Query 015418
Match_columns 407
No_of_seqs 182 out of 551
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 12:16:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015418.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015418hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hqf_A Thrombospondin-related 98.5 6.8E-07 2.3E-11 84.3 10.7 151 100-285 21-179 (281)
2 4hqo_A Sporozoite surface prot 98.4 1E-06 3.6E-11 82.9 9.8 149 101-284 19-175 (266)
3 3n2n_F Anthrax toxin receptor 98.3 4.4E-06 1.5E-10 72.5 11.4 147 101-285 8-158 (185)
4 3ibs_A Conserved hypothetical 98.3 2.4E-06 8.3E-11 76.2 8.9 139 101-275 12-150 (218)
5 2xgg_A Microneme protein 2; A/ 98.2 7.9E-06 2.7E-10 71.7 11.6 136 101-275 18-162 (178)
6 1shu_X Anthrax toxin receptor 98.2 2.6E-06 8.9E-11 73.8 8.2 147 101-285 7-155 (182)
7 1q0p_A Complement factor B; VO 98.2 1.7E-06 5.9E-11 77.1 7.0 156 100-284 15-190 (223)
8 4fx5_A VON willebrand factor t 98.2 3.1E-06 1.1E-10 86.9 9.3 151 100-284 77-230 (464)
9 1n3y_A Integrin alpha-X; alpha 98.1 2.3E-06 7.8E-11 75.3 5.9 143 101-284 10-165 (198)
10 1atz_A VON willebrand factor; 98.1 1.4E-05 4.8E-10 70.3 9.3 142 101-284 6-156 (189)
11 2b2x_A Integrin alpha-1; compu 98.0 3.4E-05 1.2E-09 69.8 11.1 132 101-275 23-164 (223)
12 1ijb_A VON willebrand factor; 98.0 1.7E-05 5.9E-10 71.1 8.9 144 101-283 14-166 (202)
13 4b4t_W RPN10, 26S proteasome r 98.0 2.9E-05 9.9E-10 75.1 10.6 162 103-300 6-174 (268)
14 2odp_A Complement C2; C3/C5 co 98.0 1.3E-05 4.4E-10 81.1 8.3 154 100-285 9-185 (509)
15 1pt6_A Integrin alpha-1; cell 98.0 4.7E-05 1.6E-09 68.3 11.0 132 101-275 8-149 (213)
16 2x31_A Magnesium-chelatase 60 97.9 1.2E-06 4.2E-11 76.8 -0.2 153 101-284 6-161 (189)
17 2x5n_A SPRPN10, 26S proteasome 97.9 9.7E-05 3.3E-09 67.3 11.5 162 102-302 4-172 (192)
18 1mf7_A Integrin alpha M; cell 97.9 3E-06 1E-10 74.7 1.4 143 101-284 6-161 (194)
19 1rrk_A Complement factor B; BB 97.8 5.7E-05 1.9E-09 75.8 9.7 153 101-285 2-177 (497)
20 3hrz_D Complement factor B; se 97.8 6.3E-05 2.1E-09 79.3 10.0 157 100-285 243-419 (741)
21 1v7p_C Integrin alpha-2; snake 97.7 0.00024 8.2E-09 63.1 11.3 131 101-274 7-147 (200)
22 3zqk_A VON willebrand factor; 97.3 0.00019 6.5E-09 64.1 4.3 137 101-285 22-169 (199)
23 3k6s_A Integrin alpha-X; cell 97.2 0.00059 2E-08 76.9 8.2 142 101-285 131-287 (1095)
24 1mjn_A Integrin alpha-L; rossm 97.2 0.001 3.5E-08 58.3 8.0 138 101-284 3-151 (179)
25 1jey_A KU70; double-strand DNA 96.8 0.0081 2.8E-07 63.5 12.5 160 96-278 33-212 (609)
26 1jey_B KU80; double-strand DNA 96.6 0.0076 2.6E-07 63.0 10.3 150 96-275 4-170 (565)
27 1yvr_A RO autoantigen, 60-kDa 96.4 0.025 8.5E-07 58.6 12.9 139 101-278 369-507 (538)
28 2nvo_A RO sixty-related protei 95.5 0.096 3.3E-06 54.5 12.0 140 101-277 363-502 (535)
29 2ww8_A RRGA, cell WALL surface 88.4 2.1 7.1E-05 47.6 10.8 123 101-237 225-392 (893)
30 2iue_A Pactolus I-domain; memb 82.3 2.1 7.1E-05 39.9 6.1 108 101-237 4-118 (212)
31 3fcs_B Integrin beta-3; beta p 66.7 6.8 0.00023 42.3 5.9 49 188-236 200-255 (690)
32 3rag_A Uncharacterized protein 62.8 9.2 0.00031 36.4 5.3 92 101-219 135-227 (242)
33 3rag_A Uncharacterized protein 62.0 5 0.00017 38.2 3.4 42 223-276 9-50 (242)
34 3k6s_B Integrin beta-2; cell r 38.6 15 0.0005 39.8 2.7 47 189-236 193-246 (687)
35 3otr_A Enolase; structural gen 31.0 80 0.0027 32.6 6.6 144 83-269 228-381 (452)
36 3qtp_A Enolase 1; glycolysis, 28.5 97 0.0033 31.9 6.7 145 83-269 224-378 (441)
37 3v4v_B Integrin beta-7; cell a 23.9 59 0.002 34.1 4.1 48 189-237 221-275 (503)
38 3t3p_B Integrin beta-3; integr 23.9 66 0.0022 33.4 4.5 49 189-237 201-256 (472)
39 3vi3_B Integrin beta-1; beta p 20.8 1E+02 0.0035 31.8 5.1 49 188-237 209-264 (454)
No 1
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=98.46 E-value=6.8e-07 Score=84.35 Aligned_cols=151 Identities=15% Similarity=0.181 Sum_probs=101.4
Q ss_pred eeceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHH-HHHHHHHhhcccccCC---CCccceEeecCCCCCCCCccccC
Q 015418 100 SSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPY-EQAISIIGKTLAVFDE---DNLIPCYGFGDASTHDQDVFSFY 175 (407)
Q Consensus 100 ~~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~Y-qqAI~~Ig~vL~~yD~---Dk~iPvfGFGa~~t~~~~vFsf~ 175 (407)
.+++++.||-|+|++. ..+ +++...+..++..++. +-.|-++.|+.... .+|.|+
T Consensus 21 ~~div~vlD~SgSM~~------------------~~~~~~~k~~~~~~v~~l~~~~~~~rvglv~Fs~~~~---~~~~l~ 79 (281)
T 4hqf_A 21 EVDLYLLMDGSGSIRR------------------HNWVNHAVPLAMKLIQQLNLNDNAIHLYASVFSNNAR---EIIRLH 79 (281)
T ss_dssp CEEEEEEEECCCCSST------------------HHHHHHHHHHHHHHHTTCCCCTTSEEEEEEEEETTEE---EEEEEC
T ss_pred ceeEEEEEeCCCCcCH------------------HHHHHHHHHHHHHHHHHhccCCCCcEEEEEEcCCCce---EEEEcc
Confidence 3789999999999952 133 5555555566666654 66799999987643 234453
Q ss_pred CCCCccCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHHhcCC---ccEEEEEEeCCccccccccccCCCChhHHH
Q 015418 176 SGGRFCYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQSGG---QYHVLLIIADGQVTRSVDTVRGCLSPQEQK 252 (407)
Q Consensus 176 ~~~p~c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive~s~~---~Y~VLLIITDG~Itds~d~~~~~l~~d~~e 252 (407)
.... ...+.++++-..+-......|-|+....|+.|.+.....+. .-.++|+||||..++ ...
T Consensus 80 ~~~~--~~~~~l~~~i~~l~~~~~~~G~T~~~~aL~~a~~~l~~~~~r~~~~~~iillTDG~~~d------------~~~ 145 (281)
T 4hqf_A 80 SDAS--KNKEKALIIIKSLLSTNLPYGKTSLTDALLQVRKHLNDRINRENANQLVVILTDGIPDS------------IQD 145 (281)
T ss_dssp SSCS--SCHHHHHHHHHHHHHTTGGGCSCCHHHHHHHHHHHHHTSCCCTTCEEEEEEEESSCCSC------------HHH
T ss_pred ccCc--cCHHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHhccCCCCCCEEEEEEecCCCCC------------cHH
Confidence 2211 13345544443332233467899999999999887665422 457889999998875 345
Q ss_pred HHHHHHHhcCCCcEEEEEeccCC-CcccccccCC
Q 015418 253 TVDAIVKASELPLSIVLVGVGDG-PWDMMKEFDD 285 (407)
Q Consensus 253 TidaIv~AS~lPLSII~VGVGd~-~F~~M~~LDd 285 (407)
..+++.++...-+-|..||||+. +-+.|+.+-+
T Consensus 146 ~~~~~~~l~~~gv~i~~igiG~~~~~~~L~~iA~ 179 (281)
T 4hqf_A 146 SLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVG 179 (281)
T ss_dssp HHHHHHHHHHTTCEEEEEEESSSCCHHHHHHHTT
T ss_pred HHHHHHHHHHCCCEEEEEeCCCccCHHHHHhhhC
Confidence 66666666678899999999985 5566666643
No 2
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=98.39 E-value=1e-06 Score=82.87 Aligned_cols=149 Identities=14% Similarity=0.263 Sum_probs=101.2
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHH-HHHHHHHhhcccccC---CCCccceEeecCCCCCCCCccccCC
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPY-EQAISIIGKTLAVFD---EDNLIPCYGFGDASTHDQDVFSFYS 176 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~Y-qqAI~~Ig~vL~~yD---~Dk~iPvfGFGa~~t~~~~vFsf~~ 176 (407)
+++++.||-|+|++. ..+ +++...+..++..|+ ++-.|-++.|+.... .+|.|+.
T Consensus 19 ~DivfvlD~SgSM~~------------------~~~~~~~k~~~~~lv~~l~~~~~~~rvglv~Fs~~~~---~~~~l~~ 77 (266)
T 4hqo_A 19 VDLYLLVDGSGSIGY------------------PNWITKVIPMLNGLINSLSLSRDTINLYMNLFGSYTT---ELIRLGS 77 (266)
T ss_dssp EEEEEEEECSTTTCH------------------HHHHHTHHHHHHHHHHTCCBCTTSEEEEEEEESSSEE---EEECTTS
T ss_pred eeEEEEEECCCCcCh------------------hHHHHHHHHHHHHHHHHcccCCCCcEEEEEEecCCcc---eEEecCC
Confidence 689999999999952 234 356666666777776 567889999988642 2344432
Q ss_pred CCCccCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHHhc---CCccEEEEEEeCCccccccccccCCCChhHHHH
Q 015418 177 GGRFCYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQS---GGQYHVLLIIADGQVTRSVDTVRGCLSPQEQKT 253 (407)
Q Consensus 177 ~~p~c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive~s---~~~Y~VLLIITDG~Itds~d~~~~~l~~d~~eT 253 (407)
. .-...+.++++-.++-......|.|+....|+.|.+..... .+.-.++|+||||..+| ....
T Consensus 78 ~--~~~~~~~~~~~i~~l~~~~~~~G~T~~~~AL~~a~~~l~~~~~r~~~~~~iIllTDG~~~d------------~~~~ 143 (266)
T 4hqo_A 78 G--QSIDKRQALSKVTELRKTYTPYGTTSMTAALDEVQKHLNDRVNREKAIQLVILMTDGVPNS------------KYRA 143 (266)
T ss_dssp H--HHHCHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHTTCSCTTSEEEEEEEECSCCSC------------HHHH
T ss_pred C--CccCHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHhhccccCCCCeEEEEEccCCCCC------------chHH
Confidence 1 01123455544443322225679999999999998887654 23457899999999875 3566
Q ss_pred HHHHHHhcCCCcEEEEEeccCCC-cccccccC
Q 015418 254 VDAIVKASELPLSIVLVGVGDGP-WDMMKEFD 284 (407)
Q Consensus 254 idaIv~AS~lPLSII~VGVGd~~-F~~M~~LD 284 (407)
.+++.++-+..+.|..||||+.. -+.|+.+-
T Consensus 144 ~~~a~~l~~~gi~i~~iGiG~~~~~~~L~~iA 175 (266)
T 4hqo_A 144 LEVANKLKQRNVRLAVIGIGQGINHQFNRLIA 175 (266)
T ss_dssp HHHHHHHHHTTCEEEEEECSSSCCHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEecCcccCHHHHHHhh
Confidence 67777777788999999999853 34445554
No 3
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=98.31 E-value=4.4e-06 Score=72.48 Aligned_cols=147 Identities=14% Similarity=0.140 Sum_probs=94.1
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccCCCCccceEeecCCCCCCCCccccCCCCCc
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFSFYSGGRF 180 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD~Dk~iPvfGFGa~~t~~~~vFsf~~~~p~ 180 (407)
+++++.||-|+|+... + ....++++.+..-+ ..++-.+-++.|+..... ++.+..
T Consensus 8 ~div~vlD~SgSM~~~-----------~-----~~~~~~~~~~~~~~--~~~~~~v~lv~f~~~~~~---~~~l~~---- 62 (185)
T 3n2n_F 8 FDLYFILDKSGSVLHH-----------W-----NEIYYFVEQLAHKF--ISPQLRMSFIVFSTRGTT---LMKLTE---- 62 (185)
T ss_dssp EEEEEEEECSGGGGGG-----------H-----HHHHHHHHHHHHHC--CCTTEEEEEEEESSSEEE---EEEEEC----
T ss_pred eeEEEEEeCCCChhhh-----------H-----HHHHHHHHHHHHHh--CCCCcEEEEEEEecCceE---EeccCC----
Confidence 6899999999999510 1 12333444443333 234568999999875432 344432
Q ss_pred cCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHH--hcC--CccEEEEEEeCCccccccccccCCCChhHHHHHHH
Q 015418 181 CYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVE--QSG--GQYHVLLIIADGQVTRSVDTVRGCLSPQEQKTVDA 256 (407)
Q Consensus 181 c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive--~s~--~~Y~VLLIITDG~Itds~d~~~~~l~~d~~eTida 256 (407)
..+.+.++-.++ +.+...|.|+....|+.+.+... ..+ ..-.++++||||..++.. .....++
T Consensus 63 --~~~~~~~~i~~l-~~~~~~g~T~~~~al~~a~~~l~~~~~~~~~~~~~iillTDG~~~~~~----------~~~~~~~ 129 (185)
T 3n2n_F 63 --DREQIRQGLEEL-QKVLPGGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHEDL----------FFYSERE 129 (185)
T ss_dssp --CHHHHHHHHHHH-HTCCCCSCCCHHHHHHHHHHHHHHHHTTCBCEEEEEEEEECCCCCHHH----------HHHHHHH
T ss_pred --CHHHHHHHHHHH-hhhcCCCCccHHHHHHHHHHHHhhccccCCCCCcEEEEEcCCCCCCCc----------ccchHHH
Confidence 344443333322 22245799999999999998652 222 245788999999987521 2234566
Q ss_pred HHHhcCCCcEEEEEeccCCCcccccccCC
Q 015418 257 IVKASELPLSIVLVGVGDGPWDMMKEFDD 285 (407)
Q Consensus 257 Iv~AS~lPLSII~VGVGd~~F~~M~~LDd 285 (407)
+..+.+..+-|..||||+.+...|+++-+
T Consensus 130 ~~~~~~~gi~i~~igvg~~~~~~L~~iA~ 158 (185)
T 3n2n_F 130 ANRSRDLGAIVYAVGVKDFNETQLARIAD 158 (185)
T ss_dssp HHHHHHTTEEEEEEECSSCCHHHHTTTSS
T ss_pred HHHHHHCCCEEEEEEeccCCHHHHHHHhC
Confidence 66677788999999999877777777653
No 4
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=98.27 E-value=2.4e-06 Score=76.20 Aligned_cols=139 Identities=19% Similarity=0.258 Sum_probs=95.7
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccCCCCccceEeecCCCCCCCCccccCCCCCc
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFSFYSGGRF 180 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD~Dk~iPvfGFGa~~t~~~~vFsf~~~~p~ 180 (407)
.++++.||.|+||...+ ..++..+.|...+..++..+. +..+-++.|+.... .++.+..
