Query 015424
Match_columns 407
No_of_seqs 290 out of 1607
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 12:23:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015424.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015424hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tsm_A IGPS, indole-3-glycerol 100.0 5.8E-72 2E-76 543.9 30.9 267 120-404 3-269 (272)
2 4a29_A Engineered retro-aldol 100.0 2.5E-69 8.5E-74 519.7 25.2 243 124-402 6-248 (258)
3 1i4n_A Indole-3-glycerol phosp 100.0 8.3E-68 2.8E-72 509.5 24.3 248 125-402 1-248 (251)
4 1pii_A N-(5'phosphoribosyl)ant 100.0 1.5E-67 5.1E-72 543.7 27.3 254 124-403 2-255 (452)
5 3qja_A IGPS, indole-3-glycerol 100.0 1.4E-66 4.9E-71 505.4 28.9 259 123-403 3-261 (272)
6 1vc4_A Indole-3-glycerol phosp 100.0 8.5E-62 2.9E-66 467.2 22.9 247 120-402 5-254 (254)
7 3q58_A N-acetylmannosamine-6-p 100.0 7E-32 2.4E-36 255.7 17.4 198 178-401 19-227 (229)
8 3igs_A N-acetylmannosamine-6-p 100.0 2.2E-31 7.6E-36 252.5 16.7 199 178-402 19-228 (232)
9 2yzr_A Pyridoxal biosynthesis 100.0 4.8E-32 1.6E-36 268.6 3.1 191 196-402 23-289 (330)
10 4adt_A Pyridoxine biosynthetic 100.0 5.7E-31 1.9E-35 258.7 10.1 197 190-402 21-256 (297)
11 1hg3_A Triosephosphate isomera 100.0 3.3E-28 1.1E-32 230.7 16.3 206 176-402 6-223 (225)
12 1w0m_A TIM, triosephosphate is 100.0 3.7E-28 1.3E-32 230.5 13.8 205 177-402 4-220 (226)
13 2h6r_A Triosephosphate isomera 99.9 1.4E-25 4.6E-30 210.6 12.2 171 220-402 35-217 (219)
14 3o07_A Pyridoxine biosynthesis 99.9 7.8E-25 2.7E-29 212.6 9.6 189 198-402 19-247 (291)
15 2w6r_A Imidazole glycerol phos 99.9 7.4E-22 2.5E-26 187.0 16.0 194 190-402 23-247 (266)
16 2nv1_A Pyridoxal biosynthesis 99.9 9.5E-23 3.3E-27 199.1 8.6 193 196-402 27-256 (305)
17 1ka9_F Imidazole glycerol phos 99.9 1.3E-20 4.4E-25 176.8 18.7 194 195-405 29-247 (252)
18 2y88_A Phosphoribosyl isomeras 99.9 3.1E-21 1.1E-25 180.2 14.1 182 198-400 32-241 (244)
19 1thf_D HISF protein; thermophI 99.9 1.8E-20 6.1E-25 176.0 19.0 192 195-405 28-246 (253)
20 1vzw_A Phosphoribosyl isomeras 99.8 1.4E-20 4.8E-25 176.4 13.8 184 198-400 33-238 (244)
21 1y0e_A Putative N-acetylmannos 99.8 9.8E-20 3.4E-24 168.2 16.6 186 193-401 19-218 (223)
22 1yxy_A Putative N-acetylmannos 99.8 6.1E-19 2.1E-23 164.4 21.0 173 198-401 37-229 (234)
23 1qo2_A Molecule: N-((5-phospho 99.8 8.6E-20 2.9E-24 171.2 10.3 183 197-401 30-240 (241)
24 3tdn_A FLR symmetric alpha-bet 99.8 2.3E-19 7.9E-24 169.1 7.6 189 195-402 33-247 (247)
25 2zbt_A Pyridoxal biosynthesis 99.7 1E-18 3.5E-23 169.3 8.0 191 200-402 31-256 (297)
26 1h5y_A HISF; histidine biosynt 99.7 3.5E-17 1.2E-21 151.3 16.5 189 194-401 30-244 (253)
27 2v82_A 2-dehydro-3-deoxy-6-pho 99.7 3.3E-17 1.1E-21 150.6 15.7 174 198-402 20-198 (212)
28 3f4w_A Putative hexulose 6 pho 99.6 7.2E-16 2.5E-20 141.1 12.0 183 199-402 15-205 (211)
29 1wa3_A 2-keto-3-deoxy-6-phosph 99.6 2.9E-15 9.8E-20 136.7 15.6 183 178-402 11-198 (205)
30 3o63_A Probable thiamine-phosp 99.6 8.3E-15 2.8E-19 140.0 17.3 180 197-402 43-237 (243)
31 2qjg_A Putative aldolase MJ040 99.6 4.3E-15 1.5E-19 141.4 11.3 191 177-402 26-255 (273)
32 1xi3_A Thiamine phosphate pyro 99.5 1.7E-13 5.9E-18 124.7 15.0 176 198-402 27-208 (215)
33 2agk_A 1-(5-phosphoribosyl)-5- 99.5 4.2E-13 1.4E-17 129.0 14.3 184 196-399 37-254 (260)
34 1jvn_A Glutamine, bifunctional 99.5 3.8E-13 1.3E-17 141.7 14.2 188 196-402 279-544 (555)
35 2fli_A Ribulose-phosphate 3-ep 99.5 1.7E-12 5.8E-17 119.2 16.7 192 198-402 17-216 (220)
36 4gj1_A 1-(5-phosphoribosyl)-5- 99.4 2.2E-12 7.7E-17 122.6 15.5 186 196-400 30-240 (243)
37 1geq_A Tryptophan synthase alp 99.4 7.7E-13 2.6E-17 124.0 11.3 201 175-401 3-238 (248)
38 1xm3_A Thiazole biosynthesis p 99.4 2E-12 6.7E-17 124.3 14.0 206 178-402 4-225 (264)
39 1rpx_A Protein (ribulose-phosp 99.4 8.3E-12 2.9E-16 116.0 17.2 194 198-402 24-225 (230)
40 1gox_A (S)-2-hydroxy-acid oxid 99.4 3.1E-13 1.1E-17 135.6 6.3 190 180-390 114-315 (370)
41 2tps_A Protein (thiamin phosph 99.4 8.7E-12 3E-16 114.8 15.0 176 199-402 33-218 (227)
42 1yad_A Regulatory protein TENI 99.3 3.2E-12 1.1E-16 118.1 11.0 170 203-402 35-210 (221)
43 3ajx_A 3-hexulose-6-phosphate 99.3 1.2E-11 4E-16 112.8 14.2 181 199-402 15-204 (207)
44 3ovp_A Ribulose-phosphate 3-ep 99.3 5.6E-11 1.9E-15 112.2 17.0 197 187-402 8-215 (228)
45 1tqj_A Ribulose-phosphate 3-ep 99.3 3.7E-11 1.3E-15 113.2 15.4 201 187-402 8-219 (230)
46 2yw3_A 4-hydroxy-2-oxoglutarat 99.3 6.4E-11 2.2E-15 110.1 16.4 183 178-402 14-199 (207)
47 1rd5_A Tryptophan synthase alp 99.3 7E-11 2.4E-15 112.3 15.1 192 175-391 16-237 (262)
48 1h1y_A D-ribulose-5-phosphate 99.3 2E-10 6.9E-15 107.2 17.6 190 198-402 20-219 (228)
49 3inp_A D-ribulose-phosphate 3- 99.2 1.4E-10 5E-15 111.1 14.3 201 186-402 30-241 (246)
50 3nl6_A Thiamine biosynthetic b 99.2 8.7E-11 3E-15 123.7 13.9 185 196-402 24-227 (540)
51 1qop_A Tryptophan synthase alp 99.2 2.1E-10 7.1E-15 110.1 15.3 192 175-390 15-240 (268)
52 2p10_A MLL9387 protein; putati 99.2 1E-10 3.5E-15 114.0 12.9 193 201-402 39-276 (286)
53 4e38_A Keto-hydroxyglutarate-a 99.2 1.5E-10 5E-15 110.3 13.6 174 178-390 35-208 (232)
54 1p0k_A Isopentenyl-diphosphate 99.2 1.7E-10 5.8E-15 114.2 13.7 149 196-390 126-286 (349)
55 3khj_A Inosine-5-monophosphate 99.1 7.4E-10 2.5E-14 111.2 16.5 175 200-392 59-244 (361)
56 1wbh_A KHG/KDPG aldolase; lyas 99.1 2.3E-09 8E-14 100.2 18.6 176 178-393 17-193 (214)
57 3ctl_A D-allulose-6-phosphate 99.1 8.1E-10 2.8E-14 104.7 14.4 201 187-402 4-215 (231)
58 2htm_A Thiazole biosynthesis p 99.1 3.9E-10 1.3E-14 109.1 12.0 185 197-401 23-224 (268)
59 3vnd_A TSA, tryptophan synthas 99.1 6.5E-10 2.2E-14 107.6 13.1 193 175-389 16-240 (267)
60 3nav_A Tryptophan synthase alp 99.1 1.1E-09 3.9E-14 106.2 14.5 195 175-389 18-242 (271)
61 2gjl_A Hypothetical protein PA 99.1 3.1E-09 1.1E-13 104.1 17.0 170 200-392 29-209 (328)
62 1vhc_A Putative KHG/KDPG aldol 99.1 2.4E-09 8.4E-14 100.9 15.6 174 178-391 18-192 (224)
63 3jr2_A Hexulose-6-phosphate sy 99.1 1.2E-10 4E-15 108.2 6.4 184 199-402 21-211 (218)
64 1wv2_A Thiazole moeity, thiazo 99.1 5.6E-10 1.9E-14 107.8 11.3 187 196-401 29-233 (265)
65 3bo9_A Putative nitroalkan dio 99.1 5.5E-09 1.9E-13 103.0 18.2 176 200-401 40-224 (326)
66 3ffs_A Inosine-5-monophosphate 99.1 1.6E-09 5.4E-14 110.4 14.7 133 251-392 146-283 (400)
67 1mxs_A KDPG aldolase; 2-keto-3 99.1 1.1E-09 3.8E-14 103.3 12.5 174 178-391 27-201 (225)
68 2ekc_A AQ_1548, tryptophan syn 99.1 3.5E-09 1.2E-13 101.4 16.0 205 176-402 16-254 (262)
69 1tqx_A D-ribulose-5-phosphate 99.0 4.6E-09 1.6E-13 99.4 15.4 198 187-402 9-219 (227)
70 3cu2_A Ribulose-5-phosphate 3- 99.0 1.8E-09 6.2E-14 102.8 12.6 196 186-401 16-233 (237)
71 1ujp_A Tryptophan synthase alp 99.0 4.3E-09 1.5E-13 101.9 15.0 186 176-391 15-236 (271)
72 3ceu_A Thiamine phosphate pyro 99.0 3.3E-10 1.1E-14 104.7 6.5 161 200-394 16-182 (210)
73 3bw2_A 2-nitropropane dioxygen 98.9 6.3E-08 2.1E-12 96.5 20.5 129 251-393 112-246 (369)
74 3lab_A Putative KDPG (2-keto-3 98.9 2E-08 6.9E-13 94.7 15.6 174 178-390 14-193 (217)
75 1w8s_A FBP aldolase, fructose- 98.9 5.7E-08 1.9E-12 93.3 18.6 174 195-402 39-249 (263)
76 2z6i_A Trans-2-enoyl-ACP reduc 98.9 3.4E-08 1.2E-12 97.2 17.2 168 200-393 26-200 (332)
77 4avf_A Inosine-5'-monophosphat 98.9 1.1E-08 3.7E-13 106.4 13.4 186 193-392 162-369 (490)
78 1vrd_A Inosine-5'-monophosphat 98.8 1.4E-08 4.7E-13 104.8 12.0 186 193-390 170-375 (494)
79 3usb_A Inosine-5'-monophosphat 98.8 1.1E-07 3.8E-12 99.3 18.1 190 193-392 189-396 (511)
80 4fo4_A Inosine 5'-monophosphat 98.8 1E-07 3.5E-12 96.0 17.3 176 200-392 60-248 (366)
81 1eep_A Inosine 5'-monophosphat 98.8 3.3E-08 1.1E-12 99.8 12.8 131 252-392 156-293 (404)
82 1to3_A Putative aldolase YIHT; 98.8 2.4E-08 8.3E-13 98.0 11.1 175 197-397 48-271 (304)
83 1q6o_A Humps, 3-keto-L-gulonat 98.7 9.2E-08 3.1E-12 88.4 12.6 188 198-402 14-209 (216)
84 4fxs_A Inosine-5'-monophosphat 98.7 5.2E-08 1.8E-12 101.4 10.8 184 195-392 166-371 (496)
85 3r2g_A Inosine 5'-monophosphat 98.7 6.5E-07 2.2E-11 90.1 18.2 175 200-392 56-236 (361)
86 3glc_A Aldolase LSRF; TIM barr 98.7 2.4E-07 8.2E-12 90.9 14.6 158 209-401 84-274 (295)
87 2nli_A Lactate oxidase; flavoe 98.7 2.8E-07 9.7E-12 92.6 15.2 171 200-390 100-319 (368)
88 1viz_A PCRB protein homolog; s 98.6 9.1E-08 3.1E-12 91.4 9.6 163 199-392 22-218 (240)
89 1jcn_A Inosine monophosphate d 98.6 5.8E-07 2E-11 93.3 15.1 187 195-392 190-395 (514)
90 2f6u_A GGGPS, (S)-3-O-geranylg 98.6 3E-08 1E-12 94.4 4.2 168 199-399 22-231 (234)
91 1zfj_A Inosine monophosphate d 98.6 2.2E-06 7.5E-11 88.1 18.3 187 194-390 167-371 (491)
92 3tha_A Tryptophan synthase alp 98.5 8.3E-07 2.9E-11 85.4 13.8 136 239-389 88-232 (252)
93 3vk5_A MOEO5; TIM barrel, tran 98.4 8.1E-07 2.8E-11 86.8 10.2 177 199-402 55-273 (286)
94 1ypf_A GMP reductase; GUAC, pu 98.4 5.7E-06 2E-10 81.7 15.9 171 200-389 60-244 (336)
95 3cwo_X Beta/alpha-barrel prote 98.3 1.4E-05 4.9E-10 71.5 14.7 182 202-404 17-224 (237)
96 3exr_A RMPD (hexulose-6-phosph 98.3 3E-06 1E-10 79.3 10.6 176 211-402 31-214 (221)
97 3w01_A Heptaprenylglyceryl pho 98.3 2.6E-06 8.8E-11 81.3 10.1 169 201-401 27-228 (235)
98 1ep3_A Dihydroorotate dehydrog 98.3 1.5E-05 5.1E-10 76.5 15.7 162 232-399 91-285 (311)
99 2c6q_A GMP reductase 2; TIM ba 98.3 7.5E-06 2.6E-10 81.8 13.4 128 253-390 122-258 (351)
100 3iwp_A Copper homeostasis prot 98.2 2.1E-05 7.4E-10 76.9 15.7 163 201-383 50-237 (287)
101 3sr7_A Isopentenyl-diphosphate 98.2 4.1E-06 1.4E-10 84.3 10.8 145 198-389 156-312 (365)
102 3vzx_A Heptaprenylglyceryl pho 98.2 2.2E-06 7.6E-11 81.3 8.3 164 202-397 23-221 (228)
103 2qr6_A IMP dehydrogenase/GMP r 98.2 2.3E-05 7.7E-10 78.7 14.7 155 230-392 148-314 (393)
104 1jub_A Dihydroorotate dehydrog 98.1 4.8E-05 1.7E-09 73.5 15.6 153 239-398 93-286 (311)
105 3sgz_A Hydroxyacid oxidase 2; 98.1 2.3E-05 7.9E-10 78.6 13.7 167 199-389 137-306 (352)
106 3vkj_A Isopentenyl-diphosphate 98.1 2.3E-05 8E-10 78.8 12.7 214 126-389 72-301 (368)
107 1kbi_A Cytochrome B2, L-LCR; f 98.0 6.7E-05 2.3E-09 78.5 15.6 178 199-390 209-438 (511)
108 2nzl_A Hydroxyacid oxidase 1; 98.0 5.3E-05 1.8E-09 76.8 14.2 170 200-390 114-342 (392)
109 3oa3_A Aldolase; structural ge 98.0 2.1E-05 7.1E-10 77.0 10.4 161 197-380 74-259 (288)
110 1p4c_A L(+)-mandelate dehydrog 98.0 1.4E-05 4.8E-10 80.5 8.9 101 226-390 213-313 (380)
111 2czd_A Orotidine 5'-phosphate 98.0 7.4E-06 2.5E-10 75.2 6.3 176 198-402 10-203 (208)
112 1me8_A Inosine-5'-monophosphat 97.9 6.6E-05 2.3E-09 78.0 12.3 188 193-390 176-387 (503)
113 2e6f_A Dihydroorotate dehydrog 97.9 5.1E-05 1.8E-09 73.4 10.4 162 230-399 82-289 (314)
114 1f76_A Dihydroorotate dehydrog 97.8 0.00078 2.7E-08 65.8 18.0 132 260-398 164-333 (336)
115 2b7n_A Probable nicotinate-nuc 97.8 6.5E-05 2.2E-09 72.6 9.8 117 252-391 134-264 (273)
116 3gr7_A NADPH dehydrogenase; fl 97.8 0.00066 2.2E-08 67.3 17.1 152 201-405 148-328 (340)
117 3b0p_A TRNA-dihydrouridine syn 97.8 0.00015 5.1E-09 72.1 12.0 151 239-401 57-242 (350)
118 1mzh_A Deoxyribose-phosphate a 97.8 0.00065 2.2E-08 63.4 15.6 161 196-386 19-204 (225)
119 2jbm_A Nicotinate-nucleotide p 97.8 6E-05 2.1E-09 73.9 8.8 114 252-391 149-279 (299)
120 1vcf_A Isopentenyl-diphosphate 97.8 0.00027 9.2E-09 69.4 13.2 178 200-389 78-290 (332)
121 1z41_A YQJM, probable NADH-dep 97.7 0.00089 3E-08 66.0 16.9 153 200-405 147-328 (338)
122 3ngj_A Deoxyribose-phosphate a 97.7 0.00016 5.6E-09 69.0 11.0 157 198-380 44-225 (239)
123 2cu0_A Inosine-5'-monophosphat 97.7 7.1E-05 2.4E-09 77.3 8.7 134 200-390 230-363 (486)
124 3c2e_A Nicotinate-nucleotide p 97.7 6E-05 2E-09 73.7 7.6 123 244-391 142-284 (294)
125 1o4u_A Type II quinolic acid p 97.7 5.7E-05 1.9E-09 73.8 7.1 94 277-391 179-275 (285)
126 2bdq_A Copper homeostasis prot 97.7 0.00033 1.1E-08 66.3 11.8 173 203-395 14-218 (224)
127 2uva_G Fatty acid synthase bet 97.7 0.00034 1.2E-08 83.6 14.7 175 199-392 596-803 (2060)
128 1x1o_A Nicotinate-nucleotide p 97.7 0.00014 4.9E-09 70.9 9.5 88 280-391 185-275 (286)
129 3zen_D Fatty acid synthase; tr 97.6 0.00017 5.8E-09 88.8 11.9 176 200-392 442-654 (3089)
130 1vhn_A Putative flavin oxidore 97.6 0.0019 6.7E-08 62.9 16.7 146 238-401 57-230 (318)
131 1twd_A Copper homeostasis prot 97.6 0.0013 4.5E-08 63.4 15.0 161 201-384 12-198 (256)
132 3tqv_A Nicotinate-nucleotide p 97.6 0.0004 1.4E-08 68.0 11.5 125 238-388 134-274 (287)
133 4ef8_A Dihydroorotate dehydrog 97.6 0.00067 2.3E-08 68.0 13.2 164 228-399 113-322 (354)
134 1ypf_A GMP reductase; GUAC, pu 97.6 0.00051 1.7E-08 67.7 11.9 121 198-320 106-243 (336)
135 3oix_A Putative dihydroorotate 97.5 0.00082 2.8E-08 67.1 13.4 156 238-399 127-320 (345)
136 4af0_A Inosine-5'-monophosphat 97.5 0.001 3.6E-08 70.1 14.1 127 255-391 287-420 (556)
137 1qpo_A Quinolinate acid phosph 97.5 0.00037 1.3E-08 68.0 9.6 93 278-391 182-276 (284)
138 3zwt_A Dihydroorotate dehydrog 97.5 0.00061 2.1E-08 68.5 11.4 131 260-397 175-341 (367)
139 1ub3_A Aldolase protein; schif 97.5 0.00023 7.8E-09 67.0 7.8 158 197-379 19-200 (220)
140 3gnn_A Nicotinate-nucleotide p 97.5 0.00076 2.6E-08 66.3 11.6 125 239-390 146-287 (298)
141 3tdn_A FLR symmetric alpha-bet 97.5 0.00023 7.8E-09 66.5 7.6 88 299-402 39-126 (247)
142 4fxs_A Inosine-5'-monophosphat 97.4 0.00091 3.1E-08 69.6 12.8 121 196-318 229-365 (496)
143 4avf_A Inosine-5'-monophosphat 97.4 0.00071 2.4E-08 70.2 11.8 121 196-318 227-363 (490)
144 1qap_A Quinolinic acid phospho 97.4 0.00034 1.2E-08 68.5 8.4 77 290-390 210-286 (296)
145 3hgj_A Chromate reductase; TIM 97.4 0.0019 6.3E-08 64.1 13.8 137 255-404 159-338 (349)
146 2w6r_A Imidazole glycerol phos 97.4 0.00064 2.2E-08 63.7 9.8 93 197-290 156-252 (266)
147 1jcn_A Inosine monophosphate d 97.4 0.001 3.6E-08 68.9 12.3 121 197-320 254-391 (514)
148 1vrd_A Inosine-5'-monophosphat 97.4 0.0012 4.2E-08 67.8 12.3 119 197-318 236-371 (494)
149 1gte_A Dihydropyrimidine dehyd 97.4 0.0012 4.3E-08 73.8 13.3 161 230-397 625-830 (1025)
150 2i9e_A Triosephosphate isomera 97.3 0.00032 1.1E-08 67.7 7.3 198 176-398 4-245 (259)
151 1ka9_F Imidazole glycerol phos 97.3 0.0007 2.4E-08 62.8 9.2 93 197-290 152-248 (252)
152 3fok_A Uncharacterized protein 97.3 0.0017 5.8E-08 64.0 12.2 170 198-401 72-292 (307)
153 1thf_D HISF protein; thermophI 97.3 0.00077 2.6E-08 62.6 9.3 92 198-290 152-247 (253)
154 3usb_A Inosine-5'-monophosphat 97.3 0.002 7E-08 67.1 12.9 121 196-318 254-390 (511)
155 1eix_A Orotidine 5'-monophosph 97.3 0.00018 6.3E-09 68.0 4.5 188 198-402 25-239 (245)
156 1h5y_A HISF; histidine biosynt 97.2 0.0012 4E-08 60.4 9.3 93 197-290 154-250 (253)
157 3paj_A Nicotinate-nucleotide p 97.2 0.0015 5E-08 64.9 10.3 86 278-387 219-306 (320)
158 3l0g_A Nicotinate-nucleotide p 97.2 0.0014 4.7E-08 64.6 9.9 86 278-387 195-282 (300)
159 3r12_A Deoxyribose-phosphate a 97.2 0.002 6.7E-08 62.3 10.8 159 197-380 59-241 (260)
160 3ndo_A Deoxyribose-phosphate a 97.2 0.0025 8.7E-08 60.4 11.4 158 198-380 30-215 (231)
161 1tv5_A Dhodehase, dihydroorota 97.2 0.0027 9.4E-08 65.4 12.5 45 354-398 372-417 (443)
162 1yya_A Triosephosphate isomera 97.1 0.0011 3.9E-08 63.6 8.7 184 198-398 18-247 (250)
163 2wqp_A Polysialic acid capsule 97.1 0.0043 1.5E-07 62.2 12.8 89 272-383 88-180 (349)
164 1wv2_A Thiazole moeity, thiazo 97.1 0.0014 5E-08 63.3 9.0 73 200-273 146-221 (265)
165 2qr6_A IMP dehydrogenase/GMP r 97.1 0.0065 2.2E-07 60.8 14.1 120 198-320 166-310 (393)
166 4fo4_A Inosine 5'-monophosphat 97.1 0.0039 1.3E-07 62.7 12.3 121 198-320 108-244 (366)
167 2c6q_A GMP reductase 2; TIM ba 97.1 0.0045 1.5E-07 61.6 12.7 118 200-320 120-256 (351)
168 1zfj_A Inosine monophosphate d 97.0 0.004 1.4E-07 63.8 12.2 118 198-318 233-367 (491)
169 2jgq_A Triosephosphate isomera 97.0 0.0027 9.3E-08 60.3 10.0 138 249-398 72-231 (233)
170 3khj_A Inosine-5-monophosphate 97.0 0.0056 1.9E-07 61.3 12.4 118 200-320 107-240 (361)
171 1vyr_A Pentaerythritol tetrani 97.0 0.006 2E-07 61.0 12.4 80 302-399 258-338 (364)
172 2gou_A Oxidoreductase, FMN-bin 97.0 0.0059 2E-07 61.0 12.2 126 256-399 169-337 (365)
173 1vzw_A Phosphoribosyl isomeras 96.9 0.0024 8.2E-08 59.1 8.6 94 189-283 138-238 (244)
174 1vli_A Spore coat polysacchari 96.9 0.0054 1.8E-07 62.2 11.6 89 272-383 98-190 (385)
175 1n7k_A Deoxyribose-phosphate a 96.9 0.023 7.9E-07 53.9 15.3 156 196-379 35-216 (234)
176 3m9y_A Triosephosphate isomera 96.9 0.0021 7.3E-08 61.8 8.1 159 226-395 43-248 (254)
177 3gr7_A NADPH dehydrogenase; fl 96.9 0.0026 8.7E-08 63.1 8.9 92 196-290 228-327 (340)
178 3i65_A Dihydroorotate dehydrog 96.9 0.0041 1.4E-07 63.7 10.6 132 261-398 211-389 (415)
179 3g8r_A Probable spore coat pol 96.9 0.01 3.5E-07 59.5 13.3 93 272-388 75-173 (350)
180 1vr6_A Phospho-2-dehydro-3-deo 96.9 0.0061 2.1E-07 61.1 11.5 188 175-388 105-314 (350)
181 2btm_A TIM, protein (triosepho 96.9 0.0027 9.3E-08 61.0 8.4 161 227-398 43-247 (252)
182 3l5l_A Xenobiotic reductase A; 96.8 0.0058 2E-07 60.9 11.0 137 255-402 165-343 (363)
183 1eep_A Inosine 5'-monophosphat 96.8 0.0059 2E-07 61.4 11.2 119 198-319 153-288 (404)
184 1o5x_A TIM, triosephosphate is 96.8 0.003 1E-07 60.6 8.5 197 177-398 5-245 (248)
185 3m47_A Orotidine 5'-phosphate 96.8 0.012 4.2E-07 55.0 12.7 177 198-402 23-220 (228)
186 3ffs_A Inosine-5-monophosphate 96.8 0.0081 2.8E-07 61.1 12.2 118 200-320 146-279 (400)
187 1vs1_A 3-deoxy-7-phosphoheptul 96.8 0.034 1.2E-06 53.8 15.7 187 175-387 37-245 (276)
188 1ep3_A Dihydroorotate dehydrog 96.8 0.0021 7.2E-08 61.4 7.0 75 198-273 177-275 (311)
189 1pii_A N-(5'phosphoribosyl)ant 96.8 0.016 5.3E-07 60.0 13.9 174 176-383 157-333 (452)
190 2nli_A Lactate oxidase; flavoe 96.7 0.017 5.8E-07 57.9 13.5 93 225-320 216-317 (368)
191 2yc6_A Triosephosphate isomera 96.7 0.0063 2.2E-07 58.6 10.0 193 176-391 5-244 (257)
192 1b9b_A TIM, protein (triosepho 96.7 0.0032 1.1E-07 60.7 7.8 185 198-398 19-251 (255)
193 1mo0_A TIM, triosephosphate is 96.7 0.0028 9.7E-08 61.6 7.5 200 176-399 24-266 (275)
194 3nvt_A 3-deoxy-D-arabino-heptu 96.7 0.013 4.3E-07 59.4 12.5 108 254-385 162-284 (385)
195 1me8_A Inosine-5'-monophosphat 96.7 0.0067 2.3E-07 62.9 10.7 121 197-319 241-384 (503)
