF+E+ EK G+ ++ + Y L+ + +G + A+ ++ +S++ + NS++
Sbjct: 214 LFKEMGEK--GLCANHITYSILIDSFCRRGEMDNAIGFLDKMT--KASIEFTVYPYNSLI 269
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ C G A FD M + K L + ++ + GYC +G + A +V+ +M
Sbjct: 270 NGYCKLGNASAAKYYFDEMID-----KGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
SP+T +F +I LC+ M+AEA L+GEM ++ + P E TY ++++ +
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNIS 384
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMM 270
+ +MV G P+ Y L+ L VG + EAK F D + K K+++ Y ++
Sbjct: 385 EAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALV 444
Query: 271 KALSDGGKLDE 281
G+ +
Sbjct: 445 HGYCKEGRFKD 455
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 124/268 (46%), Gaps = 10/268 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG A+ + YS L+ F R G+ D +++ + + Y SL+ GY G
Sbjct: 221 KGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTK--ASIEFTVYPYNSLINGYCKLGNA 278
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
A ++E + + + + V S++ CN G++ +A K+++ M K ++ N
Sbjct: 279 SAAKYYFDEMI--DKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT-----AKGISPN 331
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+F + G C +AI +F +M E + P +++N +I+ C++G ++EA L
Sbjct: 332 TYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLD 391
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM KG PD YTY L+ V RV + + + + N Y+ LV + G
Sbjct: 392 EMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEG 451
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+A S +MV++ + MD Y ++
Sbjct: 452 RFKDAVSACRVMVERGVAMDLVCYAILI 479
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 151/357 (42%), Gaps = 43/357 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V Y+ L+ G+ +G+ F+++ E+ K G+ + + +++ G
Sbjct: 288 MIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAK--GISPNTYTFTAIISGLCRA 345
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
M EA+ + E + + S V N +++ C +G EA L D M + P
Sbjct: 346 NMMAEAIRLFGEM--KERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTY 403
Query: 121 A------------------------------VNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+N ++ + GYC +GRFKDA+ R M
Sbjct: 404 TYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVM 463
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG---EMSDKGVNPDEYTYGLLMDACFEV 207
E + D + + LID + + L+G EM + G+ PD Y ++D +
Sbjct: 464 VERGVAMDLVCYAILIDGTARE---HDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKA 520
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASY 266
+ + + MVD G PN+ Y L+ L + G++D+A+ + +V + + +Y
Sbjct: 521 GNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITY 580
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLME 323
+ L+ GG +++ +++ +L G + + ++G + G+ EE KL+
Sbjct: 581 GCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRG-FCRLGKIEEATKLLH 635
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 136/327 (41%), Gaps = 44/327 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + ++ ++ G R RLF E+KE+ ++ V Y +++G+
Sbjct: 323 MTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKER--KIMPSEVTYNVMIEGHCRS 380
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA +E VG+ ++ LC+ G+ EA + D + +H+
Sbjct: 381 GNISEAFHLLDEMVGK--GFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHH----- 433
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGE---------------------------- 152
+N ++ + GYC +GRFKDA+ R M E
Sbjct: 434 KLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFG 493
Query: 153 -------YRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACF 205
+ PD + + N+ID+ K G L EA L+ M D+G P+ TY L++
Sbjct: 494 LLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLC 553
Query: 206 EVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDAS 265
+ +D ++ + S + PN Y + L + G +++A M+K S
Sbjct: 554 KAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVS 613
Query: 266 YKFMMKALSDGGKLDEILEIVGGILDD 292
Y +++ GK++E +++ G+ D+
Sbjct: 614 YNILIRGFCRLGKIEEATKLLHGMTDN 640
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 33/257 (12%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V Y+ L+ G R+ D+ +F L +E+ G+ D V+Y +++ +
Sbjct: 463 MVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNH--GLRPDAVIYTNMIDRHSKA 520
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKL-------------- 106
G +EA ++ V E + V ++++ LC G D+A L
Sbjct: 521 GNLKEAFGLWDIMVDEGCLP--NVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHI 578
Query: 107 -----FDRMKN----------EHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
D + H K S+N++ G+C G+ ++A ++ M
Sbjct: 579 TYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMT 638
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ PD ++++ +I + CK L EA +L+ M DKG+ PD Y L+ C ++
Sbjct: 639 DNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELE 698
Query: 212 DGATYFRKMVDSGLRPN 228
+M+ G+R N
Sbjct: 699 KAFELRDEMIRRGMRSN 715
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 133/343 (38%), Gaps = 75/343 (21%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ ++ G R G+ F L +E+ K G V D Y L+ G G EA E
Sbjct: 368 VTYNVMIEGHCRSGNISEAFHLLDEMVGK--GFVPDTYTYRPLISGLCSVGRVSEAKEFV 425
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALK------------------------- 105
++ ++ K++ + ++++ C G+F +A+
Sbjct: 426 DDLHKDHH--KLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTA 483
Query: 106 -------LFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPD 158
LF +K HN R + + M D + G K+A ++ M + C P+
Sbjct: 484 REHDTRALFGLLKEMHNHGLRPDAVI--YTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPN 541
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA--------------- 203
+++ LI+ LCK G++ +AE L E V P+ TYG +D
Sbjct: 542 VVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHH 601
Query: 204 --------------------CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
C + ++++ M D+ + P+ Y+ ++ + +
Sbjct: 602 AMLKGFLATTVSYNILIRGFC-RLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRS 660
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
L EA + M+ K LK D +Y F++ G+L++ E+
Sbjct: 661 NLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFEL 703
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 120/280 (42%), Gaps = 29/280 (10%)
Query: 14 SYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY-----FMKGMEEEAME 68
S L+ G +R + V LF+++ V D +Y ++++ F K E
Sbjct: 100 SALLNGLLRFRRFNDVLLLFDDIVS--ANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWM 157
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
+N+ K+S V N ++ LC + + EAL++ + + K L N+ ++
Sbjct: 158 EFNQC-------KLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQ-----KGLEANVVTY- 204
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
G+F +A +F++MGE + ++++ LID C+ G + A +M+
Sbjct: 205 --------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKA 256
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
+ Y Y L++ ++ YF +M+D GL P + Y L+ G +A
Sbjct: 257 SIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKA 316
Query: 249 -KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVG 287
K + ++ K + + ++ ++ L + E + + G
Sbjct: 317 FKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFG 356
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 41/311 (13%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG V + V Y+ L+ G+ + G+ + ++LF++LK K G + +GSL+ G+ GM
Sbjct: 237 KGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMK--GFIPTLQTFGSLVNGFCKMGMF 294
Query: 64 EEA---------------MECYNEAV-----------GENSSVKMS-------AVANNSV 90
E ++ YN + +++ +MS V N++
Sbjct: 295 EAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTL 354
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
++ C+ G+ +EA KL ++ P +L ++ + GYC QG + A + +M
Sbjct: 355 INHFCSRGEVEEAEKLLEQTIRRGLAPNKL-----TYTPLVHGYCKQGEYTKATDYLIEM 409
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
D +S+ LI L G + A + M ++G+ PD Y +LM+ F+ ++
Sbjct: 410 STSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKL 469
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+M+D + P+ VY LV ++ G LDEAK F ++++K L Y M
Sbjct: 470 SMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVM 529
Query: 270 MKALSDGGKLD 280
+K S G +D
Sbjct: 530 IKGFSKSGMMD 540
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 10/276 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G D + Y L+ G V G+ D + + + + G++ D +Y LM G F K
Sbjct: 409 MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNR--GILPDANIYNVLMNGLFKK 466
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A E + +N + A +++D +G DEA KLF + K L
Sbjct: 467 GKLSMAKVMLTEMLDQN--IAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIE-----KGL 519
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ +NVM G+ G +AI KM PD +F+ +ID K + +
Sbjct: 520 DPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLK 579
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++G M + P+ TY L++ F M GL+P++ Y+ L+G
Sbjct: 580 IFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFC 639
Query: 241 QVGMLDEAKSFFDIM-VKKLKMDDASYKFMMKALSD 275
+ L +A S+F++M + K +DA++ +++ ++
Sbjct: 640 KEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTN 675
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 64 EEAMECYNEAVGENSS--VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLA 121
E A + Y+E + ++ + + + ++ LC G+ ++ +KL + + P
Sbjct: 186 ETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVP---- 241
Query: 122 VNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEEL 181
N+ +N + DGYC +G + A ++F+K+ P +F +L++ CK GM + L
Sbjct: 242 -NIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300
Query: 182 YGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQ 241
EM D+G++ + Y ++DA +++ ++M ++ P+L YN L+
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360
Query: 242 VGMLDEAKSFFDIMVKK 258
G ++EA+ + +++
Sbjct: 361 RGEVEEAEKLLEQTIRR 377
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 138/343 (40%), Gaps = 66/343 (19%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M + D VY+ L+ GF+R G+ D +LF+ + EK G+ V Y ++KG+
Sbjct: 479 MLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEK--GLDPGVVGYNVMIKGFSKS 536
Query: 61 GMEEEAMEC----------------------YNEAVGENSSVKM-----------SAVAN 87
GM + A+ C Y + N+ +K+ + V
Sbjct: 537 GMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTY 596
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
S+++ C G+ A KLF M++ P ++ +++++ +C + + A+ F
Sbjct: 597 TSLINGYCRKGETKMAEKLFSMMRSHGLKP-----SVVTYSILIGSFCKEAKLGKAVSYF 651
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
M +C+P+ +F+ L++ A + E N E + + D
Sbjct: 652 ELMLINKCTPNDAAFHYLVNGFTNTKATAVSRE--------PNNLHENSRSMFED----- 698
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASY 266
+F +M+ G A YN ++ L Q M+ A + M+ L D S+
Sbjct: 699 --------FFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSF 750
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFV 305
++ + G E ++ L++G +++S EL +F+
Sbjct: 751 VALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFI 793
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 14/167 (8%)
Query: 100 FDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCS-PD 158
F E + MK + P R A++ +V+ Y G A+EV+ + + S P
Sbjct: 114 FPEIEFTLEEMKTKETIPTREALS----DVLC-AYADVGLVDKALEVYHGVVKLHNSLPS 168
Query: 159 TLSFNNLIDQLCKNGMLAEAEELYGEMSDK----GVNPDEYTYGLLMDACFEVNRVDDGA 214
T + N+L++ L K+ + A +LY EM D+ + D YT +++ R++DG
Sbjct: 169 TYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGI 228
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKM 261
G PN+ YN L+ + G ++ A F KKLKM
Sbjct: 229 KLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLF----KKLKM 271
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 153/306 (50%), Gaps = 15/306 (4%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
++ L+ GF +D + G ++F+E+ ++ V + + Y SL+ G G EA+
Sbjct: 297 TTFNILIDGFWKDDNLPGSMKVFKEMLDQ--DVKPNVISYNSLINGLCNGGKISEAISMR 354
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN-PPKRLAVNLGSFNV 129
++ V ++ V+ + + N++++ C N EAL +F +K + P R+ +N+
Sbjct: 355 DKMV--SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM------YNM 406
Query: 130 MADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG 189
+ D YC G+ D + +M PD ++N LI LC+NG + A++L+ +++ KG
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 190 VNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAK 249