T Consensus 12 ~~iv~vlD~SgSM~~~d-------------~~~~r~~~ak~~~~~~~~~~~-~~~v~lv~F~~~~~---~~~~~~~---- 70 (218)
T 3ibs_A 12 VEVIIALDISNSMLAQD-------------VQPSRLEKAKRLISRLVDELD-NDKVGMIVFAGDAF---TQLPITS---- 70 (218)
T ss_dssp CEEEEEEECSGGGGCCS-------------SSSCHHHHHHHHHHHHHHTCS-SCEEEEEEESSSEE---EEEEEES----
T ss_pred CcEEEEEECCcCccccc-------------CCcCHHHHHHHHHHHHHHhCC-CCeEEEEEECCCce---EeCCCCC----
Confidence 57999999999996431 124677888888888887776 55899999987632 2333321
Q ss_pred cCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHHhcCCccEEEEEEeCCccccccccccCCCChhHHHHHHHHHHh
Q 015418 181 CYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQSGGQYHVLLIIADGQVTRSVDTVRGCLSPQEQKTVDAIVKA 260 (407)
Q Consensus 181 c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive~s~~~Y~VLLIITDG~Itds~d~~~~~l~~d~~eTidaIv~A 260 (407)
..+.+.+.-..+-+.+...|.|+....|+.+.+........-.++++||||..++. ...+++..+
T Consensus 71 --~~~~~~~~l~~l~~~~~~~g~T~l~~al~~a~~~l~~~~~~~~~ivllTDG~~~~~-------------~~~~~~~~~ 135 (218)
T 3ibs_A 71 --DYISAKMFLESISPSLISKQGTAIGEAINLATRSFTPQEGVGRAIIVITDGENHEG-------------GAVEAAKAA 135 (218)
T ss_dssp --CHHHHHHHHHTCCGGGCCSCSCCHHHHHHHHHTTSCSCSSCCEEEEEEECCTTCCS-------------CHHHHHHHH
T ss_pred --CHHHHHHHHHhcCcccCCCCCCcHHHHHHHHHHHHhhCCCCCcEEEEEcCCCCCCC-------------cHHHHHHHH
Confidence 34444333333323344578999999999998776655344578899999987651 234555566
Q ss_pred cCCCcEEEEEeccCC
Q 015418 261 SELPLSIVLVGVGDG 275 (407)
Q Consensus 261 S~lPLSII~VGVGd~ 275 (407)
.+..+.|..||||..
T Consensus 136 ~~~~i~v~~igig~~ 150 (218)
T 3ibs_A 136 AEKGIQVSVLGVGMP 150 (218)
T ss_dssp HTTTEEEEEEEESCT
T ss_pred HhcCCEEEEEEecCC
Confidence 678899999999984
No 5
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=98.25 E-value=7.9e-06 Score=71.73 Aligned_cols=136 Identities=14% Similarity=0.093 Sum_probs=90.2
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccCC---CCccceEeecCCCCCCCCccccCCC
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDE---DNLIPCYGFGDASTHDQDVFSFYSG 177 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD~---Dk~iPvfGFGa~~t~~~~vFsf~~~ 177 (407)
.++++.||-|+|++. ..++++...+..++..|+. .-.+-++.|+.... .+|.|+..
T Consensus 18 ~divfvlD~SgSm~~------------------~~~~~~k~~~~~~i~~l~~~~~~~rv~vv~F~~~~~---~~~~l~~~ 76 (178)
T 2xgg_A 18 LDICFLIDSSGSIGI------------------QNFRLVKQFLHTFLMVLPIGPEEVNNAVVTYSTDVH---LQWDLQSP 76 (178)
T ss_dssp EEEEEEEECCTTTCH------------------HHHHHHHHHHHHHHHHSCBSTTSEEEEEEEESSSEE---EEECTTSG
T ss_pred eeEEEEEECCCCCCH------------------HHHHHHHHHHHHHHHhcCCCCCCeEEEEEEeCCceE---EEEeCCCC
Confidence 689999999999952 2566777777777777763 36899999998643 23444321
Q ss_pred CCccCCHHHHHHHHHhhCCcee-ecCCCChHHHHHHHHHHHH-hc----CCccEEEEEEeCCccccccccccCCCChhHH
Q 015418 178 GRFCYGFEEVLSRYREIVPNLK-LAGPTSFAPVIEMAMSIVE-QS----GGQYHVLLIIADGQVTRSVDTVRGCLSPQEQ 251 (407)
Q Consensus 178 ~p~c~G~egVl~aYr~~l~~v~-LsGPT~FAPVI~~ai~ive-~s----~~~Y~VLLIITDG~Itds~d~~~~~l~~d~~ 251 (407)
.....+.++++-.+ +. ..|.|+....|+.|.+... .. ...-.++++||||..++ ..
T Consensus 77 --~~~~~~~~~~~i~~----l~~~~g~T~~~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~~------------~~ 138 (178)
T 2xgg_A 77 --NAVDKQLAAHAVLD----MPYKKGSTNTSDGLKACKQILFTGSRPGREHVPKLVIGMTDGESDS------------DF 138 (178)
T ss_dssp --GGSCHHHHHHHHHH----CCCCCCCCCHHHHHHHHHHHHHHCCCTTCTTSCEEEEEEESSCCCH------------HH
T ss_pred --CccCHHHHHHHHHh----CCCCCCCccHHHHHHHHHHHhcCcccCCCCCCCEEEEEEcCCCCCC------------Cc
Confidence 11144555444332 33 5689999999999998743 21 12347889999999875 12
Q ss_pred HHHHHHHHhcCCCcEEEEEeccCC
Q 015418 252 KTVDAIVKASELPLSIVLVGVGDG 275 (407)
Q Consensus 252 eTidaIv~AS~lPLSII~VGVGd~ 275 (407)
...+++..+-+..+-|..||||+.
T Consensus 139 ~~~~~~~~l~~~gi~v~~igvG~~ 162 (178)
T 2xgg_A 139 RTVRAAKEIRELGGIVTVLAVGHY 162 (178)
T ss_dssp HHSHHHHHHHHTTCEEEEEECC--
T ss_pred cHHHHHHHHHHCCCEEEEEEcCCc
Confidence 344455555566899999999974
No 6
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=98.24 E-value=2.6e-06 Score=73.76 Aligned_cols=147 Identities=12% Similarity=0.133 Sum_probs=94.6
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccCCCCccceEeecCCCCCCCCccccCCCCCc
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFSFYSGGRF 180 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD~Dk~iPvfGFGa~~t~~~~vFsf~~~~p~ 180 (407)
.++++.||.|+|+... . ....+.|.+.+..++. .+-.+-++.|+..... ++.+.
T Consensus 7 ~dvv~vlD~SgSM~~~-----------~----~~~~~~~~~~~~~~~~---~~~~v~lv~f~~~~~~---~~~~~----- 60 (182)
T 1shu_X 7 FDLYFVLDKSGSVANN-----------W----IEIYNFVQQLAERFVS---PEMRLSFIVFSSQATI---ILPLT----- 60 (182)
T ss_dssp EEEEEEEECSGGGGGG-----------H----HHHHHHHHHHHHHCCC---TTEEEEEEEESSSEEE---EEEEE-----
T ss_pred eeEEEEEECCCCcccC-----------H----HHHHHHHHHHHHHhcC---CCceEEEEEeCCCceE---EECCC-----
Confidence 6899999999999521 1 1122233333333333 5678999999875422 23333
Q ss_pred cCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHHhc--CCccEEEEEEeCCccccccccccCCCChhHHHHHHHHH
Q 015418 181 CYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQS--GGQYHVLLIIADGQVTRSVDTVRGCLSPQEQKTVDAIV 258 (407)
Q Consensus 181 c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive~s--~~~Y~VLLIITDG~Itds~d~~~~~l~~d~~eTidaIv 258 (407)
.+.+.+.++-. .+..+...|.|+....|+.+.+..... ...-.++++||||..++. ......+++.
T Consensus 61 -~~~~~~~~~l~-~l~~~~~~g~T~~~~al~~a~~~l~~~~~~~~~~~iiliTDG~~~~~----------~~~~~~~~~~ 128 (182)
T 1shu_X 61 -GDRGKISKGLE-DLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGL----------VPSYAEKEAK 128 (182)
T ss_dssp -CCHHHHHHHHH-HHHTCCCCSCCCHHHHHHHHHHHHHHHTGGGSCEEEEEEECCCCCTT----------HHHHHHHHHH
T ss_pred -CCHHHHHHHHH-hcccCCCCCCchHHHHHHHHHHHHHhccCCCCCeEEEEECCCCcCCC----------CchhHHHHHH
Confidence 12333332222 222344679999999999999987654 234578899999987652 1233455666
Q ss_pred HhcCCCcEEEEEeccCCCcccccccCC
Q 015418 259 KASELPLSIVLVGVGDGPWDMMKEFDD 285 (407)
Q Consensus 259 ~AS~lPLSII~VGVGd~~F~~M~~LDd 285 (407)
.+.+..+.|..||||+.+...|+++-+
T Consensus 129 ~~~~~~i~i~~igvg~~~~~~L~~ia~ 155 (182)
T 1shu_X 129 ISRSLGASVYCVGVLDFEQAQLERIAD 155 (182)
T ss_dssp HHHHTTCEEEEEECSSCCHHHHHHHSS
T ss_pred HHHhCCCEEEEEeCCcCCHHHHHHHhC
Confidence 677788999999999888777877753
No 7
>1q0p_A Complement factor B; VON willebrand factor, MAC-1, I domain, A domain, hydrolase; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=98.23 E-value=1.7e-06 Score=77.09 Aligned_cols=156 Identities=15% Similarity=0.118 Sum_probs=96.8
Q ss_pred eeceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccCCCCccceEeecCCCCCCCCccccCCCCC
Q 015418 100 SSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFSFYSGGR 179 (407)
Q Consensus 100 ~~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD~Dk~iPvfGFGa~~t~~~~vFsf~~~~p 179 (407)
.+++++.||.|+|+... ......+++..+..-+..++.+-.+-++.|+..... ++.| ..+
T Consensus 15 ~~div~vlD~SgSM~~~---------------~~~~~k~~~~~~i~~l~~~~~~~~v~lv~f~~~~~~---~~~~--~~~ 74 (223)
T 1q0p_A 15 SMNIYLVLDGSDSIGAS---------------NFTGAKKSLVNLIEKVASYGVKPRYGLVTYATYPKI---WVKV--SEA 74 (223)
T ss_dssp CEEEEEEEECSTTTCHH---------------HHHHHHHHHHHHHHHHHTTTCCCEEEEEEESSSEEE---EECT--TSG
T ss_pred ceeEEEEEeCCCCCchH---------------HHHHHHHHHHHHHHHHhcCCCCceEEEEEecCccce---eecc--ccC
Confidence 37899999999999631 012344455555554555666678999999876432 2333 222
Q ss_pred ccCCHHHHHHHHHhhCCce-eecCCCChHHHHHHHHHHHHhcC--------CccEEEEEEeCCccccccccccCCCChhH
Q 015418 180 FCYGFEEVLSRYREIVPNL-KLAGPTSFAPVIEMAMSIVEQSG--------GQYHVLLIIADGQVTRSVDTVRGCLSPQE 250 (407)
Q Consensus 180 ~c~G~egVl~aYr~~l~~v-~LsGPT~FAPVI~~ai~ive~s~--------~~Y~VLLIITDG~Itds~d~~~~~l~~d~ 250 (407)
.....+.+.++-..+-+.. ...|.|+....|+.+.+...... ..-.++++||||..+... +.
T Consensus 75 ~~~~~~~~~~~i~~l~~~~~~~~g~T~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~---------~~ 145 (223)
T 1q0p_A 75 DSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGG---------DP 145 (223)
T ss_dssp GGGCHHHHHHHHHTCCTTSCSCTTCCCHHHHHHHHHHHHCCTTSSCCTTGGGCEEEEEEEECSCCCSSS---------CT
T ss_pred CCCCHHHHHHHHHhcccccccCCCCccHHHHHHHHHHHhhccccccccccccCCeEEEEECCCCCCCCC---------Ch
Confidence 2334455554443332221 24799999999999998876431 234788999999876311 12
Q ss_pred HHHHHHHHHh----------cCCCcEEEEEeccC-CCcccccccC
Q 015418 251 QKTVDAIVKA----------SELPLSIVLVGVGD-GPWDMMKEFD 284 (407)
Q Consensus 251 ~eTidaIv~A----------S~lPLSII~VGVGd-~~F~~M~~LD 284 (407)
....+.+.+. .+..+-|..||||. .+...|+++-
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~i~i~~igvG~~~~~~~L~~iA 190 (223)
T 1q0p_A 146 ITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALA 190 (223)
T ss_dssp HHHHHHHHHHTTCSCBTTBCCGGGEEEEEEECSSCCCHHHHHHHS
T ss_pred HHHHHHHHHHHhhhhhhhhcccCCcEEEEEEecCcCCHHHHHHHh
Confidence 3344445432 34678899999996 4666677664
No 8
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=98.21 E-value=3.1e-06 Score=86.86 Aligned_cols=151 Identities=11% Similarity=0.129 Sum_probs=103.4
Q ss_pred eeceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccCCCCccceEeecCCCCCCCCccccCCC--
Q 015418 100 SSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFSFYSG-- 177 (407)
Q Consensus 100 ~~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD~Dk~iPvfGFGa~~t~~~~vFsf~~~-- 177 (407)
.+++++.||.|+||.+. .+..+.|...+..++..+.++..|-++.|+..... ++++...
T Consensus 77 ~~dvv~VLD~SGSM~~~----------------~~rl~~ak~a~~~ll~~L~~~drv~lV~Fs~~a~~---~~p~t~~l~ 137 (464)
T 4fx5_A 77 ENVEVIIIDCSGSMDYP----------------RTKMMAAKEATKVAIDTLTDGAFFAVVAGTEGARV---VYPTGGQLL 137 (464)
T ss_dssp CEEEEEEEECCGGGGTT----------------THHHHHHHHHHHHHHHHSCTTCEEEEEEESSSEEE---EESSSSSCE
T ss_pred CceEEEEEEcCcccCCC----------------CchHHHHHHHHHHHHHhCCCCCEEEEEEEcCceEE---EecCCcccc
Confidence 37999999999999632 24677777777777888877778999999876421 2332100
Q ss_pred CCccCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHHhcCCccEEEEEEeCCccccccccccCCCChhHHHHHHHH
Q 015418 178 GRFCYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQSGGQYHVLLIIADGQVTRSVDTVRGCLSPQEQKTVDAI 257 (407)
Q Consensus 178 ~p~c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive~s~~~Y~VLLIITDG~Itds~d~~~~~l~~d~~eTidaI 257 (407)
.....+.+.+ ++.+..+...|.|++..-|+.+.+...+..+.-.++|+||||..++. ....+...