196 1aw2_A Triosephosphate isomera 96.7 0.0025 8.6E-08 61.4 6.8 162 227-399 44-250 (256)
197 1r2r_A TIM, triosephosphate is 96.7 0.002 6.9E-08 61.8 6.0 198 176-397 5-245 (248)
198 2r14_A Morphinone reductase; H 96.7 0.023 8E-07 57.0 13.9 127 256-399 174-343 (377)
199 1tre_A Triosephosphate isomera 96.6 0.0026 9E-08 61.2 6.6 140 249-399 78-248 (255)
200 2j27_A Triosephosphate isomera 96.6 0.0044 1.5E-07 59.5 8.0 199 176-398 5-247 (250)
201 1dbt_A Orotidine 5'-phosphate 96.6 0.0031 1E-07 59.2 6.6 189 198-402 14-232 (239)
202 2htm_A Thiazole biosynthesis p 96.6 0.0059 2E-07 59.1 8.4 74 198-273 134-212 (268)
203 1ney_A TIM, triosephosphate is 96.5 0.0039 1.3E-07 59.8 6.9 183 198-397 18-243 (247)
204 2vxn_A Triosephosphate isomera 96.5 0.0071 2.4E-07 58.0 8.7 200 176-398 6-248 (251)
205 1m6j_A TIM, TPI, triosephospha 96.5 0.0041 1.4E-07 60.0 6.9 136 257-399 90-256 (261)
206 2yyu_A Orotidine 5'-phosphate 96.5 0.0067 2.3E-07 57.2 8.1 187 198-402 15-233 (246)
207 3vk5_A MOEO5; TIM barrel, tran 96.5 0.0043 1.5E-07 60.7 6.9 72 201-274 184-262 (286)
208 3qst_A Triosephosphate isomera 96.4 0.0082 2.8E-07 57.7 8.6 195 176-392 6-243 (255)
209 3hgj_A Chromate reductase; TIM 96.4 0.0055 1.9E-07 60.7 7.7 90 198-290 240-338 (349)
210 1qo2_A Molecule: N-((5-phospho 96.4 0.0048 1.7E-07 57.1 6.8 92 190-282 136-238 (241)
211 1vcv_A Probable deoxyribose-ph 96.4 0.02 6.7E-07 54.1 11.0 167 197-386 17-220 (226)
212 3r2g_A Inosine 5'-monophosphat 96.4 0.013 4.4E-07 58.9 10.2 118 198-318 100-230 (361)
213 1kbi_A Cytochrome B2, L-LCR; f 96.4 0.034 1.2E-06 58.1 13.5 91 227-320 332-436 (511)
214 3k30_A Histamine dehydrogenase 96.4 0.007 2.4E-07 64.5 8.5 46 355-400 294-340 (690)
215 3kts_A Glycerol uptake operon 96.3 0.017 6E-07 53.3 9.8 147 206-387 25-182 (192)
216 1icp_A OPR1, 12-oxophytodienoa 96.3 0.04 1.4E-06 55.3 13.3 130 255-399 174-345 (376)
217 3iv3_A Tagatose 1,6-diphosphat 96.3 0.026 9.1E-07 56.1 11.7 130 250-391 112-287 (332)
218 1zco_A 2-dehydro-3-deoxyphosph 96.3 0.03 1E-06 53.7 11.6 88 274-385 73-165 (262)
219 1f76_A Dihydroorotate dehydrog 96.3 0.0037 1.3E-07 61.0 5.2 79 198-277 226-328 (336)
220 3igs_A N-acetylmannosamine-6-p 96.2 0.021 7.1E-07 53.6 9.6 82 200-283 139-226 (232)
221 3th6_A Triosephosphate isomera 96.2 0.0089 3E-07 57.3 7.1 154 226-390 44-238 (249)
222 1jub_A Dihydroorotate dehydrog 96.1 0.003 1E-07 60.8 3.7 74 198-272 173-275 (311)
223 2y88_A Phosphoribosyl isomeras 96.1 0.0089 3E-07 55.0 6.7 84 198-282 150-240 (244)
224 3b0p_A TRNA-dihydrouridine syn 96.1 0.0057 2E-07 60.6 5.7 78 198-277 145-234 (350)
225 3l5l_A Xenobiotic reductase A; 96.1 0.0089 3E-07 59.6 7.0 90 198-290 247-345 (363)
226 2uv8_G Fatty acid synthase sub 96.1 0.061 2.1E-06 64.6 15.1 174 200-392 604-810 (2051)
227 1vcf_A Isopentenyl-diphosphate 96.1 0.04 1.4E-06 53.9 11.4 121 197-320 132-289 (332)
228 3krs_A Triosephosphate isomera 96.1 0.02 6.8E-07 55.6 9.0 194 176-392 25-262 (271)
229 3tjx_A Dihydroorotate dehydrog 96.1 0.091 3.1E-06 51.8 14.1 44 354-397 276-320 (354)
230 2nzl_A Hydroxyacid oxidase 1; 96.0 0.061 2.1E-06 54.3 12.9 93 225-320 239-340 (392)
231 3zwt_A Dihydroorotate dehydrog 96.0 0.019 6.4E-07 57.7 8.8 74 198-272 235-331 (367)
232 3nvt_A 3-deoxy-D-arabino-heptu 95.9 0.15 5.2E-06 51.5 15.3 169 198-385 157-347 (385)
233 1jvn_A Glutamine, bifunctional 95.9 0.018 6.3E-07 60.5 8.8 92 197-290 452-549 (555)
234 3kru_A NADH:flavin oxidoreduct 95.9 0.05 1.7E-06 54.0 11.5 131 256-398 151-321 (343)
235 1xm3_A Thiazole biosynthesis p 95.9 0.02 6.9E-07 54.5 8.1 69 201-272 138-211 (264)
236 3i65_A Dihydroorotate dehydrog 95.8 0.0066 2.2E-07 62.1 4.7 74 198-272 284-378 (415)
237 1vqt_A Orotidine 5'-phosphate 95.8 0.0034 1.2E-07 58.3 2.4 167 198-402 23-210 (213)
238 3vzx_A Heptaprenylglyceryl pho 95.8 0.039 1.3E-06 52.1 9.7 80 201-284 144-225 (228)
239 1yad_A Regulatory protein TENI 95.8 0.077 2.6E-06 48.3 11.3 105 252-387 33-140 (221)
240 1zco_A 2-dehydro-3-deoxyphosph 95.8 0.21 7.1E-06 47.8 14.7 186 177-387 24-230 (262)
241 1mzh_A Deoxyribose-phosphate a 95.7 0.016 5.4E-07 54.0 6.7 65 198-265 133-201 (225)
242 2a4a_A Deoxyribose-phosphate a 95.7 0.02 6.9E-07 55.7 7.7 172 198-386 49-266 (281)
243 1ps9_A 2,4-dienoyl-COA reducta 95.7 0.05 1.7E-06 57.7 11.4 47 355-401 280-327 (671)
244 1z41_A YQJM, probable NADH-dep 95.7 0.022 7.4E-07 56.0 7.6 88 198-288 230-325 (338)
245 3q58_A N-acetylmannosamine-6-p 95.7 0.046 1.6E-06 51.2 9.6 75 200-276 139-218 (229)
246 2zbt_A Pyridoxal biosynthesis 95.7 0.022 7.6E-07 54.5 7.5 89 223-320 192-286 (297)
247 3f4w_A Putative hexulose 6 pho 95.6 0.016 5.4E-07 52.3 5.8 74 198-274 115-193 (211)
248 3q94_A Fructose-bisphosphate a 95.5 0.42 1.4E-05 46.6 16.1 138 238-388 79-240 (288)
249 2z6i_A Trans-2-enoyl-ACP reduc 95.5 0.029 1E-06 54.8 8.0 95 160-274 99-197 (332)
250 2v82_A 2-dehydro-3-deoxy-6-pho 95.5 0.064 2.2E-06 48.4 9.6 101 253-383 24-127 (212)
251 1y0e_A Putative N-acetylmannos 95.4 0.025 8.5E-07 51.4 6.6 75 198-275 128-211 (223)
252 3daq_A DHDPS, dihydrodipicolin 95.4 1.3 4.6E-05 42.4 19.1 165 201-391 27-214 (292)
253 1vkf_A Glycerol uptake operon 95.4 0.17 5.7E-06 46.7 11.9 118 231-385 50-178 (188)
254 1viz_A PCRB protein homolog; s 95.3 0.025 8.4E-07 53.8 6.4 75 198-276 140-218 (240)
255 1wa3_A 2-keto-3-deoxy-6-phosph 95.3 0.13 4.6E-06 46.0 11.0 113 240-383 13-130 (205)
256 1vhn_A Putative flavin oxidore 95.3 0.031 1.1E-06 54.3 7.2 78 197-277 140-222 (318)
257 4ab4_A Xenobiotic reductase B; 95.3 0.11 3.8E-06 51.9 11.4 122 255-399 160-323 (362)
258 1tv5_A Dhodehase, dihydroorota 95.3 0.022 7.7E-07 58.6 6.4 74 198-272 312-406 (443)
259 3qze_A DHDPS, dihydrodipicolin 95.3 1.2 4.1E-05 43.4 18.5 165 201-391 48-234 (314)
260 2wqp_A Polysialic acid capsule 95.3 0.38 1.3E-05 48.1 15.1 186 176-387 19-237 (349)
261 2vc6_A MOSA, dihydrodipicolina 95.2 0.82 2.8E-05 43.9 17.0 164 200-389 24-210 (292)
262 3oix_A Putative dihydroorotate 95.2 0.014 4.8E-07 58.2 4.6 79 193-272 200-309 (345)
263 1yxy_A Putative N-acetylmannos 95.2 0.012 4.1E-07 54.1 3.8 71 202-274 145-221 (234)
264 3flu_A DHDPS, dihydrodipicolin 95.2 1.4 4.9E-05 42.4 18.6 165 201-391 32-218 (297)
265 2e6f_A Dihydroorotate dehydrog 95.2 0.022 7.6E-07 54.8 5.8 74 198-272 175-277 (314)
266 2v5j_A 2,4-dihydroxyhept-2-ENE 95.2 0.68 2.3E-05 44.7 16.2 177 198-386 49-260 (287)
267 3qja_A IGPS, indole-3-glycerol 95.1 0.046 1.6E-06 52.6 7.8 94 177-285 163-259 (272)
268 3cwo_X Beta/alpha-barrel prote 95.1 0.099 3.4E-06 46.3 9.4 94 197-291 130-227 (237)
269 1vs1_A 3-deoxy-7-phosphoheptul 95.1 0.14 4.9E-06 49.4 11.2 89 273-385 87-180 (276)
270 1geq_A Tryptophan synthase alp 95.1 0.046 1.6E-06 50.5 7.3 76 198-274 144-226 (248)
271 1gvf_A Tagatose-bisphosphate a 95.0 0.85 2.9E-05 44.4 16.4 138 238-388 73-236 (286)
272 3lmz_A Putative sugar isomeras 95.0 0.68 2.3E-05 42.3 15.1 193 196-399 29-245 (257)
273 2h9a_B CO dehydrogenase/acetyl 94.9 0.22 7.6E-06 48.9 12.2 147 175-327 45-212 (310)
274 3tak_A DHDPS, dihydrodipicolin 94.9 2 6.7E-05 41.2 18.7 166 200-391 25-212 (291)
275 2f6u_A GGGPS, (S)-3-O-geranylg 94.9 0.047 1.6E-06 51.7 7.1 73 197-274 146-224 (234)
276 2nv1_A Pyridoxal biosynthesis 94.9 0.039 1.3E-06 53.3 6.6 113 198-320 134-286 (305)
277 3sgz_A Hydroxyacid oxidase 2; 94.9 0.12 4.1E-06 51.7 10.2 93 162-272 207-305 (352)
278 2r8w_A AGR_C_1641P; APC7498, d 94.9 1.5 5.2E-05 43.0 18.1 165 200-390 58-248 (332)
279 1vr6_A Phospho-2-dehydro-3-deo 94.8 0.19 6.5E-06 50.3 11.5 105 255-383 127-247 (350)
280 1xi3_A Thiamine phosphate pyro 94.8 0.77 2.6E-05 40.8 14.6 103 252-385 30-136 (215)
281 1ea0_A Glutamate synthase [NAD 94.8 0.11 3.7E-06 60.5 10.8 114 271-389 974-1098(1479)
282 4ef8_A Dihydroorotate dehydrog 94.8 0.032 1.1E-06 55.8 5.8 81 193-273 200-311 (354)
283 2rfg_A Dihydrodipicolinate syn 94.7 1.8 6.1E-05 41.7 17.7 164 200-389 24-209 (297)
284 3tfx_A Orotidine 5'-phosphate 94.7 0.21 7E-06 48.0 10.9 150 223-402 42-234 (259)
285 1vyr_A Pentaerythritol tetrani 94.6 0.077 2.6E-06 52.9 8.1 78 198-277 252-332 (364)
286 3s5o_A 4-hydroxy-2-oxoglutarat 94.6 2.1 7.2E-05 41.4 18.1 165 201-390 39-227 (307)
287 2gjl_A Hypothetical protein PA 94.6 0.074 2.5E-06 51.6 7.7 94 161-274 108-207 (328)
288 1p0k_A Isopentenyl-diphosphate 94.6 0.092 3.2E-06 51.5 8.4 73 200-273 192-285 (349)
289 3l5a_A NADH/flavin oxidoreduct 94.6 0.068 2.3E-06 54.5 7.7 50 355-405 318-367 (419)
290 3na8_A Putative dihydrodipicol 94.6 1.6 5.4E-05 42.6 17.2 165 200-390 48-235 (315)
291 3aty_A Tcoye, prostaglandin F2 94.6 0.1 3.4E-06 52.5 8.8 44 355-399 307-351 (379)
292 2ehh_A DHDPS, dihydrodipicolin 94.6 2 6.9E-05 41.2 17.7 164 200-389 24-210 (294)
293 2qjg_A Putative aldolase MJ040 94.5 0.074 2.5E-06 49.9 7.4 88 177-274 146-243 (273)
294 2v5b_A Triosephosphate isomera 94.5 0.15 5.1E-06 48.7 9.4 199 176-396 6-239 (244)
295 4gj1_A 1-(5-phosphoribosyl)-5- 94.5 0.13 4.5E-06 48.3 9.0 61 334-402 62-122 (243)
296 1rd5_A Tryptophan synthase alp 94.4 0.11 3.8E-06 48.7 8.3 73 199-272 155-234 (262)
297 1gte_A Dihydropyrimidine dehyd 94.4 0.07 2.4E-06 59.7 8.0 75 198-273 716-821 (1025)
298 3bw2_A 2-nitropropane dioxygen 94.4 0.066 2.3E-06 53.0 7.0 73 201-274 156-243 (369)
299 1vli_A Spore coat polysacchari 94.4 1.3 4.6E-05 44.7 16.6 187 176-387 28-249 (385)
300 1xky_A Dihydrodipicolinate syn 94.4 1.6 5.5E-05 42.1 16.7 163 200-388 36-220 (301)
301 4djd_D C/Fe-SP, corrinoid/iron 94.4 0.14 4.9E-06 50.6 9.3 165 175-343 52-235 (323)
302 4adt_A Pyridoxine biosynthetic 94.3 0.046 1.6E-06 53.5 5.5 87 225-320 194-286 (297)
303 3si9_A DHDPS, dihydrodipicolin 94.3 2.3 8E-05 41.4 17.7 166 200-391 46-234 (315)
304 4e38_A Keto-hydroxyglutarate-a 94.3 0.47 1.6E-05 44.8 12.2 154 214-402 11-170 (232)
305 2pgw_A Muconate cycloisomerase 94.3 0.18 6.2E-06 49.9 9.9 93 198-295 205-299 (384)
306 1ofd_A Ferredoxin-dependent gl 94.2 0.12 4E-06 60.4 9.5 113 272-390 1010-1134(1520)
307 2rdx_A Mandelate racemase/muco 94.2 0.27 9.2E-06 48.6 11.0 90 198-295 204-295 (379)
308 4af0_A Inosine-5'-monophosphat 94.1 0.33 1.1E-05 51.3 11.9 117 198-316 281-413 (556)
309 1mdl_A Mandelate racemase; iso 94.1 0.19 6.4E-06 49.3 9.5 93 198-295 204-298 (359)
310 4dbe_A Orotidine 5'-phosphate 94.0 0.39 1.3E-05 44.8 11.0 173 198-402 14-205 (222)
311 2fiq_A Putative tagatose 6-pho 94.0 0.55 1.9E-05 48.1 13.0 142 238-390 75-287 (420)
312 3w01_A Heptaprenylglyceryl pho 94.0 0.11 3.7E-06 49.4 7.2 61 210-274 159-220 (235)
313 3bo9_A Putative nitroalkan dio 94.0 0.069 2.3E-06 52.2 6.1 93 160-272 113-209 (326)
314 3s6d_A Putative triosephosphat 94.0 0.033 1.1E-06 55.0 3.7 143 249-402 131-307 (310)
315 3n9r_A Fructose-bisphosphate a 93.9 1.6 5.6E-05 42.9 15.7 139 238-388 73-259 (307)
316 1gox_A (S)-2-hydroxy-acid oxid 93.9 0.15 5.2E-06 50.8 8.6 71 201-272 237-313 (370)
317 3cpr_A Dihydrodipicolinate syn 93.8 4.1 0.00014 39.3 18.4 163 200-390 40-224 (304)
318 3m5v_A DHDPS, dihydrodipicolin 93.8 3.4 0.00012 39.7 17.6 165 200-390 31-218 (301)
319 2ovl_A Putative racemase; stru 93.7 0.26 9E-06 48.5 9.8 98 198-302 206-305 (371)
320 2isw_A Putative fructose-1,6-b 93.7 2 6.9E-05 42.5 16.0 138 238-387 74-258 (323)
321 3kts_A Glycerol uptake operon 93.7 0.04 1.4E-06 50.9 3.5 62 203-270 120-181 (192)
322 3eb2_A Putative dihydrodipicol 93.7 1 3.6E-05 43.4 13.7 166 200-391 28-215 (300)
323 3ru6_A Orotidine 5'-phosphate 93.6 0.38 1.3E-05 47.2 10.6 162 211-402 50-248 (303)
324 3o07_A Pyridoxine biosynthesis 93.6 0.28 9.4E-06 48.0 9.4 87 224-320 184-277 (291)
325 2ojp_A DHDPS, dihydrodipicolin 93.6 2.1 7.2E-05 41.0 15.7 164 200-389 25-210 (292)
326 3p6l_A Sugar phosphate isomera 93.6 1.8 6.3E-05 39.3 14.6 191 197-398 22-248 (262)
327 2yci_X 5-methyltetrahydrofolat 93.6 0.72 2.4E-05 44.3 12.2 160 175-343 8-190 (271)
328 2vws_A YFAU, 2-keto-3-deoxy su 93.5 1.2 4.2E-05 42.2 13.8 177 198-386 28-239 (267)
329 1o5k_A DHDPS, dihydrodipicolin 93.5 2.5 8.4E-05 40.9 16.2 166 201-389 37-225 (306)
330 2wkj_A N-acetylneuraminate lya 93.5 2.8 9.5E-05 40.5 16.4 162 200-388 35-219 (303)
331 3l21_A DHDPS, dihydrodipicolin 93.4 1.6 5.5E-05 42.2 14.6 161 200-388 39-221 (304)
332 3gka_A N-ethylmaleimide reduct 93.4 0.12 4.1E-06 51.7 6.7 44 355-399 287-331 (361)
333 1f6k_A N-acetylneuraminate lya 93.4 5.8 0.0002 37.9 18.5 160 200-386 27-209 (293)
334 3i4k_A Muconate lactonizing en 93.3 0.53 1.8E-05 46.8 11.3 119 163-295 183-303 (383)
335 1wbh_A KHG/KDPG aldolase; lyas 93.3 1.2 4.2E-05 41.0 13.0 123 229-383 9-135 (214)
336 2gou_A Oxidoreductase, FMN-bin 93.3 0.15 5.2E-06 50.8 7.3 76 198-277 251-331 (365)
337 1rvk_A Isomerase/lactonizing e 93.3 0.39 1.3E-05 47.4 10.2 120 163-296 189-311 (382)
338 1qop_A Tryptophan synthase alp 93.3 0.21 7.2E-06 47.4 8.0 45 227-272 194-238 (268)
339 3qfe_A Putative dihydrodipicol 93.3 3.6 0.00012 40.1 16.9 167 200-391 35-227 (318)
340 1p4c_A L(+)-mandelate dehydrog 93.3 0.075 2.6E-06 53.3 5.0 72 200-272 236-311 (380)
341 2qgy_A Enolase from the enviro 93.3 0.32 1.1E-05 48.4 9.6 94 198-296 209-304 (391)
342 2tps_A Protein (thiamin phosph 93.2 0.12 4E-06 46.8 5.9 73 198-273 125-205 (227)
343 3kws_A Putative sugar isomeras 93.2 2.8 9.7E-05 38.5 15.4 194 196-399 37-275 (287)
344 3vnd_A TSA, tryptophan synthas 93.2 0.26 8.9E-06 47.3 8.5 73 198-272 160-239 (267)
345 3a5f_A Dihydrodipicolinate syn 93.1 2 7E-05 41.1 14.7 165 199-389 24-210 (291)
346 2ftp_A Hydroxymethylglutaryl-C 93.1 2.4 8.1E-05 40.8 15.2 166 195-381 28-232 (302)
347 2yw3_A 4-hydroxy-2-oxoglutarat 93.1 0.15 5.2E-06 46.7 6.4 83 198-286 113-196 (207)
348 1w8s_A FBP aldolase, fructose- 93.0 0.42 1.4E-05 45.4 9.6 82 198-285 157-248 (263)
349 2yxg_A DHDPS, dihydrodipicolin 93.0 5.1 0.00017 38.2 17.3 162 200-389 24-208 (289)
350 1nu5_A Chloromuconate cycloiso 93.0 0.41 1.4E-05 47.0 9.8 93 198-295 203-297 (370)
351 3d0c_A Dihydrodipicolinate syn 93.0 2.5 8.7E-05 41.0 15.3 163 200-389 36-219 (314)
352 2v9d_A YAGE; dihydrodipicolini 92.9 3 0.0001 41.1 16.0 166 200-388 55-243 (343)
353 3o63_A Probable thiamine-phosp 92.9 1.6 5.3E-05 41.2 13.3 106 252-387 47-165 (243)
354 3e96_A Dihydrodipicolinate syn 92.9 1.9 6.5E-05 41.9 14.3 166 200-390 36-220 (316)
355 3ks6_A Glycerophosphoryl diest 92.9 4.6 0.00016 37.4 16.5 140 162-320 87-236 (250)
356 1p1x_A Deoxyribose-phosphate a 92.8 0.066 2.2E-06 51.5 3.7 123 252-386 89-239 (260)
357 1sjd_A N-acylamino acid racema 92.8 0.71 2.4E-05 45.3 11.2 121 162-297 171-293 (368)
358 4ab4_A Xenobiotic reductase B; 92.8 0.1 3.5E-06 52.2 5.2 74 198-277 243-317 (362)
359 3h5d_A DHDPS, dihydrodipicolin 92.8 3.7 0.00013 39.8 16.2 162 198-386 29-213 (311)
360 1vhc_A Putative KHG/KDPG aldol 92.8 1.5 5.2E-05 40.7 12.9 125 228-383 9-136 (224)
361 4dwd_A Mandelate racemase/muco 92.8 0.38 1.3E-05 48.2 9.4 120 163-298 180-300 (393)
362 3qvq_A Phosphodiesterase OLEI0 92.8 3.7 0.00013 38.1 15.6 138 162-320 99-242 (252)
363 3nav_A Tryptophan synthase alp 92.7 0.31 1E-05 47.0 8.3 44 228-272 198-241 (271)
364 3pm6_A Putative fructose-bisph 92.7 3.5 0.00012 40.6 15.8 140 238-388 81-255 (306)
365 3ta6_A Triosephosphate isomera 92.7 0.41 1.4E-05 46.3 9.0 161 227-398 47-253 (267)
366 3tsm_A IGPS, indole-3-glycerol 92.6 0.19 6.5E-06 48.5 6.7 89 176-279 169-260 (272)
367 2agk_A 1-(5-phosphoribosyl)-5- 92.6 0.13 4.5E-06 48.9 5.5 88 196-286 156-258 (260)
368 1dxe_A 2-dehydro-3-deoxy-galac 92.6 2 6.9E-05 40.4 13.7 177 198-386 29-239 (256)
369 3ozy_A Putative mandelate race 92.6 0.43 1.5E-05 47.6 9.4 118 163-294 184-304 (389)
370 2og9_A Mandelate racemase/muco 92.6 0.4 1.4E-05 47.7 9.2 96 198-300 222-319 (393)
371 3gka_A N-ethylmaleimide reduct 92.5 0.13 4.6E-06 51.4 5.6 74 198-277 251-325 (361)
372 2o55_A Putative glycerophospho 92.5 4.1 0.00014 37.8 15.5 130 176-319 108-247 (258)
373 2oz8_A MLL7089 protein; struct 92.5 0.93 3.2E-05 45.0 11.7 92 198-298 205-301 (389)
374 1vc4_A Indole-3-glycerol phosp 92.4 0.62 2.1E-05 44.1 9.9 91 288-397 45-147 (254)
375 3l0g_A Nicotinate-nucleotide p 92.4 0.29 9.9E-06 48.1 7.7 134 159-316 132-279 (300)
376 2r14_A Morphinone reductase; H 92.4 0.17 5.7E-06 50.8 6.1 78 198-277 256-337 (377)
377 3sz8_A 2-dehydro-3-deoxyphosph 92.3 1.5 5.2E-05 42.7 12.6 143 227-388 80-245 (285)
378 3luf_A Two-component system re 92.3 3.4 0.00011 38.1 14.6 91 284-397 144-236 (259)
379 3tqv_A Nicotinate-nucleotide p 92.2 0.45 1.5E-05 46.4 8.7 134 159-316 123-270 (287)
380 1qwg_A PSL synthase;, (2R)-pho 92.1 2.1 7.1E-05 41.0 13.1 116 254-379 91-222 (251)
381 2hmc_A AGR_L_411P, dihydrodipi 92.1 6.9 0.00024 38.6 17.4 163 200-388 50-236 (344)
382 2hzg_A Mandelate racemase/muco 92.1 0.47 1.6E-05 47.3 9.0 92 198-294 210-304 (401)
383 2otd_A Glycerophosphodiester p 92.1 3.6 0.00012 37.9 14.4 139 162-320 96-239 (247)
384 1o94_A Tmadh, trimethylamine d 92.0 0.25 8.6E-06 53.1 7.4 45 355-399 291-336 (729)
385 2hsa_B 12-oxophytodienoate red 91.9 0.18 6.1E-06 51.0 5.7 44 355-399 319-363 (402)
386 2p8b_A Mandelate racemase/muco 91.8 0.42 1.4E-05 46.9 8.2 94 198-296 200-296 (369)
387 3qz6_A HPCH/HPAI aldolase; str 91.8 5.3 0.00018 37.8 15.6 172 202-385 29-237 (261)
388 3aty_A Tcoye, prostaglandin F2 91.8 0.32 1.1E-05 48.8 7.4 75 198-277 267-345 (379)
389 2pz0_A Glycerophosphoryl diest 91.7 4.9 0.00017 37.2 15.1 138 162-319 101-242 (252)
390 3lab_A Putative KDPG (2-keto-3 91.7 1.2 4.3E-05 41.6 10.8 128 240-402 16-155 (217)
391 1ujp_A Tryptophan synthase alp 91.7 0.48 1.6E-05 45.4 8.2 55 227-284 191-249 (271)
392 3mqt_A Mandelate racemase/muco 91.7 0.39 1.3E-05 48.0 7.9 121 163-298 189-311 (394)
393 2qde_A Mandelate racemase/muco 91.6 0.6 2.1E-05 46.4 9.2 93 198-295 204-298 (397)
394 1tkk_A Similar to chloromucona 91.6 0.71 2.4E-05 45.2 9.5 120 163-296 174-297 (366)
395 1r0m_A N-acylamino acid racema 91.6 0.75 2.6E-05 45.3 9.7 120 162-297 178-299 (375)
396 3ve9_A Orotidine-5'-phosphate 91.6 0.35 1.2E-05 44.9 6.9 171 198-402 12-198 (215)
397 3ldv_A Orotidine 5'-phosphate 91.5 0.34 1.2E-05 46.3 6.9 156 223-402 64-252 (255)
398 2nql_A AGR_PAT_674P, isomerase 91.5 0.26 8.9E-06 48.9 6.4 91 198-293 223-314 (388)
399 2pcq_A Putative dihydrodipicol 91.5 4.5 0.00015 38.5 14.9 160 201-390 23-201 (283)