+ PD T+ +LM+ A ++M GL+P YN ++ + G L A
Sbjct: 467 L-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAAT 525
Query: 250 SFFDIMVK--KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKG 307
+ M K +L+M+ ASY +++ S GKL++ ++ +L+ G + + E VK
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP-NRITYEIVKE 584
Query: 308 ELSKEG 313
E+ +G
Sbjct: 585 EMVDQG 590
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 10/242 (4%)
Query: 39 KLGGVVSDGVVYGSLMKGYFM---KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALC 95
K+ G + V Y +L+ GY G +A E V + S ++ N ++D
Sbjct: 250 KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTF--NILIDGFW 307
Query: 96 NNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
+ ++K+F M ++ P N+ S+N + +G C G+ +AI + KM
Sbjct: 308 KDDNLPGSMKVFKEMLDQDVKP-----NVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
P+ +++N LI+ CKN ML EA +++G + +G P Y +L+DA ++ ++DDG
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSD 275
+M G+ P++ YN L+ L + G ++ AK FD + K D ++ +M+
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCR 482
Query: 276 GG 277
G
Sbjct: 483 KG 484
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC---GQGRFKDAI 144
N V++ALC GK ++A + + MK P N+ S+N + DGYC G G+ A
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSP-----NVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 145 EVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDAC 204
V ++M E SP+ +FN LID K+ L + +++ EM D+ V P+ +Y L++
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 205 FEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-----VKKL 259
++ + + KMV +G++PNL YN L+ + ML EA F + V
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 401
Query: 260 KMDDASYKFMMKALSDGGKLDE 281
+M Y ++ A GK+D+
Sbjct: 402 RM----YNMLIDAYCKLGKIDD 419
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G V D Y+ L+ G R+G+ + +LF++L K + D V + LM+GY KG
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK---GLPDLVTFHILMEGYCRKGESR 487
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
+A E +K + N V+ C G A + +M+ E +RL +N+
Sbjct: 488 KAAMLLKEM--SKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE----RRLRMNV 541
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
S+NV+ GY +G+ +DA + +M E P+ +++ + +++ G + + E
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIE 596
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 29/230 (12%)
Query: 3 VKGFVADPVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
VKG A P Y ML + + G D F L EE++ + G+V D Y L+ G
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE--GIVPDVGTYNCLIAGLCRN 449
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A + +++ + V + +++ C G+ +A L M P+ L
Sbjct: 450 GNIEAAKKLFDQLTSKGLP---DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHL 506
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKM-GEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
++N++ GYC +G K A + +M E R + S+N L+ + G L +A
Sbjct: 507 -----TYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
L EM +KG+ P+ TY ++ + +MVD G P++
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVKE----------------EMVDQGFVPDI 595
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 104/268 (38%), Gaps = 47/268 (17%)
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFR 148
S LD NG + +F + N + VN +++ Y RF+ E F+
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDN----VCVNSIIADMLVLAYANNSRFELGFEAFK 177
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
+ G Y LS L+ L K A+ E +Y EM + + P+ +T+ ++++A +
Sbjct: 178 RSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTG 237
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG----------MLDEAK--------S 250
+++ M G PN+ YN L+ ++G +L E +
Sbjct: 238 KMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLT 297
Query: 251 FFDIMVKKLKMDD---------------------ASYKFMMKALSDGGKLDEIL----EI 285
F+I++ DD SY ++ L +GGK+ E + ++
Sbjct: 298 TFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKM 357
Query: 286 VGGILDDGGIEFSEELQEFVKGELSKEG 313
V + I ++ + F K ++ KE
Sbjct: 358 VSAGVQPNLITYNALINGFCKNDMLKEA 385
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 139/309 (44%), Gaps = 35/309 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V G A+ + Y+ ++ G G V L EE++ K G+V D V Y +L+ G+ +
Sbjct: 268 MAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGK--GLVPDEVTYNTLVNGFCKE 325
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNE-HNPPKR 119
G + + +E VG+ S + V ++++ +C G A+++FD+M+ P +R
Sbjct: 326 GNLHQGLVLLSEMVGKGLSP--NVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNER 383
Query: 120 LAVNL-----------------------------GSFNVMADGYCGQGRFKDAIEVFRKM 150
L ++N + GYC GR ++A+ + R M
Sbjct: 384 TYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGM 443
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E PD +S++ +I C+ L +A ++ EM +KGV PD TY L+ ++
Sbjct: 444 VERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKL 503
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
+ FR+M+ GL P+ Y L+ G L +A D MV++ D+ +Y +
Sbjct: 504 VEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVL 563
Query: 270 MKALSDGGK 278
+ L+ +
Sbjct: 564 INGLNKKAR 572
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 40/312 (12%)
Query: 21 VRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY-FMKGMEEEAMECYNEAVGENSS 79
VR+G S V+ ++ GVVS G L KG FM+ ME+E
Sbjct: 199 VRNGVSPNVYTYNVIIR----GVVSQG----DLEKGLGFMRKMEKEG------------- 237
Query: 80 VKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR 139
+ + V N+++DA C K EA+ L M +A NL S+N + +G CG+GR
Sbjct: 238 ISPNVVTYNTLIDASCKKKKVKEAMALLRAMA-----VGGVAANLISYNSVINGLCGKGR 292
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+ E+ +M PD +++N L++ CK G L + L EM KG++P+ TY
Sbjct: 293 MSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTT 352
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKK 258
L++ + + F +M GLRPN Y L+ Q G+++EA K +++V
Sbjct: 353 LINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSG 412
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIEFSEELQEFVKGELSKEGR 314
+Y ++ G++ E + I+ G+++ G + +S + F R
Sbjct: 413 FSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFC--------R 464
Query: 315 EEEVVKLMEKKE 326
E E+ K + KE
Sbjct: 465 ERELGKAFQMKE 476
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 142/319 (44%), Gaps = 30/319 (9%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D V YS ++ GF R+ + F++ EE+ EK GV+ D V Y SL++G ++
Sbjct: 443 MVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEK--GVLPDTVTYSSLIQGLCLQ 500
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA + + E + + V S+++A C +G+ +AL+L D M P +
Sbjct: 501 QKLVEAFDLFREMM--RRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNV 558
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ------------ 168
+++V+ +G + R K A + K+ PD +++N LI+
Sbjct: 559 -----TYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGL 613
Query: 169 ---LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
C G++ EA+ ++ M + P+ Y L++ V + ++ S
Sbjct: 614 VKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSF 673
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASY-KFMMKALSDGGKLDEILE 284
+ LV L + GM DE +++ +++DA K +++ G +D +L
Sbjct: 674 ACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLN 733
Query: 285 IVG-----GILDDGGIEFS 298
++ G+L DGGI S
Sbjct: 734 VLTEMAKDGLLPDGGIHSS 752
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 156/373 (41%), Gaps = 51/373 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ L+ + G+ +F++++ + G+ + Y +L+ G+ K
Sbjct: 338 MVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVR--GLRPNERTYTTLIDGFCQK 395
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G+ EA + +E + S S V N+++ C G+ EA+ + M PP +
Sbjct: 396 GLMNEAYKVLSEMIV--SGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVV 453
Query: 121 AVN-----------LG-------------------SFNVMADGYCGQGRFKDAIEVFRKM 150
+ + LG +++ + G C Q + +A ++FR+M
Sbjct: 454 SYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREM 513
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
PD +++ +LI+ C +G L++A L+ EM +G PD TY +L++ + R
Sbjct: 514 MRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKART 573
Query: 211 DDGATYFRKMVDSGLRPNLAVYNR---------------LVGKLVQVGMLDEAKSFFDIM 255
K+ P+ YN LV G+++EA F M
Sbjct: 574 KVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTM 633
Query: 256 VKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
+++ K + A Y M+ S GG + + + + + + VK L++EG
Sbjct: 634 LQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKA-LAREGM 692
Query: 315 EEEVVKLMEKKER 327
+E+ +L++ R
Sbjct: 693 NDELSRLLQNILR 705
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 16/245 (6%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
SS S+ + V+ +L G +AL L + N H A + S+N + D +
Sbjct: 126 SSPFSSSAVFDLVVKSLSRLGFVPKALTLL-HLANRHG----FAPTVLSYNAVLDALLRR 180
Query: 138 GR-----FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
+ DA VFR M SP+ ++N +I + G L + +M +G++P
Sbjct: 181 SSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISP 240
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+ TY L+DA + +V + R M G+ NL YN ++ L G + E
Sbjct: 241 NVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELV 300
Query: 253 DIMV-KKLKMDDASYKFMMKALSDGGKLDEIL----EIVGGILDDGGIEFSEELQEFVK- 306
+ M K L D+ +Y ++ G L + L E+VG L + ++ + K
Sbjct: 301 EEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKA 360
Query: 307 GELSK 311
G LS+
Sbjct: 361 GNLSR 365
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 150/325 (46%), Gaps = 11/325 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M FV S+++ G + G D FRL L E G+V + +L+
Sbjct: 291 MLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGEL--GMVPNLFACNALIDKLCKD 348
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
EA + N ++ + V ++ +LC G D+AL +FDRM+ K +
Sbjct: 349 RRFREAERLFRGMA--NRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMRE-----KGI 401
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
V + +N + +GYC F A + +M E +P S++ LI LC+ G LA A E
Sbjct: 402 RVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAME 461
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM+ GV+ + YT+ L+ + +D+ A F KM+DS + PN +N ++
Sbjct: 462 LHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYC 521
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+VG + +A +D MV + L D+ +Y+ ++ L + E V + ++ + S
Sbjct: 522 RVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSF 581
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
L + G KEGR E + ++
Sbjct: 582 SLTTLMYG-FCKEGRLTETYHIWDE 605
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 154/391 (39%), Gaps = 82/391 (20%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG Y+ L+ G+ + + L E+ EK G+ Y L+ G KG
Sbjct: 399 KGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEK--GLAPSAASYSPLIAGLCRKGDL 456
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
AME + E + V + +++ C +G DEA +LFD+M + P +
Sbjct: 457 ASAMELHREMA--RNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEV--- 511
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQL-------------- 169
+FNVM +GYC G + A +++ +M + +PD ++ +LI L
Sbjct: 512 --TFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVD 569
Query: 170 ---------------------CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
CK G L E ++ EM +GV D ++ +++ A +++
Sbjct: 570 DLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLH 629
Query: 209 RVDDGATYFR-----------------------------------KMVDSGLRPNLAVYN 233
+ + FR KM+ G PN+ Y
Sbjct: 630 DGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYT 689
Query: 234 RLVGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDD 292
L+ L + G L A+ +++V + + +Y + L++ G+L++ +++ + +
Sbjct: 690 VLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILE 748
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLME 323
G + + +KG K G+ + + LM+
Sbjct: 749 GCLANTVTFNTLIKG-FCKAGQIQGAIDLMQ 778
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 109/251 (43%), Gaps = 33/251 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G D + ++ ++ ++ D + + LF E+KEK GV D V + ++ + +
Sbjct: 606 MRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEK--GVKPDNVFHTCMIDVHSKE 663
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A+ C+++ + + S + V +++ LC +G A L + M P
Sbjct: 664 ENIVQALNCWDKMIADGCSP--NVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSF 721
Query: 121 AVNLG-----------------------------SFNVMADGYCGQGRFKDAIEVFRKMG 151