T Consensus 138 ~~~~~~~~~l----~~~I~~L~~~GgT~l~~aL~~A~~~l~~~~~~~~~IILLTDG~~~~~-----------~~~~l~~~ 202 (464)
T 4fx5_A 138 RADYQSRAAA----KEAVGRLHANGGTAMGRWLAQAGRIFDTAPSAIKHAILLTDGKDESE-----------TPADLARA 202 (464)
T ss_dssp ECSHHHHHHH----HHHHHTCCCCSCCCHHHHHHHHHHHHTTCTTSEEEEEEEESSCCTTS-----------CHHHHHHH
T ss_pred cCCHHHHHHH----HHHHHcCCCCCCCcHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCCCC-----------ChHHHHHH
Confidence 0001122333 34455666789999999999999988765555578899999997641 12234444
Q ss_pred HHhcCCCcEEEEEeccCC-CcccccccC
Q 015418 258 VKASELPLSIVLVGVGDG-PWDMMKEFD 284 (407)
Q Consensus 258 v~AS~lPLSII~VGVGd~-~F~~M~~LD 284 (407)
.++....+.|..||||.. +...|++|-
T Consensus 203 ~~a~~~~i~i~tiGiG~~~d~~~L~~IA 230 (464)
T 4fx5_A 203 IQSSIGNFTADCRGIGEDWEPKELRKIA 230 (464)
T ss_dssp HHHHTTTCEEEEEEESSSSCHHHHHHHH
T ss_pred HHHhcCCCeEEEEEeCCccCHHHHHHHH
Confidence 556677899999999964 666676664
No 9
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=98.14 E-value=2.3e-06 Score=75.29 Aligned_cols=143 Identities=19% Similarity=0.288 Sum_probs=91.8
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhccccc-CCCCccceEeecCCCCCCCCccccCCCCC
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVF-DEDNLIPCYGFGDASTHDQDVFSFYSGGR 179 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~y-D~Dk~iPvfGFGa~~t~~~~vFsf~~~~p 179 (407)
.++++.||-|+|+.. ..++.++..+-.++..+ ..+-.+-++.|+.... .++.++.
T Consensus 10 ~div~vlD~SgSM~~------------------~~~~~~~~~~~~~~~~l~~~~~~v~lv~f~~~~~---~~~~~~~--- 65 (198)
T 1n3y_A 10 QDIVFLIDGSGSISS------------------RNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQ---THFTFEE--- 65 (198)
T ss_dssp EEEEEEEECCTTSCH------------------HHHHHHHHHHHHHHTTSCTTTEEEEEEEESSSEE---EEECHHH---
T ss_pred eeEEEEEECCCCCCH------------------HHHHHHHHHHHHHHHhcCCCCcEEEEEEeCCCcc---EEEecCc---
Confidence 689999999999952 14556666666677777 5778899999998632 1233311
Q ss_pred ccCCHHHHHHHHHhhCCcee-ecCCCChHHHHHHHHHH-HHhc----CCccEEEEEEeCCccc-cccccccCCCChhHHH
Q 015418 180 FCYGFEEVLSRYREIVPNLK-LAGPTSFAPVIEMAMSI-VEQS----GGQYHVLLIIADGQVT-RSVDTVRGCLSPQEQK 252 (407)
Q Consensus 180 ~c~G~egVl~aYr~~l~~v~-LsGPT~FAPVI~~ai~i-ve~s----~~~Y~VLLIITDG~It-ds~d~~~~~l~~d~~e 252 (407)
... .+...+.+..+. ..|.|+....|+.+.+. .... ...-.++++||||..+ +.. .
T Consensus 66 ----~~~-~~~~~~~i~~l~~~~g~T~~~~al~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~~~------------~ 128 (198)
T 1n3y_A 66 ----FRR-SSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSL------------D 128 (198)
T ss_dssp ----HHH-CSSGGGGGTTCCCCCSCBCHHHHHHHHHTTTTSGGGTCCTTSEEEEEEEESSCCBSCSS------------C
T ss_pred ----cCC-HHHHHHHHhcCcCCCCCchHHHHHHHHHHHHhCcccCCCCCCceEEEEECCCCCCCCcc------------c
Confidence 000 011223344443 67999999999999844 3332 2345788999999887 321 1
Q ss_pred HHHHHHHhcCCCcEEEEEeccCCC-----cccccccC
Q 015418 253 TVDAIVKASELPLSIVLVGVGDGP-----WDMMKEFD 284 (407)
Q Consensus 253 TidaIv~AS~lPLSII~VGVGd~~-----F~~M~~LD 284 (407)
..+++..+.+..+-|..||||+.. ...|+++-
T Consensus 129 ~~~~~~~~~~~gi~i~~igvG~~~~~~~~~~~L~~iA 165 (198)
T 1n3y_A 129 YKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIA 165 (198)
T ss_dssp HHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHS
T ss_pred HHHHHHHHHHCCCEEEEEEccccccccccHHHHHHHH
Confidence 233445555678899999999863 45555553
No 10
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=98.06 E-value=1.4e-05 Score=70.34 Aligned_cols=142 Identities=13% Similarity=0.180 Sum_probs=93.3
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccC---CCCccceEeecCCCCCCCCccccCCC
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFD---EDNLIPCYGFGDASTHDQDVFSFYSG 177 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD---~Dk~iPvfGFGa~~t~~~~vFsf~~~ 177 (407)
+++++.||-|+|++. +.++++...+..++..++ .+-.+-++.|+.... .+|.|+.
T Consensus 6 ~div~vlD~SgSm~~------------------~~~~~~k~~~~~~~~~l~~~~~~~rv~lv~f~~~~~---~~~~l~~- 63 (189)
T 1atz_A 6 LDVILLLDGSSSFPA------------------SYFDEMKSFAKAFISKANIGPRLTQVSVLQYGSITT---IDVPWNV- 63 (189)
T ss_dssp EEEEEEEECSSSSCH------------------HHHHHHHHHHHHHHHHSCBSTTSEEEEEEEESSSEE---EEECTTC-
T ss_pred eeEEEEEeCCCCCCh------------------hhHHHHHHHHHHHHHhcCcCCCCeEEEEEEECCcce---EEEecCC-
Confidence 689999999999951 356666666666777665 235799999987543 2344431
Q ss_pred CCccCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHHhc-----CCccEEEEEEeCCccccccccccCCCChhHHH
Q 015418 178 GRFCYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQS-----GGQYHVLLIIADGQVTRSVDTVRGCLSPQEQK 252 (407)
Q Consensus 178 ~p~c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive~s-----~~~Y~VLLIITDG~Itds~d~~~~~l~~d~~e 252 (407)
....+.+.++-..+ +. ..|.|+....|+.|.+..... .+.-.++||||||..++. ..+
T Consensus 64 ---~~~~~~~~~~i~~l-~~--~~g~T~~~~aL~~a~~~l~~~~~g~r~~~~~~vivltdg~~~~~-----------~~~ 126 (189)
T 1atz_A 64 ---VPEKAHLLSLVDVM-QR--EGGPSQIGDALGFAVRYLTSEMHGARPGASKAVVILVTDVSVDS-----------VDA 126 (189)
T ss_dssp ---CCCHHHHHHHHHTC-CC--CCCCCCHHHHHHHHHHHHHSCCTTCCTTSEEEEEEEECSCCSSC-----------CHH
T ss_pred ---CCCHHHHHHHHHhC-cC--CCCcchHHHHHHHHHHHHhccccCCCCCCCcEEEEEeCCCCCch-----------HHH
Confidence 12455555544432 21 468899999999999876542 223567888999987652 234
Q ss_pred HHHHHHHhcCCCcEEEEEeccC-CCcccccccC
Q 015418 253 TVDAIVKASELPLSIVLVGVGD-GPWDMMKEFD 284 (407)
Q Consensus 253 TidaIv~AS~lPLSII~VGVGd-~~F~~M~~LD 284 (407)
..+.+ .+..+-|..||||+ .+-..|+.+-
T Consensus 127 ~~~~~---~~~gi~v~~igvG~~~~~~~L~~iA 156 (189)
T 1atz_A 127 AADAA---RSNRVTVFPIGIGDRYDAAQLRILA 156 (189)
T ss_dssp HHHHH---HHTTEEEEEEEESSSSCHHHHHHHT
T ss_pred HHHHH---HHCCCEEEEEEcCCcCCHHHHHHHH
Confidence 44444 45788999999998 3555555553
No 11
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=98.01 E-value=3.4e-05 Score=69.84 Aligned_cols=132 Identities=19% Similarity=0.270 Sum_probs=87.8
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccC---CCCccceEeecCCCCCCCCccccCCC
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFD---EDNLIPCYGFGDASTHDQDVFSFYSG 177 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD---~Dk~iPvfGFGa~~t~~~~vFsf~~~ 177 (407)
+++++.||-|+|+. .++++...+..++..++ ++-.+-++.|+.... .+|.|.
T Consensus 23 ~div~vlD~SgSM~--------------------~~~~~k~~~~~~~~~l~~~~~~~rv~lv~F~~~~~---~~~~l~-- 77 (223)
T 2b2x_A 23 LDIVIVLDGSNSIY--------------------PWESVIAFLNDLLKRMDIGPKQTQVGIVQYGENVT---HEFNLN-- 77 (223)
T ss_dssp EEEEEEEECSTTCC--------------------CHHHHHHHHHHHHTTSCCSTTSCCEEEEEESSSEE---EEECTT--
T ss_pred ceEEEEEECCCChh--------------------hHHHHHHHHHHHHHhcccCCCCeEEEEEEeCCCcc---EEEecC--
Confidence 68999999999984 14566666666666665 577899999987542 234442
Q ss_pred CCccCCHHHHHHHHHhhCCcee-ecC-CCChHHHHHHHHHH-HHh----cCCccEEEEEEeCCccccccccccCCCChhH
Q 015418 178 GRFCYGFEEVLSRYREIVPNLK-LAG-PTSFAPVIEMAMSI-VEQ----SGGQYHVLLIIADGQVTRSVDTVRGCLSPQE 250 (407)
Q Consensus 178 ~p~c~G~egVl~aYr~~l~~v~-LsG-PT~FAPVI~~ai~i-ve~----s~~~Y~VLLIITDG~Itds~d~~~~~l~~d~ 250 (407)
+ ....+.++++- ..+. ..| .|+....|+.|.+. ... ....-.++++||||.-++..
T Consensus 78 ~--~~~~~~~~~~i----~~l~~~gG~~T~~~~aL~~a~~~l~~~~~~~~~~~~~~iillTDG~~~~~~----------- 140 (223)
T 2b2x_A 78 K--YSSTEEVLVAA----NKIVQRGGRQTMTALGIDTARKEAFTEARGARRGVKKVMVIVTDGESHDNY----------- 140 (223)
T ss_dssp T--CCSHHHHHHHH----TTCCCCCCSSCCHHHHHHHHHHTTSSGGGTCCTTSEEEEEEEESSCCTTGG-----------
T ss_pred C--CCCHHHHHHHH----HhhhccCCCCccHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCc-----------
Confidence 1 22455555433 3343 345 49999999999876 321 12345788999999987621
Q ss_pred HHHHHHHHHhcCCCcEEEEEeccCC
Q 015418 251 QKTVDAIVKASELPLSIVLVGVGDG 275 (407)
Q Consensus 251 ~eTidaIv~AS~lPLSII~VGVGd~ 275 (407)
...+++..+.+..+-|..||||+.
T Consensus 141 -~~~~~~~~~~~~gi~v~~igvG~~ 164 (223)
T 2b2x_A 141 -RLKQVIQDCEDENIQRFSIAILGH 164 (223)
T ss_dssp -GHHHHHHHHHTTTEEEEEEEECGG
T ss_pred -cHHHHHHHHHHCCCEEEEEEecCc
Confidence 233445555678899999999974
No 12
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=98.01 E-value=1.7e-05 Score=71.05 Aligned_cols=144 Identities=10% Similarity=0.112 Sum_probs=93.3
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccC---CCCccceEeecCCCCCCCCccccCCC
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFD---EDNLIPCYGFGDASTHDQDVFSFYSG 177 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD---~Dk~iPvfGFGa~~t~~~~vFsf~~~ 177 (407)
+++++.||-|+|++. ..++++...+..++..|+ ++-.+-++.|+.... .+|.|+..
T Consensus 14 ~divfvlD~SgSm~~------------------~~~~~~k~~~~~~v~~l~~~~~~~rv~vv~fs~~~~---~~~~l~~~ 72 (202)
T 1ijb_A 14 LDLVFLLDGSSRLSE------------------AEFEVLKAFVVDMMERLRVSQKWVRVAVVEYHDGSH---AYIGLKDR 72 (202)
T ss_dssp EEEEEEEECBTTSCH------------------HHHHHHHHHHHHHHHTBCBSTTSEEEEEEEESSSEE---EEECTTCC
T ss_pred ccEEEEEECCCCCCH------------------HHHHHHHHHHHHHHHhcccCCCceEEEEEEECCCce---EEEecCCC
Confidence 689999999999852 256777777777777777 455899999987642 23445321
Q ss_pred CCccCCHHHHHHHHHhhCCcee-ecC-CCChHHHHHHHHHHH-Hhc--CCccEEEEEEeCCccccccccccCCCChhHHH
Q 015418 178 GRFCYGFEEVLSRYREIVPNLK-LAG-PTSFAPVIEMAMSIV-EQS--GGQYHVLLIIADGQVTRSVDTVRGCLSPQEQK 252 (407)
Q Consensus 178 ~p~c~G~egVl~aYr~~l~~v~-LsG-PT~FAPVI~~ai~iv-e~s--~~~Y~VLLIITDG~Itds~d~~~~~l~~d~~e 252 (407)
...+.+.++-. .++ ..| .|+....|+.+.+.. .+. ...-.++|+||||.-++. ..+.
T Consensus 73 ----~~~~~~~~~i~----~l~~~gg~~T~~~~aL~~a~~~~~~~~~r~~~~~~iillTDG~~~~~----------~~~~ 134 (202)
T 1ijb_A 73 ----KRPSELRRIAS----QVKYAGSQVASTSEVLKYTLFQIFSKIDRPEASRIALLLMASQEPQR----------MSRN 134 (202)
T ss_dssp ----CCHHHHHHHHH----TCCCCCBSCCCHHHHHHHHHHHTSSSCSCTTSEEEEEEEECCCCCGG----------GCTT
T ss_pred ----CCHHHHHHHHH----hCcCCCCCcCcHHHHHHHHHHHHhccCCCCCCCeEEEEEccCCCCcc----------chHH
Confidence 23445544333 333 245 499999999987543 221 234578999999987641 0112
Q ss_pred HHHHHHHhcCCCcEEEEEeccC-CCccccccc
Q 015418 253 TVDAIVKASELPLSIVLVGVGD-GPWDMMKEF 283 (407)
Q Consensus 253 TidaIv~AS~lPLSII~VGVGd-~~F~~M~~L 283 (407)
..+++.++-+..+-|..||||+ .+.+.|+.+
T Consensus 135 ~~~~a~~l~~~gi~i~~igvG~~~~~~~L~~i 166 (202)
T 1ijb_A 135 FVRYVQGLKKKKVIVIPVGIGPHANLKQIRLI 166 (202)
T ss_dssp HHHHHHHHHHTTEEEEEEEESTTSCHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEecCCcCCHHHHHHH
Confidence 3344444555789999999996 466666666
No 13
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.98 E-value=2.9e-05 Score=75.13 Aligned_cols=162 Identities=10% Similarity=0.160 Sum_probs=110.0
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhccc---ccCCCCccceEeecCCCCCCCCccccCCCCC
Q 015418 103 LIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLA---VFDEDNLIPCYGFGDASTHDQDVFSFYSGGR 179 (407)
Q Consensus 103 liVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~---~yD~Dk~iPvfGFGa~~t~~~~vFsf~~~~p 179 (407)
++|+||-|.||.... + .+|-++.+...+-.++. .-+....+-+..|+...... +.++.