400 1o4u_A Type II quinolic acid p 91.5 0.43 1.5E-05 46.4 7.7 87 225-316 177-268 (285)
401 2yzr_A Pyridoxal biosynthesis 91.5 0.36 1.2E-05 48.0 7.2 84 227-320 229-319 (330)
402 3to5_A CHEY homolog; alpha(5)b 91.4 2.7 9.3E-05 35.6 11.9 96 280-397 28-124 (134)
403 1ydn_A Hydroxymethylglutaryl-C 91.4 2 7E-05 40.9 12.3 167 197-383 26-230 (295)
404 2ps2_A Putative mandelate race 91.4 0.6 2E-05 45.9 8.8 92 198-297 205-299 (371)
405 1rvg_A Fructose-1,6-bisphospha 91.4 2.4 8.3E-05 41.6 12.9 138 238-387 71-256 (305)
406 1chr_A Chloromuconate cycloiso 91.4 1.1 3.6E-05 44.3 10.6 119 163-295 177-297 (370)
407 2o56_A Putative mandelate race 91.2 0.49 1.7E-05 47.1 8.1 117 164-294 205-323 (407)
408 3kxq_A Triosephosphate isomera 91.2 0.53 1.8E-05 45.7 8.0 193 176-392 27-264 (275)
409 3dg3_A Muconate cycloisomerase 91.2 0.55 1.9E-05 46.4 8.3 119 163-295 174-293 (367)
410 3my9_A Muconate cycloisomerase 91.2 0.8 2.7E-05 45.4 9.5 118 163-294 180-299 (377)
411 3mkc_A Racemase; metabolic pro 91.1 0.53 1.8E-05 47.1 8.2 121 163-298 194-316 (394)
412 3sr7_A Isopentenyl-diphosphate 90.9 0.64 2.2E-05 46.6 8.5 72 201-272 221-311 (365)
413 2gl5_A Putative dehydratase pr 90.9 0.56 1.9E-05 46.7 8.1 118 163-294 207-326 (410)
414 3kru_A NADH:flavin oxidoreduct 90.9 0.21 7.1E-06 49.6 4.9 78 198-277 231-316 (343)
415 3jva_A Dipeptide epimerase; en 90.9 0.64 2.2E-05 45.6 8.4 121 163-297 172-294 (354)
416 3r4e_A Mandelate racemase/muco 90.8 0.47 1.6E-05 47.9 7.5 119 164-296 210-330 (418)
417 1tzz_A Hypothetical protein L1 90.8 0.66 2.2E-05 46.1 8.5 105 198-307 225-338 (392)
418 2poz_A Putative dehydratase; o 90.8 0.51 1.7E-05 46.8 7.6 119 163-295 188-308 (392)
419 3txv_A Probable tagatose 6-pho 90.8 4.7 0.00016 41.6 14.9 177 202-389 37-294 (450)
420 3fs2_A 2-dehydro-3-deoxyphosph 90.7 1.6 5.5E-05 42.8 10.9 141 227-388 101-264 (298)
421 3ajx_A 3-hexulose-6-phosphate 90.7 0.18 6E-06 45.2 3.8 79 198-279 115-197 (207)
422 3stp_A Galactonate dehydratase 90.7 0.49 1.7E-05 47.8 7.6 128 163-304 219-348 (412)
423 3paj_A Nicotinate-nucleotide p 90.6 0.96 3.3E-05 44.8 9.4 134 159-316 156-303 (320)
424 1v5x_A PRA isomerase, phosphor 90.6 7 0.00024 35.8 14.7 171 198-401 10-193 (203)
425 3vkj_A Isopentenyl-diphosphate 90.6 0.72 2.5E-05 46.2 8.6 72 200-272 201-300 (368)
426 2q02_A Putative cytoplasmic pr 90.6 5.2 0.00018 36.1 13.8 129 253-388 90-248 (272)
427 3tr2_A Orotidine 5'-phosphate 90.6 0.8 2.7E-05 43.2 8.4 169 212-402 35-234 (239)
428 4e5t_A Mandelate racemase / mu 90.5 0.73 2.5E-05 46.2 8.6 93 198-297 223-317 (404)
429 1vd6_A Glycerophosphoryl diest 90.5 4.7 0.00016 36.7 13.4 134 162-319 81-217 (224)
430 1nsj_A PRAI, phosphoribosyl an 90.5 10 0.00035 34.7 17.0 175 198-401 11-199 (205)
431 1qpo_A Quinolinate acid phosph 90.5 1 3.4E-05 43.7 9.2 139 159-316 119-269 (284)
432 3rr1_A GALD, putative D-galact 90.5 0.67 2.3E-05 46.7 8.3 93 198-295 193-287 (405)
433 3dip_A Enolase; structural gen 90.4 1.6 5.4E-05 43.9 10.9 118 163-294 202-322 (410)
434 3i6e_A Muconate cycloisomerase 90.4 1.2 4.1E-05 44.3 10.0 117 163-294 182-300 (385)
435 3q45_A Mandelate racemase/muco 90.4 1.1 3.6E-05 44.4 9.5 120 163-296 173-294 (368)
436 2ox4_A Putative mandelate race 90.4 0.36 1.2E-05 48.0 6.2 117 164-294 199-317 (403)
437 3v3w_A Starvation sensing prot 90.3 0.56 1.9E-05 47.5 7.5 119 164-296 216-336 (424)
438 2zad_A Muconate cycloisomerase 90.3 1.2 4.1E-05 43.2 9.7 118 163-296 172-293 (345)
439 3eez_A Putative mandelate race 90.3 0.76 2.6E-05 45.6 8.4 91 198-296 204-296 (378)
440 3gk0_A PNP synthase, pyridoxin 90.3 9.2 0.00031 37.1 15.5 181 196-389 52-248 (278)
441 1ps9_A 2,4-dienoyl-COA reducta 90.2 0.52 1.8E-05 49.9 7.6 160 198-385 229-404 (671)
442 3toy_A Mandelate racemase/muco 90.2 0.96 3.3E-05 45.1 9.1 123 163-301 202-326 (383)
443 1m5w_A Pyridoxal phosphate bio 90.2 9.4 0.00032 36.4 15.3 180 197-389 25-220 (243)
444 3fs2_A 2-dehydro-3-deoxyphosph 90.1 1.5 5.2E-05 42.9 10.2 86 274-383 98-188 (298)
445 2hsa_B 12-oxophytodienoate red 90.1 0.32 1.1E-05 49.2 5.6 78 198-277 261-357 (402)
446 2qkf_A 3-deoxy-D-manno-octulos 90.0 1.4 4.7E-05 42.6 9.7 164 199-383 31-235 (280)
447 2b7n_A Probable nicotinate-nuc 89.9 1.4 4.6E-05 42.3 9.6 140 159-317 106-258 (273)
448 3bjs_A Mandelate racemase/muco 89.9 0.72 2.5E-05 46.6 8.0 92 198-294 244-338 (428)
449 3sjn_A Mandelate racemase/muco 89.8 0.61 2.1E-05 46.2 7.2 92 198-294 209-302 (374)
450 4e4u_A Mandalate racemase/muco 89.7 1 3.5E-05 45.3 9.0 117 163-293 190-308 (412)
451 3sbf_A Mandelate racemase / mu 89.7 0.71 2.4E-05 46.2 7.7 118 164-295 191-310 (401)
452 2pp0_A L-talarate/galactarate 89.7 0.99 3.4E-05 45.0 8.7 97 198-301 235-333 (398)
453 3mwc_A Mandelate racemase/muco 89.6 1.3 4.5E-05 44.4 9.6 119 162-295 193-313 (400)
454 2gdq_A YITF; mandelate racemas 89.6 0.71 2.4E-05 45.8 7.6 91 199-294 200-293 (382)
455 3ddm_A Putative mandelate race 89.6 1 3.4E-05 45.1 8.7 119 163-297 188-309 (392)
456 3sz8_A 2-dehydro-3-deoxyphosph 89.6 1.2 4E-05 43.5 8.8 86 274-383 77-167 (285)
457 1nvm_A HOA, 4-hydroxy-2-oxoval 89.6 3.7 0.00013 40.2 12.6 167 197-381 30-223 (345)
458 3gnn_A Nicotinate-nucleotide p 89.5 1.4 4.8E-05 43.2 9.4 134 160-317 135-282 (298)
459 3b4u_A Dihydrodipicolinate syn 89.5 15 0.00051 35.1 18.1 162 200-388 27-216 (294)
460 3tj4_A Mandelate racemase; eno 89.5 0.93 3.2E-05 44.9 8.3 117 163-293 186-304 (372)
461 1icp_A OPR1, 12-oxophytodienoa 89.4 0.28 9.7E-06 49.0 4.5 76 199-277 258-339 (376)
462 3glc_A Aldolase LSRF; TIM barr 89.3 1.4 4.7E-05 43.0 9.2 94 177-284 172-273 (295)
463 4g1k_A Triosephosphate isomera 89.3 0.96 3.3E-05 43.8 7.9 193 176-392 27-263 (272)
464 3hzh_A Chemotaxis response reg 89.3 5.6 0.00019 32.8 11.9 98 277-397 49-148 (157)
465 2i1o_A Nicotinate phosphoribos 89.2 0.67 2.3E-05 46.9 7.1 100 277-390 197-304 (398)
466 3ceu_A Thiamine phosphate pyro 89.2 0.49 1.7E-05 43.0 5.6 100 252-387 17-117 (210)
467 1izc_A Macrophomate synthase i 89.0 4.2 0.00015 40.2 12.6 175 198-386 52-276 (339)
468 3ugv_A Enolase; enzyme functio 89.0 1 3.4E-05 45.0 8.2 123 163-301 208-332 (390)
469 3vcn_A Mannonate dehydratase; 89.0 0.53 1.8E-05 47.7 6.2 119 163-295 216-336 (425)
470 3dgb_A Muconate cycloisomerase 88.9 1.4 4.9E-05 43.7 9.3 119 163-295 183-303 (382)
471 1h1y_A D-ribulose-5-phosphate 88.8 0.6 2.1E-05 42.9 5.9 75 201-277 127-210 (228)
472 3fcp_A L-Ala-D/L-Glu epimerase 88.7 1.6 5.4E-05 43.3 9.4 119 163-295 182-302 (381)
473 3rcy_A Mandelate racemase/muco 88.7 0.81 2.8E-05 46.5 7.4 117 163-293 192-310 (433)
474 4dxk_A Mandelate racemase / mu 88.7 1.7 5.9E-05 43.4 9.7 117 164-294 200-318 (400)
475 2qq6_A Mandelate racemase/muco 88.5 0.9 3.1E-05 45.4 7.5 119 163-295 199-319 (410)
476 3ro6_B Putative chloromuconate 88.5 0.46 1.6E-05 46.7 5.2 120 163-296 173-295 (356)
477 3eul_A Possible nitrate/nitrit 88.4 6.7 0.00023 31.8 11.6 87 278-383 29-117 (152)
478 3gd6_A Muconate cycloisomerase 88.3 1.4 4.8E-05 43.9 8.7 91 198-295 202-296 (391)
479 2zc8_A N-acylamino acid racema 88.2 1.4 4.9E-05 43.1 8.5 120 162-297 171-292 (369)
480 3dx5_A Uncharacterized protein 88.2 3.9 0.00013 37.4 11.1 120 197-316 15-170 (286)
481 3r0u_A Enzyme of enolase super 87.9 2.1 7.1E-05 42.6 9.6 120 163-296 175-298 (379)
482 1mxs_A KDPG aldolase; 2-keto-3 87.9 1.3 4.3E-05 41.3 7.5 80 197-286 127-217 (225)
483 2qdd_A Mandelate racemase/muco 87.7 2.3 7.9E-05 41.8 9.8 88 200-296 207-296 (378)
484 3tml_A 2-dehydro-3-deoxyphosph 87.7 3.9 0.00013 39.8 11.1 164 199-383 33-241 (288)
485 3go2_A Putative L-alanine-DL-g 87.6 1.8 6E-05 43.5 8.9 117 163-297 202-319 (409)
486 1qwg_A PSL synthase;, (2R)-pho 87.6 1.5 5E-05 42.1 7.9 117 257-391 34-182 (251)
487 3f6c_A Positive transcription 87.5 4.3 0.00015 32.0 9.6 105 277-402 14-119 (134)
488 3l12_A Putative glycerophospho 87.5 5.7 0.00019 38.0 12.2 133 176-320 143-300 (313)
489 3ble_A Citramalate synthase fr 87.4 2.7 9.3E-05 41.2 10.0 111 197-316 41-189 (337)
490 3ngj_A Deoxyribose-phosphate a 87.4 2.4 8.3E-05 40.2 9.2 112 202-316 100-229 (239)
491 1tmy_A CHEY protein, TMY; chem 87.3 8.4 0.00029 29.6 12.1 95 279-397 17-112 (120)
492 1tqx_A D-ribulose-5-phosphate 87.3 0.96 3.3E-05 42.3 6.4 73 200-274 127-207 (227)
493 2ze3_A DFA0005; organic waste 87.2 11 0.00036 36.3 13.8 164 202-391 28-239 (275)
494 1ub3_A Aldolase protein; schif 86.9 6 0.0002 36.8 11.6 113 202-316 76-205 (220)
495 3inp_A D-ribulose-phosphate 3- 86.9 0.82 2.8E-05 43.4 5.7 114 198-316 97-223 (246)
496 1tqj_A Ribulose-phosphate 3-ep 86.9 0.12 4.1E-06 48.1 -0.1 73 210-284 134-217 (230)
497 2qxy_A Response regulator; reg 86.8 8.3 0.00028 30.7 11.1 86 278-383 18-103 (142)
498 2p10_A MLL9387 protein; putati 86.6 2.3 7.8E-05 41.5 8.7 90 198-290 172-284 (286)
499 3k30_A Histamine dehydrogenase 86.6 0.47 1.6E-05 50.5 4.3 165 198-385 245-422 (690)
500 3t6c_A RSPA, putative MAND fam 86.5 1.1 3.8E-05 45.6 6.8 119 164-296 230-350 (440)
No 1
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=100.00 E-value=5.8e-72 Score=543.89 Aligned_cols=267 Identities=41% Similarity=0.652 Sum_probs=250.9
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHhcCChHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCH
Q 015424 120 GNTPRNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP 199 (407)
Q Consensus 120 ~~~p~~iLe~Iv~~K~~ev~~~k~~~pl~~l~~~~~~~~~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp 199 (407)
++.+.+||++|+++|++||+++|+.+|+.+|+..+...+++++|.++|++.. ..++++|||||||+|||||+|++++||
T Consensus 3 ~~m~~~iL~~I~~~k~~ev~~~~~~~~~~~l~~~~~~~~~~~~f~~al~~~~-~~~~~~vIaE~KraSPSkG~i~~~~dp 81 (272)
T 3tsm_A 3 GSMSTDILRKIEAYKREEIAAAKARLALDELKARTRDQSAPRGFLKALEAKR-AAGQFALIAEIKKASPSKGLIRPDFDP 81 (272)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCCHHHHHHHHH-HTTCCEEEEEECSEETTTEESCSSCCH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCCCHHHHHhhcc-ccCCceEEEEeccCCCCCCccCCCCCH
Confidence 3445689999999999999999999999999999988899999999998752 136789999999999999999999999
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHH
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRY 279 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~ 279 (407)
.++|+.|+++||+||||+||+.||+|+++||..||+. +++||||||||+|+|||++|+.+|||+||||+++|+++++.+
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~-v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~ 160 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQA-CSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAKE 160 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHT-SSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHh-cCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHHHHHH
Confidence 9999999999999999999999999999999999997 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEE
Q 015424 280 MTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVV 359 (407)
Q Consensus 280 Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vV 359 (407)
|++.++++||++||||||.+|+++|+++ |+++|||||||| +||++|++++.+|++.+ |.++++|
T Consensus 161 l~~~a~~lGl~~lvevh~~eEl~~A~~~-ga~iIGinnr~l---------~t~~~dl~~~~~L~~~i------p~~~~vI 224 (272)
T 3tsm_A 161 LEDTAFALGMDALIEVHDEAEMERALKL-SSRLLGVNNRNL---------RSFEVNLAVSERLAKMA------PSDRLLV 224 (272)
T ss_dssp HHHHHHHTTCEEEEEECSHHHHHHHTTS-CCSEEEEECBCT---------TTCCBCTHHHHHHHHHS------CTTSEEE
T ss_pred HHHHHHHcCCeEEEEeCCHHHHHHHHhc-CCCEEEECCCCC---------ccCCCChHHHHHHHHhC------CCCCcEE
Confidence 9999999999999999999999999998 999999999999 99999999999999863 4578999
Q ss_pred EeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhcCc
Q 015424 360 GESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFGKD 404 (407)
Q Consensus 360 AESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~~~ 404 (407)
+||||+|++|+.++.++|+||||||++||+++||.+++++|+.++
T Consensus 225 aesGI~t~edv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~~g~ 269 (272)
T 3tsm_A 225 GESGIFTHEDCLRLEKSGIGTFLIGESLMRQHDVAAATRALLTGA 269 (272)
T ss_dssp EESSCCSHHHHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHHHC-
T ss_pred EECCCCCHHHHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999754
No 2
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=100.00 E-value=2.5e-69 Score=519.72 Aligned_cols=243 Identities=30% Similarity=0.472 Sum_probs=217.0
Q ss_pred ccHHHHHHHHHHHHHHHHHhcCChHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHH
Q 015424 124 RNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIA 203 (407)
Q Consensus 124 ~~iLe~Iv~~K~~ev~~~k~~~pl~~l~~~~~~~~~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA 203 (407)
+.+|++|++.+.++.. .. .....|.++|.++|..... .++++|||||||+|||+|.|+ +||.++|
T Consensus 6 ~g~L~div~~~~~~~~-------~~-----~~~~~p~~~~~~~l~~~~~-~~~~~iIAEiKraSPSkg~i~--~dp~~iA 70 (258)
T 4a29_A 6 KGWLEDVVQLSLRRPS-------VR-----ASRQRPIISLNERILEFNK-RNITAIIAVYERKSPSGLDVE--RDPIEYA 70 (258)
T ss_dssp CHHHHHHHHHHHTCCC-------CC-----CCCSSCCCCHHHHHHHHHH-TTCCCEEEEECSBCTTSCBCC--CCHHHHH
T ss_pred HHHHHHHHHHHHhChH-------HH-----HhhcCCccCHHHHHHHHhh-CCCcEEEEEEecCCCCCCCcc--CCHHHHH
Confidence 4678888876543211 10 1123467899999977543 477899999999999999984 6899999
Q ss_pred HHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHH
Q 015424 204 RSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKI 283 (407)
Q Consensus 204 ~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~ 283 (407)
+.| ++||+|||||||++||+||++||..||++ +++||||||||+|||||+||+.+|||+||||+++|++.+|.+|+++
T Consensus 71 ~~~-~~GA~aiSVLTd~~~F~Gs~~~L~~vr~~-v~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~L~~~~l~~l~~~ 148 (258)
T 4a29_A 71 KFM-ERYAVGLSITTEEKYFNGSYETLRKIASS-VSIPILMSDFIVKESQIDDAYNLGADTVLLIVKILTERELESLLEY 148 (258)
T ss_dssp HHH-TTTCSEEEEECCSTTTCCCHHHHHHHHTT-CSSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHHH
T ss_pred HHH-hCCCeEEEEeCCCCCCCCCHHHHHHHHHh-cCCCEeeccccccHHHHHHHHHcCCCeeehHHhhcCHHHHHHHHHH
Confidence 866 57999999999999999999999999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeC
Q 015424 284 CKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESG 363 (407)
Q Consensus 284 a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESG 363 (407)
|+++||++||||||++|+++|+++ |+++|||||||| +||++|++++.+|++.+ |.++++|+|||
T Consensus 149 A~~lGl~~LvEVh~~~El~rAl~~-~a~iIGINNRnL---------~tf~vdl~~t~~L~~~i------p~~~~~VsESG 212 (258)
T 4a29_A 149 ARSYGMEPLILINDENDLDIALRI-GARFIGIMSRDF---------ETGEINKENQRKLISMI------PSNVVKVAKLG 212 (258)
T ss_dssp HHHTTCCCEEEESSHHHHHHHHHT-TCSEEEECSBCT---------TTCCBCHHHHHHHHTTS------CTTSEEEEEES
T ss_pred HHHHhHHHHHhcchHHHHHHHhcC-CCcEEEEeCCCc---------cccccCHHHHHHHHhhC------CCCCEEEEcCC
Confidence 999999999999999999999998 999999999999 99999999999999873 56899999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 364 LFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 364 I~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
|+|++|+.++.++|+|||||||+||+++||. ++|+.
T Consensus 213 I~t~~dv~~l~~~G~~a~LVGealmr~~d~~---~~Li~ 248 (258)
T 4a29_A 213 ISERNEIEELRKLGVNAFLISSSLMRNPEKI---KELIE 248 (258)
T ss_dssp SCCHHHHHHHHHTTCCEEEECHHHHHCTTHH---HHHHC
T ss_pred CCCHHHHHHHHHCCCCEEEECHHHhCCCcHH---HHHHc
Confidence 9999999999999999999999999999975 45544
No 3
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=100.00 E-value=8.3e-68 Score=509.46 Aligned_cols=248 Identities=33% Similarity=0.507 Sum_probs=235.8
Q ss_pred cHHHHHHHHHHHHHHHHHhcCChHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHH
Q 015424 125 NILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIAR 204 (407)
Q Consensus 125 ~iLe~Iv~~K~~ev~~~k~~~pl~~l~~~~~~~~~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ 204 (407)
|||++|+++|+.||+++|+..|+. + +++++|.++|++. ++++|||||||+|||+|.|+++++|.++|+
T Consensus 1 ~iL~~I~~~k~~ev~~~~~~~~~~---~-----~~~~~f~~al~~~----~~~~vIaE~K~aSPSkG~i~~~~~~~~iA~ 68 (251)
T 1i4n_A 1 RRLWEIVEAKKKDILEIDGENLIV---Q-----RRNHRFLEVLSGK----ERVKIIAEFKKASPSAGDINADASLEDFIR 68 (251)
T ss_dssp CCHHHHHHHHHHHGGGCCGGGCCC---C-----CCCCHHHHHHCCS----SSCEEEEEECSBCSSSCBSCTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhhCCCc---C-----CCCcCHHHHHhhC----CCceEEEeecCCCCCCCccCCCCCHHHHHH
Confidence 689999999999999999999987 1 5689999999753 558999999999999999999999999999
Q ss_pred HHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHH
Q 015424 205 SYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKIC 284 (407)
Q Consensus 205 ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a 284 (407)
+|+++ |+|||||||++||+||++||..||++ +++||||||||+|+|||++|+.+|||+||||++.|++.+|.+|+++|
T Consensus 69 ~y~~~-A~~IsVlTd~~~F~gs~~dL~~ir~~-v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a 146 (251)
T 1i4n_A 69 MYDEL-ADAISILTEKHYFKGDPAFVRAARNL-TCRPILAKDFYIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAA 146 (251)
T ss_dssp HHHHH-CSEEEEECCCSSSCCCTHHHHHHHTT-CCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHH
T ss_pred HHHHh-CCceEEEecccccCCCHHHHHHHHHh-CCCCEEEeeCCCCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHH
Confidence 99999 99999999999999999999999997 99999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCC
Q 015424 285 KLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGL 364 (407)
Q Consensus 285 ~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI 364 (407)
+++||++||||||.+|+++|+++.|+++|||||||| +||++|++++.+|++.+ |.++++|+||||
T Consensus 147 ~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l---------~t~~~d~~~~~~l~~~i------p~~~~vIaEsGI 211 (251)
T 1i4n_A 147 EELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDL---------DTFEIKKNVLWELLPLV------PDDTVVVAESGI 211 (251)
T ss_dssp HTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBCT---------TTCCBCTTHHHHHGGGS------CTTSEEEEESCC
T ss_pred HHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCccc---------ccCCCCHHHHHHHHHhC------CCCCEEEEeCCC
Confidence 999999999999999999999954899999999999 99999999999999863 457899999999
Q ss_pred CCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 365 FTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 365 ~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
+|++|+.++.++ +||||||++||+++||.+++++|+.
