BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015423
(407 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 228 bits (580), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 215/394 (54%), Gaps = 43/394 (10%)
Query: 10 EGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 69
+GGEL D I+ +M ++ E DAAV+++Q+L H H +VHRD
Sbjct: 119 KGGELFDEIIHRM-----------------KFNEVDAAVIIKQVLSGVTYLHKHNIVHRD 161
Query: 70 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVW 129
+KPEN L +S ++D+ +K DFGLS + KK ++ +G+AYY+APEVL++K + DVW
Sbjct: 162 LKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVW 221
Query: 130 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 189
SIGVI +ILL G PF +T+ I ++V + K F W ++S AKD +K++L D +
Sbjct: 222 SIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQ 281
Query: 190 ARLTAAQALSHPWVREGGDASEIPIDI----SVLNNMRQFVKYSRLKQFALRALASTL-D 244
R++A QAL HPW++E E I++ + + NMR+F +L Q AL +AS L
Sbjct: 282 RRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTS 341
Query: 245 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK---------DLPWKLKESRVLEILQAI 295
EE +L D F ID + +G + +E+ +K DLP ES V IL A
Sbjct: 342 QEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQ--IESEVDAILGAA 399
Query: 296 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 355
D + +G +D+SEFV + L D + ++AF+KFD D +G I+ +EL G
Sbjct: 400 DFDRNGYIDYSEFVTVAMDRKSLLSKD------KLESAFQKFDQDGNGKISVDELASVFG 453
Query: 356 L----KGSIDPLLEEADIDKDGRISLSEFRRLLR 385
L + ++ D + DG + EF ++++
Sbjct: 454 LDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 487
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 204/394 (51%), Gaps = 42/394 (10%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGEL D I+ + +++E DAAV+++Q+L H H +VHRD+
Sbjct: 88 GGELFDEIILR-----------------QKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDL 130
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWS 130
KPEN L +S D+ +K DFGLS + G K ++ +G+AYY+APEVL++K + DVWS
Sbjct: 131 KPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWS 190
Query: 131 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 190
GVI YILLCG PF +T+ I K V + K F W +S+ AK VK +L +P
Sbjct: 191 CGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSK 250
Query: 191 RLTAAQALSHPWVREGGDASEIPID----ISVLNNMRQFVKYSRLKQFALRALASTLDD- 245
R++A +AL+HPW+ + + L NM++F +L Q A+ + S L
Sbjct: 251 RISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTL 310
Query: 246 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK----------ESRVLEILQAI 295
EE +L F +D + +G + +E+ + K + WK E+ V ILQ++
Sbjct: 311 EETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSV 370
Query: 296 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 355
D + +G +++SEFV + L + R AAF++FD D G IT EEL G
Sbjct: 371 DFDRNGYIEYSEFVTVCMDKQLLLSRE------RLLAAFQQFDSDGSGKITNEELGRLFG 424
Query: 356 LKGSID----PLLEEADIDKDGRISLSEFRRLLR 385
+ D +L+E D + DG + EF +++
Sbjct: 425 VTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 458
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 207/403 (51%), Gaps = 47/403 (11%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL D I+ K R++E DAA +++Q+ H H +VH
Sbjct: 102 LYTGGELFDEII-----------------KRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESD 127
RD+KPEN L +S ++D +K DFGLS + K +D +G+AYY+APEVL+ + D
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCD 204
Query: 128 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 187
VWS GVI YILL G PF+ K E I K V K F W +IS+ AKD ++K+L
Sbjct: 205 VWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFH 264
Query: 188 PRARLTAAQALSHPWVR----EGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTL 243
P R+TA Q L HPW++ E S++P S + N+RQF +L Q AL +AS L
Sbjct: 265 PSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKL 324
Query: 244 DD-EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL------------- 289
+E L + F +D + +G + +E+ + + + K +S L
Sbjct: 325 TTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQID 384
Query: 290 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 349
++ +D + G +++SEF+A+ + L + R + AF+ FD D G I+ +E
Sbjct: 385 SLMPLLDMDGSGSIEYSEFIASAIDRTILLSRE------RMERAFKMFDKDGSGKISTKE 438
Query: 350 L-RMHTGLKGSI-----DPLLEEADIDKDGRISLSEFRRLLRT 386
L ++ + SI + ++E+ D +KDG + +EF +L+
Sbjct: 439 LFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQN 481
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 208/394 (52%), Gaps = 38/394 (9%)
Query: 6 TRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGL 65
T EGGEL ++I+ + ++ E DAA +++Q+L H H +
Sbjct: 125 TEFYEGGELFEQIINR-----------------HKFDECDAANIMKQILSGICYLHKHNI 167
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE 125
VHRD+KPEN L ++ ++K DFGLS F K +D +G+AYY+APEVLK+K +
Sbjct: 168 VHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEK 227
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
DVWS GVI YILLCG PF + + I K+V + K F W +IS+ AK+ +K +L
Sbjct: 228 CDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLT 287
Query: 186 KDPRARLTAAQALSHPWVREGG---DASEIPIDISVLNNMRQFVKYSRLKQFALRALAST 242
D R TA +AL+ W+++ + S+ L+NMR+F +L Q A+ + S
Sbjct: 288 YDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSK 347
Query: 243 LDD-EELADLRDQFDAIDVDKNGSISLEEMRQA--LAKDLPWKLKESRVLE-----ILQA 294
L EE +L D F +D + +G + +E+ + + ++ +L E + +E IL+
Sbjct: 348 LTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKE 407
Query: 295 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 354
+D + +G +++SEF++ + L + R + AF FD D+ G IT EEL
Sbjct: 408 VDFDKNGYIEYSEFISVCMDKQILFSEE------RLRRAFNLFDTDKSGKITKEELANLF 461
Query: 355 GL----KGSIDPLLEEADIDKDGRISLSEFRRLL 384
GL + + + +L EAD +KD I EF ++
Sbjct: 462 GLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMM 495
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 251 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 310
LR F+ D DK+G I+ EE+ + E ++L D N D ++DF EFV+
Sbjct: 437 LRRAFNLFDTDKSGKITKEELANLFG---LTSISEKTWNDVLGEADQNKDNMIDFDEFVS 493
Query: 311 ATLHVHQLEEHDS 323
+H++ +H +
Sbjct: 494 M---MHKICDHKT 503
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 202/394 (51%), Gaps = 45/394 (11%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGEL D I+++ R++E DAA ++RQ+L H + +VHRD+
Sbjct: 110 GGELFDEIISR-----------------KRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 152
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWS 130
KPEN L +S +D++++ DFGLS + KK +D +G+AYY+APEVL + DVWS
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 212
Query: 131 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 190
GVI YILL G PF E I K+V + K F W +S SAKD ++K+L P
Sbjct: 213 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 272
Query: 191 RLTAAQALSHPWVREGGDASEIPIDISVLN----NMRQFVKYSRLKQFALRALASTLDDE 246
R++A AL H W+ + +I +D+ L+ N+RQF +L Q AL + S L +
Sbjct: 273 RISARDALDHEWI-QTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQ 331
Query: 247 -ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL----------EILQAI 295
E +L F +D + +G + E+ + + + K +++ +L ++L A+
Sbjct: 332 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 391
Query: 296 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 355
D + +G +++SEFV + L + R + AF FD D G I+ EL G
Sbjct: 392 DFDKNGYIEYSEFVTVAMDRKTLLSRE------RLERAFRMFDSDNSGKISSTELATIFG 445
Query: 356 LKGSID-----PLLEEADIDKDGRISLSEFRRLL 384
+ +D +L E D + DG + EF+++L
Sbjct: 446 V-SDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 202/394 (51%), Gaps = 45/394 (11%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGEL D I+++ R++E DAA ++RQ+L H + +VHRD+
Sbjct: 133 GGELFDEIISR-----------------KRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 175
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWS 130
KPEN L +S +D++++ DFGLS + KK +D +G+AYY+APEVL + DVWS
Sbjct: 176 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 235
Query: 131 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 190
GVI YILL G PF E I K+V + K F W +S SAKD ++K+L P
Sbjct: 236 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 295
Query: 191 RLTAAQALSHPWVREGGDASEIPIDISVLN----NMRQFVKYSRLKQFALRALASTLDDE 246
R++A AL H W++ +I +D+ L+ N+RQF +L Q AL + S L +
Sbjct: 296 RISARDALDHEWIQT-YTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQ 354
Query: 247 -ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL----------EILQAI 295
E +L F +D + +G + E+ + + + K +++ +L ++L A+
Sbjct: 355 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 414
Query: 296 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 355
D + +G +++SEFV + L + R + AF FD D G I+ EL G
Sbjct: 415 DFDKNGYIEYSEFVTVAMDRKTLLSRE------RLERAFRMFDSDNSGKISSTELATIFG 468
Query: 356 LKGSID-----PLLEEADIDKDGRISLSEFRRLL 384
+ +D +L E D + DG + EF+++L
Sbjct: 469 VS-DVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 202/394 (51%), Gaps = 45/394 (11%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGEL D I+++ R++E DAA ++RQ+L H + +VHRD+
Sbjct: 134 GGELFDEIISR-----------------KRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 176
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWS 130
KPEN L +S +D++++ DFGLS + KK +D +G+AYY+APEVL + DVWS
Sbjct: 177 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 236
Query: 131 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 190
GVI YILL G PF E I K+V + K F W +S SAKD ++K+L P
Sbjct: 237 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 296
Query: 191 RLTAAQALSHPWVREGGDASEIPIDISVLN----NMRQFVKYSRLKQFALRALASTLDDE 246
R++A AL H W++ +I +D+ L+ N+RQF +L Q AL + S L +
Sbjct: 297 RISARDALDHEWIQT-YTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQ 355
Query: 247 -ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL----------EILQAI 295
E +L F +D + +G + E+ + + + K +++ +L ++L A+
Sbjct: 356 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 415
Query: 296 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 355
D + +G +++SEFV + L + R + AF FD D G I+ EL G
Sbjct: 416 DFDKNGYIEYSEFVTVAMDRKTLLSRE------RLERAFRMFDSDNSGKISSTELATIFG 469
Query: 356 LKGSID-----PLLEEADIDKDGRISLSEFRRLL 384
+ +D +L E D + DG + EF+++L
Sbjct: 470 VS-DVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 193/394 (48%), Gaps = 45/394 (11%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGEL D I+++ R++E DAA ++RQ+L H + +VHRD+
Sbjct: 110 GGELFDEIISR-----------------KRFSEVDAARIIRQVLSGITYXHKNKIVHRDL 152
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWS 130
KPEN L +S +D++++ DFGLS + KK +D +G+AYY+APEVL + DVWS
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWS 212
Query: 131 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 190
GVI YILL G PF E I K+V + K F W +S SAKD ++K L P
Sbjct: 213 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSX 272
Query: 191 RLTAAQALSHPWVREGGDASEIPIDISVLN----NMRQFVKYSRLKQFALRALASTLDDE 246
R++A AL H W+ + +I +D+ L+ N+RQF +L Q AL S L +
Sbjct: 273 RISARDALDHEWI-QTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYXGSKLTSQ 331
Query: 247 -ELADLRDQFDAIDVDKNGSISLEEMRQAL----------AKDLPWKLKESRVLEILQAI 295
E +L F D + +G + E+ + A L E V ++L A+
Sbjct: 332 DETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAV 391
Query: 296 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 355
D + +G +++SEFV L + R + AF FD D G I+ EL G
Sbjct: 392 DFDKNGYIEYSEFVTVAXDRKTLLSRE------RLERAFRXFDSDNSGKISSTELATIFG 445
Query: 356 LKGSID-----PLLEEADIDKDGRISLSEFRRLL 384
+ +D +L E D + DG + EF++ L
Sbjct: 446 V-SDVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 133/235 (56%), Gaps = 20/235 (8%)
Query: 7 RLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 66
+L GGEL DRI+ K YTE+DA+ ++ Q+L H G+V
Sbjct: 96 QLVSGGELFDRIVEK-----------------GFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 67 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 126
HRD+KPEN L+ S EDS + +DFGLS PG G+ YVAPEVL +K ++
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W IS+SAKDF++ L+
Sbjct: 199 VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLME 258
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA 240
KDP R T QAL HPW+ G A + I SV +++ S+ KQ A A A
Sbjct: 259 KDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ-AFNATA 311
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 133/235 (56%), Gaps = 20/235 (8%)
Query: 7 RLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 66
+L GGEL DRI+ K YTE+DA+ ++ Q+L H G+V
Sbjct: 96 QLVSGGELFDRIVEK-----------------GFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 67 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 126
HRD+KPEN L+ S EDS + +DFGLS PG G+ YVAPEVL +K ++
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W IS+SAKDF++ L+
Sbjct: 199 VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLME 258
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA 240
KDP R T QAL HPW+ G A + I SV +++ S+ KQ A A A
Sbjct: 259 KDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ-AFNATA 311
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 133/235 (56%), Gaps = 20/235 (8%)
Query: 7 RLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 66
+L GGEL DRI+ K YTE+DA+ ++ Q+L H G+V
Sbjct: 96 QLVSGGELFDRIVEKGF-----------------YTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 67 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 126
HRD+KPEN L+ S EDS + +DFGLS PG G+ YVAPEVL +K ++
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W IS+SAKDF++ L+
Sbjct: 199 VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLME 258
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA 240
KDP R T QAL HPW+ G A + I SV +++ S+ KQ A A A
Sbjct: 259 KDPEKRFTCEQALQHPWI-AGDTALDKNIHQSVSEQIKKNFAKSKWKQ-AFNATA 311
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 131/235 (55%), Gaps = 20/235 (8%)
Query: 7 RLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 66
+L GGEL DRI+ K YTEKDA+ ++RQ+L H G+V
Sbjct: 100 QLVSGGELFDRIVEKGF-----------------YTEKDASTLIRQVLDAVYYLHRMGIV 142
Query: 67 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 126
HRD+KPEN L+ S E+S + +DFGLS G G+ YVAPEVL +K ++
Sbjct: 143 HRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKA 202
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W IS+SAKDF++ L+
Sbjct: 203 VDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLME 262
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA 240
KDP R T QA HPW+ G A I SV +R+ S+ +Q A A A
Sbjct: 263 KDPNKRYTCEQAARHPWI-AGDTALNKNIHESVSAQIRKNFAKSKWRQ-AFNATA 315
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 120/205 (58%), Gaps = 20/205 (9%)
Query: 7 RLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 66
+L GGEL DRI+ K YTE+DA+ ++ Q+L H G+V
Sbjct: 96 QLVSGGELFDRIVEK-----------------GFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 67 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 126
HRD+KPEN L+ S EDS + +DFGLS PG G+ YVAPEVL +K ++
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W IS+SAKDF++ L+
Sbjct: 199 VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLME 258
Query: 186 KDPRARLTAAQALSHPWVREGGDAS 210
KDP R T QAL HPW+ GD +
Sbjct: 259 KDPEKRFTCEQALQHPWI--AGDTA 281
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 120/198 (60%), Gaps = 19/198 (9%)
Query: 7 RLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 66
+L GGEL DRIL + + YTEKDA++V++Q+L H +G+V
Sbjct: 86 QLVSGGELFDRILERGV-----------------YTEKDASLVIQQVLSAVKYLHENGIV 128
Query: 67 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 126
HRD+KPEN L+ + +E+S + TDFGLS + G G+ YVAPEVL +K ++
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI-MSTACGTPGYVAPEVLAQKPYSKA 187
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D WSIGVITYILLCG PF+++TE +F+++ +F W IS SAKDF+ LL
Sbjct: 188 VDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLE 247
Query: 186 KDPRARLTAAQALSHPWV 203
KDP R T +ALSHPW+
Sbjct: 248 KDPNERYTCEKALSHPWI 265
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 137/237 (57%), Gaps = 21/237 (8%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL DRI+ K Y+E+DAA V+Q+L A H +G+VH
Sbjct: 129 LVTGGELFDRIVEK-----------------GYYSERDAADAVKQILEAVAYLHENGIVH 171
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPES 126
RD+KPEN L+ + D+ LK DFGLS ++ + + G+ Y APE+L+ + GPE
Sbjct: 172 RDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEV 231
Query: 127 DVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D+WS+G+ITYILLCG PF+D+ D +F+ +L + F W +S +AKD V+KL+V
Sbjct: 232 DMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIV 291
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAST 242
DP+ RLT QAL HPWV G A+ + +D + +++F +LK +AS+
Sbjct: 292 LDPKKRLTTFQALQHPWV-TGKAANFVHMD-TAQKKLQEFNARRKLKAAVKAVVASS 346
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 115/193 (59%), Gaps = 17/193 (8%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGEL D I+ + +++E DAAV+++Q+L H H +VHRD+
Sbjct: 105 GGELFDEIILR-----------------QKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDL 147
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWS 130
KPEN L +S D+ +K DFGLS + G K ++ +G+AYY+APEVL++K + DVWS
Sbjct: 148 KPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWS 207
Query: 131 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 190
GVI YILLCG PF +T+ I K V + K F W +S+ AK VK +L +P
Sbjct: 208 CGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSK 267
Query: 191 RLTAAQALSHPWV 203
R++A +AL+HPW+
Sbjct: 268 RISAEEALNHPWI 280
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 112/198 (56%), Gaps = 17/198 (8%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL D I+ K R++E DAA +++Q+ H H +VH
Sbjct: 102 LYTGGELFDEII-----------------KRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESD 127
RD+KPEN L +S ++D +K DFGLS + K +D +G+AYY+APEVL+ + D
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCD 204
Query: 128 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 187
VWS GVI YILL G PF+ K E I K V K F W +IS+ AKD ++K+L
Sbjct: 205 VWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFH 264
Query: 188 PRARLTAAQALSHPWVRE 205
P R+TA Q L HPW+++
Sbjct: 265 PSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 112/198 (56%), Gaps = 17/198 (8%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL D I+ K R++E DAA +++Q+ H H +VH
Sbjct: 102 LYTGGELFDEII-----------------KRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESD 127
RD+KPEN L +S ++D +K DFGLS + K +D +G+AYY+APEVL+ + D
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCD 204
Query: 128 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 187
VWS GVI YILL G PF+ K E I K V K F W +IS+ AKD ++K+L
Sbjct: 205 VWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFH 264
Query: 188 PRARLTAAQALSHPWVRE 205
P R+TA Q L HPW+++
Sbjct: 265 PSLRITATQCLEHPWIQK 282
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 111/195 (56%), Gaps = 17/195 (8%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
LC GGEL +R++ K + + E DAA +++ +L A CH + H
Sbjct: 104 LCTGGELFERVVHKRV-----------------FRESDAARIMKDVLSAVAYCHKLNVAH 146
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESD 127
RD+KPENFLF + DS LK DFGL+ KPGK + VG+ YYV+P+VL+ GPE D
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECD 206
Query: 128 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 187
WS GV+ Y+LLCG PF T+ + ++ F K W ++S A+ +++LL K
Sbjct: 207 EWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKS 266
Query: 188 PRARLTAAQALSHPW 202
P+ R+T+ QAL H W
Sbjct: 267 PKQRITSLQALEHEW 281
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 111/195 (56%), Gaps = 17/195 (8%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
LC GGEL +R++ K + + E DAA +++ +L A CH + H
Sbjct: 87 LCTGGELFERVVHKRV-----------------FRESDAARIMKDVLSAVAYCHKLNVAH 129
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESD 127
RD+KPENFLF + DS LK DFGL+ KPGK + VG+ YYV+P+VL+ GPE D
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECD 189
Query: 128 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 187
WS GV+ Y+LLCG PF T+ + ++ F K W ++S A+ +++LL K
Sbjct: 190 EWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKS 249
Query: 188 PRARLTAAQALSHPW 202
P+ R+T+ QAL H W
Sbjct: 250 PKQRITSLQALEHEW 264
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 111/194 (57%), Gaps = 17/194 (8%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGEL D I+++ R++E DAA ++RQ+L H + +VHRD+
Sbjct: 116 GGELFDEIISR-----------------KRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 158
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWS 130
KPEN L +S +D++++ DFGLS + KK +D +G+AYY+APEVL + DVWS
Sbjct: 159 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 218
Query: 131 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 190
GVI YILL G PF E I K+V + K F W +S SAKD ++K+L P
Sbjct: 219 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 278
Query: 191 RLTAAQALSHPWVR 204
R++A AL H W++
Sbjct: 279 RISARDALDHEWIQ 292
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 131/237 (55%), Gaps = 19/237 (8%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL + I+A+ Y+E DA+ ++Q+L CHL+G+VH
Sbjct: 84 LVTGGELFEDIVAR-----------------EYYSEADASHCIQQILESVNHCHLNGIVH 126
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRKS-GPE 125
RD+KPEN L S + +++K DFGL+ ++ ++ + G+ Y++PEVL++ G
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKP 186
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D+W+ GVI YILL G PFWD+ + +++++ DF W +++ AKD + K+L
Sbjct: 187 VDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLT 246
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAST 242
+P R+TA++AL HPW+ + + + ++ +++F +LK L + +T
Sbjct: 247 INPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTMLAT 303
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 129/234 (55%), Gaps = 19/234 (8%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL + I+A+ Y+E DA+ ++Q+L CHL+G+VH
Sbjct: 84 LVTGGELFEDIVAR-----------------EYYSEADASHCIQQILESVNHCHLNGIVH 126
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPE 125
RD+KPEN L S + +++K DFGL+ ++ ++ + G+ Y++PEVL++ G
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKP 186
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D+W+ GVI YILL G PFWD+ + +++++ DF W +++ AKD + K+L
Sbjct: 187 VDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLT 246
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRAL 239
+P R+TA++AL HPW+ + + + ++ +++F +LK L +
Sbjct: 247 INPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTM 300
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 25/263 (9%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL + I+A+ Y+E DA+ ++Q+L CH G+VH
Sbjct: 91 LVTGGELFEDIVAR-----------------EYYSEADASHCIQQILEAVLHCHQMGVVH 133
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPE 125
R++KPEN L S + +++K DFGL+ ++ ++ + G+ Y++PEVL++ G
Sbjct: 134 RNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKP 193
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D+W+ GVI YILL G PFWD+ + +++++ DF W +++ AKD + K+L
Sbjct: 194 VDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLT 253
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAST--- 242
+P R+TAA+AL HPW+ + ++ +++F +LK L + +T
Sbjct: 254 INPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVMLATRNF 313
Query: 243 -LDDEELADLRDQFDAIDVDKNG 264
+ +E+ + +Q I+ NG
Sbjct: 314 SVRKQEIIKVTEQL--IEAISNG 334
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 123/227 (54%), Gaps = 19/227 (8%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL + I+A+ Y+E DA+ ++Q+L CH G+VH
Sbjct: 102 LVTGGELFEDIVAR-----------------EYYSEADASHCIQQILEAVLHCHQMGVVH 144
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPE 125
RD+KPEN L S + +++K DFGL+ ++ ++ + G+ Y++PEVL++ G
Sbjct: 145 RDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKP 204
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D+W+ GVI YILL G PFWD+ + +++++ DF W +++ AKD + K+L
Sbjct: 205 VDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLT 264
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLK 232
+P R+TAA+AL HPW+ + ++ +++F +LK
Sbjct: 265 INPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 311
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 125/227 (55%), Gaps = 19/227 (8%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL + I+A+ Y+E DA+ ++Q+L CH G+VH
Sbjct: 84 LVTGGELFEDIVAR-----------------EYYSEADASHCIQQILEAVLHCHQMGVVH 126
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRKS-GPE 125
RD+KPEN L S + +++K DFGL+ ++ ++ + G+ Y++PEVL++++ G
Sbjct: 127 RDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKP 186
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D+W+ GVI YILL G PFWD+ + +++++ DF W +++ AK+ + ++L
Sbjct: 187 VDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLT 246
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLK 232
+P R+TA +AL HPWV + + + + +++F +LK
Sbjct: 247 INPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 123/234 (52%), Gaps = 19/234 (8%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL + I+A+ Y+E DA+ + Q+L H H +VH
Sbjct: 111 LVTGGELFEDIVAR-----------------EYYSEADASHCIHQILESVNHIHQHDIVH 153
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPE 125
RD+KPEN L S + +++K DFGL+ ++ ++ + G+ Y++PEVL++ G
Sbjct: 154 RDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKP 213
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D+W+ GVI YILL G PFWD+ + +++++ DF W +++ AK+ + ++L
Sbjct: 214 VDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLT 273
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRAL 239
+P R+TA QAL HPWV + + + + +R+F +LK L +
Sbjct: 274 INPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTM 327
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 110/198 (55%), Gaps = 20/198 (10%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL + I+A+ Y+E DA+ ++Q+L A CH +G+VH
Sbjct: 109 LVTGGELFEDIVAREF-----------------YSEADASHCIQQILESIAYCHSNGIVH 151
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPE 125
R++KPEN L S + +++K DFGL+ + + + G+ Y++PEVLK+ S P
Sbjct: 152 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP- 210
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D+W+ GVI YILL G PFWD+ + ++ ++ D+ W +++ AK + +L
Sbjct: 211 VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 270
Query: 186 KDPRARLTAAQALSHPWV 203
+P+ R+TA QAL PW+
Sbjct: 271 VNPKKRITADQALKVPWI 288
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 110/198 (55%), Gaps = 20/198 (10%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL + I+A+ Y+E DA+ ++Q+L A CH +G+VH
Sbjct: 86 LVTGGELFEDIVAREF-----------------YSEADASHCIQQILESIAYCHSNGIVH 128
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPE 125
R++KPEN L S + +++K DFGL+ + + + G+ Y++PEVLK+ S P
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP- 187
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D+W+ GVI YILL G PFWD+ + ++ ++ D+ W +++ AK + +L
Sbjct: 188 VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 247
Query: 186 KDPRARLTAAQALSHPWV 203
+P+ R+TA QAL PW+
Sbjct: 248 VNPKKRITADQALKVPWI 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 110/198 (55%), Gaps = 20/198 (10%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL + I+A+ Y+E DA+ ++Q+L A CH +G+VH
Sbjct: 86 LVTGGELFEDIVAREF-----------------YSEADASHCIQQILESIAYCHSNGIVH 128
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPE 125
R++KPEN L S + +++K DFGL+ + + + G+ Y++PEVLK+ S P
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP- 187
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D+W+ GVI YILL G PFWD+ + ++ ++ D+ W +++ AK + +L
Sbjct: 188 VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 247
Query: 186 KDPRARLTAAQALSHPWV 203
+P+ R+TA QAL PW+
Sbjct: 248 VNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 110/198 (55%), Gaps = 20/198 (10%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL + I+A+ Y+E DA+ ++Q+L A CH +G+VH
Sbjct: 85 LVTGGELFEDIVAREF-----------------YSEADASHCIQQILESIAYCHSNGIVH 127
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPE 125
R++KPEN L S + +++K DFGL+ + + + G+ Y++PEVLK+ S P
Sbjct: 128 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP- 186
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
D+W+ GVI YILL G PFWD+ + ++ ++ D+ W +++ AK + +L
Sbjct: 187 VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 246
Query: 186 KDPRARLTAAQALSHPWV 203
+P+ R+TA QAL PW+
Sbjct: 247 VNPKKRITADQALKVPWI 264
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 110/225 (48%), Gaps = 29/225 (12%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L EGGEL RI R D +TE++AA ++R + H
Sbjct: 101 LLIIMECMEGGELFSRIQE---------------RGDQAFTEREAAEIMRDIGTAIQFLH 145
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
H + HRD+KPEN L+ S ++D+ LK TDFG + Q + YYVAPEVL
Sbjct: 146 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT-QNALQTPCYTPYYVAPEVL--- 201
Query: 122 SGPE-----SDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRNKPDFRRKPWPSI 172
GPE D+WS+GVI YILLCG PF+ T G+ + + + F W +
Sbjct: 202 -GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEV 260
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 217
S AK ++ LL DP RLT Q ++HPW+ + + P+ +
Sbjct: 261 SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 305
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 109/222 (49%), Gaps = 29/222 (13%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L EGGEL RI R D +TE++AA ++R + H
Sbjct: 82 LLIIMECMEGGELFSRIQE---------------RGDQAFTEREAAEIMRDIGTAIQFLH 126
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
H + HRD+KPEN L+ S ++D+ LK TDFG + Q + YYVAPEVL
Sbjct: 127 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT-QNALQTPCYTPYYVAPEVL--- 182
Query: 122 SGPE-----SDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRNKPDFRRKPWPSI 172
GPE D+WS+GVI YILLCG PF+ T G+ + + + F W +
Sbjct: 183 -GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEV 241
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
S AK ++ LL DP RLT Q ++HPW+ + + P+
Sbjct: 242 SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 283
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 14/198 (7%)
Query: 9 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 68
CEGGELL+RI++ A + +E A +++QM+ A H +VH+
Sbjct: 102 CEGGELLERIVS-------------AQARGKALSEGYVAELMKQMMNALAYFHSQHVVHK 148
Query: 69 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDV 128
D+KPEN LF+ S +K DFGL++ K + + G+A Y+APEV KR + D+
Sbjct: 149 DLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDI 208
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 188
WS GV+ Y LL G PF + + + ++ +P++ + P ++ A D +K++L KDP
Sbjct: 209 WSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLLKQMLTKDP 267
Query: 189 RARLTAAQALSHPWVREG 206
R +AAQ L H W ++
Sbjct: 268 ERRPSAAQVLHHEWFKQA 285
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 121/209 (57%), Gaps = 15/209 (7%)
Query: 41 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL------S 94
Y+E A+ +RQ+L CH + ++HRD+KPEN L S + + +K DFG+ S
Sbjct: 127 YSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES 186
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
+ G+ VG+ +++APEV+KR+ G DVW GVI +ILL G PF+ T++ +
Sbjct: 187 GLVAGGR-----VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERL 240
Query: 154 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 213
F+ +++ K + W IS SAKD V+++L+ DP R+T +AL+HPW++E D
Sbjct: 241 FEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE-RDRYAYK 299
Query: 214 IDI-SVLNNMRQFVKYSRLKQFALRALAS 241
I + + +R+F +LK L A++S
Sbjct: 300 IHLPETVEQLRKFNARRKLKGAVLAAVSS 328
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 22/203 (10%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L EGGEL D+++ + R E + QML H +G++H
Sbjct: 95 LMEGGELFDKVVG-----------------NKRLKEATCKLYFYQMLLAVQYLHENGIIH 137
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSG 123
RD+KPEN L S +ED +K TDFG S + + + G+ Y+APEVL
Sbjct: 138 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN 197
Query: 124 PESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 182
D WS+GVI +I L G PF + +T+ + ++ K +F + W +S A D VKK
Sbjct: 198 RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 257
Query: 183 LLVKDPRARLTAAQALSHPWVRE 205
LLV DP+AR T +AL HPW+++
Sbjct: 258 LLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 22/203 (10%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L EGGEL D+++ + R E + QML H +G++H
Sbjct: 95 LMEGGELFDKVVG-----------------NKRLKEATCKLYFYQMLLAVQYLHENGIIH 137
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSG 123
RD+KPEN L S +ED +K TDFG S + + + G+ Y+APEVL
Sbjct: 138 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN 197
Query: 124 PESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 182
D WS+GVI +I L G PF + +T+ + ++ K +F + W +S A D VKK
Sbjct: 198 RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 257
Query: 183 LLVKDPRARLTAAQALSHPWVRE 205
LLV DP+AR T +AL HPW+++
Sbjct: 258 LLVVDPKARFTTEEALRHPWLQD 280
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 111/199 (55%), Gaps = 19/199 (9%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL D FLA K+S TE +A ++Q+L H + H
Sbjct: 89 LVSGGELFD---------------FLA-EKES-LTEDEATQFLKQILDGVHYLHSKRIAH 131
Query: 68 RDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 125
D+KPEN L + +K DFG++ I+ G +F++I G+ +VAPE++ + G E
Sbjct: 132 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE 191
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
+D+WSIGVITYILL G PF +T+ + DF + + + S AKDF+++LLV
Sbjct: 192 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLV 251
Query: 186 KDPRARLTAAQALSHPWVR 204
KDP+ R+T AQ+L H W++
Sbjct: 252 KDPKRRMTIAQSLEHSWIK 270
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 22/203 (10%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L EGGEL D+++ + R E + QML H +G++H
Sbjct: 94 LMEGGELFDKVVG-----------------NKRLKEATCKLYFYQMLLAVQYLHENGIIH 136
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSG 123
RD+KPEN L S +ED +K TDFG S + + + G+ Y+APEVL
Sbjct: 137 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN 196
Query: 124 PESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 182
D WS+GVI +I L G PF + +T+ + ++ K +F + W +S A D VKK
Sbjct: 197 RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 256
Query: 183 LLVKDPRARLTAAQALSHPWVRE 205
LLV DP+AR T +AL HPW+++
Sbjct: 257 LLVVDPKARFTTEEALRHPWLQD 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 22/203 (10%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L EGGEL D+++ + R E + QML H +G++H
Sbjct: 95 LMEGGELFDKVVG-----------------NKRLKEATCKLYFYQMLLAVQYLHENGIIH 137
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSG 123
RD+KPEN L S +ED +K TDFG S + + + G+ Y+APEVL
Sbjct: 138 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN 197
Query: 124 PESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 182
D WS+GVI +I L G PF + +T+ + ++ K +F + W +S A D VKK
Sbjct: 198 RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 257
Query: 183 LLVKDPRARLTAAQALSHPWVRE 205
LLV DP+AR T +AL HPW+++
Sbjct: 258 LLVVDPKARFTTEEALRHPWLQD 280
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 22/203 (10%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L EGGEL D+++ + R E + QML H +G++H
Sbjct: 101 LMEGGELFDKVVG-----------------NKRLKEATCKLYFYQMLLAVQYLHENGIIH 143
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSG 123
RD+KPEN L S +ED +K TDFG S + + + G+ Y+APEVL
Sbjct: 144 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN 203
Query: 124 PESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 182
D WS+GVI +I L G PF + +T+ + ++ K +F + W +S A D VKK
Sbjct: 204 RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 263
Query: 183 LLVKDPRARLTAAQALSHPWVRE 205
LLV DP+AR T +AL HPW+++
Sbjct: 264 LLVVDPKARFTTEEALRHPWLQD 286
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 22/203 (10%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L EGGEL D+++ + R E + QML H +G++H
Sbjct: 234 LMEGGELFDKVVG-----------------NKRLKEATCKLYFYQMLLAVQYLHENGIIH 276
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSG 123
RD+KPEN L S +ED +K TDFG S + + + G+ Y+APEVL
Sbjct: 277 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN 336
Query: 124 PESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 182
D WS+GVI +I L G PF + +T+ + ++ K +F + W +S A D VKK
Sbjct: 337 RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 396
Query: 183 LLVKDPRARLTAAQALSHPWVRE 205
LLV DP+AR T +AL HPW+++
Sbjct: 397 LLVVDPKARFTTEEALRHPWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 22/203 (10%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L EGGEL D+++ + R E + QML H +G++H
Sbjct: 220 LMEGGELFDKVVG-----------------NKRLKEATCKLYFYQMLLAVQYLHENGIIH 262
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSG 123
RD+KPEN L S +ED +K TDFG S + + + G+ Y+APEVL
Sbjct: 263 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN 322
Query: 124 PESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKK 182
D WS+GVI +I L G PF + +T+ + ++ K +F + W +S A D VKK
Sbjct: 323 RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 382
Query: 183 LLVKDPRARLTAAQALSHPWVRE 205
LLV DP+AR T +AL HPW+++
Sbjct: 383 LLVVDPKARFTTEEALRHPWLQD 405
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 127/241 (52%), Gaps = 22/241 (9%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL D FLA +K+S +E++A ++Q+L H + H
Sbjct: 96 LVSGGELFD---------------FLA-QKES-LSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 68 RDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 125
D+KPEN L +K DFGL+ I+ G +F++I G+ +VAPE++ + G E
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
+D+WSIGVITYILL G PF T+ + DF + + S AKDF++KLLV
Sbjct: 199 ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLV 258
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLN--NMR-QFVKYSRLKQFALRALAST 242
K+ R RLT +AL HPW+ + + SV+N N R Q+V+ F++ +L +
Sbjct: 259 KETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRSKLAFSIVSLCNH 318
Query: 243 L 243
L
Sbjct: 319 L 319
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 127/241 (52%), Gaps = 22/241 (9%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL D FLA +K+S +E++A ++Q+L H + H
Sbjct: 96 LVSGGELFD---------------FLA-QKES-LSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 68 RDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 125
D+KPEN L +K DFGL+ I+ G +F++I G+ +VAPE++ + G E
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
+D+WSIGVITYILL G PF T+ + DF + + S AKDF++KLLV
Sbjct: 199 ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLV 258
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLN--NMR-QFVKYSRLKQFALRALAST 242
K+ R RLT +AL HPW+ + + SV+N N R Q+V+ F++ +L +
Sbjct: 259 KETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRSKLAFSIVSLCNH 318
Query: 243 L 243
L
Sbjct: 319 L 319
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 113/209 (54%), Gaps = 31/209 (14%)
Query: 1 MILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 60
M+L + C GGEL D I+++ R +E++ VV RQ++ A
Sbjct: 85 MVLEY---CPGGELFDYIISQ-----------------DRLSEEETRVVFRQIVSAVAYV 124
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVL 118
H G HRD+KPEN LF E LK DFGL K K + Q GS Y APE++
Sbjct: 125 HSQGYAHRDLKPENLLFD---EYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI 181
Query: 119 KRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 176
+ KS G E+DVWS+G++ Y+L+CG PF D ++K+++R K D + W +S S+
Sbjct: 182 QGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK--W--LSPSS 237
Query: 177 KDFVKKLLVKDPRARLTAAQALSHPWVRE 205
++++L DP+ R++ L+HPW+ +
Sbjct: 238 ILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 19/199 (9%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL D FLA K+S TE +A ++Q+L H + H
Sbjct: 96 LVSGGELFD---------------FLA-EKES-LTEDEATQFLKQILDGVHYLHSKRIAH 138
Query: 68 RDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 125
D+KPEN L + +K DFG++ I+ G +F++I G+ +VAPE++ + G E
Sbjct: 139 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
+D+WSIGVITYILL G PF +T+ + DF + + + S AKDF+++LLV
Sbjct: 199 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLV 258
Query: 186 KDPRARLTAAQALSHPWVR 204
KDP+ R+ AQ+L H W++
Sbjct: 259 KDPKRRMXIAQSLEHSWIK 277
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 19/199 (9%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL D FLA K+S TE +A ++Q+L H + H
Sbjct: 110 LVSGGELFD---------------FLA-EKES-LTEDEATQFLKQILDGVHYLHSKRIAH 152
Query: 68 RDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 125
D+KPEN L + +K DFG++ I+ G +F++I G+ +VAPE++ + G E
Sbjct: 153 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE 212
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
+D+WSIGVITYILL G PF +T+ + DF + + + S AKDF+++LLV
Sbjct: 213 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLV 272
Query: 186 KDPRARLTAAQALSHPWVR 204
KDP+ R+ AQ+L H W++
Sbjct: 273 KDPKRRMXIAQSLEHSWIK 291
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 127/241 (52%), Gaps = 22/241 (9%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL D FLA +K+S +E++A ++Q+L H + H
Sbjct: 96 LVSGGELFD---------------FLA-QKES-LSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 68 RDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 125
D+KPEN L +K DFGL+ I+ G +F++I G+ +VAPE++ + G E
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
+D+WSIGVITYILL G PF T+ + DF + + S AKDF++KLLV
Sbjct: 199 ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLV 258
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLN--NMR-QFVKYSRLKQFALRALAST 242
K+ R RLT +AL HPW+ + + SV+N N R Q+V+ F++ +L +
Sbjct: 259 KETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRWKLSFSIVSLCNH 318
Query: 243 L 243
L
Sbjct: 319 L 319
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 122/230 (53%), Gaps = 25/230 (10%)
Query: 1 MILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 60
+IL F GGEL DRI A+ D + +E + +RQ
Sbjct: 125 LILEF---LSGGELFDRIAAE----------------DYKMSEAEVINYMRQACEGLKHM 165
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
H H +VH D+KPEN + ++ K+ SS+K DFGL+ + P + + +A + APE++ R
Sbjct: 166 HEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR 224
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G +D+W+IGV+ Y+LL G PF + + + V R +F + S+S AKDF
Sbjct: 225 EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDF 284
Query: 180 VKKLLVKDPRARLTAAQALSHPWVREGGDASEIP--IDISVLNNMRQFVK 227
+K LL K+PR RLT AL HPW++ GD S + I S N +RQ +K
Sbjct: 285 IKNLLQKEPRKRLTVHDALEHPWLK--GDHSNLTSRIPSSRYNKIRQKIK 332
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 127/241 (52%), Gaps = 22/241 (9%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL D FLA +K+S +E++A ++Q+L H + H
Sbjct: 96 LVSGGELFD---------------FLA-QKES-LSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 68 RDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 125
D+KPEN L +K DFGL+ I+ G +F++I G+ +VAPE++ + G E
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
+D+WSIGVITYILL G PF T+ + DF + + S AKDF++KLLV
Sbjct: 199 ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLV 258
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLN--NMR-QFVKYSRLKQFALRALAST 242
K+ R RLT +AL HPW+ + + SV+N N R Q+V+ F++ +L +
Sbjct: 259 KETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRWKLDFSIVSLCNH 318
Query: 243 L 243
L
Sbjct: 319 L 319
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 98/168 (58%), Gaps = 10/168 (5%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
+EK+ ++R +L + H + +VHRD+KPEN L ++ ++ +DFG S ++PG+
Sbjct: 198 SEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD---DNMQIRLSDFGFSCHLEPGE 254
Query: 102 KFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 154
K +++ G+ Y+APE+LK G E D+W+ GVI + LL G PFW + + +
Sbjct: 255 KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML 314
Query: 155 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 202
+ ++ + F W S++ KD + +LL DP ARLTA QAL HP+
Sbjct: 315 RMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPF 362
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 107/208 (51%), Gaps = 29/208 (13%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I K + E +A+VVV+ + H G+ HRD+KPEN L + + S +K DFGL
Sbjct: 102 IHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLG 161
Query: 95 DFIKPGKKFQDI--------VGSAYYVAPEVLKRKSGPES------DVWSIGVITYILLC 140
IK I GSA Y+APEV++ S S D+WS+GVI YILL
Sbjct: 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
Query: 141 GRRPF---------WDKTE------DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
G PF WD+ E + +F+ + K +F K W IS +AKD + KLLV
Sbjct: 222 GYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLV 281
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIP 213
+D + RL+AAQ L HPWV+ + +P
Sbjct: 282 RDAKQRLSAAQVLQHPWVQGCAPENTLP 309
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 120/230 (52%), Gaps = 20/230 (8%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
++ L GGEL D FLA K+S TE++A ++Q+L H
Sbjct: 89 VILILELVAGGELFD---------------FLA-EKES-LTEEEATEFLKQILNGVYYLH 131
Query: 62 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
+ H D+KPEN L +K DFGL+ I G +F++I G+ +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G E+D+WSIGVITYILL G PF T+ V +F + + + S AKDF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 180 VKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYS 229
+++LLVKDP+ R+T +L HPW++ + S + NM +F K++
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAV-NMEKFKKFA 300
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 108/198 (54%), Gaps = 19/198 (9%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL D FLA +K+S +E++A ++Q+L H + H
Sbjct: 96 LVSGGELFD---------------FLA-QKES-LSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 68 RDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 125
D+KPEN L +K DFGL+ I+ G +F++I G+ +VAPE++ + G E
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
+D+WSIGVITYILL G PF T+ + DF + + S AKDF++KLLV
Sbjct: 199 ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLV 258
Query: 186 KDPRARLTAAQALSHPWV 203
K+ R RLT +AL HPW+
Sbjct: 259 KETRKRLTIQEALRHPWI 276
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 97/171 (56%), Gaps = 10/171 (5%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
+EK+ ++R +L V H +VHRD+KPEN L +D ++K TDFG S + PG+
Sbjct: 109 SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGE 165
Query: 102 KFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 154
K +++ G+ Y+APE+++ G E D+WS GVI Y LL G PFW + + +
Sbjct: 166 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 225
Query: 155 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+ ++ F W S++ KD V + LV P+ R TA +AL+HP+ ++
Sbjct: 226 RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 97/171 (56%), Gaps = 10/171 (5%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
+EK+ ++R +L V H +VHRD+KPEN L +D ++K TDFG S + PG+
Sbjct: 122 SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGE 178
Query: 102 KFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 154
K +++ G+ Y+APE+++ G E D+WS GVI Y LL G PFW + + +
Sbjct: 179 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 155 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+ ++ F W S++ KD V + LV P+ R TA +AL+HP+ ++
Sbjct: 239 RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 108/198 (54%), Gaps = 19/198 (9%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL D FLA +K+S +E++A ++Q+L H + H
Sbjct: 96 LVSGGELFD---------------FLA-QKES-LSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 68 RDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 125
D+KPEN L +K DFGL+ I+ G +F++I G+ +VAPE++ + G E
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 126 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
+D+WSIGVITYILL G PF T+ + DF + + S AKDF++KLLV
Sbjct: 199 ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLV 258
Query: 186 KDPRARLTAAQALSHPWV 203
K+ R RLT +AL HPW+
Sbjct: 259 KETRKRLTIQEALRHPWI 276
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
+EK+ ++R +L V H +VHRD+KPEN L +D ++K TDFG S + PG+
Sbjct: 122 SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGE 178
Query: 102 KFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 154
K + + G+ Y+APE+++ G E D+WS GVI Y LL G PFW + + +
Sbjct: 179 KLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 155 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+ ++ F W S++ KD V + LV P+ R TA +AL+HP+ ++
Sbjct: 239 RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 19/205 (9%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
++ L GGEL D FLA K+S TE++A ++Q+L H
Sbjct: 89 VILILELVAGGELFD---------------FLA-EKES-LTEEEATEFLKQILNGVYYLH 131
Query: 62 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
+ H D+KPEN L +K DFGL+ I G +F++I G+ +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G E+D+WSIGVITYILL G PF T+ V +F + + + S AKDF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 180 VKKLLVKDPRARLTAAQALSHPWVR 204
+++LLVKDP+ R+T +L HPW++
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 19/205 (9%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
++ L GGEL D FLA K+S TE++A ++Q+L H
Sbjct: 89 VILILELVAGGELFD---------------FLA-EKES-LTEEEATEFLKQILNGVYYLH 131
Query: 62 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
+ H D+KPEN L +K DFGL+ I G +F++I G+ +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNY 191
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G E+D+WSIGVITYILL G PF T+ V +F + + + S AKDF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 180 VKKLLVKDPRARLTAAQALSHPWVR 204
+++LLVKDP+ R+T +L HPW++
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 19/205 (9%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
++ L GGEL D FLA K+S TE++A ++Q+L H
Sbjct: 89 VILILELVAGGELFD---------------FLA-EKES-LTEEEATEFLKQILNGVYYLH 131
Query: 62 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
+ H D+KPEN L +K DFGL+ I G +F++I G+ +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G E+D+WSIGVITYILL G PF T+ V +F + + + S AKDF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 180 VKKLLVKDPRARLTAAQALSHPWVR 204
+++LLVKDP+ R+T +L HPW++
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 19/205 (9%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
++ L GGEL D FLA K+S TE++A ++Q+L H
Sbjct: 89 VILILELVAGGELFD---------------FLA-EKES-LTEEEATEFLKQILNGVYYLH 131
Query: 62 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
+ H D+KPEN L +K DFGL+ I G +F++I G+ +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G E+D+WSIGVITYILL G PF T+ V +F + + + S AKDF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 180 VKKLLVKDPRARLTAAQALSHPWVR 204
+++LLVKDP+ R+T +L HPW++
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 19/205 (9%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
++ L GGEL D FLA K+S TE++A ++Q+L H
Sbjct: 89 VILILELVAGGELFD---------------FLA-EKES-LTEEEATEFLKQILNGVYYLH 131
Query: 62 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
+ H D+KPEN L +K DFGL+ I G +F++I G+ +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G E+D+WSIGVITYILL G PF T+ V +F + + + S AKDF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 180 VKKLLVKDPRARLTAAQALSHPWVR 204
+++LLVKDP+ R+T +L HPW++
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 19/205 (9%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
++ L GGEL D FLA K+S TE++A ++Q+L H
Sbjct: 89 VILILELVAGGELFD---------------FLA-EKES-LTEEEATEFLKQILNGVYYLH 131
Query: 62 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
+ H D+KPEN L +K DFGL+ I G +F++I G+ +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G E+D+WSIGVITYILL G PF T+ V +F + + + S AKDF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 180 VKKLLVKDPRARLTAAQALSHPWVR 204
+++LLVKDP+ R+T +L HPW++
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 19/205 (9%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
++ L GGEL D FLA K+S TE++A ++Q+L H
Sbjct: 89 VILILELVAGGELFD---------------FLA-EKES-LTEEEATEFLKQILNGVYYLH 131
Query: 62 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
+ H D+KPEN L +K DFGL+ I G +F++I G+ +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G E+D+WSIGVITYILL G PF T+ V +F + + + S AKDF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 180 VKKLLVKDPRARLTAAQALSHPWVR 204
+++LLVKDP+ R+T +L HPW++
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 19/205 (9%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
++ L GGEL D FLA K+S TE++A ++Q+L H
Sbjct: 89 VILILELVAGGELFD---------------FLA-EKES-LTEEEATEFLKQILNGVYYLH 131
Query: 62 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
+ H D+KPEN L +K DFGL+ I G +F++I G+ +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G E+D+WSIGVITYILL G PF T+ V +F + + + S AKDF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 180 VKKLLVKDPRARLTAAQALSHPWVR 204
+++LLVKDP+ R+T +L HPW++
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 19/205 (9%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
++ L GGEL D FLA K+S TE++A ++Q+L H
Sbjct: 88 VILILELVAGGELFD---------------FLA-EKES-LTEEEATEFLKQILNGVYYLH 130
Query: 62 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
+ H D+KPEN L +K DFGL+ I G +F++I G+ +VAPE++
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 190
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G E+D+WSIGVITYILL G PF T+ V +F + + + S AKDF
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 250
Query: 180 VKKLLVKDPRARLTAAQALSHPWVR 204
+++LLVKDP+ R+T +L HPW++
Sbjct: 251 IRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 19/205 (9%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
++ L GGEL D FLA K+S TE++A ++Q+L H
Sbjct: 88 VILILELVAGGELFD---------------FLA-EKES-LTEEEATEFLKQILNGVYYLH 130
Query: 62 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
+ H D+KPEN L +K DFGL+ I G +F++I G+ +VAPE++
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 190
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G E+D+WSIGVITYILL G PF T+ V +F + + + S AKDF
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 250
Query: 180 VKKLLVKDPRARLTAAQALSHPWVR 204
+++LLVKDP+ R+T +L HPW++
Sbjct: 251 IRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 19/205 (9%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
++ L GGEL D FLA K+S TE++A ++Q+L H
Sbjct: 89 VILILELVAGGELFD---------------FLA-EKES-LTEEEATEFLKQILNGVYYLH 131
Query: 62 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
+ H D+KPEN L +K DFGL+ I G +F++I G+ +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G E+D+WSIGVITYILL G PF T+ V +F + + + S AKDF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 180 VKKLLVKDPRARLTAAQALSHPWVR 204
+++LLVKDP+ R+T +L HPW++
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 19/205 (9%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
++ L GGEL D FLA K+S TE++A ++Q+L H
Sbjct: 89 VILILELVAGGELFD---------------FLA-EKES-LTEEEATEFLKQILNGVYYLH 131
Query: 62 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
+ H D+KPEN L +K DFGL+ I G +F++I G+ +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G E+D+WSIGVITYILL G PF T+ V +F + + + S AKDF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 180 VKKLLVKDPRARLTAAQALSHPWVR 204
+++LLVKDP+ R+T +L HPW++