N +FN + G+C G+ + AI++ +
Sbjct: 722 TYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNT 781
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
E PD +S++ +I++LCK G + +A +L+ EM KG+ PD Y +L+ C D
Sbjct: 782 ESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFD 841
Query: 212 DGATYFRKMVD 222
G + MV+
Sbjct: 842 KGLGIYSDMVN 852
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 140/316 (44%), Gaps = 14/316 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V + V ++ ++ G+ R G+ F+L++++ ++ G+ D Y SL+ +
Sbjct: 501 MIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDR--GLTPDNYTYRSLISVLCLT 558
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+A E ++ EN+ V +++ + +++ C G+ E ++D M+ + +
Sbjct: 559 LGAMKAKEFVDDL--ENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMR-----ARGV 611
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++L SF V+ + +FR+M E PD + +ID K + +A
Sbjct: 612 KLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALN 671
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
+ +M G +P+ TY +L++ + + +M+ PN YN + L
Sbjct: 672 CWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLA 731
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG----GIE 296
G L++AK +++ + ++ ++K G++ ++++ + G I
Sbjct: 732 NEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCIS 791
Query: 297 FSEELQEFVK-GELSK 311
+S + E K G+++K
Sbjct: 792 YSTIINELCKVGDINK 807
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 98/253 (38%), Gaps = 44/253 (17%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
F D VY+ + + + DG L ++ K GV V Y LM G E
Sbjct: 191 FPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESK--GVKGSAVPYNVLMYGLCRNNRVLE 248
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A+E N V + V +++ C + + AL++ D M + H P ++
Sbjct: 249 AVEVKNSMV--ERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVP-----SVA 301
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
S + M DG +G A + +GE P+ + N LID+LCK+ EAE L
Sbjct: 302 SCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERL---- 357
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
FR M + GL PN Y L+ L + GM+
Sbjct: 358 -------------------------------FRGMANRGLEPNEVTYAILIHSLCKRGMM 386
Query: 246 DEAKSFFDIMVKK 258
D+A FD M +K
Sbjct: 387 DDALCMFDRMREK 399
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 87/243 (35%), Gaps = 41/243 (16%)
Query: 77 NSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCG 136
+S + M + +L AL +F A LFD M P G YC
Sbjct: 153 SSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAG-----IRAYCE 207
Query: 137 QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
A + +M + +N L+ LC+N + EA E+ M ++G+ DE T
Sbjct: 208 IRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVT 267
Query: 197 Y-----------------------------------GLLMDACFEVNRVDDGATYFRKMV 221
Y ++D + +D +
Sbjct: 268 YRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLG 327
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
+ G+ PNL N L+ KL + EA+ F M + L+ ++ +Y ++ +L G +D
Sbjct: 328 ELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMD 387
Query: 281 EIL 283
+ L
Sbjct: 388 DAL 390
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 138/287 (48%), Gaps = 12/287 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + D V S L+ G +DG + LF E+ EK+G + V Y L+
Sbjct: 270 MVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREM-EKIGAA-PNHVTYCMLIDTLAKA 327
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR-MKNEHNPPKR 119
E++ E V V M + +++D LC GK DEA +F + + H P
Sbjct: 328 QRGNESLSLLGEVVSRG--VVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTP--- 382
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N ++ V+ D C G A +V +M E SP+ ++F+++I+ L K G + +A
Sbjct: 383 ---NGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKAT 439
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
+ EM ++G++P+ TYG ++D F+ + + +M+ G+ N + + LV L
Sbjct: 440 DYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGL 499
Query: 240 VQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+ G +++A++ F M ++ + +D +Y ++ L G L ++
Sbjct: 500 KKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKV 546
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 18/286 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK--LGGVVSDGVVYGSLMKGYF 58
M +G D V + +++G RDG D L E + +GG+ D V + SL+ GY
Sbjct: 128 MCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGL--DVVGWNSLVDGYC 185
Query: 59 MKGMEEEAMECYNEAVGEN---SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHN 115
G E A AV E V + V NS++ LC G+ D A + D MK +
Sbjct: 186 KVGDMETAF-----AVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGV 240
Query: 116 PPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGML 175
P N+ ++ + YC + DA ++ +M PD ++ + L+ LCK+G
Sbjct: 241 EP-----NVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRF 295
Query: 176 AEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRL 235
+EA L+ EM G P+ TY +L+D + R ++ + ++V G+ +L +Y L
Sbjct: 296 SEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTAL 355
Query: 236 VGKLVQVGMLDEAKSFF-DIMVKKLKMDDASYKFMMKALSDGGKLD 280
+ L + G +DEAK F + + +Y ++ AL G +D
Sbjct: 356 MDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVD 401
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 10/291 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
K + V +S ++ G V+ G E+KE+ G+ + V YG+++ G F +
Sbjct: 413 KSISPNVVTFSSIINGLVKRGWVGKATDYMREMKER--GIDPNVVTYGTVIDGSFKCLGQ 470
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A++ Y+E + E V V +S+++ L NGK ++A LF M NE + + ++
Sbjct: 471 EAALDVYHEMLCEGVEVNKFIV--DSLVNGLKKNGKIEKAEALFREM-NE----RGVLLD 523
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
++ + DG G A +V +++ E PD + +N I+ LC G EAE
Sbjct: 524 HVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLE 583
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
EM G+ PD+ TY ++ A + M S ++PNL Y+ L+ L + G
Sbjct: 584 EMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAG 643
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+++AK + M +++ +++A S G + D ILEI +++ G
Sbjct: 644 AVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAG 694
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 44/290 (15%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G + D V Y+ L+ G + G+ F++ +EL EK ++ D VVY + M G
Sbjct: 518 RGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEK--NLLPDAVVYNVFINCLCMLGKS 575
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA E + E + +++ +K V N+++ A GK +ALKL + MK P N
Sbjct: 576 KEA-ESFLEEM-QSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKP-----N 628
Query: 124 LGSFNVMADGY----------------------------------CGQGRFKDAI-EVFR 148
L +++ + G C QGR D I E+
Sbjct: 629 LITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHE 688
Query: 149 KMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVN 208
M D +N L+ LC NGM +A + EMS +G+ PD T+ L+ F+
Sbjct: 689 WMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSG 748
Query: 209 RVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK 258
+D+ + + +M+ G+ PN+A +N L+G L G + E+ + M K+
Sbjct: 749 HLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKR 798
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 125/274 (45%), Gaps = 10/274 (3%)
Query: 46 DGVVYGSLMKGYFMKG-MEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEAL 104
D V Y +M G+ +G + EA+ G V AV N+VL LC +G+ D A
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPEALLAEMCKRG----VPFDAVTVNTVLVGLCRDGRVDRAA 157
Query: 105 KLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNN 164
L + M +++ +N + DGYC G + A V +M D + +N+
Sbjct: 158 ALAEVMVRGGGIG---GLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNS 214
Query: 165 LIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSG 224
L+ LC+ G + A ++ M GV P+ TY + + N VDD + + +MV G
Sbjct: 215 LVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKG 274
Query: 225 LRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDASYKFMMKALSDGGKLDEIL 283
+ P++ + LVG L + G EA + F M K + +Y ++ L+ + +E L
Sbjct: 275 VLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESL 334
Query: 284 EIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
++G ++ G+ + + L KEG+ +E
Sbjct: 335 SLLGEVVSR-GVVMDLIMYTALMDWLCKEGKIDE 367
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G AD VY+ L+ +G + + EE+ + G+ D + + +L+ G+F
Sbjct: 690 MMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGR--GIAPDTITFNALILGHFKS 747
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G + A Y++ + S ++ N++L L + G+ E+ + + MK P L
Sbjct: 748 GHLDNAFSTYDQMLYHGISPNVATF--NTLLGGLESAGRIGESDMVLNEMKKRGIEPSNL 805
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+++++ GY Q +A+ ++ +M P ++N LI K GM+++A+E
Sbjct: 806 -----TYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKE 860
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ EM ++GV P TY +L+ ++ + + + M + G P+ + +
Sbjct: 861 LFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFS 920
Query: 241 QVGMLDEAKSFFDIMVK 257
+ GM EA+ + K
Sbjct: 921 KPGMSWEARRLLKNLYK 937
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 114/284 (40%), Gaps = 40/284 (14%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y+ ++ R+G + +L +K + + + Y +L+ G F G E
Sbjct: 589 GLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRS--SIKPNLITYSTLIVGLFEAGAVE 646
Query: 65 EAMECYNEAVGE---------------------------------NSSVKMSAVANNSVL 91
+A NE N+ + N+++
Sbjct: 647 KAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLV 706
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
LC NG +A+ + + M P + +FN + G+ G +A + +M
Sbjct: 707 RVLCYNGMTRKAMVVLEEMSGRGIAPDTI-----TFNALILGHFKSGHLDNAFSTYDQML 761
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
+ SP+ +FN L+ L G + E++ + EM +G+ P TY +L+ + +
Sbjct: 762 YHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKV 821
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+ + +MV G P ++ YN L+ +VGM+ +AK F+ M
Sbjct: 822 EAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEM 865
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 9/258 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M GF + + ++ + SD + + E + G+ +D VY +L++
Sbjct: 655 MSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMN--AGLCADITVYNTLVRVLCYN 712
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
GM +AM E G + + N+++ +G D A +D+M P
Sbjct: 713 GMTRKAMVVLEEMSGRG--IAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISP--- 767
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N+ +FN + G GR ++ V +M + P L+++ L+ K EA
Sbjct: 768 --NVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVR 825
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
LY EM KG P TY L+ +V + F +M + G+ P Y+ LV
Sbjct: 826 LYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWS 885
Query: 241 QVGMLDEAKSFFDIMVKK 258
++ E + F M +K
Sbjct: 886 KLRNGTEVRKFLKDMKEK 903
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 146/310 (47%), Gaps = 11/310 (3%)
Query: 16 LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVG 75
++L R G+ D +F + ++ V+DG Y +LM G +G +EA+ +E
Sbjct: 6 IVLALCRVGNVDQAVEVFRGMSDR--NCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQV 63
Query: 76 ENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC 135
E + + VA N ++ ALC G A KL D M + P + ++N + G C
Sbjct: 64 EGTFP--NPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEV-----TYNSLVHGLC 116
Query: 136 GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEY 195
+G+ A+ + +M +C P+ ++F L+D K+G + + + +KG +E+
Sbjct: 117 LKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEF 176
Query: 196 TYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
+Y L+ F+ + + G +++MV+ G +PN VY+ L+ L + G DEAK + M
Sbjct: 177 SYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEM 236
Query: 256 VKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGR 314
K ++ +Y +M + G + + + +V + D E + L K G+
Sbjct: 237 KNKGHTPNSFTYSSLMWGYFEAGDIHKAI-LVWKEMTDNDCNHHEVCYSILINGLCKNGK 295
Query: 315 EEEVVKLMEK 324
+E + + ++
Sbjct: 296 LKEALIVWKQ 305
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 144/291 (49%), Gaps = 10/291 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V+G +PV ++ L+ + GD +L + + L G V + V Y SL+ G +K
Sbjct: 61 MQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNM--FLKGCVPNEVTYNSLVHGLCLK 118
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G ++AM N V N V + + +++D +G+ + +++ ++ K