T Consensus 6 tViviD~S~SM~~~D----------~---~PsRl~a~k~Av~~li~~~~~~nPed~VGLVtfag~~~~v--l~plT---- 66 (268)
T 4b4t_W 6 TVLVIDNSEYSRNGD----------F---PRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRV--LSTFT---- 66 (268)
T ss_dssp EEEEECCSSTTSSTT----------S---SSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSCEE--EEEEE----
T ss_pred EEEEEECCHHHhCCC----------C---CCcHHHHHHHHHHHHHHHHhhCCCcceEEEEEecCCccee--ccCCc----
Confidence 789999999995321 1 35777766666555555 44556788899997643211 11221
Q ss_pred ccCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHHhc--CCccEEEEEEeCCccccccccccCCCChhHHHHHHHH
Q 015418 180 FCYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQS--GGQYHVLLIIADGQVTRSVDTVRGCLSPQEQKTVDAI 257 (407)
Q Consensus 180 ~c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive~s--~~~Y~VLLIITDG~Itds~d~~~~~l~~d~~eTidaI 257 (407)
.....++ ..+..++..|-|++..-|+.|...++.. ...-..+||++||.+.+ ++.+.++++
T Consensus 67 --~D~~~il----~aL~~l~~~G~T~l~~gL~~A~~aLk~~~~k~~~~rIIlf~ds~~~~-----------~~~~l~~la 129 (268)
T 4b4t_W 67 --AEFGKIL----AGLHDTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISD-----------SRDELIRLA 129 (268)
T ss_dssp --SCHHHHH----HHHTTCCCCSCCCHHHHHHHHHHHHHTCSCTTSEEEEEEEECSCCSS-----------CHHHHHHHH
T ss_pred --chHHHHH----HHhhhcCcCCCCChHHHHHHHHHHHHhcccCCCceEEEEEECCCCCC-----------CHHHHHHHH
Confidence 2344444 3456778899999999999999988754 23345568889998765 367888899
Q ss_pred HHhcCCCcEEEEEeccCCC--cccccccCCCCCCccccceecccc
Q 015418 258 VKASELPLSIVLVGVGDGP--WDMMKEFDDNIPARAFDNFQFVNF 300 (407)
Q Consensus 258 v~AS~lPLSII~VGVGd~~--F~~M~~LDd~l~~R~rDNvQFV~f 300 (407)
.++.+.-|+|-+||+|.++ -+.|+.|=+...+..-|+.+||..
T Consensus 130 k~lkk~gI~v~vIgFG~~~~n~~kLe~l~~~~Ng~~~~~s~~v~v 174 (268)
T 4b4t_W 130 KTLKKNNVAVDIINFGEIEQNTELLDEFIAAVNNPQEETSHLLTV 174 (268)
T ss_dssp HHHHHHTEEEEEEEESSCCSSCCHHHHHHHHHCSSTTTSCEEEEE
T ss_pred HHHHHcCCEEEEEEeCCCccchHHHHHHHHHhcCCCCCceeEEEe
Confidence 9999999999999999764 455677633233323377777765
No 14
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=97.98 E-value=1.3e-05 Score=81.06 Aligned_cols=154 Identities=16% Similarity=0.176 Sum_probs=99.2
Q ss_pred eeceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhccccc---CCCCccceEeecCCCCCCCCccccCC
Q 015418 100 SSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVF---DEDNLIPCYGFGDASTHDQDVFSFYS 176 (407)
Q Consensus 100 ~~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~y---D~Dk~iPvfGFGa~~t~~~~vFsf~~ 176 (407)
.+++++.||-|+|++. ..+++|.+.+..++..+ ..+-.+-++.|+..... +|.+.
T Consensus 9 ~~divfvlD~SgSM~~------------------~~~~~~k~~~~~l~~~l~~~~~~~rv~lv~f~~~~~~---~~~l~- 66 (509)
T 2odp_A 9 HLNLYLLLDASQSVSE------------------NDFLIFKESASLMVDRIFSFEINVSVAIITFASEPKV---LMSVL- 66 (509)
T ss_dssp EEEEEEEEECSTTSCH------------------HHHHHHHHHHHHHHHHHHTTCCCEEEEEEEESSSEEE---EECTT-
T ss_pred CeeEEEEEeCCCccch------------------hhHHHHHHHHHHHHHHhhccCCCceEEEEEccCCCce---eEecc-
Confidence 4789999999999952 24566666666666555 67888999999875432 33332
Q ss_pred CCCccCCHHHHHHHHHhhCCceee-cCCCChHHHHHHHHHHHHhcC-----------CccEEEEEEeCCccccccccccC
Q 015418 177 GGRFCYGFEEVLSRYREIVPNLKL-AGPTSFAPVIEMAMSIVEQSG-----------GQYHVLLIIADGQVTRSVDTVRG 244 (407)
Q Consensus 177 ~~p~c~G~egVl~aYr~~l~~v~L-sGPT~FAPVI~~ai~ive~s~-----------~~Y~VLLIITDG~Itds~d~~~~ 244 (407)
.+.-...+.++++-.++-..... .|.|+....|+.|.+..+... ..-.++++||||.-++..
T Consensus 67 -~~~~~~~~~~~~~l~~l~~~~~~~~ggT~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~~~~iillTDG~~~~~~----- 140 (509)
T 2odp_A 67 -NDNSRDMTEVISSLENANYKDHENGTGTNTYAALNSVYLMMNNQMRLLGMETMAWQEIRHAIILLTDGKSNMGG----- 140 (509)
T ss_dssp -SGGGGCHHHHHHHHHTCCGGGGTTCCSCCHHHHHHHHHHHHHHHHHHHCTTSHHHHTEEEEEEEESCSCCCSSS-----
T ss_pred -CCCCCCHHHHHHHHHhcccccCCCCCCccHHHHHHHHHHHHhhcccccccccccccccceEEEEECCCCccCCC-----
Confidence 11222455555443332211111 388999999999998764321 123788999999876522
Q ss_pred CCChhHHHHHHHHHHh------cCCCcEEEEEeccC--CCcccccccCC
Q 015418 245 CLSPQEQKTVDAIVKA------SELPLSIVLVGVGD--GPWDMMKEFDD 285 (407)
Q Consensus 245 ~l~~d~~eTidaIv~A------S~lPLSII~VGVGd--~~F~~M~~LDd 285 (407)
+..+..+.+.+. .+..+-|..||||+ .+...|++|-.
T Consensus 141 ----~~~~~~~~~~~~~~~~~~~~~~i~i~~iGvG~~~~~~~~L~~iA~ 185 (509)
T 2odp_A 141 ----SPKTAVDHIREILNINQKRNDYLDIYAIGVGKLDVDWRELNELGS 185 (509)
T ss_dssp ----CTHHHHHHHHHHTTCCSTTGGGEEEEEEEESSSCCCHHHHHHHSC
T ss_pred ----ChhHHHHHHHHHhhccccccCceEEEEEEcCCCcccHHHHHhhcc
Confidence 134555555542 26678899999998 57888887754
No 15
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=97.96 E-value=4.7e-05 Score=68.30 Aligned_cols=132 Identities=17% Similarity=0.263 Sum_probs=86.5
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccC---CCCccceEeecCCCCCCCCccccCCC
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFD---EDNLIPCYGFGDASTHDQDVFSFYSG 177 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD---~Dk~iPvfGFGa~~t~~~~vFsf~~~ 177 (407)
+++++.||-|+|+. .++.+...+-.++..++ ++-.+-++.|+.... .+|+|.
T Consensus 8 ~div~vlD~SgSm~--------------------~~~~~k~~~~~~~~~l~~~~~~~~v~lv~F~~~~~---~~~~l~-- 62 (213)
T 1pt6_A 8 LDIVIVLDGSNSIY--------------------PWDSVTAFLNDLLKRMDIGPKQTQVGIVQYGENVT---HEFNLN-- 62 (213)
T ss_dssp EEEEEEEECCTTCC--------------------CHHHHHHHHHHHHTTSCBSTTSBEEEEEEESSSEE---EEECTT--
T ss_pred ccEEEEEECCCChh--------------------hHHHHHHHHHHHHHhcCCCCCCeEEEEEEeCCCcc---EEEecc--
Confidence 68999999999994 13455555555566554 677899999987542 234442
Q ss_pred CCccCCHHHHHHHHHhhCCcee-ecC-CCChHHHHHHHHHH-HHh----cCCccEEEEEEeCCccccccccccCCCChhH
Q 015418 178 GRFCYGFEEVLSRYREIVPNLK-LAG-PTSFAPVIEMAMSI-VEQ----SGGQYHVLLIIADGQVTRSVDTVRGCLSPQE 250 (407)
Q Consensus 178 ~p~c~G~egVl~aYr~~l~~v~-LsG-PT~FAPVI~~ai~i-ve~----s~~~Y~VLLIITDG~Itds~d~~~~~l~~d~ 250 (407)
+ ....+.++++-. .+. ..| .|+....|+.|.+. ... ....-.++++||||.-++.
T Consensus 63 ~--~~~~~~~~~~i~----~l~~~~G~~T~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~------------ 124 (213)
T 1pt6_A 63 K--YSSTEEVLVAAK----KIVQRGGRQTMTALGTDTARKEAFTEARGARRGVKKVMVIVTDGESHDN------------ 124 (213)
T ss_dssp T--CSSHHHHHHHHH----TCCCCCCSSCCHHHHHHHHHHTTTSGGGTCCTTCEEEEEEEESSCCSCS------------
T ss_pred c--cCCHHHHHHHHH----hccCCCCCcccHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCC------------
Confidence 1 234555555433 233 356 49999999999875 231 1234578899999988762
Q ss_pred HHHHHHHHHhcCCCcEEEEEeccCC
Q 015418 251 QKTVDAIVKASELPLSIVLVGVGDG 275 (407)
Q Consensus 251 ~eTidaIv~AS~lPLSII~VGVGd~ 275 (407)
....+++.++.+..+-|..||||+.
T Consensus 125 ~~~~~~~~~~~~~gi~i~~igig~~ 149 (213)
T 1pt6_A 125 HRLKKVIQDCEDENIQRFSIAILGS 149 (213)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEECHH
T ss_pred ccHHHHHHHHHHCCCEEEEEEeccc
Confidence 2334455555567899999999963
No 16
>2x31_A Magnesium-chelatase 60 kDa subunit; ligase, bacteriochlorophyll biosynthesis, photosynthesis; 7.50A {Rhodobacter capsulatus}
Probab=97.92 E-value=1.2e-06 Score=76.81 Aligned_cols=153 Identities=14% Similarity=0.197 Sum_probs=89.9
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccCCCCccceEeecCCCCCCCCccccCCCCCc
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFSFYSGGRF 180 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD~Dk~iPvfGFGa~~t~~~~vFsf~~~~p~ 180 (407)
.++++.||.|+||.. . ......+++..+..-+ +..+..+-++.|+..... .++.+.
T Consensus 6 ~~vv~vlD~SgSM~~--~-------------~~~~~k~~~~~~~~~~--~~~~~~v~lv~f~~~~~~--~~~~~~----- 61 (189)
T 2x31_A 6 RVLIFAVDASGSAAV--A-------------RLSEAKGAVELLLGRA--YAARDHVSLITFRGTAAQ--VLLQPS----- 61 (189)
T ss_dssp CEEEEEEECCTTSCC-----------------CHHHHHHHHHHHHHS--CTTTSCCCEEEESBSCCC--BCTTTC-----
T ss_pred eEEEEEEECCCCCCc--h-------------HHHHHHHHHHHHHHHh--cCCCcEEEEEEECCCCce--EecCCC-----
Confidence 579999999999941 0 1224444444444322 366778999999863221 122221
Q ss_pred cCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHHhcC--CccEEEEEEeCCccccccccccCCCChh-HHHHHHHH
Q 015418 181 CYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQSG--GQYHVLLIIADGQVTRSVDTVRGCLSPQ-EQKTVDAI 257 (407)
Q Consensus 181 c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive~s~--~~Y~VLLIITDG~Itds~d~~~~~l~~d-~~eTidaI 257 (407)
...+.+.+ .+..+...|.|++...|+.+.+...+.. +.-.++++||||..++..+.... ..+ .++..+++
T Consensus 62 -~~~~~~~~----~i~~l~~~g~T~~~~al~~a~~~l~~~~~~~~~~~ivliTDG~~~~~~~~~~~--~~~~~~~~~~~~ 134 (189)
T 2x31_A 62 -RSLTQTKR----QLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTAN--RELAGEQATKVA 134 (189)
T ss_dssp -SCHHHHHH----HHHHCCCCBCCCCHHHHHHHHHHHHTCTTTCSSEEEEECCBSCCSSCCTHHHH--HGGGTCCCEEEE
T ss_pred -CCHHHHHH----HHhcCCCCCCCCHHHHHHHHHHHHHhccCCCCceEEEEECCCCCCCCCCcccc--ccchhHHHHHHH
Confidence 24444433 3334456799999999999999887642 23578899999987752210000 000 00111222
Q ss_pred HHhcCCCcEEEEEeccCCCcccccccC
Q 015418 258 VKASELPLSIVLVGVGDGPWDMMKEFD 284 (407)
Q Consensus 258 v~AS~lPLSII~VGVGd~~F~~M~~LD 284 (407)
..+.+..+.|+.||+|+.+...|++|-
T Consensus 135 ~~~~~~gi~v~~ig~g~~~~~~L~~iA 161 (189)
T 2x31_A 135 RAIRASGMPAVIIDTAMRPNPALVDLA 161 (189)
T ss_dssp ECTGGGGSCCTHHHHHHSSCSSSCSTT
T ss_pred HHHHHcCCeEEEEecCCCCHHHHHHHH
Confidence 233345678888999988777777664
No 17
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=97.88 E-value=9.7e-05 Score=67.29 Aligned_cols=162 Identities=13% Similarity=0.174 Sum_probs=105.0
Q ss_pred ceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhccccc---CCCCccceEeecCCCCCCCCccccCCCC
Q 015418 102 NLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVF---DEDNLIPCYGFGDASTHDQDVFSFYSGG 178 (407)
Q Consensus 102 nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~y---D~Dk~iPvfGFGa~~t~~~~vFsf~~~~ 178 (407)
.++++||.|.||...+ -.+|-.+.|...+-.++..| .....+-+..|++...+. +.++.
T Consensus 4 ~lvlvlD~S~SM~~~D-------------~~psRl~~ak~~~~~~~~~~~~~~~~d~vGLV~fa~~~a~~--~~plT--- 65 (192)
T 2x5n_A 4 ATMILIDNSEWMINGD-------------YIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQV--LSTLT--- 65 (192)
T ss_dssp EEEEEECCSGGGGCTT-------------SSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSCCE--EEEEE---
T ss_pred EEEEEEECCHhhccCC-------------CCCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEEEcCCCcEE--ecCCC---
Confidence 5899999999996421 13678888877776655544 345689999998753221 12332
Q ss_pred CccCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHHhcC--Ccc-EEEEEEeCCccccccccccCCCChhHHHHHH
Q 015418 179 RFCYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQSG--GQY-HVLLIIADGQVTRSVDTVRGCLSPQEQKTVD 255 (407)
Q Consensus 179 p~c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive~s~--~~Y-~VLLIITDG~Itds~d~~~~~l~~d~~eTid 255 (407)
...+.++ +.+..+...|.|++..-|+.|.+..++.. ... -|+|+++|+. ++ +..+..+
T Consensus 66 ---~d~~~i~----~~L~~l~~~g~t~l~~aL~~A~~~l~~~~~~~~~~riiil~~~~~-~~-----------~~~~~~~ 126 (192)
T 2x5n_A 66 ---RDYGKFL----SAMHDLPVRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPI-VE-----------DEKNLIR 126 (192)
T ss_dssp ---SCHHHHH----HHHTTCCCCSCCCHHHHHHHHHHHHHTCSCTTSEEEEEEEECSCC-SS-----------CHHHHHH
T ss_pred ---CCHHHHH----HHHHcCCCCCCchHHHHHHHHHHHHHhccccCCCceEEEEEECCC-CC-----------CchhHHH
Confidence 1244443 34445777899999999999998887653 223 3445555544 32 2566677
Q ss_pred HHHHhcCCCcEEEEEeccCCCccc-ccccCCCCCCccccceecccchh
Q 015418 256 AIVKASELPLSIVLVGVGDGPWDM-MKEFDDNIPARAFDNFQFVNFTE 302 (407)
Q Consensus 256 aIv~AS~lPLSII~VGVGd~~F~~-M~~LDd~l~~R~rDNvQFV~f~d 302 (407)
++..+.+.-+.|.+||+|..+... |+.|=+... .-||-+||...+
T Consensus 127 ~a~~lk~~gi~v~~Ig~G~~~~~~~l~~la~~~n--~~~~s~~~~~~~ 172 (192)
T 2x5n_A 127 LAKRMKKNNVAIDIIHIGELQNESALQHFIDAAN--SSDSCHLVSIPP 172 (192)
T ss_dssp HHHHHHHTTEEEEEEEESCC---CHHHHHHHHHC--STTCCEEEEECC
T ss_pred HHHHHHHCCCEEEEEEeCCCCccHHHHHHHHhcc--CCCceEEEEecC
Confidence 888888899999999999876532 777643222 127888886544
No 18
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=97.87 E-value=3e-06 Score=74.75 Aligned_cols=143 Identities=17% Similarity=0.220 Sum_probs=90.4
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccC-CCCccceEeecCCCCCCCCccccCCCCC
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFD-EDNLIPCYGFGDASTHDQDVFSFYSGGR 179 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD-~Dk~iPvfGFGa~~t~~~~vFsf~~~~p 179 (407)
+++++.||-|+|++. ..++++...+..++..++ ++-.+-++.|+.... .+|.|+...