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 19/205 (9%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
++ L GGEL D FLA K+S TE++A ++Q+L H
Sbjct: 89 VILIGELVAGGELFD---------------FLA-EKES-LTEEEATEFLKQILNGVYYLH 131
Query: 62 LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
+ H D+KPEN L +K DFGL+ I G +F++I G+ +VAPE++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ G E+D+WSIGVITYILL G PF T+ V +F + + + S AKDF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 180 VKKLLVKDPRARLTAAQALSHPWVR 204
+++LLVKDP+ R+T +L HPW++
Sbjct: 252 IRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 117/204 (57%), Gaps = 5/204 (2%)
Query: 41 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 99
Y+E A+ +RQ+L CH + ++HRD+KP L S + + +K FG++ +
Sbjct: 129 YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES 188
Query: 100 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 158
G VG+ +++APEV+KR+ G DVW GVI +ILL G PF+ T++ +F+ ++
Sbjct: 189 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGII 247
Query: 159 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI-S 217
+ K + W IS SAKD V+++L+ DP R+T +AL+HPW++E D I +
Sbjct: 248 KGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE-RDRYAYKIHLPE 306
Query: 218 VLNNMRQFVKYSRLKQFALRALAS 241
+ +R+F +LK L A++S
Sbjct: 307 TVEQLRKFNARRKLKGAVLAAVSS 330
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 112/217 (51%), Gaps = 24/217 (11%)
Query: 1 MILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 60
MI F GGEL +++ + ++ +E +A +RQ+ +
Sbjct: 125 MIYEF---MSGGELFEKVADEH----------------NKMSEDEAVEYMRQVCKGLCHM 165
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
H + VH D+KPEN +F + K + LK DFGL+ + P + + G+A + APEV +
Sbjct: 166 HENNYVHLDLKPENIMF-TTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG 224
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
K G +D+WS+GV++YILL G PF + +D + V + + IS KDF
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 284
Query: 180 VKKLLVKDPRARLTAAQALSHPWVREG---GDASEIP 213
++KLL+ DP R+T QAL HPW+ G G S+IP
Sbjct: 285 IRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 321
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 31/266 (11%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L +GGEL RI R D +TE++A+ +++ + H
Sbjct: 140 LLIVMECLDGGELFSRIQD---------------RGDQAFTEREASEIMKSIGEAIQYLH 184
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 185 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 241
Query: 122 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 172
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 242 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 300
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS-VLNNMRQFVKYSRL 231
S K ++ LL +P R+T + ++HPW+ + + P+ S VL ++ ++ +
Sbjct: 301 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE--RWEDV 358
Query: 232 KQFALRALASTLDDEELADLRDQFDA 257
K+ ALA+ D E ++ DA
Sbjct: 359 KEEMTSALATMRVDYEQIKIKKIEDA 384
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 31/266 (11%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L +GGEL RI R D +TE++A+ +++ + H
Sbjct: 134 LLIVMECLDGGELFSRIQD---------------RGDQAFTEREASEIMKSIGEAIQYLH 178
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 235
Query: 122 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 172
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 236 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 294
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS-VLNNMRQFVKYSRL 231
S K ++ LL +P R+T + ++HPW+ + + P+ S VL ++ ++ +
Sbjct: 295 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE--RWEDV 352
Query: 232 KQFALRALASTLDDEELADLRDQFDA 257
K+ ALA+ D E ++ DA
Sbjct: 353 KEEMTSALATMRVDYEQIKIKKIEDA 378
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 118/209 (56%), Gaps = 15/209 (7%)
Query: 41 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL------S 94
Y+E A+ +RQ+L CH + ++HRD+KP L S + + +K FG+ S
Sbjct: 127 YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES 186
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
+ G+ VG+ +++APEV+KR+ G DVW GVI +ILL G PF+ T++ +
Sbjct: 187 GLVAGGR-----VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERL 240
Query: 154 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 213
F+ +++ K + W IS SAKD V+++L+ DP R+T +AL+HPW++E D
Sbjct: 241 FEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE-RDRYAYK 299
Query: 214 IDI-SVLNNMRQFVKYSRLKQFALRALAS 241
I + + +R+F +LK L A++S
Sbjct: 300 IHLPETVEQLRKFNARRKLKGAVLAAVSS 328
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 112/217 (51%), Gaps = 24/217 (11%)
Query: 1 MILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 60
MI F GGEL +++ + ++ +E +A +RQ+ +
Sbjct: 231 MIYEF---MSGGELFEKVADEH----------------NKMSEDEAVEYMRQVCKGLCHM 271
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
H + VH D+KPEN +F + K + LK DFGL+ + P + + G+A + APEV +
Sbjct: 272 HENNYVHLDLKPENIMF-TTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG 330
Query: 121 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
K G +D+WS+GV++YILL G PF + +D + V + + IS KDF
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 390
Query: 180 VKKLLVKDPRARLTAAQALSHPWVREG---GDASEIP 213
++KLL+ DP R+T QAL HPW+ G G S+IP
Sbjct: 391 IRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 427
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 31/266 (11%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L +GGEL RI R D +TE++A+ +++ + H
Sbjct: 90 LLIVMECLDGGELFSRIQD---------------RGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 191
Query: 122 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 172
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 192 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 250
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS-VLNNMRQFVKYSRL 231
S K ++ LL +P R+T + ++HPW+ + + P+ S VL ++ ++ +
Sbjct: 251 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE--RWEDV 308
Query: 232 KQFALRALASTLDDEELADLRDQFDA 257
K+ ALA+ D E ++ DA
Sbjct: 309 KEEMTSALATMRVDYEQIKIKKIEDA 334
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 106/208 (50%), Gaps = 29/208 (13%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I K + E +A+VVV+ + H G+ HRD+KPEN L + + S +K DF L
Sbjct: 102 IHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLG 161
Query: 95 DFIKPGKKFQDI--------VGSAYYVAPEVLKRKSGPES------DVWSIGVITYILLC 140
IK I GSA Y+APEV++ S S D+WS+GVI YILL
Sbjct: 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
Query: 141 GRRPF---------WDKTE------DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
G PF WD+ E + +F+ + K +F K W IS +AKD + KLLV
Sbjct: 222 GYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLV 281
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIP 213
+D + RL+AAQ L HPWV+ + +P
Sbjct: 282 RDAKQRLSAAQVLQHPWVQGCAPENTLP 309
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 28/225 (12%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L +GGEL RI R D +TE++A+ +++ + H
Sbjct: 88 LLIVMECLDGGELFSRIQD---------------RGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L+ S + ++ LK TDFG + + + YYVAPEVL
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVL--- 189
Query: 122 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 172
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 190 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 248
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 217
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 249 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 109/206 (52%), Gaps = 31/206 (15%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I+K + E++A+ VVR + H G+ HRD+KPEN L +S ++ S +K DF L
Sbjct: 102 IQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLG 161
Query: 95 DFIKPGKKFQDI--------VGSAYYVAPEVLKRKSGPES------DVWSIGVITYILLC 140
+K I GSA Y+APEV++ + + D+WS+GV+ YI+L
Sbjct: 162 SGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLS 221
Query: 141 GRRPF---------WDKTE------DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 185
G PF WD+ E + +F+ + K +F K W IS+ AKD + KLLV
Sbjct: 222 GYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLV 281
Query: 186 KDPRARLTAAQALSHPWVREGGDASE 211
+D + RL+AAQ L HPWV+ G A E
Sbjct: 282 RDAKQRLSAAQVLQHPWVQ--GQAPE 305
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 28/225 (12%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L +GGEL RI R D +TE++A+ +++ + H
Sbjct: 95 LLIVMECLDGGELFSRIQD---------------RGDQAFTEREASEIMKSIGEAIQYLH 139
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 140 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 196
Query: 122 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 172
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 197 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 255
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 217
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 256 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 300
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 120/256 (46%), Gaps = 31/256 (12%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L +GGEL RI R D +TE++A+ +++ + H
Sbjct: 90 LLIVMECLDGGELFSRIQD---------------RGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 191
Query: 122 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 172
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 192 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 250
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS-VLNNMRQFVKYSRL 231
S K ++ LL +P R+T + ++HPW+ + + P+ S VL ++ ++ +
Sbjct: 251 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE--RWEDV 308
Query: 232 KQFALRALASTLDDEE 247
K+ ALA+ D E
Sbjct: 309 KEEMTSALATMRVDYE 324
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 28/225 (12%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L +GGEL RI R D +TE++A+ +++ + H
Sbjct: 94 LLIVMECLDGGELFSRIQD---------------RGDQAFTEREASEIMKSIGEAIQYLH 138
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 139 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 195
Query: 122 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 172
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 196 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 254
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 217
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 255 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 299
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 28/225 (12%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L +GGEL RI R D +TE++A+ +++ + H
Sbjct: 88 LLIVMECLDGGELFSRIQD---------------RGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 189
Query: 122 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 172
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 190 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 248
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 217
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 249 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 28/225 (12%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L +GGEL RI R D +TE++A+ +++ + H
Sbjct: 89 LLIVMECLDGGELFSRIQD---------------RGDQAFTEREASEIMKSIGEAIQYLH 133
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 134 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 190
Query: 122 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 172
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 191 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 249
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 217
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 250 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 294
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 28/225 (12%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L +GGEL RI R D +TE++A+ +++ + H
Sbjct: 96 LLIVMECLDGGELFSRIQD---------------RGDQAFTEREASEIMKSIGEAIQYLH 140
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 141 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 197
Query: 122 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 172
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 198 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 256
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 217
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 257 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 301
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 28/225 (12%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L +GGEL RI R D +TE++A+ +++ + H
Sbjct: 104 LLIVMECLDGGELFSRIQD---------------RGDQAFTEREASEIMKSIGEAIQYLH 148
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 149 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 205
Query: 122 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 172
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 206 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 264
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 217
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 265 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 309
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 104/173 (60%), Gaps = 11/173 (6%)
Query: 223 RQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 282
+QF ++ K+ ALR +A +L +EE+A L++ F+ ID DK+G I+ EE++ L K +
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGL-KRVGAN 59
Query: 283 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 342
LKES +L++ QA D + G +D+ EF+AATLH++++E D HL AAF FD D
Sbjct: 60 LKESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFTYFDKDGS 113
Query: 343 GFITPEELRMHTGLKGSIDPLLEE----ADIDKDGRISLSEFRRLLRTASISS 391
G+ITP+EL+ G D +EE D D DGRI +EF + SI+
Sbjct: 114 GYITPDELQQACEEFGVEDVRIEELXRDVDQDNDGRIDYNEFVAXXQKGSITG 166
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 119/266 (44%), Gaps = 31/266 (11%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L +GGEL RI R D +TE++A+ + + + H
Sbjct: 134 LLIVXECLDGGELFSRIQD---------------RGDQAFTEREASEIXKSIGEAIQYLH 178
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 235
Query: 122 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 172
GPE D WS+GVI YILLCG PF+ G + + +F W +
Sbjct: 236 -GPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEV 294
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS-VLNNMRQFVKYSRL 231
S K ++ LL +P R T + +HPW+ + + P+ S VL ++ ++ +
Sbjct: 295 SEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLHTSRVLKEDKE--RWEDV 352
Query: 232 KQFALRALASTLDDEELADLRDQFDA 257
K+ ALA+ D E ++ DA
Sbjct: 353 KEEXTSALATMRVDYEQIKIKKIEDA 378
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 101/197 (51%), Gaps = 32/197 (16%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGEL D I+ K R TE + +Q++ CH H +VHRD+
Sbjct: 92 GGELFDYIVEK-----------------KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDL 134
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDV 128
KPEN L ++ ++K DFGLS+ + G + GS Y APEV+ K +GPE DV
Sbjct: 135 KPENLLLD---DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDV 191
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAKDFVKKLLV 185
WS G++ Y++L GR PF D+ +FK+V + PDF +S A+ +++++V
Sbjct: 192 WSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQSLIRRMIV 244
Query: 186 KDPRARLTAAQALSHPW 202
DP R+T + PW
Sbjct: 245 ADPMQRITIQEIRRDPW 261
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 6 TRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGL 65
T L GGELLD+IL + ++E++A+ V+ + + H G+
Sbjct: 100 TELMRGGELLDKIL-----------------RQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 66 VHRDMKPENFLF-KSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKSG 123
VHRD+KP N L+ + L+ DFG + ++ +A +VAPEVLKR+
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 124 PES-DVWSIGVITYILLCGRRPFWDKTEDG---IFKEVLRNKPDFRRKPWPSISNSAKDF 179
E D+WS+G++ Y +L G PF + D I + K W ++S +AKD
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDL 262
Query: 180 VKKLLVKDPRARLTAAQALSHPWVRE 205
V K+L DP RLTA Q L HPWV +
Sbjct: 263 VSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 6 TRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGL 65
T L GGELLD+IL + ++E++A+ V+ + + H G+
Sbjct: 100 TELMRGGELLDKIL-----------------RQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 66 VHRDMKPENFLF-KSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKSG 123
VHRD+KP N L+ + L+ DFG + ++ +A +VAPEVLKR+
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 124 PES-DVWSIGVITYILLCGRRPFWDKTEDG---IFKEVLRNKPDFRRKPWPSISNSAKDF 179
E D+WS+G++ Y +L G PF + D I + K W ++S +AKD
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDL 262
Query: 180 VKKLLVKDPRARLTAAQALSHPWVRE 205
V K+L DP RLTA Q L HPWV +
Sbjct: 263 VSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 23/208 (11%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+ T L +GGELLD+IL + ++E++A+ V+ + + H
Sbjct: 91 VYVVTELMKGGELLDKIL-----------------RQKFFSEREASAVLFTITKTVEYLH 133
Query: 62 LHGLVHRDMKPENFLF-KSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLK 119
G+VHRD+KP N L+ + S++ DFG + ++ +A +VAPEVL+
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLE 193
Query: 120 RKS-GPESDVWSIGVITYILLCGRRPFW---DKTEDGIFKEVLRNKPDFRRKPWPSISNS 175
R+ D+WS+GV+ Y +L G PF D T + I + K W S+S++
Sbjct: 194 RQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253
Query: 176 AKDFVKKLLVKDPRARLTAAQALSHPWV 203
AKD V K+L DP RLTAA L HPW+
Sbjct: 254 AKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
E++ V Q+ H H + H D++PEN ++++ + S++K +FG + +KPG
Sbjct: 100 NEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLKPGD 158
Query: 102 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 160
F+ + + Y APEV + +D+WS+G + Y+LL G PF +T I + ++
Sbjct: 159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNA 218
Query: 161 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+ F + + IS A DFV +LLVK+ ++R+TA++AL HPW+++
Sbjct: 219 EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+ T L +GGELLD+IL + ++E++A+ V+ + + H
Sbjct: 91 VYVVTELXKGGELLDKIL-----------------RQKFFSEREASAVLFTITKTVEYLH 133
Query: 62 LHGLVHRDMKPENFLF-KSAKEDSSLKATDFGLSDFIKPGKKFQDI-VGSAYYVAPEVLK 119
G+VHRD+KP N L+ + S++ DFG + ++ +A +VAPEVL+
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLE 193
Query: 120 RKS-GPESDVWSIGVITYILLCGRRPFW---DKTEDGIFKEVLRNKPDFRRKPWPSISNS 175
R+ D+WS+GV+ Y L G PF D T + I + K W S+S++
Sbjct: 194 RQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253
Query: 176 AKDFVKKLLVKDPRARLTAAQALSHPWV 203
AKD V K L DP RLTAA L HPW+
Sbjct: 254 AKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 26/216 (12%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
L GGEL +RI +K ++E +A+ ++R+++ + H G+VH
Sbjct: 87 LLNGGELFERI-----------------KKKKHFSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRKSGPES 126
RD+KPEN LF ++ +K DFG + P + + + +Y APE+L + ES
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDES 189
Query: 127 -DVWSIGVITYILLCGRRPFWDK-------TEDGIFKEVLRNKPDFRRKPWPSISNSAKD 178
D+WS+GVI Y +L G+ PF + I K++ + F + W ++S AKD
Sbjct: 190 CDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKD 249
Query: 179 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
++ LL DP RL + + W+++G S P+
Sbjct: 250 LIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPL 285
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
+E D +++Q+L H + +VH D+KP+N L S +K DFG+S I
Sbjct: 129 SENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188
Query: 102 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 160
+ ++I+G+ Y+APE+L +D+W+IG+I Y+LL PF + + + +
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV 248
Query: 161 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
D+ + + S+S A DF++ LLVK+P R TA LSH W+++
Sbjct: 249 NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 15/188 (7%)
Query: 22 MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 81
M+ + F I + + +E++A +Q++ CH H +VHRD+KPEN L
Sbjct: 91 MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD--- 147
Query: 82 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILL 139
E ++K DFGLS+ + G + GS Y APEV+ K +GPE DVWS GVI Y++L
Sbjct: 148 EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 207
Query: 140 CGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 196
C R PF D++ +FK + + P F +S A +K++L+ +P R++ +
Sbjct: 208 CRRLPFDDESIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHE 260
Query: 197 ALSHPWVR 204
+ W +
Sbjct: 261 IMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 15/188 (7%)
Query: 22 MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 81
M+ + F I + + +E++A +Q++ CH H +VHRD+KPEN L
Sbjct: 90 MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD--- 146
Query: 82 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILL 139
E ++K DFGLS+ + G + GS Y APEV+ K +GPE DVWS GVI Y++L
Sbjct: 147 EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 206
Query: 140 CGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 196
C R PF D++ +FK + + P F +S A +K++L+ +P R++ +
Sbjct: 207 CRRLPFDDESIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHE 259
Query: 197 ALSHPWVR 204
+ W +
Sbjct: 260 IMQDDWFK 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 15/188 (7%)
Query: 22 MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 81
M+ + F I + + +E++A +Q++ CH H +VHRD+KPEN L
Sbjct: 81 MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD--- 137
Query: 82 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILL 139
E ++K DFGLS+ + G + GS Y APEV+ K +GPE DVWS GVI Y++L
Sbjct: 138 EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 197
Query: 140 CGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 196
C R PF D++ +FK + + P F +S A +K++L+ +P R++ +
Sbjct: 198 CRRLPFDDESIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHE 250
Query: 197 ALSHPWVR 204
+ W +
Sbjct: 251 IMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 15/188 (7%)
Query: 22 MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 81
M+ + F I + + +E++A +Q++ CH H +VHRD+KPEN L
Sbjct: 85 MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD--- 141
Query: 82 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILL 139
E ++K DFGLS+ + G + GS Y APEV+ K +GPE DVWS GVI Y++L
Sbjct: 142 EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 201
Query: 140 CGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 196
C R PF D++ +FK + + P F +S A +K++L+ +P R++ +
Sbjct: 202 CRRLPFDDESIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHE 254
Query: 197 ALSHPWVR 204
+ W +
Sbjct: 255 IMQDDWFK 262
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 20/206 (9%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
I+ +GGEL DRI I + TE D + ++Q+ H
Sbjct: 161 IVLVMEYVDGGELFDRI----------------IDESYNLTELDTILFMKQICEGIRHMH 204
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
++H D+KPEN L + ++ +K DFGL+ KP +K + G+ ++APEV+
Sbjct: 205 QMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD 263
Query: 122 --SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
S P +D+WS+GVI Y+LL G PF + +L + D + + IS AK+F
Sbjct: 264 FVSFP-TDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEF 322
Query: 180 VKKLLVKDPRARLTAAQALSHPWVRE 205
+ KLL+K+ R++A++AL HPW+ +
Sbjct: 323 ISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 99/204 (48%), Gaps = 26/204 (12%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGE+ D ++A R EK+A RQ++ CH +VHRD+
Sbjct: 97 GGEVFDYLVAH-----------------GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDV 128
K EN L + D ++K DFG S+ G K + GS Y APE+ K+ GPE DV
Sbjct: 140 KAENLLLDA---DMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 188
WS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +KK L+ +P
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNP 252
Query: 189 RARLTAAQALSHPWVREGGDASEI 212
R T Q + W+ G + E+
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGE+ D ++A R EK+A RQ++ CH +VHRD+
Sbjct: 97 GGEVFDYLVAH-----------------GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDV 128
K EN L + D ++K DFG S+ G K GS Y APE+ K+ GPE DV
Sbjct: 140 KAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 188
WS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +KK L+ +P
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNP 252
Query: 189 RARLTAAQALSHPWVREGGDASEI 212
R T Q + W+ G + E+
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGE+ D ++A R EK+A RQ++ CH +VHRD+
Sbjct: 97 GGEVFDYLVAH-----------------GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDV 128
K EN L + D ++K DFG S+ G K GS Y APE+ K+ GPE DV
Sbjct: 140 KAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 188
WS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +KK L+ +P
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNP 252
Query: 189 RARLTAAQALSHPWVREGGDASEI 212
R T Q + W+ G + E+
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGE+ D ++A R EK+A RQ++ CH +VHRD+
Sbjct: 97 GGEVFDYLVAH-----------------GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDV 128
K EN L + D ++K DFG S+ G K GS Y APE+ K+ GPE DV
Sbjct: 140 KAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 188
WS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +KK L+ +P
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNP 252
Query: 189 RARLTAAQALSHPWVREGGDASEI 212
R T Q + W+ G + E+
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGE+ D ++A R EK+A RQ++ CH +VHRD+
Sbjct: 95 GGEVFDYLVAH-----------------GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDL 137
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDV 128
K EN L + D ++K DFG S+ G K GS Y APE+ K+ GPE DV
Sbjct: 138 KAENLLLDA---DMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDV 194
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 188
WS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +K+ LV +P
Sbjct: 195 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKRFLVLNP 250
Query: 189 RARLTAAQALSHPWVREGGDASEI 212
R T Q + W+ G + E+
Sbjct: 251 IKRGTLEQIMKDRWINAGHEEDEL 274
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 110/238 (46%), Gaps = 32/238 (13%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAW---------------------FLAIRKDSR 40
I LC GG LLD++ + +T A R+
Sbjct: 103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLD 162
Query: 41 YTEKDAAV--VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFI 97
+ +++ + ++RQ+ H G+ HRD+KPENFLF S + +K DFGLS +F
Sbjct: 163 FVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF-STNKSFEIKLVDFGLSKEFY 221
Query: 98 K--PGKKFQDIV--GSAYYVAPEVLKRKS---GPESDVWSIGVITYILLCGRRPFWDKTE 150
K G+ + G+ Y+VAPEVL + GP+ D WS GV+ ++LL G PF +
Sbjct: 222 KLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVND 281
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 208
+VL K F + +S A+D + LL ++ R A +AL HPW+ + D
Sbjct: 282 ADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 102/226 (45%), Gaps = 32/226 (14%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
I GGEL D I K+ R EK++ + +Q+L CH
Sbjct: 91 IFMVMEYVSGGELFDYIC-----------------KNGRLDEKESRRLFQQILSGVDYCH 133
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
H +VHRD+KPEN L + + K DFGLS+ + G+ + GS Y APEV+ +
Sbjct: 134 RHMVVHRDLKPENVLLDA---HMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGR 190
Query: 122 --SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSA 176
+GPE D+WS GVI Y LLCG PF D +FK++ + P + ++ S
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQY-------LNPSV 243
Query: 177 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNM 222
+K +L DP R T H W ++ P D S + M
Sbjct: 244 ISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTM 289
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 35/210 (16%)
Query: 1 MILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 60
M++ + GGEL D I K R E +A + +Q+L C
Sbjct: 88 MVMEYV---SGGELFDYIC-----------------KHGRVEEMEARRLFQQILSAVDYC 127
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
H H +VHRD+KPEN L + + K DFGLS+ + G+ +D GS Y APEV+
Sbjct: 128 HRHMVVHRDLKPENVLLDA---HMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISG 184
Query: 121 K--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNS 175
+ +GPE D+WS GVI Y LLCG PF D+ +FK++ + P++ ++ S
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY-------LNRS 237
Query: 176 AKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+ +L DP R T H W ++
Sbjct: 238 VATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGE+ D ++A W EK+A RQ++ CH +VHRD+
Sbjct: 90 GGEVFDYLVA--------HGWM---------KEKEARAKFRQIVSAVQYCHQKFIVHRDL 132
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDV 128
K EN L + D ++K DFG S+ G K GS Y APE+ K+ GPE DV
Sbjct: 133 KAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 189
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 188
WS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +KK L+ +P
Sbjct: 190 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNP 245
Query: 189 RARLTAAQALSHPWVREGGDASEI 212
R T Q + W+ G + E+
Sbjct: 246 SKRGTLEQIMKDRWMNVGHEDDEL 269
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGE+ D ++A R EK+A RQ++ CH +VHRD+
Sbjct: 97 GGEVFDYLVAH-----------------GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDV 128
K EN L + D ++K DFG S+ G K G+ Y APE+ K+ GPE DV
Sbjct: 140 KAENLLLDA---DMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDV 196
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 188
WS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +KK L+ +P
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNP 252
Query: 189 RARLTAAQALSHPWVREGGDASEI 212
R T Q + W+ G + E+
Sbjct: 253 SKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGE+ D ++A R EK+A RQ++ CH +VHRD+
Sbjct: 98 GGEVFDYLVAH-----------------GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDL 140
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDV 128
K EN L + D ++K DFG S+ G K G+ Y APE+ K+ GPE DV
Sbjct: 141 KAENLLLDA---DMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDV 197
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 188
WS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +K+ LV +P
Sbjct: 198 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKRFLVLNP 253
Query: 189 RARLTAAQALSHPWVREGGDASEI 212
R T Q + W+ G + E+
Sbjct: 254 IKRGTLEQIMKDRWINAGHEEDEL 277
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 99/210 (47%), Gaps = 35/210 (16%)
Query: 1 MILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 60
M++ + GGEL D I K R E +A + +Q+L C
Sbjct: 88 MVMEYV---SGGELFDYIC-----------------KHGRVEEMEARRLFQQILSAVDYC 127
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
H H +VHRD+KPEN L + + K DFGLS+ + G+ + GS Y APEV+
Sbjct: 128 HRHMVVHRDLKPENVLLDA---HMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG 184
Query: 121 K--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNS 175
+ +GPE D+WS GVI Y LLCG PF D+ +FK++ + P++ ++ S
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY-------LNRS 237
Query: 176 AKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+ +L DP R T H W ++
Sbjct: 238 VATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L +GGEL RI R D +TE++A+ +++ + H
Sbjct: 90 LLIVMECLDGGELFSRIQD---------------RGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L+ S + ++ LK TDFG A E K
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGF--------------------AKETTGEK 174
Query: 122 SGPESDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAK 177
D+WS+GVI YILLCG PF+ G+ + + +F W +S K
Sbjct: 175 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 234
Query: 178 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 217
++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 235 MLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 274
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGE+ D ++A R EK+A RQ++ CH +VHRD+
Sbjct: 97 GGEVFDYLVAH-----------------GRXKEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDV 128
K EN L + D ++K DFG S+ G K G+ Y APE+ K+ GPE DV
Sbjct: 140 KAENLLLDA---DXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDV 196
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 188
WS+GVI Y L+ G PF + + + VLR K R P+ S ++ +KK L+ +P
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YXSTDCENLLKKFLILNP 252
Query: 189 RARLTAAQALSHPWVREGGDASEI 212
R T Q W G + E+
Sbjct: 253 SKRGTLEQIXKDRWXNVGHEDDEL 276
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 102/183 (55%), Gaps = 7/183 (3%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I +R E+ A V +L+ + H G++HRD+K ++ L D +K +DFG
Sbjct: 111 IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFC 167
Query: 95 DFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
+ K + + +VG+ Y++APE++ R GPE D+WS+G++ ++ G P++++
Sbjct: 168 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 227
Query: 153 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG-DASE 211
K + N P R K +S S K F+ +LLV+DP R TAA+ L HP++ + G AS
Sbjct: 228 AMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 286
Query: 212 IPI 214
+P+
Sbjct: 287 VPL 289
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 102/183 (55%), Gaps = 7/183 (3%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I +R E+ A V +L+ + H G++HRD+K ++ L D +K +DFG
Sbjct: 107 IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFC 163
Query: 95 DFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
+ K + + +VG+ Y++APE++ R GPE D+WS+G++ ++ G P++++
Sbjct: 164 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 223
Query: 153 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG-DASE 211
K + N P R K +S S K F+ +LLV+DP R TAA+ L HP++ + G AS
Sbjct: 224 AMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 282
Query: 212 IPI 214
+P+
Sbjct: 283 VPL 285
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 102/183 (55%), Gaps = 7/183 (3%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I +R E+ A V +L+ + H G++HRD+K ++ L D +K +DFG
Sbjct: 116 IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFC 172
Query: 95 DFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
+ K + + +VG+ Y++APE++ R GPE D+WS+G++ ++ G P++++
Sbjct: 173 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 232
Query: 153 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG-DASE 211
K + N P R K +S S K F+ +LLV+DP R TAA+ L HP++ + G AS
Sbjct: 233 AMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 291
Query: 212 IPI 214
+P+
Sbjct: 292 VPL 294
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 102/183 (55%), Gaps = 7/183 (3%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I +R E+ A V +L+ + H G++HRD+K ++ L D +K +DFG
Sbjct: 118 IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFC 174
Query: 95 DFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
+ K + + +VG+ Y++APE++ R GPE D+WS+G++ ++ G P++++
Sbjct: 175 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 234
Query: 153 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG-DASE 211
K + N P R K +S S K F+ +LLV+DP R TAA+ L HP++ + G AS
Sbjct: 235 AMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 293
Query: 212 IPI 214
+P+
Sbjct: 294 VPL 296
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 99/180 (55%), Gaps = 6/180 (3%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I +R E+ A V +L+ + H G++HRD+K ++ L D +K +DFG
Sbjct: 161 IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFC 217
Query: 95 DFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
+ K + + +VG+ Y++APE++ R GPE D+WS+G++ ++ G P++++
Sbjct: 218 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 277
Query: 153 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 212
K + N P R K +S S K F+ +LLV+DP R TAA+ L HP++ + G + I
Sbjct: 278 AMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 336
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 99/180 (55%), Gaps = 6/180 (3%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I +R E+ A V +L+ + H G++HRD+K ++ L D +K +DFG
Sbjct: 238 IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFC 294
Query: 95 DFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
+ K + + +VG+ Y++APE++ R GPE D+WS+G++ ++ G P++++
Sbjct: 295 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 354
Query: 153 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 212
K + N P R K +S S K F+ +LLV+DP R TAA+ L HP++ + G + I
Sbjct: 355 AMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 413
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DF
Sbjct: 122 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADF 178
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + D+ G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 179 GWS-VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 237
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 238 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DF
Sbjct: 101 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADF 157
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + D+ G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 158 GWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 217 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DF
Sbjct: 96 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADF 152
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + D+ G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 153 GWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 212 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DF
Sbjct: 97 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADF 153
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + D+ G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 154 GWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 213 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DFG S
Sbjct: 99 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 155
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + D+ G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 156 -VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 215 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DFG S
Sbjct: 102 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 158
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + D+ G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 159 -VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 218 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K SR+ E+ A + ++ + CH ++HRD+KPEN L S E LK DFG S
Sbjct: 103 LQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGWS 159
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G PF T
Sbjct: 160 -VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
++ + R + PDF ++ A+D + +LL + RLT A+ L HPW++
Sbjct: 219 YRRISRVEFTFPDF-------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K SR+ E+ A + ++ + CH ++HRD+KPEN L S E LK DFG S
Sbjct: 103 LQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGWS 159
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G PF T
Sbjct: 160 -VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
++ + R + PDF ++ A+D + +LL + RLT A+ L HPW++
Sbjct: 219 YRRISRVEFTFPDF-------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DF
Sbjct: 96 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADF 152
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + ++ G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 153 GWS-VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 212 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 11/166 (6%)
Query: 41 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-P 99
++E +A + Q++ H HG++HRD+ N L + ++K DFGL+ +K P
Sbjct: 109 FSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT---RNMNIKIADFGLATQLKMP 165
Query: 100 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEV 157
+K + G+ Y++PE+ R + G ESDVWS+G + Y LL GR PF D ++ + K V
Sbjct: 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
Query: 158 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
L D+ + SI AKD + +LL ++P RL+ + L HP++
Sbjct: 226 L---ADYEMPSFLSI--EAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DF
Sbjct: 113 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADF 169
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 170 GWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 228
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 229 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DF
Sbjct: 122 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADF 178
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 179 GWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 237
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 238 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 120 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 176
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 177 KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF+++++ + DF K +P A+D V+KLLV D RL
Sbjct: 237 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 274
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 123 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 179
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 180 KVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF+++++ + DF K +P A+D V+KLLV D RL
Sbjct: 240 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DF
Sbjct: 99 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADF 155
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 156 GWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 215 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DF
Sbjct: 101 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADF 157
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 158 GWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 217 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DF
Sbjct: 96 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADF 152
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 153 GWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 212 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 124 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 180
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 181 KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF+++++ + DF K +P A+D V+KLLV D RL
Sbjct: 241 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 278
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 120 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 176
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 177 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF+++++ + DF K +P A+D V+KLLV D RL
Sbjct: 237 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 274
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DFG S
Sbjct: 104 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 160
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 161 -VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 220 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DF
Sbjct: 98 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADF 154
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 155 GWS-VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 213
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 214 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DFG S
Sbjct: 102 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 158
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 159 -VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 218 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 123 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 179
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 180 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF+++++ + DF K +P A+D V+KLLV D RL
Sbjct: 240 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DFG S
Sbjct: 98 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 154
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 155 VH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 213
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 214 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DFG S
Sbjct: 96 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 152
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 153 VH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 211
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 212 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 257
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DFG S
Sbjct: 103 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 159
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 160 -VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 218
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 219 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DF
Sbjct: 97 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADF 153
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 154 GWS-VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 213 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 123 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 179
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 180 KVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF ++++ + DF K +P A+D V+KLLV D RL
Sbjct: 240 GLIFAKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 121 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 177
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 178 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF+++++ + DF K +P A+D V+KLLV D RL
Sbjct: 238 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 121 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 177
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 178 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF+++++ + DF K +P A+D V+KLLV D RL
Sbjct: 238 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 123 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 179
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 180 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF+++++ + DF K +P A+D V+KLLV D RL
Sbjct: 240 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DFG S
Sbjct: 99 LQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGE---LKIADFGWS 155
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 156 -VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT 214
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 215 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 121 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 177
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 178 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF+++++ + DF K +P A+D V+KLLV D RL
Sbjct: 238 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 105 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 161
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 162 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 221
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 196
IF+++++ + DF K +P A+D V+KLLV D RL +
Sbjct: 222 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEE 263
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DFG S
Sbjct: 102 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 158
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 159 -VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 218 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DFG S
Sbjct: 99 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 155
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 156 VH-APSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 215 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 121 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 177
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 178 KVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF+++++ + DF K +P A+D V+KLLV D RL
Sbjct: 238 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 123 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 179
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 180 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF ++++ + DF K +P A+D V+KLLV D RL
Sbjct: 240 GLIFAKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DF
Sbjct: 97 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADF 153
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 154 GWSCH-APSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 213 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 124 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 180
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 181 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF+++++ + DF K +P A+D V+KLLV D RL
Sbjct: 241 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 278
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DFG S
Sbjct: 102 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 158
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 159 -VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 218 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 123 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 179
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 180 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF+++++ + DF K +P A+D V+KLLV D RL
Sbjct: 240 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DFG S
Sbjct: 104 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 160
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 161 -VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 220 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DFG S
Sbjct: 99 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 155
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 156 VH-APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 215 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DF
Sbjct: 101 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADF 157
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + + G+ Y+ PE ++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 158 GWS-VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 217 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 128 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 184
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 185 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 244
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 196
IF+++++ + DF K +P A+D V+KLLV D RL +
Sbjct: 245 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEE 286
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK DFG S
Sbjct: 99 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 155
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 156 -VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 215 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 95/175 (54%), Gaps = 6/175 (3%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I R E+ A V +L+ A H G++HRD+K ++ L D +K +DFG
Sbjct: 132 IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL---DGRVKLSDFGFC 188
Query: 95 DFI-KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
I K K + +VG+ Y++APEV+ R E D+WS+G++ ++ G P++ +
Sbjct: 189 AQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ 248
Query: 153 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 207
K LR+ P + K +S +DF++++LV+DP+ R TA + L HP++ + G
Sbjct: 249 AMKR-LRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG 302
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 99 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 155
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 156 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 215
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 196
IF+++++ + DF K +P A+D V+KLLV D RL +
Sbjct: 216 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEE 257
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 98 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 154
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 155 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 214
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 196
IF+++++ + DF K +P A+D V+KLLV D RL +
Sbjct: 215 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEE 256
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 100 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 156
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 157 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 216
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 196
IF+++++ + DF K +P A+D V+KLLV D RL +
Sbjct: 217 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEE 258
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 101 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 157
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 158 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 217
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 196
IF+++++ + DF K +P A+D V+KLLV D RL +
Sbjct: 218 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEE 259
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
+ ++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK +F
Sbjct: 98 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIANF 154
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTE 150
G S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 155 GWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 213
Query: 151 DGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 214 QETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K S++ E+ A + ++ + CH ++HRD+KPEN L SA E LK +FG S
Sbjct: 102 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIANFGWS 158
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ PF T
Sbjct: 159 VH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 154 FKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+K + R + PDF ++ A+D + +LL +P R + L HPW+
Sbjct: 218 YKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGE+ D ++A R EK+A RQ++ CH +VHRD+
Sbjct: 98 GGEVFDYLVAH-----------------GRMKEKEARAKFRQIVSAVQYCHQKYIVHRDL 140
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDV 128
K EN L D ++K DFG S+ G K GS Y APE+ K+ GPE DV
Sbjct: 141 KAENLLLDG---DMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 197
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 188
WS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +KKLLV +P
Sbjct: 198 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKLLVLNP 253
Query: 189 RARLTAAQALSHPWVREGGDASEI 212
R + Q + W+ G + E+
Sbjct: 254 IKRGSLEQIMKDRWMNVGHEEEEL 277
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
IRK + E +++ H G++HRD+KPEN L ED ++ TDFG +
Sbjct: 126 IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 182
Query: 95 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
+ P K VG+A YV+PE+L KS +S D+W++G I Y L+ G PF E
Sbjct: 183 KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 242
Query: 151 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
IF+++++ + DF +P A+D V+KLLV D RL
Sbjct: 243 YLIFQKIIKLEYDFPAAFFP----KARDLVEKLLVLDATKRL 280