Sbjct: 119 GKLDKAMSLLNRMVA-NKCVP-NDITFGTLVDGFVKHGRALDGVRVLVSLEE-----KGY 171
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
N S++ + G +G+ + ++++++M E C P+T+ ++ LID LC+ G EA+E
Sbjct: 172 RGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKE 231
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
EM +KG P+ +TY LM FE + +++M D+ + Y+ L+ L
Sbjct: 232 YLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLC 291
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGIL 290
+ G L EA + M+ + +K+D +Y M+ + +++ +++ +L
Sbjct: 292 KNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQML 342
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 14/279 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDS-DGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
M V + + + L+ GFV+ G + DGV R+ L+EK G + Y SL+ G F
Sbjct: 131 MVANKCVPNDITFGTLVDGFVKHGRALDGV-RVLVSLEEK--GYRGNEFSYSSLISGLFK 187
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+G E M+ + E V K + + ++++D LC GK DEA + MKN+ + P
Sbjct: 188 EGKGEHGMQLWKEMV--EKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTP-- 243
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAE 179
N +++ + GY G AI V+++M + C+ + ++ LI+ LCKNG L EA
Sbjct: 244 ---NSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEAL 300
Query: 180 ELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV--DSGLRPNLAVYNRLVG 237
++ +M +G+ D Y ++ V+ G F +M+ + L+P++ YN L+
Sbjct: 301 IVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLN 360
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSD 275
+ A + M+ + D + +K L D
Sbjct: 361 AFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRD 399
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 151/315 (47%), Gaps = 18/315 (5%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
+S L+ ++ ++ + E++++ G + D V Y +++ + + ++A++ N
Sbjct: 358 TFSTLINSLCQNRLAEYAIEVLEQMQKY--GYMPDVVSYNTIISCFSEQACADDALKLLN 415
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+ K ++ N+VL LC ++ +A +L +M E N +FN++
Sbjct: 416 SML-----CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKED-----CHTNEMTFNILI 465
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
D C G+ KDAIE+F M +YRC+PD +++++LI+ + G+ A +L+ M +
Sbjct: 466 DSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRA-- 523
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
D ++Y + R DD MV PN +N L+ L Q G+++ A
Sbjct: 524 -DIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEV 582
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGI-LDDGGIEFSEELQEFVKGEL 309
++ M K + D +Y ++ S+ G LD+ L+ + + + I ++ L+ + E
Sbjct: 583 YEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPCEPDTISYNSILKGLCRAER 642
Query: 310 SKEGREEEVVKLMEK 324
K+ E+ V +++ K
Sbjct: 643 WKDA-EKLVTEMLRK 656
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 121/275 (44%), Gaps = 30/275 (10%)
Query: 31 RLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSV 90
R+ E LK G +D V + +L+ GY G +A A ++ + V ++
Sbjct: 140 RVLEALKTS-GA--ADAVSHNTLVAGYCRDGSLWDAERVLEAARASGAA---NVVTYTAL 193
Query: 91 LDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
+D C +G+ +AL+L M +A + ++N + G C ++++A E+ R+M
Sbjct: 194 IDGYCRSGRLTDALRLIASMP--------VAPDTYTYNTVLKGLCFAKQWEEAEELMREM 245
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
C P+ ++F I C+NG+L A EL +M G PD Y L++ E RV
Sbjct: 246 IRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRV 305
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFM 269
DD M+ RPN YN + L G DE MV+K +DA++ +
Sbjct: 306 DDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTL 362
Query: 270 MKALSDGGKLDEILEIVGGILDDGGIEFSEELQEF 304
+ +L L + IE E++Q++
Sbjct: 363 INSLCQNR------------LAEYAIEVLEQMQKY 385
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 134/313 (42%), Gaps = 52/313 (16%)
Query: 8 ADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
A+ V Y+ L+ G+ R G RL + V D Y +++KG EEA
Sbjct: 185 ANVVTYTALIDGYCRSGRLTDALRLIASMP-----VAPDTYTYNTVLKGLCFAKQWEEAE 239
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK---------------- 111
E E + N A + A C NG D A++L ++M
Sbjct: 240 ELMREMIRNNCHPNEVTFATQ--IRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVN 297
Query: 112 --NEH----NPPKRLAV-----NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTL 160
+EH + K L+ N +N G C GR+ + E+ +M C P+
Sbjct: 298 GFSEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDA 357
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+F+ LI+ LC+N + A E+ +M G PD +Y ++ +CF D A K+
Sbjct: 358 TFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTII-SCFSEQACADDAL---KL 413
Query: 221 VDSGL-RPNLAVYNRLVGKLVQVGMLDEAKSFFD---IMVKKLKMD----DASYKFMMKA 272
++S L +P+ +N ++ L + A+ ++D +M K LK D + ++ ++ +
Sbjct: 414 LNSMLCKPDTISFNAVLKCLCR------AERWYDAAELMAKMLKEDCHTNEMTFNILIDS 467
Query: 273 LSDGGKLDEILEI 285
L G++ + +E+
Sbjct: 468 LCQNGQVKDAIEM 480
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 15/191 (7%)
Query: 7 VADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
D V YS L+ GF G F LF + + +D Y + +KG M ++A
Sbjct: 490 TPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCR-----ADIFSYNATLKGLCMAARWDDA 544
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
E + V ++ + V N ++++LC G + A++++++M P + ++ +
Sbjct: 545 GELIADMVTKDCLP--NEVTFNILINSLCQKGLVNRAIEVYEQM-----PKYGITPDIFT 597
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
+N + +GY QG DA++ M C PDT+S+N+++ LC+ +AE+L EM
Sbjct: 598 YNALINGYSEQGCLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEML 654
Query: 187 DKGVNPDEYTY 197
K P+E T+
Sbjct: 655 RKNCTPNEVTF 665
>gi|255584082|ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527472|gb|EEF29603.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 487
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 142/310 (45%), Gaps = 11/310 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G + D V Y+ L+ + R + + L ++E + D V Y SL+ G +
Sbjct: 67 GVLPDVVTYNTLIDAYSRFVSFNAAYSLLNRMRE--ASISPDVVTYNSLIAGAARNCLLL 124
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
E++ ++E + N + + N+++ GK +EA ++ ++ P
Sbjct: 125 ESLNLFDEML--NMGIVPDVWSYNTLMHCFFKLGKAEEANEVLRQIFGHGLSPCP----- 177
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN+M +G C G +A+ +FR + ++ P +++N LI+ LCK+ L A + E
Sbjct: 178 TTFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQLITYNILINGLCKDRRLRAARSMLKE 237
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
+ G P+ TY +M CF R G ++M+D G + Y +VG L++ G
Sbjct: 238 LETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDKGYTFDGFAYCTVVGVLIKTGR 297
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQE 303
L+EA + M+K ++ D ASY ++ G L+ +++ I + G++ E
Sbjct: 298 LEEATEYMRQMIKNGIEHDLASYNTLINLYCKQGNLEAAYQLLDEI-EKEGLQCDEYTHT 356
Query: 304 FVKGELSKEG 313
+ + K G
Sbjct: 357 ILINWMCKAG 366
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 133/332 (40%), Gaps = 29/332 (8%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
+F G P ++ ++ G ++G + LF LK+ G V + Y L+ G
Sbjct: 168 IFGHGLSPCPTTFNIMINGLCKNGFTSNALMLFRSLKQH--GFVPQLITYNILINGLCKD 225
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
A E E S +A+ +V+ + +F + L++ M ++
Sbjct: 226 RRLRAARSMLKEL--ETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDK------- 276
Query: 121 AVNLGSFNVMADGYCG-------QGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNG 173
+ YC GR ++A E R+M + D S+N LI+ CK G
Sbjct: 277 -----GYTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDLASYNTLINLYCKQG 331
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYN 233
L A +L E+ +G+ DEYT+ +L++ + + + + M G L N
Sbjct: 332 NLEAAYQLLDEIEKEGLQCDEYTHTILINWMCKAGNILGARRHMQHMNMMGFDSCLVALN 391
Query: 234 RLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVGGILDD 292
+V L + G +D A F+ M KM D+ +Y ++ L G+ +++ L
Sbjct: 392 CMVDGLCKNGQIDHAVKLFESM----KMRDSFTYSSLVHNLCKNGRFHRASKLLLSCLRS 447
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
G++ Q V L G ++E KL K
Sbjct: 448 -GMKILPSAQRVVISGLRYSGFQKEARKLKSK 478
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 158 DTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYF 217
T N I LCK L +AE + + GV PD TY L+DA + +
Sbjct: 36 STRLLNISIASLCKAKELNKAESVIIDGIRLGVLPDVVTYNTLIDAYSRFVSFNAAYSLL 95
Query: 218 RKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDG 276
+M ++ + P++ YN L+ + +L E+ + FD M+ + D SY +M
Sbjct: 96 NRMREASISPDVVTYNSLIAGAARNCLLLESLNLFDEMLNMGIVPDVWSYNTLMHCFFKL 155
Query: 277 GKLDEILEIVGGILDDG 293
GK +E E++ I G
Sbjct: 156 GKAEEANEVLRQIFGHG 172
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 128/284 (45%), Gaps = 14/284 (4%)
Query: 15 YLMLGFVRDGDSDGVFR--LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
+LML F+ + R LF K G V + SL++ Y G+ +E++ +
Sbjct: 107 FLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFNSLIRSYGNAGLFQESVNLFQT 166
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ + S + NS+L L G+ A +FD M+ + + + +FN +
Sbjct: 167 M--KKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYG----VTPDSYTFNTLIS 220
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK--GV 190
G+C A +F++M Y C+PD +++N +ID LC+ G + A L M K V
Sbjct: 221 GFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAV 280
Query: 191 NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKS 250
+P+ +Y L+ +D+ F +M+ GL+PN YN L+ L + DE K
Sbjct: 281 HPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKG 340
Query: 251 FF---DIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILD 291
F D D ++ ++KA D G LD +++ +L+
Sbjct: 341 FLIGGDAFT-TFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLN 383
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 17/314 (5%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D ++ L+ GF ++ D F +F+E+ +L D V Y +++ G G +
Sbjct: 207 GVTPDSYTFNTLISGFCKNSMVDQAFTIFKEM--ELYSCNPDVVTYNTIIDGLCRAGKVK 264
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
A N + + ++V + V+ ++L C + DEAL +F M P N
Sbjct: 265 IAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKP-----NA 319
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGE--YRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
++N + G R+ D I+ F G+ SPD +FN LI C G L A +++
Sbjct: 320 VTYNTLIKGLSEAHRY-DEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVF 378
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL-------RPNLAVYNRL 235
EM + ++PD +Y +L+ N D T F ++ + + +P A YN +
Sbjct: 379 QEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLM 438
Query: 236 VGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
L G +A+ F ++K+ D +SY+ ++ L GK E++ +L +
Sbjct: 439 FEYLCANGKAKQAEKVFRQLMKRGAQDPSSYRTLITGLCREGKFKAAYELLVLMLRREFV 498
Query: 296 EFSEELQEFVKGEL 309
E + + G L
Sbjct: 499 PDPETYEVLIDGLL 512
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 146/336 (43%), Gaps = 28/336 (8%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
D V Y+ ++ G R G L + +K V + V Y +L++GY MK +EA+
Sbjct: 246 DVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALL 305
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF----DRMKNEHNPPKRLAVNL 124
++E + +K +AV N+++ L ++DE +K F D + +
Sbjct: 306 VFHEMLTR--GLKPNAVTYNTLIKGLSEAHRYDE-IKGFLIGGDAFTT-------FSPDA 355
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+FN++ +C G A++VF++M + PD+ S++ LI LC +AE L+ E
Sbjct: 356 CTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNE 415
Query: 185 MSDKGV-------NPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVG 237
+ +K V P Y L+ + + FR+++ G + + + Y L+
Sbjct: 416 LFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQ-DPSSYRTLIT 474
Query: 238 KLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKL----DEILEIVGGILDD 292
L + G A +M+++ D +Y+ ++ L G+ D + ++
Sbjct: 475 GLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLP 534
Query: 293 GGIEFSEELQEFVKGELSKEGREEEVVKLMEKKERE 328
F L E VK + + + V ++EK+ R+
Sbjct: 535 VATTFHSVLAELVKRKFANDSFGLLTV-MLEKRIRQ 569
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 149/324 (45%), Gaps = 38/324 (11%)
Query: 8 ADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGY-------- 57
P V++Y L+ GF G+ D LF++++ K G + + V Y +L+ GY
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETK--GCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 58 ---FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEH 114
++ M + +E + ++ N V++ LC G+ E + M
Sbjct: 259 GFKLLRSMALKGLE-------------PNLISYNVVINGLCREGRMKEVSFVLTEMNR-- 303
Query: 115 NPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGM 174