T Consensus 212 ~t~edv~~~~~~-a~avLVG~aimr~~d~~~~~~~l~~ 248 (251)
T 1i4n_A 212 KDPRELKDLRGK-VNAVLVGTSIMKAENPRRFLEEMRA 248 (251)
T ss_dssp CCGGGHHHHTTT-CSEEEECHHHHHCSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHHh
Confidence 999999999999 9999999999999999999999975
No 4
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=100.00 E-value=1.5e-67 Score=543.73 Aligned_cols=254 Identities=37% Similarity=0.623 Sum_probs=242.5
Q ss_pred ccHHHHHHHHHHHHHHHHHhcCChHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHH
Q 015424 124 RNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIA 203 (407)
Q Consensus 124 ~~iLe~Iv~~K~~ev~~~k~~~pl~~l~~~~~~~~~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA 203 (407)
.+||++|+++|++||+++|+.+|+.+|+..+. +++|+|.++|++ ++++|||||||+|||||.|+++++|.++|
T Consensus 2 ~~iL~~I~~~k~~ev~~~~~~~~~~~l~~~~~--~~~r~f~~al~~-----~~~~vIaEvKraSPSkG~i~~~~~~~~iA 74 (452)
T 1pii_A 2 QTVLAKIVADKAIWVEARKQQQPLASFQNEVQ--PSTRHFYDALQG-----ARTAFILECKKASPSKGVIRDDFDPARIA 74 (452)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSCGGGTGGGCC--CCCSCHHHHHCS-----SSCEEEEEECSEETTTEESCSSCCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhcCCHHHHHhhcc--cCCCCHHHHHhc-----CCCceEEEecCCCCCCCccCCCCCHHHHH
Confidence 37999999999999999999999999987653 678999999974 24899999999999999999999999999
Q ss_pred HHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHH
Q 015424 204 RSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKI 283 (407)
Q Consensus 204 ~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~ 283 (407)
++|+++ |+|||||||++||+||++||..||++ +++||||||||+|+|||++|+.+|||+||||+++|++++|.+|+++
T Consensus 75 ~~y~~~-A~~IsvLTd~~~F~gs~~dL~~vr~~-v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~ 152 (452)
T 1pii_A 75 AIYKHY-ASAISVLTDEKYFQGSFNFLPIVSQI-APQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAV 152 (452)
T ss_dssp HHHTTT-CSEEEEECCSTTTCCCTTHHHHHHHH-CCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTTCCHHHHHHHHHH
T ss_pred HHHHhh-CcEEEEEecccccCCCHHHHHHHHHh-cCCCeEEEeccCCHHHHHHHHHcCCCEEEEEcccCCHHHHHHHHHH
Confidence 999999 99999999999999999999999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeC
Q 015424 284 CKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESG 363 (407)
Q Consensus 284 a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESG 363 (407)
|+++||++||||||.+|+++|+++ |+++|||||||| +||++|++++.+|++.+ |.++++|+|||
T Consensus 153 a~~lgm~~LvEvh~~eE~~~A~~l-ga~iIGinnr~L---------~t~~~dl~~~~~L~~~i------p~~~~vIaEsG 216 (452)
T 1pii_A 153 AHSLEMGVLTEVSNEEEQERAIAL-GAKVVGINNRDL---------RDLSIDLNRTRELAPKL------GHNVTVISESG 216 (452)
T ss_dssp HHHTTCEEEEEECSHHHHHHHHHT-TCSEEEEESEET---------TTTEECTHHHHHHHHHH------CTTSEEEEESC
T ss_pred HHHcCCeEEEEeCCHHHHHHHHHC-CCCEEEEeCCCC---------CCCCCCHHHHHHHHHhC------CCCCeEEEECC
Confidence 999999999999999999999998 999999999999 99999999999999873 45789999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhcC
Q 015424 364 LFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFGK 403 (407)
Q Consensus 364 I~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~~ 403 (407)
|+|++|++++.++ +|||||||+||+++||.+++++|+..
T Consensus 217 I~t~edv~~~~~~-a~avLVGealmr~~d~~~~~~~l~~~ 255 (452)
T 1pii_A 217 INTYAQVRELSHF-ANGFLIGSALMAHDDLHAAVRRVLLG 255 (452)
T ss_dssp CCCHHHHHHHTTT-CSEEEECHHHHTCSCHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999854
No 5
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=100.00 E-value=1.4e-66 Score=505.43 Aligned_cols=259 Identities=39% Similarity=0.593 Sum_probs=235.0
Q ss_pred cccHHHHHHHHHHHHHHHHHhcCChHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHH
Q 015424 123 PRNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEI 202 (407)
Q Consensus 123 p~~iLe~Iv~~K~~ev~~~k~~~pl~~l~~~~~~~~~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~i 202 (407)
|||||++|+++|++||+++|+..|+++|++.+...+++++|.++|++ .+++|||||||+|||+|.|++++||.++
T Consensus 3 ~~~il~~i~~~k~~~v~~~~~~~~~~~l~~~~~~~~~~~~f~~al~~-----~~~~~IaE~K~asPs~g~i~~~~~p~~~ 77 (272)
T 3qja_A 3 PATVLDSILEGVRADVAAREASVSLSEIKAAAAAAPPPLDVMAALRE-----PGIGVIAEVKRASPSAGALATIADPAKL 77 (272)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHSCCCCCHHHHHTS-----SSCEEEEEEC-------------CHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHhhCCHHHHHHHHhhCCCCCCHHHHHhc-----CCCeEEEEEecCCCCCCccCCCCCHHHH
Confidence 68999999999999999999999999999999888999999999974 2389999999999999999999999999
Q ss_pred HHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHH
Q 015424 203 ARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTK 282 (407)
Q Consensus 203 A~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~ 282 (407)
|++|+++||+|||||||++||+|++++|..||+. +++||||||||+|+|||++|+++|||+|+||++.|+++++.+|++
T Consensus 78 A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~-v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~ 156 (272)
T 3qja_A 78 AQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRAS-VSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLD 156 (272)
T ss_dssp HHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHh-CCCCEEECccccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHH
Confidence 9999999999999999999999999999999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEee
Q 015424 283 ICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGES 362 (407)
Q Consensus 283 ~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAES 362 (407)
.++++||++|+||||.+|+++|+++ |+++|||||||+ +||.+|++.+.+|.+.+ +.++++|+||
T Consensus 157 ~a~~lGl~~lvev~t~ee~~~A~~~-Gad~IGv~~r~l---------~~~~~dl~~~~~l~~~v------~~~~pvVaeg 220 (272)
T 3qja_A 157 RTESLGMTALVEVHTEQEADRALKA-GAKVIGVNARDL---------MTLDVDRDCFARIAPGL------PSSVIRIAES 220 (272)
T ss_dssp HHHHTTCEEEEEESSHHHHHHHHHH-TCSEEEEESBCT---------TTCCBCTTHHHHHGGGS------CTTSEEEEES
T ss_pred HHHHCCCcEEEEcCCHHHHHHHHHC-CCCEEEECCCcc---------cccccCHHHHHHHHHhC------cccCEEEEEC
Confidence 9999999999999999999999998 999999999999 99999999999998752 3478999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhcC
Q 015424 363 GLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFGK 403 (407)
Q Consensus 363 GI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~~ 403 (407)
||+|++|+.++.++|++||+||++||+++||.+++++|++.
T Consensus 221 GI~t~edv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~~~ 261 (272)
T 3qja_A 221 GVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVTA 261 (272)
T ss_dssp CCCSHHHHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999863
No 6
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=100.00 E-value=8.5e-62 Score=467.18 Aligned_cols=247 Identities=38% Similarity=0.547 Sum_probs=230.7
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHhcCChHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCH
Q 015424 120 GNTPRNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP 199 (407)
Q Consensus 120 ~~~p~~iLe~Iv~~K~~ev~~~k~~~pl~~l~~~~~~~~~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp 199 (407)
.+.+.+||++|+++|++||+++++ . ..|++++|.++|+.. +++|||||||+|||||+|++ +||
T Consensus 5 ~~~~~~~l~~i~~~k~~~v~~~~~----------~-~~~~~~~~~~al~~~-----~~~~IaE~k~aSPskg~i~~-~~p 67 (254)
T 1vc4_A 5 LSRVPGVLGEIARKRASEVAPYPL----------P-EPPSVPSFKEALLRP-----GLSVIAEVKRQSPSEGLIRE-VDP 67 (254)
T ss_dssp CTTCCHHHHHHHHHHHHTCCCCCC----------C-CCCCCCCHHHHHTSS-----SCEEEEEECSCCTTTCCCCS-CCH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHh----------c-cCCCccCHHHHHhhc-----CCcEEeeecCCCcCCCcCCC-CCH
Confidence 344568999999999999987665 1 457789999999742 37999999999999999999 999
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHH
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRY 279 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~ 279 (407)
.++|+.|+++||+||||+||+.||+|+++||..||+. +++|||+||||+|+|||++|+++|||+|+|+++.|+ +++++
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~-v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~-~~l~~ 145 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREA-VDLPLLRKDFVVDPFMLEEARAFGASAALLIVALLG-ELTGA 145 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHH-CCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHG-GGHHH
T ss_pred HHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHh-cCCCEEECCcCCCHHHHHHHHHcCCCEEEECccchH-HHHHH
Confidence 9999999999999999999999999999999999997 999999999999999999999999999999999999 89999
Q ss_pred HHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccC---Cc
Q 015424 280 MTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQK---NI 356 (407)
Q Consensus 280 Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~---~v 356 (407)
+++.++++||+++|||||.+|+++++++ |+++||+||||| +||.+|++++.+|.+.+ +. ++
T Consensus 146 l~~~a~~lGl~~lvev~~~~E~~~a~~~-gad~IGvn~~~l---------~~~~~dl~~~~~L~~~i------~~~~~~~ 209 (254)
T 1vc4_A 146 YLEEARRLGLEALVEVHTERELEIALEA-GAEVLGINNRDL---------ATLHINLETAPRLGRLA------RKRGFGG 209 (254)
T ss_dssp HHHHHHHHTCEEEEEECSHHHHHHHHHH-TCSEEEEESBCT---------TTCCBCTTHHHHHHHHH------HHTTCCS
T ss_pred HHHHHHHCCCeEEEEECCHHHHHHHHHc-CCCEEEEccccC---------cCCCCCHHHHHHHHHhC------ccccCCC
Confidence 9999999999999999999999999998 999999999999 99999999999998763 23 68
Q ss_pred eEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 357 IVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 357 ~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
++|+||||+|++|+.++.+ |++||+||++||+++||.+++++|++
T Consensus 210 ~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l~~ 254 (254)
T 1vc4_A 210 VLVAESGYSRKEELKALEG-LFDAVLIGTSLMRAPDLEAALRELVG 254 (254)
T ss_dssp EEEEESCCCSHHHHHTTTT-TCSEEEECHHHHTSSCHHHHHHHHHC
T ss_pred eEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHHhC
Confidence 9999999999999999999 99999999999999999999999974
No 7
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.98 E-value=7e-32 Score=255.67 Aligned_cols=198 Identities=22% Similarity=0.243 Sum_probs=169.3
Q ss_pred eEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE---ecc-----ccC
Q 015424 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL---CKE-----FIV 249 (407)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL---~KD-----FIi 249 (407)
.+|+.| ..+..+.|+..+++.++|++|+++||.+||+ |++++|+.||+. +++||+ +|| |++
T Consensus 19 ~livsc--q~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~--------~~~~~i~~ir~~-v~~Pvig~~k~~~~~~~~~I 87 (229)
T 3q58_A 19 GLIVSC--QPVPGSPMDKPEIVAAMAQAAASAGAVAVRI--------EGIENLRTVRPH-LSVPIIGIIKRDLTGSPVRI 87 (229)
T ss_dssp CEEEEC--CCCTTSTTCSHHHHHHHHHHHHHTTCSEEEE--------ESHHHHHHHGGG-CCSCEEEECBCCCSSCCCCB
T ss_pred CEEEEE--eCCCCCCCCCcchHHHHHHHHHHCCCcEEEE--------CCHHHHHHHHHh-cCCCEEEEEeecCCCCceEe
Confidence 366666 3355566788899999999999999999998 689999999997 999998 566 677
Q ss_pred CHH--HHHHHHHcCCCEEEEeccCC-CHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeecccccccccc
Q 015424 250 DAW--QIYYARTKGADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFS 326 (407)
Q Consensus 250 d~~--QI~eAr~~GADaVLLiaaiL-~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~ 326 (407)
+++ |+++++++|||.|+|+++.+ +++.+.++++.++++|+.++++|||.+|++++.++ |+++||+|++++ +.
T Consensus 88 ~~~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~-Gad~Ig~~~~g~----t~ 162 (229)
T 3q58_A 88 TPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCSTVNEGISCHQK-GIEFIGTTLSGY----TG 162 (229)
T ss_dssp SCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT-TCSEEECTTTTS----SS
T ss_pred CccHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecCCHHHHHHHHhC-CCCEEEecCccC----CC
Confidence 765 89999999999999999975 56789999999999999999999999999999997 999999999887 11
Q ss_pred ccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015424 327 YRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 401 (407)
Q Consensus 327 ~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 401 (407)
.+ +++.+|++...++.+ . ++++|++|||+|++|+.++.++||+||+||++||++.++.+.+.+.+
T Consensus 163 ~~-~~~~~~~~li~~l~~--------~-~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~p~~~~~~f~~~~ 227 (229)
T 3q58_A 163 PI-TPVEPDLAMVTQLSH--------A-GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRIEHICQWFSHAV 227 (229)
T ss_dssp SC-CCSSCCHHHHHHHHT--------T-TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHCHHHHHHHHHHHH
T ss_pred CC-cCCCCCHHHHHHHHH--------c-CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcChHHHHHHHHHHH
Confidence 11 245678777666643 2 68999999999999999999999999999999999888877777654
No 8
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.97 E-value=2.2e-31 Score=252.53 Aligned_cols=199 Identities=17% Similarity=0.174 Sum_probs=169.0
Q ss_pred eEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE---ecc-----ccC
Q 015424 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL---CKE-----FIV 249 (407)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL---~KD-----FIi 249 (407)
.+|+.| ..+..+.|+..+++.++|++|+++||.+|++ |++++|+.||+. +++||+ +|| |++
T Consensus 19 ~livsc--q~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~--------~~~~~i~~ir~~-v~~Pvig~~k~d~~~~~~~I 87 (232)
T 3igs_A 19 GLIVSC--QPVPGSPLDKPEIVAAMALAAEQAGAVAVRI--------EGIDNLRMTRSL-VSVPIIGIIKRDLDESPVRI 87 (232)
T ss_dssp CEEEEC--CCCTTCTTCSHHHHHHHHHHHHHTTCSEEEE--------ESHHHHHHHHTT-CCSCEEEECBCCCSSCCCCB
T ss_pred CEEEEE--eCCCCCCCCCcchHHHHHHHHHHCCCeEEEE--------CCHHHHHHHHHh-cCCCEEEEEeecCCCcceEe
Confidence 366666 3455566788899999999999999999998 689999999997 999998 666 667
Q ss_pred CHH--HHHHHHHcCCCEEEEeccCC-CHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeecccccccccc
Q 015424 250 DAW--QIYYARTKGADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFS 326 (407)
Q Consensus 250 d~~--QI~eAr~~GADaVLLiaaiL-~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~ 326 (407)
+++ |+++++++|||.|+|+++.+ +++.+.++++.++++|+.++++|||.+|++++.++ |+++||+|++++ +.
T Consensus 88 ~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~-Gad~Ig~~~~g~----t~ 162 (232)
T 3igs_A 88 TPFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCSSVDDGLACQRL-GADIIGTTMSGY----TT 162 (232)
T ss_dssp SCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECCSHHHHHHHHHT-TCSEEECTTTTS----SS
T ss_pred CccHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHhC-CCCEEEEcCccC----CC
Confidence 765 89999999999999999975 56789999999999999999999999999999997 999999999887 11
Q ss_pred ccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 327 YRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 327 ~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
.+ +++.+|++...++.+ . ++++|++|||+|++|+.++.++||+||+||++||++.++.+.+.+.+.
T Consensus 163 ~~-~~~~~~~~~i~~l~~--------~-~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~p~~~~~~~~~~i~ 228 (232)
T 3igs_A 163 PD-TPEEPDLPLVKALHD--------A-GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITRLEHICGWYNDALK 228 (232)
T ss_dssp SS-CCSSCCHHHHHHHHH--------T-TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHCHHHHHHHHHHHHH
T ss_pred CC-CCCCCCHHHHHHHHh--------c-CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcCHHHHHHHHHHHHH
Confidence 11 245678777777654 2 679999999999999999999999999999999997777777766554
No 9
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=4.8e-32 Score=268.63 Aligned_cols=191 Identities=23% Similarity=0.259 Sum_probs=155.1
Q ss_pred CCCHHHHHHHHHHcCCcEEEEE----ecCCcCCC-----CHHHHHHHHhcCCCCcEEecccc--CCHHHHHHHHHcCCCE
Q 015424 196 DFDPVEIARSYEKGGAACLSIL----TDEKYFKG-----SFENLEAVRSAGVKCPLLCKEFI--VDAWQIYYARTKGADA 264 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVL----Td~~~F~G-----s~edL~~Vr~a~v~lPVL~KDFI--id~~QI~eAr~~GADa 264 (407)
++++.++|+.|+++||.|||+| ||.+||+| +++++..|+++ |++||++|+|| +++||++++ +|||+
T Consensus 23 d~~~~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~arm~~p~~i~~I~~a-v~iPV~~K~rig~~~e~qilea--~GaD~ 99 (330)
T 2yzr_A 23 DVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDA-VSIPVMAKCRIGHTTEALVLEA--IGVDM 99 (330)
T ss_dssp EESSHHHHHHHHHHTCSEEEECSSCHHHHC--CCCCCCCCHHHHHHHHHH-CSSCEEEEEETTCHHHHHHHHH--TTCSE
T ss_pred eCCHHHHHHHHHHcCCCEEEecCCccccccCCcchhhcCCHHHHHHHHHh-cCCCeEEEEeecchHHHHHHHH--cCCCE
Confidence 4577899999999999999999 89999999 99999999997 99999999999 999999999 99999
Q ss_pred EEEeccCCCHHH--------------------HHHHHHHHHH----------cCCcEEEEe--C--------------CH
Q 015424 265 VLLIAAVLPDLD--------------------IRYMTKICKL----------LGLTALVEV--H--------------DE 298 (407)
Q Consensus 265 VLLiaaiL~~~~--------------------L~~Li~~a~~----------LGL~aLVEV--h--------------t~ 298 (407)
|+ ++.+|++.+ |.+.+.++.+ .|+..|||+ | |.
T Consensus 100 Id-~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~s~~~~ 178 (330)
T 2yzr_A 100 ID-ESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMTD 178 (330)
T ss_dssp EE-EETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHTTSCH
T ss_pred Ee-hhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHHhcCcceeeccCCCCcccchhHHHHHHHHHHHHHHhccCCH
Confidence 97 888887544 3344443321 259999999 7 89
Q ss_pred HHHHH-HhcccCCcE----------EEeeccccccccccccccccccCc--------hhHHHHhhcccccccccCCceEE
Q 015424 299 REMDR-VLGIEGIEL----------IGINNRNLAISIFSYRTETFEVDN--------SNTKKLLEGERGEIIRQKNIIVV 359 (407)
Q Consensus 299 eEler-Al~l~Ga~i----------IGINnRdL~~~~~~~t~~Tf~vDl--------~~t~~L~~~~~~~~i~~~~v~vV 359 (407)
+|+.+ |.++ |+++ +|+||||| .+|.++. ..+.++++.++... .-.+++|
T Consensus 179 ~El~~~A~~~-gadyv~~~~~vt~~~G~~~r~L---------g~G~Vf~T~TK~~~~~~~lell~~i~~~~--~IPVV~V 246 (330)
T 2yzr_A 179 EEVYGVAKFY-ANRYAELAKTVREGMGLPATVL---------ENEPIYEGFTLAEIIDGLYEVLLEVKKLG--RLPVVNF 246 (330)
T ss_dssp HHHHHHHHHH-HGGGGHHHHHHHHHTTSCSCCC---------TTSEEETTEEHHHHHHHHHHHHHHHHHHT--SCSSEEE
T ss_pred HHHHHHHHHc-CCCEeecccchhhhcccccccc---------ccccccCCCcccCCCcchHHHHHHHHHhC--CCCeEEE
Confidence 99966 7886 9999 99999999 6666655 22335555433210 0123448
Q ss_pred EeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 360 GESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 360 AESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
++|||+|++|+..++++|||||+||++||+++||.+.+++|..
T Consensus 247 AeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ 289 (330)
T 2yzr_A 247 AAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVE 289 (330)
T ss_dssp ECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988864
No 10
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=99.97 E-value=5.7e-31 Score=258.75 Aligned_cols=197 Identities=21% Similarity=0.204 Sum_probs=150.7
Q ss_pred cCCCCCCCCHHHHHHHHHHcCCcEEEEE----ecCCcCCC-----CHHHHHHHHhcCCCCcEEecccc--CCHHHHHHHH
Q 015424 190 RGILREDFDPVEIARSYEKGGAACLSIL----TDEKYFKG-----SFENLEAVRSAGVKCPLLCKEFI--VDAWQIYYAR 258 (407)
Q Consensus 190 kG~i~~~~dp~~iA~ay~~~GA~aISVL----Td~~~F~G-----s~edL~~Vr~a~v~lPVL~KDFI--id~~QI~eAr 258 (407)
||-+..++++.++|+.|+++||+||||| ||..||+| ++++|+.||++ +++||++|..+ +++||+++
T Consensus 21 kggv~~d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~-v~iPvl~k~~i~~ide~qil~-- 97 (297)
T 4adt_A 21 KGGVIMDVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKC-ISINVLAKVRIGHFVEAQILE-- 97 (297)
T ss_dssp TTCEEEEESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTT-CCSEEEEEEETTCHHHHHHHH--
T ss_pred cCCcccCCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHh-cCCCEEEeccCCcHHHHHHHH--
Confidence 3434446688899999999999999999 79999999 99999999997 99999987333 78899987
Q ss_pred HcCCCEEEEeccCCCHHHHHHHHHHHHH--cCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccc-----------
Q 015424 259 TKGADAVLLIAAVLPDLDIRYMTKICKL--LGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIF----------- 325 (407)
Q Consensus 259 ~~GADaVLLiaaiL~~~~L~~Li~~a~~--LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~----------- 325 (407)
++|||+| ..+..++..+ +++.+++ +|+.+++||||.+|+.+++++ |+++||+|+| ++|+.
T Consensus 98 aaGAD~I-d~s~~~~~~~---li~~i~~~~~g~~vvv~v~~~~Ea~~a~~~-Gad~I~v~g~--~gTG~~~~~v~h~~~~ 170 (297)
T 4adt_A 98 ELKVDML-DESEVLTMAD---EYNHINKHKFKTPFVCGCTNLGEALRRISE-GASMIRTKGE--AGTGNIIEAIKHIRTV 170 (297)
T ss_dssp HTTCSEE-EEETTSCCSC---SSCCCCGGGCSSCEEEEESSHHHHHHHHHH-TCSEEEECCC--TTSCCCHHHHHHHHHH
T ss_pred HcCCCEE-EcCCCCCHHH---HHHHHHhcCCCCeEEEEeCCHHHHHHHHhC-CCCEEEECCC--cCCCchHHHHHHHHHh
Confidence 5999999 4444445433 4555555 799999999999999999997 9999999987 12221
Q ss_pred --------cc---ccccc----ccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 326 --------SY---RTETF----EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 326 --------~~---t~~Tf----~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
.. .=.|| .++++...++.+.. +-.+++|++|||+|++|+..+.++|||+|+||++||++
T Consensus 171 ~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~------~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a 244 (297)
T 4adt_A 171 NNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLK------RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFES 244 (297)
T ss_dssp HHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHT------SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTS
T ss_pred hhhhhhhccccccccccccccCCCCHHHHHHHHHhc------CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcC
Confidence 00 00233 45565555555431 22456679999999999999999999999999999999
Q ss_pred CChHHHHHhhhc
Q 015424 391 DDPGKGITGLFG 402 (407)
Q Consensus 391 ~dp~~~i~~L~~ 402 (407)
+||.+.+++|..
T Consensus 245 ~dp~~~~~~l~~ 256 (297)
T 4adt_A 245 ENPQKMASSIVM 256 (297)
T ss_dssp SCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999998864
No 11
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=99.95 E-value=3.3e-28 Score=230.74 Aligned_cols=206 Identities=18% Similarity=0.222 Sum_probs=171.9
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHH--
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQ-- 253 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~Q-- 253 (407)
++-|++..|=. .+. ...+..++++.+.+.... -.-+.||.|++.+|..+++. +++||++|| +|++|
T Consensus 6 ~~~i~~NwKmn-~~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~L~~v~~~-~~i~v~aQd--v~~~~~G 73 (225)
T 1hg3_A 6 EPIIAINFKTY-IEA----TGKRALEIAKAAEKVYKE----TGVTIVVAPQLVDLRMIAES-VEIPVFAQH--IDPIKPG 73 (225)
T ss_dssp SSEEEEECTBC-GGG----SHHHHHHHHHHHHHHHHT----TCCEEEEECCHHHHHHHHHS-CSSCBEESC--CCSCCSB
T ss_pred CCEEEEECccc-CCC----CHHHHHHHHHHHHhhccc----cCCcEEEeCCHHHHHHHHHh-cCCceeeee--CCcccCC
Confidence 45677777654 110 001455666666442111 01245899999999999987 799999999 99999
Q ss_pred -------HHHHHHcCCCEEEEeccC--CCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeecccccccc
Q 015424 254 -------IYYARTKGADAVLLIAAV--LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISI 324 (407)
Q Consensus 254 -------I~eAr~~GADaVLLiaai--L~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~ 324 (407)
+++++.+|||+|||+++. +...++.++++.|+++||+++||||+.+|.+++..+ ++++||+|||+++|||
T Consensus 74 a~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge~~e~~~~~~~-~~~iIayep~waiGtG 152 (225)
T 1hg3_A 74 SHTGHVLPEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSNNPAVSAAVAAL-NPDYVAVEPPELIGTG 152 (225)
T ss_dssp SCTTCCCHHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT-CCSEEEECCTTTTTTS
T ss_pred CccCcccHHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcC-CCCEEEEeChhhhccC
Confidence 999999999999999998 787889999999999999999999999999999987 8899999999997766
Q ss_pred ccccccccccC-chhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 325 FSYRTETFEVD-NSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 325 ~~~t~~Tf~vD-l~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
.+. +|+++| .+.+.++++.+ ++++.++++|||++.+|+..+...|+||+|||+++|+++|+.+.+++|+.
T Consensus 153 ~~v--~t~~~d~~~~~~~~ir~~------~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~~~~~~i~~l~~ 223 (225)
T 1hg3_A 153 IPV--SKAKPEVITNTVELVKKV------NPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKAKDPEKAIWDLVS 223 (225)
T ss_dssp CCT--TTSCTHHHHHHHHHHHHH------CTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTCSSHHHHHHHHHH
T ss_pred CCC--CCCChhHHHHHHHHHHhc------cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCcCHHHHHHHHHh
Confidence 443 578888 88888888763 35789999999999999999999999999999999999999999999875
No 12
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=99.95 E-value=3.7e-28 Score=230.54 Aligned_cols=205 Identities=21% Similarity=0.252 Sum_probs=170.8
Q ss_pred ceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHH---
Q 015424 177 PALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQ--- 253 (407)
Q Consensus 177 ~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~Q--- 253 (407)
+-|++..|=. .+. ......++++.+.+.... -.-+.||.|++.+|..+++. +++||++|| +|++|
T Consensus 4 ~~i~~NwKmn-~~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~L~~v~~~-~~i~v~aQd--v~~~~~Ga 71 (226)
T 1w0m_A 4 PILIINFKAY-GEA----AGKRAVELAKAAERAARE----LGVNIVVAPNHLELGLVSQS-VDIPVYAQG--ADVEAGGA 71 (226)
T ss_dssp SEEEEECTBC-GGG----STHHHHHHHHHHHHHHHH----HTCEEEEECCGGGHHHHHTT-CSSCBEESC--CSBSSCSS
T ss_pred CEEEEECccc-CCC----CHHHHHHHHHHHHhcccc----cCCcEEEeCCHHHHHHHHHh-cCCceEeeE--CChhhCCC
Confidence 4567777654 110 012455666666442111 01145899999999999986 799999999 99999
Q ss_pred ------HHHHHHcCCCEEEEeccC--CCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccc
Q 015424 254 ------IYYARTKGADAVLLIAAV--LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIF 325 (407)
Q Consensus 254 ------I~eAr~~GADaVLLiaai--L~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~ 325 (407)
+++++.+|||+|||+++. +...++.++++.|.++||+++||||+.+|.+.+..+ ++++||+|||+++|||.