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 102/193 (52%), Gaps = 12/193 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I +R E+ A V +LR + H G++HRD+K ++ L S D +K +DFG
Sbjct: 132 IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS---DGRIKLSDFGFC 188
Query: 95 DFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
+ K K + +VG+ Y++APEV+ R G E D+WS+G++ ++ G P++++
Sbjct: 189 AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ 248
Query: 153 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 212
+ + + P R K +S+ + F+ +LV++P R TA + L HP+++ G S
Sbjct: 249 AMRRIRDSLPP-RVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLKLAGPPS-- 305
Query: 213 PIDISVLNNMRQF 225
++ MRQ+
Sbjct: 306 ----CIVPLMRQY 314
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 83 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 242 LHKILVENPSARIT 255
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 83 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 242 LHKILVENPSARIT 255
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 82 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 241 LHKILVENPSARIT 254
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 83 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 242 LHKILVENPSARIT 255
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 82 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 241 LHKILVENPSARIT 254
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 82 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 241 LHKILVENPSARIT 254
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 82 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 241 LHKILVENPSARIT 254
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 82 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 241 LHKILVENPSARIT 254
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 83 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 242 LHKILVENPSARIT 255
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 83 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 242 LHKILVENPSARIT 255
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 82 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 241 LHKILVENPSARIT 254
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 83 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 242 LHKILVENPSARIT 255
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 83 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 242 LHKILVENPSARIT 255
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 82 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 241 LHKILVENPSARIT 254
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 82 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 241 LHKILVENPSARIT 254
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 81 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 124 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 239
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 240 LHKILVENPSARIT 253
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 83 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 242 LHKILVENPSARIT 255
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 22/196 (11%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGEL +RI R++E +A +Q++ + CH + HRD+
Sbjct: 98 GGELFERIC-----------------NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 140
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDV 128
K EN L + LK DFG S + + VG+ Y+APEVL +K G +DV
Sbjct: 141 KLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADV 199
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAKDFVKKLLVK 186
WS GV Y++L G PF D E F++ + + + IS + + ++ V
Sbjct: 200 WSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVA 259
Query: 187 DPRARLTAAQALSHPW 202
DP R++ + +H W
Sbjct: 260 DPAKRISIPEIRNHEW 275
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 82 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 241 LHKILVENPSARIT 254
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 82 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 241 LHKILVENPSARIT 254
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 22/196 (11%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGEL +RI R++E +A +Q++ + CH + HRD+
Sbjct: 99 GGELFERIC-----------------NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDV 128
K EN L + LK DFG S + + VG+ Y+APEVL +K G +DV
Sbjct: 142 KLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADV 200
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAKDFVKKLLVK 186
WS GV Y++L G PF D E F++ + + + IS + + ++ V
Sbjct: 201 WSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVA 260
Query: 187 DPRARLTAAQALSHPW 202
DP R++ + +H W
Sbjct: 261 DPAKRISIPEIRNHEW 276
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 82 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 241 LHKILVENPSARIT 254
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 32/187 (17%)
Query: 48 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI 106
+ + Q+LR A CH H ++HRD+KP+N L S D +LK DFGL+ F P + +
Sbjct: 123 IYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHE 179
Query: 107 VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL------ 158
V + +Y AP+VL +K D+WSIG I ++ G+ F T+D ++
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 159 --RNKPD--------------FRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQAL 198
R P F +KPW P D + +L DP R++A A+
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299
Query: 199 SHPWVRE 205
+HP+ ++
Sbjct: 300 NHPYFKD 306
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 5 FTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHG 64
F C GGEL DRI D E DA Q++ H G
Sbjct: 82 FLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK 121
+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAPE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 122 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
DVWS G++ +L G P WD+ D + + PW I ++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 180 VKKLLVKDPRARLT 193
+ K+LV++P AR+T
Sbjct: 241 LHKILVENPSARIT 254
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 32/187 (17%)
Query: 48 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI 106
+ + Q+LR A CH H ++HRD+KP+N L S D +LK DFGL+ F P + +
Sbjct: 123 IYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHE 179
Query: 107 VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL------ 158
V + +Y AP+VL +K D+WSIG I ++ G+ F T+D ++
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 159 --RNKPD--------------FRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQAL 198
R P F +KPW P D + +L DP R++A A+
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299
Query: 199 SHPWVRE 205
+HP+ ++
Sbjct: 300 NHPYFKD 306
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 22/196 (11%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGEL +RI R++E +A +Q++ + CH + HRD+
Sbjct: 99 GGELFERIC-----------------NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDV 128
K EN L + LK FG S + +D VG+ Y+APEVL +K G +DV
Sbjct: 142 KLENTLLDGSPA-PRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADV 200
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAKDFVKKLLVK 186
WS GV Y++L G PF D E F++ + + + IS + + ++ V
Sbjct: 201 WSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVA 260
Query: 187 DPRARLTAAQALSHPW 202
DP R++ + +H W
Sbjct: 261 DPAKRISIPEIRNHEW 276
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 32/201 (15%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGEL +RI R++E +A +Q+L + CH + HRD+
Sbjct: 100 GGELYERIC-----------------NAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDL 142
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDV 128
K EN L + LK DFG S + + VG+ Y+APEVL R+ G +DV
Sbjct: 143 KLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADV 201
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLR-------NKPDFRRKPWPSISNSAKDFVK 181
WS GV Y++L G PF D E +++ ++ + PD R IS +
Sbjct: 202 WSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR-----ISPECCHLIS 256
Query: 182 KLLVKDPRARLTAAQALSHPW 202
++ V DP R++ + +H W
Sbjct: 257 RIFVADPATRISIPEIKTHSW 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 22/196 (11%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGEL +RI R++E +A +Q++ + CH + HRD+
Sbjct: 99 GGELFERIC-----------------NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDV 128
K EN L + LK FG S + + VG+ Y+APEVL +K G +DV
Sbjct: 142 KLENTLLDGSPA-PRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADV 200
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAKDFVKKLLVK 186
WS GV Y++L G PF D E F++ + + + IS + + ++ V
Sbjct: 201 WSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVA 260
Query: 187 DPRARLTAAQALSHPW 202
DP R++ + +H W
Sbjct: 261 DPAKRISIPEIRNHEW 276
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 101/179 (56%), Gaps = 21/179 (11%)
Query: 217 SVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA 276
++L N++ F K + LK+ AL +A L D E+ +LR+ F A+DVD +G++S +E+ L
Sbjct: 25 TLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLK 84
Query: 277 KDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAA--- 333
K + ++ + ++L+ ID N G + +++F+AAT+ ++ +L+ +
Sbjct: 85 K-IGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATI---------DKQTYLKKEVCLIP 134
Query: 334 FEKFDIDRDGFITPEELRMHTG--------LKGSIDPLLEEADIDKDGRISLSEFRRLL 384
F+ FDID +G I+ EEL+ G + +ID LL+E D++ DG I EF ++
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F + ++ +TE+ A +++ H +V+RD+K EN + +D +K TDF
Sbjct: 93 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDF 149
Query: 92 GLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT 149
GL + I G + G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++
Sbjct: 150 GLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 209
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 195
+ +F+ +L + F R ++S AK + LL KDP+ RL
Sbjct: 210 HERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGG 251
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F + ++ +TE+ A +++ H +V+RD+K EN + +D +K TDF
Sbjct: 98 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDF 154
Query: 92 GLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT 149
GL + I G + G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++
Sbjct: 155 GLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 214
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 195
+ +F+ +L + F R ++S AK + LL KDP+ RL
Sbjct: 215 HERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGG 256
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F + ++ +TE+ A +++ H +V+RD+K EN + +D +K TDF
Sbjct: 93 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDF 149
Query: 92 GLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT 149
GL + I G + G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++
Sbjct: 150 GLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 209
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 195
+ +F+ +L + F R ++S AK + LL KDP+ RL
Sbjct: 210 HERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGG 251
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 9/171 (5%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++K + E+ A ++ ++ CH ++HRD+KPEN LK DFG S
Sbjct: 114 LQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPEN---LLLGLKGELKIADFGWS 170
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
P + + + G+ Y+ PE+++ R + D+W IGV+ Y LL G PF + +
Sbjct: 171 VH-APSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNET 229
Query: 154 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
++ +++ F S+ A+D + KLL +P RL AQ +HPWVR
Sbjct: 230 YRRIVKVDLKFP----ASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVR 276
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F + ++ +TE+ A +++ H +V+RD+K EN + +D +K TDF
Sbjct: 96 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDF 152
Query: 92 GLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT 149
GL + I G + G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++
Sbjct: 153 GLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 212
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 195
+ +F+ +L + F R ++S AK + LL KDP+ RL
Sbjct: 213 HERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGG 254
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F + ++ +TE+ A +++ H +V+RD+K EN + +D +K TDF
Sbjct: 93 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDF 149
Query: 92 GLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT 149
GL + I G + G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++
Sbjct: 150 GLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 209
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 195
+ +F+ +L + F R ++S AK + LL KDP+ RL
Sbjct: 210 HERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGG 251
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F + ++ +TE+ A +++ H +V+RD+K EN + +D +K TDF
Sbjct: 93 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDF 149
Query: 92 GLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT 149
GL + I G + G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++
Sbjct: 150 GLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 209
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 195
+ +F+ +L + F R ++S AK + LL KDP+ RL
Sbjct: 210 HERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGG 251
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F + ++ +TE+ A +++ H +V+RD+K EN + +D +K TDF
Sbjct: 93 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDF 149
Query: 92 GLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT 149
GL + I G + G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++
Sbjct: 150 GLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 209
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 195
+ +F+ +L + F R ++S AK + LL KDP+ RL
Sbjct: 210 HERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGG 251
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 88/150 (58%), Gaps = 11/150 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +EE+ L++ F ID D +G+I+ +E++ L K + +L ES + +++ A D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAADIDK 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT---GL 356
G +D+ EF+AAT+H+++LE ++ +AF FD D G+IT +E++ GL
Sbjct: 60 SGTIDYGEFIAATVHLNKLEREEN------LVSAFSYFDKDGSGYITLDEIQQACKDFGL 113
Query: 357 KG-SIDPLLEEADIDKDGRISLSEFRRLLR 385
ID +++E D D DG+I EF ++R
Sbjct: 114 DDIHIDDMIKEIDQDNDGQIDYGEFAAMMR 143
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 22/196 (11%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 70
GGEL +RI R++E +A +Q++ + H + HRD+
Sbjct: 99 GGELFERIC-----------------NAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDL 141
Query: 71 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDV 128
K EN L + LK DFG S + + VG+ Y+APEVL +K G +DV
Sbjct: 142 KLENTLLDGSPA-PRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADV 200
Query: 129 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAKDFVKKLLVK 186
WS GV Y++L G PF D E F++ + + + IS + + ++ V
Sbjct: 201 WSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVA 260
Query: 187 DPRARLTAAQALSHPW 202
DP R++ + +H W
Sbjct: 261 DPAKRISIPEIRNHEW 276
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PG 100
TE +A +RQ++ H + ++HRD+K N ED +K DFGL+ ++ G
Sbjct: 115 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDG 171
Query: 101 KKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-L 158
++ + + G+ Y+APEVL +K E DVWSIG I Y LL G+ PF E KE L
Sbjct: 172 ERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYL 227
Query: 159 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
R K + P I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 228 RIKKNEYSIPK-HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 282
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PG 100
TE +A +RQ++ H + ++HRD+K N ED +K DFGL+ ++ G
Sbjct: 115 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDG 171
Query: 101 KKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-L 158
++ + + G+ Y+APEVL +K E DVWSIG I Y LL G+ PF E KE L
Sbjct: 172 ERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYL 227
Query: 159 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
R K + P I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 228 RIKKNEYSIPK-HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 282
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 9/184 (4%)
Query: 22 MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 81
M+ + ++K R+ E+ +A + ++ CH ++HRD+KPEN L
Sbjct: 93 MLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG 152
Query: 82 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLC 140
E LK DFG S P + + + G+ Y+ PE+++ K+ E D+W GV+ Y L
Sbjct: 153 E---LKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV 208
Query: 141 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 200
G PF + + ++ F P +S+ +KD + KLL P RL + H
Sbjct: 209 GMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 264
Query: 201 PWVR 204
PWV+
Sbjct: 265 PWVK 268
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PG 100
TE +A +RQ++ H + ++HRD+K N ED +K DFGL+ ++ G
Sbjct: 119 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDG 175
Query: 101 KKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-L 158
++ + + G+ Y+APEVL +K E DVWSIG I Y LL G+ PF E KE L
Sbjct: 176 ERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYL 231
Query: 159 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
R K + P I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 232 RIKKNEYSIPK-HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 286
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 9/184 (4%)
Query: 22 MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 81
M+ + ++K R+ E+ +A + ++ CH ++HRD+KPEN L
Sbjct: 92 MLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG 151
Query: 82 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLC 140
E LK DFG S P + + + G+ Y+ PE+++ K+ E D+W GV+ Y L
Sbjct: 152 E---LKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV 207
Query: 141 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 200
G PF + + ++ F P +S+ +KD + KLL P RL + H
Sbjct: 208 GMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263
Query: 201 PWVR 204
PWV+
Sbjct: 264 PWVK 267
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 9/184 (4%)
Query: 22 MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 81
M+ + ++K R+ E+ +A + ++ CH ++HRD+KPEN L
Sbjct: 92 MLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG 151
Query: 82 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLC 140
E LK DFG S P + + + G+ Y+ PE+++ K+ E D+W GV+ Y L
Sbjct: 152 E---LKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV 207
Query: 141 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 200
G PF + + ++ F P +S+ +KD + KLL P RL + H
Sbjct: 208 GMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263
Query: 201 PWVR 204
PWV+
Sbjct: 264 PWVK 267
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PG 100
TE +A +RQ++ H + ++HRD+K N ED +K DFGL+ ++ G
Sbjct: 113 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDG 169
Query: 101 KKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-L 158
++ + + G+ Y+APEVL +K E DVWSIG I Y LL G+ PF E KE L
Sbjct: 170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYL 225
Query: 159 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
R K + P I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 226 RIKKNEYSIPK-HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 280
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PG 100
TE +A +RQ++ H + ++HRD+K N ED +K DFGL+ ++ G
Sbjct: 137 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDG 193
Query: 101 KKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-L 158
++ + + G+ Y+APEVL +K E DVWSIG I Y LL G+ PF E KE L
Sbjct: 194 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYL 249
Query: 159 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
R K + P I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 250 RIKKNEYSIPK-HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 304
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 97/177 (54%), Gaps = 24/177 (13%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F + + R+TE + + V +++ H G+++RD+K EN L S + + TDF
Sbjct: 147 FTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS---NGHVVLTDF 203
Query: 92 GLS-DFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDV--WSIGVITYILLCGRRPFW 146
GLS +F+ ++ D G+ Y+AP++++ SG + V WS+GV+ Y LL G PF
Sbjct: 204 GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF- 262
Query: 147 DKTEDG-------IFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAA 195
T DG I + +L+++P P+P +S AKD +++LL+KDP+ RL
Sbjct: 263 --TVDGEKNSQAEISRRILKSEP-----PYPQEMSALAKDLIQRLLMKDPKKRLGCG 312
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PG 100
TE +A +RQ++ H + ++HRD+K N ED +K DFGL+ ++ G
Sbjct: 139 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDG 195
Query: 101 KKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-L 158
++ + + G+ Y+APEVL +K E DVWSIG I Y LL G+ PF E KE L
Sbjct: 196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYL 251
Query: 159 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
R K + P I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 252 RIKKNEYSIPK-HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 306
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 12/145 (8%)
Query: 56 VAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 111
V+A +LH +V+RD+K EN + +D +K TDFGL + IK G + G+
Sbjct: 119 VSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPE 175
Query: 112 YVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 170
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R P
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP 235
Query: 171 SISNSAKDFVKKLLVKDPRARLTAA 195
AK + LL KDP+ RL
Sbjct: 236 ----EAKSLLSGLLKKDPKQRLGGG 256
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 12/145 (8%)
Query: 56 VAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 111
V+A +LH +V+RD+K EN + +D +K TDFGL + IK G + G+
Sbjct: 258 VSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTPE 314
Query: 112 YVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 170
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR---- 370
Query: 171 SISNSAKDFVKKLLVKDPRARLTAA 195
++ AK + LL KDP+ RL
Sbjct: 371 TLGPEAKSLLSGLLKKDPKQRLGGG 395
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 12/145 (8%)
Query: 56 VAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 111
V+A +LH +V+RD+K EN + +D +K TDFGL + IK G + G+
Sbjct: 118 VSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPE 174
Query: 112 YVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 170
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R P
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP 234
Query: 171 SISNSAKDFVKKLLVKDPRARLTAA 195
AK + LL KDP+ RL
Sbjct: 235 ----EAKSLLSGLLKKDPKQRLGGG 255
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 12/145 (8%)
Query: 56 VAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 111
V+A +LH +V+RD+K EN + +D +K TDFGL + IK G + G+
Sbjct: 261 VSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTPE 317
Query: 112 YVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 170
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR---- 373
Query: 171 SISNSAKDFVKKLLVKDPRARLTAA 195
++ AK + LL KDP+ RL
Sbjct: 374 TLGPEAKSLLSGLLKKDPKQRLGGG 398
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 12/145 (8%)
Query: 56 VAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 111
V+A +LH +V+RD+K EN + +D +K TDFGL + IK G + G+
Sbjct: 120 VSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPE 176
Query: 112 YVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 170
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R P
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP 236
Query: 171 SISNSAKDFVKKLLVKDPRARLTAA 195
AK + LL KDP+ RL
Sbjct: 237 ----EAKSLLSGLLKKDPKQRLGGG 257
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
+E A + +++ H ++HRD+KP N L ED +K DFG+S+ K
Sbjct: 135 SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLL---VGEDGHIKIADFGVSNEFKGSD 191
Query: 102 KF-QDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 156
+ VG+ ++APE L SG DVW++GV Y + G+ PF D+ + +
Sbjct: 192 ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSK 251
Query: 157 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ +F +P I+ KD + ++L K+P +R+ + HPWV
Sbjct: 252 IKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F+ + ++ + E A + ++ H G+++RD+KPEN + +K TDF
Sbjct: 109 FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDF 165
Query: 92 GLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKT 149
GL + I G G+ Y+APE+L R + D WS+G + Y +L G PF +
Sbjct: 166 GLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVR 204
++L+ K + P ++ A+D +KKLL ++ +RL A + +HP+ R
Sbjct: 226 RKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F+ + ++ + E A + ++ H G+++RD+KPEN + +K TDF
Sbjct: 109 FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDF 165
Query: 92 GLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKT 149
GL + I G G+ Y+APE+L R + D WS+G + Y +L G PF +
Sbjct: 166 GLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVR 204
++L+ K + P ++ A+D +KKLL ++ +RL A + +HP+ R
Sbjct: 226 RKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 180
Query: 102 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 155
++ V S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 156 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 185
V NK P RKPW N+ A DF+ KLL
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 186 KDPRARLTAAQALSHPWVRE 205
D + RLTA +A++HP+ ++
Sbjct: 301 YDHQERLTALEAMTHPYFQQ 320
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK
Sbjct: 124 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 181
Query: 102 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 155
++ V S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 241
Query: 156 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 185
V NK P RKPW N+ A DF+ KLL
Sbjct: 242 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 301
Query: 186 KDPRARLTAAQALSHPWVRE 205
D + RLTA +A++HP+ ++
Sbjct: 302 YDHQERLTALEAMTHPYFQQ 321
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 180
Query: 102 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 155
++ V S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 156 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 185
V NK P RKPW N+ A DF+ KLL
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 186 KDPRARLTAAQALSHPWVRE 205
D + RLTA +A++HP+ ++
Sbjct: 301 YDHQERLTALEAMTHPYFQQ 320
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK
Sbjct: 125 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 182
Query: 102 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 155
++ V S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 183 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 242
Query: 156 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 185
V NK P RKPW N+ A DF+ KLL
Sbjct: 243 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 302
Query: 186 KDPRARLTAAQALSHPWVRE 205
D + RLTA +A++HP+ ++
Sbjct: 303 YDHQERLTALEAMTHPYFQQ 322
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 180
Query: 102 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 155
++ V S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 156 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 185
V NK P RKPW N+ A DF+ KLL
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 186 KDPRARLTAAQALSHPWVRE 205
D + RLTA +A++HP+ ++
Sbjct: 301 YDHQERLTALEAMTHPYFQQ 320
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK
Sbjct: 124 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 181
Query: 102 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 155
++ V S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 241
Query: 156 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 185
V NK P RKPW N+ A DF+ KLL
Sbjct: 242 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 301
Query: 186 KDPRARLTAAQALSHPWVRE 205
D + RLTA +A++HP+ ++
Sbjct: 302 YDHQERLTALEAMTHPYFQQ 321
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 180
Query: 102 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 155
++ V S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 156 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 185
V NK P RKPW N+ A DF+ KLL
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 186 KDPRARLTAAQALSHPWVRE 205
D + RLTA +A++HP+ ++
Sbjct: 301 YDHQERLTALEAMTHPYFQQ 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 180
Query: 102 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 155
++ V S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 156 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 185
V NK P RKPW N+ A DF+ KLL
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 186 KDPRARLTAAQALSHPWVRE 205
D + RLTA +A++HP+ ++
Sbjct: 301 YDHQERLTALEAMTHPYFQQ 320
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 180
Query: 102 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 155
++ V S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 156 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 185
V NK P RKPW N+ A DF+ KLL
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 186 KDPRARLTAAQALSHPWVRE 205
D + RLTA +A++HP+ ++
Sbjct: 301 YDHQERLTALEAMTHPYFQQ 320
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 15/176 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F I + R E A+ + RQ++ L ++HRD+K EN + ED ++K DF
Sbjct: 118 FAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDF 174
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKT 149
G + +++ GK F G+ Y APEVL GPE ++WS+GV Y L+ PF +
Sbjct: 175 GSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE-- 232
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
L + P +S V LL P R T + ++ PWV +
Sbjct: 233 --------LEETVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F + K+ +TE+D + ++ H G+++RD+KPEN L E+ +K TDF
Sbjct: 114 FTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDF 170
Query: 92 GLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKT 149
GLS + I KK G+ Y+APEV+ R+ +S D WS GV+ + +L G PF K
Sbjct: 171 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230
Query: 150 EDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 195
+L+ K P F +S A+ ++ L ++P RL A
Sbjct: 231 RKETMTMILKAKLGMPQF-------LSPEAQSLLRMLFKRNPANRLGAG 272
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-D 95
++ TE + A +++ L+ H +HRD+K N L + + K DFG++
Sbjct: 118 RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNT---EGHAKLADFGVAGQ 174
Query: 96 FIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 154
K ++G+ +++APEV++ +D+WS+G+ + G+ P+ D
Sbjct: 175 LTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI 234
Query: 155 KEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 210
+ N P RKP W S++ DFVK+ LVK P R TA Q L HP+VR S
Sbjct: 235 FMIPTNPPPTFRKPELW---SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 6/164 (3%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 101
E A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P +
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQS 171
Query: 102 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 160
K ++VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 172 KRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 161 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
+ P +S +DF+ + L D R +A + L H +++
Sbjct: 232 GTPELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F + K+ +TE+D + ++ H G+++RD+KPEN L E+ +K TDF
Sbjct: 115 FTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDF 171
Query: 92 GLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKT 149
GLS + I KK G+ Y+APEV+ R+ +S D WS GV+ + +L G PF K
Sbjct: 172 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 231
Query: 150 EDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 195
+L+ K P F +S A+ ++ L ++P RL A
Sbjct: 232 RKETMTMILKAKLGMPQF-------LSPEAQSLLRMLFKRNPANRLGAG 273
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 35/211 (16%)
Query: 1 MILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 60
MI+ + EGGEL F +RK R+ A ++
Sbjct: 83 MIMDY---IEGGEL-----------------FSLLRKSQRFPNPVAKFYAAEVCLALEYL 122
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
H +++RD+KPEN L ++ +K TDFG + ++ P + + G+ Y+APEV+
Sbjct: 123 HSKDIIYRDLKPENILLD---KNGHIKITDFGFAKYV-PDVTYX-LCGTPDYIAPEVVST 177
Query: 121 KSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
K +S D WS G++ Y +L G PF+D ++++L + F P + KD
Sbjct: 178 KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDL 233
Query: 180 VKKLLVKDPRARLTAAQ-----ALSHPWVRE 205
+ +L+ +D RL Q +HPW +E
Sbjct: 234 LSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F + K+ +TE+D + ++ H G+++RD+KPEN L E+ +K TDF
Sbjct: 114 FTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDF 170
Query: 92 GLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKT 149
GLS + I KK G+ Y+APEV+ R+ +S D WS GV+ + +L G PF K
Sbjct: 171 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230
Query: 150 EDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 195
+L+ K P F +S A+ ++ L ++P RL A
Sbjct: 231 RKETMTMILKAKLGMPQF-------LSPEAQSLLRMLFKRNPANRLGAG 272
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 6/164 (3%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 101
E A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P +
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQS 171
Query: 102 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 160
K +VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 172 KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 161 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
+ P +S +DF+ + L D R +A + L H +++
Sbjct: 232 GTPELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK
Sbjct: 144 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 201
Query: 102 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 202 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 261
Query: 151 -----DGIFKEVLRNKPDF-----------RRKPWPSISNS---------AKDFVKKLLV 185
DG+ + + + + RKPW N+ A DF+ KLL
Sbjct: 262 KVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 321
Query: 186 KDPRARLTAAQALSHPWVRE 205
D + RLTA +A++HP+ ++
Sbjct: 322 YDHQERLTALEAMTHPYFQQ 341
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 6/164 (3%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 101
E A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P +
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQS 171
Query: 102 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 160
K +VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 161 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
+ P +S +DF+ + L D R +A + L H +++
Sbjct: 232 GTPELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 9/174 (5%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PG 100
TE +A +RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G
Sbjct: 124 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDG 180
Query: 101 KKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 159
++ +D+ G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +
Sbjct: 181 ERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 240
Query: 160 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 213
N+ R I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 241 NEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 290
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 9/174 (5%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PG 100
TE +A +RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDG 196
Query: 101 KKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 159
++ +D+ G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +
Sbjct: 197 ERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 256
Query: 160 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 213
N+ R I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 257 NEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 6/164 (3%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 101
E A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P +
Sbjct: 116 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQS 172
Query: 102 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 160
K +VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 173 KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 232
Query: 161 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
+ P +S +DF+ + L D R +A + + H +++
Sbjct: 233 GTPELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I+K R+ E A +++ H G+++RD+K +N L + K DFG+
Sbjct: 115 IQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMC 171
Query: 95 -DFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
+ I G G+ Y+APE+L+ GP D W++GV+ Y +LCG PF + ED
Sbjct: 172 KEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD 231
Query: 153 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA------LSHPWVRE 205
+F+ +L ++ + W + A +K + K+P RL + L HP+ +E
Sbjct: 232 LFEAILNDEVVY--PTW--LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 6/164 (3%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 101
E A V R+ L+ H + ++HR++K +N L D S+K TDFG I P +
Sbjct: 116 EGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGM---DGSVKLTDFGFCAQITPEQS 172
Query: 102 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 160
K +VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 173 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 232
Query: 161 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
+ P +S +DF+ + L D R +A + + H +++
Sbjct: 233 GTPELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N L E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F + K+ +TE+D + ++ H G+++RD+KPEN L E+ +K TDF
Sbjct: 118 FTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL---DEEGHIKLTDF 174
Query: 92 GLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKT 149
GLS + I KK G+ Y+APEV+ R+ S D WS GV+ + +L G PF K
Sbjct: 175 GLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKD 234
Query: 150 EDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 195
+L+ K P F +S A+ ++ L ++P RL +
Sbjct: 235 RKETMTLILKAKLGMPQF-------LSTEAQSLLRALFKRNPANRLGSG 276
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 29/217 (13%)
Query: 8 LCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 67
C G + D ++ TL W A + R++LR + H H ++H
Sbjct: 108 FCGAGSVTD-LIKNTKGNTLKEEWI--------------AYICREILRGLSHLHQHKVIH 152
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRKSGPE- 125
RD+K +N L E++ +K DFG+S + + + +G+ Y++APEV+ P+
Sbjct: 153 RDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDA 209
Query: 126 -----SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN-KPDFRRKPWPSISNSAKDF 179
SD+WS+G+ + G P D + RN P + K W S + F
Sbjct: 210 TYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW---SKKFQSF 266
Query: 180 VKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 216
++ LVK+ R Q + HP++R+ + ++ I +
Sbjct: 267 IESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQL 303
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQ 186
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQ 186
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQ 186
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQ 186
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQ 185
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 245
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 246 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 305
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 306 YDHQSRLTAREAMEHPY 322
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 127 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQ 184
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 244
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 245 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 304
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 305 YDHQSRLTAREAMEHPY 321
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 134 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 191
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 192 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 251
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 252 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 311
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 312 YDHQSRLTAREAMEHPY 328
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 9/174 (5%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PG 100
TE +A +RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDG 196
Query: 101 KKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 159
++ + + G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +
Sbjct: 197 ERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 256
Query: 160 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 213
N+ R I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 257 NEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 185
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 245
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 246 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 305
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 306 YDHQSRLTAREAMEHPY 322
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 51 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 107
+ ML H HG+VH D+KP NFL D LK DFG+++ ++P V
Sbjct: 134 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQV 189
Query: 108 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 155
G+ Y+ PE +K R++G DVWS+G I Y + G+ PF + + I K
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 248
Query: 156 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 249 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 9/174 (5%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PG 100
TE +A +RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDG 196
Query: 101 KKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 159
++ + + G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +
Sbjct: 197 ERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 256
Query: 160 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 213
N+ R I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 257 NEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQ 186
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 150
++ V S Y+ PE+L + D+WS+G + ++ + PF+ +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 151 ---------DGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 186 KDPRARLTAAQALSHPW 202
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 51 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 107
+ ML H HG+VH D+KP NFL D LK DFG+++ ++P V
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 108 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 155
G+ Y+ PE +K R++G DVWS+G I Y + G+ PF + + I K
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 276
Query: 156 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 277 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 51 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 107
+ ML H HG+VH D+KP NFL D LK DFG+++ ++P V
Sbjct: 134 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV 189
Query: 108 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 155
G+ Y+ PE +K R++G DVWS+G I Y + G+ PF + + I K
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 248
Query: 156 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 249 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 51 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 107
+ ML H HG+VH D+KP NFL D LK DFG+++ ++P V
Sbjct: 114 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV 169
Query: 108 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 155
G+ Y+ PE +K R++G DVWS+G I Y + G+ PF + + I K
Sbjct: 170 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 228
Query: 156 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 229 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 51 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 107
+ ML H HG+VH D+KP NFL D LK DFG+++ ++P V
Sbjct: 118 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV 173
Query: 108 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 155
G+ Y+ PE +K R++G DVWS+G I Y + G+ PF + + I K
Sbjct: 174 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 232
Query: 156 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 233 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 51 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 107
+ ML H HG+VH D+KP NFL D LK DFG+++ ++P V
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 108 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 155
G+ Y+ PE +K R++G DVWS+G I Y + G+ PF + + I K
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 276
Query: 156 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 277 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 51 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 107
+ ML H HG+VH D+KP NFL D LK DFG+++ ++P V
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 108 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 155
G+ Y+ PE +K R++G DVWS+G I Y + G+ PF + + I K
Sbjct: 218 GAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 276
Query: 156 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 277 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVL- 118
H G+V+RD+K +N L +D +K DFG+ G K + G+ Y+APE+L
Sbjct: 136 HSKGIVYRDLKLDNILLD---KDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILL 192
Query: 119 KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 178
+K D WS GV+ Y +L G+ PF + E+ +F + + P + R W + AKD
Sbjct: 193 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W--LEKEAKD 248
Query: 179 FVKKLLVKDPRARLTAAQAL-SHPWVREGG----DASEI----------PIDISVLNNMR 223
+ KL V++P RL + HP RE + EI P D S N +
Sbjct: 249 LLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCS--NFDK 306
Query: 224 QFVKYSRLKQFALRALASTLD 244
+F+ FA RAL +++D
Sbjct: 307 EFLNEKPRLXFADRALINSMD 327
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 51 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 107
+ ML H HG+VH D+KP NFL D LK DFG+++ ++P V
Sbjct: 115 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV 170
Query: 108 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 155
G+ Y+ PE +K R++G DVWS+G I Y + G+ PF + + I K
Sbjct: 171 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 229
Query: 156 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 230 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 88/201 (43%), Gaps = 34/201 (16%)
Query: 40 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 99
+++E+ +V QML+ H G+VHRD+KP N + ED LK DFGL+
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKILDFGLAR--HA 176
Query: 100 GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR-------------- 143
+ V + +Y APEV+ D+WS+G I +L G+
Sbjct: 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
Query: 144 ---------PFWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRA 190
F K D K +++ P RK + P S A D ++K+L D
Sbjct: 237 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK 296
Query: 191 RLTAAQALSHPWVREGGDASE 211
RLTAAQAL+HP+ D E
Sbjct: 297 RLTAAQALTHPFFEPFRDPEE 317
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 80/182 (43%), Gaps = 35/182 (19%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSA 110
Q L+ CH H +HRD+KPEN L + S +K DFG + + P + D V +
Sbjct: 110 QTLQAVNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVATR 166
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVL-----R 159
+Y +PE+L + GP DVW+IG + LL G P W D + ++ L R
Sbjct: 167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPR 225
Query: 160 NKPDFRRKPW-------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSH 200
++ F + P+IS A +K L DP RLT Q L H
Sbjct: 226 HQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285
Query: 201 PW 202
P+
Sbjct: 286 PY 287
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L A CH ++HRD+KP+N L E LK DFGL+ F P +K+ V +
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTL 164
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 168
+Y AP+VL +K D+WS+G I ++ G F +E + R K
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN 224
Query: 169 WPSISN-------------------------SAKDFVKKLLVKDPRARLTAAQALSHPWV 203
WP+++ S D + K+L DP R+TA QAL H +
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
Query: 204 RE 205
+E
Sbjct: 285 KE 286
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 26/201 (12%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVL- 118
H G+V+RD+K +N L +D +K DFG+ G K G+ Y+APE+L
Sbjct: 135 HSKGIVYRDLKLDNILLD---KDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILL 191
Query: 119 KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 178
+K D WS GV+ Y +L G+ PF + E+ +F + + P + R W + AKD
Sbjct: 192 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W--LEKEAKD 247
Query: 179 FVKKLLVKDPRARLTAAQAL-SHPWVREGG----DASEI----------PIDISVLNNMR 223
+ KL V++P RL + HP RE + EI P D S N +
Sbjct: 248 LLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCS--NFDK 305
Query: 224 QFVKYSRLKQFALRALASTLD 244
+F+ FA RAL +++D
Sbjct: 306 EFLNEKPRLSFADRALINSMD 326
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 87/200 (43%), Gaps = 34/200 (17%)
Query: 41 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 100
++E+ +V QML+ H G+VHRD+KP N + ED LK DFGL+
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKILDFGLAR--HAD 195
Query: 101 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR--------------- 143
+ V + +Y APEV+ D+WS+G I +L G+
Sbjct: 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 255
Query: 144 --------PFWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRAR 191
F K D K +++ P RK + P S A D ++K+L D R
Sbjct: 256 KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKR 315
Query: 192 LTAAQALSHPWVREGGDASE 211
LTAAQAL+HP+ D E
Sbjct: 316 LTAAQALTHPFFEPFRDPEE 335
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L A CH ++HRD+KP+N L E LK DFGL+ F P +K+ V +
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTL 164
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 168
+Y AP+VL +K D+WS+G I ++ G F +E + R K
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKN 224
Query: 169 WPSISN-------------------------SAKDFVKKLLVKDPRARLTAAQALSHPWV 203
WP+++ S D + K+L DP R+TA QAL H +
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
Query: 204 RE 205
+E
Sbjct: 285 KE 286
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 84/191 (43%), Gaps = 44/191 (23%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH + ++HRD+KP+N L + LK DFGL+ F P F V +
Sbjct: 116 QLLQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIPVNTFSSEVVTL 172
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 168
+Y AP+VL R D+WS G I ++ G +P + T D +E L+ D P
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG-KPLFPGTND---EEQLKLIFDIMGTP 228
Query: 169 ----WPSISNSAK------------------------------DFVKKLLVKDPRARLTA 194
WPS++ K DF+ LL +P RL+A
Sbjct: 229 NESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSA 288
Query: 195 AQALSHPWVRE 205
QAL HPW E
Sbjct: 289 KQALHHPWFAE 299
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 122 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPY 178
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238
Query: 154 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 187
+ + N+P + +P + ++ A+D + K+LV D
Sbjct: 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 298
Query: 188 PRARLTAAQALSHPWVREGGDASEI 212
P R++ AL HP++ D +E+
Sbjct: 299 PAKRISVDDALQHPYINVWYDPAEV 323
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 129 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPY 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 154 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 187
+ + N+P + +P + ++ A+D + K+LV D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 188 PRARLTAAQALSHPWVREGGDASEI 212
P R++ AL HP++ D +E+
Sbjct: 306 PAKRISVDDALQHPYINVWYDPAEV 330
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 129 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPY 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 154 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 187
+ + N+P + +P + ++ A+D + K+LV D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 188 PRARLTAAQALSHPWVREGGDASEI 212
P R++ AL HP++ D +E+
Sbjct: 306 PAKRISVDDALQHPYINVWYDPAEV 330
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L A CH ++HRD+KP+N L E LK DFGL+ F P +K+ + +
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIVTL 164
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 168
+Y AP+VL +K D+WS+G I ++ G F +E + R K
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN 224
Query: 169 WPSISN-------------------------SAKDFVKKLLVKDPRARLTAAQALSHPWV 203
WP+++ S D + K+L DP R+TA QAL H +
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
Query: 204 RE 205
+E
Sbjct: 285 KE 286
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A + K + + Q+LR H ++HRD+KP N L + +
Sbjct: 123 LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD 182
Query: 83 DSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITY 136
LK DFGL+ P + V + +Y APE++ G D+WS+G I
Sbjct: 183 ---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA 239
Query: 137 ILLCGR-----RPFWDKTED--GIF----------------KEVLRNKPDFRRKPW---- 169
+L R + + D+ GI + L + P + PW
Sbjct: 240 EMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF 299
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
P+ + A D + K+L +P R+ QAL+HP++ + D S+ PI
Sbjct: 300 PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 344
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 179
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 154 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 187
+ + N+P + +P + ++ A+D + K+LV D
Sbjct: 240 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 299
Query: 188 PRARLTAAQALSHPWVREGGDASEI 212
P R++ AL HP++ D +E+
Sbjct: 300 PAKRISVDDALQHPYINVWYDPAEV 324
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 179
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 154 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 187
+ + N+P + +P + ++ A+D + K+LV D
Sbjct: 240 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 299
Query: 188 PRARLTAAQALSHPWVREGGDASEI 212
P R++ AL HP++ D +E+
Sbjct: 300 PAKRISVDDALQHPYINVWYDPAEV 324
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 178
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238
Query: 154 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 187
+ + N+P + +P + ++ A+D + K+LV D
Sbjct: 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 298
Query: 188 PRARLTAAQALSHPWVREGGDASEI 212
P R++ AL HP++ D +E+