+ +++ ++N + GYC +G F A+ + +M + +P +++ +LI +CK G
Sbjct: 304 ---RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 175 LAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNR 234
+ A E +M +G+ P+E TY L+D + +++ R+M D+G P++ YN
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 235 LVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
L+ G +++A + + M +K L D SY ++ +DE L + +++ G
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 294 ----GIEFSEELQEFVKGELSKEG 313
I +S +Q F + +KE
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEA 504
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 142/312 (45%), Gaps = 35/312 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +KG + + Y+ ++ G R+G V + E+ + G D V Y +L+KGY +
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR--GYSLDEVTYNTLIKGYCKE 323
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMK------NEH 114
G +A+ + E + + S + S++ ++C G + A++ D+M+ NE
Sbjct: 324 GNFHQALVMHAEML--RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 115 ---------------NPPKRL---------AVNLGSFNVMADGYCGQGRFKDAIEVFRKM 150
N R+ + ++ ++N + +G+C G+ +DAI V M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 151 GEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRV 210
E SPD +S++ ++ C++ + EA + EM +KG+ PD TY L+ E R
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 211 DDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFM 269
+ + +M+ GL P+ Y L+ G L++A + MV+K + D +Y +
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 270 MKALSDGGKLDE 281
+ L+ + E
Sbjct: 562 INGLNKQSRTRE 573
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 6/251 (2%)
Query: 78 SSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ 137
S V + N ++ C G D AL LFD+M+ + P N+ ++N + DGYC
Sbjct: 199 SQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP-----NVVTYNTLIDGYCKL 253
Query: 138 GRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTY 197
+ D ++ R M P+ +S+N +I+ LC+ G + E + EM+ +G + DE TY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 198 GLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM-V 256
L+ + +M+ GL P++ Y L+ + + G ++ A F D M V
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 257 KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREE 316
+ L ++ +Y ++ S G ++E ++ + D+G + G E+
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 317 EVVKLMEKKER 327
+ L + KE+
Sbjct: 434 AIAVLEDMKEK 444
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G + Y+ L+ + G+ + ++++ + G+ + Y +L+ G+ K
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR--GLCPNERTYTTLVDGFSQK 393
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA E ++ S V N++++ C GK ++A+ + + MK K L
Sbjct: 394 GYMNEAYRVLREM--NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE-----KGL 446
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
+ ++ S++ + G+C +A+ V R+M E PDT+++++LI C+ EA +
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 181 LYGEMSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKL 239
LY EM G+ PDE+TY L++A C E ++ +MV+ G+ P++ Y+ L+ L
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCME-GDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 240 VQVGMLDEAKSFF 252
+ EAK
Sbjct: 566 NKQSRTREAKRLL 578
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 140/306 (45%), Gaps = 25/306 (8%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D V YS ++ GF R D D R+ E+ EK G+ D + Y SL++G+ +
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK--GIKPDTITYSSLIQGFCEQRRT 501
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
+EA + Y E + + ++++A C G ++AL+L + M + P +
Sbjct: 502 KEACDLYEEML--RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP-----D 554
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQ--------------- 168
+ +++V+ +G Q R ++A + K+ P ++++ LI+
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614
Query: 169 LCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN 228
C GM+ EA++++ M K PD Y +++ + T +++MV SG +
Sbjct: 615 FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLH 674
Query: 229 LAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-SYKFMMKALSDGGKLDEILEIVG 287
LV L + G ++E S +++ ++ +A K +++ G +D +L+++
Sbjct: 675 TVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLA 734
Query: 288 GILDDG 293
+ DG
Sbjct: 735 EMAKDG 740
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 2/170 (1%)
Query: 126 SFNVMADGYCGQGR-FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
S+N + D R A VF++M E + SP+ ++N LI C G + A L+ +
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M KG P+ TY L+D ++ ++DDG R M GL PNL YN ++ L + G
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 245 LDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ E M ++ +D+ +Y ++K G + L + +L G
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 150/325 (46%), Gaps = 11/325 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V Y++++LG + G D + + E G+ + + Y LM+G F K
Sbjct: 457 MIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIE--SGLKPNAITYTILMEGSFKK 514
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G E A +++ V + + + NS+++ LC G+ EA + + P +
Sbjct: 515 GDCEHAFNMFDQMVA--AGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSM 572
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++N + DGY +G A V+R+M SP+ +++ +LI+ CK+ + A +
Sbjct: 573 -----TYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALK 627
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
++ +M KG+ D Y L+ ++ +++ +F K+++ GL PN VYN ++
Sbjct: 628 MHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYR 687
Query: 241 QVGMLDEAKSFFDIMV-KKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSE 299
+ ++ A + M+ K+ D Y ++ L GKL L++ +L G +
Sbjct: 688 NLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIF 747
Query: 300 ELQEFVKGELSKEGREEEVVKLMEK 324
+ G L G+ E K++++
Sbjct: 748 MYNVLING-LCNHGQLENAGKILKE 771
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 137/335 (40%), Gaps = 76/335 (22%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEEL---------------------------- 36
G + + Y+ LM G + GD + F +F+++
Sbjct: 496 GLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEA 555
Query: 37 KEKLGGVVSDGVV-----YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
++KL + + Y ++ GY +G + A Y E S + + + S++
Sbjct: 556 RDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMC--RSEISPNVITYTSLI 613
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
+ C + K D ALK+ D MK K L +++ + + G+C ++A + F K+
Sbjct: 614 NGFCKSNKMDLALKMHDDMKR-----KGLELDITVYATLIAGFCKMQDMENACKFFSKLL 668
Query: 152 EYRCSPDTLSFN-----------------------------------NLIDQLCKNGMLA 176
E +P+T+ +N +LID L K G L+
Sbjct: 669 EVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLS 728
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
A +LY EM +G+ PD + Y +L++ ++++ ++M + + P + +YN L+
Sbjct: 729 FALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLI 788
Query: 237 GKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMM 270
+ G L EA D M+ K L DD +Y ++
Sbjct: 789 AGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILV 823
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 9/199 (4%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
KG D VY+ L+ GF + D + + F +L E G+ + +VY ++ Y
Sbjct: 635 KGLELDITVYATLIAGFCKMQDMENACKFFSKLLEV--GLTPNTIVYNIMISAYRNLNNM 692
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E A+ + E + N+ + S++D L GK AL L+ M P +
Sbjct: 693 EAALNLHKEMI--NNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVP-----D 745
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ +NV+ +G C G+ ++A ++ ++M +P L +N LI K G L EA L+
Sbjct: 746 IFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHD 805
Query: 184 EMSDKGVNPDEYTYGLLMD 202
EM DKG+ PD+ TY +L++
Sbjct: 806 EMLDKGLVPDDTTYDILVN 824
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 149/337 (44%), Gaps = 51/337 (15%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G+V Y+ ++ VR G+ RL +E+ + V + V SL+KGY ++G
Sbjct: 287 GWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVD--SRVPVNVAVATSLIKGYCVRGDVN 344
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNN-GKFDEALKLFDRMKNEHNPPKRLAVN 123
A+ ++E V + VA SVL C+ G ++A +L+ RMK P +N
Sbjct: 345 SALRLFDEVVEVGVT---PNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILN 401
Query: 124 -----------------------------LGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
+ ++N++ C G+ +A ++ KM
Sbjct: 402 FLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKG 461
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
+P +S+N++I CK G + +A E+ + + G+ P+ TY +LM+ F+ +
Sbjct: 462 ITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAF 521
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALS 274
F +MV +G+ P +N ++ L +VG + EA+ + +K+ F+ +++
Sbjct: 522 NMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQ--------SFIPTSMT 573
Query: 275 DGGKLDEILEIVGGILDDGGIEFSEEL-QEFVKGELS 310
I+ G + +G I+ +E + +E + E+S
Sbjct: 574 YNC-------IIDGYVKEGAIDSAESVYREMCRSEIS 603
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 119/281 (42%), Gaps = 9/281 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M G V + L+ +R + RLF+E+ E+ + D LM+
Sbjct: 178 MLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAER--RIYGDCYTLQVLMRACLKG 235
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA + +A G +K+ A + + V+ A+C D A KL + + P
Sbjct: 236 GKFVEAERYFGQAAGR--GLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSE- 292
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
G++ + G F +A+ + +M + R + +LI C G + A
Sbjct: 293 ----GTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALR 348
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L+ E+ + GV P+ + +L++ C ++ V+ + +M GL+P + + N L+
Sbjct: 349 LFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFR 408
Query: 241 QVGMLDEAKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDE 281
+ +L+ A D V+ +Y ++ L + GK++E
Sbjct: 409 KQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNE 449
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 7/222 (3%)
Query: 32 LFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVL 91
L E E+ G +SD V+ L+ Y EA+EC+ A+ E+ V N +L
Sbjct: 137 LLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECF-RAMLEDGVVPWVPFV-NVLL 194
Query: 92 DALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMG 151
A+ ++A +LFD M +R+ + + V+ G+F +A F +
Sbjct: 195 TAMIRRNMVEDAHRLFDEMAE-----RRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAA 249
Query: 152 EYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVD 211
D S++ +I +C+ L A +L + G P E TY ++ AC +
Sbjct: 250 GRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFG 309
Query: 212 DGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD 253
+ +MVDS + N+AV L+ G ++ A FD
Sbjct: 310 EALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFD 351
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 6/207 (2%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N +L + K EA++ F M + P VN V+ + +DA +F
Sbjct: 156 NYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVN-----VLLTAMIRRNMVEDAHRLF 210
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
+M E R D + L+ K G EAE +G+ + +G+ D +Y +++ A
Sbjct: 211 DEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRG 270
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASY 266
+ +D + + G P+ Y ++G V++G EA D MV ++ ++ A
Sbjct: 271 SDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVA 330
Query: 267 KFMMKALSDGGKLDEILEIVGGILDDG 293
++K G ++ L + +++ G
Sbjct: 331 TSLIKGYCVRGDVNSALRLFDEVVEVG 357
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 10/270 (3%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y L+ GF + G + L +++ + GV + +++ +++ GY +GM + A++
Sbjct: 274 TYGVLINGFCKIGQMEAAEMLLADMQGR--GVGHNQIIFNTMIDGYCRQGMVDNALKV-- 329
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMA 131
+A E +++ N++ LC + EA L M + PP N ++ +
Sbjct: 330 KAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPP-----NYVTYTTLI 384
Query: 132 DGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVN 191
+C +G +A +FR+M P +++N ++D K G + EAE EM KG+
Sbjct: 385 SIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLV 444
Query: 192 PDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSF 251
PD YTY L+ +VD F +M G PN+ Y L+ L + G +EA
Sbjct: 445 PDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQL 504
Query: 252 FDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