T Consensus 6 ~div~vlD~SgSm~~------------------~~~~~~k~~~~~~~~~l~~~~~~v~vv~f~~~~~---~~~~l~~~~- 63 (194)
T 1mf7_A 6 SDIAFLIDGSGSIIP------------------HDFRRMKEFVSTVMEQLKKSKTLFSLMQYSEEFR---IHFTFKEFQ- 63 (194)
T ss_dssp EEEEEEEECCTTSCH------------------HHHHHHHHHHHHHHHHHCCTTEEEEEEEESSSEE---EEECHHHHH-
T ss_pred eeEEEEEeCCCCCCH------------------HHHHHHHHHHHHHHHhcCCCCeEEEEEEecCCce---EEEecCCcC-
Confidence 689999999999952 246666666666777776 345799999987643 234442100
Q ss_pred ccCCHHHHHHHHHhhCCcee-ecCCCChHHHHHHHHHHH-Hh-c---CCccEEEEEEeCCccc-cccccccCCCChhHHH
Q 015418 180 FCYGFEEVLSRYREIVPNLK-LAGPTSFAPVIEMAMSIV-EQ-S---GGQYHVLLIIADGQVT-RSVDTVRGCLSPQEQK 252 (407)
Q Consensus 180 ~c~G~egVl~aYr~~l~~v~-LsGPT~FAPVI~~ai~iv-e~-s---~~~Y~VLLIITDG~It-ds~d~~~~~l~~d~~e 252 (407)
....+ .+.+..+. ..|.|+....|+.+.+.. .. . .+.-.++++||||..+ |..+ ..
T Consensus 64 ~~~~~-------~~~i~~l~~~~g~T~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~d~~~---------~~- 126 (194)
T 1mf7_A 64 NNPNP-------RSLVKPITQLLGRTHTATGIRKVVRELFNITNGARKNAFKILVVITDGEKFGDPLG---------YE- 126 (194)
T ss_dssp HSCCH-------HHHHTTCCCCCSCBCHHHHHHHHHHTTTSGGGTCCTTSEEEEEEEESSCCBSCSSC---------GG-
T ss_pred CHHHH-------HHHHHhCcCCCCCchHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCchh---------hH-
Confidence 00112 22334444 479999999999998643 22 1 1235788999999987 4211 12
Q ss_pred HHHHHHHhcCCCcEEEEEeccCCC-----cccccccC
Q 015418 253 TVDAIVKASELPLSIVLVGVGDGP-----WDMMKEFD 284 (407)
Q Consensus 253 TidaIv~AS~lPLSII~VGVGd~~-----F~~M~~LD 284 (407)
+++.++-+..+-|..||||+.. ...|+++-
T Consensus 127 --~~~~~~~~~gi~v~~igvG~~~~~~~~~~~L~~iA 161 (194)
T 1mf7_A 127 --DVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIA 161 (194)
T ss_dssp --GTHHHHHHTTEEEEEEEESGGGCSHHHHHHHHHHS
T ss_pred --HHHHHHHHCCCEEEEEEecccccccccHHHHHHHh
Confidence 2334445678999999999853 35555553
No 19
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=97.81 E-value=5.7e-05 Score=75.81 Aligned_cols=153 Identities=14% Similarity=0.117 Sum_probs=97.5
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhccc---ccCCCCccceEeecCCCCCCCCccccCCC
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLA---VFDEDNLIPCYGFGDASTHDQDVFSFYSG 177 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~---~yD~Dk~iPvfGFGa~~t~~~~vFsf~~~ 177 (407)
++++++||-|+|++. +.++.|...+..++. .+..+-.+-++.|+..... ++.| .
T Consensus 2 ~div~vlD~SgSM~~------------------~~~~~~k~~~~~~~~~l~~~~~~~~v~lv~f~~~~~~---~~~~--~ 58 (497)
T 1rrk_A 2 MNIYLVLDGSDSIGA------------------SNFTGAKKVLVNLIEKVASYGVKPRYGLVTYATYPKI---WVKV--S 58 (497)
T ss_dssp EEEEEEEECSTTTCH------------------HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESSSEEE---EECT--T
T ss_pred eeEEEEEECCCCcch------------------hhHHHHHHHHHHHHHHhhccCCCceEEEEEecCCceE---eecc--c
Confidence 579999999999952 345555555444444 4555778999999875321 2333 2
Q ss_pred CCccCCHHHHHHHHHhhCCce-eecCCCChHHHHHHHHHHHHhc--------CCccEEEEEEeCCccccccccccCCCCh
Q 015418 178 GRFCYGFEEVLSRYREIVPNL-KLAGPTSFAPVIEMAMSIVEQS--------GGQYHVLLIIADGQVTRSVDTVRGCLSP 248 (407)
Q Consensus 178 ~p~c~G~egVl~aYr~~l~~v-~LsGPT~FAPVI~~ai~ive~s--------~~~Y~VLLIITDG~Itds~d~~~~~l~~ 248 (407)
.+.....+.++++-.++-+.- ...|.|+....|+.|.+..... ...-.++++||||.-++..
T Consensus 59 ~~~~~~~~~~~~~l~~l~~~~~~~~g~T~~~~al~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~--------- 129 (497)
T 1rrk_A 59 EADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGG--------- 129 (497)
T ss_dssp SGGGGCHHHHHHHHHHCCGGGSCCTTCCCHHHHHHHHHHHHCCC------CGGGCEEEEEEEECSCCCSSS---------
T ss_pred cccccCHHHHHHHHHhCcCccccccCccCHHHHHHHHHHHhhhhhccccccccccceEEEEEeCCCcccCC---------
Confidence 233345666665554433221 2568899999999999887321 1234788999999876421
Q ss_pred hHHHHHHHHHHhc----------CCCcEEEEEeccC-CCcccccccCC
Q 015418 249 QEQKTVDAIVKAS----------ELPLSIVLVGVGD-GPWDMMKEFDD 285 (407)
Q Consensus 249 d~~eTidaIv~AS----------~lPLSII~VGVGd-~~F~~M~~LDd 285 (407)
+..+..+.+.+.. +..+-|..||||+ .+...|++|-.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~igvG~~~~~~~L~~iA~ 177 (497)
T 1rrk_A 130 DPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALAS 177 (497)
T ss_dssp CTHHHHHHHHHHTTCSSCC-CCCGGGEEEEEEECSSSCCHHHHHHHSC
T ss_pred ChhHHHHHHHHHhhhhcccccchhcCeeEEEecCCCccCHHHHHHHhc
Confidence 1345556665541 2278899999997 46667777653
No 20
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=97.79 E-value=6.3e-05 Score=79.27 Aligned_cols=157 Identities=15% Similarity=0.111 Sum_probs=95.5
Q ss_pred eeceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccCCCCccceEeecCCCCCCCCccccCCCCC
Q 015418 100 SSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFSFYSGGR 179 (407)
Q Consensus 100 ~~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD~Dk~iPvfGFGa~~t~~~~vFsf~~~~p 179 (407)
.++++++||-|+|++.. ......+++..+..-|..++..-.|-++-|+.... .++.|+. .
T Consensus 243 ~~div~vlD~SgSM~~~---------------~~~~~k~~~~~~i~~l~~~~~~~rv~lv~f~~~~~---~~~~l~~--~ 302 (741)
T 3hrz_D 243 SMNIYLVLDGSGSIGAS---------------DFTGAKKCLVNLIEKVASYGVKPRYGLVTYATYPK---IWVKVSE--A 302 (741)
T ss_dssp EEEEEEEEECSTTTCHH---------------HHHHHHHHHHHHHHHHHHTTCCCEEEEEEESSSEE---EEECTTS--G
T ss_pred ceeEEEEeccCCccccc---------------chHHHHHHHHHHHHhhhccCCCceEEEEEeccCCc---eeEeecc--c
Confidence 37899999999999521 01234444444444444555556799999987542 2334432 1
Q ss_pred ccCCHHHHHHHHHhhCCce-eecCCCChHHHHHHHHHHHHh--c------CCccEEEEEEeCCccccccccccCCCChhH
Q 015418 180 FCYGFEEVLSRYREIVPNL-KLAGPTSFAPVIEMAMSIVEQ--S------GGQYHVLLIIADGQVTRSVDTVRGCLSPQE 250 (407)
Q Consensus 180 ~c~G~egVl~aYr~~l~~v-~LsGPT~FAPVI~~ai~ive~--s------~~~Y~VLLIITDG~Itds~d~~~~~l~~d~ 250 (407)
.-...+.++++-.++-... ...|.|+....|+.|.+.... . ...-.|+|+||||.-+.-. +-
T Consensus 303 ~~~~~~~~~~~i~~l~~~~~~~~ggT~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~n~g~---------~p 373 (741)
T 3hrz_D 303 DSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGG---------DP 373 (741)
T ss_dssp GGGCHHHHHHHHTTCCGGGGSSSCCCCHHHHHHHHHHHHCCC--CCCTTGGGEEEEEEEEECSCCCSSS---------CT
T ss_pred CCcCHHHHHHHHHhcccccccCCCChHHHHHHHHHHHHHhhhhhccccchhccCeEEEEECCCccccCC---------Cc
Confidence 1124455554433321111 168899999999999988721 0 1234788999999765311 13
Q ss_pred HHHHHHHHH----------hcCCCcEEEEEeccC-CCcccccccCC
Q 015418 251 QKTVDAIVK----------ASELPLSIVLVGVGD-GPWDMMKEFDD 285 (407)
Q Consensus 251 ~eTidaIv~----------AS~lPLSII~VGVGd-~~F~~M~~LDd 285 (407)
...++.|.+ +.+..+-|..||||+ .+...|++|-.
T Consensus 374 ~~~~~~i~~~~~~~~~a~~~~~~gi~i~~igvG~~~~~~~L~~ia~ 419 (741)
T 3hrz_D 374 ITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALAS 419 (741)
T ss_dssp HHHHHHHHHHTTCSSCTTCCCGGGEEEEEEECSSSCCHHHHHHHSC
T ss_pred hHHHHHHHHHhhcccccccccccCeeEEEEeCCCcCCHHHHHHHhc
Confidence 455555553 345678999999997 56667776643
No 21
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=97.72 E-value=0.00024 Score=63.08 Aligned_cols=131 Identities=15% Similarity=0.167 Sum_probs=86.9
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccC---CCCccceEeecCCCCCCCCccccCCC
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFD---EDNLIPCYGFGDASTHDQDVFSFYSG 177 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD---~Dk~iPvfGFGa~~t~~~~vFsf~~~ 177 (407)
++++++||-|+|+. .++++...+..++..++ ++-.+-++.|+.... .+|+|+.
T Consensus 7 ~div~vlD~SgSm~--------------------~~~~~k~~~~~~~~~l~~~~~~~rvglv~f~~~~~---~~~~l~~- 62 (200)
T 1v7p_C 7 IDVVVVCDESNSIY--------------------PWDAVKNFLEKFVQGLDIGPTKTQVGLIQYANNPR---VVFNLNT- 62 (200)
T ss_dssp EEEEEEEECCTTCC--------------------CHHHHHHHHHHHHHTSCBSTTSEEEEEEEESSSEE---EEECTTT-
T ss_pred ccEEEEEECCCCcc--------------------cHHHHHHHHHHHHHhcCCCCCceEEEEEEECCCce---EEEeCCC-
Confidence 68999999999984 14556666666666665 577899999987542 2345541
Q ss_pred CCccCCHHHHHHHHHhhCCceee-cC-CCChHHHHHHHHHH-HHhc----CCccEEEEEEeCCccccccccccCCCChhH
Q 015418 178 GRFCYGFEEVLSRYREIVPNLKL-AG-PTSFAPVIEMAMSI-VEQS----GGQYHVLLIIADGQVTRSVDTVRGCLSPQE 250 (407)
Q Consensus 178 ~p~c~G~egVl~aYr~~l~~v~L-sG-PT~FAPVI~~ai~i-ve~s----~~~Y~VLLIITDG~Itds~d~~~~~l~~d~ 250 (407)
....+.++++-.. +.. .| .|+....|+.+.+. .... ...-.++|+||||.-++..
T Consensus 63 ---~~~~~~~~~~i~~----l~~~~G~~T~~~~al~~a~~~~~~~~~g~r~~~~~~ivllTDG~~~~~~----------- 124 (200)
T 1v7p_C 63 ---YKTKEEMIVATSQ----TSQYGGDLTNTFGAIQYARKYAYSAASGGRRSATKVMVVVTDGESHDGS----------- 124 (200)
T ss_dssp ---CSSHHHHHHHHHH----CCCCCCSCCCHHHHHHHHHHHTTSGGGTCCTTSEEEEEEEESSCCSCGG-----------
T ss_pred ---cCCHHHHHHHHHh----hhccCCCCCcHHHHHHHHHHhhcccccCCCCCCCeEEEEEccCCCCCcc-----------
Confidence 2345666554443 332 35 59999999999885 3321 1335788999999987621
Q ss_pred HHHHHHHHHhcCCCcEEEEEeccC
Q 015418 251 QKTVDAIVKASELPLSIVLVGVGD 274 (407)
Q Consensus 251 ~eTidaIv~AS~lPLSII~VGVGd 274 (407)
...+++.++.+..+-|..||||+
T Consensus 125 -~~~~~~~~~~~~gi~i~~igvg~ 147 (200)
T 1v7p_C 125 -MLKAVIDQCNHDNILRFGIAVLG 147 (200)
T ss_dssp -GHHHHHHHHHHTTEEEEEEEECH
T ss_pred -cHHHHHHHHHHCCCEEEEEEecc
Confidence 12234444556789999999963
No 22
>3zqk_A VON willebrand factor; blood clotting, adamts-13, force sensor, VON willebrand DISE domain, haemostasis; HET: NAG; 1.70A {Homo sapiens} PDB: 3ppv_A 3ppx_A 3ppw_A 3ppy_A 3gxb_A*
Probab=97.26 E-value=0.00019 Score=64.07 Aligned_cols=137 Identities=10% Similarity=0.200 Sum_probs=90.8
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccC---CCCccceEeecCCCCCCCCccccCCC
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFD---EDNLIPCYGFGDASTHDQDVFSFYSG 177 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD---~Dk~iPvfGFGa~~t~~~~vFsf~~~ 177 (407)
+++++.||-|.|++. ..++++.+.+-.++..|+ ++-.|-++.|+.... .+|.|+.
T Consensus 22 ~DivfvlD~S~Sm~~------------------~~~~~~k~~~~~~~~~l~~~~~~~rv~vv~fs~~~~---~~~~l~~- 79 (199)
T 3zqk_A 22 LDVAFVLEGSDKIGE------------------ADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVT---VEYPFSE- 79 (199)
T ss_dssp CEEEEEEECCTTTCH------------------HHHHHHHHHHHHHHHHSCBSTTSBEEEEEEESSSEE---EEECTTS-
T ss_pred cCEEEEEECCCCCCH------------------HHHHHHHHHHHHHHHhcCCCCCceEEEEEEECCccc---EEEecCC-
Confidence 689999999999952 246666666667777774 667899999987643 2345531
Q ss_pred CCccCCHHHHHHHHHhhCCcee-ecC-CCChHHHHHHHHHH-HHh-cC---CccEEEEEEeCCccccccccccCCCChhH
Q 015418 178 GRFCYGFEEVLSRYREIVPNLK-LAG-PTSFAPVIEMAMSI-VEQ-SG---GQYHVLLIIADGQVTRSVDTVRGCLSPQE 250 (407)
Q Consensus 178 ~p~c~G~egVl~aYr~~l~~v~-LsG-PT~FAPVI~~ai~i-ve~-s~---~~Y~VLLIITDG~Itds~d~~~~~l~~d~ 250 (407)
....+.++++-.+ ++ ..| -|+....|+.+.+. ... .+ +.-.++++||||...|.+.