Sbjct: 299 PAKRISVDDALQHPYINVWYDPAEV 323
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 154 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 187
+ + N+P + +P + ++ A+D + K+LV D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 188 PRARLTAAQALSHPWVREGGDASEI 212
P R++ AL HP++ D +E+
Sbjct: 306 PAKRISVDDALQHPYINVWYDPAEV 330
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 128 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 184
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 185 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 244
Query: 154 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 187
+ + N+P + +P + ++ A+D + K+LV D
Sbjct: 245 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 304
Query: 188 PRARLTAAQALSHPWVREGGDASEI 212
P R++ AL HP++ D +E+
Sbjct: 305 PAKRISVDDALQHPYINVWYDPAEV 329
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 186
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 246
Query: 154 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 187
+ + N+P + +P + ++ A+D + K+LV D
Sbjct: 247 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 306
Query: 188 PRARLTAAQALSHPWVREGGDASEI 212
P R++ AL HP++ D +E+
Sbjct: 307 PAKRISVDDALQHPYINVWYDPAEV 331
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 154 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 187
+ + N+P + +P + ++ A+D + K+LV D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 188 PRARLTAAQALSHPWVREGGDASEI 212
P R++ AL HP++ D +E+
Sbjct: 306 PAKRISVDDALQHPYINVWYDPAEV 330
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 50/209 (23%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 223
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+G I IL GR W+K + +++
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQL 279
Query: 158 LRNKPDFRRKPWPSISN----------------------------------SAKDFVKKL 183
P+F +K P++ N A+D + K+
Sbjct: 280 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 339
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEI 212
LV DP R++ AL HP++ D +E+
Sbjct: 340 LVIDPAKRISVDDALQHPYINVWYDPAEV 368
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 186
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 246
Query: 154 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 187
+ + N+P + +P + ++ A+D + K+LV D
Sbjct: 247 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 306
Query: 188 PRARLTAAQALSHPWVREGGDASEI 212
P R++ AL HP++ D +E+
Sbjct: 307 PAKRISVDDALQHPYINVWYDPAEV 331
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 121 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 177
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 229
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 230 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 174
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 226
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 227 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 50/208 (24%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPY 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+GVI ++ G F W+K + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 158 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 183
P+F +K P++ ++ A+D + K+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASE 211
LV D R++ +AL HP++ D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 178
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 230
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 231 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 50/208 (24%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPY 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+GVI ++ G F W+K + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 158 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 183
P+F +K P++ ++ A+D + K+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASE 211
LV D R++ +AL HP++ D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 221
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 273
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 274 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 223
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 283
Query: 154 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 187
+ + N+P + +P + ++ A+D + K+LV D
Sbjct: 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 343
Query: 188 PRARLTAAQALSHPWVREGGDASEI 212
P R++ AL HP++ D +E+
Sbjct: 344 PAKRISVDDALQHPYINVWYDPAEV 368
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 178
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 230
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 231 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 179
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 231
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 232 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 174
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 226
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S + ++ L P R T + +HPW+++
Sbjct: 227 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 179
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 231
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 232 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 179
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 231
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 232 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 193
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 245
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 246 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 42/204 (20%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+ +
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPE 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I ++C + F W+K + +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 154 ----------FKEVLRNKPDFR----RKPWPSI------------SNSAKDFVKKLLVKD 187
+ + N+P + K +P + ++ A+D + K+LV D
Sbjct: 246 PAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 188 PRARLTAAQALSHPWVREGGDASE 211
R++ +AL HP++ D SE
Sbjct: 306 ASKRISVDEALQHPYINVWYDPSE 329
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 221
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 273
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 274 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 194
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 246
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 247 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 206
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 258
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 259 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 157 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 213
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 265
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 266 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 145 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 201
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 202 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 253
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S + ++ L P R T + +HPW+++
Sbjct: 254 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + S LK DFGL+
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---SDLKICDFGLARV 175
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK-- 148
P + V + +Y APE++ G D+WS+G I +L R F K
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 149 ---------------TED---GI---FKEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
ED GI + L + P + PW P+ + A D + K+
Sbjct: 236 LDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 295
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 296 LTFNPHKRIEVEQALAHPYLAQYYDPSDEPI 326
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 193
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 245
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S + ++ L P R T + +HPW+++
Sbjct: 246 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 194
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 246
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S + ++ L P R T + +HPW+++
Sbjct: 247 --VSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 221
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 273
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S + ++ L P R T + +HPW+++
Sbjct: 274 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 194
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 246
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S + ++ L P R T + +HPW+++
Sbjct: 247 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 50/208 (24%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 179
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+G I ++C + F W+K + +++
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK----VIEQL 235
Query: 158 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 183
P+F +K P++ ++ A+D + K+
Sbjct: 236 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 295
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASE 211
LV D R++ +AL HP++ D SE
Sbjct: 296 LVIDASKRISVDEALQHPYINVWYDPSE 323
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 170 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 226
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++R + FR++
Sbjct: 227 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 278
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S + ++ L P R T + +HPW+++
Sbjct: 279 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 40/221 (18%)
Query: 7 RLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 66
+L GG +LD I+ +++ K E A ++R++L H +G +
Sbjct: 93 KLLSGGSVLD-IIKHIVAK--------GEHKSGVLDESTIATILREVLEGLEYLHKNGQI 143
Query: 67 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG------KKFQDIVGSAYYVAPEVLKR 120
HRD+K N L ED S++ DFG+S F+ G K + VG+ ++APEV+++
Sbjct: 144 HRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ 200
Query: 121 KSGPE--SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 178
G + +D+WS G+ L G P+ + L+N P PS+ +D
Sbjct: 201 VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP-------PSLETGVQD 253
Query: 179 -------------FVKKLLVKDPRARLTAAQALSHPWVREG 206
+ L KDP R TAA+ L H + ++
Sbjct: 254 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 28/205 (13%)
Query: 9 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVA-AECHL----- 62
CEGG+L ++ +T K+ +Y +++ + V L +A ECH
Sbjct: 89 CEGGDL---------ASVITKG-----TKERQYLDEEFVLRVMTQLTLALKECHRRSDGG 134
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRK 121
H ++HRD+KP N +F K++ +K DFGL+ + + F ++ VG+ YY++PE + R
Sbjct: 135 HTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRM 191
Query: 122 SGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
S E SD+WS+G + Y L PF ++ + ++ K FRR P+ S+ + +
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDELNEII 248
Query: 181 KKLLVKDPRARLTAAQALSHPWVRE 205
++L R + + L +P + E
Sbjct: 249 TRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 19/173 (10%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
TE VV +Q L H + ++HRD+K N LF D +K DFG+S K +
Sbjct: 133 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVS--AKNTR 187
Query: 102 KFQ---DIVGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
Q +G+ Y++APEV+ R ++DVWS+G+ + P +
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR 247
Query: 153 IFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ ++ +++P +P W S++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 248 VLLKIAKSEPPTLAQPSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 24/161 (14%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK 119
H G+++RD+K +N L S + +K TD+G+ + ++PG G+ Y+APE+L+
Sbjct: 170 HERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR 226
Query: 120 RKS-GPESDVWSIGVITYILLCGRRPF---------WDKTEDGIFKEVLRNKPDFRRKPW 169
+ G D W++GV+ + ++ GR PF TED +F+ +L + R
Sbjct: 227 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 283
Query: 170 PSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 204
S+S A +K L KDP+ RL A HP+ R
Sbjct: 284 -SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 40/221 (18%)
Query: 7 RLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 66
+L GG +LD I+ +++ K E A ++R++L H +G +
Sbjct: 88 KLLSGGSVLD-IIKHIVAK--------GEHKSGVLDESTIATILREVLEGLEYLHKNGQI 138
Query: 67 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG------KKFQDIVGSAYYVAPEVLKR 120
HRD+K N L ED S++ DFG+S F+ G K + VG+ ++APEV+++
Sbjct: 139 HRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ 195
Query: 121 KSGPE--SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 178
G + +D+WS G+ L G P+ + L+N P PS+ +D
Sbjct: 196 VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP-------PSLETGVQD 248
Query: 179 -------------FVKKLLVKDPRARLTAAQALSHPWVREG 206
+ L KDP R TAA+ L H + ++
Sbjct: 249 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 50/208 (24%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+ +
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPE 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+G I ++C + F W+K + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK----VIEQL 241
Query: 158 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 183
P+F +K P++ ++ A+D + K+
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASE 211
LV D R++ +AL HP++ D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 19/173 (10%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
TE VV +Q L H + ++HRD+K N LF D +K DFG+S K +
Sbjct: 133 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVS--AKNTR 187
Query: 102 KFQ---DIVGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
Q +G+ Y++APEV+ R ++DVWS+G+ + P +
Sbjct: 188 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR 247
Query: 153 IFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ ++ +++P +P W S++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 248 VLLKIAKSEPPTLAQPSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 50/208 (24%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 134 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 190
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+G I ++C + F W+K + +++
Sbjct: 191 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK----VIEQL 246
Query: 158 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 183
P+F +K P++ ++ A+D + K+
Sbjct: 247 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 306
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASE 211
LV D R++ +AL HP++ D SE
Sbjct: 307 LVIDASKRISVDEALQHPYINVWYDPSE 334
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 24/161 (14%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK 119
H G+++RD+K +N L S + +K TD+G+ + ++PG G+ Y+APE+L+
Sbjct: 138 HERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 194
Query: 120 RKS-GPESDVWSIGVITYILLCGRRPF---------WDKTEDGIFKEVLRNKPDFRRKPW 169
+ G D W++GV+ + ++ GR PF TED +F+ +L + R
Sbjct: 195 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 251
Query: 170 PSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 204
S+S A +K L KDP+ RL A HP+ R
Sbjct: 252 -SMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFR 291
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 44/205 (21%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 127 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTASTNFMMTPY 183
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I L+ G F W+K + +
Sbjct: 184 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS 243
Query: 154 ------FKEVLRNKPDFRRKPWPSI---------------------SNSAKDFVKKLLVK 186
+ +RN + R +P I ++ A+D + K+LV
Sbjct: 244 AEFMAALQPTVRNYVE-NRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 302
Query: 187 DPRARLTAAQALSHPWVREGGDASE 211
DP R++ +AL HP++ D +E
Sbjct: 303 DPDKRISVDEALRHPYITVWYDPAE 327
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + DG
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGDGT 362
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 359
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 363 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 417
Query: 360 ---IDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 418 DEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 19/173 (10%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
TE VV +Q L H + ++HRD+K N LF D +K DFG+S K +
Sbjct: 133 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVS--AKNTR 187
Query: 102 KFQ---DIVGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
Q +G+ Y++APEV+ R ++DVWS+G+ + P +
Sbjct: 188 XIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR 247
Query: 153 IFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ ++ +++P +P W S++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 248 VLLKIAKSEPPTLAQPSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 90/154 (58%), Gaps = 12/154 (7%)
Query: 237 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 296
A+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D
Sbjct: 2 NAMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVD 60
Query: 297 CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTG 355
+ +G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T
Sbjct: 61 ADGNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTN 115
Query: 356 L-----KGSIDPLLEEADIDKDGRISLSEFRRLL 384
L +D ++ EADID DG+++ EF +++
Sbjct: 116 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 149
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 50 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQD 105
+ Q+LR H ++HRD+KP N L + + LK DFGL+ P +
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTE 186
Query: 106 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPFWDKTED--GIF-- 154
V + +Y APE++ G D+WS+G I +L R + + D+ GI
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
Query: 155 --------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQ 196
+ L + P + PW P+ + A D + K+L +P R+ Q
Sbjct: 247 PSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 306
Query: 197 ALSHPWVREGGDASEIPI 214
AL+HP++ + D S+ PI
Sbjct: 307 ALAHPYLEQYYDPSDEPI 324
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + + LK DFGL+
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARV 177
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 297
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 298 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + + LK DFGL+
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARV 177
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 297
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 298 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
DS LK DFGL + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DSELKILDFGLCRHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 50 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQD 105
+ Q+LR H ++HRD+KP N L + + LK DFGL+ P +
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTE 186
Query: 106 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPFWDKTED--GIF-- 154
V + +Y APE++ G D+WS+G I +L R + + D+ GI
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
Query: 155 --------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQ 196
+ L + P + PW P+ + A D + K+L +P R+ Q
Sbjct: 247 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 306
Query: 197 ALSHPWVREGGDASEIPI 214
AL+HP++ + D S+ PI
Sbjct: 307 ALAHPYLEQYYDPSDEPI 324
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + ++ L+ D+GL++F P +
Sbjct: 130 TDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQ 187
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-------- 151
++ V S Y+ PE+L + D+WS+G + ++ R PF+ ++
Sbjct: 188 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIA 247
Query: 152 ---------GIFKEV-LRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
G K+ + P F RK W + +S A D + KLL
Sbjct: 248 KVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLR 307
Query: 186 KDPRARLTAAQALSHPW 202
D + RLTA +A+ HP+
Sbjct: 308 YDHQQRLTAKEAMEHPY 324
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 125 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 181
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 182 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 241
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 242 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 301
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 302 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 332
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 173
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 234 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 293
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 294 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 324
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 50 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQD 105
+ Q+LR H ++HRD+KP N L + + LK DFGL+ P +
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHTGFLTE 186
Query: 106 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPFWDKTED--GIF-- 154
V + +Y APE++ G D+WS+G I +L R + + D+ GI
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
Query: 155 --------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQ 196
+ L + P + PW P+ + A D + K+L +P R+ Q
Sbjct: 247 PSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 306
Query: 197 ALSHPWVREGGDASEIPI 214
AL+HP++ + D S+ PI
Sbjct: 307 ALAHPYLEQYYDPSDEPI 324
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 101
T+ D + ++L+ CH G++HRD+KP N + ++ L+ D+GL++F P +
Sbjct: 135 TDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQ 192
Query: 102 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-------- 151
++ V S Y+ PE+L + D+WS+G + ++ R PF+ ++
Sbjct: 193 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIA 252
Query: 152 ---------GIFKEV-LRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 185
G K+ + P F RK W + +S A D + KLL
Sbjct: 253 KVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLR 312
Query: 186 KDPRARLTAAQALSHPW 202
D + RLTA +A+ HP+
Sbjct: 313 YDHQQRLTAKEAMEHPY 329
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 9/165 (5%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F ++++ + E A ++ H +V+RD+KPEN L S + TDF
Sbjct: 127 FYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS---QGHIVLTDF 183
Query: 92 GLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKT 149
GL + I+ G+ Y+APEVL ++ + D W +G + Y +L G PF+ +
Sbjct: 184 GLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 243
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA 194
++ +L NKP + P+I+NSA+ ++ LL KD RL A
Sbjct: 244 TAEMYDNIL-NKPLQLK---PNITNSARHLLEGLLQKDRTKRLGA 284
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 173
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 234 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 293
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 294 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 324
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 177
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 297
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 298 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 24/161 (14%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK 119
H G+++RD+K +N L S + +K TD+G+ + ++PG G+ Y+APE+L+
Sbjct: 123 HERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 179
Query: 120 RKS-GPESDVWSIGVITYILLCGRRPF---------WDKTEDGIFKEVLRNKPDFRRKPW 169
+ G D W++GV+ + ++ GR PF TED +F+ +L + R
Sbjct: 180 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 236
Query: 170 PSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 204
S+S A +K L KDP+ RL A HP+ R
Sbjct: 237 -SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 122 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 178
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 179 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 238
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 239 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 298
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 299 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 329
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 123 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 179
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 180 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 239
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 240 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 299
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 300 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 330
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 114 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 170
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 171 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 230
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 231 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 290
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 291 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 321
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 177
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 297
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 298 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 93/221 (42%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 166
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
DS LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 167 DSELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 284
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 325
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
L L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 358
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTG 355
DG +DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + G
Sbjct: 359 GDGTIDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 413
Query: 356 LKGS---IDPLLEEADIDKDGRISLSEFRRLL 384
K + +D ++ EADID DG+++ EF +++
Sbjct: 414 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 115 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 171
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 231
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 232 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 291
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 292 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 322
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 175
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 236 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 295
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 296 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 326
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 93/221 (42%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 162
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
DS LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 163 DSELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 280
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 321
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 115 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 171
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 231
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 232 LDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 291
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 292 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 322
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 50 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQD 105
+ Q+LR H ++HRD+KP N L + LK DFGL+ P +
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTE 190
Query: 106 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPFWDKTED--GIF-- 154
V + +Y APE++ G D+WS+G I +L R + + D+ GI
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
Query: 155 --------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQ 196
+ L + P + PW P+ + A D + K+L +P R+ Q
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 197 ALSHPWVREGGDASEIPI 214
AL+HP++ + D S+ PI
Sbjct: 311 ALAHPYLEQYYDPSDEPI 328
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 24/161 (14%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK 119
H G+++RD+K +N L S + +K TD+G+ + ++PG G+ Y+APE+L+
Sbjct: 127 HERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 183
Query: 120 RKS-GPESDVWSIGVITYILLCGRRPF---------WDKTEDGIFKEVLRNKPDFRRKPW 169
+ G D W++GV+ + ++ GR PF TED +F+ +L + R
Sbjct: 184 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 240
Query: 170 PSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 204
S+S A +K L KDP+ RL A HP+ R
Sbjct: 241 -SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 50/208 (24%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPY 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+G I ++ G F W+K + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 158 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 183
P+F +K P++ ++ A+D + K+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASE 211
LV D R++ +AL HP++ D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 137 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 193
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 194 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 254 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 313
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 314 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 344
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 34/208 (16%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
+ K + E +V QML+ H G++HRD+KP N + ED LK DFGL+
Sbjct: 119 LMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNL---AVNEDCELKILDFGLA 175
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
+ + V + +Y APEV+ + D+WS+G I ++ G+ F
Sbjct: 176 R--QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 233
Query: 153 IFKEVLR-----------------------NKPDFRRKPWPSISNSAK----DFVKKLLV 185
KE+++ P+ +K + SI +A + ++K+LV
Sbjct: 234 QLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLV 293
Query: 186 KDPRARLTAAQALSHPWVREGGDASEIP 213
D R+TA +AL+HP+ D + P
Sbjct: 294 LDAEQRVTAGEALAHPYFESLHDTEDEP 321
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 177
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 178 ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 297
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 298 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 28/205 (13%)
Query: 9 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVA-AECHL----- 62
CEGG+L ++ +T K+ +Y +++ + V L +A ECH
Sbjct: 89 CEGGDL---------ASVITKG-----TKERQYLDEEFVLRVMTQLTLALKECHRRSDGG 134
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRK 121
H ++HRD+KP N +F K++ +K DFGL+ + F + VG+ YY++PE + R
Sbjct: 135 HTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRM 191
Query: 122 SGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
S E SD+WS+G + Y L PF ++ + ++ K FRR P+ S+ + +
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDELNEII 248
Query: 181 KKLLVKDPRARLTAAQALSHPWVRE 205
++L R + + L +P + E
Sbjct: 249 TRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 122 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 178
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 179 ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 238
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 239 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 298
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 299 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 329
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 89/154 (57%), Gaps = 12/154 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGFISAAELRHVMTNLG 114
Query: 357 ----KGSIDPLLEEADIDKDGRISLSEFRRLLRT 386
+D ++ EADID DG+++ EF ++ T
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTT 148
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
L L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 358
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTG 355
DG +DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + G
Sbjct: 359 GDGTIDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 413
Query: 356 LKGS---IDPLLEEADIDKDGRISLSEFRRLL 384
K + +D ++ EADID DG+++ EF +++
Sbjct: 414 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 50/208 (24%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPY 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+G I ++ G F W+K + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 158 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 183
P+F +K P++ ++ A+D + K+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASE 211
LV D R++ +AL HP++ D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 42/196 (21%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPY 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 154 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 187
+ + N+P + +P + ++ A+D + K+LV D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 188 PRARLTAAQALSHPWV 203
P R++ AL HP++
Sbjct: 306 PAKRISVDDALQHPYI 321
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 50/208 (24%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D++LK DFGL+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPY 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+G I ++ G F W+K + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 158 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 183
P+F +K P++ ++ A+D + K+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASE 211
LV D R++ +AL HP++ D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 42/196 (21%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPY 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 153
V + YY APEV+ E+ D+WS+G I IL GR W+K + +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 154 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 187
+ + N+P + +P + ++ A+D + K+LV D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 188 PRARLTAAQALSHPWV 203
P R++ AL HP++
Sbjct: 306 PAKRISVDDALQHPYI 321
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 175
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L + P + PW P+ + A D + K+
Sbjct: 236 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 295
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+ QAL+HP++ + D S+ PI
Sbjct: 296 LTFNPHKRIEVEQALAHPYLAQYYDPSDEPI 326
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 44/205 (21%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFMMTPY 185
Query: 107 VGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------WDKTEDGI---- 153
V + YY APEV L D+WS+G I L+ G F W+K + +
Sbjct: 186 VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPS 245
Query: 154 ------FKEVLRNKPDFRRKPWPSI---------------------SNSAKDFVKKLLVK 186
+ +RN + R K +P I ++ A+D + K+LV
Sbjct: 246 AEFMAALQPTVRNYVENRPK-YPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 304
Query: 187 DPRARLTAAQALSHPWVREGGDASE 211
DP R++ +AL HP++ D +E
Sbjct: 305 DPDKRISVDEALRHPYITVWYDPAE 329
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + DG
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGDGT 354
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 359
+DF EF+ + ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 355 IDFPEFL--IMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 409
Query: 360 ---IDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 410 DEEVDEMIREADIDGDGQVNYEEFVQMM 437
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + DG
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGDGT 363
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 359
+DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 364 IDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 360 ---IDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 28/205 (13%)
Query: 9 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVA-AECHL----- 62
CEGG+L ++ +T K+ +Y +++ + V L +A ECH
Sbjct: 89 CEGGDL---------ASVITKG-----TKERQYLDEEFVLRVMTQLTLALKECHRRSDGG 134
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRK 121
H ++HRD+KP N +F K++ +K DFGL+ + F + VG+ YY++PE + R
Sbjct: 135 HTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 122 SGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
S E SD+WS+G + Y L PF ++ + ++ K FRR P+ S+ + +
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDELNEII 248
Query: 181 KKLLVKDPRARLTAAQALSHPWVRE 205
++L R + + L +P + E
Sbjct: 249 TRMLNLKDYHRPSVEEILENPLILE 273
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 174
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF +E++ + FR++
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQR-- 226
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 227 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 33/188 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q++ CH H ++HRD+KPEN L + +K DFG + PG+ + D V +
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENIL---VSQSGVVKLCDFGFARTLAAPGEVYDDEVATR 188
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF-WDKTEDGIF------------- 154
+Y APE+L K G DVW+IG + + G F D D ++
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRH 248
Query: 155 KEVLRNKPDF---------RRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 201
+E+ P F R+P +P +S D KK L DP R A+ L H
Sbjct: 249 QELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD 308
Query: 202 WVREGGDA 209
+ + G A
Sbjct: 309 FFQMDGFA 316
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 206
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF + E+ I +V FR++
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR-- 258
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 259 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--DFIKP 99
TE VV +Q L H + ++HRD+K N LF D +K DFG+S +
Sbjct: 106 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVSAKNTRTX 162
Query: 100 GKKFQDIVGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
++ +G+ Y++APEV+ R ++DVWS+G+ + P + +
Sbjct: 163 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 222
Query: 154 FKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
++ +++P +P W S++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 223 LLKIAKSEPPTLAQPSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 271
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 167
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 168 DCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 285
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 326
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+G I ++ G F W+K + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 158 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 183
P+F +K P++ ++ A+D + K+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASE 211
LV D R++ +AL HP++ D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+G I ++ G F W+K + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 158 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 183
P+F +K P++ ++ A+D + K+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASE 211
LV D R++ +AL HP++ D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 357 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 207
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF + E+ I +V FR++
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR-- 259
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 260 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 167
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 168 DCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 285
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 326
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 207
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF + E+ I +V FR++
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR-- 259
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 260 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 206
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF + E+ I +V FR++
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR-- 258
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + ++ L P R T + +HPW+++
Sbjct: 259 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 167
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 168 DCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 285
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 326
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 364
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 359
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 365 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 419
Query: 360 ---IDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 420 DEEVDEMIREADIDGDGQVNYEEFVQMM 447
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 359
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 364 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 360 ---IDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ +L +++E DSE+ + AF+ FD D +G I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--SLMARKMKEQDSEEELIE---AFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG I+ EF R++
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 359
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 364 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 360 ---IDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ +L +++E DSE+ + AF+ FD D +G I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--SLMARKMKEQDSEEELIE---AFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG I+ EF R++
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 90/153 (58%), Gaps = 12/153 (7%)
Query: 238 ALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC 297
++A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D
Sbjct: 1 SMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDA 59
Query: 298 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL 356
+ +G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 DGNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNL 114
Query: 357 -----KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 115 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 147
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 166
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 167 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 284
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 325
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 207
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF + E+ I +V FR++
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR-- 259
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S + ++ L P R T + +HPW+++
Sbjct: 260 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+G I ++ G F W+K + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 158 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 183
P+F +K P++ ++ A+D + K+
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASE 211
LV D R++ +AL HP++ D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 165
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 166 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 283
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 324
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
DG +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 DGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 206
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF + E+ I +V FR++
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR-- 258
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S + ++ L P R T + +HPW+++
Sbjct: 259 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 166
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 167 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 284
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 325
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 186
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+G I ++ G F W+K + +++
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 242
Query: 158 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 183
P+F +K P++ ++ A+D + K+
Sbjct: 243 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 302
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASE 211
LV D R++ +AL HP++ D SE
Sbjct: 303 LVIDASKRISVDEALQHPYINVWYDPSE 330
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+L CH G++HRD+K EN L + LK DFG +K + D G+
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 207
Query: 112 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 169
Y PE ++ R G + VWS+G++ Y ++CG PF + E+ I +V FR++
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR-- 259
Query: 170 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S + ++ L P R T + +HPW+++
Sbjct: 260 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L DE++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ L ++++ DSE+ + + AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--NLMARKMKDTDSEE---KLKEAFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EAD+D DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 183
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 184 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 242 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 301
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 302 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 342
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 357 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 162
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 163 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 280
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 321
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 183
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 184 DCELKILDFGLARHTD--DEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 242 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 301
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 302 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 342
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 167
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 168 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 285
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 326
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 357 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDQMIREADIDGDGQVNYEEFVQMM 146
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 89/154 (57%), Gaps = 12/154 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGFISAAELRHVMTNLG 114
Query: 357 ----KGSIDPLLEEADIDKDGRISLSEFRRLLRT 386
+D ++ EADID DG+++ EF ++ +
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 148
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 166
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 167 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 284
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 325
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 172
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 173 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 231 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 290
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 291 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 331
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 33/226 (14%)
Query: 11 GGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLV 66
G+ D + ++ + + A R ++ + ++++ Q+LR A H G+
Sbjct: 104 NGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGIC 163
Query: 67 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 126
HRD+KP+N L LK DFG + + G+ + S YY APE++ + +
Sbjct: 164 HRDIKPQNLLLDPP--SGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTT 221
Query: 127 --DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDF 164
D+WS G + L+ G+ F ++ E+++ P
Sbjct: 222 NIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQI 281
Query: 165 RRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
R P+ P A D + +LL P ARLTA +AL HP+ E
Sbjct: 282 RPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 171
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 172 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 230 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 289
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 290 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 330
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 180
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 181 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 239 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 298
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 299 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 339
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 172
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 173 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 231 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 290
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 291 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 331
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 172
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 173 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 231 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 290
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 291 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 331
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 157
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 158 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 216 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 275
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 276 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 316
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 162
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 163 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 280
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 321
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 179
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 180 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 238 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 297
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 298 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 338
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 326
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 359
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 327 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 381
Query: 360 ---IDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 382 DEEVDEMIREADIDGDGQVNYEEFVQMM 409
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K ++ T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 100 LVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 156
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 157 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 274
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 315
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 165
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 166 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 283
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 324
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 114 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 170
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 171 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 229 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 288
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 289 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 329
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 103 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 159
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 160 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 218 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 277
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 278 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 318
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 171
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 172 DXELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 230 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 289
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 290 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 330
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDFGLAR--HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 24/199 (12%)
Query: 211 EIPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLE 269
E+P + + NMR+F +L Q AL +AS L EE +L D F ID + +G + +
Sbjct: 24 ELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQ 83
Query: 270 EMRQALAK---------DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 320
E+ +K DLP ES V IL A D + +G +D+SEFV + L
Sbjct: 84 ELIDGYSKLSGEEVAVFDLPQI--ESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLS 141
Query: 321 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL----KGSIDPLLEEADIDKDGRIS 376
D + ++AF+KFD D +G I+ +EL GL + ++ D + DG +
Sbjct: 142 KD------KLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVD 195
Query: 377 LSEFRRLLRTASISSRNVP 395
EF ++++ + S N P
Sbjct: 196 FEEFCKMIQK--LCSNNEP 212
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 162
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 163 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 280
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 131 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMVPF 187
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+G I ++ G F W+K + +++
Sbjct: 188 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 243
Query: 158 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 183
P+F +K P++ ++ A+D + K+
Sbjct: 244 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 303
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASE 211
LV D R++ +AL HP++ D SE
Sbjct: 304 LVIDASKRISVDEALQHPYINVWYDPSE 331
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 156
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 157 DCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 274
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 315
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 357 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 357 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 180
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 181 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 239 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 298