T Consensus 72 ~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge~~e~~~~~~~-~~~iIayep~waiGtG~ 150 (226)
T 1w0m_A 72 HTAHVSLENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAPDPRTSLAAAAL-GPHAVAVEPPELIGTGR 150 (226)
T ss_dssp CTTCCBHHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-CCSEEEECCGGGTTTSC
T ss_pred ccCCCCHHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcC-CCCEEEEcChhhhccCC
Confidence 999999999999999998 777889999999999999999999999999999887 88999999999977654
Q ss_pred cccccccccC-chhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 326 SYRTETFEVD-NSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 326 ~~t~~Tf~vD-l~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
+. +|+++| .+.+.++++.+ +.++.++++|||++.+|+..+...|+||+|||+++|+++|+.+.+++|+.
T Consensus 151 ~v--~t~~~d~~~~~~~~ir~~------~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a~~~~~~i~~l~~ 220 (226)
T 1w0m_A 151 AV--SRYKPEAIVETVGLVSRH------FPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKDPYAKIVELAK 220 (226)
T ss_dssp CH--HHHCHHHHHHHHHHHHHH------CTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTCSSHHHHHHHHHH
T ss_pred CC--CCCChhHHHHHHHHHHhc------cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCCcCHHHHHHHHHH
Confidence 33 478888 88888888763 35789999999999999999999999999999999999999999999875
No 13
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=99.92 E-value=1.4e-25 Score=210.64 Aligned_cols=171 Identities=18% Similarity=0.253 Sum_probs=144.1
Q ss_pred CCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHH---------HHHHHHcCCCEEEEecc--CCCHHHHHHHHHHHHHcC
Q 015424 220 EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQ---------IYYARTKGADAVLLIAA--VLPDLDIRYMTKICKLLG 288 (407)
Q Consensus 220 ~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~Q---------I~eAr~~GADaVLLiaa--iL~~~~L~~Li~~a~~LG 288 (407)
+.||.|++.+|..+|+. +++||++|| ++++| +++++++|||+|+|+++ .++..++.++++.++++|
T Consensus 35 ~~~~~~~~~~l~~v~~~-~~~~v~aqd--~~~~~~ga~tGei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~G 111 (219)
T 2h6r_A 35 TIGVAPQFVDLRMIVEN-VNIPVYAQH--IDNINPGSHTGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLG 111 (219)
T ss_dssp CEEEECCTTTHHHHHHH-CCSCBEESC--CCSCCSBSCTTCCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHT
T ss_pred cEEEECCHHHHHHHHHH-cCCcEEEEE--CChhhcCCccCchHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCC
Confidence 46899999999999987 799999999 77888 99999999999999998 788888999999999999
Q ss_pred CcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccC-chhHHHHhhcccccccccCCceEEEeeCCCCH
Q 015424 289 LTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVD-NSNTKKLLEGERGEIIRQKNIIVVGESGLFTP 367 (407)
Q Consensus 289 L~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vD-l~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~ 367 (407)
|++++|||+.+|.+++..+ ++.+||+|+|++++||... +|+.+| ++.+.++++.+ +.+++++++|||+++
T Consensus 112 l~~iv~v~~~~e~~~~~~~-~~~~i~~~~~~~iGtG~~~--~t~~~~~~~~~~~~ir~~------~~~~~ii~ggGI~~~ 182 (219)
T 2h6r_A 112 LETIVCTNNINTSKAVAAL-SPDCIAVEPPELIGTGIPV--SKANPEVVEGTVRAVKEI------NKDVKVLCGAGISKG 182 (219)
T ss_dssp CEEEEEESSSHHHHHHTTT-CCSEEEECCCC----------------CSHHHHHHHHHH------CTTCEEEECSSCCSH
T ss_pred CeEEEEeCCchHHHHHHhC-CCCEEEEEeccccccCCCC--ccCCHHHHHHHHHHHHhc------cCCCeEEEEeCcCcH
Confidence 9999999999999999998 8999999999986533210 356666 67777776652 246899999999999
Q ss_pred HHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 368 DDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 368 eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
++++.+.+.|+||||||+++|+++||.+.+++|..
T Consensus 183 ~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l~~ 217 (219)
T 2h6r_A 183 EDVKAALDLGAEGVLLASGVVKAKNVEEAIRELIK 217 (219)
T ss_dssp HHHHHHHTTTCCCEEESHHHHTCSSHHHHHHHHCC
T ss_pred HHHHHHhhCCCCEEEEcHHHhCcccHHHHHHHHHH
Confidence 99999999999999999999999999999999864
No 14
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.91 E-value=7.8e-25 Score=212.58 Aligned_cols=189 Identities=22% Similarity=0.227 Sum_probs=154.0
Q ss_pred CHHHHHHHHHHcCCcEEEEE----ecCCcCCC-----CHHHHHHHHhcCCCCcEEeccccCC--HHHHHHHHHcCCCEEE
Q 015424 198 DPVEIARSYEKGGAACLSIL----TDEKYFKG-----SFENLEAVRSAGVKCPLLCKEFIVD--AWQIYYARTKGADAVL 266 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVL----Td~~~F~G-----s~edL~~Vr~a~v~lPVL~KDFIid--~~QI~eAr~~GADaVL 266 (407)
...++|+.|+++||.++++| +|..+|+| ++++++.|+++ |++||+.|++|-+ +.|+.++ +|||.|
T Consensus 19 ~~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~a-VsIPVm~k~righ~~EAqilea--~GaD~I- 94 (291)
T 3o07_A 19 VTPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNS-VSIPVMAKVRIGHFVEAQIIEA--LEVDYI- 94 (291)
T ss_dssp SSHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTT-CSSCEEEEEETTCHHHHHHHHH--TTCSEE-
T ss_pred CCHHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHh-CCCCeEEEEecCcHHHHHHHHH--cCCCEE-
Confidence 44589999999999999999 99999999 59999999997 9999999999999 7888877 999998
Q ss_pred EeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeecc---------------------ccccccc
Q 015424 267 LIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNR---------------------NLAISIF 325 (407)
Q Consensus 267 LiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnR---------------------dL~~~~~ 325 (407)
--+..|++.++.+.++. ++++...+++|+|++|+.++++. ||++|++..- .| .
T Consensus 95 Desevltpad~~~~I~k-~~f~vpfv~~~~~l~EAlrri~e-GA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l----~ 168 (291)
T 3o07_A 95 DESEVLTPADWTHHIEK-DKFKVPFVCGAKDLGEALRRINE-GAAMIRTKGEAGTGDVSEAVKHIRRITEEIKAC----Q 168 (291)
T ss_dssp EEETTSCCSCSSCCCCG-GGCSSCEEEEESSHHHHHHHHHH-TCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHH----H
T ss_pred ecccCCCHHHHHHHhhh-hcCCCcEEeeCCCHHHHHHHHHC-CCCEEEecCcCCCccHHHHHHHHHHHHHHHHHH----H
Confidence 44567888777555553 46899889999999999999996 9999998511 11 1
Q ss_pred cc-cc---cc----cccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHH
Q 015424 326 SY-RT---ET----FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGI 397 (407)
Q Consensus 326 ~~-t~---~T----f~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i 397 (407)
+| +. .| ...|++...++.+.. .-.++.|++|||.||+|+..++++|||||+||+++++++||.+..
T Consensus 169 g~~t~~el~~~a~~~~ad~elI~~Ike~~------~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~A 242 (291)
T 3o07_A 169 QLKSEDDIAKVAEEMRVPVSLLKDVLEKG------KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLA 242 (291)
T ss_dssp TCCCHHHHHHHHHHHTSCHHHHHHHHHHT------SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHH
T ss_pred cCCCHHHhhhcccccCCCHHHHHHHHHcc------CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHH
Confidence 22 21 23 357777776765531 113455789999999999999999999999999999999999888
Q ss_pred Hhhhc
Q 015424 398 TGLFG 402 (407)
Q Consensus 398 ~~L~~ 402 (407)
+.|..
T Consensus 243 kafv~ 247 (291)
T 3o07_A 243 TAVVE 247 (291)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 15
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.87 E-value=7.4e-22 Score=186.98 Aligned_cols=194 Identities=15% Similarity=0.067 Sum_probs=140.1
Q ss_pred cCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCC---HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEE
Q 015424 190 RGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGS---FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVL 266 (407)
Q Consensus 190 kG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs---~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVL 266 (407)
.|....+.++.++|+.|+++||++|++.+-...+.|. ++.++.+++. +++||+.+++|.++.|+.+++.+|||+|+
T Consensus 23 ~g~~~~~~~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~-~~iPvi~~ggi~~~~~i~~~~~~Gad~v~ 101 (266)
T 2w6r_A 23 SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADKAL 101 (266)
T ss_dssp TTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGG-CCSCEEEESCCCSTHHHHHHHHHTCSEEE
T ss_pred CCeeccCCCHHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCCcHhh
Confidence 3444455689999999999999999995433334444 8889999886 89999999999999999999999999999
Q ss_pred EeccCC----CHHHHHHHHHHHH--H----cCCcE-------EEEeCC--------HHH-HHHHhcccCCcEEEeecc--
Q 015424 267 LIAAVL----PDLDIRYMTKICK--L----LGLTA-------LVEVHD--------ERE-MDRVLGIEGIELIGINNR-- 318 (407)
Q Consensus 267 LiaaiL----~~~~L~~Li~~a~--~----LGL~a-------LVEVht--------~eE-lerAl~l~Ga~iIGINnR-- 318 (407)
++...+ +.+.+.++.+... . +++++ .|++|+ ..| ++++.++ |+..|.++++
T Consensus 102 lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~-G~~~i~~t~~~~ 180 (266)
T 2w6r_A 102 AASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKR-GAGEILLTSIDR 180 (266)
T ss_dssp CCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHT-TCSEEEEEETTT
T ss_pred hhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHc-CCCEEEEEeecC
Confidence 999999 3444555444333 1 45665 567665 344 4778887 9999999874
Q ss_pred ccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHH
Q 015424 319 NLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGIT 398 (407)
Q Consensus 319 dL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~ 398 (407)
+. ....+|++...++.+. .++++|++|||++++|+.+++++||+||+||++||+.+++.+.++
T Consensus 181 ~g---------~~~g~~~~~i~~l~~~--------~~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~~~~~~~~~ 243 (266)
T 2w6r_A 181 DG---------TKSGYDTEMIRFVRPL--------TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDMRELK 243 (266)
T ss_dssp TT---------TCSCCCHHHHHHHGGG--------CCSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC----------
T ss_pred CC---------CcCCCCHHHHHHHHHH--------cCCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcCCCCHHHHH
Confidence 44 4566788888887664 367999999999999999999999999999999999997766666
Q ss_pred hhhc
Q 015424 399 GLFG 402 (407)
Q Consensus 399 ~L~~ 402 (407)
+++.
T Consensus 244 ~~l~ 247 (266)
T 2w6r_A 244 EYLK 247 (266)
T ss_dssp ----
T ss_pred HHHH
Confidence 6543
No 16
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.87 E-value=9.5e-23 Score=199.10 Aligned_cols=193 Identities=21% Similarity=0.254 Sum_probs=146.9
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEe----cCCcCCC-----CHHHHHHHHhcCCCCcEEecccc--CCHHHHHHHHHcCCCE
Q 015424 196 DFDPVEIARSYEKGGAACLSILT----DEKYFKG-----SFENLEAVRSAGVKCPLLCKEFI--VDAWQIYYARTKGADA 264 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLT----d~~~F~G-----s~edL~~Vr~a~v~lPVL~KDFI--id~~QI~eAr~~GADa 264 (407)
+.+|.++|+.|+++||++|++|+ +.++|+| +++.+..+++. +++||++|+++ .+.+|++ .++|||+
T Consensus 27 ~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~-~~iPv~~k~r~g~~~~~~~~--~a~GAd~ 103 (305)
T 2nv1_A 27 DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA-VSIPVMAKARIGHIVEARVL--EAMGVDY 103 (305)
T ss_dssp EESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH-CSSCEEEEECTTCHHHHHHH--HHHTCSE
T ss_pred cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh-CCCCEEecccccchHHHHHH--HHCCCCE
Confidence 44788999999999999999997 7889999 89999999987 89999999998 5566664 4599999
Q ss_pred EEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeecccccccc-------------------c
Q 015424 265 VLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISI-------------------F 325 (407)
Q Consensus 265 VLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~-------------------~ 325 (407)
|+ +...+++.++.++++ ++.+|+.+++++++.+|+.++++. |+++|++... ++++ .
T Consensus 104 V~-~~~~l~~~~~~~~i~-~~~~g~~v~~~~~~~~e~~~a~~~-Gad~V~~~G~--~g~g~~~~~~~h~rt~~~~i~~l~ 178 (305)
T 2nv1_A 104 ID-ESEVLTPADEEFHLN-KNEYTVPFVCGCRDLGEATRRIAE-GASMLRTKGE--PGTGNIVEAVRHMRKVNAQVRKVV 178 (305)
T ss_dssp EE-ECTTSCCSCSSCCCC-GGGCSSCEEEEESSHHHHHHHHHT-TCSEEEECCC--TTSCCTHHHHHHHHHHHHHHHHHH
T ss_pred EE-EeccCCHHHHHHHHH-HhccCCcEEEEeCCHHHHHHHHHC-CCCEEEeccc--cCccchHHHHhhhhhhhccchhhc
Confidence 97 777787777767776 778999999999999999999986 9999998421 0100 1
Q ss_pred cccc---cc----cccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHH
Q 015424 326 SYRT---ET----FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGIT 398 (407)
Q Consensus 326 ~~t~---~T----f~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~ 398 (407)
++++ .+ ...+++...++.+.. .-.+++++.|||.|++|+..+.++||++|+||++|++.+||...++
T Consensus 179 gi~~~~~~~~~~~~~~~~~~i~~i~~~~------~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~p~~~~~ 252 (305)
T 2nv1_A 179 AMSEDELMTEAKNLGAPYELLLQIKKDG------KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAK 252 (305)
T ss_dssp HSCGGGHHHHHHHHTCCHHHHHHHHHHT------SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHH
T ss_pred cccchhhhcccccccccHHHHHHHHHhc------CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCCHHHHHH
Confidence 1111 12 224444444444320 1123444999999999999999999999999999999999988887
Q ss_pred hhhc
Q 015424 399 GLFG 402 (407)
Q Consensus 399 ~L~~ 402 (407)
+|..
T Consensus 253 ~l~~ 256 (305)
T 2nv1_A 253 AIVE 256 (305)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7754
No 17
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.86 E-value=1.3e-20 Score=176.83 Aligned_cols=194 Identities=21% Similarity=0.126 Sum_probs=151.1
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHH---HHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccC
Q 015424 195 EDFDPVEIARSYEKGGAACLSILTDEKYFKGSFEN---LEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (407)
Q Consensus 195 ~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~ed---L~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (407)
...++.++|+.|+++||++|++..-...+.|...+ ++.+++. +++||+..++|.++.++.++..+|||+|+++...
T Consensus 29 ~~~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~ 107 (252)
T 1ka9_F 29 DAGDPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAER-VFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAA 107 (252)
T ss_dssp STTCHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHH
T ss_pred ecCCHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHh-CCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHH
Confidence 45699999999999999999998544455565444 6777775 8999999999999999999999999999999988
Q ss_pred CCH-HHHHHHHHHHH----HcCCcE-------EEEeCC---------HHHHHHHhcccCCcEEEeecccccccccccccc
Q 015424 272 LPD-LDIRYMTKICK----LLGLTA-------LVEVHD---------EREMDRVLGIEGIELIGINNRNLAISIFSYRTE 330 (407)
Q Consensus 272 L~~-~~L~~Li~~a~----~LGL~a-------LVEVht---------~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~ 330 (407)
+.+ +.+.++.+... .+++++ .|++|+ .+.++++.++ |++.|.++.++- +..
T Consensus 108 l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~-G~~~i~~~~~~~-------~g~ 179 (252)
T 1ka9_F 108 VRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVEL-GAGEILLTSMDR-------DGT 179 (252)
T ss_dssp HHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHH-TCCEEEEEETTT-------TTT
T ss_pred HhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHc-CCCEEEEecccC-------CCC
Confidence 854 33555555432 246665 566664 5677888887 999888875432 004
Q ss_pred ccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC-ChHHHHHhhhcCcc
Q 015424 331 TFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD-DPGKGITGLFGKDI 405 (407)
Q Consensus 331 Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~-dp~~~i~~L~~~~~ 405 (407)
...+|++...++.+. .++++|++|||++++|+.++.++|++||+||++|++++ ++.+..+.|-...|
T Consensus 180 ~~g~~~~~i~~l~~~--------~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~~~~~~~~~~~l~~~~~ 247 (252)
T 1ka9_F 180 KEGYDLRLTRMVAEA--------VGVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFGEIPIPKLKRYLAEKGV 247 (252)
T ss_dssp CSCCCHHHHHHHHHH--------CSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHHHHTTC
T ss_pred cCCCCHHHHHHHHHH--------cCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcCCCCHHHHHHHHHHCCC
Confidence 456788888888764 25799999999999999999999999999999999998 77776666654433
No 18
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.86 E-value=3.1e-21 Score=180.23 Aligned_cols=182 Identities=15% Similarity=0.145 Sum_probs=147.1
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCH--HHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSF--ENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~--edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~ 275 (407)
||.++|+.|+++||++|+|.+...+|.|.. +.++.+++. +++||+++++|.++.|+.++..+|||+|++++..+.+.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~-~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~~p 110 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGK-LDVQVELSGGIRDDESLAAALATGCARVNVGTAALENP 110 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCHHHHHHHHHH-CSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChHHHHHHHHHh-cCCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhhCh
Confidence 899999999999999999999888888776 778888886 89999999999999999999999999999999887543
Q ss_pred HHHHHHHHHHHc------CCcEE-------EEeCC--------HHHHHHHhcccCCcEEEeeccccccccccccccc--c
Q 015424 276 DIRYMTKICKLL------GLTAL-------VEVHD--------EREMDRVLGIEGIELIGINNRNLAISIFSYRTET--F 332 (407)
Q Consensus 276 ~L~~Li~~a~~L------GL~aL-------VEVht--------~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~T--f 332 (407)
++ +.+..+.+ ++++. |.+|. .+.++++.++ |++.|.+++|+. .. .
T Consensus 111 ~~--~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~-G~~~i~~~~~~~---------~~~~~ 178 (244)
T 2y88_A 111 QW--CARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSE-GCSRFVVTDITK---------DGTLG 178 (244)
T ss_dssp HH--HHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHT-TCCCEEEEETTT---------TTTTS
T ss_pred HH--HHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhC-CCCEEEEEecCC---------ccccC
Confidence 22 34444444 44444 22232 5667888887 999999999987 21 1
Q ss_pred ccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHc---CCCEEEEcccccCCCChHHHHHhh
Q 015424 333 EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA---GVKAVLVGESIVKQDDPGKGITGL 400 (407)
Q Consensus 333 ~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~---GadaVLVGeaLmk~~dp~~~i~~L 400 (407)
.+|++...++.+. .++++|++|||++++|+.++.++ |+++|+||++|+..++....+.+.
T Consensus 179 g~~~~~~~~l~~~--------~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~~~~~~~~~~~ 241 (244)
T 2y88_A 179 GPNLDLLAGVADR--------TDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALAA 241 (244)
T ss_dssp CCCHHHHHHHHTT--------CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHHH
T ss_pred CCCHHHHHHHHHh--------CCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHCCCcCHHHHHHH
Confidence 3588888887653 36799999999999999999999 999999999999998765555444
No 19
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.85 E-value=1.8e-20 Score=175.96 Aligned_cols=192 Identities=17% Similarity=0.101 Sum_probs=151.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHH---HHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccC
Q 015424 195 EDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENL---EAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (407)
Q Consensus 195 ~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL---~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (407)
...||.++|+.|+++||++|+|.+-..+|.|...++ +.+++. +++||+..++|.++.++.++..+|||+|+++...
T Consensus 28 ~~~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~ 106 (253)
T 1thf_D 28 DSGDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQ-IDIPFTVGGGIHDFETASELILRGADKVSINTAA 106 (253)
T ss_dssp CTTCHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred eccCHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHh-CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 456999999999999999999997777777765554 556665 7999999999999999999999999999999988
Q ss_pred CCHH-HHHHHHHHHH----HcCCcE-------EEEeCC---------HHHHHHHhcccCCcEEEeecc--cccccccccc
Q 015424 272 LPDL-DIRYMTKICK----LLGLTA-------LVEVHD---------EREMDRVLGIEGIELIGINNR--NLAISIFSYR 328 (407)
Q Consensus 272 L~~~-~L~~Li~~a~----~LGL~a-------LVEVht---------~eElerAl~l~Ga~iIGINnR--dL~~~~~~~t 328 (407)
+.+. .+.++.+... .+++++ .|++|. .+.++++.++ |++.|.++.+ +.
T Consensus 107 l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~-G~~~i~~~~~~~~g-------- 177 (253)
T 1thf_D 107 VENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKR-GAGEILLTSIDRDG-------- 177 (253)
T ss_dssp HHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHT-TCSEEEEEETTTTT--------
T ss_pred HhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHC-CCCEEEEEeccCCC--------
Confidence 7543 3444444331 135555 566664 3456888887 9998888744 44
Q ss_pred ccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC-ChHHHHHhhhcCcc
Q 015424 329 TETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD-DPGKGITGLFGKDI 405 (407)
Q Consensus 329 ~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~-dp~~~i~~L~~~~~ 405 (407)
....+|++...++.+. .++++|++|||++++|+.++.++|+++|+||++|++++ ++.+.++.|....+
T Consensus 178 -~~~g~~~~~~~~l~~~--------~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~~~~~~~~~~~~l~~~g~ 246 (253)
T 1thf_D 178 -TKSGYDTEMIRFVRPL--------TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEYLKKHGV 246 (253)
T ss_dssp -SCSCCCHHHHHHHGGG--------CCSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTCSCHHHHHHHHHHTTC
T ss_pred -CCCCCCHHHHHHHHHh--------cCCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHcCCCCHHHHHHHHHHcCC
Confidence 4455788888887653 26799999999999999999999999999999999998 88888877755433
No 20
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.84 E-value=1.4e-20 Score=176.36 Aligned_cols=184 Identities=19% Similarity=0.180 Sum_probs=143.6
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCH--HHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSF--ENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~--edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~ 275 (407)
||.++|+.|+++||++|+|.+...+|.|.. +.++.+++. +++|++.+++|.++.++.++..+|||+|+++...+.+.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~-~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~~p 111 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNRALIAEVAQA-MDIKVELSGGIRDDDTLAAALATGCTRVNLGTAALETP 111 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCHHHHHHHHHH-CSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChHHHHHHHHHh-cCCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhhCH
Confidence 999999999999999999999888887766 558888886 89999999999999999999999999999999887543
Q ss_pred HHHHHHHHHHHcC------CcEE---EEeC-------CHHH-HHHHhcccCCcEEEeeccccccccccccccccccCchh
Q 015424 276 DIRYMTKICKLLG------LTAL---VEVH-------DERE-MDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSN 338 (407)
Q Consensus 276 ~L~~Li~~a~~LG------L~aL---VEVh-------t~eE-lerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~ 338 (407)
+ .+.+..+.+| +++- |++| +..| ++.+.++ |++.|.+++++--+ ....+|++.
T Consensus 112 ~--~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~-G~~~i~~~~~~~~~-------~~~g~~~~~ 181 (244)
T 1vzw_A 112 E--WVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKE-GCARYVVTDIAKDG-------TLQGPNLEL 181 (244)
T ss_dssp H--HHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHT-TCCCEEEEEC--------------CCCHHH
T ss_pred H--HHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhC-CCCEEEEeccCccc-------ccCCCCHHH
Confidence 2 2444455544 3332 4444 5555 5888887 99999988754300 334568888
Q ss_pred HHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHc---CCCEEEEcccccCCCChHHHHHhh
Q 015424 339 TKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA---GVKAVLVGESIVKQDDPGKGITGL 400 (407)
Q Consensus 339 t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~---GadaVLVGeaLmk~~dp~~~i~~L 400 (407)
..++.+. .++++|++|||++++|+.++.++ ||++|+||++|+..+...+.+.+.
T Consensus 182 ~~~i~~~--------~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~~~~~~~~~~~ 238 (244)
T 1vzw_A 182 LKNVCAA--------TDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAKAFTLEEALEA 238 (244)
T ss_dssp HHHHHHT--------CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHHH
T ss_pred HHHHHHh--------cCCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHcCCCCHHHHHHH
Confidence 8888764 25799999999999999999999 999999999999998655444443
No 21
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.83 E-value=9.8e-20 Score=168.17 Aligned_cols=186 Identities=17% Similarity=0.284 Sum_probs=145.6
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE---eccc-----cC--CHHHHHHHHHcCC
Q 015424 193 LREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL---CKEF-----IV--DAWQIYYARTKGA 262 (407)
Q Consensus 193 i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL---~KDF-----Ii--d~~QI~eAr~~GA 262 (407)
+....++.++|++|+++|+.+|++. +++.++.+|+. +++|++ ++|+ .+ +..++.++..+||
T Consensus 19 ~~~~~~~~~~a~~~~~~Ga~~i~~~--------~~~~i~~i~~~-~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Ga 89 (223)
T 1y0e_A 19 LHSSFIMSKMALAAYEGGAVGIRAN--------TKEDILAIKET-VDLPVIGIVKRDYDHSDVFITATSKEVDELIESQC 89 (223)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEEE--------SHHHHHHHHHH-CCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTC
T ss_pred CCCCccHHHHHHHHHHCCCeeeccC--------CHHHHHHHHHh-cCCCEEeeeccCCCccccccCCcHHHHHHHHhCCC
Confidence 3445688999999999999999984 68999999997 899997 4542 32 3468999999999
Q ss_pred CEEEEeccCCCH--HHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchh
Q 015424 263 DAVLLIAAVLPD--LDIRYMTKICKLL--GLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSN 338 (407)
Q Consensus 263 DaVLLiaaiL~~--~~L~~Li~~a~~L--GL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~ 338 (407)
|.|++++..+.. ..+.++++.+++. |+.+++++||.+|+.++.++ |+++|++++..+ +.......+..++++.
T Consensus 90 d~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~~~-G~d~i~~~~~g~--t~~~~~~~~~~~~~~~ 166 (223)
T 1y0e_A 90 EVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKNAARL-GFDYIGTTLHGY--TSYTQGQLLYQNDFQF 166 (223)
T ss_dssp SEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT-TCSEEECTTTTS--STTSTTCCTTHHHHHH
T ss_pred CEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHHHHHHc-CCCEEEeCCCcC--cCCCCCCCCCcccHHH
Confidence 999999987643 3677889999998 99999999999999999997 999999987654 0000000113345555
Q ss_pred HHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015424 339 TKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 401 (407)
Q Consensus 339 t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 401 (407)
..++.+. -++++++.|||++++|+.++.++|+|+|+||++|++ |....++|.