T Consensus 80 ---~~~~~~~~~~i~~----l~~~gg~~T~~~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~d~v~---------- 142 (199)
T 3zqk_A 80 ---AQSKGDILQRLRE----IRYQGGNRTNTGLALRYLSDHSFLVSQGDREQAPNLVYMVTGNPASDEIK---------- 142 (199)
T ss_dssp ---CCCHHHHHHHHHH----CCCCCCSCCCHHHHHHHCCCCCTCGGGTCCTTSCEEEEEEECSCCSSCCC----------
T ss_pred ---cCCHHHHHHHHHh----CcCCCCCcChHHHHHHHHHHHhhCcccCCCCCCCeEEEEEeCCCCchHHH----------
Confidence 2245566555443 33 345 39999999888764 221 11 2347899999998766321
Q ss_pred HHHHHHHHHhcCCCcEEEEEecc-CCCcccccccCC
Q 015418 251 QKTVDAIVKASELPLSIVLVGVG-DGPWDMMKEFDD 285 (407)
Q Consensus 251 ~eTidaIv~AS~lPLSII~VGVG-d~~F~~M~~LDd 285 (407)
++ ...+-|.-|||| +.+.+.|+++-.
T Consensus 143 --------~~-~~~v~v~~iGiG~~~~~~~L~~iA~ 169 (199)
T 3zqk_A 143 --------RL-PGDIQVVPIGVGPNANVQELERIGW 169 (199)
T ss_dssp --------CC-CTTEEEEEEEESTTCCHHHHHHHHT
T ss_pred --------HH-hCCCEEEEEEcCCCCCHHHHHHHhC
Confidence 01 256889999999 667778887753
No 23
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=97.18 E-value=0.00059 Score=76.94 Aligned_cols=142 Identities=18% Similarity=0.276 Sum_probs=94.9
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccCCC-CccceEeecCCCCCCCCccccCC--C
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDED-NLIPCYGFGDASTHDQDVFSFYS--G 177 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD~D-k~iPvfGFGa~~t~~~~vFsf~~--~ 177 (407)
+++++.||-|+|++ .+.++++.+.+..++..|+.+ -.|-+..|+.... .+|.|+. +
T Consensus 131 ~DIvfvlD~SgSm~------------------~~~f~~~k~fv~~lv~~~~~~~~rVglV~Fs~~~~---~~~~lt~~~~ 189 (1095)
T 3k6s_A 131 QDIVFLIDGSGSIS------------------SRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQ---THFTFEEFRR 189 (1095)
T ss_dssp EEEEEEEECCTTSC------------------SHHHHHHHHHHHHHHHSSCSSSEEEEEEEESSSEE---EEECSHHHHS
T ss_pred ccEEEEEcCCCCCC------------------hhHHHHHHHHHHHHHHhccccccEEEEEEECCeEE---EEecCcccCC
Confidence 68999999999985 236778888888888888865 5789999987643 2344431 1
Q ss_pred CCccCCHHHHHHHHHhhCCce-eecCCCChHHHHHHHHHHH-Hhc----CCccEEEEEEeCCccc-cccccccCCCChhH
Q 015418 178 GRFCYGFEEVLSRYREIVPNL-KLAGPTSFAPVIEMAMSIV-EQS----GGQYHVLLIIADGQVT-RSVDTVRGCLSPQE 250 (407)
Q Consensus 178 ~p~c~G~egVl~aYr~~l~~v-~LsGPT~FAPVI~~ai~iv-e~s----~~~Y~VLLIITDG~It-ds~d~~~~~l~~d~ 250 (407)
...+ .+++..+ .+.|-|+.+..|+.|.+.+ ... .+.-.|+|+||||..+ |.
T Consensus 190 ~~~l----------~~ai~~i~~~gG~T~~g~AL~~a~~~lf~~~~g~R~~~~kviIllTDG~~~~d~------------ 247 (1095)
T 3k6s_A 190 SSNP----------LSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDS------------ 247 (1095)
T ss_dssp CSCG----------GGGTTTCCCCCSCBCHHHHHHHHHTTTTSTTTTCCSSSEEEEEEEESSCCBSCS------------
T ss_pred HHHH----------HHHHhhhhcccCCChHHHHHHHHHHhhccccccCCCCCCeEEEEEeCCCcCCCc------------
Confidence 1111 2234444 4678999999999997753 221 1234789999999984 32
Q ss_pred HHHHHHHHHhcCCCcEEEEEeccCC-----CcccccccCC
Q 015418 251 QKTVDAIVKASELPLSIVLVGVGDG-----PWDMMKEFDD 285 (407)
Q Consensus 251 ~eTidaIv~AS~lPLSII~VGVGd~-----~F~~M~~LDd 285 (407)
....+++.+|-+.-+-|..||||+. +.+.|+++-+
T Consensus 248 ~~~~~~a~~~r~~GI~i~aIGVG~~~~~~~d~~eL~~IAs 287 (1095)
T 3k6s_A 248 LDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIAS 287 (1095)
T ss_dssp SCHHHHHHHHHHHCEEECCEEBSSGGGSTTSSHHHHTTSC
T ss_pred hhHHHHHHHHHHCCCEEEEEecccccccccCHHHHHHHHc
Confidence 1233444444455788999999986 6666666643
No 24
>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=97.17 E-value=0.001 Score=58.30 Aligned_cols=138 Identities=14% Similarity=0.174 Sum_probs=85.3
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccCCCC-ccceEeecCCCCCCCCccccCCCCC
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDN-LIPCYGFGDASTHDQDVFSFYSGGR 179 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD~Dk-~iPvfGFGa~~t~~~~vFsf~~~~p 179 (407)
+++++.||-|+|++. ..++++...+..++..++.++ .+-+..|+..... +|+|+...
T Consensus 3 ~divfvlD~S~Sm~~------------------~~~~~~k~~~~~~~~~l~~~~~rv~vv~fs~~~~~---~~~l~~~~- 60 (179)
T 1mjn_A 3 VDLVFLFDGSMSLQP------------------DEFQKILDFMKDVMKKCSNTSYQFAAVQFSTSYKT---EFDFSDYV- 60 (179)
T ss_dssp EEEEEEEECBTTCCH------------------HHHHHHHHHHHHHHHHTTTSSEEEEEEEESSSEEE---EECHHHHH-
T ss_pred ccEEEEEeCCCCCCH------------------HHHHHHHHHHHHHHHHhCCCCeEEEEEEECCceeE---EEcCcccC-
Confidence 579999999999852 246666677777777776554 7999999875432 23442100
Q ss_pred ccCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHH-HHhc----CCccEEEEEEeCCccccccccccCCCChhHHHHH
Q 015418 180 FCYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSI-VEQS----GGQYHVLLIIADGQVTRSVDTVRGCLSPQEQKTV 254 (407)
Q Consensus 180 ~c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~i-ve~s----~~~Y~VLLIITDG~Itds~d~~~~~l~~d~~eTi 254 (407)
.-..+..+ .+.++. +.|.|+....|+.|.+. .... .+.-.++++||||.-++.++ .
T Consensus 61 ~~~~~~~~----~~~i~~--~~g~T~~~~aL~~a~~~~~~~~~g~r~~~~~~iillTDG~~~~~~~---------~---- 121 (179)
T 1mjn_A 61 KRKDPDAL----LKHVKH--MLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGN---------I---- 121 (179)
T ss_dssp HHCCHHHH----HTTCCC--CCBCCCHHHHHHHHHHHTSSGGGTCCTTSEEEEEEEESSCCSSCSC---------C----
T ss_pred CHHHHHHH----HHhccc--CCCCChHHHHHHHHHHHhcccccCCCCCCCeEEEEEcCCCCCCCcc---------h----
Confidence 00112222 122333 46889999999999863 3321 22357889999999876321 0
Q ss_pred HHHHHhcCCCcEEEEEeccCCCc-----ccccccC
Q 015418 255 DAIVKASELPLSIVLVGVGDGPW-----DMMKEFD 284 (407)
Q Consensus 255 daIv~AS~lPLSII~VGVGd~~F-----~~M~~LD 284 (407)
+...-+-|..||||+..- ..|+.+-
T Consensus 122 -----~~~~~i~i~~igvG~~~~~~~~~~~L~~iA 151 (179)
T 1mjn_A 122 -----DAAKDIIRYIIGIGKHFQTKESQETLHKFA 151 (179)
T ss_dssp -----GGGTTSEEEEEEESGGGCSHHHHHTTGGGS
T ss_pred -----HHHCCCEEEEEEccccccccccHHHHHHHh
Confidence 013457888899997532 5566553
No 25
>1jey_A KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.1 c.62.1.3 PDB: 1jeq_A* 3rzx_B
Probab=96.82 E-value=0.0081 Score=63.53 Aligned_cols=160 Identities=12% Similarity=0.199 Sum_probs=100.9
Q ss_pred cCcceeceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccc---cCCCCccceEeecCCCCCC----
Q 015418 96 AGLESSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAV---FDEDNLIPCYGFGDASTHD---- 168 (407)
Q Consensus 96 ~Gle~~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~---yD~Dk~iPvfGFGa~~t~~---- 168 (407)
+|-+ .++++||.|.||.... + +...+..+.|++.|..+++. -...-.|-++.||...+.+
T Consensus 33 ~~ke--~ivf~IDvS~SM~~~d---~--------~~~~srl~~a~~~v~~~i~~kii~~~~D~vGlVlfgt~~t~n~l~~ 99 (609)
T 1jey_A 33 SGRD--SLIFLVDASKAMFESQ---S--------EDELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNF 99 (609)
T ss_dssp -CEE--EEEEEEECSGGGGCCC---S--------SSSCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCC
T ss_pred cCce--EEEEEEECCHHHcCCC---C--------CCCCChHHHHHHHHHHHHHHhhCCCCCCeEEEEEEccCCCCCcCCC
Confidence 4545 4999999999996421 0 12468999999998888875 3445689999999876421
Q ss_pred CCccccCC-CCCccCCHHHHHHHHHhhCC---------ceeecCCCChHHHHHHHHHHHHhcCCcc--EEEEEEeCCccc
Q 015418 169 QDVFSFYS-GGRFCYGFEEVLSRYREIVP---------NLKLAGPTSFAPVIEMAMSIVEQSGGQY--HVLLIIADGQVT 236 (407)
Q Consensus 169 ~~vFsf~~-~~p~c~G~egVl~aYr~~l~---------~v~LsGPT~FAPVI~~ai~ive~s~~~Y--~VLLIITDG~It 236 (407)
.+|+-+.+ +.+ +.+ .++..++.+. .+.....|.+.-+|-.|+++.+....++ -++++||||.-.
T Consensus 100 d~i~v~~~L~~~---~~~-~ik~l~~l~~~~~~~~~~~~~g~~~~t~l~daL~~a~~~f~~~~~k~~~k~IiL~TDg~~p 175 (609)
T 1jey_A 100 KNIYVLQELDNP---GAK-RILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNP 175 (609)
T ss_dssp TTEEEEEEEECC---CHH-HHHHHHTTSHHHHHHHHHHHHCCSCCCCHHHHHHHHHHHHHTCSSCEEEEEEEEEESCSCT
T ss_pred CCeEEEecCCCC---CHH-HHHHHHHHhhcccchhhhhhcCCCCCCCHHHHHHHHHHHHHhhchhhcCCEEEEEcCCCCC
Confidence 12222211 111 222 2222222221 0112457999999999999987653332 578999999643
Q ss_pred cccccccCCCChhHHHHHHHHHHhcCCCcEEEEEeccCCC-cc
Q 015418 237 RSVDTVRGCLSPQEQKTVDAIVKASELPLSIVLVGVGDGP-WD 278 (407)
Q Consensus 237 ds~d~~~~~l~~d~~eTidaIv~AS~lPLSII~VGVGd~~-F~ 278 (407)
- +.-+..+.....++.++.++-|.|.+||||..+ |+
T Consensus 176 ~------~~~~~~~~~~~~~a~~l~~~gI~i~~igig~~~~fd 212 (609)
T 1jey_A 176 H------GNDSAKASRARTKAGDLRDTGIFLDLMHLKKPGGFD 212 (609)
T ss_dssp T------TTCHHHHHHHHHHHHHHHHHTEEEEEEEBCCTTCCC
T ss_pred C------CCchHHHHHHHHHHHHHHhcCcEEEEEecCCCCccc
Confidence 1 111112346677788888999999999999753 54
No 26
>1jey_B KU80; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.2 c.62.1.4 PDB: 1jeq_B*
Probab=96.60 E-value=0.0076 Score=63.02 Aligned_cols=150 Identities=16% Similarity=0.217 Sum_probs=96.7
Q ss_pred cCcceeceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhccc---ccCCCCccceEeecCCCCCC----
Q 015418 96 AGLESSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLA---VFDEDNLIPCYGFGDASTHD---- 168 (407)
Q Consensus 96 ~Gle~~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~---~yD~Dk~iPvfGFGa~~t~~---- 168 (407)
+|-. -.++++||.|.||.... .+ ..+..+.|.+.+..+++ .....-.|-++.||...+..
T Consensus 4 ~~~k-e~iv~~iDvS~SM~~~d-----------~~-~~srl~~ak~~i~~~i~~ki~~~~~D~vGlv~f~~~~~~~plt~ 70 (565)
T 1jey_B 4 SGNK-AAVVLCMDVGFTMSNSI-----------PG-IESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTDNPLSG 70 (565)
T ss_dssp --CC-EEEEEEEECCGGGGCCB-----------TT-BCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCT
T ss_pred CCCc-eEEEEEEECChHhcccC-----------CC-CCCcHHHHHHHHHHHHHHHhcCCCCCEEEEEEEccCCCCCcccc
Confidence 4543 26999999999996321 11 36889999999888888 36677899999999875321
Q ss_pred ----CCccccCCCCCccCCHHHHHHHHHhhCCceeec-CCCChHHHHHHHHHHHHhc--CCcc--EEEEEEeCCcccccc
Q 015418 169 ----QDVFSFYSGGRFCYGFEEVLSRYREIVPNLKLA-GPTSFAPVIEMAMSIVEQS--GGQY--HVLLIIADGQVTRSV 239 (407)
Q Consensus 169 ----~~vFsf~~~~p~c~G~egVl~aYr~~l~~v~Ls-GPT~FAPVI~~ai~ive~s--~~~Y--~VLLIITDG~Itds~ 239 (407)
.+|+-+.+-. .... .+++...+ .+..+ +.|.+...|..|+++.++. ..++ -++++||||.-.-.
T Consensus 71 d~~y~~i~vl~~l~--~~~~-~~l~~l~~---~l~~~~~~t~i~~al~~A~~~l~~~~~~~k~~~krIiLlTDg~~~~~- 143 (565)
T 1jey_B 71 GDQYQNITVHRHLM--LPDF-DLLEDIES---KIQPGSQQADFLDALIVSMDVIQHETIGKKFEKRHIEIFTDLSSRFS- 143 (565)
T ss_dssp TTCSTTEEEEEEEE--CCCH-HHHHHHHT---TCCCCSSCCCHHHHHHHHHHHHHHHSSSSCCSEEEEEEECCCCSCCC-
T ss_pred ccCCCceEEeecCC--CCCH-HHHHHHHh---hccCCCccccHHHHHHHHHHHHHHHhhcccccccEEEEEeCCCCCCC-
Confidence 0111111000 0111 33333333 23333 6899999999999988765 3334 57899999975421
Q ss_pred ccccCCCChhHHHHHHHHHHhcCCCcEEE-EEeccCC
Q 015418 240 DTVRGCLSPQEQKTVDAIVKASELPLSIV-LVGVGDG 275 (407)
Q Consensus 240 d~~~~~l~~d~~eTidaIv~AS~lPLSII-~VGVGd~ 275 (407)
.....+++.++.+.-|.|. +||+|..