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 299 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 339
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 329
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 359
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 330 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 384
Query: 360 ---IDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 385 DEEVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 165
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 166 DXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 283
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 324
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 165
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 166 DXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 283
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 324
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 157
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 158 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 216 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 275
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 276 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 316
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 179
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 180 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 238 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 297
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 298 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 338
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 329
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 359
+DF EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 330 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 384
Query: 360 ---IDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 385 DEEVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 102 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 158
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 159 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 217 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 276
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 277 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 317
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 204 RE 205
++
Sbjct: 288 QD 289
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 156
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 157 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 274
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 315
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 180
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 181 DCELKILDFGLARHTD--DEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 239 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 298
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 299 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 339
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 359
+DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 364 IDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 360 ---IDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 204 RE 205
++
Sbjct: 289 QD 290
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 26/184 (14%)
Query: 216 ISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQAL 275
I VL N + + + ++ A+ +A +D ++ L+ F +D D G I+ E++++ L
Sbjct: 19 IHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGL 78
Query: 276 AKD---LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQA 332
KD LP+ +L ID + G +D++EF+AA L QL S+K
Sbjct: 79 EKDGLKLPYNFDL-----LLDQIDSDGSGKIDYTEFIAAALDRKQL----SKKL---IYC 126
Query: 333 AFEKFDIDRDGFITPEELR--MHTG-LKGSIDP--------LLEEADIDKDGRISLSEFR 381
AF FD+D DG IT EL ++ G KG+I ++ + D + DG+I EF
Sbjct: 127 AFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFS 186
Query: 382 RLLR 385
+++
Sbjct: 187 EMMK 190
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 156
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 157 DCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 274
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 315
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 204 RE 205
++
Sbjct: 289 QD 290
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 204 RE 205
++
Sbjct: 291 QD 292
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KPEN L + + ++K DFGL+ F P + + V +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 230 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 204 RE 205
++
Sbjct: 290 QD 291
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 59/243 (24%)
Query: 13 ELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 72
EL+ L ++IST + S + + Q LR H ++HRD+KP
Sbjct: 94 ELMQTDLHRVISTQMLS-------------DDHIQYFIYQTLRAVKVLHGSNVIHRDLKP 140
Query: 73 ENFLFKSAKEDSSLKATDFGLSDFI--------KPGKK---FQDIVGSAYYVAPEVL--K 119
N L S + LK DFGL+ I +P + + V + +Y APEV+
Sbjct: 141 SNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTS 197
Query: 120 RKSGPESDVWSIGVITYILLCGRRPFWDKTED--------GIF----------------- 154
K DVWS G I L RRP + + GI
Sbjct: 198 AKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256
Query: 155 KEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 210
+E +++ P + P +P ++ D ++++LV DP R+TA +AL HP+++ D +
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 211 EIP 213
+ P
Sbjct: 317 DEP 319
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 204 RE 205
++
Sbjct: 288 QD 289
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF ++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 59/243 (24%)
Query: 13 ELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 72
EL+ L ++IST + S + + Q LR H ++HRD+KP
Sbjct: 94 ELMQTDLHRVISTQMLS-------------DDHIQYFIYQTLRAVKVLHGSNVIHRDLKP 140
Query: 73 ENFLFKSAKEDSSLKATDFGLSDFI--------KPGKK---FQDIVGSAYYVAPEVL--K 119
N L S + LK DFGL+ I +P + + V + +Y APEV+
Sbjct: 141 SNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTS 197
Query: 120 RKSGPESDVWSIGVITYILLCGRRPFWDKTED--------GIF----------------- 154
K DVWS G I L RRP + + GI
Sbjct: 198 AKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256
Query: 155 KEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 210
+E +++ P + P +P ++ D ++++LV DP R+TA +AL HP+++ D +
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 211 EIP 213
+ P
Sbjct: 317 DEP 319
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 88/153 (57%), Gaps = 12/153 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEFRRLLRT 386
+D ++ EADID DG+++ EF ++ +
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 147
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L DE++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ L ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EAD+D DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 47 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+ ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPE 185
Query: 107 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 157
V + YY APEV+ E+ D+WS+G I ++ G F W+K + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 158 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 183
P+F +K P++ ++ A+D + K+
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKM 301
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASE 211
LV D R++ +AL HP++ D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DF 96
D TE VV RQML H ++HRD+K N L + ++ DFG+S
Sbjct: 111 DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL---EGDIRLADFGVSAKN 167
Query: 97 IKPGKKFQDIVGSAYYVAPEVL---KRKSGP---ESDVWSIGVITYILLCGRRPFWDKTE 150
+K +K +G+ Y++APEV+ K P ++D+WS+G+ + P +
Sbjct: 168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 227
Query: 151 DGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ ++ ++ P P W S +DF+K L K+P R +AAQ L HP+V
Sbjct: 228 MRVLLKIAKSDPPTLLTPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 65
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 66 NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGE 120
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 121 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DF 96
D TE VV RQML H ++HRD+K N L + ++ DFG+S
Sbjct: 103 DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL---EGDIRLADFGVSAKN 159
Query: 97 IKPGKKFQDIVGSAYYVAPEVL---KRKSGP---ESDVWSIGVITYILLCGRRPFWDKTE 150
+K +K +G+ Y++APEV+ K P ++D+WS+G+ + P +
Sbjct: 160 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 219
Query: 151 DGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ ++ ++ P P W S +DF+K L K+P R +AAQ L HP+V
Sbjct: 220 MRVLLKIAKSDPPTLLTPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 359
+DF EF+ T+ +++ DSE+ + AF FD D +G+I+ ELR + G K +
Sbjct: 364 IDFPEFL--TMMARWMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 360 ---IDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 34/220 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 133 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 189
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DFGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 190 DCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
Query: 141 GRRPFWDKTEDGIFKEVLR-----------------------NKPDFRRKPWPSISNSAK 177
GR F ++++R + P ++ + + A
Sbjct: 248 GRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGAN 307
Query: 178 ----DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 213
D ++K+LV D R+TA++AL+HP+ + D + P
Sbjct: 308 PLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDPDDEP 347
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 174
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 235 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
Query: 204 RE 205
++
Sbjct: 295 QD 296
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 59/243 (24%)
Query: 13 ELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 72
EL+ L ++IST + S + + Q LR H ++HRD+KP
Sbjct: 94 ELMQTDLHRVISTQMLS-------------DDHIQYFIYQTLRAVKVLHGSNVIHRDLKP 140
Query: 73 ENFLFKSAKEDSSLKATDFGLSDFI--------KPGKK---FQDIVGSAYYVAPEVL--K 119
N L S + LK DFGL+ I +P + + V + +Y APEV+
Sbjct: 141 SNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTS 197
Query: 120 RKSGPESDVWSIGVITYILLCGRRPFWDKTED--------GIF----------------- 154
K DVWS G I L RRP + + GI
Sbjct: 198 AKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256
Query: 155 KEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 210
+E +++ P + P +P ++ D ++++LV DP R+TA +AL HP+++ D +
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 211 EIP 213
+ P
Sbjct: 317 DEP 319
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK D+GL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDYGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 45 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKF 103
+ + + Q+LR A CH ++HRD+KP+N L E LK DFGL+ P K +
Sbjct: 101 NVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTY 157
Query: 104 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 159
+ V + +Y P++L + + D+W +G I Y + GR F T + + R
Sbjct: 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL 217
Query: 160 --------------------NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAA 195
N P +R + P + + D + KLL + R R++A
Sbjct: 218 GTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAE 277
Query: 196 QALSHPWVREGGD 208
A+ HP+ G+
Sbjct: 278 DAMKHPFFLSLGE 290
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 204 RE 205
++
Sbjct: 288 QD 289
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 60
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 61 NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGE 115
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 116 XLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 115 XLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 204 RE 205
++
Sbjct: 287 QD 288
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 89/154 (57%), Gaps = 12/154 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGFISAAELRHVMTNLG 114
Query: 357 ----KGSIDPLLEEADIDKDGRISLSEFRRLLRT 386
+D ++ E+DID DG+++ EF ++ +
Sbjct: 115 EKLTDEEVDEMIRESDIDGDGQVNYEEFVTMMTS 148
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 230 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 204 RE 205
++
Sbjct: 290 QD 291
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ TTL A I K +++ +V Q+LR H G++HRD+KP N + E
Sbjct: 110 LVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV---AVNE 166
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
DS L+ DFGL+ + ++ V + +Y APE++ D+WS+G I LL
Sbjct: 167 DSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ 224
Query: 141 GRRPF-----------------------WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 177
G+ F K + +++ P +K SI A
Sbjct: 225 GKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGAN 284
Query: 178 ----DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 213
D + ++LV D R++AA+AL+H + + D + P
Sbjct: 285 PLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 9/185 (4%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
+ + T K A V+ + H +G++HRD+KP N + + +++K DFG++
Sbjct: 107 VHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIA 163
Query: 95 DFIKPG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKT 149
I + ++G+A Y++PE + S SDV+S+G + Y +L G PF +
Sbjct: 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGD 208
D + + +R P +S V K L K+P R A + VR G+
Sbjct: 224 PDSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283
Query: 209 ASEIP 213
E P
Sbjct: 284 PPEAP 288
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Query: 17 RILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 76
++ + + TL IR ++ + Q+ R H G+ HRD+KP+N L
Sbjct: 114 NVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL 173
Query: 77 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVI 134
S +D++LK DFG + + P + + S +Y APE++ + P D+WSIG +
Sbjct: 174 VNS--KDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCV 231
Query: 135 TYILLCGRRPFWDKTE-DGIFK-----------EVLRNKPDFRRKPWPSI---------- 172
L+ G+ F +T D + + +++R P + +P++
Sbjct: 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILP 291
Query: 173 ---SNSAKDFVKKLLVKDPRARLTAAQALSHPW 202
+ A D ++++L +P R+ +A++HP+
Sbjct: 292 EGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF 324
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 168
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 204 RE 205
++
Sbjct: 289 QD 290
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 204 RE 205
++
Sbjct: 288 QD 289
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 204 RE 205
++
Sbjct: 288 QD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 204 RE 205
++
Sbjct: 287 QD 288
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 204 RE 205
++
Sbjct: 291 QD 292
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 204 RE 205
++
Sbjct: 289 QD 290
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 166
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 204 RE 205
++
Sbjct: 287 QD 288
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 166
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 204 RE 205
++
Sbjct: 287 QD 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 204 RE 205
++
Sbjct: 288 QD 289
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 171
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 232 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
Query: 204 RE 205
++
Sbjct: 292 QD 293
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 204 RE 205
++
Sbjct: 287 QD 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 204 RE 205
++
Sbjct: 287 QD 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 204 RE 205
++
Sbjct: 288 QD 289
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 204 RE 205
++
Sbjct: 291 QD 292
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
+A L D+++++ ++ F D D +G I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 356
+G +DF EF+ L ++++ DSE+ + AF FD D++GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLG 114
Query: 357 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EAD+D DG+I+ EF +++
Sbjct: 115 EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 171
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 232 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
Query: 204 RE 205
++
Sbjct: 292 QD 293
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 204 RE 205
++
Sbjct: 288 QD 289
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 204 RE 205
++
Sbjct: 291 QD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 230 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 204 RE 205
++
Sbjct: 290 QD 291
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 204 RE 205
++
Sbjct: 289 QD 290
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 204 RE 205
++
Sbjct: 288 QD 289
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 204 RE 205
++
Sbjct: 291 QD 292
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 204 RE 205
++
Sbjct: 291 QD 292
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 85/148 (57%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L DE++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 59
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 356
+DF EF+ L ++++ DSE+ + AF FD D +GFI+ ELR + T L
Sbjct: 60 IDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLT 114
Query: 357 KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EAD+D DG+++ EF +++
Sbjct: 115 DEEVDEMIREADVDGDGQVNYEEFVQVM 142
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 230 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 204 RE 205
++
Sbjct: 290 QD 291
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ A CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 174
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 235 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
Query: 204 RE 205
++
Sbjct: 295 QD 296
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 60
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 356
+DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 61 IDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGEKLT 115
Query: 357 KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 116 DEEVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 12/146 (8%)
Query: 241 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 300
S L +E++A+ +D F D + G I+ E+ L + L E+ + +++ + N +
Sbjct: 2 SELTEEQIAEFKDAFVQFDKEGTGKIATRELG-TLMRTLGQNPTEAELQDLIAEAENNNN 60
Query: 301 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 357
G ++F+EF + Q+ E D+E+ +R AF+ FD D DGFI+P ELR ++ G K
Sbjct: 61 GQLNFTEFCG--IMAKQMRETDTEE-EMRE--AFKIFDRDGDGFISPAELRFVMINLGEK 115
Query: 358 GS---IDPLLEEADIDKDGRISLSEF 380
+ ID ++ EAD D DG I+ EF
Sbjct: 116 VTDEEIDEMIREADFDGDGMINYEEF 141
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 220 NNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDL 279
NN + ++ + + T +EE+ R+ F D D +G IS E+R + +L
Sbjct: 57 NNNNGQLNFTEFCGIMAKQMRETDTEEEM---REAFKIFDRDGDGFISPAELRFVMI-NL 112
Query: 280 PWKLKESRVLEILQAIDCNTDGLVDFSEFV 309
K+ + + E+++ D + DG++++ EFV
Sbjct: 113 GEKVTDEEIDEMIREADFDGDGMINYEEFV 142
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 59
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 356
+DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 IDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGEKLT 114
Query: 357 KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 115 DEEVDEMIREADIDGDGQVNYEEFVQMM 142
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN + + +K TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
GL+ +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ TTL A I K +++ +V Q+LR H G++HRD+KP N + E
Sbjct: 110 LVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV---AVNE 166
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
DS L+ DFGL+ + ++ V + +Y APE++ D+WS+G I LL
Sbjct: 167 DSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ 224
Query: 141 GRRPF-----------------------WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 177
G+ F K + +++ P +K SI A
Sbjct: 225 GKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGAN 284
Query: 178 ----DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 213
D + ++LV D R++AA+AL+H + + D + P
Sbjct: 285 PLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EA+ID DG+++ EF +++
Sbjct: 115 KLTDEEVDEMIREANIDGDGQVNYEEFVQMM 145
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 60
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 356
+DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 61 IDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGEKLT 115
Query: 357 KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 116 DEEVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 86/146 (58%), Gaps = 12/146 (8%)
Query: 245 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 304
+E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G +D
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 305 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-----KG 358
F EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 63 FPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 117
Query: 359 SIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 118 EVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 91/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK FGL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILGFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 61
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 356
+DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 62 IDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGEKLT 116
Query: 357 KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 117 DEEVDEMIREADIDGDGQVNYEEFVQMM 144
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I++ ++ E A ++ H G+++RD+K +N + S + +K DFG+
Sbjct: 111 IQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDS---EGHIKIADFGMC 167
Query: 95 -DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG 152
+ + G ++ G+ Y+APE++ + G D W+ GV+ Y +L G+ PF + ED
Sbjct: 168 KEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
Query: 153 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 195
+F+ ++ + + + S+S A K L+ K P RL
Sbjct: 228 LFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHPAKRLGCG 266
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ + CH H ++HRD+KP+N L + + ++K DFGL+ F P + + V +
Sbjct: 111 QLLQGLSFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 157
+Y APE+L + D+WS+G I ++ R F +E D +F+ EV
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 158 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ + PD++ K P + + + ++L DP R++A AL+HP+
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 204 RE 205
++
Sbjct: 288 QD 289
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 86/146 (58%), Gaps = 12/146 (8%)
Query: 245 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 304
+E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G +D
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 305 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-----KG 358
F EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 61 FPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 115
Query: 359 SIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EADID DG+++ EF +++
Sbjct: 116 EVDEMIREADIDGDGQVNYEEFVQMM 141
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 90/154 (58%), Gaps = 12/154 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++ D ++ F D D +G I++EE+ + + L E + +++ +D +
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVI-RSLDQNPTEEELQDMISEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 356
+G ++F EF+ +L ++++ D+E+ + AF+ FD D++G+I+ ELR ++ G
Sbjct: 60 NGTIEFDEFL--SLMAKKVKDTDAEE---ELKEAFKVFDKDQNGYISASELRHVMINLGE 114
Query: 357 K---GSIDPLLEEADIDKDGRISLSEFRRLLRTA 387
K ++ +++EAD+D DG+++ EF +++ T
Sbjct: 115 KLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 148
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 18/160 (11%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 97
+ R E+ A + +M+ H VHRD+KP+N L + ++ DFG +
Sbjct: 169 EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM---NGHIRLADFGSCLKL 225
Query: 98 KPGKKFQD--IVGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKT 149
Q VG+ Y++PE+L K + GPE D WS+GV Y +L G PF+ ++
Sbjct: 226 MEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285
Query: 150 EDGIFKEVLRNKPDFRRKPWPS----ISNSAKDFVKKLLV 185
+ +++ +K F+ +P+ +S +AKD +++L+
Sbjct: 286 LVETYGKIMNHKERFQ---FPTQVTDVSENAKDLIRRLIC 322
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L E ++ TDF
Sbjct: 116 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DEQGYIQVTDF 172
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 173 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 231 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 268
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
H +V+RD+KPEN L + ++ +D GL+ + G+ + VG+ Y+APEV+K
Sbjct: 303 HRERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN 359
Query: 121 KSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ S D W++G + Y ++ G+ PF + + +EV R + + S A+
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSL 419
Query: 180 VKKLLVKDPRARL-----TAAQALSHP 201
+LL KDP RL +A + HP
Sbjct: 420 CSQLLCKDPAERLGCRGGSAREVKEHP 446
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 91/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK DF L+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDFYLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 91/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK D GL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDAGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN + + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
GL+ +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
H +V+RD+KPEN L + ++ +D GL+ + G+ + VG+ Y+APEV+K
Sbjct: 303 HRERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN 359
Query: 121 KSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 179
+ S D W++G + Y ++ G+ PF + + +EV R + + S A+
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSL 419
Query: 180 VKKLLVKDPRARL-----TAAQALSHP 201
+LL KDP RL +A + HP
Sbjct: 420 CSQLLCKDPAERLGCRGGSAREVKEHP 446
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
+A L ++++++ ++ F D D +G I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 356
+G +DF EF+ L ++++ DSE+ + AF FD D++GFI+ ELR + T L
Sbjct: 60 GNGTIDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLG 114
Query: 357 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EAD+D DG+I+ EF +++
Sbjct: 115 EKLTDEEVDEMIREADVDGDGQINYDEFVKVM 146
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 36/194 (18%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP--- 99
E+ A + + Q+LR H ++HRD+KP N + ED LK DFGL+ + P
Sbjct: 119 EEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLARIMDPHYS 176
Query: 100 --GKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTEDGIFK 155
G + +V + +Y +P +L + D+W+ G I +L G+ F E +
Sbjct: 177 HKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ 235
Query: 156 EVLRNKPDFR----------------------RKP----WPSISNSAKDFVKKLLVKDPR 189
+L + P KP P IS A DF++++L P
Sbjct: 236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPM 295
Query: 190 ARLTAAQALSHPWV 203
RLTA +ALSHP++
Sbjct: 296 DRLTAEEALSHPYM 309
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN + + +K TDF
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDF 186
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 187 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 245 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 91/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK D GL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDGGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN + + +K TDF
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDF 186
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 187 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 245 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN + + +K TDF
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDF 186
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 187 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 245 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN + + +K TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 101
EK A +++ H G +HRD+KP+N L + LK DFG +K K
Sbjct: 172 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTC--MKMNKE 226
Query: 102 ---KFQDIVGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGI 153
+ VG+ Y++PEVLK + G E D WS+GV Y +L G PF+ + G
Sbjct: 227 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT 286
Query: 154 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
+ +++ +K IS AK+ + L D RL
Sbjct: 287 YSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRL 324
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 91/221 (41%), Gaps = 34/221 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ T L A I K + T+ ++ Q+LR H ++HRD+KP N + E
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNE 160
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D LK D GL+ + V + +Y APE++ D+WS+G I LL
Sbjct: 161 DCELKILDRGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 141 GRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPWPSISNS----- 175
GR F K +LR P + P + +N
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 176 --AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 214
A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + + + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 137 KSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTT---CDLKICDFGLARI 193
Query: 97 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 145
P + V + +Y APE++ G D+WS+G I +L R + +
Sbjct: 194 ADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
Query: 146 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 183
D+ GI + L++ P + W P + A D + ++
Sbjct: 254 LDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRM 313
Query: 184 LVKDPRARLTAAQALSHPWVREGGDASEIPI 214
L +P R+T +AL+HP++ + D ++ P+
Sbjct: 314 LTFNPNKRITVEEALAHPYLEQYYDPTDEPV 344
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 101
EK A +++ H G +HRD+KP+N L + LK DFG +K K
Sbjct: 172 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTC--MKMNKE 226
Query: 102 ---KFQDIVGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGI 153
+ VG+ Y++PEVLK + G E D WS+GV Y +L G PF+ + G
Sbjct: 227 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT 286
Query: 154 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
+ +++ +K IS AK+ + L D RL
Sbjct: 287 YSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRL 324
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 101
EK A +++ H G +HRD+KP+N L + LK DFG +K K
Sbjct: 167 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTC--MKMNKE 221
Query: 102 ---KFQDIVGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGI 153
+ VG+ Y++PEVLK + G E D WS+GV Y +L G PF+ + G
Sbjct: 222 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT 281
Query: 154 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 192
+ +++ +K IS AK+ + L D RL
Sbjct: 282 YSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRL 319
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 102
E + A V L+ A H H ++HRD+K N L E +K DFG + + P
Sbjct: 153 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANX 209
Query: 103 FQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKE 156
F VG+ Y++APEV+ + + + DVWS+G IT I L R+P F ++
Sbjct: 210 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHI 265
Query: 157 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
P + W S ++FV L K P+ R T+ L H +V
Sbjct: 266 AQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 122 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 178
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 179 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 237 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 274
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 102
E + A V L+ A H H ++HRD+K N L E +K DFG + + P
Sbjct: 114 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANX 170
Query: 103 FQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKE 156
F VG+ Y++APEV+ + + + DVWS+G IT I L R+P F ++
Sbjct: 171 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHI 226
Query: 157 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
P + W S ++FV L K P+ R T+ L H +V
Sbjct: 227 AQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 186
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 187 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 245 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 186
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 187 GFAKRVK-GRTWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 245 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 13/155 (8%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
+S L +E++A+ ++ F D D NGSIS E+ + + L E+ V +++ ID +
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDG 60
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 356
+ ++FSEF+A L QL+ +DSE+ L AF+ FD + DG I+ EL+ G
Sbjct: 61 NHQIEFSEFLA--LMSRQLKSNDSEQELLE---AFKVFDKNGDGLISAAELKHVLTSIGE 115
Query: 357 K---GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 388
K +D +L E D G I++ +F LL S
Sbjct: 116 KLTDAEVDDMLREVS-DGSGEINIQQFAALLSKGS 149
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 21/184 (11%)
Query: 217 SVLNNMRQFVKYSRLKQFALRALASTLDD-EELADLRDQFDAIDVDKNGSISLEEMRQAL 275
L NM++F +L Q A+ + S L EE +L F +D + +G + +E+ +
Sbjct: 7 GALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGY 66
Query: 276 AKDLPWKLK----------ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 325
K + WK E+ V ILQ++D + +G +++SEFV + L +
Sbjct: 67 RKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRE--- 123
Query: 326 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSID----PLLEEADIDKDGRISLSEFR 381
R AAF++FD D G IT EEL G+ D +L+E D + DG + EF
Sbjct: 124 ---RLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFV 180
Query: 382 RLLR 385
+++
Sbjct: 181 EMMQ 184
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 85/146 (58%), Gaps = 13/146 (8%)
Query: 245 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 304
+E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +G +D
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 305 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-----KG 358
F EF+ T+ ++++ DSE+ + AF FD D +G+I+ ELR + T L
Sbjct: 61 FPEFL--TMMARKMKDTDSEEI----REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 114
Query: 359 SIDPLLEEADIDKDGRISLSEFRRLL 384
+D ++ EA+ID DG+++ EF +++
Sbjct: 115 EVDEMIREANIDGDGQVNYEEFVQMM 140
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 186
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 187 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 245 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 186
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 187 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 245 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 186
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 187 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 245 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 150 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 206
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 207 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 265 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 302
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 115 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 171
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 172 GFAKRVK-GRTWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 230 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 267
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
+ + T K A V+ + H +G++HRD+KP N L + +++K DFG++
Sbjct: 107 VHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISAT---NAVKVVDFGIA 163
Query: 95 DFIKPG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKT 149
I + ++G+A Y++PE + S SDV+S+G + Y +L G PF +
Sbjct: 164 RAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGD 208
+ + +R P +S V K L K+P R A + VR G+
Sbjct: 224 PVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283
Query: 209 ASEIP 213
E P
Sbjct: 284 PPEAP 288
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 186
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 187 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 245 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 34/220 (15%)
Query: 23 ISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 82
+ TTL A I K +++ +V Q+LR H G++HRD+KP N + E
Sbjct: 102 LVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV---AVNE 158
Query: 83 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 140
D L+ DFGL+ + ++ V + +Y APE++ D+WS+G I LL
Sbjct: 159 DCELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ 216
Query: 141 GRRPF-----------------------WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 177
G+ F K + +++ P +K SI A
Sbjct: 217 GKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGAN 276
Query: 178 ----DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 213
D + ++LV D R++AA+AL+H + + D + P
Sbjct: 277 PLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 316
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R+ E A Q++ H L++RD+KPEN + + +K TDF
Sbjct: 130 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDF 186
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 187 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 245 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R+ E A Q++ H L++RD+KPEN + + +K TDF
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 102
E A + +M+ H VHRD+KP+N L + ++ DFG +
Sbjct: 174 EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV---NGHIRLADFGSCLKMNDDGT 230
Query: 103 FQD--IVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 154
Q VG+ Y++PE+L+ K GPE D WS+GV Y +L G PF+ ++ +
Sbjct: 231 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 290
Query: 155 KEVLRNKPDFRRKPWPS----ISNSAKDFVKKLLVKDPR 189
+++ ++ F+ +PS +S AKD +++L+ R
Sbjct: 291 GKIMNHEERFQ---FPSHVTDVSEEAKDLIQRLICSRER 326
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 150 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 206
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 207 GFAKRVKGAT--WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 265 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 302
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 102
E A + +M+ H VHRD+KP+N L + ++ DFG +
Sbjct: 190 EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV---NGHIRLADFGSCLKMNDDGT 246
Query: 103 FQD--IVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 154
Q VG+ Y++PE+L+ K GPE D WS+GV Y +L G PF+ ++ +
Sbjct: 247 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 306
Query: 155 KEVLRNKPDFRRKPWPS----ISNSAKDFVKKLLVKDPR 189
+++ ++ F+ +PS +S AKD +++L+ R
Sbjct: 307 GKIMNHEERFQ---FPSHVTDVSEEAKDLIQRLICSRER 342
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 16/188 (8%)
Query: 22 MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 81
+I L L + K E A ++R++L+ H +HRD+K N L
Sbjct: 94 IIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS--- 150
Query: 82 EDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILL 139
E +K DFG++ + + K VG+ +++APEV+K+ + ++D+WS+G+ L
Sbjct: 151 EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELA 210
Query: 140 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAA 195
G P D + + +N P P++ S K+FV+ L KDPR R TA
Sbjct: 211 KGEPPNSDLHPMRVLFLIPKNSP-------PTLEGQHSKPFKEFVEACLNKDPRFRPTAK 263
Query: 196 QALSHPWV 203
+ L H ++
Sbjct: 264 ELLKHKFI 271
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN + + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R+ E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R+ E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R+ E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 130 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 186
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 187 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 245 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R+ E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 122 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 178
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 179 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 237 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 274
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 29/179 (16%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+LR H H +VHRD+KP+N L S+ + +K DFGL+ +V + +
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLW 184
Query: 112 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEV--LRNKPDF 164
Y APEVL + S D+WS+G I + + R+P + + D G +V L + D+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 165 RR------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
R K I KD + K L +P R++A ALSHP+ ++
Sbjct: 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R+ E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R+ E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + +K DF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R+ E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R+ E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 150 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 206
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 207 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 265 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 302
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKD 187
I+++++ K F PS S+ KD ++ LL D
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVD 276
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + +K DF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R+ E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R+ E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 124 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 180
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 181 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 239 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 276
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + +K DF
Sbjct: 130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADF 186
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 187 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 245 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
+ + T K A V+ + H +G++HRD+KP N + + +++K DFG++
Sbjct: 107 VHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIA 163
Query: 95 DFIKPG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKT 149
I + ++G+A Y++PE + S SDV+S+G + Y +L G PF +
Sbjct: 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGD 208
+ + +R P +S V K L K+P R A + VR G+
Sbjct: 224 PVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283
Query: 209 ASEIP 213
E P
Sbjct: 284 PPEAP 288
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + +K DF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 32/180 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ CH ++HRD+KP+N L E LK DFGL+ F P + + V +
Sbjct: 109 QLLKGLGFCHSRNVLHRDLKPQNLLINRNGE---LKLADFGLARAFGIPVRCYSAEVVTL 165
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLR-------- 159
+Y P+VL + D+WS G I L RP + + D K + R
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEE 225
Query: 160 ------NKPDFRRKPW-----------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 202
PD++ P P ++ + +D ++ LL +P R++A +AL HP+
Sbjct: 226 QWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
+ + T K A V+ + H +G++HRD+KP N + + +++K DFG++
Sbjct: 107 VHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIA 163
Query: 95 DFIKPG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKT 149
I + ++G+A Y++PE + S SDV+S+G + Y +L G PF +
Sbjct: 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGD 208
+ + +R P +S V K L K+P R A + VR G+
Sbjct: 224 PVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283
Query: 209 ASEIP 213
E P
Sbjct: 284 PPEAP 288
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 29/179 (16%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+LR H H +VHRD+KP+N L S+ + +K DFGL+ +V + +
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLW 184
Query: 112 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEV--LRNKPDF 164
Y APEVL + S D+WS+G I + + R+P + + D G +V L + D+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 165 RR------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
R K I KD + K L +P R++A ALSHP+ ++
Sbjct: 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
+ + T K A V+ + H +G++HRD+KP N + + +++K DFG++
Sbjct: 107 VHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIA 163
Query: 95 DFIKPG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKT 149
I + ++G+A Y++PE + S SDV+S+G + Y +L G PF +
Sbjct: 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGD 208
+ + +R P +S V K L K+P R A + VR G+
Sbjct: 224 PVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283
Query: 209 ASEIP 213
E P
Sbjct: 284 PPEAP 288
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN + + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLII---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 86/153 (56%), Gaps = 14/153 (9%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ T+ ++++ + E +R AF FD D +GFI+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TMMARKMKDSEEE---IRE--AFRVFDKDGNGFISAAELRHVMTNLGE 112
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEFRRLLRT 386
+D ++ EADID DG+++ EF ++ +
Sbjct: 113 KLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 145
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 29/178 (16%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 111
Q+LR H H +VHRD+KP+N L S+ + +K DFGL+ +V + +
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLW 184
Query: 112 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEV--LRNKPDF 164
Y APEVL + S D+WS+G I + + R+P + + D G +V L + D+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 165 RR------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
R K I KD + K L +P R++A ALSHP+ +
Sbjct: 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I++ R+ E A ++ G+++RD+K +N + S + +K DFG+
Sbjct: 112 IQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS---EGHIKIADFGMC 168
Query: 95 -DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG 152
+ I G + G+ Y+APE++ + G D W+ GV+ Y +L G+ PF + ED
Sbjct: 169 KENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
Query: 153 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 195
+F+ ++ + + + S+S A K L+ K P RL
Sbjct: 229 LFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLGCG 267
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
I++ R+ E A ++ G+++RD+K +N + S + +K DFG+
Sbjct: 433 IQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS---EGHIKIADFGMC 489
Query: 95 -DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG 152
+ I G + G+ Y+APE++ + G D W+ GV+ Y +L G+ PF + ED
Sbjct: 490 KENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
Query: 153 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 195
+F+ ++ + + + S+S A K L+ K P RL
Sbjct: 550 LFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLGCG 588
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 214 IDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQ 273
IDI VL N + + R ++ A+ +A +D ++ L+ F +D + G+I+ ++R+
Sbjct: 20 IDIHVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRK 79
Query: 274 ALAKD---LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 330
L + LP +L ID + G +D++EF+AA + QL S+K
Sbjct: 80 GLERSGLMLPPNFDL-----LLDQIDSDGSGNIDYTEFLAAAIDRRQL----SKKL---I 127
Query: 331 QAAFEKFDIDRDGFITPEELRMHTGLKGS------------IDPLLEEADIDKDGRISLS 378
AF FD+D DG IT EL H G+ + ++ E D + DG+I
Sbjct: 128 YCAFRVFDVDNDGEITTAEL-AHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFY 186
Query: 379 EFRRLLR 385
EF +++
Sbjct: 187 EFSEMMK 193
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 101
E A ++R++L+ H +HRD+K N L E +K DFG++ + +
Sbjct: 123 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQI 179
Query: 102 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 160
K VG+ +++APEV+K+ + ++D+WS+G+ L G P + + + +N
Sbjct: 180 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 239
Query: 161 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
P + S K+FV+ L K+P R TA + L H ++
Sbjct: 240 NPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK 101
EK A +++ H GL+HRD+KP+N L + LK DFG + G
Sbjct: 173 EKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD---KHGHLKLADFGTCMKMDETGM 229
Query: 102 KFQDI-VGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFK 155
D VG+ Y++PEVLK + G E D WS+GV + +L G PF+ + G +
Sbjct: 230 VHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYS 289
Query: 156 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVRE 205
+++ +K IS AK+ + L D RL + HP+ +
Sbjct: 290 KIMDHKNSLCFPEDAEISKHAKNLICAFLT-DREVRLGRNGVEEIKQHPFFKN 341
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 121
H ++HRD+KP N L S E +K DFG+S + VG+ Y++PE L+
Sbjct: 143 HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTH 198
Query: 122 SGPESDVWSIGVITYILLCGRRPFWDKTED-GIFK--EVLRNKPDFRRKPWPSISNSAKD 178
+SD+WS+G+ + GR P + IF+ + + N+P + P S +D
Sbjct: 199 YSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPP-PKLPSGVFSLEFQD 257
Query: 179 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 212
FV K L+K+P R Q + H +++ DA E+
Sbjct: 258 FVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 290
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
+ S D +E+ L +F +D+D +GS+S+EE LP + V ++ D +
Sbjct: 10 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTD 64
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHT 354
+G VDF EF+ V Q ++ LR AF +D+D+DG+I+ E L+M
Sbjct: 65 GNGEVDFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMV 119
Query: 355 G-------LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 394
G L+ +D + AD D DGRIS EF ++ I + V
Sbjct: 120 GNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 166
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
+ S D +E+ L +F +D+D +GS+S+EE LP + V ++ D +
Sbjct: 11 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTD 65
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHT 354
+G VDF EF+ V Q ++ LR AF +D+D+DG+I+ E L+M
Sbjct: 66 GNGEVDFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMV 120
Query: 355 G-------LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 394
G L+ +D + AD D DGRIS EF ++ I + V
Sbjct: 121 GNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 167
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 101
E A ++R++L+ H +HRD+K N L E +K DFG++ + +
Sbjct: 118 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQI 174
Query: 102 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 160
K VG+ +++APEV+K+ + ++D+WS+G+ L G P + + + +N
Sbjct: 175 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 234
Query: 161 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
P + S K+FV+ L K+P R TA + L H ++
Sbjct: 235 NPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 101
E A ++R++L+ H +HRD+K N L E +K DFG++ + +
Sbjct: 103 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQI 159
Query: 102 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 160
K VG+ +++APEV+K+ + ++D+WS+G+ L G P + + + +N
Sbjct: 160 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 219
Query: 161 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
P + S K+FV+ L K+P R TA + L H ++
Sbjct: 220 NPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 37/200 (18%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 71
G + +RIL KM + + ++L + HG++HRD+K
Sbjct: 119 GPIPERILGKMTVAIVKALYYLKEK--------------------------HGVIHRDVK 152
Query: 72 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL------KRKSGPE 125
P N L E +K DFG+S + K G A Y+APE + K
Sbjct: 153 PSNILL---DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIR 209
Query: 126 SDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 184
+DVWS+G+ L G+ P+ + KT+ + +VL+ +P S + FVK L
Sbjct: 210 ADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHM-GFSGDFQSFVKDCL 268
Query: 185 VKDPRARLTAAQALSHPWVR 204
KD R R + L H +++
Sbjct: 269 TKDHRKRPKYNKLLEHSFIK 288
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ Y+AP ++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 33/225 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + + R SR + + V+ Q+ R A H G+ H
Sbjct: 86 GEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 146 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 203
Query: 127 -DVWSIGVITYILLCGRRPF-WDKTEDGIF----------KEVLRNK---------PDFR 165
DVWS G + LL G+ F D D + +E +R P +
Sbjct: 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIK 263
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
PW P A +LL P ARLT +A +H + E
Sbjct: 264 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 32/180 (17%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 110
Q+L+ CH ++HRD+KP+N L E LK +FGL+ F P + + V +
Sbjct: 109 QLLKGLGFCHSRNVLHRDLKPQNLLINRNGE---LKLANFGLARAFGIPVRCYSAEVVTL 165
Query: 111 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLR-------- 159
+Y P+VL + D+WS G I L RP + + D K + R
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEE 225
Query: 160 ------NKPDFRRKPW-----------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 202
PD++ P P ++ + +D ++ LL +P R++A +AL HP+
Sbjct: 226 QWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 101
E A ++R++L+ H +HRD+K N L E +K DFG++ + +
Sbjct: 103 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQI 159
Query: 102 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 160
K VG+ +++APEV+K+ + ++D+WS+G+ L G P + + + +N
Sbjct: 160 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 219
Query: 161 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
P + S K+FV+ L K+P R TA + L H ++
Sbjct: 220 NPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 88/232 (37%), Gaps = 70/232 (30%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------------- 94
VV Q+++V H GL+HRDMKP N L + + +K DFGLS
Sbjct: 114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNA---ECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 95 --------DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRP 144
+F D V + +Y APE+L K D+WS+G I +LCG+
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
Query: 145 F-----------------WDKTED---------GIFKEVLRNKPDFRR------------ 166
F + ED E L+ K + R+
Sbjct: 231 FPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKN 290
Query: 167 -----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 213