T Consensus 167 ~~~~~~~--------~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~~---p~~~~~~~~ 218 (223)
T 1y0e_A 167 LKDVLQS--------VDAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITR---PKEITKRFV 218 (223)
T ss_dssp HHHHHHH--------CCSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC---HHHHHHHHH
T ss_pred HHHHHhh--------CCCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHcC---cHHHHHHHH
Confidence 5565543 258999999999999999999999999999999998 444444443
No 22
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.82 E-value=6.1e-19 Score=164.45 Aligned_cols=173 Identities=15% Similarity=0.242 Sum_probs=142.3
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE---eccc-----cC--CHHHHHHHHHcCCCEEEE
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL---CKEF-----IV--DAWQIYYARTKGADAVLL 267 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL---~KDF-----Ii--d~~QI~eAr~~GADaVLL 267 (407)
++.++|++|.++||.+|++. ++++++.+|+. +++|++ ++|| ++ +..|+.++..+|||.|++
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~--------~~~~i~~i~~~-~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l 107 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN--------SVRDIKEIQAI-TDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAM 107 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE--------SHHHHHHHHTT-CCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEE
T ss_pred hHHHHHHHHHHCCCcEeecC--------CHHHHHHHHHh-CCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEE
Confidence 78999999999999999984 58999999987 899997 5554 23 346899999999999999
Q ss_pred eccCCCH---HHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHhcccCCcEEE-----eeccccccccccccccccccCch
Q 015424 268 IAAVLPD---LDIRYMTKICKLL--GLTALVEVHDEREMDRVLGIEGIELIG-----INNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 268 iaaiL~~---~~L~~Li~~a~~L--GL~aLVEVht~eElerAl~l~Ga~iIG-----INnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
++..+.. ..+.++++.+++. ++.+++++|+.+|+..+.++ |+++|| +|+... .+..++++
T Consensus 108 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea~~a~~~-Gad~i~~~v~g~~~~~~---------~~~~~~~~ 177 (234)
T 1yxy_A 108 DCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGLVAHQA-GIDFVGTTLSGYTPYSR---------QEAGPDVA 177 (234)
T ss_dssp ECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHHHHHHHT-TCSEEECTTTTSSTTSC---------CSSSCCHH
T ss_pred cccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHHHHHHHc-CCCEEeeeccccCCCCc---------CCCCCCHH
Confidence 9987743 2567888888887 99999999999999999997 999993 333221 23456776
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 401 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 401 (407)
...++.+ . ++++++.|||+|++|+..+.++|||+|+||++|++ |...+++|.
T Consensus 178 ~i~~~~~--------~-~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~---p~~~~~~l~ 229 (234)
T 1yxy_A 178 LIEALCK--------A-GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR---PKEIAERFI 229 (234)
T ss_dssp HHHHHHH--------T-TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC---HHHHHHHHH
T ss_pred HHHHHHh--------C-CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC---hHHHHHHHH
Confidence 6666643 2 57899999999999999999999999999999998 777776664
No 23
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.80 E-value=8.6e-20 Score=171.18 Aligned_cols=183 Identities=19% Similarity=0.195 Sum_probs=141.8
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCCc-CCC---CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCC
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEKY-FKG---SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~~-F~G---s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (407)
.++.++|+.|+++||++|++ +|..+ +.+ .++.++.++ . +++||+..++|.++.++.++..+|||+|+++...+
T Consensus 30 ~~~~~~a~~~~~~Gad~i~v-~d~~~~~~~~~~~~~~i~~i~-~-~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l 106 (241)
T 1qo2_A 30 KDPVELVEKLIEEGFTLIHV-VDLSNAIENSGENLPVLEKLS-E-FAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVL 106 (241)
T ss_dssp SCHHHHHHHHHHTTCCCEEE-EEHHHHHHCCCTTHHHHHHGG-G-GGGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEE-ecccccccCCchhHHHHHHHH-h-cCCcEEEECCCCCHHHHHHHHHCCCCEEEECchHh
Confidence 58999999999999999998 56433 223 455555555 5 78999999999999999999999999999999888
Q ss_pred CHHHHHHHHHHHHHc------CCcE---EEEeC--------CHHHH-HHHhcccCCcEEEeecccccccccccccccccc
Q 015424 273 PDLDIRYMTKICKLL------GLTA---LVEVH--------DEREM-DRVLGIEGIELIGINNRNLAISIFSYRTETFEV 334 (407)
Q Consensus 273 ~~~~L~~Li~~a~~L------GL~a---LVEVh--------t~eEl-erAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~v 334 (407)
.+.++ +.+. +.+ |+++ .|++| +..|+ .++.++ |+..|.++++.--+ ....+
T Consensus 107 ~~p~~--~~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~-G~~~i~~t~~~~~g-------~~~g~ 175 (241)
T 1qo2_A 107 EDPSF--LKSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEY-GLEEIVHTEIEKDG-------TLQEH 175 (241)
T ss_dssp HCTTH--HHHH-HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTT-TCCEEEEEETTHHH-------HTCCC
T ss_pred hChHH--HHHH-HHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhC-CCCEEEEEeecccc-------cCCcC
Confidence 55442 3333 444 4444 45555 66675 677786 99999999853200 34557
Q ss_pred CchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHc-----C-CCEEEEcccccCCCChHHHHHhhh
Q 015424 335 DNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA-----G-VKAVLVGESIVKQDDPGKGITGLF 401 (407)
Q Consensus 335 Dl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~-----G-adaVLVGeaLmk~~dp~~~i~~L~ 401 (407)
|++...++.+. .++++|++|||++++|+.+++++ | +|||+||++|++.+.+.+.+.+.+
T Consensus 176 ~~~~i~~l~~~--------~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~~~~~~~~~~~ 240 (241)
T 1qo2_A 176 DFSLTKKIAIE--------AEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGILTVEVMKRYA 240 (241)
T ss_dssp CHHHHHHHHHH--------HTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTSSCHHHHHHHH
T ss_pred CHHHHHHHHHh--------cCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCCCCHHHHHHHh
Confidence 88888888764 25799999999999999999999 9 999999999999998877666543
No 24
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.77 E-value=2.3e-19 Score=169.07 Aligned_cols=189 Identities=16% Similarity=0.094 Sum_probs=72.7
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEEecCCcCCC---CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccC
Q 015424 195 EDFDPVEIARSYEKGGAACLSILTDEKYFKG---SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (407)
Q Consensus 195 ~~~dp~~iA~ay~~~GA~aISVLTd~~~F~G---s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (407)
...++.++|+.|++.||++|++.+-...+.+ .++.++.+++. +++||+..++|.++.++.++..+|||+|+++...
T Consensus 33 ~~~~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~ 111 (247)
T 3tdn_A 33 TGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLRGADKVSINTAA 111 (247)
T ss_dssp EEEEHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHH
T ss_pred CCCCHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHh-CCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHH
Confidence 3568999999999999999998765443333 56788888886 8999999999999999999999999999999988
Q ss_pred CCHHHHHHHHHHHHHcC-------CcEE-------EEeC---------CHHHHHHHhcccCCcEEEeecccccccccccc
Q 015424 272 LPDLDIRYMTKICKLLG-------LTAL-------VEVH---------DEREMDRVLGIEGIELIGINNRNLAISIFSYR 328 (407)
Q Consensus 272 L~~~~L~~Li~~a~~LG-------L~aL-------VEVh---------t~eElerAl~l~Ga~iIGINnRdL~~~~~~~t 328 (407)
+.+.++ +.+.++.+| +++- |.+| ..+.++++.++ |++.|.+++++.-+
T Consensus 112 l~dp~~--~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~-G~~~i~~t~~~~~g------ 182 (247)
T 3tdn_A 112 VENPSL--ITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKR-GAGEILLTSIDRDG------ 182 (247)
T ss_dssp HHCTHH--HHHHHHHHC---------------------------------------------------------------
T ss_pred hhChHH--HHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhc-CCCEEEEecccCCC------
Confidence 855443 334444444 3331 1111 12234455565 89999888865411
Q ss_pred ccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 329 TETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 329 ~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
....+|++...++.+. -++++|+.|||++++|+.++.++|+|+|+||++|++.+++...++++++
T Consensus 183 -~~~g~~~~~~~~i~~~--------~~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~~p~~~~~~~~~~~ 247 (247)
T 3tdn_A 183 -TKSGYDTEMIRFVRPL--------TTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPSLITQIAQTFG 247 (247)
T ss_dssp --------------------------------------------------------------------------
T ss_pred -CcCCCCHHHHHHHHHh--------CCCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHcCcHHHHHHHHhcC
Confidence 1233566666666543 2579999999999999999999999999999999999999999888764
No 25
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.75 E-value=1e-18 Score=169.27 Aligned_cols=191 Identities=19% Similarity=0.202 Sum_probs=141.6
Q ss_pred HHHHHHHHHcCCcEEEE----EecCCcCCC-----CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEecc
Q 015424 200 VEIARSYEKGGAACLSI----LTDEKYFKG-----SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISV----LTd~~~F~G-----s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa 270 (407)
.++|++|.++||.+|++ .+|..+|+| +++.++.+++. +++|++.++.+-+..++..+.++|||+|.. ..
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~-~~~Pvi~~~~~~~~~~~~~~~~aGad~v~~-~~ 108 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAA-VSIPVMAKVRIGHFVEAMILEAIGVDFIDE-SE 108 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTT-CSSCEEEEEETTCHHHHHHHHHTTCSEEEE-ET
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHh-cCCCeEEEeccCCHHHHHHHHHCCCCEEee-eC
Confidence 68999999999999975 566678888 89999999986 899999876666678888899999999943 22
Q ss_pred CCCHHHHHHHHHHHHH--cCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccc-----------------cccccccc
Q 015424 271 VLPDLDIRYMTKICKL--LGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAIS-----------------IFSYRTET 331 (407)
Q Consensus 271 iL~~~~L~~Li~~a~~--LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~-----------------~~~~t~~T 331 (407)
..+. .++++.+++ +++..+++|||.+++.++.++ |+++|+++...-.++ ..+++..+
T Consensus 109 ~~~~---~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~-Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~ 184 (297)
T 2zbt_A 109 VLTP---ADEEHHIDKWKFKVPFVCGARNLGEALRRIAE-GAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDE 184 (297)
T ss_dssp TSCC---SCSSCCCCGGGCSSCEEEEESSHHHHHHHHHT-TCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGG
T ss_pred CCCh---HHHHHHHHHhCCCceEEeecCCHHHHHHHHHc-CCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCC
Confidence 2222 223333333 488889999999999999997 999999984211010 01233222
Q ss_pred -------cccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 332 -------FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 332 -------f~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
...+++...++.+.. +-.+++++.|||++++|+..+.++|||+|+||++|++++||.+.+++|..
T Consensus 185 ~~~~~~~~~~~~~~i~~l~~~~------~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~~dp~~~~~~l~~ 256 (297)
T 2zbt_A 185 LMAYAKEIGAPFELVKWVHDHG------RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVR 256 (297)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHS------SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGSSCHHHHHHHHHH
T ss_pred chhhhhcchhhHHHHHHHHHhc------CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCCCCHHHHHHHHHH
Confidence 345666666665531 11233349999999999999999999999999999999999988887753
No 26
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.74 E-value=3.5e-17 Score=151.32 Aligned_cols=189 Identities=21% Similarity=0.182 Sum_probs=142.0
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEEecCCcCCC---CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEecc
Q 015424 194 REDFDPVEIARSYEKGGAACLSILTDEKYFKG---SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (407)
Q Consensus 194 ~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~G---s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa 270 (407)
....++.++++.++++||++|+|..-...+.+ .++.++.+++. +++||+..++|.++.++.++..+|||+|.+...
T Consensus 30 ~~~~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~-~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~ 108 (253)
T 1h5y_A 30 REVGDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEA-VSIPVLVGGGVRSLEDATTLFRAGADKVSVNTA 108 (253)
T ss_dssp HEEECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHH-CSSCEEEESSCCSHHHHHHHHHHTCSEEEESHH
T ss_pred eecccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCCCEEEEChH
Confidence 33458999999999999999998743322222 45667777776 799999999999999999999999999999987
Q ss_pred CCCHHHHHHHHHHHHHcCCc---E-----------EEEeC---------CHHHHHHHhcccCCcEEEeeccccccccccc
Q 015424 271 VLPDLDIRYMTKICKLLGLT---A-----------LVEVH---------DEREMDRVLGIEGIELIGINNRNLAISIFSY 327 (407)
Q Consensus 271 iL~~~~L~~Li~~a~~LGL~---a-----------LVEVh---------t~eElerAl~l~Ga~iIGINnRdL~~~~~~~ 327 (407)
.+.+.+ .+.+.++.+|++ + +|.+| ..+.++.+.++ |++.|.+++++.-+
T Consensus 109 ~~~~~~--~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~-G~d~i~~~~~~~~g----- 180 (253)
T 1h5y_A 109 AVRNPQ--LVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEEL-GAGEILLTSIDRDG----- 180 (253)
T ss_dssp HHHCTH--HHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHH-TCSEEEEEETTTTT-----
T ss_pred HhhCcH--HHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhC-CCCEEEEecccCCC-----
Confidence 774433 255566667753 2 23322 24557778886 99999999887611
Q ss_pred cccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015424 328 RTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 401 (407)
Q Consensus 328 t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 401 (407)
....++++...++.+. .++++++.|||++++|+.++.++||++|+||++|++.+++.+.+.+.+
T Consensus 181 --~~~~~~~~~i~~l~~~--------~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~~~~~~~~l 244 (253)
T 1h5y_A 181 --TGLGYDVELIRRVADS--------VRIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFRVLSIAQVKRYL 244 (253)
T ss_dssp --TCSCCCHHHHHHHHHH--------CSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHH
T ss_pred --CcCcCCHHHHHHHHHh--------cCCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCCCHHHHHHHH
Confidence 1122467777777653 257899999999999999999999999999999999886555555444
No 27
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=99.74 E-value=3.3e-17 Score=150.61 Aligned_cols=174 Identities=13% Similarity=0.134 Sum_probs=137.7
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEe-ccccCCHHHHHHHHHcCCCEEEEeccCCCHHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC-KEFIVDAWQIYYARTKGADAVLLIAAVLPDLD 276 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~-KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~ 276 (407)
++.++++.+.++|+.+|++ ++.. ....+.++.+++. .++|++. .+++.++.+++.++.+|||+|++.. ..
T Consensus 20 ~~~~~~~~~~~~G~~~i~l-~~~~--~~~~~~i~~i~~~-~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~--~~--- 90 (212)
T 2v82_A 20 EALAHVGAVIDAGFDAVEI-PLNS--PQWEQSIPAIVDA-YGDKALIGAGTVLKPEQVDALARMGCQLIVTPN--IH--- 90 (212)
T ss_dssp HHHHHHHHHHHHTCCEEEE-ETTS--TTHHHHHHHHHHH-HTTTSEEEEECCCSHHHHHHHHHTTCCEEECSS--CC---
T ss_pred HHHHHHHHHHHCCCCEEEE-eCCC--hhHHHHHHHHHHh-CCCCeEEEeccccCHHHHHHHHHcCCCEEEeCC--CC---
Confidence 6888999999999999998 5443 2234566666654 5667654 4678899999999999999998543 21
Q ss_pred HHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCc
Q 015424 277 IRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNI 356 (407)
Q Consensus 277 L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v 356 (407)
.++++.++++|+..++++||.+|+.++..+ |+++|++++. ....++...++.+. + +.++
T Consensus 91 -~~~~~~~~~~g~~~~~g~~t~~e~~~a~~~-G~d~v~v~~t-------------~~~g~~~~~~l~~~-----~-~~~i 149 (212)
T 2v82_A 91 -SEVIRRAVGYGMTVCPGCATATEAFTALEA-GAQALKIFPS-------------SAFGPQYIKALKAV-----L-PSDI 149 (212)
T ss_dssp -HHHHHHHHHTTCEEECEECSHHHHHHHHHT-TCSEEEETTH-------------HHHCHHHHHHHHTT-----S-CTTC
T ss_pred -HHHHHHHHHcCCCEEeecCCHHHHHHHHHC-CCCEEEEecC-------------CCCCHHHHHHHHHh-----c-cCCC
Confidence 245678889999999999999999999997 9999998432 12345666666654 1 2258
Q ss_pred eEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC----CChHHHHHhhhc
Q 015424 357 IVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ----DDPGKGITGLFG 402 (407)
Q Consensus 357 ~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~----~dp~~~i~~L~~ 402 (407)
++++.|||+ ++++..+.++|+++|.||++|++. +||.+.+++|..
T Consensus 150 pvia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l~~ 198 (212)
T 2v82_A 150 AVFAVGGVT-PENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVK 198 (212)
T ss_dssp EEEEESSCC-TTTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHHHHH
T ss_pred eEEEeCCCC-HHHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHHHHH
Confidence 999999996 999999999999999999999998 789999888854
No 28
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.65 E-value=7.2e-16 Score=141.10 Aligned_cols=183 Identities=13% Similarity=0.170 Sum_probs=136.2
Q ss_pred HHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccC---CHHHHHHHHHcCCCEEEEeccCCCHH
Q 015424 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIV---DAWQIYYARTKGADAVLLIAAVLPDL 275 (407)
Q Consensus 199 p~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIi---d~~QI~eAr~~GADaVLLiaaiL~~~ 275 (407)
..++++... +|++.|-+-+ |.++.++++.++.+|+...++||.+ |+.+ ..+++.++..+|||+|++.... ..+
T Consensus 15 ~~~~~~~~~-~~~diie~G~-p~~~~~g~~~i~~ir~~~~~~~i~~-~~~~~~~~~~~~~~~~~~Gad~v~v~~~~-~~~ 90 (211)
T 3f4w_A 15 AMVFMDKVV-DDVDIIEVGT-PFLIREGVNAIKAIKEKYPHKEVLA-DAKIMDGGHFESQLLFDAGADYVTVLGVT-DVL 90 (211)
T ss_dssp HHHHHHHHG-GGCSEEEECH-HHHHHHTTHHHHHHHHHCTTSEEEE-EEEECSCHHHHHHHHHHTTCSEEEEETTS-CHH
T ss_pred HHHHHHHhh-cCccEEEeCc-HHHHhccHHHHHHHHHhCCCCEEEE-EEEeccchHHHHHHHHhcCCCEEEEeCCC-Chh
Confidence 345566664 5777777644 3335667899999997535889864 3332 2456899999999999997654 346
Q ss_pred HHHHHHHHHHHcCCcEEEEeC---CH-HHHHHHhcccCCcEEEeecccccccccccccccccc-CchhHHHHhhcccccc
Q 015424 276 DIRYMTKICKLLGLTALVEVH---DE-REMDRVLGIEGIELIGINNRNLAISIFSYRTETFEV-DNSNTKKLLEGERGEI 350 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVEVh---t~-eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~v-Dl~~t~~L~~~~~~~~ 350 (407)
++.++++.++++|+.+++++. +. ++++.+.++ |+++|++++ .+ +..++.. +++...++.+.
T Consensus 91 ~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~-g~d~i~v~~-g~-------~g~~~~~~~~~~i~~l~~~----- 156 (211)
T 3f4w_A 91 TIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEA-GADMLAVHT-GT-------DQQAAGRKPIDDLITMLKV----- 156 (211)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHH-TCCEEEEEC-CH-------HHHHTTCCSHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHc-CCCEEEEcC-CC-------cccccCCCCHHHHHHHHHH-----
Confidence 788999999999999999953 43 558888887 999999863 22 1123332 45555555543
Q ss_pred cccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 351 IRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 351 i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
+ .++++++.|||+ ++++..+.++|+|+|+||++|++++||.+++++|..
T Consensus 157 ~--~~~~i~~~gGI~-~~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~ 205 (211)
T 3f4w_A 157 R--RKARIAVAGGIS-SQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQ 205 (211)
T ss_dssp C--SSCEEEEESSCC-TTTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHH
T ss_pred c--CCCcEEEECCCC-HHHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHH
Confidence 1 257899999995 999999999999999999999999999999988854
No 29
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.64 E-value=2.9e-15 Score=136.74 Aligned_cols=183 Identities=17% Similarity=0.198 Sum_probs=143.0
Q ss_pred eEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCC--CCcEEeccccCCHHHHH
Q 015424 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEFIVDAWQIY 255 (407)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v--~lPVL~KDFIid~~QI~ 255 (407)
.+|+=++-.++. +..++++.+.++|+.+|++..... +..+.++.+|+. . +++ +.-+.+.++.|+.
T Consensus 11 ~~i~~~~~~~~~--------~~~~~~~~~~~~G~~~iev~~~~~---~~~~~i~~ir~~-~~~~~~-ig~~~v~~~~~~~ 77 (205)
T 1wa3_A 11 KIVAVLRANSVE--------EAKEKALAVFEGGVHLIEITFTVP---DADTVIKELSFL-KEKGAI-IGAGTVTSVEQCR 77 (205)
T ss_dssp CEEEEECCSSHH--------HHHHHHHHHHHTTCCEEEEETTST---THHHHHHHTHHH-HHTTCE-EEEESCCSHHHHH
T ss_pred CEEEEEecCCHH--------HHHHHHHHHHHCCCCEEEEeCCCh---hHHHHHHHHHHH-CCCCcE-EEecccCCHHHHH
Confidence 367666655543 578899999999999999976543 345668888875 3 333 3334567899999
Q ss_pred HHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccC
Q 015424 256 YARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVD 335 (407)
Q Consensus 256 eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vD 335 (407)
+|..+|||+| +...++ .++++.++++|+.++.+++|.+|+.+++++ |+++|.+++.+. . .
T Consensus 78 ~a~~~Gad~i--v~~~~~----~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~-Gad~vk~~~~~~---------~----g 137 (205)
T 1wa3_A 78 KAVESGAEFI--VSPHLD----EEISQFCKEKGVFYMPGVMTPTELVKAMKL-GHTILKLFPGEV---------V----G 137 (205)
T ss_dssp HHHHHTCSEE--ECSSCC----HHHHHHHHHHTCEEECEECSHHHHHHHHHT-TCCEEEETTHHH---------H----H
T ss_pred HHHHcCCCEE--EcCCCC----HHHHHHHHHcCCcEECCcCCHHHHHHHHHc-CCCEEEEcCccc---------c----C
Confidence 9999999999 344454 347788999999999999999999999998 999999876443 1 2
Q ss_pred chhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCC---hHHHHHhhhc
Q 015424 336 NSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD---PGKGITGLFG 402 (407)
Q Consensus 336 l~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d---p~~~i~~L~~ 402 (407)
++...++.+. + + ++++++.|||+ ++++..+.++|+++|.||++|++ +| |.+.+++|..
T Consensus 138 ~~~~~~l~~~-----~-~-~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~~ 198 (205)
T 1wa3_A 138 PQFVKAMKGP-----F-P-NVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFVE 198 (205)
T ss_dssp HHHHHHHHTT-----C-T-TCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-----C-C-CCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHHH
Confidence 3445555543 1 2 68999999995 89999999999999999999999 89 8888888764
No 30
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=99.62 E-value=8.3e-15 Score=139.98 Aligned_cols=180 Identities=18% Similarity=0.145 Sum_probs=128.7
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCCc-----CC-CCH-HHHHHHH------hcCCCCcEEeccccCCHHHHHHHHHcCCC
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEKY-----FK-GSF-ENLEAVR------SAGVKCPLLCKEFIVDAWQIYYARTKGAD 263 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~~-----F~-Gs~-edL~~Vr------~a~v~lPVL~KDFIid~~QI~eAr~~GAD 263 (407)
.+..+..+...++|+.+|..- ++.. |+ -+. +.+..++ +. -++|++..| .+++ |+++|||
T Consensus 43 ~~~~~~~~~al~~Gv~~vqlR-~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~-~~~~liInd----~~~l--A~~~gAd 114 (243)
T 3o63_A 43 GDLAQFAEAALAGGVDIIQLR-DKGSPGELRFGPLQARDELAACEILADAAHR-YGALFAVND----RADI--ARAAGAD 114 (243)
T ss_dssp CCHHHHHHHHHHTTCSEEEEC-CTTCHHHHHHCSCCHHHHHHHHHHHHHHHHH-TTCEEEEES----CHHH--HHHHTCS
T ss_pred chHHHHHHHHHHCCCCEEEEc-cCCCCccccccCCCHHHHHHHHHHHHHHHHh-hCCEEEEeC----HHHH--HHHhCCC
Confidence 367888888889999988763 2220 00 112 2222222 22 367777665 5666 8889999
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeecccccccccccccccc--ccCchhHHH
Q 015424 264 AVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETF--EVDNSNTKK 341 (407)
Q Consensus 264 aVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf--~vDl~~t~~ 341 (407)
+|+|+...++..+++.++ ..++..-+.|||.+|+.+|... |+++||+++. |++++++. .++++...+
T Consensus 115 GVHLg~~dl~~~~~r~~~----~~~~~iG~S~ht~~Ea~~A~~~-GaDyI~vgpv------f~T~tK~~~~~~gl~~l~~ 183 (243)
T 3o63_A 115 VLHLGQRDLPVNVARQIL----APDTLIGRSTHDPDQVAAAAAG-DADYFCVGPC------WPTPTKPGRAAPGLGLVRV 183 (243)
T ss_dssp EEEECTTSSCHHHHHHHS----CTTCEEEEEECSHHHHHHHHHS-SCSEEEECCS------SCCCC-----CCCHHHHHH
T ss_pred EEEecCCcCCHHHHHHhh----CCCCEEEEeCCCHHHHHHHhhC-CCCEEEEcCc------cCCCCCCCcchhhHHHHHH
Confidence 999999999876654432 2356666789999999999996 9999999753 33333332 356666666
Q ss_pred HhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 342 LLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 342 L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
+.+. . +.++++|++||| +++++..+.++|+++|.||++||+++||.+++++|..
T Consensus 184 ~~~~-----~-~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~~ 237 (243)
T 3o63_A 184 AAEL-----G-GDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRS 237 (243)
T ss_dssp HHTC---------CCCEEEESSC-CTTTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHHHH
T ss_pred HHHh-----c-cCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHH
Confidence 6542 1 136899999999 9999999999999999999999999999999998864
No 31
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.59 E-value=4.3e-15 Score=141.42 Aligned_cols=191 Identities=19% Similarity=0.247 Sum_probs=139.7
Q ss_pred ceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHh-cCCCCcEE---------ecc
Q 015424 177 PALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRS-AGVKCPLL---------CKE 246 (407)
Q Consensus 177 ~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~-a~v~lPVL---------~KD 246 (407)
..++.-++..- ..|.+....++..++++|.++|+.+|.+ ++ ..+..+++ ...++|++ +||
T Consensus 26 ~~~~~~id~~~-~l~p~~~~~~~~~~~~~~~~~g~~~i~~--~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~~d 95 (273)
T 2qjg_A 26 KTVIVPMDHGV-SNGPIKGLIDIRKTVNDVAEGGANAVLL--HK-------GIVRHGHRGYGKDVGLIIHLSGGTAISPN 95 (273)
T ss_dssp CEEEEECCHHH-HHCSCTTSSSHHHHHHHHHHHTCSEEEE--CH-------HHHHSCCCSSSCCCEEEEECEECCTTSSS
T ss_pred CEEEEEccccc-ccCCCcchhhHHHHHHHHHhcCCCEEEe--CH-------HHHHHHHHhhcCCCCEEEEEcCCCcCCCC
Confidence 46666666521 0223556679999999999999999975 22 12222221 11245664 334
Q ss_pred ccCC---HHHHHHHHHcCCCEE--EEeccCCCHH----HHHHHHHHHHHcCCcEEEEe----------CCH---HHH-HH
Q 015424 247 FIVD---AWQIYYARTKGADAV--LLIAAVLPDL----DIRYMTKICKLLGLTALVEV----------HDE---REM-DR 303 (407)
Q Consensus 247 FIid---~~QI~eAr~~GADaV--LLiaaiL~~~----~L~~Li~~a~~LGL~aLVEV----------ht~---eEl-er 303 (407)
+ ++ .+++.+|..+|||.| .+.....+.. ++.++.+.|+++|+.+++|+ ++. +++ +.