+D M+K L DD+ Y ++ +L + D
Sbjct: 505 YDDMLKAGLTPDDSLYSALVGSLHTDNRKD 534
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 43/307 (14%)
Query: 10 PVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK--------- 60
P+ S ++ GF + G D L +E+ GV + + Y SL+ Y +
Sbjct: 132 PLAASVVVDGFCKSGRVDDARALLDEMPRH--GVRLNALCYNSLLDCYVRRKDDARVQEL 189
Query: 61 ------GMEEEAMECYNEAVGENSSV----KMSAVAN--------------NSVLDALCN 96
G E + Y V S+ K+ AV + +V++A C
Sbjct: 190 LEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCR 249
Query: 97 NGKFDEALKLFDR-MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRC 155
G A ++FD + N P +R ++ V+ +G+C G+ + A + M
Sbjct: 250 AGNVRRASEVFDECVGNGIEPNER------TYGVLINGFCKIGQMEAAEMLLADMQGRGV 303
Query: 156 SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT 215
+ + FN +ID C+ GM+ A ++ M G+ D YTY L VNR+ + T
Sbjct: 304 GHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKT 363
Query: 216 YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALS 274
M++ G+ PN Y L+ + G + EA+ F M K M +Y MM
Sbjct: 364 LLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYI 423
Query: 275 DGGKLDE 281
G + E
Sbjct: 424 KKGSIRE 430
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 9/169 (5%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG + V Y+ L+ ++GD RLF E+ K G + V Y +M GY K
Sbjct: 368 MIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGK--GAMPSVVTYNVMMDGYIKK 425
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G EA E E + S++ C NGK D ALKLF+ MK+ P
Sbjct: 426 GSIREAERFRKEM--EKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEP--- 480
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQL 169
N+ ++ + G +GR ++A +++ M + +PD ++ L+ L
Sbjct: 481 --NVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 13/246 (5%)
Query: 82 MSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQ---G 138
+S +A + V+D C +G+ D+A L D M P + +N +N + D Y +
Sbjct: 130 VSPLAASVVVDGFCKSGRVDDARALLDEM-----PRHGVRLNALCYNSLLDCYVRRKDDA 184
Query: 139 RFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYG 198
R ++ +E+ G ++ L+D L G +++ E + EM K V D Y Y
Sbjct: 185 RVQELLEIMENGG---IEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYT 241
Query: 199 LLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVK 257
+++A V + F + V +G+ PN Y L+ ++G ++ A+ D+ +
Sbjct: 242 AVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGR 301
Query: 258 KLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEE 317
+ + + M+ G +D L+ V ++ GIE + L + R E
Sbjct: 302 GVGHNQIIFNTMIDGYCRQGMVDNALK-VKAAMEKMGIELDVYTYNTLACGLCRVNRMAE 360
Query: 318 VVKLME 323
L+
Sbjct: 361 AKTLLH 366
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 7/183 (3%)
Query: 138 GRFKDAIEVF-RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYT 196
G+ DA + R +G S L+ + ++D CK+G + +A L EM GV +
Sbjct: 110 GQLADAAAILTRALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALC 169
Query: 197 YGLLMDACFEVNRVDDGAT--YFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDI 254
Y L+D C+ V R DD M + G+ + Y LV L G + + ++ D
Sbjct: 170 YNSLLD-CY-VRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDE 227
Query: 255 M-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEG 313
M K + D Y ++ A G + E+ + + GIE +E + K G
Sbjct: 228 MKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGN-GIEPNERTYGVLINGFCKIG 286
Query: 314 REE 316
+ E
Sbjct: 287 QME 289
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 132/280 (47%), Gaps = 18/280 (6%)
Query: 24 GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMS 83
G D R+F E+ + G D YG+L+ G G EA E + E E + +
Sbjct: 170 GTMDAALRIFREMPNR--GCPPDSYTYGTLINGLCRLGKIGEAKELFKEM--ETKACSPT 225
Query: 84 AVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDA 143
V S++ LC + D A++L + M ++ P N+ +++ + DG+C G A
Sbjct: 226 VVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKP-----NVFTYSSLMDGHCKSGCSSRA 280
Query: 144 IEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDA 203
+E+ M R P+ ++++ L+ LCK G L EA E+ M +G+ PD YG ++
Sbjct: 281 LELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISG 340
Query: 204 CFEVNRVDDGATYFRKMVDSGLRPN---LAVYNRLVGKLVQVGMLDEAKS-----FFDIM 255
++ + + A + +MV G+ PN +++ R+ +VQ G+ E + + +
Sbjct: 341 FCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQ-GLCTEHPNRAFQLYLSMR 399
Query: 256 VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGI 295
+ + +D ++ ++ + G L + +V ++ DG I
Sbjct: 400 TRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCI 439
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 24/305 (7%)
Query: 2 FVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEEL----KEKLGGVVSDGVVYGSLMKGY 57
+ GF +S ++ V S FRL EEL KE+ + D ++ S+ + Y
Sbjct: 42 YTNGFRHSHQTFSLMISRLV----SANHFRLAEELLCRMKEEKCNITED--IFLSICRAY 95
Query: 58 FMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
+A+ + + + + S + +V L + AL+ + M+ PP
Sbjct: 96 GRVHKPLDAVRVFRKM--KEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPP 153
Query: 118 KRLAVNLGSFNVMADGYC-GQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
++ S NV+ C G A+ +FR+M C PD+ ++ LI+ LC+ G +
Sbjct: 154 -----SVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIG 208
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EA+EL+ EM K +P TY L+ + +D +M G++PN+ Y+ L+
Sbjct: 209 EAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLM 268
Query: 237 GKLVQVGMLDEAKSFFDIMVKKLKMDD-ASYKFMMKALSDGGKLDEILEI-----VGGIL 290
+ G A D+MV + + + +Y ++ L GKL E +EI + G+
Sbjct: 269 DGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLR 328
Query: 291 DDGGI 295
D G+
Sbjct: 329 PDAGL 333
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 31/280 (11%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ G + D D RL EE+ K G+ + Y SLM G+ G A+E
Sbjct: 227 VTYTSLIHGLCQSKDLDSAIRLLEEMASK--GIKPNVFTYSSLMDGHCKSGCSSRALELL 284
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVM 130
+ V M + ++++ LC GK EA+++ DRMK + P + G + +
Sbjct: 285 DMMVSRRHLPNM--ITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRP-----DAGLYGKI 337
Query: 131 ADGYCGQGRFKDAIEVFRKMGEYRCSPD--TLSFNNLIDQLCKNGMLAE----AEELYGE 184
G+C +F +A +M SP+ T S + I + G+ E A +LY
Sbjct: 338 ISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLS 397
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV-------- 236
M +G++ D T+ L++ + A +MV G P+ +N +V
Sbjct: 398 MRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRK 457
Query: 237 ----GKLVQVGMLDEAKSF----FDIMVKKLKMDDASYKF 268
+LVQV ++ E + + ++ K++ D+S F
Sbjct: 458 VRESAELVQVELMVEHRKMGPDNTNDLIWKVQETDSSLYF 497
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 4/169 (2%)
Query: 161 SFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKM 220
+F+ +I +L AEEL M ++ N E + + A V++ D FRKM
Sbjct: 52 TFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKM 111
Query: 221 VDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALS-DGGK 278
+ P+ Y + LV L A F+ M + + AS ++KAL + G
Sbjct: 112 KEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGT 171
Query: 279 LDEILEIVGGILDDGGIEFSEELQEFVKG--ELSKEGREEEVVKLMEKK 325
+D L I + + G S + G L K G +E+ K ME K
Sbjct: 172 MDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETK 220
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 104 bits (260), Expect = 8e-20, Method: Composition-based stats.
Identities = 77/296 (26%), Positives = 144/296 (48%), Gaps = 20/296 (6%)
Query: 2 FVKGFVADPVVYSY--LMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFM 59
F K P + SY LM G + ++ LFE++K G + Y L+ +
Sbjct: 786 FTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKS--AGTHPNNFTYNLLLDAHGK 843
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLF-DRMKNEHNPPK 118
+ + Y+E + + +A+ +N ++ AL + ++AL L+ + M + +P
Sbjct: 844 SKRINKLYDLYSEM--RSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTP 901
Query: 119 RLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA 178
++ + DG GR + A+++F +M +Y C P+++ +N LI+ K+G + A
Sbjct: 902 ------CTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFA 955
Query: 179 EELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGK 238
EL+ +M +G+ PD +Y +L++ R+D+ YF ++ +GL P+ YN ++
Sbjct: 956 CELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIING 1015
Query: 239 LVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD------EILEIVG 287
L + LDEA S F M + + D +Y ++ L GK+D E L++VG
Sbjct: 1016 LGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVG 1071
Score = 100 bits (249), Expect = 1e-18, Method: Composition-based stats.
Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 17/260 (6%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G + + ++ ++ V+ + + L+ EL G YG L+ G
Sbjct: 857 MRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMS--GDFSPTPCTYGPLIDGLLKA 914
Query: 61 GMEEEAMECYNEAV----GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNP 116
G E+AM+ + E + G NS V N +++ +G+ D A +LF +M E
Sbjct: 915 GRSEQAMKIFEEMLDYGCGPNS------VIYNILINGFGKSGEIDFACELFKKMVKEGIR 968
Query: 117 PKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLA 176
P +L S+ ++ + C GR +A++ F ++ PDT+S+N +I+ L K+ L
Sbjct: 969 P-----DLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLD 1023
Query: 177 EAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLV 236
EA L+ EM ++G++PD YTY L+ +VD + ++ GL P++ YN L+
Sbjct: 1024 EALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALI 1083
Query: 237 GKLVQVGMLDEAKSFFDIMV 256
G D+A S F M+
Sbjct: 1084 RGHSLSGNKDQAFSVFKKMM 1103
Score = 93.2 bits (230), Expect = 2e-16, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 8/245 (3%)
Query: 50 YGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDR 109
Y LM G E+A+E + + +++ + N +LDA + + ++ L+
Sbjct: 799 YNCLMDGLLGSNFTEKALELFEDM--KSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSE 856
Query: 110 MKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQL 169
M++ P N + N++ A++++ ++ SP ++ LID L
Sbjct: 857 MRSRGCEP-----NAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGL 911
Query: 170 CKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNL 229
K G +A +++ EM D G P+ Y +L++ + +D F+KMV G+RP+L
Sbjct: 912 LKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDL 971
Query: 230 AVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGG 288
Y LV L G +DEA +F+ + + L D SY F++ L +LDE L +
Sbjct: 972 KSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSE 1031
Query: 289 ILDDG 293
+ + G
Sbjct: 1032 MKNRG 1036
Score = 91.3 bits (225), Expect = 7e-16, Method: Composition-based stats.
Identities = 66/246 (26%), Positives = 116/246 (47%), Gaps = 9/246 (3%)
Query: 42 GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFD 101
G + + Y L+ + G EA++ Y + E +K S ++++ AL G
Sbjct: 196 GFILNAYSYNGLIH-LLLPGFCNEALKVYKRMISE--GMKPSMKTYSALMVALGRRGDTR 252
Query: 102 EALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLS 161
+ + L + MK+ P N+ ++ + R DA +F++M + C PD ++
Sbjct: 253 KIMNLLEEMKSIGLRP-----NIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVIT 307
Query: 162 FNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMV 221
+ LID LC G L +A+ELY +M +PD TY LMD +V ++ ++ +M
Sbjct: 308 YTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEME 367
Query: 222 DSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLD 280
G P++ Y L+ L + G +D A D+M K + + +Y M+ L +LD
Sbjct: 368 VDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLD 427
Query: 281 EILEIV 286
E LE++
Sbjct: 428 EALELL 433
Score = 89.7 bits (221), Expect = 3e-15, Method: Composition-based stats.
Identities = 62/240 (25%), Positives = 113/240 (47%), Gaps = 9/240 (3%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEE 65
F P Y L+ G ++ G S+ ++FEE+ + G + V+Y L+ G+ G +
Sbjct: 897 FSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDY--GCGPNSVIYNILINGFGKSGEIDF 954
Query: 66 AMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLG 125
A E + + V E ++ + +++ LC G+ DEA++ F+ +K P +
Sbjct: 955 ACELFKKMVKE--GIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTV----- 1007
Query: 126 SFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEM 185
S+N + +G R +A+ +F +M SPD ++N LI L G + A ++Y E+
Sbjct: 1008 SYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEEL 1067
Query: 186 SDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGML 245
G+ P +TY L+ D + F+KM+ G PN + +L K + G++
Sbjct: 1068 QLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLV 1127
Score = 87.4 bits (215), Expect = 1e-14, Method: Composition-based stats.