P + A D + KLL +P R++A AL HP+V + +E P
Sbjct: 291 LLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEP 342
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
+S L +E++A+ ++ F D D NGSIS E+ + + L E+ V +++ ID +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 356
+ ++FSEF+A L QL+ +DSE+ L AF+ FD + DG I+ EL+ G
Sbjct: 60 NHQIEFSEFLA--LMSRQLKSNDSEQELLE---AFKVFDKNGDGLISAAELKHVLTSIGE 114
Query: 357 K---GSIDPLLEEADIDKDGRISLSEFRRLL 384
K +D +L E D G I++ +F LL
Sbjct: 115 KLTDAEVDDMLREVS-DGSGEINIQQFAALL 144
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 35/199 (17%)
Query: 48 VVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 105
V + Q++R HL + HRD+KP N L A D +LK DFG + + P +
Sbjct: 133 VFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA--DGTLKLCDFGSAKKLSPSEPNVA 190
Query: 106 IVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NK 161
+ S YY APE++ + D+WS+G I ++ G F G E++R
Sbjct: 191 YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC 250
Query: 162 P--DFRRK----------------PWPSI--------SNSAKDFVKKLLVKDPRARLTAA 195
P + RK PW ++ + A D + LL P R+
Sbjct: 251 PSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPY 310
Query: 196 QALSHPWVREGGD-ASEIP 213
+AL HP+ E D A+++P
Sbjct: 311 EALCHPYFDELHDPATKLP 329
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
+ + T K A V+ + H +G++HRD+KP N + + +++K DFG++
Sbjct: 124 VHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIA 180
Query: 95 DFIKPG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKT 149
I + ++G+A Y++PE + S SDV+S+G + Y +L G PF +
Sbjct: 181 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 240
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 204
+ + +R P +S V K L K+P R A + VR
Sbjct: 241 PVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 295
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 51 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--IVG 108
Q+L H +VHRD+KP+N L S K +LK DFG++ + Q ++G
Sbjct: 118 NQILDGIKHAHDMRIVHRDIKPQNILIDSNK---TLKIFDFGIAKALSETSLTQTNHVLG 174
Query: 109 SAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGI-FKEVLRNKPDFRR 166
+ Y +PE K ++ E +D++SIG++ Y +L G PF +T I K + + P+
Sbjct: 175 TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTT 234
Query: 167 KPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 198
I S + + + KD R Q +
Sbjct: 235 DVRKDIPQSLSNVILRATEKDKANRYKTIQEM 266
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 121
H ++HRD+KP N L S E +K DFG+S + + + VG+ Y++PE L+
Sbjct: 127 HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQGTH 182
Query: 122 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK--EVLRNKPDFRRKPWPSISNSAKDF 179
+SD+WS+G+ + GR P + IF+ + + N+P + P S +DF
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFELLDYIVNEPP-PKLPSAVFSLEFQDF 238
Query: 180 VKKLLVKDPRARLTAAQALSHPWVREGGDASEI 212
V K L+K+P R Q + H +++ DA E+
Sbjct: 239 VNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 270
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 33/230 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 146 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 203
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDFR 165
DVWS G + LL G+ F + E+++ P +
Sbjct: 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 263
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 210
PW P A +LL P ARLT +A +H + E D +
Sbjct: 264 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 33/230 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 146 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 203
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDFR 165
DVWS G + LL G+ F + E+++ P +
Sbjct: 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 263
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 210
PW P A +LL P ARLT +A +H + E D +
Sbjct: 264 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 33/230 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 87 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 146
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 147 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 204
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDFR 165
DVWS G + LL G+ F + E+++ P +
Sbjct: 205 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 264
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 210
PW P A +LL P ARLT +A +H + E D +
Sbjct: 265 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 314
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 33/230 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 146 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 203
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDFR 165
DVWS G + LL G+ F + E+++ P +
Sbjct: 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 263
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 210
PW P A +LL P ARLT +A +H + E D +
Sbjct: 264 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 33/225 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 91 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 150
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 151 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 208
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDFR 165
DVWS G + LL G+ F + E+++ P +
Sbjct: 209 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 268
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
PW P A +LL P ARLT +A +H + E
Sbjct: 269 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 313
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 33/225 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 98 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 157
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 158 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 215
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDFR 165
DVWS G + LL G+ F + E+++ P +
Sbjct: 216 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 275
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
PW P A +LL P ARLT +A +H + E
Sbjct: 276 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 320
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 33/225 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 90 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 149
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 150 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 207
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDFR 165
DVWS G + LL G+ F + E+++ P +
Sbjct: 208 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 267
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
PW P A +LL P ARLT +A +H + E
Sbjct: 268 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 312
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 33/225 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 99 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 158
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 159 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 216
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDFR 165
DVWS G + LL G+ F + E+++ P +
Sbjct: 217 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 276
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
PW P A +LL P ARLT +A +H + E
Sbjct: 277 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 321
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 146 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 203
Query: 127 -DVWSIGVITYILLCGRRPF-WDKTEDGIF----------KEVLRNK---------PDFR 165
DVWS G + LL G+ F D D + +E +R P +
Sbjct: 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIK 263
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
PW P A +LL P ARLT +A +H + E
Sbjct: 264 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 33/230 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 146 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 203
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDFR 165
DVWS G + LL G+ F + E+++ P +
Sbjct: 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 263
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 210
PW P A +LL P ARLT +A +H + E D +
Sbjct: 264 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 48 VVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 106
+++ +L + H + HRD+KP N L ++ +K +DFG S+++ KK +
Sbjct: 155 CIIKSVLNSFSYIHNEKNICHRDVKPSNIL---MDKNGRVKLSDFGESEYM-VDKKIKGS 210
Query: 107 VGSAYYVAPEVLKRKS---GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-- 161
G+ ++ PE +S G + D+WS+G+ Y++ PF K +R K
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI 270
Query: 162 -----------PDFRRKPWPS---ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
P +K S +SN DF+K L K+P R+T+ AL H W+
Sbjct: 271 EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 33/225 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 98 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 157
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 158 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 215
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDFR 165
DVWS G + LL G+ F + E+++ P +
Sbjct: 216 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 275
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
PW P A +LL P ARLT +A +H + E
Sbjct: 276 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 320
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 33/225 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 114 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 173
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 174 RDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 231
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDFR 165
DVWS G + LL G+ F + E+++ P +
Sbjct: 232 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 291
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
PW P A +LL P ARLT +A +H + E
Sbjct: 292 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 336
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 33/230 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 94 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 153
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 154 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 211
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDFR 165
DVWS G + LL G+ F + E+++ P +
Sbjct: 212 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 271
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 210
PW P A +LL P ARLT +A +H + E D +
Sbjct: 272 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 321
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 33/230 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 105 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 164
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 165 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 222
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDFR 165
DVWS G + LL G+ F + E+++ P +
Sbjct: 223 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 282
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 210
PW P A +LL P ARLT +A +H + E D +
Sbjct: 283 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 332
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 120 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 179
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 180 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 237
Query: 127 -DVWSIGVITYILLCGRRPF-WDKTEDGIF----------KEVLRNK---------PDFR 165
DVWS G + LL G+ F D D + +E +R P +
Sbjct: 238 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 297
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
PW P A +LL P ARLT +A +H + E
Sbjct: 298 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 342
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 165 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 224
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 225 RDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 282
Query: 127 -DVWSIGVITYILLCGRRPF-WDKTEDGIF----------KEVLRNK---------PDFR 165
DVWS G + LL G+ F D D + +E +R P +
Sbjct: 283 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 342
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
PW P A +LL P ARLT +A +H + E
Sbjct: 343 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 387
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 122 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 181
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 182 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 239
Query: 127 -DVWSIGVITYILLCGRRPF-WDKTEDGIF----------KEVLRNK---------PDFR 165
DVWS G + LL G+ F D D + +E +R P +
Sbjct: 240 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 299
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
PW P A +LL P ARLT +A +H + E
Sbjct: 300 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 344
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 88/222 (39%), Gaps = 32/222 (14%)
Query: 1 MILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAEC 60
M++ + +C E+LD + K +F + Y
Sbjct: 85 MVMEYC-VCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYL------------------ 125
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQDIVGSAYYVAPEV 117
H G+VH+D+KP N L + +LK + G+++ + P + GS + PE+
Sbjct: 126 HSQGIVHKDIKPGNLLLTTG---GTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEI 182
Query: 118 ---LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 174
L SG + D+WS GV Y + G PF +F+ + + P +S
Sbjct: 183 ANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS- 241
Query: 175 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 216
D +K +L +P R + Q H W R+ +E P+ I
Sbjct: 242 ---DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPI 280
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 124 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 183
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 184 RDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 241
Query: 127 -DVWSIGVITYILLCGRRPF-WDKTEDGIF----------KEVLRNK---------PDFR 165
DVWS G + LL G+ F D D + +E +R P +
Sbjct: 242 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 301
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
PW P A +LL P ARLT +A +H + E
Sbjct: 302 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 346
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 33/225 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 120 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 179
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 180 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 237
Query: 127 -DVWSIGVITYILLCGRRPF-WDKTEDGIF----------KEVLRNK---------PDFR 165
DVWS G + LL G+ F D D + +E +R P +
Sbjct: 238 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 297
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
PW P A +LL P ARLT +A +H + E
Sbjct: 298 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 342
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 33/230 (14%)
Query: 12 GELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVH 67
GE D + ++ + + R SR + + V+ Q+ R A H G+ H
Sbjct: 86 GEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES- 126
RD+KP+N L + + LK DFG + + G+ + S YY APE++ + S
Sbjct: 146 RDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSS 203
Query: 127 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------NKPDFR 165
DVWS G + LL G+ F + E+++ P +
Sbjct: 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 263
Query: 166 RKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 210
PW P A +LL P ARLT +A +H + E D +
Sbjct: 264 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F +R+ R++E A Q++ H L++RD+KPEN L + ++ TDF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE 150
G + +K G+ + + G+ +APE++ K ++ D W++GV+ Y + G PF+
Sbjct: 186 GFAKRVK-GRTWX-LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 151 DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 192
I+++++ K F PS S+ KD ++ LL D R
Sbjct: 244 IQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSG 123
++HRD+KP N L + ++K DFG+S + K +D G Y+APE + +
Sbjct: 147 IIHRDIKPSNILLDRS---GNIKLCDFGISGQLVDSIAKTRD-AGCRPYMAPERIDPSAS 202
Query: 124 PE-----SDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 176
+ SDVWS+G+ Y L GR P+ W+ D + + V + P S S
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSF 262
Query: 177 KDFVKKLLVKDPRARLTAAQALSHPWV 203
+FV L KD R + L HP++
Sbjct: 263 INFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 7/155 (4%)
Query: 41 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 100
+ E A Q++ H +++RD+KPEN L +D +++ +D GL+ +K G
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAG 342
Query: 101 K-KFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 158
+ K + G+ ++APE+L + S D +++GV Y ++ R PF + E KE L
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE-L 401
Query: 159 RNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARL 192
+ + + +P S ++KDF + LL KDP RL
Sbjct: 402 KQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRL 436
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 32/166 (19%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL- 118
H H ++HRD+KP N L E+ LK DFGL+ F P + + V + +Y APE+L
Sbjct: 129 HQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 119 -KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-----GIFKEV----------LRNKP 162
R G D+W++G I LL R PF D IF+ + + + P
Sbjct: 186 GARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244
Query: 163 DFRR-KPWPSI---------SNSAKDFVKKLLVKDPRARLTAAQAL 198
D+ K +P I + D ++ L + +P AR+TA QAL
Sbjct: 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 290
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + + + +D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELG-TVXRSLGQNPTEAELQDXINEVDADG 60
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ T + ++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 61 NGTIDFPEFL--TXXARKXKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVXTNLGE 115
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEF 380
+D + EADID DG+++ EF
Sbjct: 116 KLTDEEVDQXIREADIDGDGQVNYEEF 142
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 7/155 (4%)
Query: 41 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 100
+ E A Q++ H +++RD+KPEN L +D +++ +D GL+ +K G
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAG 342
Query: 101 K-KFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 158
+ K + G+ ++APE+L + S D +++GV Y ++ R PF + E KE L
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE-L 401
Query: 159 RNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARL 192
+ + + +P S ++KDF + LL KDP RL
Sbjct: 402 KQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRL 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 7/155 (4%)
Query: 41 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 100
+ E A Q++ H +++RD+KPEN L +D +++ +D GL+ +K G
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAG 342
Query: 101 K-KFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 158
+ K + G+ ++APE+L + S D +++GV Y ++ R PF + E KE L
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE-L 401
Query: 159 RNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARL 192
+ + + +P S ++KDF + LL KDP RL
Sbjct: 402 KQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRL 436
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 7/155 (4%)
Query: 41 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 100
+ E A Q++ H +++RD+KPEN L +D +++ +D GL+ +K G
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAG 342
Query: 101 K-KFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 158
+ K + G+ ++APE+L + S D +++GV Y ++ R PF + E KE L
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE-L 401
Query: 159 RNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARL 192
+ + + +P S ++KDF + LL KDP RL
Sbjct: 402 KQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRL 436
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + + + +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELG-TVXRSLGQNPTEAELQDXINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G +DF EF+ T + ++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTIDFPEFL--TXXARKXKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVXTNLGE 114
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEF 380
+D + EADID DG+++ EF
Sbjct: 115 KLTDEEVDEXIREADIDGDGQVNYEEF 141
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 121
H ++HRD+KP N L S E +K DFG+S + VG+ Y++PE L+
Sbjct: 124 HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTH 179
Query: 122 SGPESDVWSIGVITYILLCGRRPFW--DKTED-----GIFK--EVLRNKPDFRRKPWPSI 172
+SD+WS+G+ + GR P D ED IF+ + + N+P + P
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPP-PKLPSGVF 238
Query: 173 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 212
S +DFV K L+K+P R Q + H +++ DA E+
Sbjct: 239 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 277
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 29/171 (16%)
Query: 6 TRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGL 65
T+ CEG L + A ++++ K + RQ R H +
Sbjct: 86 TQWCEGSSLYHHLHAS----------------ETKFEMKKLIDIARQTARGMDYLHAKSI 129
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYYVAPEVLKRK- 121
+HRD+K N ED+++K DFGL+ +F+ + GS ++APEV++ +
Sbjct: 130 IHRDLKSNNIFLH---EDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 122 SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRN--KPDFRR 166
S P +SDV++ G++ Y L+ G+ P+ + D I + V R PD +
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK 237
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 21/163 (12%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
+D +E+ L +F +D+D +GS+S+EE LP + V ++ D + +G
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTDGNGE 55
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHTG--- 355
VDF EF+ V Q ++ LR AF +D+D+DG+I+ E L+M G
Sbjct: 56 VDFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMVGNNL 110
Query: 356 ----LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 394
L+ +D + AD D DGRIS EF ++ I + V
Sbjct: 111 KDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 153
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF----------KSAKEDSSLKATDFG 92
E + ++RQ+ A H ++HRD+KP+N L ++ E+ + +DFG
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 93 LSDFIKPGK-----KFQDIVGSAYYVAPEVL----KRKSGPESDVWSIG-VITYILLCGR 142
L + G+ + G++ + APE+L KR+ D++S+G V YIL G+
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
Query: 143 RPFWDKT--EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 200
PF DK E I + + + + + S+ A D + +++ DP R TA + L H
Sbjct: 252 HPFGDKYSRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 310
Query: 201 P 201
P
Sbjct: 311 P 311
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF----------KSAKEDSSLKATDFG 92
E + ++RQ+ A H ++HRD+KP+N L ++ E+ + +DFG
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 93 LSDFIKPGK-----KFQDIVGSAYYVAPEVL----KRKSGPESDVWSIG-VITYILLCGR 142
L + G+ + G++ + APE+L KR+ D++S+G V YIL G+
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
Query: 143 RPFWDKT--EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 200
PF DK E I + + + + + S+ A D + +++ DP R TA + L H
Sbjct: 252 HPFGDKYSRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 310
Query: 201 P 201
P
Sbjct: 311 P 311
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 41 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 100
+ E A +++++L+ H +HRD+K N L E +K DFG++ +
Sbjct: 117 FDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDT 173
Query: 101 K-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 158
+ K VG+ +++APEV+++ + ++D+WS+G+ L G P D + +
Sbjct: 174 QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP 233
Query: 159 RNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+N P P++ + S K+F+ L KDP R TA + L H ++
Sbjct: 234 KNNP-------PTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 22/194 (11%)
Query: 14 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 73
++++ +S L S W KD+ E+ +Q+L H + +VHRD+K +
Sbjct: 83 FMEQVPGGSLSALLRSKW--GPLKDN---EQTIGFYTKQILEGLKYLHDNQIVHRDIKGD 137
Query: 74 NFLFKSAKEDSSLKATDFGLSD---FIKPGKKFQDIVGSAYYVAPEVL---KRKSGPESD 127
N L + LK +DFG S I P + G+ Y+APE++ R G +D
Sbjct: 138 NVLINTY--SGVLKISDFGTSKRLAGINPCT--ETFTGTLQYMAPEIIDKGPRGYGKAAD 193
Query: 128 VWSIGVITYILLCGRRPFWDKTED--GIFK-EVLRNKPDFRRKPWPSISNSAKDFVKKLL 184
+WS+G + G+ PF++ E +FK + + P+ S+S AK F+ K
Sbjct: 194 IWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE----SMSAEAKAFILKCF 249
Query: 185 VKDPRARLTAAQAL 198
DP R A L
Sbjct: 250 EPDPDKRACANDLL 263
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 22/194 (11%)
Query: 14 LLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 73
++++ +S L S W KD+ E+ +Q+L H + +VHRD+K +
Sbjct: 97 FMEQVPGGSLSALLRSKW--GPLKDN---EQTIGFYTKQILEGLKYLHDNQIVHRDIKGD 151
Query: 74 NFLFKSAKEDSSLKATDFGLSD---FIKPGKKFQDIVGSAYYVAPEVL---KRKSGPESD 127
N L + LK +DFG S I P + G+ Y+APE++ R G +D
Sbjct: 152 NVLINTY--SGVLKISDFGTSKRLAGINPCT--ETFTGTLQYMAPEIIDKGPRGYGKAAD 207
Query: 128 VWSIGVITYILLCGRRPFWDKTED--GIFK-EVLRNKPDFRRKPWPSISNSAKDFVKKLL 184
+WS+G + G+ PF++ E +FK + + P+ S+S AK F+ K
Sbjct: 208 IWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE----SMSAEAKAFILKCF 263
Query: 185 VKDPRARLTAAQAL 198
DP R A L
Sbjct: 264 EPDPDKRACANDLL 277
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 17/188 (9%)
Query: 32 FLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 91
F I + E + Q++ CH G+VHRD+K EN L + K DF
Sbjct: 127 FDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRR--GCAKLIDF 184
Query: 92 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKT 149
G + + + D G+ Y PE + R + VWS+G++ Y ++CG PF
Sbjct: 185 GSGALLH-DEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF---E 240
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 209
D +E+L + F +S +++ L P +R + + L PW++ A
Sbjct: 241 RD---QEILEAELHFPAH----VSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT--PA 291
Query: 210 SEIPIDIS 217
++P++ S
Sbjct: 292 EDVPLNPS 299
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 82/151 (54%), Gaps = 12/151 (7%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++ + ++ F D D +G I+ E+ + + L E+ + +++ ID +
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVM-RSLGQNPTEAELRDMMSEIDRDG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 356
+G VDF EF+ + ++++ D+E+ +R AF FD D +GF++ ELR G
Sbjct: 60 NGTVDFPEFLG--MMARKMKDTDNEE-EIRE--AFRVFDKDGNGFVSAAELRHVMTRLGE 114
Query: 357 KGS---IDPLLEEADIDKDGRISLSEFRRLL 384
K S +D ++ AD D DG+++ EF R+L
Sbjct: 115 KLSDEEVDEMIRAADTDGDGQVNYEEFVRVL 145
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 29/171 (16%)
Query: 6 TRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGL 65
T+ CEG L + A ++++ K + RQ R H +
Sbjct: 98 TQWCEGSSLYHHLHAS----------------ETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVLKRK- 121
+HRD+K N ED+++K DFGL+ +F+ + GS ++APEV++ +
Sbjct: 142 IHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 122 SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRN--KPDFRR 166
S P +SDV++ G++ Y L+ G+ P+ + D I + V R PD +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK 249
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
++ L +E++A+ ++ F D D +GSIS E+ + + L E+ V +++ ID +
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVM-RSLGLSPSEAEVADLMNEIDVD 59
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTG 355
+ ++FSEF+A L QL+ +DSE+ L AF+ FD + DG I+ EL+ G
Sbjct: 60 GNHAIEFSEFLA--LMSRQLKCNDSEQELLE---AFKVFDKNGDGLISAAELKHVLTSIG 114
Query: 356 LK---GSIDPLLEEADIDKDGRISLSEFRRLL 384
K +D +L E D G I++ +F LL
Sbjct: 115 EKLTDAEVDEMLREVS-DGSGEINIKQFAALL 145
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 29/171 (16%)
Query: 6 TRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGL 65
T+ CEG L + A ++++ K + RQ R H +
Sbjct: 98 TQWCEGSSLYHHLHAS----------------ETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVLKRK- 121
+HRD+K N ED+++K DFGL+ +F+ + GS ++APEV++ +
Sbjct: 142 IHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 122 SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRN--KPDFRR 166
S P +SDV++ G++ Y L+ G+ P+ + D I + V R PD +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK 249
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 244 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 303
D +E+ L +F +D+D +GS+S+EE LP + V ++ D + +G V
Sbjct: 1 DADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTDGNGEV 55
Query: 304 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHTG---- 355
DF EF+ V Q ++ LR AF +D+D+DG+I+ E L+M G
Sbjct: 56 DFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMVGNNLK 110
Query: 356 ---LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 394
L+ +D + AD D DGRIS EF ++ I + V
Sbjct: 111 DTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 152
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF----------KSAKEDSSLKATDFG 92
E + ++RQ+ A H ++HRD+KP+N L ++ E+ + +DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 93 LSDFIKPGK-----KFQDIVGSAYYVAPEVL--------KRKSGPESDVWSIG-VITYIL 138
L + G+ + G++ + APE+L KR+ D++S+G V YIL
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 139 LCGRRPFWDKT--EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 196
G+ PF DK E I + + + + + S+ A D + +++ DP R TA +
Sbjct: 234 SKGKHPFGDKYSRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK 292
Query: 197 ALSHP 201
L HP
Sbjct: 293 VLRHP 297
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF----------KSAKEDSSLKATDFG 92
E + ++RQ+ A H ++HRD+KP+N L ++ E+ + +DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 93 LSDFIKPGK-----KFQDIVGSAYYVAPEVL--------KRKSGPESDVWSIG-VITYIL 138
L + G+ + G++ + APE+L KR+ D++S+G V YIL
Sbjct: 174 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 139 LCGRRPFWDKT--EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 196
G+ PF DK E I + + + + + S+ A D + +++ DP R TA +
Sbjct: 234 SKGKHPFGDKYSRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK 292
Query: 197 ALSHP 201
L HP
Sbjct: 293 VLRHP 297
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 12/153 (7%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E+ ++R+ FD D D +G+I +E++ A+ + L ++ K+ + +++ ID + G
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAM-RALGFEPKKEEIKKMISEIDKDGSGT 80
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---- 358
+DF EF+ T+ ++ E DS + L+ AF FD D G IT ++LR G
Sbjct: 81 IDFEEFL--TMMTAKMGERDSREEILK---AFRLFDDDNSGTITIKDLRRVAKELGENLT 135
Query: 359 --SIDPLLEEADIDKDGRISLSEFRRLLRTASI 389
+ ++ EAD + D I EF R+++ S+
Sbjct: 136 EEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
++++ + E+ + + +++ ++HRDMKP+N L E + TDF ++
Sbjct: 106 LQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD---EHGHVHITDFNIA 162
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWDKTE 150
+ + + G+ Y+APE+ + G D WS+GV Y LL GRRP+ ++
Sbjct: 163 AMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS 222
Query: 151 DGIFKEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLT 193
KE++ + +PS S +KKLL +P R +
Sbjct: 223 TSS-KEIVHTF-ETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
H + ++HRD+KPEN + + + K D G + + G+ + VG+ Y+APE+L++
Sbjct: 139 HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ 198
Query: 121 KSGPES-DVWSIGVITYILLCGRRPF 145
K + D WS G + + + G RPF
Sbjct: 199 KKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
H + ++HRD+KPEN + + + K D G + + G+ + VG+ Y+APE+L++
Sbjct: 138 HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ 197
Query: 121 KSGPES-DVWSIGVITYILLCGRRPF 145
K + D WS G + + + G RPF
Sbjct: 198 KKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 12/147 (8%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + + + +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELG-TVXRSLGCNPTEAELQDXINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 356
+G ++F EF+ T ++ DSE+ +R AF FD D +G+I+ ELR + T L
Sbjct: 60 NGTINFPEFL--TXXARCXKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVXTNLGE 114
Query: 357 ---KGSIDPLLEEADIDKDGRISLSEF 380
+D + EADID DG+++ EF
Sbjct: 115 KLTDEEVDEXIREADIDGDGQVNYEEF 141
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 17/157 (10%)
Query: 217 SVLNNMRQFVKYSRLKQFALRALASTLD--DEELADLRDQFDAIDVDKNGSISLEEMRQA 274
+VLNNM+ ++K+S ++ + +A L + + + + F +D + NGS+S E+
Sbjct: 5 NVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTV 64
Query: 275 LAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF 334
LA +K+ + ILQA+D N G + ++EF+A +E +AAF
Sbjct: 65 LA---SVGIKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIES-------TFLKAAF 114
Query: 335 EKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDK 371
K D D DG+I+ ++ + D +L+ DID
Sbjct: 115 NKIDKDEDGYISKSDI-----VSLVHDKVLDNNDIDN 146
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
+S L +E++A+ ++ F D D NGSIS E+ + + L E+ V +++ ID +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR 351
+ ++FSEF+A L QL+ +DSE+ L AF+ FD + DG I+ EL+
Sbjct: 60 NHQIEFSEFLA--LMSRQLKSNDSEQELLE---AFKVFDKNGDGLISAAELK 106
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 333 AFEKFDIDRDGFITPEELRM---HTGL---KGSIDPLLEEADIDKDGRISLSEFRRLL 384
AF FD D +G I+ EL GL + ++ L+ E D+D + +I SEF L+
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 233 QFALRALAS---TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL 289
++ LR L+ +L EE+ +LR+ F D DK+G I+ ++ + + + + E ++
Sbjct: 6 KYPLRNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELI 64
Query: 290 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS-QAAFEKFDIDRDGFITPE 348
E+ Q I+ N G VDF +FV L +L ++ ++ + AF +FD + DG I+
Sbjct: 65 ELSQQINMNLGGHVDFDDFVE--LMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTS 122
Query: 349 ELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 384
ELR H I+ ++ + D++ DGR+ EF R++
Sbjct: 123 ELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 165
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 38/201 (18%)
Query: 40 RYTEKDAAVVVR-------QMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATD 90
+Y +K+ V +R Q++ CH +HRD+KP+N L A E LK D
Sbjct: 121 KYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGD 180
Query: 91 FGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWD 147
FGL+ F P ++F + + +Y PE+L R D+WSI I +L F
Sbjct: 181 FGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPG 240
Query: 148 KTE-DGIFK--EVL------------------RNKPDFRRKPWPSISNS-----AKDFVK 181
+E D +FK EVL ++ P FR K + + D +
Sbjct: 241 DSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLT 300
Query: 182 KLLVKDPRARLTAAQALSHPW 202
+L DP R++A AL HP+
Sbjct: 301 AMLEMDPVKRISAKNALEHPY 321
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 39 SRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
S++ E+ A + R +++ H G VHRD+KP+N L ++ DFG
Sbjct: 153 SKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRC---GHIRLADFGSC 209
Query: 95 DFIKPGKKFQDIV--GSAYYVAPEVLK--------RKSGPESDVWSIGVITYILLCGRRP 144
++ + +V G+ Y++PE+L+ GPE D W++GV Y + G+ P
Sbjct: 210 LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
Query: 145 FWDKTEDGIFKEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDPRARL---TAAQALSH 200
F+ + + +++ K + A+DF+++LL P RL A +H
Sbjct: 270 FYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLGRGGAGDFRTH 328
Query: 201 PW 202
P+
Sbjct: 329 PF 330
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 29/182 (15%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 108
++RQ LR H + +VHRD+KPEN L S ++K DFGL+ +V
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALDPVVV 173
Query: 109 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEV-LRNK 161
+ +Y APEVL + + D+WS+G I + + R+P + + IF + L +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 162 PDFRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
D+ R +P P + S + ++L +P R++A +AL H ++
Sbjct: 233 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
Query: 204 RE 205
+
Sbjct: 293 HK 294
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 237 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 296
+ +A L +EE+ L++ F ID D +G+I+ +E++ L + + +L ES + +++ A D
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR-VGSELMESEIKDLMDAAD 69
Query: 297 CNTDGLVDFSEFVAATLH 314
+ G +D+ EF+AAT+H
Sbjct: 70 IDKSGTIDYGEFIAATVH 87
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Query: 334 FEKFDIDRDGFITPEELRMHTGLK--GS------IDPLLEEADIDKDGRISLSEF 380
F+ D D G IT +EL+ GLK GS I L++ ADIDK G I EF
Sbjct: 29 FKMIDTDNSGTITFDELK--DGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 29/182 (15%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 108
++RQ LR H + +VHRD+KPEN L S ++K DFGL+ +V
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALAPVVV 173
Query: 109 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEV-LRNK 161
+ +Y APEVL + + D+WS+G I + + R+P + + IF + L +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 162 PDFRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
D+ R +P P + S + ++L +P R++A +AL H ++
Sbjct: 233 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
Query: 204 RE 205
+
Sbjct: 293 HK 294
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 29/182 (15%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 108
++RQ LR H + +VHRD+KPEN L S ++K DFGL+ +V
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALTPVVV 181
Query: 109 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEV-LRNK 161
+ +Y APEVL + + D+WS+G I + + R+P + + IF + L +
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240
Query: 162 PDFRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
D+ R +P P + S + ++L +P R++A +AL H ++
Sbjct: 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
Query: 204 RE 205
+
Sbjct: 301 HK 302
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 29/182 (15%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 108
++RQ LR H + +VHRD+KPEN L S ++K DFGL+ +V
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALFPVVV 173
Query: 109 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEV-LRNK 161
+ +Y APEVL + + D+WS+G I + + R+P + + IF + L +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 162 PDFRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
D+ R +P P + S + ++L +P R++A +AL H ++
Sbjct: 233 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
Query: 204 RE 205
+
Sbjct: 293 HK 294
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 241 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 300
S L +E +A+ + FD D D G IS++E+ + + L + + I++ +D +
Sbjct: 9 SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVM-RMLGQTPTKEELDAIIEEVDEDGS 67
Query: 301 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 358
G +DF EF+ + V Q++E K F FD + DG+I EEL G
Sbjct: 68 GTIDFEEFL--VMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEH 125
Query: 359 ----SIDPLLEEADIDKDGRISLSEFRRLLR 385
I+ L+++ D + DGRI EF +++
Sbjct: 126 VTDEEIESLMKDGDKNNDGRIDFDEFLKMME 156
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTG---L 356
+DF EF+ + V Q++E K F FD + DGFI EEL TG +
Sbjct: 73 IDFEEFL--VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVI 130
Query: 357 KGSIDPLLEEADIDKDGRISLSEFRRLLR 385
+ I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 246 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 305
EE+ +LR+ F D DK+G I+ ++ + + + + E ++E+ Q I+ N G VDF
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELSQQINMNLGGHVDF 66
Query: 306 SEFVAATLHVHQLEEHDSEKWHLRS-QAAFEKFDIDRDGFITPEELRM-------HTGLK 357
+FV L +L ++ ++ + AF +FD + DG I+ ELR H
Sbjct: 67 DDFVE--LMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGH 124
Query: 358 GSIDPLLEEADIDKDGRISLSEFRRLL 384
I+ ++ + D++ DGR+ EF R++
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 237 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 296
+ LA T D + +LRD F D + +G IS E+R+A+ L ++ + EI++ +D
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVD 135
Query: 297 CNTDGLVDFSEFV 309
N DG VDF EFV
Sbjct: 136 LNGDGRVDFEEFV 148
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 246 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 305
EE+ +LR+ F D DK+G I+ ++ + + + + E ++E+ Q I+ N G VDF
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELSQQINMNLGGHVDF 66
Query: 306 SEFVAATLHVHQLEEHDSEKWHLRS-QAAFEKFDIDRDGFITPEELRM-------HTGLK 357
+FV L +L ++ ++ + AF +FD + DG I+ ELR H
Sbjct: 67 DDFVE--LMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 124
Query: 358 GSIDPLLEEADIDKDGRISLSEFRRLL 384
I+ ++ + D++ DGR+ EF R++
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 237 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 296
+ LA T D + +LRD F D + +G IS E+R+A+ K L ++ + EI++ +D
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD 135
Query: 297 CNTDGLVDFSEFV 309
N DG VDF EFV
Sbjct: 136 LNGDGRVDFEEFV 148
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 37/196 (18%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--KPGKK---FQDI 106
Q+LR H ++HRD+KP N L E+ LK DFG++ + P + +
Sbjct: 166 QLLRGLKYMHSAQVIHRDLKPSNLL---VNENCELKIGDFGMARGLCTSPAEHQYFMTEY 222
Query: 107 VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKT--------------- 149
V + +Y APE++ + D+WS+G I +L R+ F K
Sbjct: 223 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTP 282
Query: 150 EDGIFKEV--------LRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQA 197
+ + V +++ P + PW P A + ++L +P AR++AA A
Sbjct: 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA 342
Query: 198 LSHPWVREGGDASEIP 213
L HP++ + D + P
Sbjct: 343 LRHPFLAKYHDPDDEP 358
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 83/153 (54%), Gaps = 12/153 (7%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E+ ++R+ FD D D +G+I +E++ A+ + L ++ K+ + +++ ID + G
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAM-RALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---- 358
+DF EF+ + ++ E DS + ++ AF FD D G I+ + L+ G
Sbjct: 61 IDFEEFLQ--MMTAKMGERDSREEIMK---AFRLFDDDETGKISFKNLKRVAKELGENMT 115
Query: 359 --SIDPLLEEADIDKDGRISLSEFRRLLRTASI 389
+ +++EAD D DG ++ EF R+++ S+
Sbjct: 116 DEELQEMIDEADRDGDGEVNEEEFFRIMKKTSL 148
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTG---L 356
+DF EF+ + V Q++E K + F FD + DGFI EEL TG
Sbjct: 73 IDFEEFL--VMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 357 KGSIDPLLEEADIDKDGRISLSEFRRLLR 385
+ I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 14/142 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAY---YVAPEVLK 119
VHRD+ N L S + K +DFGLS F++ + +G + APE +
Sbjct: 138 VHRDLAARNILVNS---NLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 120 -RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 177
RK SD WS G++ + ++ G RP+WD + + + + D+R P P S
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI---EQDYRLPPPPDCPTSLH 251
Query: 178 DFVKKLLVKDPRARLTAAQALS 199
+ KD AR Q +S
Sbjct: 252 QLMLDCWQKDRNARPRFPQVVS 273
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 241 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 300
S L +E +A+ + FD D D G IS++E+ + + L + + I++ +D +
Sbjct: 9 SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVM-RMLGQTPTKEELDAIIEEVDEDGS 67
Query: 301 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 358
G +DF EF+ + V Q++E K F FD + DG+I EEL G
Sbjct: 68 GTIDFEEFL--VMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEH 125
Query: 359 ----SIDPLLEEADIDKDGRISLSEFRRLLR 385
I+ L+++ D + DGRI EF +++
Sbjct: 126 VTDEEIESLMKDGDKNNDGRIDFDEFLKMME 156
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 37/196 (18%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--KPGKK---FQDI 106
Q+LR H ++HRD+KP N L E+ LK DFG++ + P + +
Sbjct: 167 QLLRGLKYMHSAQVIHRDLKPSNLL---VNENCELKIGDFGMARGLCTSPAEHQYFMTEY 223
Query: 107 VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKT--------------- 149
V + +Y APE++ + D+WS+G I +L R+ F K
Sbjct: 224 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTP 283
Query: 150 EDGIFKEV--------LRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQA 197
+ + V +++ P + PW P A + ++L +P AR++AA A
Sbjct: 284 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA 343
Query: 198 LSHPWVREGGDASEIP 213
L HP++ + D + P
Sbjct: 344 LRHPFLAKYHDPDDEP 359
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTG---L 356
+DF EF+ + V Q++E K F FD + DGFI EEL TG
Sbjct: 73 IDFEEFL--VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 357 KGSIDPLLEEADIDKDGRISLSEFRRLLR 385
+ I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 108/284 (38%), Gaps = 95/284 (33%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECH 61
+L F L E+ D L K+ T + FL TE+ ++ +L H
Sbjct: 99 LLKFDELYIVLEIADSDLKKLFKTPI----FL--------TEEHIKTILYNLLLGENFIH 146
Query: 62 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI----------------KPG----- 100
G++HRD+KP N L +D S+K DFGL+ I +PG
Sbjct: 147 ESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 101 --KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSIGVITYILL----------CGRRPFW 146
K+ V + +Y APE +L+ D+WS G I LL R P +
Sbjct: 204 LKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLF 263
Query: 147 ----------DKTEDGIFKEVLR---------------------NKPDF--------RRK 167
D+ + ++ R NKP+ RK
Sbjct: 264 PGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRK 323
Query: 168 P------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
P +PSIS+ + ++ +L +P R+T QAL HP++++
Sbjct: 324 PINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 48/217 (22%)
Query: 9 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 68
CE G L D I ++ ++ W L RQ+L + H G++HR
Sbjct: 97 CENGTLYDLIHSENLNQQRDEYWRL----------------FRQILEALSYIHSQGIIHR 140
Query: 69 DMKPENFLFKSAKEDSSLKATDFGLS-------DFIK------PGK--KFQDIVGSAYYV 113
D+KP N E ++K DFGL+ D +K PG +G+A YV
Sbjct: 141 DLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYV 197
Query: 114 APEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN-----KPDFRR 166
A EVL + D++S+G+I + ++ PF E + LR+ PDF
Sbjct: 198 ATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDD 254
Query: 167 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
K ++ L+ DP R A L+ W+
Sbjct: 255 NKM----KVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 69
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTG---L 356
+DF EF+ + V Q++E K F FD + DGFI EEL TG
Sbjct: 70 IDFEEFL--VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT 127
Query: 357 KGSIDPLLEEADIDKDGRISLSEFRRLLR 385
+ I+ L++++D + DGRI EF +++
Sbjct: 128 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 156
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 82/147 (55%), Gaps = 12/147 (8%)
Query: 245 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 304
+E+ ++R+ FD D D G+I ++E++ A+ + L ++ K+ + +++ ID G ++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAM-RALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 305 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 358
F +F+ T+ ++ E D+++ L+ AF+ FD D G I+ + L+ G
Sbjct: 61 FGDFL--TVMTQKMSEKDTKEEILK---AFKLFDDDETGKISFKNLKRVAKELGENLTDE 115
Query: 359 SIDPLLEEADIDKDGRISLSEFRRLLR 385
+ +++EAD D DG +S EF R+++
Sbjct: 116 ELQEMIDEADRDGDGEVSEQEFLRIMK 142
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTG---L 356
+DF EF+ + V Q++E K F FD + DGFI EEL TG
Sbjct: 73 IDFEEFL--VMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 357 KGSIDPLLEEADIDKDGRISLSEFRRLLR 385
+ I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL-KATDFGLSDFIKPGK 101
E + +V+R ++ +G+VHR++KP N + ++ S+ K TDFG + ++ +
Sbjct: 111 ESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170
Query: 102 KFQDIVGSAYYVAPEVLKR---------KSGPESDVWSIGVITYILLCGRRPF 145
+F + G+ Y+ P++ +R K G D+WSIGV Y G PF
Sbjct: 171 QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQD 105
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 136 IARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQ 192
Query: 106 IVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 145
+ GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 193 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQD 105
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQ 193
Query: 106 IVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 145
+ GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQD 105
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 106 IVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 145
+ GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 43 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL-KATDFGLSDFIKPGK 101
E + +V+R ++ +G+VHR++KP N + ++ S+ K TDFG + ++ +
Sbjct: 111 ESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170
Query: 102 KFQDIVGSAYYVAPEVLKR---------KSGPESDVWSIGVITYILLCGRRPF 145
+F + G+ Y+ P++ +R K G D+WSIGV Y G PF
Sbjct: 171 QFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQD 105
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 111 IARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQ 167
Query: 106 IVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 145
+ GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 168 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQD 105
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 106 IVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 145
+ GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQD 105
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 106 IVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 145
+ GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQD 105
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 106 IVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 145
+ GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 61 HLHGL--VHRDMKPENFLFKSAKEDSSLKA--TDFGLSDFIKPGK----KFQDIVGSAYY 112
HLH L VHRD+KP N L +KA +DFGL + G+ + + G+ +
Sbjct: 133 HLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 113 VAPEVLKR--KSGPES--DVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR-R 166
+APE+L K P D++S G + Y ++ G PF + +L
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ--ANILLGACSLDCL 250
Query: 167 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 202
P A++ ++K++ DP+ R +A L HP+
Sbjct: 251 HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPF 286
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 14/142 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS------AYYVAPEVLK 119
VHRD+ N L S + K +DFGLS F++ S + APE +
Sbjct: 140 VHRDLAARNILVNS---NLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 120 -RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 177
RK SD WS G++ + ++ G RP+WD + + + + D+R P P S
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI---EQDYRLPPPPDCPTSLH 253
Query: 178 DFVKKLLVKDPRARLTAAQALS 199
+ KD AR Q +S
Sbjct: 254 QLMLDCWQKDRNARPRFPQVVS 275
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 56 VAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 112
V A HLH ++HRD+KP N L + + +K DFG+S ++ G Y
Sbjct: 163 VKALEHLHSKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDSVAKTIDAGCKPY 219
Query: 113 VAPEVL-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPDFR 165
+APE + ++ +SD+WS+G+ L R P+ W + + V P
Sbjct: 220 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL- 278
Query: 166 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 202
P S DF + L K+ + R T + + HP+
Sbjct: 279 --PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 64 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVGS--AYYVAPEVLK 119
G VHRD+ N L S + K +DFGLS I+ P + G + APE ++
Sbjct: 165 GYVHRDLAARNILVNS---NLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 120 -RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 157
RK SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 261
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQD 105
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQ 193
Query: 106 IVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 145
+ GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQD 105
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 129 IARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQ 185
Query: 106 IVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 145
+ GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 186 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 56 VAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 112
V A HLH ++HRD+KP N L + + +K DFG+S ++ G Y
Sbjct: 119 VKALEHLHSKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDDVAKDIDAGCKPY 175
Query: 113 VAPEVL-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPDFR 165
+APE + ++ +SD+WS+G+ L R P+ W + + V P
Sbjct: 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL- 234
Query: 166 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 202
P S DF + L K+ + R T + + HP+
Sbjct: 235 --PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQD 105
+ RQ + H ++HRD+K N ED ++K DFGL+ +F+
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQ 165
Query: 106 IVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 145
+ GS ++APEV++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 21/169 (12%)
Query: 15 LDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQ---MLRVAAECHLH----GLVH 67
L+ ++ K + + + DS + D V Q MLR A + VH
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVH 158
Query: 68 RDMKPENFLFKSAKEDSSLKATDFGLSDFIK---PGKKFQDIVGSAY---YVAPEVLK-R 120
RD+ N L S + K +DFGLS F++ + +G + APE ++ R
Sbjct: 159 RDLAARNILVNS---NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 215
Query: 121 KSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 168
K SDVWS G++ + ++ G RP+WD T + + + D+R P
Sbjct: 216 KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI---EQDYRLPP 261
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 18/161 (11%)
Query: 50 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 109
+R L A H GLVH D+KP N K DFGL + + G
Sbjct: 163 LRDTLLALAHLHSQGLVHLDVKPANIFLGP---RGRCKLGDFGLLVELGTAGAGEVQEGD 219
Query: 110 AYYVAPEVLKRKSGPESDVWSIGVITYILLCGRR-----PFWDKTEDGIFKEVLRNKPDF 164
Y+APE+L+ G +DV+S+G+ + C W + G P+F
Sbjct: 220 PRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL------PPEF 273
Query: 165 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+S+ + + +L DP+ R TA L+ P +R+
Sbjct: 274 TA----GLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 27/152 (17%)
Query: 1 MILSFTRLCEGGELLDRILA-KMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAE 59
+++ F R G L+R+L+ K I + W + I + Y +A V +
Sbjct: 83 LVMEFAR----GGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPI--------- 129
Query: 60 CHLHGLVHRDMKPENFLFKSAKEDSSL-----KATDFGLSDFIKPGKKFQDIVGSAYYVA 114
+HRD+K N L E+ L K TDFGL+ K G+ ++A
Sbjct: 130 ------IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAYAWMA 182
Query: 115 PEVLKRKS-GPESDVWSIGVITYILLCGRRPF 145
PEV++ SDVWS GV+ + LL G PF
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 86/204 (42%), Gaps = 37/204 (18%)
Query: 9 CEGGELLDRILAK---MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGL 65
CEGG+L RI A+ + WF+ Q+ H +
Sbjct: 105 CEGGDLFKRINAQKGVLFQEDQILDWFV------------------QICLALKHVHDRKI 146