T Consensus 96 ~-~~~~~~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~ 174 (273)
T 2qjg_A 96 P-LKKVIVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARL 174 (273)
T ss_dssp T-TCCEECSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHH
T ss_pred c-ccchHHHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHH
Confidence 3 34 678999999999999 7766666653 46678888999999999999 454 555 77
Q ss_pred HhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCC--HHH----HHHHHHcC
Q 015424 304 VLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFT--PDD----IAYVQEAG 377 (407)
Q Consensus 304 Al~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t--~eD----~~~l~~~G 377 (407)
+.++ |+++|++++ ..|++...++.+. .++++|+.|||++ .+| +..+.++|
T Consensus 175 a~~~-Gad~i~~~~---------------~~~~~~l~~i~~~--------~~ipvva~GGi~~~~~~~~~~~~~~~~~~G 230 (273)
T 2qjg_A 175 GAEL-GADIVKTSY---------------TGDIDSFRDVVKG--------CPAPVVVAGGPKTNTDEEFLQMIKDAMEAG 230 (273)
T ss_dssp HHHT-TCSEEEECC---------------CSSHHHHHHHHHH--------CSSCEEEECCSCCSSHHHHHHHHHHHHHHT
T ss_pred HHHc-CCCEEEECC---------------CCCHHHHHHHHHh--------CCCCEEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 7886 999999962 1466777777654 2578999999995 778 77777899
Q ss_pred CCEEEEcccccCCCChHHHHHhhhc
Q 015424 378 VKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 378 adaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
+++|.||++|++.+||.+.+++|..
T Consensus 231 a~gv~vg~~i~~~~~~~~~~~~l~~ 255 (273)
T 2qjg_A 231 AAGVAVGRNIFQHDDVVGITRAVCK 255 (273)
T ss_dssp CSEEECCHHHHTSSSHHHHHHHHHH
T ss_pred CcEEEeeHHhhCCCCHHHHHHHHHH
Confidence 9999999999999999999888864
No 32
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=99.52 E-value=1.7e-13 Score=124.73 Aligned_cols=176 Identities=19% Similarity=0.162 Sum_probs=126.6
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCH----HHHHHHHhc--CCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccC
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~----edL~~Vr~a--~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (407)
++.+.++.+.++|+++|.+. ++. .+. +.++.+++. ..++||+..++ +..+..+|||.|.+....
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~-~~~---~~~~~~~~~~~~l~~~~~~~~v~v~v~~~------~~~a~~~gad~v~l~~~~ 96 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMR-IKN---APTREMYEIGKTLRQLTREYDALFFVDDR------VDVALAVDADGVQLGPED 96 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEEC-CCS---CCHHHHHHHHHHHHHHHHHTTCEEEEESC------HHHHHHHTCSEEEECTTS
T ss_pred hHHHHHHHHHHCCCCEEEEC-CCC---CCHHHHHHHHHHHHHHHHHcCCeEEEcCh------HHHHHHcCCCEEEECCcc
Confidence 89999999999999999764 432 233 333344421 13677877654 466888999999987766
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhccccccc
Q 015424 272 LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEII 351 (407)
Q Consensus 272 L~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i 351 (407)
++...++++ . .++...+++||.+|+.++... |+++|.+.+..- + .+-+ .....+++...++.+.
T Consensus 97 ~~~~~~~~~----~-~~~~~~v~~~t~~e~~~~~~~-g~d~i~~~~~~~--~-~~~~-~~~~~~~~~l~~l~~~------ 160 (215)
T 1xi3_A 97 MPIEVAKEI----A-PNLIIGASVYSLEEALEAEKK-GADYLGAGSVFP--T-KTKE-DARVIGLEGLRKIVES------ 160 (215)
T ss_dssp CCHHHHHHH----C-TTSEEEEEESSHHHHHHHHHH-TCSEEEEECSSC--C------CCCCCHHHHHHHHHHH------
T ss_pred CCHHHHHHh----C-CCCEEEEecCCHHHHHHHHhc-CCCEEEEcCCcc--C-CCCC-CCCCcCHHHHHHHHHh------
Confidence 654443332 2 588889999999999998886 999999865311 0 0000 1123455555555443
Q ss_pred ccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 352 RQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 352 ~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
.++++++.|||+ ++++..+.++|+++|.||++|++.+||.+.+++|..
T Consensus 161 --~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~ 208 (215)
T 1xi3_A 161 --VKIPVVAIGGIN-KDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRK 208 (215)
T ss_dssp --CSSCEEEESSCC-TTTHHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred --CCCCEEEECCcC-HHHHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHH
Confidence 256899999997 999999999999999999999999999988888764
No 33
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.47 E-value=4.2e-13 Score=129.01 Aligned_cols=184 Identities=15% Similarity=0.097 Sum_probs=130.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCH-
Q 015424 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD- 274 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~- 274 (407)
..||.++|+.|.+.||..|+++.... .+.+.++.+.+. +++||.....|.+. ++.+.. +|||.|.+.++++.+
T Consensus 37 ~~dp~~~A~~~~~~Ga~~l~vvDL~~---~n~~~i~~i~~~-~~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~~~ 110 (260)
T 2agk_A 37 QHPSSYYAKLYKDRDVQGCHVIKLGP---NNDDAAREALQE-SPQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLFTKE 110 (260)
T ss_dssp CCCHHHHHHHHHHTTCTTCEEEEESS---SCHHHHHHHHHH-STTTSEEESSCCTT-THHHHT-TTCSCEEECGGGBCTT
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeCCC---CCHHHHHHHHhc-CCceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHHhhc
Confidence 45999999999999999999987764 678888999886 89999988888776 888888 999999999998865
Q ss_pred ----HHHHHHHHHHHHcC---CcEEEEeC--------------------CHH-HHHHHhcccCCcEEEeecccccccccc
Q 015424 275 ----LDIRYMTKICKLLG---LTALVEVH--------------------DER-EMDRVLGIEGIELIGINNRNLAISIFS 326 (407)
Q Consensus 275 ----~~L~~Li~~a~~LG---L~aLVEVh--------------------t~e-ElerAl~l~Ga~iIGINnRdL~~~~~~ 326 (407)
.++ +.+.++.+| +-+.+++. +.. |+-+.++-. +.-|-++.++--+
T Consensus 111 g~~~p~~--~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~t~i~~dG---- 183 (260)
T 2agk_A 111 GHFQLKR--LERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLIHAADVEG---- 183 (260)
T ss_dssp CCBCHHH--HHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEEEC---------
T ss_pred CCCCHHH--HHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEEEeecccc----
Confidence 443 444444554 21223222 112 444444433 6777777765511
Q ss_pred ccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHc--CCCEEEEcccc--cCCC-ChHHHHHh
Q 015424 327 YRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA--GVKAVLVGESI--VKQD-DPGKGITG 399 (407)
Q Consensus 327 ~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~--GadaVLVGeaL--mk~~-dp~~~i~~ 399 (407)
.--.+|++...++.+..+. ..++++|++|||++++|+.++++. |+++|+||+++ +..+ -....+.+
T Consensus 184 ---~~~G~d~eli~~l~~~~~~----~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~~ 254 (260)
T 2agk_A 184 ---LCGGIDELLVSKLFEWTKD----YDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCCR 254 (260)
T ss_dssp -----CCCCHHHHHHHHHHHTT----CSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHHHHH
T ss_pred ---CcCCCCHHHHHHHHHhhcc----cCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHHH
Confidence 1123688888888765200 016799999999999999999998 99999999996 7777 54444433
No 34
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.46 E-value=3.8e-13 Score=141.70 Aligned_cols=188 Identities=18% Similarity=0.108 Sum_probs=138.7
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecCCcCCC------CHHHHHHHHhcCCCCcEEeccccCCH-----------HHHHHHH
Q 015424 196 DFDPVEIARSYEKGGAACLSILTDEKYFKG------SFENLEAVRSAGVKCPLLCKEFIVDA-----------WQIYYAR 258 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLTd~~~F~G------s~edL~~Vr~a~v~lPVL~KDFIid~-----------~QI~eAr 258 (407)
..||+++|+.|.+.||+.|+++.-..+..| +++.++.+++. +++||.....|.+. ..+.+..
T Consensus 279 ~~dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~-~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l 357 (555)
T 1jvn_A 279 LGKPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKT-VFVPLTVGGGIKDIVDVDGTKIPALEVASLYF 357 (555)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTT-CCSCEEEESSCSCEECTTCCEECHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhh-CCCcEEEeCccccchhcccccchHHHHHHHHH
Confidence 349999999999999999999988776654 24556666665 79999977777765 3477788
Q ss_pred HcCCCEEEEeccCCCH-------------HHHHHHHHHHHHcC---CcEEEEeC--------------------------
Q 015424 259 TKGADAVLLIAAVLPD-------------LDIRYMTKICKLLG---LTALVEVH-------------------------- 296 (407)
Q Consensus 259 ~~GADaVLLiaaiL~~-------------~~L~~Li~~a~~LG---L~aLVEVh-------------------------- 296 (407)
.+|||.|.+.+..+.+ .++ +-+.++.+| +-+-+++.
T Consensus 358 ~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (555)
T 1jvn_A 358 RSGADKVSIGTDAVYAAEKYYELGNRGDGTSP--IETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEK 435 (555)
T ss_dssp HHTCSEEEECHHHHHHHHHHHHTTSCCCSCSH--HHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCC
T ss_pred HcCCCEEEECCHHhhCchhhccccccccCHHH--HHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCc
Confidence 9999999999887642 122 344455566 22233331
Q ss_pred ------------------CHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceE
Q 015424 297 ------------------DEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIV 358 (407)
Q Consensus 297 ------------------t~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~v 358 (407)
..+.++++.++ |++.|-++.++--++ --.+|++...++.+. .++++
T Consensus 436 ~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~-Ga~~il~t~~~~dG~-------~~G~d~~li~~l~~~--------~~iPV 499 (555)
T 1jvn_A 436 YCWYQCTIKGGRESRDLGVWELTRACEAL-GAGEILLNCIDKDGS-------NSGYDLELIEHVKDA--------VKIPV 499 (555)
T ss_dssp EEEEEEEETTTTEEEEEEHHHHHHHHHHT-TCCEEEECCGGGTTT-------CSCCCHHHHHHHHHH--------CSSCE
T ss_pred ceeEEEEEecCccCCCCCHHHHHHHHHHc-CCCEEEEeCCCCCCC-------CCCCCHHHHHHHHHh--------CCccE
Confidence 24677777787 999888887765111 123588888887764 36799
Q ss_pred EEeeCCCCHHHHHHHHH-cCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 359 VGESGLFTPDDIAYVQE-AGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 359 VAESGI~t~eD~~~l~~-~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
|++|||.+++|+.++++ .|++||+||++|+..+...+.+++.+.
T Consensus 500 IasGGi~s~~d~~~~~~~~G~~gvivg~a~~~~~~~~~e~~~~l~ 544 (555)
T 1jvn_A 500 IASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLL 544 (555)
T ss_dssp EECSCCCSHHHHHHHHHHSCCSEEEESHHHHTTSCCHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHhcCChHHHHHHHHHcCCCCHHHHHHHHH
Confidence 99999999999999998 899999999999999988877777653
No 35
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=99.46 E-value=1.7e-12 Score=119.16 Aligned_cols=192 Identities=16% Similarity=0.113 Sum_probs=136.0
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCC----CHHHHHHHHhcCCCCcEEeccccCCHH-HHHHHHHcCCCEEEEeccCC
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKG----SFENLEAVRSAGVKCPLLCKEFIVDAW-QIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~G----s~edL~~Vr~a~v~lPVL~KDFIid~~-QI~eAr~~GADaVLLiaaiL 272 (407)
+..+.++.+.++|++.+++..-++.|.. +++.++.+|+. ++.|+...=++.|+. .+..+..+|||.|.+-....
T Consensus 17 ~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~-~~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~~ 95 (220)
T 2fli_A 17 NFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH-SKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTEST 95 (220)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTT-CCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGGC
T ss_pred HHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHh-CCCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCcc
Confidence 6778889999999999888743344333 38999999986 678888777777764 47778999999999976654
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEe--CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCc-hhHHHHhhccccc
Q 015424 273 PDLDIRYMTKICKLLGLTALVEV--HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDN-SNTKKLLEGERGE 349 (407)
Q Consensus 273 ~~~~L~~Li~~a~~LGL~aLVEV--ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl-~~t~~L~~~~~~~ 349 (407)
+....+++.+++.|+.+++-+ ++..|..+... .++++|-+-..+ .++++.+|..+. +...++.+....
T Consensus 96 --~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~-~~~d~vl~~~~~-----~g~~g~~~~~~~~~~i~~~~~~~~~- 166 (220)
T 2fli_A 96 --RHIHGALQKIKAAGMKAGVVINPGTPATALEPLL-DLVDQVLIMTVN-----PGFGGQAFIPECLEKVATVAKWRDE- 166 (220)
T ss_dssp --SCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGT-TTCSEEEEESSC-----TTCSSCCCCGGGHHHHHHHHHHHHH-
T ss_pred --ccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH-hhCCEEEEEEEC-----CCCcccccCHHHHHHHHHHHHHHHh-
Confidence 345667788888899999988 55555544444 367877331111 233344554331 222223222100
Q ss_pred ccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 350 IIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 350 ~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
...++++++.|||+ ++++..+.++|+|+|.||++|++++||.+++++|..
T Consensus 167 --~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~ 216 (220)
T 2fli_A 167 --KGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRT 216 (220)
T ss_dssp --TTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHH
T ss_pred --cCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHH
Confidence 01156899999997 899999999999999999999999999999988854
No 36
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=99.42 E-value=2.2e-12 Score=122.63 Aligned_cols=186 Identities=17% Similarity=0.151 Sum_probs=138.5
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHH---HHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCC
Q 015424 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLE---AVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~---~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (407)
..||.++|+.|.+.||+.++++.....+.|...++. .+.+. +.+|+-....|.+..++.....+|||.|.+.+.++
T Consensus 30 ~~dP~~~a~~~~~~gad~lhvvDld~a~~~~~~~~~~i~~i~~~-~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~ 108 (243)
T 4gj1_A 30 KYNPLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKE-VSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAI 108 (243)
T ss_dssp CCCHHHHHHHHHHHTCCEEEEEEHHHHHCGGGCCHHHHHHHHHH-CCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTT
T ss_pred CCCHHHHHHHHHHCCCCEEEEEecCcccccchhHHHHHHHHHHh-cCCCeEeccccccHHHHHHHHHcCCCEEEEccccc
Confidence 459999999999999999999998888887655544 44455 79999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCcEE---EE----------eCC---------HHHHHHHhcccCCcEEEeecccccccccccccc
Q 015424 273 PDLDIRYMTKICKLLGLTAL---VE----------VHD---------EREMDRVLGIEGIELIGINNRNLAISIFSYRTE 330 (407)
Q Consensus 273 ~~~~L~~Li~~a~~LGL~aL---VE----------Vht---------~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~ 330 (407)
.+.++ +.+.++.+|-+.+ ++ +|. .+-+++..+. |+.-|=+|.-|.-| +
T Consensus 109 ~~p~l--i~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~-g~~eil~t~Id~DG-------t 178 (243)
T 4gj1_A 109 KDATL--CLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNK-GLKHILCTDISKDG-------T 178 (243)
T ss_dssp TCHHH--HHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTT-TCCEEEEEETTC----------
T ss_pred cCCch--HHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhc-CCcEEEeeeecccc-------c
Confidence 87766 5566777763321 11 111 3345566665 88766666444422 2
Q ss_pred ccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhh
Q 015424 331 TFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGL 400 (407)
Q Consensus 331 Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L 400 (407)
--.+|++...++.+.. .++++|+.||+.+.+|+.+++ .+++||+||++|+.+.-.-+.+.+.
T Consensus 179 ~~G~d~~l~~~l~~~~-------~~ipviasGGv~~~~Dl~~l~-~~~~gvivg~Al~~g~i~l~ea~~~ 240 (243)
T 4gj1_A 179 MQGVNVRLYKLIHEIF-------PNICIQASGGVASLKDLENLK-GICSGVIVGKALLDGVFSVEEGIRC 240 (243)
T ss_dssp --CCCHHHHHHHHHHC-------TTSEEEEESCCCSHHHHHHTT-TTCSEEEECHHHHTTSSCHHHHHHH
T ss_pred ccCCCHHHHHHHHHhc-------CCCCEEEEcCCCCHHHHHHHH-ccCchhehHHHHHCCCCCHHHHHHH
Confidence 3347888888876641 368999999999999999985 5699999999999887654444443
No 37
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.41 E-value=7.7e-13 Score=123.96 Aligned_cols=201 Identities=14% Similarity=0.170 Sum_probs=135.5
Q ss_pred CCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEE---ecCC---cCCC-----------C----HHHHHHH
Q 015424 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSIL---TDEK---YFKG-----------S----FENLEAV 233 (407)
Q Consensus 175 ~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVL---Td~~---~F~G-----------s----~edL~~V 233 (407)
++..+|+=+=...|+. .+..+.|+.++++ |+.|++. +||. .|-+ + ++.++.+
T Consensus 3 ~~~~~~~~i~~~~~~~------~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i 75 (248)
T 1geq_A 3 KDGSLIPYLTAGDPDK------QSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEF 75 (248)
T ss_dssp CTTEEEEEEETTSSCH------HHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCccEEEEEeCCCCCH------HHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 3456766665555542 2567889999999 9999998 2332 1211 2 6778888
Q ss_pred HhcCCCCcEEeccccCC------HHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC--CHHHHHHHh
Q 015424 234 RSAGVKCPLLCKEFIVD------AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH--DEREMDRVL 305 (407)
Q Consensus 234 r~a~v~lPVL~KDFIid------~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh--t~eElerAl 305 (407)
|+. +++||....++.+ ...+..+.++|||.|++.. +...+..++++.++++|+..++-+. |..|..+++
T Consensus 76 ~~~-~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~--~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~ 152 (248)
T 1geq_A 76 RRH-SSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVD--LPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVI 152 (248)
T ss_dssp HTT-CCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETT--CCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHH
T ss_pred Hhh-CCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECC--CChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHH
Confidence 886 7899887654333 3577888999999999964 3445678899999999998876554 666665555
Q ss_pred cccCCc-EEEeecccccccccccccc--cccc-CchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEE
Q 015424 306 GIEGIE-LIGINNRNLAISIFSYRTE--TFEV-DNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAV 381 (407)
Q Consensus 306 ~l~Ga~-iIGINnRdL~~~~~~~t~~--Tf~v-Dl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaV 381 (407)
.. +++ +|.+-.+ .|++.. .+.. .++...++.+. .++++++.|||++++++..+.++|+|+|
T Consensus 153 ~~-~~d~~i~~~~~------~G~~g~~~~~~~~~~~~i~~l~~~--------~~~pi~~~GGI~~~e~i~~~~~~Gad~v 217 (248)
T 1geq_A 153 DD-MTTGFVYLVSL------YGTTGAREEIPKTAYDLLRRAKRI--------CRNKVAVGFGVSKREHVVSLLKEGANGV 217 (248)
T ss_dssp HH-HCSSEEEEECC------C-------CCCHHHHHHHHHHHHH--------CSSCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred Hh-cCCCeEEEEEC------CccCCCCCCCChhHHHHHHHHHhh--------cCCCEEEEeecCCHHHHHHHHHcCCCEE
Confidence 43 455 6665322 122212 1222 23344444432 2578999999999999999999999999
Q ss_pred EEcccccCCC--ChHHHHHhhh
Q 015424 382 LVGESIVKQD--DPGKGITGLF 401 (407)
Q Consensus 382 LVGeaLmk~~--dp~~~i~~L~ 401 (407)
+||++|++.. ++ +.+++|+
T Consensus 218 ivGsai~~~~~~~~-~~~~~~~ 238 (248)
T 1geq_A 218 VVGSALVKIIGEKG-REATEFL 238 (248)
T ss_dssp EECHHHHHHHHHHG-GGCHHHH
T ss_pred EEcHHHHhhHhhCh-HHHHHHH
Confidence 9999999873 44 4555544
No 38
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.41 E-value=2e-12 Score=124.32 Aligned_cols=206 Identities=17% Similarity=0.092 Sum_probs=128.9
Q ss_pred eEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcC--CCCHHHH-HHHHhcCCCCcEEecccc-CCHH-
Q 015424 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYF--KGSFENL-EAVRSAGVKCPLLCKEFI-VDAW- 252 (407)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F--~Gs~edL-~~Vr~a~v~lPVL~KDFI-id~~- 252 (407)
-.|+-++-.||---=--.+-++....+++.++||+.|-| +-+..- +.+.+++ ..+++ .+.|++-.... ....
T Consensus 4 ~~i~~~~~~~~~~~~t~g~p~~~~~~~~l~~~Gad~iel-g~pr~~~~g~~~~~~~~~l~~--~~~~~~pn~~~~~~~~~ 80 (264)
T 1xm3_A 4 LTIGGKSFQSRLLLGTGKYPSFDIQKEAVAVSESDILTF-AVRRMNIFEASQPNFLEQLDL--SKYTLLPNTAGASTAEE 80 (264)
T ss_dssp EEETTEEESCCEEEECSCSSCHHHHHHHHHHHTCSEEEE-ETTSSTTC-------CTTCCG--GGSEEEEECTTCSSHHH
T ss_pred eEECCEEecCCCEEEecCCCCHHHHHHHHHHcCCeEEEE-cccccccCCCCHHHHHHHHHh--cCCeEcCCccccCCHHH
Confidence 346666667773211112458888899999999999955 444321 1122222 22222 34565544422 1221
Q ss_pred ---HHHHHHHc-CCCEEEEec-cCCC--HHHHHHHHHHHHHc---CCcEE-EEeCCHHHHHHHhcccCCcEEEeeccccc
Q 015424 253 ---QIYYARTK-GADAVLLIA-AVLP--DLDIRYMTKICKLL---GLTAL-VEVHDEREMDRVLGIEGIELIGINNRNLA 321 (407)
Q Consensus 253 ---QI~eAr~~-GADaVLLia-aiL~--~~~L~~Li~~a~~L---GL~aL-VEVht~eElerAl~l~Ga~iIGINnRdL~ 321 (407)
-...++++ |++.|.|.. ..++ .+++.++++.++++ |+.++ ++++|.++++++.++ |+++|..-.- .
T Consensus 81 ~~~f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~-gad~v~~~~~-~- 157 (264)
T 1xm3_A 81 AVRIARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEEL-GVHAIMPGAS-P- 157 (264)
T ss_dssp HHHHHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHH-TCSCBEECSS-S-
T ss_pred HHHHHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHh-CCCEEEECCc-c-
Confidence 12234555 566655432 2221 24577899999998 99999 899999999999997 9998833111 1
Q ss_pred cccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015424 322 ISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 401 (407)
Q Consensus 322 ~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 401 (407)
++..+ .+ .+.+....+.+. .++++|++|||++++|+..+.++|||||+||++|++..||.+.+++|.
T Consensus 158 ---~Gt~~-~~-~~~~~l~~i~~~--------~~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~a~dp~~~~~~l~ 224 (264)
T 1xm3_A 158 ---IGSGQ-GI-LNPLNLSFIIEQ--------AKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAMK 224 (264)
T ss_dssp ---TTCCC-CC-SCHHHHHHHHHH--------CSSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHH
T ss_pred ---cCCCC-CC-CCHHHHHHHHhc--------CCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHH
Confidence 11111 11 123333333321 367999999999999999999999999999999999999998888876
Q ss_pred c
Q 015424 402 G 402 (407)
Q Consensus 402 ~ 402 (407)
.
T Consensus 225 ~ 225 (264)
T 1xm3_A 225 L 225 (264)
T ss_dssp H
T ss_pred H
Confidence 3
No 39
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=99.40 E-value=8.3e-12 Score=116.02 Aligned_cols=194 Identities=19% Similarity=0.193 Sum_probs=135.1
Q ss_pred CHHHHHHHHHHcCCcEEEEEe-cCCcCC---CCHHHHHHHHhcCCCCcEEeccccCCHH-HHHHHHHcCCCEEEEeccCC
Q 015424 198 DPVEIARSYEKGGAACLSILT-DEKYFK---GSFENLEAVRSAGVKCPLLCKEFIVDAW-QIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLT-d~~~F~---Gs~edL~~Vr~a~v~lPVL~KDFIid~~-QI~eAr~~GADaVLLiaaiL 272 (407)
+..+.++...++|+++|.+-- |..|++ ..++.++.+|+. ++.|+...=++.|+. .+..+..+|||.|.+-....
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~-~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~~ 102 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPI-TDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQS 102 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGG-CCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECSTT
T ss_pred HHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhc-cCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecCc
Confidence 567788889999999999853 444433 348888899876 567876655677765 68888999999998876511
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEe--CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCc-hhHHHHhhccccc
Q 015424 273 PDLDIRYMTKICKLLGLTALVEV--HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDN-SNTKKLLEGERGE 349 (407)
Q Consensus 273 ~~~~L~~Li~~a~~LGL~aLVEV--ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl-~~t~~L~~~~~~~ 349 (407)
+.+++.++++.+++.|+.+++-+ ++..|...+.. .++++|-+-... +++++.+|.... +...++.+..+.
T Consensus 103 ~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~-~~~d~vl~~~~~-----pg~~g~~~~~~~~~~i~~l~~~~~~- 175 (230)
T 1rpx_A 103 STIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVL-DAVDLVLIMSVN-----PGFGGQSFIESQVKKISDLRKICAE- 175 (230)
T ss_dssp TCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTT-TTCSEEEEESSC-----TTCSSCCCCTTHHHHHHHHHHHHHH-
T ss_pred cchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH-hhCCEEEEEEEc-----CCCCCccccHHHHHHHHHHHHHHHh-
Confidence 22356778888888999999998 45555444444 378888322111 233444553321 222233222100
Q ss_pred ccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 350 IIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 350 ~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
...++++++.|||+ ++++..+.++|+|+|.||++|++++||.+++++|..
T Consensus 176 --~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l~~ 225 (230)
T 1rpx_A 176 --RGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAPDYAEAIKGIKT 225 (230)
T ss_dssp --HTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred --cCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhCCCCHHHHHHHHHH
Confidence 00157899999996 899999999999999999999999999999998864
No 40
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.37 E-value=3.1e-13 Score=135.64 Aligned_cols=190 Identities=16% Similarity=0.193 Sum_probs=133.0
Q ss_pred EEEecccCCCcCCCC--CCCC---HHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEe--ccccCCHH
Q 015424 180 IAEVKKASPSRGILR--EDFD---PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC--KEFIVDAW 252 (407)
Q Consensus 180 IAEvKraSPSkG~i~--~~~d---p~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~--KDFIid~~ 252 (407)
|.|+++++|..+++. -.-| ..++++.++++|+.+|.|.+|..++++...++ |.. ..+|+.. ++|+.+++
T Consensus 114 ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~---r~~-~~~p~~~~~~~~~~~~~ 189 (370)
T 1gox_A 114 VEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADI---KNR-FVLPPFLTLKNFEGIDL 189 (370)
T ss_dssp HHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHH---HTT-CCCCTTCCCGGGSSSCC
T ss_pred HHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHH---Hhc-cCCCcccchhhhhhhhh
Confidence 356777767544443 1123 35678889999999999999999999998887 553 6778654 67766555
Q ss_pred HHHHHHHcCCCEEEEeccCCCHH-HHHHHHHHHHHcCCcEEE-EeCCHHHHHHHhcccCCcEEEeec---cccccccccc
Q 015424 253 QIYYARTKGADAVLLIAAVLPDL-DIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGIELIGINN---RNLAISIFSY 327 (407)
Q Consensus 253 QI~eAr~~GADaVLLiaaiL~~~-~L~~Li~~a~~LGL~aLV-EVht~eElerAl~l~Ga~iIGINn---RdL~~~~~~~ 327 (407)
|.... ..|++...++...+++. .++.+....+..++.+++ .+++.++++++.++ |++.|.++| |.+
T Consensus 190 ~~~~~-~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~-Gad~I~vs~~ggr~~------- 260 (370)
T 1gox_A 190 GKMDK-ANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLAVQH-GAAGIIVSNHGARQL------- 260 (370)
T ss_dssp C----------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHHHHHT-TCSEEEECCGGGTSS-------
T ss_pred hcccc-ccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEEEecCCHHHHHHHHHc-CCCEEEECCCCCccC-------
Confidence 54432 34666444444433332 344555566678999998 89999999999997 999999987 333
Q ss_pred cccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 328 RTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 328 t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
.+...+++...++.+.+ +.++++|+.|||.+.+|+.++..+|||+|.||++++..