Identities = 71/286 (24%), Positives = 129/286 (45%), Gaps = 10/286 (3%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M V G+ D V Y+ L+ + GD D F + + + K G+ + Y +++ G
Sbjct: 366 MEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTK--GIFPNLHTYNTMICGLLKA 423
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
+EA+E E+ VK +A + +D +G +A+ F+ MK P
Sbjct: 424 RRLDEALELLENM--ESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIA 481
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
A N S +A+ GR +A ++F + + SPD++++N L+ K G + +A +
Sbjct: 482 ACN-ASLYTLAE----TGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQ 536
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLV 240
L EM KG PD L++ ++ RVD F ++ + L P + YN L+ L
Sbjct: 537 LLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLG 596
Query: 241 QVGMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEI 285
+ G + +A F M + + ++ ++ LS +D L++
Sbjct: 597 KEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKM 642
Score = 87.0 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 70/329 (21%), Positives = 138/329 (41%), Gaps = 45/329 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M +G YS LM+ R GD+ + L EE+K G+ + Y ++
Sbjct: 226 MISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSI--GLRPNIYTYTICIRALGRA 283
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
++A + E ++ + ++DALC GK D+A +L+ +M+ + P R+
Sbjct: 284 RRIDDAWGIFKEM--DDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRV 341
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEE 180
++ + D + G + + +M +PD +++ LI+ LCK+G + A +
Sbjct: 342 -----TYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFD 396
Query: 181 LYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATY------------------------ 216
+ M+ KG+ P+ +TY ++ + R+D+
Sbjct: 397 MLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYG 456
Query: 217 -----------FRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVK-KLKMDDA 264
F M G+ P++A N + L + G + EA+ F+ + K L D
Sbjct: 457 KSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSV 516
Query: 265 SYKFMMKALSDGGKLDEILEIVGGILDDG 293
+Y +MK S G++D+ +++ ++ G
Sbjct: 517 TYNMLMKCYSKAGQIDKATQLLSEMISKG 545
Score = 81.6 bits (200), Expect = 6e-13, Method: Composition-based stats.
Identities = 61/279 (21%), Positives = 128/279 (45%), Gaps = 11/279 (3%)
Query: 10 PVVYSYLML--GFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAM 67
P +SY++ + + GD FE +K++ G++ + + G EA
Sbjct: 443 PTAFSYVLFIDYYGKSGDPAKAIDTFETMKKR--GIMPSIAACNASLYTLAETGRISEAE 500
Query: 68 ECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSF 127
+ +N+ + +V N ++ G+ D+A +L M ++ P + +N
Sbjct: 501 DIFNDL--HKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIIN---- 554
Query: 128 NVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSD 187
+ + GR A ++F ++ + +P +++N L+ L K G + +A EL+G M++
Sbjct: 555 -SLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTE 613
Query: 188 KGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDE 247
G P+ T+ L+D + + VD F +M P++ YN ++ L++ G +D
Sbjct: 614 SGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDY 673
Query: 248 AKSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIV 286
A FF M K L D + ++ + G++++ +++V
Sbjct: 674 AFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVV 712
Score = 75.1 bits (183), Expect = 5e-11, Method: Composition-based stats.
Identities = 67/285 (23%), Positives = 112/285 (39%), Gaps = 10/285 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G D + Y+ L+ G D L+ +K + D V Y +LM + G
Sbjct: 299 EGCGPDVITYTVLIDALCAAGKLDKAKELY--VKMRASSHSPDRVTYITLMDKFGKVGDL 356
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
E +NE E V +++ALC +G D A + D M + P N
Sbjct: 357 ETVKRFWNEM--EVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFP-----N 409
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
L ++N M G R +A+E+ M P S+ ID K+G A+A + +
Sbjct: 410 LHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFE 469
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +G+ P + E R+ + F + GL P+ YN L+ + G
Sbjct: 470 TMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAG 529
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVG 287
+D+A M+ K + D ++ L G++D ++ G
Sbjct: 530 QIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFG 574
Score = 57.8 bits (138), Expect = 1e-05, Method: Composition-based stats.
Identities = 70/324 (21%), Positives = 130/324 (40%), Gaps = 50/324 (15%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKE-KLGGVVSDGVVYGSLMKGYFM 59
M KG D ++ + L+ + G D +++F LK KL V V Y L+ G
Sbjct: 541 MISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTV---VTYNILLTGLGK 597
Query: 60 KGMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKR 119
+G +A+E + S + + NS+LD L N D ALK+F RM + P
Sbjct: 598 EGKILKALELFGSMT--ESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDV 655
Query: 120 LAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEA- 178
L ++N + G +GR A F +M ++ SPD ++ LI + ++G + +A
Sbjct: 656 L-----TYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAI 709
Query: 179 ---------------EELYGEMSD--------------------KGVNPDEYTYGLLMDA 203
+ +GE+ + V D++ L+
Sbjct: 710 KVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKV 769
Query: 204 CFEVNRVDDGATYFRKMVDS-GLRPNLAVYNRLVGKLVQVGMLDEAKSFF-DIMVKKLKM 261
+ + D F K + G+ P L YN L+ L+ ++A F D+
Sbjct: 770 LCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHP 829
Query: 262 DDASYKFMMKALSDGGKLDEILEI 285
++ +Y ++ A +++++ ++
Sbjct: 830 NNFTYNLLLDAHGKSKRINKLYDL 853
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 9/254 (3%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G AD V ++ L+ G + G +LF E+ D V Y +L+ GY G E
Sbjct: 249 GIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAA--AQATPDNVTYTTLIDGYCRAGNIE 306
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA++ E E + + N++L LC +GK E +L + M +++ +
Sbjct: 307 EAVKLRGEM--EATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDE-----RKVQADH 359
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+ N + + YC +G A +V +KM E + ++ LI CK L EA+E + +
Sbjct: 360 VTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQ 419
Query: 185 MSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGM 244
M D G +P+ + L+D + N D +++ GL P+ AVY L+ +L + G+
Sbjct: 420 MVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGL 479
Query: 245 LDEAKSFFDIMVKK 258
+D+A+ FD M K
Sbjct: 480 VDQAQKVFDQMQSK 493
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 127/286 (44%), Gaps = 10/286 (3%)
Query: 9 DPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAME 68
DP V S+L+L + R+F++++ + G+ D +L+ M A
Sbjct: 113 DPRVPSWLVLVLAQSARPHDALRVFDQMRAR--GLAPDAHACTALLTALARARMTATARR 170
Query: 69 CYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFN 128
++E + + +S N++L G A L RM P R S+N
Sbjct: 171 VFDEMA--RAGLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRF-----SYN 223
Query: 129 VMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ YC +G +A+ V +M + DT+++N+LI LCK G + EA +L+ EM+
Sbjct: 224 TVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAA 283
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
PD TY L+D +++ +M +G+ P +A YN ++ KL + G + E
Sbjct: 284 QATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEV 343
Query: 249 KSFFDIM-VKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDG 293
+ M +K++ D + ++ A G + ++ +++ G
Sbjct: 344 NQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESG 389
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 122/246 (49%), Gaps = 11/246 (4%)
Query: 5 GFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEE 64
G D V Y L+ F + G D ++F E++ G + VY L+ G + +
Sbjct: 296 GIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEA--SGCMPSPHVYCMLINGLGSEERLD 353
Query: 65 EAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL 124
EA++ + + S M N+V+ A C KF A K+ D M+ ++ N
Sbjct: 354 EALKYFEHY--KKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRK-----CKVGPNS 406
Query: 125 GSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGE 184
+++V+ +F++A +F++MG C P ++ ++ C NG + A +++ +
Sbjct: 407 RTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQ 466
Query: 185 MSDKGVNPDEYTYGLLMDA-CFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M +KGV P + + L++ CFE NR+++ YF++M+D G+RP +++ L LVQ G
Sbjct: 467 MGEKGVLPCMHMFSALINGLCFE-NRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVQGG 525
Query: 244 MLDEAK 249
+ A+
Sbjct: 526 RISLAQ 531
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 8/199 (4%)
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
+++++AL +F L + M+ R ++ +F ++ Y + K+A+E F
Sbjct: 165 HNLIEALGKIKQFRLVWSLVETMRC------RGLLSKDTFKLIVRRYARARKVKEAVETF 218
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKG-VNPDEYTYGLLMDACFE 206
KM + + +N LID L K+ + +A+ +Y EM KG PD TY +LM+
Sbjct: 219 EKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGH 278
Query: 207 VNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA-KSFFDIMVKKLKMDDAS 265
+ T +++M+D+G+RP++ Y L+ + G DEA K F+++
Sbjct: 279 EKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHV 338
Query: 266 YKFMMKALSDGGKLDEILE 284
Y ++ L +LDE L+
Sbjct: 339 YCMLINGLGSEERLDEALK 357
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 140/311 (45%), Gaps = 10/311 (3%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ ++ G + GD + L E++K K G D + Y +L+ G+ + A E E
Sbjct: 260 YTSVIGGHCKAGDMGKAYHLLEDMKRK--GYQGDNLTYNTLIHGHCRLQEIDRAYELLEE 317
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ N V + ++ LC + EA L ++NE + N+ S+N + D
Sbjct: 318 -MKSNDFVP-DIFTYDILIAGLCRAKRLSEARDLLGTLRNEDD----CTPNVVSYNTLID 371
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
G+ R DA ++F +M PD ++++ LI LC G +EA EM K + P
Sbjct: 372 GFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILP 431
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
Y ++ +D +T F MV +G +PNLAVYN L+ L + G L +AK
Sbjct: 432 KVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRV 491
Query: 253 DIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSK 311
M ++ D +Y ++ L + DE ++ L+ GIE SE V L
Sbjct: 492 KEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQ-GIEISETSCNVVIASLRC 550
Query: 312 EGREEEVVKLM 322
+ + V++++
Sbjct: 551 LEQAQRVLRVV 561
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 24/228 (10%)
Query: 6 FVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGV------VSDGVVYGSLMKGYFM 59
FV D Y L+ G R + E ++ LG + + V Y +L+ G+
Sbjct: 323 FVPDIFTYDILIAGLCRA-------KRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSK 375
Query: 60 KGMEEEAMECYNEAV--GENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP 117
+A + + E V G++ V V ++++ LCN G+ EA + M + P
Sbjct: 376 AARVNDAYQLFLEMVTAGQHPDV----VTYSTLIRGLCNAGRASEAHSYLEEMVGKKILP 431
Query: 118 KRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAE 177
K + ++ + G C G A VF M C P+ +N+LI LCK G L +
Sbjct: 432 K-----VPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCD 486
Query: 178 AEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
A+ EM+++G +PD TYG L+ +R D+ + + ++ G+
Sbjct: 487 AKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGI 534
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 22/221 (9%)
Query: 35 ELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVANNSVLDAL 94
+L ++L GV+ V G E AM + A G + + N +AL
Sbjct: 54 QLSQRLVGVILHMVKNG------------ESAMVFFGWA-GTRQDFRHTVHTYNCFYEAL 100
Query: 95 CNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYR 154
G+ +EA +LF + P+ L + ++ ++ G C G+ K A ++ +M +
Sbjct: 101 IRTGQCEEAYRLF-----KEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRG 155
Query: 155 CSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGA 214