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKS-G 123
+HRD+K +N +D +++ DFG++ + + + +G+ YY++PE+ + K
Sbjct: 147 LHRDIKSQNIFLT---KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYN 203
Query: 124 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI----SNSAKDF 179
+SD+W++G + Y L + F + + +++ +P + S +
Sbjct: 204 NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-------FPPVSLHYSYDLRSL 256
Query: 180 VKKLLVKDPRARLTAAQALSHPWV 203
V +L ++PR R + L ++
Sbjct: 257 VSQLFKRNPRDRPSVNSILEKGFI 280
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------DFIK--- 98
+ RQ+L + H G++HRD+KP N E ++K DFGL+ D +K
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 99 ---PGK--KFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTED 151
PG +G+A YVA EVL + D++S+G+I + ++ PF E
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER 234
Query: 152 GIFKEVLRN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
+ LR+ PDF K ++ L+ DP R A L+ W+
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKM----KVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI-- 106
+ RQ + H ++HRDMK N E ++K DFGL+ Q +
Sbjct: 137 IARQTAQGMDYLHAKNIIHRDMKSNNIFLH---EGLTVKIGDFGLATVKSRWSGSQQVEQ 193
Query: 107 -VGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 145
GS ++APEV++ + + P +SDV+S G++ Y L+ G P+
Sbjct: 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 76/196 (38%), Gaps = 38/196 (19%)
Query: 40 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 99
++T + V++ +L H + ++HRDMK N L D LK DFGL+
Sbjct: 120 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSL 176
Query: 100 GK-----KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
K ++ + V + +Y PE+L +R GP D+W G I + TE
Sbjct: 177 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 236
Query: 153 IFKEVLRNKPDFRRKPWPSISN----------------------------SAKDFVKKLL 184
+ + + WP++ N A D + KLL
Sbjct: 237 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL 296
Query: 185 VKDPRARLTAAQALSH 200
V DP R+ + AL+H
Sbjct: 297 VLDPAQRIDSDDALNH 312
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 76/196 (38%), Gaps = 38/196 (19%)
Query: 40 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 99
++T + V++ +L H + ++HRDMK N L D LK DFGL+
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSL 177
Query: 100 GK-----KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
K ++ + V + +Y PE+L +R GP D+W G I + TE
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 237
Query: 153 IFKEVLRNKPDFRRKPWPSISN----------------------------SAKDFVKKLL 184
+ + + WP++ N A D + KLL
Sbjct: 238 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL 297
Query: 185 VKDPRARLTAAQALSH 200
V DP R+ + AL+H
Sbjct: 298 VLDPAQRIDSDDALNH 313
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 76/196 (38%), Gaps = 38/196 (19%)
Query: 40 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 99
++T + V++ +L H + ++HRDMK N L D LK DFGL+
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSL 177
Query: 100 GK-----KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
K ++ + V + +Y PE+L +R GP D+W G I + TE
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 237
Query: 153 IFKEVLRNKPDFRRKPWPSISN----------------------------SAKDFVKKLL 184
+ + + WP++ N A D + KLL
Sbjct: 238 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL 297
Query: 185 VKDPRARLTAAQALSH 200
V DP R+ + AL+H
Sbjct: 298 VLDPAQRIDSDDALNH 313
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 64 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK 119
G VHRD+ N L S + K +DFGLS ++ P + G + APE +
Sbjct: 144 GYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 200
Query: 120 -RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 157
RK SDVWS G++ + ++ G RP+W+ T + K V
Sbjct: 201 FRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAV 240
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 76/196 (38%), Gaps = 38/196 (19%)
Query: 40 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 99
++T + V++ +L H + ++HRDMK N L D LK DFGL+
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSL 177
Query: 100 GK-----KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 152
K ++ + V + +Y PE+L +R GP D+W G I + TE
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 237
Query: 153 IFKEVLRNKPDFRRKPWPSISN----------------------------SAKDFVKKLL 184
+ + + WP++ N A D + KLL
Sbjct: 238 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL 297
Query: 185 VKDPRARLTAAQALSH 200
V DP R+ + AL+H
Sbjct: 298 VLDPAQRIDSDDALNH 313
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 81/207 (39%), Gaps = 50/207 (24%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFL-FKSAKEDSSLKATDFGLSDF----IKPGKKF 103
++ Q+L H + ++HRD+KP N L E +K D G + +KP
Sbjct: 133 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 192
Query: 104 QDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR-------------RPFWDK 148
+V + +Y APE+L R D+W+IG I LL P+
Sbjct: 193 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 252
Query: 149 TEDGIFK----------EVLRNKP-------DFRRKPWPSIS-------------NSAKD 178
D IF E ++ P DFRR + + S + A
Sbjct: 253 QLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFH 312
Query: 179 FVKKLLVKDPRARLTAAQALSHPWVRE 205
++KLL DP R+T+ QA+ P+ E
Sbjct: 313 LLQKLLTMDPIKRITSEQAMQDPYFLE 339
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 64 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK 119
G VHRD+ N L S + K +DFGLS ++ P + G + APE +
Sbjct: 171 GYVHRDLAARNVLVDS---NLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 120 -RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 170
R SDVWS GV+ + +L G RP+W+ T ++V+ + + R P P
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN----RDVISSVEEGYRLPAP 276
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 56 VAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 112
V A HLH ++HRD+KP N L + + +K DFG+S ++ G Y
Sbjct: 146 VKALEHLHSKLSVIHRDVKPSNVLINALGQ---VKXCDFGISGYLVDDVAKDIDAGCKPY 202
Query: 113 VAPEVL-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPDFR 165
APE + ++ +SD+WS+G+ L R P+ W + + V P
Sbjct: 203 XAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQL- 261
Query: 166 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 202
P S DF + L K+ + R T + HP+
Sbjct: 262 --PADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPF 296
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK---PGKKFQDIVGSAY---YVAPEVLK 119
VHR + N L S + K +DFGLS F++ + +G + APE ++
Sbjct: 131 VHRALAARNILVNS---NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 120 -RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 168
RK SDVWS G++ + ++ G RP+WD T + + + D+R P
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI---EQDYRLPP 235
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 248 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 307
+ +LRD F D + +G IS E+R+A+ K L ++ + EI++ +D N DG VDF E
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 308 FV 309
FV
Sbjct: 66 FV 67
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 333 AFEKFDIDRDGFITPEELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 384
AF +FD + DG I+ ELR H I+ ++ + D++ DGR+ EF R++
Sbjct: 12 AFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 70
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 255 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATL 313
F +D + +GS+S EE++ ++ P +K ++L+ I +AID + +G +D +EF T
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRP--IKNEQLLQLIFKAIDIDGNGEIDLAEF---TK 60
Query: 314 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPLLEEADID 370
++E D + + ++ D D DG +T EE+ G + +D ++ +AD +
Sbjct: 61 FAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIM-KADAN 119
Query: 371 KDGRISLSEF 380
DG I+L EF
Sbjct: 120 GDGYITLEEF 129
Score = 30.4 bits (67), Expect = 1.7, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 226 VKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKE 285
+ + +FA L DE++ L+ + +D D +G ++ EE+ K
Sbjct: 53 IDLAEFTKFAAAVKEQDLSDEKVG-LKILYKLMDADGDGKLTKEEVTTFFKK-----FGY 106
Query: 286 SRVLEILQAIDCNTDGLVDFSEFVAATL 313
+V++ + D N DG + EF+A L
Sbjct: 107 EKVVDQIMKADANGDGYITLEEFLAFNL 134
Score = 30.4 bits (67), Expect = 2.1, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 330 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDP------LLEEADIDKDGRISLSEFRRL 383
++A F++ D + DG ++ EE++ K I + + DID +G I L+EF +
Sbjct: 2 AEALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKF 61
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 33/122 (27%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KF------------- 103
H G+VHRD+KP NFL+ + +L DFGL+ K KF
Sbjct: 134 HQFGIVHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELLKFVQSEAQQERCSQN 191
Query: 104 ---------QDI---VGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKT 149
Q + G+ + APEVL + + D+WS GVI LL GR PF+ +
Sbjct: 192 KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251
Query: 150 ED 151
+D
Sbjct: 252 DD 253
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 41 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 99
++E D +++ H +V+RD+KP N L E ++ +D GL+ DF K
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK- 344
Query: 100 GKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTED 151
KK VG+ Y+APEVL++ +S D +S+G + + LL G PF KT+D
Sbjct: 345 -KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 11/97 (11%)
Query: 61 HLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV 117
H+H +V+RD+KP N L E ++ +D GL+ DF K KK VG+ Y+APEV
Sbjct: 307 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEV 361
Query: 118 LKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTED 151
L++ +S D +S+G + + LL G PF KT+D
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 11/97 (11%)
Query: 61 HLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV 117
H+H +V+RD+KP N L E ++ +D GL+ DF K KK VG+ Y+APEV
Sbjct: 307 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEV 361
Query: 118 LKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTED 151
L++ +S D +S+G + + LL G PF KT+D
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 41 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 99
++E D +++ H +V+RD+KP N L E ++ +D GL+ DF K
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK- 343
Query: 100 GKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTED 151
KK VG+ Y+APEVL++ +S D +S+G + + LL G PF KT+D
Sbjct: 344 -KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 397
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD------IVGSAYYVA 114
H + +HRD+K N L A + K +DFGL+ + +KF IVG+ Y+A
Sbjct: 150 HENHHIHRDIKSANILLDEA---FTAKISDFGLA---RASEKFAQTVMXSRIVGTTAYMA 203
Query: 115 PEVLKRKSGPESDVWSIGVITYILLCG 141
PE L+ + P+SD++S GV+ ++ G
Sbjct: 204 PEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD------IVGSAYYVA 114
H + +HRD+K N L A + K +DFGL+ + +KF IVG+ Y+A
Sbjct: 150 HENHHIHRDIKSANILLDEA---FTAKISDFGLA---RASEKFAQTVMXXRIVGTTAYMA 203
Query: 115 PEVLKRKSGPESDVWSIGVITYILLCG 141
PE L+ + P+SD++S GV+ ++ G
Sbjct: 204 PEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD------IVGSAYYVA 114
H + +HRD+K N L A + K +DFGL+ + +KF IVG+ Y+A
Sbjct: 144 HENHHIHRDIKSANILLDEA---FTAKISDFGLA---RASEKFAQXVMXXRIVGTTAYMA 197
Query: 115 PEVLKRKSGPESDVWSIGVITYILLCG 141
PE L+ + P+SD++S GV+ ++ G
Sbjct: 198 PEALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 38 DSRYTEKDAAVVVRQ---MLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATD 90
DS + DA V Q MLR A + G VHRD+ N L S + K +D
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINS---NLVCKVSD 190
Query: 91 FGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 144
FGLS ++ P + G + +PE + RK SDVWS G++ + ++ G RP
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Query: 145 FWDKTEDGIFKEV 157
+W+ + + K V
Sbjct: 251 YWEMSNQDVIKAV 263
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 38 DSRYTEKDAAVVVRQ---MLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATD 90
DS + DA V Q MLR A + G VHRD+ N L S + K +D
Sbjct: 105 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSD 161
Query: 91 FGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 144
FGLS ++ P + G + +PE + RK SDVWS G++ + ++ G RP
Sbjct: 162 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
Query: 145 FWDKTEDGIFKEV 157
+W+ + + K V
Sbjct: 222 YWEMSNQDVIKAV 234
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 38 DSRYTEKDAAVVVRQ---MLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATD 90
DS + DA V Q MLR A + G VHRD+ N L S + K +D
Sbjct: 122 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSD 178
Query: 91 FGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 144
FGLS ++ P + G + +PE + RK SDVWS G++ + ++ G RP
Sbjct: 179 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
Query: 145 FWDKTEDGIFKEV 157
+W+ + + K V
Sbjct: 239 YWEMSNQDVIKAV 251
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 38 DSRYTEKDAAVVVRQ---MLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATD 90
DS + DA V Q MLR A + G VHRD+ N L S + K +D
Sbjct: 105 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSD 161
Query: 91 FGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 144
FGLS ++ P + G + +PE + RK SDVWS G++ + ++ G RP
Sbjct: 162 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
Query: 145 FWDKTEDGIFKEV 157
+W+ + + K V
Sbjct: 222 YWEMSNQDVIKAV 234
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 28/139 (20%)
Query: 38 DSRYTEKDAAVVVRQ---MLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATD 90
DS + DA V Q MLR A + G VHRD+ N L S + K +D
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSD 190
Query: 91 FGLSDFIKPGKKFQDIVGSAY----------YVAPEVLK-RKSGPESDVWSIGVITY-IL 138
FGL G+ +D +AY + +PE + RK SDVWS G++ + ++
Sbjct: 191 FGL------GRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 139 LCGRRPFWDKTEDGIFKEV 157
G RP+W+ + + K V
Sbjct: 245 SYGERPYWEMSNQDVIKAV 263
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 38 DSRYTEKDAAVVVRQ---MLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATD 90
DS + DA V Q MLR A + G VHRD+ N L S + K +D
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSD 190
Query: 91 FGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 144
FGLS ++ P + G + +PE + RK SDVWS G++ + ++ G RP
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Query: 145 FWDKTEDGIFKEV 157
+W+ + + K V
Sbjct: 251 YWEMSNQDVIKAV 263
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 38 DSRYTEKDAAVVVRQ---MLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATD 90
DS + DA V Q MLR A + G VHRD+ N L S + K +D
Sbjct: 132 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSD 188
Query: 91 FGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 144
FGLS ++ P + G + +PE + RK SDVWS G++ + ++ G RP
Sbjct: 189 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
Query: 145 FWDKTEDGIFKEV 157
+W+ + + K V
Sbjct: 249 YWEMSNQDVIKAV 261
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 38 DSRYTEKDAAVVVRQ---MLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATD 90
DS + DA V Q MLR A + G VHRD+ N L S + K +D
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSD 190
Query: 91 FGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 144
FGLS ++ P + G + +PE + RK SDVWS G++ + ++ G RP
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Query: 145 FWDKTEDGIFKEV 157
+W+ + + K V
Sbjct: 251 YWEMSNQDVIKAV 263
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 38 DSRYTEKDAAVVVRQ---MLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATD 90
DS + DA V Q MLR A + G VHRD+ N L S + K +D
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSD 190
Query: 91 FGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 144
FGLS ++ P + G + +PE + RK SDVWS G++ + ++ G RP
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Query: 145 FWDKTEDGIFKEV 157
+W+ + + K V
Sbjct: 251 YWEMSNQDVIKAV 263
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 49 VVRQMLRVAAEC----HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 104
+VR+ +C H + ++H D+KPEN L K + S +K DFG S + ++
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ-QGRSGIKVIDFGSSCY--EHQRVY 257
Query: 105 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCG 141
+ S +Y APEV L + G D+WS+G I LL G
Sbjct: 258 TXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 178 DFVKKLLVKDPRARLTAAQALSHPWVR 204
DF+K+ L DP R+T QAL HPW+R
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 38 DSRYTEKDAAVVVRQ---MLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATD 90
DS + DA V Q MLR A + G VHRD+ N L S + K +D
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSD 190
Query: 91 FGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 144
FGLS ++ P + G + +PE + RK SDVWS G++ + ++ G RP
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Query: 145 FWDKTEDGIFKEV 157
+W+ + + K V
Sbjct: 251 YWEMSNQDVIKAV 263
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 38 DSRYTEKDAAVVVRQ---MLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATD 90
DS + DA V Q MLR A + G VHRD+ N L S + K +D
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSD 190
Query: 91 FGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 144
FGLS ++ P + G + +PE + RK SDVWS G++ + ++ G RP
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Query: 145 FWDKTEDGIFKEV 157
+W+ + + K V
Sbjct: 251 YWEMSNQDVIKAV 263
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 49 VVRQMLRVAAEC----HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 104
+VR+ +C H + ++H D+KPEN L K + S +K DFG S + ++
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ-QGRSGIKVIDFGSSCY--EHQRVY 257
Query: 105 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCG 141
+ S +Y APEV L + G D+WS+G I LL G
Sbjct: 258 TXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 178 DFVKKLLVKDPRARLTAAQALSHPWVR 204
DF+K+ L DP R+T QAL HPW+R
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 38 DSRYTEKDAAVVVRQ---MLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATD 90
DS + DA V Q MLR A + G VHRD+ N L S + K +D
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINS---NLVCKVSD 190
Query: 91 FGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 144
FGLS ++ P + G + +PE + RK SDVWS G++ + ++ G RP
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Query: 145 FWDKTEDGIFKEV 157
+W+ + + K V
Sbjct: 251 YWEMSNQDVIKAV 263
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 49 VVRQMLRVAAEC----HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 104
+VR+ +C H + ++H D+KPEN L K + S +K DFG S + ++
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ-QGRSGIKVIDFGSSCYEH--QRVY 257
Query: 105 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCG 141
+ S +Y APEV L + G D+WS+G I LL G
Sbjct: 258 XXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 178 DFVKKLLVKDPRARLTAAQALSHPWVR 204
DF+K+ L DP R+T QAL HPW+R
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 20/147 (13%)
Query: 43 EKDAAVVVRQ---MLR--VAAECHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSD 95
EKD V Q MLR A +L + VHRD+ N L S + K +DFGLS
Sbjct: 139 EKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS---NLVCKVSDFGLSR 195
Query: 96 FIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 149
++ P + G + APE + RK SDVWS G++ + ++ G RP+W+ +
Sbjct: 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS 255
Query: 150 EDGIFKEVLRNKPDFRRKPWPSISNSA 176
EV++ D R P P SA
Sbjct: 256 N----HEVMKAINDGFRLPTPMDCPSA 278
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 48/192 (25%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 121
H ++HRD+KP N L S E +K DFG+S + VG+ Y++PE L+
Sbjct: 124 HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTH 179
Query: 122 SGPESDVWSIGVITYILLCGRRP------------FWDKTED------------------ 151
+SD+WS+G+ + GR P F + E
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 152 ---------GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 200
IF+ + + N+P + P S +DFV K L+K+P R Q + H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298
Query: 201 PWVREGGDASEI 212
+++ DA E+
Sbjct: 299 AFIKR-SDAEEV 309
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 48/192 (25%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 121
H ++HRD+KP N L S E +K DFG+S + VG+ Y++PE L+
Sbjct: 124 HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTH 179
Query: 122 SGPESDVWSIGVITYILLCGRRP------------FWDKTED------------------ 151
+SD+WS+G+ + GR P F + E
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 152 ---------GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 200
IF+ + + N+P + P S +DFV K L+K+P R Q + H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298
Query: 201 PWVREGGDASEI 212
+++ DA E+
Sbjct: 299 AFIKR-SDAEEV 309
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 48/192 (25%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 121
H ++HRD+KP N L S E +K DFG+S + VG+ Y++PE L+
Sbjct: 151 HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTH 206
Query: 122 SGPESDVWSIGVITYILLCGRRP------------FWDKTED------------------ 151
+SD+WS+G+ + GR P F + E
Sbjct: 207 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266
Query: 152 ---------GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 200
IF+ + + N+P + P S +DFV K L+K+P R Q + H
Sbjct: 267 FGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325
Query: 201 PWVREGGDASEI 212
+++ DA E+
Sbjct: 326 AFIKR-SDAEEV 336
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 48/192 (25%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 121
H ++HRD+KP N L S E +K DFG+S + VG+ Y++PE L+
Sbjct: 124 HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTH 179
Query: 122 SGPESDVWSIGVITYILLCGRRP------------FWDKTED------------------ 151
+SD+WS+G+ + GR P F + E
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 152 ---------GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 200
IF+ + + N+P + P S +DFV K L+K+P R Q + H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298
Query: 201 PWVREGGDASEI 212
+++ DA E+
Sbjct: 299 AFIKR-SDAEEV 309
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 61 HLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPE- 116
H+H ++HRD+KP N + +K D GL F +VG+ YY++PE
Sbjct: 151 HMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 207
Query: 117 VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFRRKPWPSISN 174
+ + +SD+WS+G + Y + + PF+ + + K++ + D+ P S
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI--EQCDYPPLPSDHYSE 265
Query: 175 SAKDFVKKLLVKDPRAR 191
+ V + DP R
Sbjct: 266 ELRQLVNMCINPDPEKR 282
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD------IVGSAYYVA 114
H + +HRD+K N L A + K +DFGL+ + +KF IVG+ Y A
Sbjct: 141 HENHHIHRDIKSANILLDEA---FTAKISDFGLA---RASEKFAQXVXXSRIVGTTAYXA 194
Query: 115 PEVLKRKSGPESDVWSIGVITYILLCG 141
PE L+ + P+SD++S GV+ ++ G
Sbjct: 195 PEALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 48/192 (25%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 121
H ++HRD+KP N L S E +K DFG+S + VG+ Y++PE L+
Sbjct: 124 HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTH 179
Query: 122 SGPESDVWSIGVITYILLCGRRP------------FWDKTED------------------ 151
+SD+WS+G+ + GR P F + E
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239
Query: 152 ---------GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 200
IF+ + + N+P + P S +DFV K L+K+P R Q + H
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298
Query: 201 PWVREGGDASEI 212
+++ DA E+
Sbjct: 299 AFIKR-SDAEEV 309
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 64 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK 119
G VHRD+ N L S + K +DFGLS ++ P G + APE +
Sbjct: 171 GYVHRDLAARNVLVDS---NLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA 227
Query: 120 -RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 170
R SDVWS GV+ + +L G RP+W+ T ++V+ + + R P P
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN----RDVISSVEEGYRLPAP 276
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 24/138 (17%)
Query: 263 NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 322
+G +S+EE ++ P+ + + D N DG +DF EF+ A + +
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQ 99
Query: 323 SEKWHLRSQAAFEKFDIDRDGFITPEEL--------RMHTGL----------KGSIDPLL 364
KW AF +D+D +G+I+ E+ +M + + + + +
Sbjct: 100 KLKW------AFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIF 153
Query: 365 EEADIDKDGRISLSEFRR 382
+ D ++DG++SL EF R
Sbjct: 154 RQMDTNRDGKLSLEEFIR 171
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 48/192 (25%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 121
H ++HRD+KP N L S E +K DFG+S + VG+ Y++PE L+
Sbjct: 186 HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTH 241
Query: 122 SGPESDVWSIGVITYILLCGRRP------------FWDKTED------------------ 151
+SD+WS+G+ + GR P F + E
Sbjct: 242 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 301
Query: 152 ---------GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 200
IF+ + + N+P + P S +DFV K L+K+P R Q + H
Sbjct: 302 YGMDSRPPMAIFELLDYIVNEPP-PKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVH 360
Query: 201 PWVREGGDASEI 212
+++ DA E+
Sbjct: 361 AFIKR-SDAEEV 371
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 121
H ++HRD+KP N L S E +K DFG+S + VG+ Y+APE L+
Sbjct: 134 HQIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMAPERLQGTH 189
Query: 122 SGPESDVWSIGVITYILLCGRRPF 145
+SD+WS+G+ L GR P
Sbjct: 190 YSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 46 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 105
A + Q+ + H L+HRD+KP N K+ +K DFGL +K K
Sbjct: 138 ALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKNDGKRTR 194
Query: 106 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL--CG----RRPFWDKTEDGIFKEVL 158
G+ Y++PE + + G E D++++G+I LL C F+ DGI ++
Sbjct: 195 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF 254
Query: 159 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 198
K K ++KLL K P R ++ L
Sbjct: 255 DKKE--------------KTLLQKLLSKKPEDRPNTSEIL 280
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 38 DSRYTEKDAAVVVRQ---MLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATD 90
DS + DA V Q MLR A + G VHRD+ N L S + K +D
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSD 190
Query: 91 FGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 144
FGL+ ++ P + G + +PE + RK SDVWS G++ + ++ G RP
Sbjct: 191 FGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Query: 145 FWDKTEDGIFKEV 157
+W+ + + K V
Sbjct: 251 YWEMSNQDVIKAV 263
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 48/217 (22%)
Query: 9 CEGGELLDRILAKMISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 68
CE L D I ++ ++ W L RQ+L + H G++HR
Sbjct: 97 CENRTLYDLIHSENLNQQRDEYWRL----------------FRQILEALSYIHSQGIIHR 140
Query: 69 DMKPENFLFKSAKEDSSLKATDFGLS-------DFIK------PGK--KFQDIVGSAYYV 113
++KP N E ++K DFGL+ D +K PG +G+A YV
Sbjct: 141 NLKPXNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYV 197
Query: 114 APEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN-----KPDFRR 166
A EVL + D +S+G+I + + PF E + LR+ PDF
Sbjct: 198 ATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLRSVSIEFPPDFDD 254
Query: 167 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 203
K ++ L+ DP R A L+ W+
Sbjct: 255 NK----XKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-R 120
VHRD+ N L S + K +DFG+S ++ P + G + APE + R
Sbjct: 138 VHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 194
Query: 121 KSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 157
K SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 195 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
+++ E A + Q L H ++H D+K +N L S ++L DFG +
Sbjct: 157 VKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAAL--CDFGHA 214
Query: 95 DFIKPGKKFQDIV------GSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWD 147
++P +D++ G+ ++APE VL R + DVWS + +L G P+
Sbjct: 215 VCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQ 274
Query: 148 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 196
+ ++ P R P PS + +++ L K+P R++AA+
Sbjct: 275 FFRGPLCLKIASEPPPVREIP-PSCAPLTAQAIQEGLRKEPIHRVSAAE 322
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-R 120
VHRD+ N L S + K +DFG+S ++ P + G + APE + R
Sbjct: 132 VHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 188
Query: 121 KSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 157
K SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 189 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-R 120
VHRD+ N L S + K +DFG+S ++ P + G + APE + R
Sbjct: 153 VHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 209
Query: 121 KSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 157
K SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 210 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 64 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSG 123
L+HRD+KP N L + + LK DFG + I+ + GSA ++APEV + +
Sbjct: 125 ALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSNY 180
Query: 124 PE-SDVWSIGVITYILLCGRRPF 145
E DV+S G+I + ++ R+PF
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPF 203
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 64 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSG 123
L+HRD+KP N L + + LK DFG + I+ + GSA ++APEV + +
Sbjct: 126 ALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSNY 181
Query: 124 PE-SDVWSIGVITYILLCGRRPF 145
E DV+S G+I + ++ R+PF
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPF 204
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 40 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK--SAKEDSSLKATDFGLSDFI 97
+++ K A+ +QML H LV+RD+KP+NFL ++K + + DFG+ F
Sbjct: 101 KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 160
Query: 98 K--------PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRP 144
+ P ++ +++ G+A Y++ L R+ D+ ++G + L G P
Sbjct: 161 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP 216
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 40 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK--SAKEDSSLKATDFGLSDFI 97
+++ K A+ +QML H LV+RD+KP+NFL ++K + + DFG+ F
Sbjct: 102 KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161
Query: 98 K--------PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRP 144
+ P ++ +++ G+A Y++ L R+ D+ ++G + L G P
Sbjct: 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP 217
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 10/169 (5%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
+++ E A + Q L H ++H D+K +N L S ++L DFG +
Sbjct: 176 VKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAAL--CDFGHA 233
Query: 95 DFIKP---GKKFQD---IVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWD 147
++P GK I G+ ++APE VL R + DVWS + +L G P+
Sbjct: 234 VCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQ 293
Query: 148 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 196
+ ++ P R P PS + +++ L K+P R++AA+
Sbjct: 294 FFRGPLCLKIASEPPPVREIP-PSCAPLTAQAIQEGLRKEPIHRVSAAE 341
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 331 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 384
Q AF FD D DG IT +ELR G +D ++ EAD+D+DGR++ EF R+L
Sbjct: 9 QVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARML 68
Score = 37.0 bits (84), Expect = 0.019, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 248 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 307
L DL+ F A D D +G I+++E+R+A+A L L + + +++ D + DG V++ E
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMA-GLGQPLPQEELDAMIREADVDQDGRVNYEE 63
Query: 308 F 308
F
Sbjct: 64 F 64
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 63/210 (30%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLFKSA-----------KEDSSLKAT-----DFGLSD 95
Q+ + H + L H D+KPEN LF ++ +++ S+K+T DFG +
Sbjct: 145 QLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSAT 204
Query: 96 FIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG-- 152
F + IV + +Y APEV L+ DVWSIG I + G F +T D
Sbjct: 205 F--DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLF--QTHDNRE 260
Query: 153 ---------------IFKEVLRNKPDFR-RKPWPSISNSAK------------------- 177
+ ++ + K +R R W +++ +
Sbjct: 261 HLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEE 320
Query: 178 -----DFVKKLLVKDPRARLTAAQALSHPW 202
D ++ +L +P RLT +AL HP+
Sbjct: 321 HHQLFDLIESMLEYEPAKRLTLGEALQHPF 350
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 262 KNGSISLEE----MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 317
++GSIS +E MR P +L+E ++ +D + G VDF EF+ + V
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQE-----MIDEVDEDGSGTVDFDEFLV--MMVRS 84
Query: 318 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK 371
+++ K F FD + DG+I EEL++ G I+ L+++ D +
Sbjct: 85 MKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 372 DGRISLSEFRRLLR 385
DGRI EF ++
Sbjct: 145 DGRIDYDEFLEFMK 158
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 245 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 304
+EEL+DL F D + +G I LEE++ L + E + E+++ D N DG +D
Sbjct: 94 EEELSDL---FRMFDKNADGYIDLEELKIMLQA-TGETITEDDIEELMKDGDKNNDGRID 149
Query: 305 FSEFV 309
+ EF+
Sbjct: 150 YDEFL 154
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 262 KNGSISLEE----MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 317
++GSIS +E MR P +L+E ++ +D + G VDF EF+ + V
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQE-----MIDEVDEDGSGTVDFDEFLV--MMVRS 84
Query: 318 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK 371
+++ K F FD + DG+I EEL++ G I+ L+++ D +
Sbjct: 85 MKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 372 DGRISLSEFRRLLR 385
DGRI EF ++
Sbjct: 145 DGRIDYDEFLEFMK 158
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 245 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 304
+EEL+DL F D + +G I LEE++ L + E + E+++ D N DG +D
Sbjct: 94 EEELSDL---FRMFDKNADGYIDLEELKIMLQA-TGETITEDDIEELMKDGDKNNDGRID 149
Query: 305 FSEFV 309
+ EF+
Sbjct: 150 YDEFL 154
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 23/125 (18%)
Query: 43 EKDAAVVVRQMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 99
E++ +V + L++A H GL+HRD+KP N F D +K DFGL +
Sbjct: 114 ERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQ 170
Query: 100 GKKFQDI-------------VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF 145
++ Q + VG+ Y++PE + S + D++S+G+I + LL PF
Sbjct: 171 DEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPF 227
Query: 146 WDKTE 150
+ E
Sbjct: 228 STQME 232
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 35 IRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 94
+R+ A +VRQ+ H G HRD+KPEN L + D DFG++
Sbjct: 125 LRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSA---DDFAYLVDFGIA 181
Query: 95 DFIKPGKKFQ--DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPF 145
K Q + VG+ YY APE +D++++ + Y L G P+
Sbjct: 182 SATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPY 235
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 15/78 (19%)
Query: 322 DSEKWHLRSQAAFEKFDIDRDGFITPEEL-RMHTGLKGS--------------IDPLLEE 366
D+ ++S AF FD D DG + E+L R+ L G ID +LEE
Sbjct: 92 DTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEE 151
Query: 367 ADIDKDGRISLSEFRRLL 384
+DID+DG I+LSEF+ ++
Sbjct: 152 SDIDRDGTINLSEFQHVI 169
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
+ ++EL ++R+ F D D NG IS +E+ A+ + L + E + I+Q +D + DG
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAM-RSLGYMPNEVELEVIIQRLDMDGDGQ 88
Query: 303 VDFSEFV 309
VDF EFV
Sbjct: 89 VDFEEFV 95
Score = 33.1 bits (74), Expect = 0.28, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 331 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 384
+ AF+ FD D +GFI+ +EL G ++ +++ D+D DG++ EF LL
Sbjct: 39 REAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 36/162 (22%)
Query: 61 HLH----GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA------ 110
H+H ++HRD+K EN L + ++K DFG + I + D SA
Sbjct: 151 HMHRQKPPIIHRDLKVENLLLSN---QGTIKLCDFGSATTIS---HYPDYSWSAQRRALV 204
Query: 111 ----------YYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 156
Y PE++ S G + D+W++G I Y+L + PF EDG
Sbjct: 205 EEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLR 260
Query: 157 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 198
++ K + P + ++ +L +P RL+ A+ +
Sbjct: 261 IVNGK--YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 37/187 (19%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
H G+VHRD+ P N L +++ + DF L+ V +Y APE++ +
Sbjct: 151 HEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQ 207
Query: 121 KSGPES--DVWSIGVITYILLCGR-----RPFWD------------KTEDGIF------K 155
G D+WS G + + + F++ K ED + +
Sbjct: 208 FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSAR 267
Query: 156 EVLRNK-PDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 210
+ LRN + + W P+ A D + K+L +P+ R++ QAL HP+ D
Sbjct: 268 DYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFD-- 325
Query: 211 EIPIDIS 217
P+D++
Sbjct: 326 --PLDLT 330
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 46 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 105
A + Q+ + H L++RD+KP N K+ +K DFGL +K K
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKNDGKRXR 180
Query: 106 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL--CG----RRPFWDKTEDGIFKEVL 158
G+ Y++PE + + G E D++++G+I LL C F+ DGI ++
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF 240
Query: 159 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 198
K K ++KLL K P R ++ L
Sbjct: 241 DKKE--------------KTLLQKLLSKKPEDRPNTSEIL 266
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 15/78 (19%)
Query: 322 DSEKWHLRSQAAFEKFDIDRDGFITPEEL-RMHTGLKGS--------------IDPLLEE 366
D+ ++S AF FD D DG + E+L R+ L G ID +LEE
Sbjct: 123 DTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEE 182
Query: 367 ADIDKDGRISLSEFRRLL 384
+DID+DG I+LSEF+ ++
Sbjct: 183 SDIDRDGTINLSEFQHVI 200
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 37/187 (19%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
H G+VHRD+ P N L +++ + DF L+ V +Y APE++ +
Sbjct: 151 HEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQ 207
Query: 121 KSGPES--DVWSIGVITYILLCGR-----RPFWD------------KTEDGIF------K 155
G D+WS G + + + F++ K ED + +
Sbjct: 208 FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSAR 267
Query: 156 EVLRNK-PDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 210
+ LRN + + W P+ A D + K+L +P+ R++ QAL HP+ D
Sbjct: 268 DYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFD-- 325
Query: 211 EIPIDIS 217
P+D++
Sbjct: 326 --PLDLT 330
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 45.4 bits (106), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 255 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATL 313
F IDV+ +G++S EE++ ++K +K ++L+ I ++ID + +G +D +EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKR--AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 314 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE---ADID 370
+ + D + + + ++ D+D DG +T EE+ G I+ + E+ AD +
Sbjct: 64 SIQGQDLSDDK---IGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG-IEKVAEQVMKADAN 119
Query: 371 KDGRISLSEF 380
DG I+L EF
Sbjct: 120 GDGYITLEEF 129
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 45.4 bits (106), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 255 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATL 313
F IDV+ +G++S EE++ ++K +K ++L+ I ++ID + +G +D +EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKR--AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 314 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE---ADID 370
+ + D + + + ++ D+D DG +T EE+ G I+ + E+ AD +
Sbjct: 64 SIQGQDLSDDK---IGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG-IEKVAEQVMKADAN 119
Query: 371 KDGRISLSEF 380
DG I+L EF
Sbjct: 120 GDGYITLEEF 129
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 31/169 (18%)
Query: 248 LADLRDQFDAIDVDKNGSISLEEMRQ--ALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 305
L L +F A+D +K G +S +++Q ALA + P + I+++ + VDF
Sbjct: 28 LLRLHHRFRALDRNKKGYLSRMDLQQIGALAVN-PLGDR------IIESFFPDGSQRVDF 80
Query: 306 SEFVAATLHVHQLEEHDSEKWHLRS-----------QAAFEKFDIDRDGFITPEE----L 350
FV H +E+ D+E + AF+ +D+DRDG I+ E L
Sbjct: 81 PGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVL 140
Query: 351 RMHTG-------LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSR 392
R+ G L+ D ++EAD D DG +S EF + L + +
Sbjct: 141 RLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQK 189
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
D ++ + ++ F+ ID +++G I E++ LA + ++ E L+ + G
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS-----MGKNPTDEYLEGMMSEAPGP 55
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---- 358
++F+ F+ T+ +L D E +R+ AF FD + GFI + LR G
Sbjct: 56 INFTMFL--TMFGEKLNGTDPEDV-IRN--AFACFDEEASGFIHEDHLRELLTTMGDRFT 110
Query: 359 --SIDPLLEEADIDKDGRISLSEFRRLLRTAS 388
+D + EA IDK G + EF R+L+ +
Sbjct: 111 DEEVDEMYREAPIDKKGNFNYVEFTRILKHGA 142
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 28/141 (19%)
Query: 12 GELLDRILAK--MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 69
G LLD + + L W + I K Y E+ HG+VHR+
Sbjct: 117 GSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE------------------HGMVHRN 158
Query: 70 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPE 125
+ N L KS S ++ DFG++D + P K + + ++A E + K +
Sbjct: 159 LAARNVLLKSP---SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQ 215
Query: 126 SDVWSIGVITYILLC-GRRPF 145
SDVWS GV + L+ G P+
Sbjct: 216 SDVWSYGVTVWELMTFGAEPY 236
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E+ ++R+ FD D D G+I ++E++ A + L ++ K+ + + + ID G
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVA-XRALGFEPKKEEIKKXISEIDKEGTGK 83
Query: 303 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---- 358
+F +F+ T+ + E D+++ L+ AF+ FD D G I+ + L+ G
Sbjct: 84 XNFGDFL--TVXTQKXSEKDTKEEILK---AFKLFDDDETGKISFKNLKRVAKELGENLT 138
Query: 359 --SIDPLLEEADIDKDGRISLSEFRRLLRTASI 389
+ ++EAD D DG +S EF R+ + S+
Sbjct: 139 DEELQEXIDEADRDGDGEVSEQEFLRIXKKTSL 171
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 48 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---- 103
+ +Q+ A H +HR++ N L + D +K DFGL+ + G ++
Sbjct: 121 LFAQQICEGMAYLHAQHYIHRNLAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 104 QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 139
+D ++ APE LK K SDVWS GV Y LL
Sbjct: 178 EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS- 94
D +T K ++ Q+L H L++RD+KPENFL + K++ + DFGL+
Sbjct: 91 DRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAK 150
Query: 95 DFIKPGKK-------FQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFW 146
++I P K + + G+A Y++ L ++ D+ ++G + L G P W
Sbjct: 151 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP-W 209
Query: 147 DKTEDGIFKEVLRNKPDFRR 166
+ KE + D +R
Sbjct: 210 QGLKADTLKERYQKIGDTKR 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 28/141 (19%)
Query: 12 GELLDRILAK--MISTTLTSAWFLAIRKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 69
G LLD + + L W + I K Y E+ HG+VHR+
Sbjct: 99 GSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE------------------HGMVHRN 140
Query: 70 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPE 125
+ N L KS S ++ DFG++D + P K + + ++A E + K +
Sbjct: 141 LAARNVLLKSP---SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQ 197
Query: 126 SDVWSIGVITYILLC-GRRPF 145
SDVWS GV + L+ G P+
Sbjct: 198 SDVWSYGVTVWELMTFGAEPY 218
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 18/103 (17%)
Query: 290 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 349
++ D N DG VDF EF+AA + Q + KW+ F+ +D D +G I E
Sbjct: 61 QVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWY------FKLYDADGNGSIDKNE 114
Query: 350 L----RMHTGLKGS--------IDPLLEEADIDKDGRISLSEF 380
L L G I+ + + DI+ DG ++L EF
Sbjct: 115 LLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEF 157
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 235 ALRALAS--TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 278
A++AL TL EE +L F ID++ +G ++LEE +AKD
Sbjct: 121 AVQALNGQQTLSPEEFINLV--FHKIDINNDGELTLEEFINGMAKD 164
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 61 HLHGLVHRDMKPENFLF------------KSAKE----DSSLKATDFGLSDFIKPGKKFQ 104
H + L H D+KPEN LF KS +E ++S++ DFG + F +
Sbjct: 140 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHT 197
Query: 105 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITY 136
IV + +Y PEV L+ DVWSIG I +
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILF 230
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 61 HLHGLVHRDMKPENFLF------------KSAKE----DSSLKATDFGLSDFIKPGKKFQ 104
H + L H D+KPEN LF KS +E ++S++ DFG + F +
Sbjct: 149 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHT 206
Query: 105 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITY 136
IV + +Y PEV L+ DVWSIG I +
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILF 239
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 50/199 (25%)
Query: 64 GLVHRDMKPENFLFKSAKEDSSL---KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
G++H D+KPEN L + +L K D G + + + + + + + Y +PEVL
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHYTNSIQTREYRSPEVLLG 209
Query: 121 KS-GPESDVWSIGVITYILLCGRRPF-------WDKTEDGIFK--EVLRNKPDF------ 164
G +D+WS + + L+ G F + K +D I + E+L P +
Sbjct: 210 APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGK 269
Query: 165 ----------------RRKPWP-------------SISNSAKDFVKKLLVKDPRARLTAA 195
+ K WP + DF+ +L DPR R A
Sbjct: 270 YTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329
Query: 196 QALSHPWVREGGDASEIPI 214
++HPW+++ EI +
Sbjct: 330 GLVNHPWLKDTLGMEEIRV 348
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 31/121 (25%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--- 98
TE+ ++ +L H G++HRD+KP N L +D S+K DFGL+ I
Sbjct: 129 TEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDK 185
Query: 99 ----------------PG-------KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSIGV 133
PG K+ V + +Y APE +L+ D+WS G
Sbjct: 186 DIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGC 245
Query: 134 I 134
I
Sbjct: 246 I 246
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 20/87 (22%)
Query: 122 SGPESDVWSIG---VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 178
+ PE D+ I VI YI L R DGI D +K + SIS D
Sbjct: 303 TPPEEDLKCITKQEVIKYIKLFPTR-------DGI---------DLSKK-YSSISKEGID 345
Query: 179 FVKKLLVKDPRARLTAAQALSHPWVRE 205
++ +L + + R+T +ALSHP++++
Sbjct: 346 LLESMLRFNAQKRITIDKALSHPYLKD 372
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 61 HLHGLVHRDMKPENFLF------------KSAKE----DSSLKATDFGLSDFIKPGKKFQ 104
H + L H D+KPEN LF KS +E ++S++ DFG + F +
Sbjct: 172 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHT 229
Query: 105 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITY 136
IV + +Y PEV L+ DVWSIG I +
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILF 262
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 50/199 (25%)
Query: 64 GLVHRDMKPENFLFKSAKEDSSL---KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 120
G++H D+KPEN L + +L K D G + + + + + + + Y +PEVL
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHYTNSIQTREYRSPEVLLG 209
Query: 121 KS-GPESDVWSIGVITYILLCGRRPF-------WDKTEDGIFK--EVLRNKPDF------ 164
G +D+WS + + L+ G F + K +D I + E+L P +
Sbjct: 210 APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGK 269
Query: 165 ----------------RRKPWP-------------SISNSAKDFVKKLLVKDPRARLTAA 195
+ K WP + DF+ +L DPR R A
Sbjct: 270 YTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329
Query: 196 QALSHPWVREGGDASEIPI 214
++HPW+++ EI +
Sbjct: 330 GLVNHPWLKDTLGMEEIRV 348
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 48 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---- 103
+ +Q+ A H +HR++ N L + D +K DFGL+ + G ++
Sbjct: 121 LFAQQICEGMAYLHSQHYIHRNLAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 104 QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 139
+D ++ APE LK K SDVWS GV Y LL
Sbjct: 178 EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 48 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---- 103
+ +Q+ A H +HRD+ N L + D +K DFGL+ + G +
Sbjct: 138 LFAQQICEGMAYLHAQHYIHRDLAARNVLLDN---DRLVKIGDFGLAKAVPEGHEXYRVR 194
Query: 104 QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 139
+D ++ APE LK K SDVWS GV Y LL
Sbjct: 195 EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 17/134 (12%)
Query: 262 KNGSISLEE----MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 317
++G IS +E MR P +L+E ++ +D + G VDF EF+ + V
Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQE-----MIDEVDEDGSGTVDFDEFLV--MMVRC 84
Query: 318 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK 371
+++ K F FD + DG+I EEL++ G I+ L+++ D +
Sbjct: 85 MKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 372 DGRISLSEFRRLLR 385
DGRI EF ++
Sbjct: 145 DGRIDYDEFLEFMK 158
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 245 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 304
+EEL+DL F D + +G I LEE++ L + E + E+++ D N DG +D
Sbjct: 94 EEELSDL---FRMFDKNADGYIDLEELKIMLQA-TGETITEDDIEELMKDGDKNNDGRID 149
Query: 305 FSEFV 309
+ EF+
Sbjct: 150 YDEFL 154
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 120
LVHRD+ N L KS + +K TDFGL+ ++ +K + G ++A E + R
Sbjct: 138 LVHRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 194
Query: 121 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF----RRKPWPSISN 174
K +SDVWS GV + L+ F K DGI R PD R P P I
Sbjct: 195 KFTHQSDVWSYGVTIWELMT----FGGKPYDGI---PTREIPDLLEKGERLPQPPICT 245
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD------IVGSAYYVA 114
H ++HRD+K N L E+ K TDFG+S K G + + G+ Y+
Sbjct: 156 HTRAIIHRDVKSINILLD---ENFVPKITDFGIS---KKGTELDQTHLXXVVKGTLGYID 209
Query: 115 PEV-LKRKSGPESDVWSIGVITYILLCGR 142
PE +K + +SDV+S GV+ + +LC R
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD------IVGSAYYVA 114
H ++HRD+K N L E+ K TDFG+S K G + + G+ Y+
Sbjct: 156 HTRAIIHRDVKSINILLD---ENFVPKITDFGIS---KKGTELGQTHLXXVVKGTLGYID 209
Query: 115 PEV-LKRKSGPESDVWSIGVITYILLCGR 142
PE +K + +SDV+S GV+ + +LC R
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Query: 58 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI---VGSAYYVA 114
E H + HRD K +N L KS D + DFGL+ +PGK D VG+ Y+A
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKS---DLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 115 PEVL------KRKSGPESDVWSIGVITYILL 139
PEVL +R + D++++G++ + L+
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 120
LVHRD+ N L KS + +K TDFGL+ ++ +K + G ++A E + R
Sbjct: 161 LVHRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 217
Query: 121 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF----RRKPWPSISN 174
K +SDVWS GV + L+ F K DGI R PD R P P I
Sbjct: 218 KFTHQSDVWSYGVTIWELMT----FGGKPYDGIPT---REIPDLLEKGERLPQPPICT 268
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 50/186 (26%)
Query: 54 LRVAAEC---HLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 100
L V+A C HLH + HRD K N L KS + D GL+ G
Sbjct: 110 LAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKS---NLQCCIADLGLAVMHSQG 166
Query: 101 KKFQDI-----VGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDK 148
+ DI VG+ Y+APEVL + S +D+W+ G++ + + RR +
Sbjct: 167 SDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNG 224
Query: 149 TEDGI---FKEVLRNKPDFR--------RKPWPSISN---------SAKDFVKKLLVKDP 188
+ F +V+ N P F + P+I N +++ +P
Sbjct: 225 IVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNP 284
Query: 189 RARLTA 194
ARLTA
Sbjct: 285 SARLTA 290
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS- 94
D +T K ++ Q++ H L++RD+KPENFL K ++ DFGL+
Sbjct: 94 DRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAK 153
Query: 95 DFIKPGKK-------FQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFW 146
++I P K + + G+A Y++ L ++ D+ ++G + L G P W
Sbjct: 154 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP-W 212
Query: 147 DKTEDGIFKEVLRNKPDFRR 166
+ KE + D +R
Sbjct: 213 QGLKADTLKERYQKIGDTKR 232
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 58/201 (28%)
Query: 42 TEKDAAVVVRQMLRVAAE-CHLH----------GLVHRDMKPENFLFKSAKEDSSLKATD 90
T D +R +L +A+ HLH + HRD+K +N L K++ D
Sbjct: 129 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNIL---VKKNGQCCIAD 185
Query: 91 FGLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRK-------SGPESDVWSIGVITYIL 138
GL+ D+ VG+ Y+APEVL S D+W+ G++ + +
Sbjct: 186 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
Query: 139 LCGRRPFWDKTEDGI-------FKEVLRNKPDF----------RRKP-----W---PSIS 173
RR +GI F +V+ N P F +++P W P+++
Sbjct: 246 --ARR----MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLT 299
Query: 174 NSAKDFVKKLLVKDPRARLTA 194
+ AK +K+ ++P ARLTA
Sbjct: 300 SLAK-LMKECWYQNPSARLTA 319
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 48 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---- 103
+ +Q+ A H +HR + N L + D +K DFGL+ + G ++
Sbjct: 115 LFAQQICEGMAYLHAQHYIHRALAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVR 171
Query: 104 QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 139
+D ++ APE LK K SDVWS GV Y LL
Sbjct: 172 EDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 48 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---- 103
+ +Q+ A H +HR + N L + D +K DFGL+ + G ++
Sbjct: 116 LFAQQICEGMAYLHAQHYIHRALAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVR 172
Query: 104 QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 139
+D ++ APE LK K SDVWS GV Y LL
Sbjct: 173 EDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 58/201 (28%)
Query: 42 TEKDAAVVVRQMLRVAAE-CHLH----------GLVHRDMKPENFLFKSAKEDSSLKATD 90
T D +R +L +A+ HLH + HRD+K +N L K++ D
Sbjct: 100 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNIL---VKKNGQCCIAD 156
Query: 91 FGLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRK-------SGPESDVWSIGVITYIL 138
GL+ D+ VG+ Y+APEVL S D+W+ G++ + +
Sbjct: 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
Query: 139 LCGRRPFWDKTEDGI-------FKEVLRNKPDF----------RRKP-----W---PSIS 173
RR +GI F +V+ N P F +++P W P+++
Sbjct: 217 --ARR----MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLT 270
Query: 174 NSAKDFVKKLLVKDPRARLTA 194
+ AK +K+ ++P ARLTA
Sbjct: 271 SLAK-LMKECWYQNPSARLTA 290
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 121
VHRD++ N L E+ K DFGL+ I+ ++ G+ + + APE L +
Sbjct: 136 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 122 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
+SDVWS G+ +T + GR P+ + +V R +R P S D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 181 KKLLVKDPRARLT 193
+ KDP R T
Sbjct: 249 CQCWRKDPEERPT 261
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 20/137 (14%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV- 117
VHRD++ N L E+ K DFGL+ I + G KF + APE
Sbjct: 136 VHRDLRAANIL---VGENLVCKVADFGLARLIEDNEXTARQGAKF-----PIKWTAPEAA 187
Query: 118 LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 176
L + +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESL 244
Query: 177 KDFVKKLLVKDPRARLT 193
D + + KDP R T
Sbjct: 245 HDLMCQCWRKDPEERPT 261
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 58/201 (28%)