T Consensus 144 ----------~~~~~~~a~~l~~~gI~i~~vig~g~~ 170 (565)
T 1jey_B 144 ----------KSQLDIIIHSLKKCDISLQFFLPFSLG 170 (565)
T ss_dssp ----------CTTHHHHHHHHHHTTEEEEEEESSCCC
T ss_pred ----------HHHHHHHHHHHHhcCcEEEEEeccCCC
Confidence 1234566777888999999 8999864
No 27
>1yvr_A RO autoantigen, 60-kDa SS-A/RO ribonucleoprotein, 60 kDa; heat repeat, VON willebrand factor A, rossmann fold, midas motif', RNA binding protein; 1.95A {Xenopus laevis} SCOP: a.118.25.1 c.62.1.5 PDB: 1yvp_A 2i91_A
Probab=96.45 E-value=0.025 Score=58.63 Aligned_cols=139 Identities=11% Similarity=0.150 Sum_probs=82.8
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccCCCCccceEeecCCCCCCCCccccCCCCCc
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFSFYSGGRF 180 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD~Dk~iPvfGFGa~~t~~~~vFsf~~~~p~ 180 (407)
.+++|+||.|+||.... . .++ . .+.++.-.++ .+..- .+..+-++.|++... .+.+.++
T Consensus 369 ~~v~lvvD~SgSM~~~~---~-~~~-------l-~~~~~Aa~l~-~~~~~-~~d~vglv~Fs~~~~----~~~~t~~--- 427 (538)
T 1yvr_A 369 KRFLLAIDVSASMNQRV---L-GSI-------L-NASVVAAAMC-MLVAR-TEKDSHMVAFSDEML----PCPITVN--- 427 (538)
T ss_dssp CCEEEEEECSGGGGSBS---T-TSS-------C-BHHHHHHHHH-HHHHH-HCSSEEEEEESSSEE----CCSCCTT---
T ss_pred ceEEEEEECccccCCCC---C-CCc-------H-HHHHHHHHHH-HHHhc-cCCceEEEEECCCce----EcCCCCc---
Confidence 68999999999996421 0 011 1 2233312222 11112 234688999986321 1233222
Q ss_pred cCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHHhcCCccEEEEEEeCCccccccccccCCCChhHHHHHHHHHHh
Q 015418 181 CYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQSGGQYHVLLIIADGQVTRSVDTVRGCLSPQEQKTVDAIVKA 260 (407)
Q Consensus 181 c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive~s~~~Y~VLLIITDG~Itds~d~~~~~l~~d~~eTidaIv~A 260 (407)
.++..+++.-. .+ ..|.|+++..|..+.+. ....-++|+||||..+.. .-+ ..+.++.+.+.
T Consensus 428 -~~l~~~l~~l~----~~-~~GgT~i~~aL~~a~~~----~~~~~~iIliTDg~~~~g------~~~--~~~~l~~~~~~ 489 (538)
T 1yvr_A 428 -MLLHEVVEKMS----DI-TMGSTDCALPMLWAQKT----NTAADIFIVFTDCETNVE------DVH--PATALKQYREK 489 (538)
T ss_dssp -SCHHHHHHHHT----TC-CCSCCCTTHHHHHHHHT----TCCCSEEEEEECCCCCSS------SCC--HHHHHHHHHHH
T ss_pred -ccHHHHHHHHh----cC-CCCCCcHHHHHHHHHhc----cCCCCEEEEEcCCCCCCC------CCC--HHHHHHHHHHH
Confidence 23666554433 22 57889999999888764 233467899999987641 111 24555666766
Q ss_pred cCCCcEEEEEeccCCCcc
Q 015418 261 SELPLSIVLVGVGDGPWD 278 (407)
Q Consensus 261 S~lPLSII~VGVGd~~F~ 278 (407)
.+.++.+++||||.....
T Consensus 490 ~~~~v~l~~igig~~~~~ 507 (538)
T 1yvr_A 490 MGIPAKLIVCAMTSNGFS 507 (538)
T ss_dssp HTCCCEEEEEECSSSSEE
T ss_pred hCCCcEEEEEEecCCCCc
Confidence 678899999999986544
No 28
>2nvo_A RO sixty-related protein, RSR; alpha helical repeats, VON willebrand factor A domain, beta- RNA binding protein; 1.89A {Deinococcus radiodurans}
Probab=95.47 E-value=0.096 Score=54.50 Aligned_cols=140 Identities=14% Similarity=0.159 Sum_probs=83.3
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccCCCCccceEeecCCCCCCCCccccCCCCCc
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFSFYSGGRF 180 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD~Dk~iPvfGFGa~~t~~~~vFsf~~~~p~ 180 (407)
.+++|+||.|+||.+.+ ... ....+..+.| ..++-++.. . +..+-++.|++.... + .+.++
T Consensus 363 ~~~lv~vDvSgSM~~~~-------~~~--~~k~~~~e~A-a~la~~~~r-~-~d~v~lv~Fs~~~~~---~-~~~~~--- 423 (535)
T 2nvo_A 363 TRHLLALDVSGSMTCGD-------VAG--VPGLTPNMAA-AAMSLIALR-T-EPDALTMGFAEQFRP---L-GITPR--- 423 (535)
T ss_dssp SEEEEEECCSGGGGSCC-------GGG--CTTCCHHHHH-HHHHHHHHH-H-SSEEEEEEEBSSEEE---C-CCCTT---
T ss_pred ceEEEEEECCccccCCC-------CCC--CCcccHHHHH-HHHHHHHcC-c-CCceEEEEECCcceE---c-CCCcc---
Confidence 57999999999996411 001 1123444433 344433332 2 226888999874321 1 22222
Q ss_pred cCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHHhcCCccEEEEEEeCCccccccccccCCCChhHHHHHHHHHHh
Q 015418 181 CYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQSGGQYHVLLIIADGQVTRSVDTVRGCLSPQEQKTVDAIVKA 260 (407)
Q Consensus 181 c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive~s~~~Y~VLLIITDG~Itds~d~~~~~l~~d~~eTidaIv~A 260 (407)
.++.++++ .+... ..|.|+++..|+.+.+. ....-+++|||||+... +..++ .+.++...+.
T Consensus 424 -~~l~~~l~---~l~~~--~~ggTdi~~~l~~a~~~----~~~~~~vIliTD~~~~~------g~~~~--~~al~~~r~~ 485 (535)
T 2nvo_A 424 -DTLESAMQ---KAQSV--SFGGTDCAQPILWAAQE----RLDVDTFVVYTDNETWA------GQVHP--TVALDQYAQK 485 (535)
T ss_dssp -CCHHHHHH---HTCCS--SBCCCCTTHHHHHHHHT----TCCCSEEEEEESSCCCC------CSSCH--HHHHHHHHHH
T ss_pred -hhHHHHHH---HHhhC--CCCCccHHHHHHHHHHh----cCCCCEEEEEeCCCccC------CCCCH--HHHHHHHHHh
Confidence 45555543 33221 26889999988776432 33467889999998764 11223 3556666766
Q ss_pred cCCCcEEEEEeccCCCc
Q 015418 261 SELPLSIVLVGVGDGPW 277 (407)
Q Consensus 261 S~lPLSII~VGVGd~~F 277 (407)
.+.++-+++||||....
T Consensus 486 ~~~~~klv~i~l~~~~~ 502 (535)
T 2nvo_A 486 MGRAPKLIVVGLTATEF 502 (535)
T ss_dssp HSCCCEEEEEETTCSCC
T ss_pred hCCCCeEEEEeccCCCc
Confidence 67899999999998643
No 29
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=88.40 E-value=2.1 Score=47.62 Aligned_cols=123 Identities=16% Similarity=0.190 Sum_probs=70.2
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHH---HHHHHHhhcccccCCCCccceEeecCCCCCCC--Cc-cc-
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYE---QAISIIGKTLAVFDEDNLIPCYGFGDASTHDQ--DV-FS- 173 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~Yq---qAI~~Ig~vL~~yD~Dk~iPvfGFGa~~t~~~--~v-Fs- 173 (407)
+.++++||.|+||... .+. .....+ +|+..+...|.. ..+-.|-+..|+....... .| +.
T Consensus 225 ~DIVfVLD~SGSM~~~--------~~~----~~~Rl~~~K~a~~~~ld~L~~-~~~drVgLV~Fs~~a~~~~~~~v~~~~ 291 (893)
T 2ww8_A 225 LDVVILLDNSNSMSNI--------RNK----NARRAERAGEATRSLIDKITS-DSENRVALVTYASTIFDGTEFTVEKGV 291 (893)
T ss_dssp EEEEEEEECCGGGCTT--------HHH----HCCHHHHHHHHHHHHHHHHHT-STTCEEEEEEESSSBCBSCEEEEECCE
T ss_pred ccEEEEEeCCCCCCCc--------Ccc----chhHHHHHHHHHHHHHHHhhc-CCCcEEEEEEecCcccccccccccccc
Confidence 5799999999999631 000 011233 455555444433 3467899999997532100 00 00
Q ss_pred --------------------cC-CCCCcc-----CCHHHHHHHHHhhCCc----------eeecCCCChHHHHHHHHHHH
Q 015418 174 --------------------FY-SGGRFC-----YGFEEVLSRYREIVPN----------LKLAGPTSFAPVIEMAMSIV 217 (407)
Q Consensus 174 --------------------f~-~~~p~c-----~G~egVl~aYr~~l~~----------v~LsGPT~FAPVI~~ai~iv 217 (407)
|. ...+.| ...+++ +.-++.++. +...|-|+...-|+.|+++.
T Consensus 292 ~~~~g~~~n~~~~w~~~~t~~t~~~~~~~~lpLT~d~~~i-~~lk~~I~~~~~~~~G~~~l~~~GGT~i~~AL~~A~~lL 370 (893)
T 2ww8_A 292 ADKNGKRLNDSLFWNYDQTSFTTNTKDYSYLKLTNDKNDI-VELKNKVPTEAEDHDGNRLMYQFGATFTQKALMKADEIL 370 (893)
T ss_dssp ECTTCCEECCCTTSCTTCCEEEEECCBCCEEEEECCHHHH-HHHHHHSCSCCCCSCTTSGGGGGCSCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccCCHHHH-HHHHHHHhhhccccccccccccCCCChHHHHHHHHHHHH
Confidence 00 011122 223333 333455553 34478899999999999998
Q ss_pred Hh-c-CCccEEEEEEeCCcccc
Q 015418 218 EQ-S-GGQYHVLLIIADGQVTR 237 (407)
Q Consensus 218 e~-s-~~~Y~VLLIITDG~Itd 237 (407)
++ . ...=-++|+||||.-+.
T Consensus 371 ~~~~~~~~~kvIILLTDG~pt~ 392 (893)
T 2ww8_A 371 TQQARQNSQKVIFHITDGVPTM 392 (893)
T ss_dssp HHHSCSSSEEEEEEEESSCCSE
T ss_pred HhhcccCCCeEEEEEcCCCCCc
Confidence 74 2 13346789999998765
No 30
>2iue_A Pactolus I-domain; membrane protein, CD, ITC, limbs, midas, admidas, membrane, integrin, titration, rossman fold, cell adhesion, transmembrane; NMR {Mus musculus}
Probab=82.30 E-value=2.1 Score=39.88 Aligned_cols=108 Identities=13% Similarity=0.170 Sum_probs=62.3
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccCCCCccceEeecCCCCCCCCccccCCCCCc
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFSFYSGGRF 180 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD~Dk~iPvfGFGa~~t~~~~vFsf~~~~p~ 180 (407)
+.|.+.||+|.||+. + ....+..+..|..-|+.+..+-.|-+-+|-++. ..++++|..
T Consensus 4 vDl~fl~D~S~SM~~------------d----i~~lk~~~~~l~~~l~~~~~~~r~Gfg~f~Dk~--~~~~l~lT~---- 61 (212)
T 2iue_A 4 VDLYFLMGLSGSAQG------------H----LSNVQTLGSDLLKALNEISRSGRIGFGSIVNMT--FQHILKLTA---- 61 (212)
T ss_dssp EEEEEEEECCGGGTT------------T----HHHHHHHHHHHHHHHHHHCSCEEEEEEEESSSC--EEEEEEEES----
T ss_pred eEEEEEEeCCCcchh------------H----HHHHHHHHHHHHHHHHhhCcCceEEEEEEEcCc--ceecCCcCC----
Confidence 578999999999974 1 246777777777777777666554444444441 122334431
Q ss_pred cCCHHHHHHHHHhhCCceeecC----CC-ChHHHHHHHHH--HHHhcCCccEEEEEEeCCcccc
Q 015418 181 CYGFEEVLSRYREIVPNLKLAG----PT-SFAPVIEMAMS--IVEQSGGQYHVLLIIADGQVTR 237 (407)
Q Consensus 181 c~G~egVl~aYr~~l~~v~LsG----PT-~FAPVI~~ai~--ive~s~~~Y~VLLIITDG~Itd 237 (407)
.++ .+++.+.+...+| |- -|.-+++.++. ...... .-.+||++||+..+.
T Consensus 62 --d~~----~F~~~v~~~~vsg~~D~PE~g~dal~qa~~c~~~i~Wr~-a~rllvl~TDa~~H~ 118 (212)
T 2iue_A 62 --DSS----QFQRELRKQLVSGKLATPKGQLDAVVQVAICLGEIGWRN-GTRFLVLVTDNDFHL 118 (212)
T ss_dssp --CHH----HHHHHHHTCCCCCCSSSSBCHHHHHHHHHHCHHHHTCCS-SEEEEEEECSSCBCC
T ss_pred --CHH----HHHHHHhhccccCCCCCCchHHHHHHHHHHhhhhcccCC-ccEEEEEECcCCccc
Confidence 222 3344444455555 33 33334443321 122334 569999999998765
No 31
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=66.66 E-value=6.8 Score=42.34 Aligned_cols=49 Identities=14% Similarity=0.344 Sum_probs=29.5
Q ss_pred HHHHHhhCCceeecCC----C-ChHHHHHHHH--HHHHhcCCccEEEEEEeCCccc
Q 015418 188 LSRYREIVPNLKLAGP----T-SFAPVIEMAM--SIVEQSGGQYHVLLIIADGQVT 236 (407)
Q Consensus 188 l~aYr~~l~~v~LsGP----T-~FAPVI~~ai--~ive~s~~~Y~VLLIITDG~It 236 (407)
.+.+++.+.++.++|- - -|.-|++.|. +......+-.++||++||...+
T Consensus 200 ~~~f~~~v~~~~isgn~D~PE~g~dAl~qa~~c~~~igWr~~a~rllv~~TDa~~H 255 (690)
T 3fcs_B 200 VTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTH 255 (690)
T ss_dssp HHHHHHHHTTCCCCCCSSSSBCHHHHHHHHHHCHHHHTCCSSSEEEEEEEESSCBC
T ss_pred HHHHHHHhhceeccCCCCCCchHHHHHHHHhhcccccCCCCCceEEEEEECCCccc
Confidence 3456666767766653 2 3444444442 2233344567999999998766
No 32
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=62.78 E-value=9.2 Score=36.39 Aligned_cols=92 Identities=17% Similarity=0.216 Sum_probs=58.2
Q ss_pred eceEEEEEcCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHhhcccccCCCCccceEeecCCCCCCCCcc-ccCCCCC
Q 015418 101 SNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVF-SFYSGGR 179 (407)
Q Consensus 101 ~nliVaIDFT~SN~~~g~~s~~~~SLHyi~~~~N~YqqAI~~Ig~vL~~yD~Dk~iPvfGFGa~~t~~~~vF-sf~~~~p 179 (407)
+.+++.||-|+|+. + .......||..+..-+..+-....|-++.|+........+. .|....