P L+ L++ LCK+G L A + +MS P T+ +L+D F RVD+
Sbjct: 156 LRPVVLTCKFLLNALCKSGNLELALRYFEKMSSI---PCAATWTILIDGLFRAIRVDEAC 212
Query: 215 TYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIM 255
YF +M + + PN Y ++ LV+ G + EA+ M
Sbjct: 213 YYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEM 252
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 142/381 (37%), Gaps = 69/381 (18%)
Query: 11 VVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECY 70
V Y+ L+ GF + + ++LF E+ G D V Y +L++G G EA
Sbjct: 364 VSYNTLIDGFSKAARVNDAYQLFLEMVT--AGQHPDVVTYSTLIRGLCNAGRASEAHSYL 421
Query: 71 NEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNL------ 124
E VG+ K+ + SV+ LC G+ D A +FD M P N
Sbjct: 422 EEMVGKKILPKVPVYS--SVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLC 479
Query: 125 ------------------------GSFNVMADGYCGQGRFKDAIEVFRK----------- 149
++ + G C R +A +++ +
Sbjct: 480 KTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISET 539
Query: 150 -----MGEYRC----------------SPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDK 188
+ RC SP + +I+ LCK LAEA +L +M
Sbjct: 540 SCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGA 599
Query: 189 GVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEA 248
G+ PD T L+ A ++ + +MV G +P++ Y+ L+ L + G EA
Sbjct: 600 GIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEA 659
Query: 249 KSFFDIMVKKLKM--DDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVK 306
++ D+ Y ++ A S+ +++E ++ + GI+ +K
Sbjct: 660 HVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLK 719
Query: 307 GELSKEGREEEVVKLMEKKER 327
G L + + V +L+ + +R
Sbjct: 720 G-LFRTRNLQMVYELLREMKR 739
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 137/344 (39%), Gaps = 43/344 (12%)
Query: 12 VYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYN 71
Y+ +R G + +RLF+E + ++ D + YG L++G G + A Y
Sbjct: 92 TYNCFYEALIRTGQCEEAYRLFKEKWPQ--ELIPDSITYGILIRGLCNFGKLKLACSLYE 149
Query: 72 EAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPP-------------- 117
E V + ++ + +L+ALC +G + AL+ F++M +
Sbjct: 150 EMV--DRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIR 207
Query: 118 -----------KRLAV-NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNL 165
K A+ N ++ V+ +G G+ +A V ++M P ++ ++
Sbjct: 208 VDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMP----VPTLANYTSV 263
Query: 166 IDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGL 225
I CK G + +A L +M KG D TY L+ + +D +M +
Sbjct: 264 IGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDF 323
Query: 226 RPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKKLKMDDA-----SYKFMMKALSDGGKLD 280
P++ Y+ L+ L + L EA+ + + DD SY ++ S +++
Sbjct: 324 VPDIFTYDILIAGLCRAKRLSEARDLLGTLRNE---DDCTPNVVSYNTLIDGFSKAARVN 380
Query: 281 EILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEVVKLMEK 324
+ ++ ++ G ++G L GR E +E+
Sbjct: 381 DAYQLFLEMVTAGQHPDVVTYSTLIRG-LCNAGRASEAHSYLEE 423
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 123/275 (44%), Gaps = 10/275 (3%)
Query: 4 KGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGME 63
+G V V Y+ L+ F + G+ R+ +E+++ G D V Y L Y G
Sbjct: 280 RGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMED--SGCQPDAVTYNELAGTYARAGFF 337
Query: 64 EEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVN 123
EEA +C + + + + N+V+ A N G+ DEAL LFDRMK P N
Sbjct: 338 EEAAKCLDTMTSKG--LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVP-----N 390
Query: 124 LGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYG 183
+ ++N++ + RF +E+ +M C+P+ +++N ++ K GM +
Sbjct: 391 VNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLN 450
Query: 184 EMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVG 243
M GV TY L+ A + +M+ SG P L YN L+ L + G
Sbjct: 451 GMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQG 510
Query: 244 MLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGG 277
A+S M+K K +D SY +++ + GG
Sbjct: 511 DWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGG 545
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 132/296 (44%), Gaps = 24/296 (8%)
Query: 13 YSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEAMECYNE 72
Y+ ++ R G + +LF EL+ + GVV V Y ++ Y G + E
Sbjct: 183 YTTVLHALSRAGRYERALQLFAELRRQ--GVVPTIVTYNVVLDVYGRMGRSWPRIVALLE 240
Query: 73 AVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMAD 132
+ + V+ ++V+ A +G D+A+ F+ +K + P + ++N +
Sbjct: 241 EM-RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVP-----CVVTYNALLQ 294
Query: 133 GYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNP 192
+ G + +A+ V ++M + C PD +++N L + G EA + M+ KG+ P
Sbjct: 295 VFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLP 354
Query: 193 DEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFF 252
+ +TY +M A V RVD+ F +M +G PN+ YN + G L + KS F
Sbjct: 355 NTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGK-------KSRF 407
Query: 253 DIMVKKLK--------MDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEE 300
M++ L+ + ++ M+ G D + ++ G + G+E S +
Sbjct: 408 TAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNG-MKSCGVELSRD 462
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 117/249 (46%), Gaps = 8/249 (3%)
Query: 81 KMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGR- 139
++ A +VL AL G+++ AL+LF ++ + P + ++NV+ D Y GR
Sbjct: 177 RLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVP-----TIVTYNVVLDVYGRMGRS 231
Query: 140 FKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGL 199
+ + + +M PD + + +I ++G+L +A + ++ +G P TY
Sbjct: 232 WPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNA 291
Query: 200 LMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMVKK- 258
L+ + + ++M DSG +P+ YN L G + G +EA D M K
Sbjct: 292 LLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKG 351
Query: 259 LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEELQEFVKGELSKEGREEEV 318
L + +Y +M A ++ G++DE L + + +G + + + G L K+ R +
Sbjct: 352 LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVP-NVNTYNLIFGMLGKKSRFTAM 410
Query: 319 VKLMEKKER 327
++++E+ R
Sbjct: 411 LEMLEEMSR 419
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 123 NLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELY 182
+L FN M Y G + A E+F + + SPD +++N+L+D K+ EAE++
Sbjct: 600 DLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKIL 659
Query: 183 GEMSDKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQV 242
++ V PD +Y +++ + + + +M+ G+ P + Y+ LVG +
Sbjct: 660 KQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASL 719
Query: 243 GMLDEAKSFFDIMVKK-LKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFSEEL 301
M +EA+ + M+ LK + +Y+ ++ + + DE E + I D F ++L
Sbjct: 720 EMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI-SDTDQNFDQKL 778
Query: 302 QEFVKGEL 309
Q ++ +
Sbjct: 779 QHMLEARI 786
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 119/304 (39%), Gaps = 41/304 (13%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEK---------------LG---- 41
M KG + + Y+ +M + G D LF+ +K+ LG
Sbjct: 347 MTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSR 406
Query: 42 --------------GVVSDGVVYGSLMKGYFMKGMEEEAMECYNEAVGENSSVKMSAVAN 87
G + V + +++ +GME+ N ++ V++S
Sbjct: 407 FTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGM--KSCGVELSRDTY 464
Query: 88 NSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYCGQGRFKDAIEVF 147
N+++ A G A K++D M + P L ++N + + QG + A +
Sbjct: 465 NTLISAYGRCGSRTYAFKMYDEMISSGFTP-----CLTTYNALLNVLSRQGDWSTAQSIV 519
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
KM + P+ S++ L+ K G A E + E+ + P L+ A F+
Sbjct: 520 SKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKC 579
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFD-IMVKKLKMDDASY 266
R++ F+++ G +P+L ++N ++ + G+ +A FD I L D +Y
Sbjct: 580 RRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITY 639
Query: 267 KFMM 270
+M
Sbjct: 640 NSLM 643
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 12/214 (5%)
Query: 89 SVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGSFNVMADGYC-GQGRFKDAIEVF 147
SVL L + A + + M+ PP + S NV+ +C G A+ +F
Sbjct: 154 SVLAILVEENQLKSAFRFYRDMRKMGIPP-----TVTSLNVLIKAFCKNSGTMDKAMHLF 208
Query: 148 RKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEV 207
R M + C PD+ ++ LI+ LC+ + EA+EL EM KG +P TY ++ ++
Sbjct: 209 RTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQL 268
Query: 208 NRVDDGATYFRKMVDSGLRPNLAVYNRLVGKLVQVGMLDEAKSFFDIMV-KKLKMDDASY 266
N VD+ M D + PN+ Y+ L+ + G A+ ++M+ K+L+ + SY
Sbjct: 269 NNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISY 328
Query: 267 KFMMKALSDGGKLDEILEI-----VGGILDDGGI 295
++ L + GK++E LEI + G D G+
Sbjct: 329 STLLNGLCNEGKINEALEIFDRMKLQGFKPDAGL 362
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 148/325 (45%), Gaps = 21/325 (6%)
Query: 10 PVVYSY--LMLGFVRD-GDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMKGMEEEA 66
P V S L+ F ++ G D LF + G D YG+L+ G EA
Sbjct: 182 PTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNH--GCEPDSYTYGTLINGLCRFRSIVEA 239
Query: 67 MECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRLAVNLGS 126
E E E S V S++ LC DEA++L + MK+++ P N+ +
Sbjct: 240 KELLQEM--ETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEP-----NVFT 292
Query: 127 FNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSFNNLIDQLCKNGMLAEAEELYGEMS 186
++ + DG+C G A ++ M + R P+ +S++ L++ LC G + EA E++ M
Sbjct: 293 YSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMK 352
Query: 187 DKGVNPDEYTYGLLMDACFEVNRVDDGATYFRKMVDSGLRPN-------LAVYNRLVGKL 239
+G PD YG +++ +V+R + A + +MV G++PN + +NR++ L
Sbjct: 353 LQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGL 412
Query: 240 VQVGMLDEA-KSFFDIMVKKLKMDDASYKFMMKALSDGGKLDEILEIVGGILDDGGIEFS 298
+ + A + + ++ + + + ++ ++K + L + I+ ++ +G I
Sbjct: 413 CTINNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQG 472
Query: 299 EELQEFVKGELSKEGREEEVVKLME 323
E V E + + +KL++
Sbjct: 473 EMWSTMVNC-FCDERKACDAMKLLQ 496
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 1 MFVKGFVADPVVYSYLMLGFVRDGDSDGVFRLFEELKEKLGGVVSDGVVYGSLMKGYFMK 60
M KG V Y+ ++ G + + D RL E++K+K + + Y SLM G+
Sbjct: 246 METKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDK--NIEPNVFTYSSLMDGFCKT 303
Query: 61 GMEEEAMECYNEAVGENSSVKMSAVANNSVLDALCNNGKFDEALKLFDRMKNEHNPPKRL 120
G A + + + ++ + ++ +++L+ LCN GK +EAL++FDRMK + P
Sbjct: 304 GHSSRARDILELMIQKR--LRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKP--- 358
Query: 121 AVNLGSFNVMADGYCGQGRFKDAIEVFRKMGEYRCSPDTLSF-------NNLIDQLCKNG 173
+ G + + + C RF++A +M P+ +++ N +I LC
Sbjct: 359 --DAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTIN 416
Query: 174 MLAEAEELYGEMSDKGVNPDEYTYGLLMDACFEVNRVDDGAT--YFRKMVDSGLRPNLAV 231
A +LY + +G++ T+ L+ CF N+ D T +MV +G P +
Sbjct: 417 NSNRAFQLYLSVLTRGISITVDTFNSLL-KCF-CNKKDLPKTSRILDEMVINGCIPQGEM 474
Query: 232 YNRLVG------------KLVQVGMLD 246
++ +V KL+Q+ ++D
Sbjct: 475 WSTMVNCFCDERKACDAMKLLQLQLMD 501
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.133 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,083,423,572
Number of Sequences: 23463169
Number of extensions: 258271072
Number of successful extensions: 1182489
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8372
Number of HSP's successfully gapped in prelim test: 5336
Number of HSP's that attempted gapping in prelim test: 1029438
Number of HSP's gapped (non-prelim): 68957
length of query: 407
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 262
effective length of database: 8,957,035,862
effective search space: 2346743395844
effective search space used: 2346743395844
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 78 (34.7 bits)