Query: 42 TEKDAAVVVRQMLRVAAE-CHLH----------GLVHRDMKPENFLFKSAKEDSSLKATD 90
T D +R +L +A+ HLH + HRD+K +N L K++ D
Sbjct: 100 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNIL---VKKNGQCCIAD 156
Query: 91 FGLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRK-------SGPESDVWSIGVITYIL 138
GL+ D+ VG+ Y+APEVL S D+W+ G++ + +
Sbjct: 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
Query: 139 LCGRRPFWDKTEDGI-------FKEVLRNKPDF----------RRKP-----W---PSIS 173
RR +GI F +V+ N P F +++P W P+++
Sbjct: 217 --ARR----MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLT 270
Query: 174 NSAKDFVKKLLVKDPRARLTA 194
+ AK +K+ ++P ARLTA
Sbjct: 271 SLAK-LMKECWYQNPSARLTA 290
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 20/137 (14%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV- 117
VHRD++ N L E+ K DFGL+ I + G KF + APE
Sbjct: 136 VHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAA 187
Query: 118 LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 176
L + +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESL 244
Query: 177 KDFVKKLLVKDPRARLT 193
D + + KDP R T
Sbjct: 245 HDLMCQCWRKDPEERPT 261
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 20/137 (14%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV- 117
VHRD++ N L E+ K DFGL+ I + G KF + APE
Sbjct: 136 VHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAA 187
Query: 118 LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 176
L + +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESL 244
Query: 177 KDFVKKLLVKDPRARLT 193
D + + KDP R T
Sbjct: 245 HDLMCQCWRKDPEERPT 261
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 26/121 (21%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY------------ 112
VHRD+ N L E+ +K DFG+S +D+ + YY
Sbjct: 149 FVHRDLATRNCL---VGENLLVKIGDFGMS---------RDVYSTDYYRVGGHTMLPIRW 196
Query: 113 VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 170
+ PE ++ RK ESDVWS+GV+ + I G++P++ + + + + + + + R + P
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCP 256
Query: 171 S 171
Sbjct: 257 Q 257
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 121
VHRD++ N L E+ K DFGL+ I+ ++ G+ + + APE L +
Sbjct: 136 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 122 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
+SDVWS G+ +T + GR P+ + +V R +R P S D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 181 KKLLVKDPRARLT 193
+ KDP R T
Sbjct: 249 CQCWRKDPEERPT 261
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 81/208 (38%), Gaps = 59/208 (28%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLF-----------KSAKEDSSL-----KATDFGLSD 95
Q+ + H + L H D+KPEN LF K +++ +L K DFG +
Sbjct: 126 QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185
Query: 96 FIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIG--VITYILLCGRRPFWDKTED- 151
+ + +V + +Y APEV L DVWSIG +I Y L P D E
Sbjct: 186 Y--DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 152 GIFKEVL-----------RNKPDFR--RKPWPSISNSAK--------------------- 177
+ + +L R + F R W S++ +
Sbjct: 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303
Query: 178 ---DFVKKLLVKDPRARLTAAQALSHPW 202
D ++K+L DP R+T +AL HP+
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPF 331
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 121
VHRD++ N L E+ K DFGL+ I+ ++ G+ + + APE L +
Sbjct: 136 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 122 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
+SDVWS G+ +T + GR P+ + +V R +R P S D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 181 KKLLVKDPRARLT 193
+ KDP R T
Sbjct: 249 CQCWRKDPEERPT 261
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 20/137 (14%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV- 117
VHRD++ N L E+ K DFGL+ I + G KF + APE
Sbjct: 136 VHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAA 187
Query: 118 LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 176
L + +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESL 244
Query: 177 KDFVKKLLVKDPRARLT 193
D + + KDP R T
Sbjct: 245 HDLMCQCWRKDPEERPT 261
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 21/165 (12%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + +A + ++L + H GLV+ D+KPEN + + LK D G
Sbjct: 175 KGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT----EEQLKLIDLGAVSR 230
Query: 97 IKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 156
I F + G+ + APE+++ +D++++G L + DG+ ++
Sbjct: 231 I---NSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPED 287
Query: 157 --VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 199
VL+ + R +++ + DPR R T A+ +S
Sbjct: 288 DPVLKTYDSYGR------------LLRRAIDPDPRQRFTTAEEMS 320
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 121
VHRD++ N L E+ K DFGL+ I+ ++ G+ + + APE L +
Sbjct: 125 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 180
Query: 122 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
+SDVWS G+ +T + GR P+ + +V R +R P S D +
Sbjct: 181 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 237
Query: 181 KKLLVKDPRARLT 193
+ KDP R T
Sbjct: 238 CQCWRKDPEERPT 250
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 121
VHRD++ N L E+ K DFGL+ I+ ++ G+ + + APE L +
Sbjct: 127 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 182
Query: 122 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
+SDVWS G+ +T + GR P+ + +V R +R P S D +
Sbjct: 183 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 239
Query: 181 KKLLVKDPRARLT 193
+ KDP R T
Sbjct: 240 CQCWRKDPEERPT 252
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 65 LVHRDMKPENFLFKSAKEDSSL--KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL---K 119
+VHRD++ N +S E++ + K DFGLS + ++G+ ++APE + +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 120 RKSGPESDVWSIGVITYILLCGRRPF 145
++D +S +I Y +L G PF
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 19/113 (16%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 97
DS+Y + + A H ++HRD+ N L +E+ ++ DFGL+ +
Sbjct: 102 DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCL---VRENKNVVVADFGLARLM 158
Query: 98 --------------KPG-KKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVI 134
KP KK +VG+ Y++APE++ +S E DV+S G++
Sbjct: 159 VDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIV 211
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
+D + +L++ F D D+NG IS E+R + +L KL + V ++++ D + DG
Sbjct: 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMI-NLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 303 VDFSEFVAATLHV 315
V++ EFV + V
Sbjct: 62 VNYEEFVKMMMTV 74
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 41/63 (65%), Gaps = 6/63 (9%)
Query: 331 QAAFEKFDIDRDGFITPEELR---MHTGLK---GSIDPLLEEADIDKDGRISLSEFRRLL 384
+ AF+ FD D++G+I+ ELR ++ G K ++ +++EAD+D DG+++ EF +++
Sbjct: 12 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 71
Query: 385 RTA 387
T
Sbjct: 72 MTV 74
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
+S L +E++A+ ++ F D D NGSIS E+ + + L E+ V +++ ID +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDG 59
Query: 300 DGLVDFSEFVA 310
+ ++FSEF+A
Sbjct: 60 NHQIEFSEFLA 70
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 333 AFEKFDIDRDGFITPEELRM---HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLL 384
AF FD D +G I+ EL GL S ++ L+ E D+D + +I SEF L+
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSG 123
++H D+KPEN L + K S++K DFG S + G++ + S +Y +PEV L
Sbjct: 161 IIHCDLKPENILLCNPKR-SAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYD 217
Query: 124 PESDVWSIGVITYILLCGRRPFWDKTE 150
D+WS+G I + G F E
Sbjct: 218 LAIDMWSLGCILVEMHTGEPLFSGANE 244
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSG 123
++H D+KPEN L + K S++K DFG S + G++ + S +Y +PEV L
Sbjct: 180 IIHCDLKPENILLCNPKR-SAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 124 PESDVWSIGVI 134
D+WS+G I
Sbjct: 237 LAIDMWSLGCI 247
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 24/135 (17%)
Query: 264 GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 323
G ++ E +Q A+ P + + A D G V F +FV A + + H+
Sbjct: 34 GVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEK 93
Query: 324 EKWHLRSQAAFEKFDIDRDGFITPEEL-------------RMHTGLK-----GSIDPLLE 365
+W F +DI++DG+I EE+ + LK +D +
Sbjct: 94 LRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ 147
Query: 366 EADIDKDGRISLSEF 380
+ D +KDG ++L EF
Sbjct: 148 KMDKNKDGIVTLDEF 162
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 255 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 314
F+A D + GS+ E+ AL+ L + E ++ D N DG ++ E +
Sbjct: 62 FNAFDTTQTGSVKFEDFVTALSILLRGTVHE-KLRWTFNLYDINKDGYINKEEMMDIVKA 120
Query: 315 VHQLE--------EHDSEKWHLRSQAAFEKFDIDRDGFITPEEL 350
++ + + D+ + H+ F+K D ++DG +T +E
Sbjct: 121 IYDMMGKYTYPVLKEDTPRQHV--DVFFQKMDKNKDGIVTLDEF 162
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 251 LRDQFDAIDVDKNGSISLEEMRQALAK--DLPWK-----LKE----SRVLEILQAIDCNT 299
LR F+ D++K+G I+ EEM + D+ K LKE V Q +D N
Sbjct: 94 LRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNK 153
Query: 300 DGLVDFSEFVAA 311
DG+V EF+ +
Sbjct: 154 DGIVTLDEFLES 165
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 121
VHRD++ N L E+ K DFGL I+ ++ G+ + + APE L +
Sbjct: 303 VHRDLRAANIL---VGENLVCKVADFGLGRLIE-DNEYTARQGAKFPIKWTAPEAALYGR 358
Query: 122 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
+SDVWS G+ +T + GR P+ + +V R +R P S D +
Sbjct: 359 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 415
Query: 181 KKLLVKDPRARLT 193
+ KDP R T
Sbjct: 416 CQCWRKDPEERPT 428
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 42.7 bits (99), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHDSEK 325
+G +DF EF+ T+ ++++ DSE+
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTDSEE 83
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAYYVAPEVLK-R 120
+ VHRD+ N L ED+ K +DFGL+ K QD + APE L+ +
Sbjct: 121 NNFVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREK 174
Query: 121 KSGPESDVWSIGVITY-ILLCGRRPF 145
K +SDVWS G++ + I GR P+
Sbjct: 175 KFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 24/136 (17%)
Query: 263 NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 322
+G ++ E +Q A+ P + + A D G V F +FV A + + H+
Sbjct: 66 SGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 125
Query: 323 SEKWHLRSQAAFEKFDIDRDGFITPEEL-------------RMHTGLK-----GSIDPLL 364
+W F +DI++DG+I EE+ + LK +D
Sbjct: 126 KLRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFF 179
Query: 365 EEADIDKDGRISLSEF 380
++ D +KDG ++L EF
Sbjct: 180 QKMDKNKDGIVTLDEF 195
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 31/203 (15%)
Query: 131 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKP----------DFRRKPWPSISNSAKDFV 180
+G + + RRP DK ED + ++ ++P +F ++ + K+
Sbjct: 5 MGTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNEC 64
Query: 181 KKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLK-QFALRAL 239
+V + + AQ H GDAS L N + +K + + AL
Sbjct: 65 PSGVVNEETFKQIYAQFFPH------GDASTYA---HYLFNAFDTTQTGSVKFEDFVTAL 115
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWK-----LKE----SRV 288
+ L LR F+ D++K+G I+ EEM + D+ K LKE V
Sbjct: 116 SILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHV 175
Query: 289 LEILQAIDCNTDGLVDFSEFVAA 311
Q +D N DG+V EF+ +
Sbjct: 176 DVFFQKMDKNKDGIVTLDEFLES 198
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 262 KNGSISLEE----MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 317
++GSIS +E MR P +L+E ++ +D + G VDF EF+ + V
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQE-----MIDEVDEDGSGTVDFDEFLV--MMVRS 84
Query: 318 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK 371
+++ K F +D + DG+I +EL++ G I+ L+++ D +
Sbjct: 85 MKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 372 DGRISLSEFRRLLR 385
DGRI EF ++
Sbjct: 145 DGRIDYDEFLEFMK 158
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 245 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 304
+EEL+DL F D + +G I L+E++ L + E + E+++ D N DG +D
Sbjct: 94 EEELSDL---FRMWDKNADGYIDLDELKIMLQA-TGETITEDDIEELMKDGDKNNDGRID 149
Query: 305 FSEFV 309
+ EF+
Sbjct: 150 YDEFL 154
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 262 KNGSISLEE----MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 317
++GSIS +E MR P +L+E ++ +D + G VDF EF+ + V
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQE-----MIDEVDEDGSGTVDFDEFLV--MMVRS 84
Query: 318 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK 371
+++ K F FD + DG+I +EL++ G I+ L+++ D +
Sbjct: 85 MKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 372 DGRISLSEFRRLLR 385
DGRI E+ ++
Sbjct: 145 DGRIDYDEWLEFMK 158
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 61 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI-------------V 107
H GL+HRD+KP N F D +K DFGL + ++ Q + V
Sbjct: 181 HSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQV 237
Query: 108 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 139
G+ Y++PE + + + D++S+G+I + LL
Sbjct: 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAYYVAPEVLK-R 120
+ VHRD+ N L ED+ K +DFGL+ K QD + APE L+ +
Sbjct: 136 NNFVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREK 189
Query: 121 KSGPESDVWSIGVITY-ILLCGRRPF 145
K +SDVWS G++ + I GR P+
Sbjct: 190 KFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 20/137 (14%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV- 117
VHRD+ N L E+ K DFGL+ I + G KF + APE
Sbjct: 136 VHRDLAAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAA 187
Query: 118 LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 176
L + +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESL 244
Query: 177 KDFVKKLLVKDPRARLT 193
D + + KDP R T
Sbjct: 245 HDLMCQCWRKDPEERPT 261
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 28/152 (18%)
Query: 255 FDAIDVDKNGSISLEEMRQALAKDLPWKL---------KESRVLEILQAIDCNTDGLVDF 305
F+ +D++ NG I+L+E+ + D+ KL + V + I + V+F
Sbjct: 29 FNFLDINGNGKITLDEIVSKASDDICAKLGATPAQTQRHQEAVEAFFKKIGLDYGKEVEF 88
Query: 306 SEFVAATLHVHQLEEHDSEKWHLR--------SQAAFEKFDIDRDGFITPEELRMHTGLK 357
FV +L +HD + W +A F+ FD D G I+ +E + + G+
Sbjct: 89 PAFVNG---WKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWKTYGGIS 145
Query: 358 GSIDPLLEEA-------DIDKDGRISLSEFRR 382
G I P E+A D+D G++ + E R
Sbjct: 146 G-ICPSDEDAEKTFKHCDLDNSGKLDVDEMTR 176
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Query: 44 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK----- 98
K ++ QM+ H +HRD+KP+NFL + + + DFGL+ +
Sbjct: 103 KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162
Query: 99 ---PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 154
P ++ +++ G+A Y + L + D+ S+G + L G P W + G
Sbjct: 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-WQGLKAGTK 221
Query: 155 KE 156
K+
Sbjct: 222 KQ 223
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 52/119 (43%), Gaps = 20/119 (16%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L KS +K TDFGL+ + + G + +L+R
Sbjct: 140 LVHRDLAARNVLVKSPNH---VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF----RRKPWPSISN 174
+ +SDVWS GV + L+ G +P+ DGI R PD R P P I
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPY-----DGIPA---REIPDLLEKGERLPQPPICT 247
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 172 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 228
Query: 121 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 153
+SDVWS GV + L+ F K DGI
Sbjct: 229 IYTHQSDVWSYGVTVWELMT----FGSKPYDGI 257
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAYYVAPEVLK-R 120
+ VHRD+ N L ED+ K +DFGL+ K QD + APE L+ +
Sbjct: 308 NNFVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREK 361
Query: 121 KSGPESDVWSIGVITY-ILLCGRRPF 145
K +SDVWS G++ + I GR P+
Sbjct: 362 KFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 17/134 (12%)
Query: 262 KNGSISLEE----MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 317
++GSIS +E MR P +L+E ++ +D + G VDF EF+ + V
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQE-----MIDEVDEDGSGTVDFDEFLV--MMVRS 84
Query: 318 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK 371
+++ K F D + DG+I +EL++ G I+ L+++ D +
Sbjct: 85 MKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 372 DGRISLSEFRRLLR 385
DGRI EF ++
Sbjct: 145 DGRIDYDEFLEFMK 158
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 246 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 305
EEL+DL F D + +G I L+E++ L + E + E+++ D N DG +D+
Sbjct: 95 EELSDL---FRMXDKNADGYIDLDELKIMLQA-TGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 306 SEFV 309
EF+
Sbjct: 151 DEFL 154
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 17/134 (12%)
Query: 262 KNGSISLEE----MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 317
++GSIS +E MR P +L+E ++ +D + G VDF EF+ + V
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQE-----MIDEVDEDGSGTVDFDEFLV--MMVRS 84
Query: 318 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK 371
+++ K F FD + DG+I +EL++ G I+ L+++ D +
Sbjct: 85 MKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 372 DGRISLSEFRRLLR 385
DGRI E ++
Sbjct: 145 DGRIDYDEXLEFMK 158
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + T KD Q+ R +HRD+ N L E++ +K DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIADFGLARDI 207
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
+ I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 153 IFK 155
+FK
Sbjct: 268 LFK 270
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 132 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 188
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 189 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 144 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 200
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 201 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 229
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 81/208 (38%), Gaps = 59/208 (28%)
Query: 52 QMLRVAAECHLHGLVHRDMKPENFLF-----------KSAKEDSSL-----KATDFGLSD 95
Q+ + H + L H D+KPEN LF K +++ +L K DFG +
Sbjct: 126 QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185
Query: 96 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-SDVWSIG--VITYILLCGRRPFWDKTED- 151
+ + +V +Y APEV+ + DVWSIG +I Y L P D E
Sbjct: 186 Y--DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 152 GIFKEVL-----------RNKPDFR--RKPWPSISNSAK--------------------- 177
+ + +L R + F R W S++ +
Sbjct: 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303
Query: 178 ---DFVKKLLVKDPRARLTAAQALSHPW 202
D ++K+L DP R+T +AL HP+
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPF 331
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 33/117 (28%)
Query: 52 QMLRVAAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 104
Q+L VA++ +L GL VHRD+ N L + +K DFG+S +
Sbjct: 136 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMS---------R 183
Query: 105 DIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWD 147
DI + YY + PE +L RK ESDVWS GV+ + I G++P++
Sbjct: 184 DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 240
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 145 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 230
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + T KD Q+ R +HRD+ N L E++ +K DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIADFGLARDI 207
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
+ I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 153 IFK 155
+FK
Sbjct: 268 LFK 270
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 141 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 226
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 148 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 204
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 205 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 233
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 33/117 (28%)
Query: 52 QMLRVAAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 104
Q+L VA++ +L GL VHRD+ N L + +K DFG+S +
Sbjct: 130 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMS---------R 177
Query: 105 DIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWD 147
DI + YY + PE +L RK ESDVWS GV+ + I G++P++
Sbjct: 178 DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 234
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 97
+ + T KD Q+ R +HRD+ N L E++ +K DFGL+ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIADFGLARDI 207
Query: 98 KPGKKFQDIVGS---AYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
+++ ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 153 IFK 155
+FK
Sbjct: 268 LFK 270
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 145 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 230
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 145 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 230
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 140 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 225
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 223
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 135 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 191
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 192 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 220
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 33/117 (28%)
Query: 52 QMLRVAAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 104
Q+L VA++ +L GL VHRD+ N L + +K DFG+S +
Sbjct: 159 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMS---------R 206
Query: 105 DIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWD 147
DI + YY + PE +L RK ESDVWS GV+ + I G++P++
Sbjct: 207 DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 263
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-R 120
+VHRD+K N L + ++K DFGLS F + G+ ++APEVL+
Sbjct: 160 IVHRDLKSPNLL---VDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 121 KSGPESDVWSIGVITYILLCGRRPF 145
S +SDV+S GVI + L ++P+
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPW 239
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 139 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 196 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 224
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 223
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 223
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 139 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 196 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 224
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 223
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 141 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 226
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 141 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 226
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 140 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 225
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 142 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 198
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 199 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 227
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 141 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 226
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 121
VHRD++ N L E+ K DFGL+ I+ ++ G+ + + APE L +
Sbjct: 133 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 188
Query: 122 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
+SDVWS G+ +T + GR P+ + +V R +R P S D +
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 245
Query: 181 KKLLVKDPRARLT 193
+ K+P R T
Sbjct: 246 CQCWRKEPEERPT 258
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 20/137 (14%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV- 117
VHRD++ N L E+ K DFGL+ I + G KF + APE
Sbjct: 126 VHRDLRAANIL---VGENLVCKVADFGLARLIEDNEXTARQGAKF-----PIKWTAPEAA 177
Query: 118 LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 176
L + +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 178 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESL 234
Query: 177 KDFVKKLLVKDPRARLT 193
D + + K+P R T
Sbjct: 235 HDLMCQCWRKEPEERPT 251
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 121
VHRD++ N L E+ K DFGL+ I+ ++ G+ + + APE L +
Sbjct: 129 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 184
Query: 122 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
+SDVWS G+ +T + GR P+ + +V R +R P S D +
Sbjct: 185 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 241
Query: 181 KKLLVKDPRARLT 193
+ K+P R T
Sbjct: 242 CQCWRKEPEERPT 254
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 24/135 (17%)
Query: 264 GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 323
G ++ + +Q A+ P + + A D G V F +FV A + + H+
Sbjct: 31 GVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEK 90
Query: 324 EKWHLRSQAAFEKFDIDRDGFITPEEL----RMHTGLKGS--------------IDPLLE 365
+W F +DI++DG+I EE+ + + G+ +D +
Sbjct: 91 LRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQ 144
Query: 366 EADIDKDGRISLSEF 380
+ D +KDG ++L EF
Sbjct: 145 KMDKNKDGIVTLDEF 159
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 255 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 314
F+A D + GS+ E+ AL+ L + E ++ D N DG ++ E +
Sbjct: 59 FNAFDTTQTGSVKFEDFVTALSILLRGTVHE-KLRWTFNLYDINKDGYINKEEMMDIVKA 117
Query: 315 VHQLE--------EHDSEKWHLRSQAAFEKFDIDRDGFITPEEL 350
++ + D+ + H+ F+K D ++DG +T +E
Sbjct: 118 IYDMMGAYTYPVLAEDTPRQHV--DVFFQKMDKNKDGIVTLDEF 159
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 19/76 (25%)
Query: 251 LRDQFDAIDVDKNGSISLEEMRQ---------------ALAKDLPWKLKESRVLEILQAI 295
LR F+ D++K+G I+ EEM LA+D P V Q +
Sbjct: 91 LRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTP----RQHVDVFFQKM 146
Query: 296 DCNTDGLVDFSEFVAA 311
D N DG+V EF+ +
Sbjct: 147 DKNKDGIVTLDEFLES 162
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 20/137 (14%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV- 117
VHRD++ N L E+ K DFGL+ I + G KF + APE
Sbjct: 133 VHRDLRAANIL---VGENLVCKVADFGLARLIEDNEWTARQGAKF-----PIKWTAPEAA 184
Query: 118 LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 176
L + +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESL 241
Query: 177 KDFVKKLLVKDPRARLT 193
D + + K+P R T
Sbjct: 242 HDLMCQCWRKEPEERPT 258
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 121
VHRD++ N L E+ K DFGL+ I+ ++ G+ + + APE L +
Sbjct: 302 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 122 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
+SDVWS G+ +T + GR P+ + +V R +R P S D +
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 414
Query: 181 KKLLVKDPRARLT 193
+ K+P R T
Sbjct: 415 CQCWRKEPEERPT 427
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 120
LVHRD+ N L K+ + +K TDFGL+ + +K G + +L R
Sbjct: 163 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 219
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 153
+SDVWS GV + L+ G +P+ DGI
Sbjct: 220 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 248
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDI 200
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 201 HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 153 IFK 155
+FK
Sbjct: 261 LFK 263
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 45/220 (20%)
Query: 2 ILSFTRLCEGGELLDRILAKMISTTLTSAWFL-------AIRKDSRYTEKDAAVVVRQML 54
I+ F +C G+ L + M L FL I D + + + + QML
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNK--FLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 55 RVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 107
+A++ +L VHRD+ N L + + +K DFG+S +D+
Sbjct: 137 HIASQIASGMVYLASQHFVHRDLATRNCLVGA---NLLVKIGDFGMS---------RDVY 184
Query: 108 GSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGI 153
+ YY + PE ++ RK ESDVWS GVI + I G++P++ + +
Sbjct: 185 STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 244
Query: 154 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 193
+ + + + R + P D + ++P+ RL
Sbjct: 245 IECITQGRVLERPRVCP---KEVYDVMLGCWQREPQQRLN 281
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 121
VHRD++ N L E+ K DFGL+ I+ ++ G+ + + APE L +
Sbjct: 302 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 122 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
+SDVWS G+ +T + GR P+ + +V R +R P S D +
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 414
Query: 181 KKLLVKDPRARLT 193
+ K+P R T
Sbjct: 415 CQCWRKEPEERPT 427
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 121
VHRD++ N L E+ K DFGL+ I+ ++ G+ + + APE L +
Sbjct: 302 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 122 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
+SDVWS G+ +T + GR P+ + +V R +R P S D +
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 414
Query: 181 KKLLVKDPRARLT 193
+ K+P R T
Sbjct: 415 CQCWRKEPEERPT 427
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 19/130 (14%)
Query: 264 GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 323
G ++L E +Q V ++ + D N DG +DF E+VAA V + +
Sbjct: 30 GQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQK 89
Query: 324 EKWHLRSQAAFEKFDIDRDGFITPEEL-----------RMHTGLKGS--IDPLLEEADID 370
+W+ F+ +D+D +G I EL R + + + + ++ DI+
Sbjct: 90 LRWY------FKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDIN 143
Query: 371 KDGRISLSEF 380
DG +SL EF
Sbjct: 144 GDGELSLEEF 153
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 235 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 278
A+ + EE ++ FD ID++ +G +SLEE + + KD
Sbjct: 119 AINRCNEAMTAEEFTNMV--FDKIDINGDGELSLEEFMEGVQKD 160
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 26/167 (15%)
Query: 247 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFS 306
++ L +F ++D +NG++S E+ ++ +P I+ A + V+F
Sbjct: 27 QITRLYSRFTSLDKGENGTLSREDFQR-----IPELAINPLGDRIINAFFSEGEDQVNFR 81
Query: 307 EFVAATLHVHQLEEHDSEK-------WHLRSQA---AFEKFDIDRDGFITPEEL----RM 352
F+ H +E+++ K + RS AF +D+D+D I+ +EL RM
Sbjct: 82 GFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRM 141
Query: 353 HTGLK------GSI-DPLLEEADIDKDGRISLSEFRRLLRTASISSR 392
G+ GSI D ++EAD D D IS +EF ++L + +
Sbjct: 142 MVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQK 188
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E+ ++R+ FD D D +G+I +E++ A+ + L ++ K+ + +++ ID + G
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAM-RALGFEPKKEEIKKMISEIDKDGSGT 82
Query: 303 VDFSEFVA 310
+DF EF+
Sbjct: 83 IDFEEFLT 90
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---APEVLK 119
H +HRD+ N L D +K +DFG++ ++ ++ VG+ + V APEV
Sbjct: 123 HQFIHRDLAARNCL---VDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFH 178
Query: 120 R-KSGPESDVWSIGVITY-ILLCGRRPF 145
K +SDVW+ G++ + + G+ P+
Sbjct: 179 YFKYSSKSDVWAFGILMWEVFSLGKMPY 206
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 24/135 (17%)
Query: 264 GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 323
G ++ + +Q A+ P + + A D G V F +FV A + + H+
Sbjct: 31 GVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEK 90
Query: 324 EKWHLRSQAAFEKFDIDRDGFITPEEL-------------RMHTGLK-----GSIDPLLE 365
+W F +DI++DG+I EE+ + LK +D +
Sbjct: 91 LRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ 144
Query: 366 EADIDKDGRISLSEF 380
+ D +KDG ++L EF
Sbjct: 145 KMDKNKDGIVTLDEF 159
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 255 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 314
F+A D + GS+ E+ AL+ L + E ++ D N DG ++ E +
Sbjct: 59 FNAFDTTQTGSVKFEDFVTALSILLRGTVHE-KLRWTFNLYDINKDGYINKEEMMDIVKA 117
Query: 315 VHQLE--------EHDSEKWHLRSQAAFEKFDIDRDGFITPEEL 350
++ + + D+ + H+ F+K D ++DG +T +E
Sbjct: 118 IYDMMGKYTYPVLKEDTPRQHV--DVFFQKMDKNKDGIVTLDEF 159
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 251 LRDQFDAIDVDKNGSISLEEMRQALAK--DLPWK-----LKE----SRVLEILQAIDCNT 299
LR F+ D++K+G I+ EEM + D+ K LKE V Q +D N
Sbjct: 91 LRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNK 150
Query: 300 DGLVDFSEFVAA 311
DG+V EF+ +
Sbjct: 151 DGIVTLDEFLES 162
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 33/128 (25%)
Query: 42 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIK 98
TE ++ +L H G++HRD+KP N L +D S+K DFGL+ D+ +
Sbjct: 154 TELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCL---VNQDCSVKVCDFGLARTVDYPE 210
Query: 99 PG-------------------------KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSI 131
G ++ V + +Y APE +L+ DVWSI
Sbjct: 211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSI 270
Query: 132 GVITYILL 139
G I LL
Sbjct: 271 GCIFAELL 278
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 169 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 205
+P+ S A +K++LV +P R+T + L+HP+ +E
Sbjct: 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 121
VHRD++ N L E+ K DFGL+ I+ ++ G+ + + APE L +
Sbjct: 385 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 440
Query: 122 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 180
+SDVWS G+ +T + GR P+ + +V R +R P S D +
Sbjct: 441 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 497
Query: 181 KKLLVKDPRARLT 193
+ K+P R T
Sbjct: 498 CQCWRKEPEERPT 510
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + T KD Q+ R +HRD+ N L E++ +K DFGL+
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIADFGLARDI 253
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
+ I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 254 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 313
Query: 153 IFK 155
+FK
Sbjct: 314 LFK 316
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 120
++HRD+ N L E+ +K +DFG++ F+ ++ G+ + + +PEV
Sbjct: 124 VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 179
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 157
+ +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 120
++HRD+ N L E+ +K +DFG++ F+ ++ G+ + + +PEV
Sbjct: 125 VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 180
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 157
+ +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 244 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 303
D EE +L++ F D D+NG IS E+R + +L KL + V ++++ D + DG V
Sbjct: 1 DAEE--ELKEAFKVFDKDQNGYISASELRHVMI-NLGEKLTDEEVEQMIKEADLDGDGQV 57
Query: 304 DFSEFVAATLHV 315
++ EFV + V
Sbjct: 58 NYEEFVKMMMTV 69
Score = 40.0 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 42/62 (67%), Gaps = 6/62 (9%)
Query: 331 QAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLL 384
+ AF+ FD D++G+I+ ELR ++ G K + ++ +++EAD+D DG+++ EF +++
Sbjct: 7 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 66
Query: 385 RT 386
T
Sbjct: 67 MT 68
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 40 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK- 98
+++ K ++ QM+ H +HRD+KP+NFL K+ + + DFGL+ +
Sbjct: 99 KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158
Query: 99 -------PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 145
P ++ +++ G+A Y + L + D+ S+G + G P+
Sbjct: 159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 213
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 120
++HRD+ N L E+ +K +DFG++ F+ ++ G+ + + +PEV
Sbjct: 124 VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 179
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 157
+ +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 24/136 (17%)
Query: 263 NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 322
+G ++ E ++ + P+ + + D + +G +DF EF+ A + E +D
Sbjct: 40 SGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELND 99
Query: 323 SEKWHLRSQAAFEKFDIDRDGFITPEE-LRMHTGLK---GSIDPLLEEADI--------- 369
W AF+ +D+D +G I+ +E LR+ + GS+ L E+ D
Sbjct: 100 KLIW------AFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIF 153
Query: 370 -----DKDGRISLSEF 380
+KDG+++L EF
Sbjct: 154 NMMDKNKDGQLTLEEF 169
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 120
++HRD+ N L E+ +K +DFG++ F+ ++ G+ + + +PEV
Sbjct: 127 VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 182
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 157
+ +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSG 123
++H D+KPEN L + K ++K DFG S + G++ + S +Y +PEV L
Sbjct: 180 IIHCDLKPENILLCNPKR-XAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 124 PESDVWSIGVI 134
D+WS+G I
Sbjct: 237 LAIDMWSLGCI 247
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 318 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-----KGSIDPLLEEADIDK 371
++E DSE+ + AF+ FD D +G I+ ELR + T L +D ++ EADID
Sbjct: 1 MKEQDSEEELIE---AFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDG 57
Query: 372 DGRISLSEFRRLL 384
DG I+ EF R++
Sbjct: 58 DGHINYEEFVRMM 70
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 120
++HRD+ N L E+ +K +DFG++ F+ ++ G+ + + +PEV
Sbjct: 122 VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 177
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 157
+ +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 40 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK- 98
+++ K ++ QM+ H +HRD+KP+NFL K+ + + DFGL+ +
Sbjct: 101 KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160
Query: 99 -------PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 145
P ++ +++ G+A Y + L + D+ S+G + G P+
Sbjct: 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 215
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + T KD Q+ R +HRD+ N L E++ +K DFGL+
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVL---VTENNVMKIADFGLARDI 194
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
+ I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 254
Query: 153 IFK 155
+FK
Sbjct: 255 LFK 257
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + T KD Q+ R +HRD+ N L E++ +K DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIADFGLARDI 207
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
+ I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 153 IFK 155
+FK
Sbjct: 268 LFK 270
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + T KD Q+ R +HRD+ N L E++ +K DFGL+
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIADFGLARDI 196
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
+ I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 256
Query: 153 IFK 155
+FK
Sbjct: 257 LFK 259
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + T KD Q+ R +HRD+ N L E++ +K DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIADFGLARDI 207
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
+ I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 153 IFK 155
+FK
Sbjct: 268 LFK 270
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 40 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK- 98
+++ K ++ QM+ H +HRD+KP+NFL K+ + + DFGL+ +
Sbjct: 101 KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160
Query: 99 -------PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 145
P ++ +++ G+A Y + L + D+ S+G + G P+
Sbjct: 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 215
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + T KD Q+ R +HRD+ N L E++ +K DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIADFGLARDI 207
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
+ I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 153 IFK 155
+FK
Sbjct: 268 LFK 270
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + T KD Q+ R +HRD+ N L E++ +K DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIADFGLARDI 207
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
+ I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 153 IFK 155
+FK
Sbjct: 268 LFK 270
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 120
++HRD+ N L E+ +K +DFG++ F+ ++ G+ + + +PEV
Sbjct: 144 VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 199
Query: 121 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 157
+ +SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
L + +EEL+ F + +G I+ +E + +K P ++ + ++ D N
Sbjct: 18 LNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDAN 75
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE-LRMHTGLK 357
+DG +DF E+V A LH+ + K + + + AF +D+D +G I+ E L + T +
Sbjct: 76 SDGTLDFKEYVIA-LHMTS-----AGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
Query: 358 GSIDP 362
I P
Sbjct: 130 KMISP 134
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 65 LVHRDMKPENFLFKSAKEDSSL--KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL---K 119
+VHRD++ N +S E++ + K DFG S + ++G+ ++APE + +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 120 RKSGPESDVWSIGVITYILLCGRRPF 145
++D +S +I Y +L G PF
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + T KD Q+ R +HRD+ N L E++ +K DFGL+
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIADFGLARDI 199
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
+ I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 200 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 259
Query: 153 IFK 155
+FK
Sbjct: 260 LFK 262
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-R 120
+VHR++K N L + ++K DFGLS F + G+ ++APEVL+
Sbjct: 160 IVHRNLKSPNLL---VDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 121 KSGPESDVWSIGVITYILLCGRRPF 145
S +SDV+S GVI + L ++P+
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPW 239
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
L + +EEL+ F + +G I+ +E + +K P ++ + ++ D N
Sbjct: 18 LNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDAN 75
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE-LRMHTGLK 357
+DG +DF E+V A LH+ + K + + + AF +D+D +G I+ E L + T +
Sbjct: 76 SDGTLDFKEYVIA-LHM-----TSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
Query: 358 GSIDP 362
I P
Sbjct: 130 KMISP 134
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
L + +EEL+ F + +G I+ +E + +K P ++ + ++ D N
Sbjct: 18 LNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDAN 75
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE-LRMHTGLK 357
+DG +DF E+V A LH+ + K + + + AF +D+D +G I+ E L + T +
Sbjct: 76 SDGTLDFKEYVIA-LHM-----TSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
Query: 358 GSIDP 362
I P
Sbjct: 130 KMISP 134
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + T KD Q+ R +HRD+ N L E++ +K DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIADFGLARDI 207
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
+ I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 153 IFK 155
+FK
Sbjct: 268 LFK 270
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
L + +EEL+ F + +G I+ +E + +K P ++ + ++ D N
Sbjct: 19 LNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDAN 76
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE-LRMHTGLK 357
+DG +DF E+V A LH+ + K + + + AF +D+D +G I+ E L + T +
Sbjct: 77 SDGTLDFKEYVIA-LHM-----TSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIF 130
Query: 358 GSIDP 362
I P
Sbjct: 131 KMISP 135
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 63 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAYYVAPEVLKRK 121
+ VHRD+ N L ED+ K +DFGL+ K QD + APE L+
Sbjct: 127 NNFVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREA 180
Query: 122 S-GPESDVWSIGVITY-ILLCGRRPF 145
+ +SDVWS G++ + I GR P+
Sbjct: 181 AFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFV 309
DG +DF EF+
Sbjct: 60 DGTIDFPEFL 69
Score = 30.4 bits (67), Expect = 1.6, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 331 QAAFEKFDIDRDGFITPEELRM------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 384
+ AF FD D DG IT +EL + + ++ E D D DG I EF ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 72
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 244 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 303
D EE +L++ F D D+NG IS E+R + +L KL + V E+++ D + DG +
Sbjct: 1 DSEE--ELKEAFRVFDKDQNGFISAAELRHVMT-NLGEKLTDEEVDEMIREADVDGDGQI 57
Query: 304 DFSEFVAATL 313
++ EFV +
Sbjct: 58 NYEEFVKVMM 67
Score = 40.0 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Query: 331 QAAFEKFDIDRDGFITPEELR-MHTGL-----KGSIDPLLEEADIDKDGRISLSEFRRLL 384
+ AF FD D++GFI+ ELR + T L +D ++ EAD+D DG+I+ EF +++
Sbjct: 7 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 66
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK--SAKEDSSLKATDFGLS- 94
D ++ K ++ Q++ H L++RD+KPENFL K + DFGL+
Sbjct: 99 DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAK 158
Query: 95 DFIKPGKK-------FQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFW 146
++I P K + + G+A Y++ L ++ D+ ++G + L G P W
Sbjct: 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP-W 217
Query: 147 DKTEDGIFKEVLRNKPDFRR 166
+ KE + D +R
Sbjct: 218 QGLKADTLKERYQKIGDTKR 237
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--KPGKKFQDIVGSAYYVAPEVLKR-K 121
++HRD+K N L E+ DFGL+ + K + G+ ++APE L K
Sbjct: 163 IIHRDVKAANILLD---EEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGK 219
Query: 122 SGPESDVWSIGVITYILLCGRRPF 145
S ++DV+ GV+ L+ G+R F
Sbjct: 220 SSEKTDVFGYGVMLLELITGQRAF 243
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 20/113 (17%)
Query: 49 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL---SDFIKPGK---K 102
+ +++++ H G++H+D+K +N + + K + TDFGL S ++ G+ K
Sbjct: 135 IAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGK----VVITDFGLFSISGVLQAGRREDK 190
Query: 103 FQDIVGSAYYVAPEVLKRKS----------GPESDVWSIGVITYILLCGRRPF 145
+ G ++APE++++ S SDV+++G I Y L PF
Sbjct: 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDI 185
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 186 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 245
Query: 153 IFK 155
+FK
Sbjct: 246 LFK 248
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 26/167 (15%)
Query: 247 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFS 306
++ L +F ++D +NG++S E+ ++ +P I+ A + V+F
Sbjct: 27 QITRLYSRFTSLDKGENGTLSREDFQR-----IPELAINPLGDRIINAFFPEGEDQVNFR 81
Query: 307 EFVAATLHVHQLEEHDSEK-------WHLRSQA---AFEKFDIDRDGFITPEEL----RM 352
F+ H +E+++ K + RS AF +D+D+D I+ +EL RM
Sbjct: 82 GFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQVLRM 141
Query: 353 HTGLK------GSI-DPLLEEADIDKDGRISLSEFRRLLRTASISSR 392
G+ GSI D ++EAD D D IS +EF ++L + +
Sbjct: 142 MVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQK 188
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDI 189
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 190 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 249
Query: 153 IFK 155
+FK
Sbjct: 250 LFK 252
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDI 200
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 153 IFK 155
+FK
Sbjct: 261 LFK 263
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDI 193
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 194 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 253
Query: 153 IFK 155
+FK
Sbjct: 254 LFK 256
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDI 192
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 193 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 252
Query: 153 IFK 155
+FK
Sbjct: 253 LFK 255
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDI 200
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 153 IFK 155
+FK
Sbjct: 261 LFK 263
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 242 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 301
+L EE+ +LR+ F D DK+G I+ ++ + + + + E ++E+ Q I+ N G
Sbjct: 3 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELSQQINMNLGG 61
Query: 302 LVDFSEFV 309
VDF +FV
Sbjct: 62 HVDFDDFV 69
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDI 200
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 153 IFK 155
+FK
Sbjct: 261 LFK 263
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + + KD Q+ R +HRD+ N L ED+ +K DFGL+
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDI 241
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 242 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 301
Query: 153 IFK 155
+FK
Sbjct: 302 LFK 304
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 65 LVHRDMKPENFLFKSAKEDSSL--KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL---K 119
+VHRD++ N +S E++ + K DF LS + ++G+ ++APE + +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 120 RKSGPESDVWSIGVITYILLCGRRPF 145
++D +S +I Y +L G PF
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 40.0 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 243 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 302
L +E+ ++++ FD D +K GSI E++ A+ + L + +K+ +LE++ D +G
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAM-RALGFDVKKPEILELMNEYDREGNGY 59
Query: 303 VDFSEFV 309
+ F +F+
Sbjct: 60 IGFDDFL 66
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 38 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 94
+ + T KD Q+ R +HRD+ N L E++ ++ DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMRIADFGLARDI 207
Query: 95 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 152
+ I KK + ++APE L R +SDVWS GV+ + I G P+ +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 153 IFK 155
+FK
Sbjct: 268 LFK 270
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--KPGKKFQDIVGSAYYVAPEVLKR-K 121
++HRD+K N L E+ DFGL+ + K + G ++APE L K
Sbjct: 155 IIHRDVKAANILLD---EEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGK 211
Query: 122 SGPESDVWSIGVITYILLCGRRPF 145
S ++DV+ GV+ L+ G+R F
Sbjct: 212 SSEKTDVFGYGVMLLELITGQRAF 235
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 66 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVL-KR 120
+HRD+ N L ++ ++ +K DFGL+ + K+F + ++ APE L +
Sbjct: 136 IHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 121 KSGPESDVWSIGVITYILL 139
K SDVWS GV+ Y L
Sbjct: 193 KFSVASDVWSFGVVLYELF 211
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 7/112 (6%)
Query: 255 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 314
F D D NG I EE L+ L+E ++ + D N DG + F E +
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEE-KLSWAFELYDLNHDGYITFDEMLTIVAS 127
Query: 315 VHQLE------EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSI 360
V+++ D +R + F+ D + DG+IT +E R + + SI
Sbjct: 128 VYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSI 179
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 28/139 (20%)
Query: 263 NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA--ATLHVHQLEE 320
+G ++ E+ + + P+ E + D + +G + F EF+ +T LEE
Sbjct: 40 SGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE 99
Query: 321 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG----LKGSIDPLLEE---------- 366
S W AFE +D++ DG+IT +E+ + GS+ L E+
Sbjct: 100 KLS--W------AFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKK 151
Query: 367 ----ADIDKDGRISLSEFR 381
D ++DG I+L EFR
Sbjct: 152 IFKLMDKNEDGYITLDEFR 170
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVL-KR 120
+HRD+ N L + +K +DFGLS ++ ++ VGS + + PEVL
Sbjct: 125 FLHRDLAARNCL---VNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS 180
Query: 121 KSGPESDVWSIGVITY-ILLCGRRPF 145
K +SD+W+ GV+ + I G+ P+
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLKR- 120
+HRD+ N L + +K +DFGLS ++ ++ VGS + + PEVL
Sbjct: 126 FLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYS 181
Query: 121 KSGPESDVWSIGVITY-ILLCGRRPF 145
K +SD+W+ GV+ + I G+ P+
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
L + +EEL+ F + +G I+ +E + +K P ++ + ++ D N
Sbjct: 18 LNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDAN 75
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE-LRMHTGLK 357
+DG +DF ++V A LH+ + K + + + AF +D+D +G I+ E L + T +
Sbjct: 76 SDGTLDFKQYVIA-LHM-----TSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
Query: 358 GSIDP 362
I P
Sbjct: 130 KMISP 134
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVL-KR 120
+HRD+ N L + +K +DFGLS ++ ++ VGS + + PEVL
Sbjct: 132 FLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYS 187
Query: 121 KSGPESDVWSIGVITY-ILLCGRRPF 145
K +SD+W+ GV+ + I G+ P+
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 239 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 298
L + +EEL+ F + +G I+ +E + +K P ++ + ++ D N
Sbjct: 18 LNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDAN 75
Query: 299 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE-LRMHTGLK 357
+DG +DF ++V A LH+ + K + + + AF +D+D +G I+ E L + T +
Sbjct: 76 SDGTLDFKQYVIA-LHM-----TSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
Query: 358 GSIDP 362
I P
Sbjct: 130 KMISP 134
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---APEVLKR- 120
+HRD+ N L + +K +DFGLS ++ ++ VGS + V PEVL
Sbjct: 121 FLHRDLAARNCL---VNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 121 KSGPESDVWSIGVITY-ILLCGRRPF 145
K +SD+W+ GV+ + I G+ P+
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 24/172 (13%)
Query: 37 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 96
K + TE ++ + R H G HRD+KP N L + + +
Sbjct: 127 KGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186
Query: 97 IKPGKK----FQDIVG---SAYYVAPEVLKRKSG----PESDVWSIGVITYILLCGRRPF 145
G + QD + Y APE+ +S +DVWS+G + Y ++ G P+
Sbjct: 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
Query: 146 WDKTEDGIFKE------VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 191
D +F++ ++N+ + P S++ + ++ DP R
Sbjct: 247 -----DMVFQKGDSVALAVQNQLSIPQS--PRHSSALWQLLNSMMTVDPHQR 291
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFVAATLHVHQLEEHD 322
+G +DF EF+ T+ ++++ D
Sbjct: 60 NGTIDFPEFL--TMMARKMKDTD 80
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFV 309
+G +DF EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 60
Query: 300 DGLVDFSEFV 309
+G +DF EF+
Sbjct: 61 NGTIDFPEFL 70
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 65 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---APEVL-KR 120
+HRD+ N L + +K +DFGLS ++ ++ VGS + V PEVL
Sbjct: 141 FLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYS 196
Query: 121 KSGPESDVWSIGVITY-ILLCGRRPF 145
K +SD+W+ GV+ + I G+ P+
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFV 309
+G +DF EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 300 DGLVDFSEFV 309
+G +DF EF+
Sbjct: 60 NGTIDFPEFL 69
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 240 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 299
A L +E++ D ++ F D D +G I++EE+ + + L E + +++ +D +
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVI-RSLDQNPTEEELQDMISEVDADG 59
Query: 300 DGLVDFSEFVA 310
+G ++F EF++
Sbjct: 60 NGTIEFDEFLS 70
Score = 30.4 bits (67), Expect = 1.9, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 323 SEKWHLRSQAAFEKFDIDRDGFITPEELRM------HTGLKGSIDPLLEEADIDKDGRIS 376
SE+ + + AF FD D DG IT EEL + + ++ E D D +G I
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 377 LSEFRRLL 384
EF L+
Sbjct: 65 FDEFLSLM 72
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,892,410
Number of Sequences: 62578
Number of extensions: 488330
Number of successful extensions: 4957
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 539
Number of HSP's that attempted gapping in prelim test: 1994
Number of HSP's gapped (non-prelim): 1720
length of query: 407
length of database: 14,973,337
effective HSP length: 101
effective length of query: 306
effective length of database: 8,652,959
effective search space: 2647805454
effective search space used: 2647805454
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)