T Consensus 135 ~~vvfLVDtSgSM~--~--------------kl~~vk~al~~Ll~sl~~~~~~~~VavV~F~~~~~~~~~ll~pfT~~~- 197 (242)
T 3rag_A 135 LHLVVCLDTSASMR--D--------------KIPTVREAVRDLALSLKVRSGPLAVSVIAFPGKGEEATRLVQPFSSEV- 197 (242)
T ss_dssp EEEEEEEECSGGGT--T--------------THHHHHHHHHHHHHHHTTSSSCEEEEEEEESCSTTCSCEEEEEEESSC-
T ss_pred CCEEEEEECcccHH--H--------------HHHHHHHHHHHHHHHHhccCCCcEEEEEEECCCCccceeecCCCCChH-
Confidence 67999999999995 1 12345555555544444343567899999998643222222 333221
Q ss_pred ccCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHHh
Q 015418 180 FCYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQ 219 (407)
Q Consensus 180 ~c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive~ 219 (407)
-+ .+.++.+...|-|..++-|+.|.++.++
T Consensus 198 ---~~-------~~~l~~L~agG~Tplg~AL~~A~~~~~~ 227 (242)
T 3rag_A 198 ---NV-------AALEAELVARGGTPTGPAIDHAADLLLS 227 (242)
T ss_dssp ---CH-------HHHHHHCCCCSCCCHHHHHHHHHHHHHH
T ss_pred ---HH-------HHHHhhCCCCCCCcHHHHHHHHHHHHHH
Confidence 22 2234455678999999999999998764
No 33
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=62.05 E-value=5 Score=38.21 Aligned_cols=42 Identities=24% Similarity=0.394 Sum_probs=28.1
Q ss_pred ccEEEEEEeCCccccccccccCCCChhHHHHHHHHHHhcCCCcEEEEEeccCCC
Q 015418 223 QYHVLLIIADGQVTRSVDTVRGCLSPQEQKTVDAIVKASELPLSIVLVGVGDGP 276 (407)
Q Consensus 223 ~Y~VLLIITDG~Itds~d~~~~~l~~d~~eTidaIv~AS~lPLSII~VGVGd~~ 276 (407)
.--++++||||.-+- |. +| .++...|.+.-|-|..||||+.+
T Consensus 9 ~~k~iillTDG~~~~------g~-~p-----~~aa~~a~~~gi~v~tIGig~~~ 50 (242)
T 3rag_A 9 TIRQILVITDGCSNI------GP-DP-----VEAARRAHRHGIVVNVIGIVGRG 50 (242)
T ss_dssp CEEEEEEEESSCCCS------SS-CH-----HHHHHHHHHTTCEEEEEEECCSS
T ss_pred CccEEEEEccCCCCC------CC-CH-----HHHHHHHHHCCCEEEEEEecCCc
Confidence 346789999998542 11 22 23344566778999999998753
No 34
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=38.62 E-value=15 Score=39.78 Aligned_cols=47 Identities=13% Similarity=0.293 Sum_probs=26.1
Q ss_pred HHHHhhCCceeecC----CC-ChHHHHHHHH--HHHHhcCCccEEEEEEeCCccc
Q 015418 189 SRYREIVPNLKLAG----PT-SFAPVIEMAM--SIVEQSGGQYHVLLIIADGQVT 236 (407)
Q Consensus 189 ~aYr~~l~~v~LsG----PT-~FAPVI~~ai--~ive~s~~~Y~VLLIITDG~It 236 (407)
+.+++.+.++.++| |- -|.-||+.|. +...... ..++||++||...+
T Consensus 193 ~~F~~~v~~~~isgn~D~PE~g~dAl~qa~vc~~~igWr~-a~rllV~~TDa~~H 246 (687)
T 3k6s_B 193 NQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRN-VTRLLVFATDDGFH 246 (687)
T ss_dssp HHHHHHHHTSCCCCCSSSSCCHHHHHHHHTTCHHHHCCCS-SCCEEEEECSSCCC
T ss_pred HHHHHHHhhccccCCCCCCchHHHHHHHHhhcccccCCcc-ceEEEEEECCCccc
Confidence 34455555555555 32 3444444442 2333333 57899999998765
No 35
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=30.99 E-value=80 Score=32.60 Aligned_cols=144 Identities=17% Similarity=0.246 Sum_probs=78.2
Q ss_pred cccHHHHHHHHHHcCcceeceEEEEEcCCCCCCC---CCCCCCCCCccccCCC-----CCHHHHHHHHHhhcccccCCCC
Q 015418 83 YKSLDQVTEALARAGLESSNLIVGIDFTKSNEWT---GKRSFNRRSLHYIGDG-----LNPYEQAISIIGKTLAVFDEDN 154 (407)
Q Consensus 83 ys~ld~V~~aL~~~Gle~~nliVaIDFT~SN~~~---g~~s~~~~SLHyi~~~-----~N~YqqAI~~Ig~vL~~yD~Dk 154 (407)
-.-||-|.+|.+++|.+ -.+.+|+|+.+|--+. |+ | .|.+-++. .=.-+++|+-+.+++..|+
T Consensus 228 ~eaL~ll~~Ai~~aGy~-~~i~i~lD~Aasefy~~~~g~--Y---~l~fk~~~~~~~~~~t~~Elid~y~~lle~yp--- 298 (452)
T 3otr_A 228 EEALNLLVEAIKAAGYE-GKIKIAFDAAASEFYKQDEKK--Y---DLDYKCKTKNASKHLTGEKLKEVYEGWLKKYP--- 298 (452)
T ss_dssp HHHHHHHHHHHHHHTCT-TTSEEEEECCGGGGEETTTTE--E---ETTTTCSSCCGGGEECHHHHHHHHHHHHHHSC---
T ss_pred HHHHHHHHHHHHHcCCC-ceEEEccccchHhheeccCCe--E---EeeccCCCCcccccccHHHHHHHHHHHHhhhC---
Confidence 34588999999999999 5999999999985431 11 1 12111110 0135888888888787764
Q ss_pred ccceEeecCCCCCCCCccccCCCCCccCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHHhcCCccEEEEE-Ee-C
Q 015418 155 LIPCYGFGDASTHDQDVFSFYSGGRFCYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQSGGQYHVLLI-IA-D 232 (407)
Q Consensus 155 ~iPvfGFGa~~t~~~~vFsf~~~~p~c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive~s~~~Y~VLLI-IT-D 232 (407)
+.-+-+ +|.++ .+++.-.-.++.-.++++.|-..|.--.+.+.+.++... ..+|+| +. -
T Consensus 299 ---Iv~IED---------Pl~~d-----D~eg~a~Lt~~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a--~n~IlIKvnQI 359 (452)
T 3otr_A 299 ---IISVED---------PFDQD-----DFASFSAFTKDVGEKTQVIGDDILVTNILRIEKALKDKA--CNCLLLKVNQI 359 (452)
T ss_dssp ---EEEEEC---------CSCTT-----CHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTC--CSEEEECHHHH
T ss_pred ---ceEEec---------CCChh-----hHHHHHHHHHhhCCCeEEEeCccccCCHHHHHHHHhcCC--CCEEEeecccc
Confidence 444422 11112 344433333333335777776554222333333344322 223222 22 2
Q ss_pred CccccccccccCCCChhHHHHHHHHHHhcCCCcEEEE
Q 015418 233 GQVTRSVDTVRGCLSPQEQKTVDAIVKASELPLSIVL 269 (407)
Q Consensus 233 G~Itds~d~~~~~l~~d~~eTidaIv~AS~lPLSII~ 269 (407)
|.|+ ++++++.-|-..-+-+++
T Consensus 360 GgIT---------------Ealka~~lA~~~G~~vmv 381 (452)
T 3otr_A 360 GSVT---------------EAIEACLLAQKSGWGVQV 381 (452)
T ss_dssp CCHH---------------HHHHHHHHHHHTTCEEEE
T ss_pred ccHH---------------HHHHHHHHHHHcCCeEEE
Confidence 5554 677777777766665554
No 36
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=28.49 E-value=97 Score=31.85 Aligned_cols=145 Identities=16% Similarity=0.184 Sum_probs=77.2
Q ss_pred cccHHHHHHHHHHcCcceeceEEEEEcCCCCCCCCC-CCCCCCCccccCC-------CCCHHHHHHHHHhhcccccCCCC
Q 015418 83 YKSLDQVTEALARAGLESSNLIVGIDFTKSNEWTGK-RSFNRRSLHYIGD-------GLNPYEQAISIIGKTLAVFDEDN 154 (407)
Q Consensus 83 ys~ld~V~~aL~~~Gle~~nliVaIDFT~SN~~~g~-~s~~~~SLHyi~~-------~~N~YqqAI~~Ig~vL~~yD~Dk 154 (407)
-.-||-|.+|.+++|.+ -.+.+|+|+.+|--+..+ ..| -|.+-++ ..=.-+++|+-+.++++.|+
T Consensus 224 ~eaL~ll~~Ai~~aGy~-~~i~i~lD~Aasefy~~~~g~Y---~l~f~~~~~~~~~~~~~t~~elid~y~~lle~yp--- 296 (441)
T 3qtp_A 224 REALDLLVEAIAKAGYT-GKIEIAMDCAASEFYNEETKKY---DLGKKIPADKKDPSLVKDVDGLIAEYVDYGKHYP--- 296 (441)
T ss_dssp HHHHHHHHHHHHHHTCT-TTCEEEEECCGGGGEETTTTEE---ETTTTSCGGGCCGGGEECHHHHHHHHHHHHHHSC---
T ss_pred HHHHHHHHHHHHHcCCC-ceEEEccchhHHHhhhccCCeE---EeecCCcccccccccccCHHHHHHHHHHHhhhcc---
Confidence 34588899999999999 599999999998644210 001 1211111 00135788888888887765
Q ss_pred ccceEeecCCCCCCCCccccCCCCCccCCHHHHHHHHHhhCCceeecCCCChHHHHHHHHHHHHhcCCccEEEEE-Ee-C
Q 015418 155 LIPCYGFGDASTHDQDVFSFYSGGRFCYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQSGGQYHVLLI-IA-D 232 (407)
Q Consensus 155 ~iPvfGFGa~~t~~~~vFsf~~~~p~c~G~egVl~aYr~~l~~v~LsGPT~FAPVI~~ai~ive~s~~~Y~VLLI-IT-D 232 (407)
++-+-+ +|.++ .+++.-+. ++.+..+++.|-..|.--.+.+.+.++.. -..+|+| +. -
T Consensus 297 ---I~~IED---------Pl~~d-----D~eg~a~L-t~~lg~i~IvGDEl~vTn~~~i~~~Ie~~--a~n~IlIKvnqi 356 (441)
T 3qtp_A 297 ---IASIED---------PFAED-----DWAAWNKF-TVEHGNFQIVGDDLLVTNPARVQMAMDKN--ACNSVLIKVNQI 356 (441)
T ss_dssp ---EEEEES---------CSCTT-----CHHHHHHH-HHHTTTSEEEESTTTTTCHHHHHHHHHHT--CCSEEEECGGGT
T ss_pred ---eeeecC---------CCChH-----HHHHHHHH-HHhcCCceEEeccccccCHHHHHHHHHcC--CCCEEEeccccc
Confidence 333322 12122 24443332 33333577777655422123333333332 1223222 22 2
Q ss_pred CccccccccccCCCChhHHHHHHHHHHhcCCCcEEEE
Q 015418 233 GQVTRSVDTVRGCLSPQEQKTVDAIVKASELPLSIVL 269 (407)
Q Consensus 233 G~Itds~d~~~~~l~~d~~eTidaIv~AS~lPLSII~ 269 (407)
|.|| ++++++.-|-..-+-+++
T Consensus 357 GGIT---------------Ealkaa~lA~~~G~~vmv 378 (441)
T 3qtp_A 357 GTLT---------------ETFKTIKMAQEKGWGVMA 378 (441)
T ss_dssp CCHH---------------HHHHHHHHHHHTTCEEEE
T ss_pred ccHH---------------HHHHHHHHHHHcCCeEEE
Confidence 4554 677777777766666554
No 37
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=23.90 E-value=59 Score=34.05 Aligned_cols=48 Identities=13% Similarity=0.281 Sum_probs=27.7
Q ss_pred HHHHhhCCceeecCC----C-ChHHHHHHHH--HHHHhcCCccEEEEEEeCCcccc
Q 015418 189 SRYREIVPNLKLAGP----T-SFAPVIEMAM--SIVEQSGGQYHVLLIIADGQVTR 237 (407)
Q Consensus 189 ~aYr~~l~~v~LsGP----T-~FAPVI~~ai--~ive~s~~~Y~VLLIITDG~Itd 237 (407)
+.+.+.+.+...+|- - -|.-||..|. +...... .-++||++||...+-
T Consensus 221 ~~F~~~V~~~~iSGnlD~PEggfDAlmQaavC~~~IgWR~-a~rllV~~TDA~fH~ 275 (503)
T 3v4v_B 221 QAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRN-VSRLLVFTSDDTFHT 275 (503)
T ss_dssp HHHHHHHTTCCCCCCSSSSBCHHHHHHHHHHCHHHHTCCS-SEEEEEEEESSCBCC
T ss_pred HHHHHHHhhcCccCCCCCCchHHHHHHHHhhcccccCCCc-ceEEEEEECCCCcCc
Confidence 456666777776653 2 2444555443 2222333 347889999987653
No 38
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=23.88 E-value=66 Score=33.39 Aligned_cols=49 Identities=16% Similarity=0.373 Sum_probs=27.3
Q ss_pred HHHHhhCCceeecC----CCC-hHHHHHHHH--HHHHhcCCccEEEEEEeCCcccc
Q 015418 189 SRYREIVPNLKLAG----PTS-FAPVIEMAM--SIVEQSGGQYHVLLIIADGQVTR 237 (407)
Q Consensus 189 ~aYr~~l~~v~LsG----PT~-FAPVI~~ai--~ive~s~~~Y~VLLIITDG~Itd 237 (407)
+.+++.+.++.++| |-. |.-|+..|. +........-++||++||...+-
T Consensus 201 ~~F~~~V~~~~iSGn~D~PEgg~dAl~qaavC~~~igWR~~a~rllV~~TDa~~H~ 256 (472)
T 3t3p_B 201 TRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHI 256 (472)
T ss_dssp HHHHHHHHHCCCCCCSSSSBCHHHHHHHHHHCHHHHTCCSSSEEEEEEEESSCBCC
T ss_pred HHHHHHHhhccccCCCCCCchHHHHHHHHhcchhhcCCCCCceEEEEEECCCCcCc
Confidence 44555565566655 332 444444442 22233334578999999987653
No 39
>3vi3_B Integrin beta-1; beta propeller fold, rossman fold, beta sandwich, fibronecti receptor, cell adhesion-immune system complex; HET: NAG BMA MAN; 2.90A {Homo sapiens} PDB: 3vi4_B*
Probab=20.83 E-value=1e+02 Score=31.83 Aligned_cols=49 Identities=18% Similarity=0.394 Sum_probs=29.2
Q ss_pred HHHHHhhCCceeecC----CCC-hHHHHHHHH--HHHHhcCCccEEEEEEeCCcccc
Q 015418 188 LSRYREIVPNLKLAG----PTS-FAPVIEMAM--SIVEQSGGQYHVLLIIADGQVTR 237 (407)
Q Consensus 188 l~aYr~~l~~v~LsG----PT~-FAPVI~~ai--~ive~s~~~Y~VLLIITDG~Itd 237 (407)
.+.+++.+.+..++| |-. |.-++..|. +...... .-++||++||...+-
T Consensus 209 ~~~F~~~V~~~~isGn~D~PEgg~DAl~Qaavc~~~igWR~-a~rllV~~TDa~fH~ 264 (454)
T 3vi3_B 209 GEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRN-VTRLLVFSTDAGFHF 264 (454)
T ss_dssp HHHHHHHHTTCCCCCCSSSSBCHHHHHHHHHHCHHHHTCCS-SEEEEEEEESSCBCC
T ss_pred HHHHHHHHhhccccCCCcCCchhHHHHHHHhccccccCCcc-ceEEEEEECCCCcCc
Confidence 456677777777766 332 444444442 1222333 679999999987663
Done!