T Consensus 261 --~~~~~~~~~l~~v~~~~------~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~ 315 (370)
T 1gox_A 261 --DYVPATIMALEEVVKAA------QGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFS 315 (370)
T ss_dssp --TTCCCHHHHHHHHHHHT------TTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHH
T ss_pred --CCcccHHHHHHHHHHHh------CCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHH
Confidence 33445555555555532 24689999999999999999999999999999999864
No 41
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=99.37 E-value=8.7e-12 Score=114.77 Aligned_cols=176 Identities=19% Similarity=0.194 Sum_probs=120.5
Q ss_pred HHHHHHHHHHcCCcEEEEEecCCcCCCCH----HHHHHHHhc--CCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCC
Q 015424 199 PVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 199 p~~iA~ay~~~GA~aISVLTd~~~F~Gs~----edL~~Vr~a--~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (407)
+.+.++.+.++|+++|.+- ++..-...+ +.++.+++. ..++||+..|+ +..+..+|||.|.|...-.
T Consensus 33 ~~~~~~~~~~~G~~~i~l~-~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~~~------~~~a~~~gad~v~l~~~~~ 105 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFR-EKGGDALTGEARIKFAEKAQAACREAGVPFIVNDD------VELALNLKADGIHIGQEDA 105 (227)
T ss_dssp HHHHHHHHHHHTCSEEEEC-CCSTTCCCHHHHHHHHHHHHHHHHHHTCCEEEESC------HHHHHHHTCSEEEECTTSS
T ss_pred HHHHHHHHHHCCCCEEEEe-cCCCCHhHHHHHHHHHHHHHHHHHHcCCeEEEcCH------HHHHHHcCCCEEEECCCcc
Confidence 8899999999999999875 221111222 333333321 13578887654 4568889999999965433
Q ss_pred CHHHHHHHHHHHHHcCC-cEEEEeCCHHHHHHHhcccCCcEEEeecccccccccccccc---ccccCchhHHHHhhcccc
Q 015424 273 PDLDIRYMTKICKLLGL-TALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTE---TFEVDNSNTKKLLEGERG 348 (407)
Q Consensus 273 ~~~~L~~Li~~a~~LGL-~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~---Tf~vDl~~t~~L~~~~~~ 348 (407)
+ +.+..+.+|. -+-+.+||.+|+..+... |+++|.+-. .+...++ ....+++...++.+.
T Consensus 106 ~------~~~~~~~~g~~~~~~s~~t~~e~~~a~~~-g~d~v~~~~------v~~t~~~~~~~~~~~~~~l~~~~~~--- 169 (227)
T 2tps_A 106 N------AKEVRAAIGDMILGVSAHTMSEVKQAEED-GADYVGLGP------IYPTETKKDTRAVQGVSLIEAVRRQ--- 169 (227)
T ss_dssp C------HHHHHHHHTTSEEEEEECSHHHHHHHHHH-TCSEEEECC------SSCCCSSSSCCCCCTTHHHHHHHHT---
T ss_pred C------HHHHHHhcCCcEEEEecCCHHHHHHHHhC-CCCEEEECC------CcCCCCCCCCCCccCHHHHHHHHHh---
Confidence 2 2333344675 344456999999998886 999998721 1111111 123456666666543
Q ss_pred cccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 349 EIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 349 ~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
. +++++++.|||+ ++++..+.++|+++|.||++|++.+||.+.+++|..
T Consensus 170 --~--~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~ 218 (227)
T 2tps_A 170 --G--ISIPIVGIGGIT-IDNAAPVIQAGADGVSMISAISQAEDPESAARKFRE 218 (227)
T ss_dssp --T--CCCCEEEESSCC-TTTSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHH
T ss_pred --C--CCCCEEEEcCCC-HHHHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHH
Confidence 1 137899999997 999999999999999999999999999888888764
No 42
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=99.35 E-value=3.2e-12 Score=118.14 Aligned_cols=170 Identities=16% Similarity=0.133 Sum_probs=116.7
Q ss_pred HHHHHHcCCcEEEEEecCCcCCCCHHH----HHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHH
Q 015424 203 ARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (407)
Q Consensus 203 A~ay~~~GA~aISVLTd~~~F~Gs~ed----L~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~ 278 (407)
+....++|++.|.+- .+ ..+++. ++.+++. ..|. ..++++. ++..+..+|||+|.|....++...++
T Consensus 35 ~~~~~~~G~~~v~lr--~~--~~~~~~~~~~~~~l~~~--~~~~--~~l~v~~-~~~~a~~~gad~v~l~~~~~~~~~~~ 105 (221)
T 1yad_A 35 IIITIQNEVDFIHIR--ER--SKSAADILKLLDLIFEG--GIDK--RKLVMNG-RVDIALFSTIHRVQLPSGSFSPKQIR 105 (221)
T ss_dssp HHHHHGGGCSEEEEC--CT--TSCHHHHHHHHHHHHHT--TCCG--GGEEEES-CHHHHHTTTCCEEEECTTSCCHHHHH
T ss_pred HHHHHHCCCCEEEEc--cC--CCCHHHHHHHHHHHHHh--cCcC--CeEEEeC-hHHHHHHcCCCEEEeCCCccCHHHHH
Confidence 566678899988752 22 134443 3334442 2231 1344442 46778999999999987766554443
Q ss_pred HHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccc--cccCchhHHHHhhcccccccccCCc
Q 015424 279 YMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTET--FEVDNSNTKKLLEGERGEIIRQKNI 356 (407)
Q Consensus 279 ~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~T--f~vDl~~t~~L~~~~~~~~i~~~~v 356 (407)
.+ .. |+.+.+.|||.+|+.++... |+++|++.+. ++..+.. ...+++...++.+. .++
T Consensus 106 ~~----~~-~~~ig~sv~t~~~~~~a~~~-gaD~i~~~~~------f~~~~~~g~~~~~~~~l~~~~~~--------~~~ 165 (221)
T 1yad_A 106 AR----FP-HLHIGRSVHSLEEAVQAEKE-DADYVLFGHV------FETDCKKGLEGRGVSLLSDIKQR--------ISI 165 (221)
T ss_dssp HH----CT-TCEEEEEECSHHHHHHHHHT-TCSEEEEECC------C----------CHHHHHHHHHHH--------CCS
T ss_pred HH----CC-CCEEEEEcCCHHHHHHHHhC-CCCEEEECCc------cccCCCCCCCCCCHHHHHHHHHh--------CCC
Confidence 32 22 88899999999999999986 9999999652 1111110 12334444444332 257
Q ss_pred eEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 357 IVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 357 ~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
++++.||| +++++..+.++|+++|.||+++++.+||.+.+++|..
T Consensus 166 pvia~GGI-~~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~ 210 (221)
T 1yad_A 166 PVIAIGGM-TPDRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSR 210 (221)
T ss_dssp CEEEESSC-CGGGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred CEEEECCC-CHHHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHH
Confidence 89999999 9999999999999999999999999999998888754
No 43
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=99.34 E-value=1.2e-11 Score=112.76 Aligned_cols=181 Identities=18% Similarity=0.185 Sum_probs=128.6
Q ss_pred HHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCC-CCcEEe--ccccCC-HHH-HHHHHHcCCCEEEEeccCCC
Q 015424 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLC--KEFIVD-AWQ-IYYARTKGADAVLLIAAVLP 273 (407)
Q Consensus 199 p~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v-~lPVL~--KDFIid-~~Q-I~eAr~~GADaVLLiaaiL~ 273 (407)
..++++.... |+.+|.| +++.|...+++.++.+|+. + +.|++. | +.| +.+ +..+..+|||.|.+-.. -.
T Consensus 15 ~~~~~~~~~~-~v~~iev-~~~~~~~~g~~~i~~l~~~-~~~~~i~~~l~--~~di~~~~~~~a~~~Gad~v~vh~~-~~ 88 (207)
T 3ajx_A 15 ALELAGKVAE-YVDIIEL-GTPLIKAEGLSVITAVKKA-HPDKIVFADMK--TMDAGELEADIAFKAGADLVTVLGS-AD 88 (207)
T ss_dssp HHHHHHHHGG-GCSEEEE-CHHHHHHHCTHHHHHHHHH-STTSEEEEEEE--ECSCHHHHHHHHHHTTCSEEEEETT-SC
T ss_pred HHHHHHHhhc-cCCEEEE-CcHHHHhhCHHHHHHHHHh-CCCCeEEEEEE--ecCccHHHHHHHHhCCCCEEEEecc-CC
Confidence 3455566655 7799999 6665556678889999986 5 789884 4 335 555 77789999999986443 23
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeC---CHHH-HHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhccccc
Q 015424 274 DLDIRYMTKICKLLGLTALVEVH---DERE-MDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGE 349 (407)
Q Consensus 274 ~~~L~~Li~~a~~LGL~aLVEVh---t~eE-lerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~ 349 (407)
+..+.++.+.+++.|+.+.+.++ |.++ ++.+.+. |+++|++..--. ......++.. ..+.+. .
T Consensus 89 ~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~~~-g~d~v~~~~~~~--------~~~~g~~~~~-~~i~~~-~-- 155 (207)
T 3ajx_A 89 DSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRAL-GAKFVEMHAGLD--------EQAKPGFDLN-GLLAAG-E-- 155 (207)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHT-TCSEEEEECCHH--------HHTSTTCCTH-HHHHHH-H--
T ss_pred hHHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHh-CCCEEEEEeccc--------ccccCCCchH-HHHHHh-h--
Confidence 45788899999999999878887 6666 5666665 899996642110 0111122222 333322 1
Q ss_pred ccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 350 IIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 350 ~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
+.++++++.|||+ ++++..+.++|+|+|.||++|++++||.+++++|..
T Consensus 156 ---~~~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 156 ---KARVPFSVAGGVK-VATIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRA 204 (207)
T ss_dssp ---HHTSCEEEESSCC-GGGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred ---CCCCCEEEECCcC-HHHHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHH
Confidence 1146799999996 899999999999999999999999999999988864
No 44
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=99.31 E-value=5.6e-11 Score=112.24 Aligned_cols=197 Identities=16% Similarity=0.186 Sum_probs=143.4
Q ss_pred CCCcCCCCCCC-CHHHHHHHHHHcCCcEEEEE-ecCCc---CCCCHHHHHHHHhc-CCCCcEEeccccCCHHH-HHHHHH
Q 015424 187 SPSRGILREDF-DPVEIARSYEKGGAACLSIL-TDEKY---FKGSFENLEAVRSA-GVKCPLLCKEFIVDAWQ-IYYART 259 (407)
Q Consensus 187 SPSkG~i~~~~-dp~~iA~ay~~~GA~aISVL-Td~~~---F~Gs~edL~~Vr~a-~v~lPVL~KDFIid~~Q-I~eAr~ 259 (407)
+|| .+..|+ +..+-.+..+++||+.+++= -|..| +.-++.-++.+|+. +.++|+-++=.+.+|.. +..+..
T Consensus 8 ~ps--il~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~ 85 (228)
T 3ovp_A 8 GPS--ILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAV 85 (228)
T ss_dssp EEB--CTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHH
T ss_pred eee--heeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHH
Confidence 577 566565 56777788899999999994 44444 45578899999986 25788876555666653 566788
Q ss_pred cCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHhcccCCcEEEeecccccccccccccccccc-C
Q 015424 260 KGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEV-D 335 (407)
Q Consensus 260 ~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~v-D 335 (407)
+|||.|.+-..... ++.++++.++++|+.+.+.++ +.+.++..+. .+++|-+-..+- |+....|.. .
T Consensus 86 aGad~itvH~Ea~~--~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~--~~D~Vl~msv~p-----Gf~Gq~f~~~~ 156 (228)
T 3ovp_A 86 AGANQYTFHLEATE--NPGALIKDIRENGMKVGLAIKPGTSVEYLAPWAN--QIDMALVMTVEP-----GFGGQKFMEDM 156 (228)
T ss_dssp HTCSEEEEEGGGCS--CHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGG--GCSEEEEESSCT-----TTCSCCCCGGG
T ss_pred cCCCEEEEccCCch--hHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhc--cCCeEEEeeecC-----CCCCcccCHHH
Confidence 99999999876653 577889999999999999997 3444444443 367776544332 333344543 2
Q ss_pred chhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 336 NSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 336 l~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
++...+|.+. . .++.+..-||| +++.+..+.++|||.+++|++|++++||.+++++|..
T Consensus 157 l~ki~~lr~~-----~--~~~~I~VdGGI-~~~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~ 215 (228)
T 3ovp_A 157 MPKVHWLRTQ-----F--PSLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215 (228)
T ss_dssp HHHHHHHHHH-----C--TTCEEEEESSC-STTTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHH
T ss_pred HHHHHHHHHh-----c--CCCCEEEeCCc-CHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHH
Confidence 3444444432 1 25678899999 6999999999999999999999999999999888764
No 45
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=99.30 E-value=3.7e-11 Score=113.17 Aligned_cols=201 Identities=19% Similarity=0.169 Sum_probs=141.4
Q ss_pred CCCcCCCCCCC-CHHHHHHHHHHcCCcEEEEEe-cCCcC---CCCHHHHHHHHhcCCCCcEEeccccCCHH-HHHHHHHc
Q 015424 187 SPSRGILREDF-DPVEIARSYEKGGAACLSILT-DEKYF---KGSFENLEAVRSAGVKCPLLCKEFIVDAW-QIYYARTK 260 (407)
Q Consensus 187 SPSkG~i~~~~-dp~~iA~ay~~~GA~aISVLT-d~~~F---~Gs~edL~~Vr~a~v~lPVL~KDFIid~~-QI~eAr~~ 260 (407)
+||- +..++ +..+..+...++||+.|++-. |..|. .-.++.++.+|+. ++.|+.+.=.+.||. -+..+.++
T Consensus 8 ~psi--la~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~-~~~~~~vhlmv~dp~~~i~~~~~a 84 (230)
T 1tqj_A 8 APSI--LSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPL-TKKTLDVHLMIVEPEKYVEDFAKA 84 (230)
T ss_dssp EEBG--GGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGG-CCSEEEEEEESSSGGGTHHHHHHH
T ss_pred EEEe--eecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhh-cCCcEEEEEEccCHHHHHHHHHHc
Confidence 4653 33333 677788889999999987754 33322 3356889999986 677876544555552 25668899
Q ss_pred CCCEEEEecc--CCCHHHHHHHHHHHHHcCCcEEEEe--CCHHHHHHHhcccCCcEEEeeccccccccccccccccc-cC
Q 015424 261 GADAVLLIAA--VLPDLDIRYMTKICKLLGLTALVEV--HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFE-VD 335 (407)
Q Consensus 261 GADaVLLiaa--iL~~~~L~~Li~~a~~LGL~aLVEV--ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~-vD 335 (407)
|||+|.+... .. +...++++.+++.|+.+.+.+ +|..|..+.+. .++++|++-..+- +++ ...|. ..
T Consensus 85 Gadgv~vh~e~~~~--~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~-~~~D~v~~msv~p---g~g--gq~~~~~~ 156 (230)
T 1tqj_A 85 GADIISVHVEHNAS--PHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVL-PVCDLILIMSVNP---GFG--GQSFIPEV 156 (230)
T ss_dssp TCSEEEEECSTTTC--TTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTG-GGCSEEEEESSCC---------CCCCGGG
T ss_pred CCCEEEECcccccc--hhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHH-hcCCEEEEEEecc---ccC--CccCcHHH
Confidence 9999999876 43 356788899999999999999 78777665555 3789998765544 222 22332 23
Q ss_pred chhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 336 NSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 336 l~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
++...++.+..... ..++++.+-|||+. +++..+.++|||+++||++|++++||.+++++|..
T Consensus 157 ~~~i~~lr~~~~~~---~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~ 219 (230)
T 1tqj_A 157 LPKIRALRQMCDER---GLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRN 219 (230)
T ss_dssp HHHHHHHHHHHHHH---TCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc---CCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHH
Confidence 34444444331100 11578999999976 99999999999999999999999999999998864
No 46
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=99.29 E-value=6.4e-11 Score=110.06 Aligned_cols=183 Identities=16% Similarity=0.170 Sum_probs=132.5
Q ss_pred eEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHH
Q 015424 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (407)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eA 257 (407)
.||+=+...++ .+..+++++..++|+.+|-+ ++.. ....+.++.+++ .++.+-. +.+++..++..|
T Consensus 14 ~ii~vi~~~~~--------~~~~~~~~~l~~gGv~~iel-~~k~--~~~~~~i~~~~~--~~~~~ga-g~vl~~d~~~~A 79 (207)
T 2yw3_A 14 RLLPLLTVRGG--------EDLLGLARVLEEEGVGALEI-TLRT--EKGLEALKALRK--SGLLLGA-GTVRSPKEAEAA 79 (207)
T ss_dssp CEEEEECCCSC--------CCHHHHHHHHHHTTCCEEEE-ECSS--THHHHHHHHHTT--SSCEEEE-ESCCSHHHHHHH
T ss_pred CEEEEEeCCCH--------HHHHHHHHHHHHcCCCEEEE-eCCC--hHHHHHHHHHhC--CCCEEEe-CeEeeHHHHHHH
Confidence 36666655444 26789999999999999976 4332 112344444444 3444444 346788999999
Q ss_pred HHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCch
Q 015424 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
.++|||.|++.. .+ ..+.+.++.+|+..+..|||.+|+.+|.+. |+++|++-. ...+ --++
T Consensus 80 ~~~GAd~v~~~~--~d----~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~-Gad~v~~fp-----------a~~~-gG~~ 140 (207)
T 2yw3_A 80 LEAGAAFLVSPG--LL----EEVAALAQARGVPYLPGVLTPTEVERALAL-GLSALKFFP-----------AEPF-QGVR 140 (207)
T ss_dssp HHHTCSEEEESS--CC----HHHHHHHHHHTCCEEEEECSHHHHHHHHHT-TCCEEEETT-----------TTTT-THHH
T ss_pred HHcCCCEEEcCC--CC----HHHHHHHHHhCCCEEecCCCHHHHHHHHHC-CCCEEEEec-----------Cccc-cCHH
Confidence 999999998753 22 346778888999999999999999999997 999999921 0111 0123
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCC---hHHHHHhhhc
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD---PGKGITGLFG 402 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d---p~~~i~~L~~ 402 (407)
....+... + .++++++.|||+ ++++..+.++|+++|.||++|+. .| +.+..+++..
T Consensus 141 ~lk~l~~~-----~--~~ipvvaiGGI~-~~n~~~~l~aGa~~vavgSai~~-~d~~~i~~~a~~~~~ 199 (207)
T 2yw3_A 141 VLRAYAEV-----F--PEVRFLPTGGIK-EEHLPHYAALPNLLAVGGSWLLQ-GNLEAVRAKVRAAKA 199 (207)
T ss_dssp HHHHHHHH-----C--TTCEEEEBSSCC-GGGHHHHHTCSSBSCEEESGGGS-SCHHHHHHHHHHHHH
T ss_pred HHHHHHhh-----C--CCCcEEEeCCCC-HHHHHHHHhCCCcEEEEehhhhC-CCHHHHHHHHHHHHH
Confidence 33344332 1 368999999995 89999999999999999999999 88 6777777754
No 47
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.26 E-value=7e-11 Score=112.26 Aligned_cols=192 Identities=17% Similarity=0.234 Sum_probs=123.3
Q ss_pred CCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEe---cCCc-------------CCC-----CHHHHHHH
Q 015424 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT---DEKY-------------FKG-----SFENLEAV 233 (407)
Q Consensus 175 ~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLT---d~~~-------------F~G-----s~edL~~V 233 (407)
++..+|.=+=-..|+. .+..++++.++++||++|.+-+ ||-. -+| .++.++.+
T Consensus 16 ~~~~~~~~i~~g~~~~------~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~i 89 (262)
T 1rd5_A 16 GKTAFIPYITAGDPDL------ATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREV 89 (262)
T ss_dssp TCCEEEEEEETTSSCH------HHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred CCceEEEEeeCCCCCH------HHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3456666553333332 2466789999999999999953 2211 011 24667888
Q ss_pred HhcCCCCcEEeccccCCHH---HHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEE--EeCC-HHHHHHHhcc
Q 015424 234 RSAGVKCPLLCKEFIVDAW---QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV--EVHD-EREMDRVLGI 307 (407)
Q Consensus 234 r~a~v~lPVL~KDFIid~~---QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLV--EVht-~eElerAl~l 307 (407)
|+. +++||+..++. ++. -+..+.++|||+|++. .++.+++.++++.+++.|+..+. -.++ .+.++.+...
T Consensus 90 r~~-~~~Pv~~m~~~-~~~~~~~~~~a~~aGadgv~v~--d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~ 165 (262)
T 1rd5_A 90 TPE-LSCPVVLLSYY-KPIMFRSLAKMKEAGVHGLIVP--DLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKA 165 (262)
T ss_dssp GGG-CSSCEEEECCS-HHHHSCCTHHHHHTTCCEEECT--TCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHH
T ss_pred Hhc-CCCCEEEEecC-cHHHHHHHHHHHHcCCCEEEEc--CCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhc
Confidence 876 89998765421 221 2345889999999874 34445688899999999987643 3333 4555555554
Q ss_pred cCCcEEEeecccccccccccccc--ccccCc-hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEc
Q 015424 308 EGIELIGINNRNLAISIFSYRTE--TFEVDN-SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVG 384 (407)
Q Consensus 308 ~Ga~iIGINnRdL~~~~~~~t~~--Tf~vDl-~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVG 384 (407)
+..++.+-. .+|+|.. .+..+. +...++.+. .++++++.|||+|++++..+.++|||+|+||
T Consensus 166 -~~g~v~~~s------~~G~tG~~~~~~~~~~~~i~~v~~~--------~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 166 -SEGFVYLVS------VNGVTGPRANVNPRVESLIQEVKKV--------TNKPVAVGFGISKPEHVKQIAQWGADGVIIG 230 (262)
T ss_dssp -CCSCEEEEC------SSCCBCTTSCBCTHHHHHHHHHHHH--------CSSCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred -CCCeEEEec------CCCCCCCCcCCCchHHHHHHHHHhh--------cCCeEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 444555532 2344433 232211 222333222 2578999999999999999999999999999
Q ss_pred ccccCCC
Q 015424 385 ESIVKQD 391 (407)
Q Consensus 385 eaLmk~~ 391 (407)
++|++..
T Consensus 231 Sai~~~~ 237 (262)
T 1rd5_A 231 SAMVRQL 237 (262)
T ss_dssp HHHHHHH
T ss_pred hHHHhHH
Confidence 9999763
No 48
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=99.26 E-value=2e-10 Score=107.24 Aligned_cols=190 Identities=18% Similarity=0.204 Sum_probs=132.0
Q ss_pred CHHHHHHHHHHcCCcEEEEEe-cCCcCCC---CHHHHHHHHhcCCCCcEEeccccCCHH-HHHHHHHcCCCEEEEeccCC
Q 015424 198 DPVEIARSYEKGGAACLSILT-DEKYFKG---SFENLEAVRSAGVKCPLLCKEFIVDAW-QIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLT-d~~~F~G---s~edL~~Vr~a~v~lPVL~KDFIid~~-QI~eAr~~GADaVLLiaaiL 272 (407)
+..+.++...++||+.|++-. |..|+.. +++.++.+|+. ++.|+.+.=++.|+. .+..+..+|||+|.+-....
T Consensus 20 ~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~-~~~~~~v~lmv~d~~~~i~~~~~agad~v~vH~~~~ 98 (228)
T 1h1y_A 20 NLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKH-TKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVS 98 (228)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTT-CCSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGGGC
T ss_pred HHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhh-cCCcEEEEEEecCHHHHHHHHHHcCCCEEEECCCCc
Confidence 667788889999999988762 3333332 47889999986 666766555666652 26778889999998866543
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEe--CCHHHHHHHhccc--CCcEEEeeccccccccccccccccccC-chhHHHHhhccc
Q 015424 273 PDLDIRYMTKICKLLGLTALVEV--HDEREMDRVLGIE--GIELIGINNRNLAISIFSYRTETFEVD-NSNTKKLLEGER 347 (407)
Q Consensus 273 ~~~~L~~Li~~a~~LGL~aLVEV--ht~eElerAl~l~--Ga~iIGINnRdL~~~~~~~t~~Tf~vD-l~~t~~L~~~~~ 347 (407)
+. .+.++++.+++.|+.+.+.+ +|..|..+...-. ++++|++-..+- +++...|... ++...++.+.
T Consensus 99 ~~-~~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~p-----g~~g~~~~~~~l~~i~~~~~~-- 170 (228)
T 1h1y_A 99 RD-NWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEP-----GFGGQKFMPEMMEKVRALRKK-- 170 (228)
T ss_dssp TT-THHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCT-----TCSSCCCCGGGHHHHHHHHHH--
T ss_pred cc-HHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecC-----CCCcccCCHHHHHHHHHHHHh--
Confidence 32 22677888888999999999 5554433333211 678998855443 2222344322 2233333332
Q ss_pred ccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 348 GEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 348 ~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
. .++++++.|||+. +++..+.++|+|+++||++|++++||.+.+++|..
T Consensus 171 ---~--~~~pi~v~GGI~~-~ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~~ 219 (228)
T 1h1y_A 171 ---Y--PSLDIEVDGGLGP-STIDVAASAGANCIVAGSSIFGAAEPGEVISALRK 219 (228)
T ss_dssp ---C--TTSEEEEESSCST-TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHH
T ss_pred ---c--CCCCEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHH
Confidence 1 2578999999965 99999999999999999999999999999988854
No 49
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=99.21 E-value=1.4e-10 Score=111.05 Aligned_cols=201 Identities=18% Similarity=0.200 Sum_probs=143.8
Q ss_pred cCCCcCCCCCCC-CHHHHHHHHHHcCCcEEEEEe-cCCc---CCCCHHHHHHHHhcCC-CCcEEeccccCCHHH-HHHHH
Q 015424 186 ASPSRGILREDF-DPVEIARSYEKGGAACLSILT-DEKY---FKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQ-IYYAR 258 (407)
Q Consensus 186 aSPSkG~i~~~~-dp~~iA~ay~~~GA~aISVLT-d~~~---F~Gs~edL~~Vr~a~v-~lPVL~KDFIid~~Q-I~eAr 258 (407)
-+|| .+..|+ +..+-.+..+++||+.+++=. |..| +.=++.-++.+|+. + ++|+.+.=.+.+|.. +..+.
T Consensus 30 i~pS--ilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~-~p~~~ldvHLmv~~p~~~i~~~~ 106 (246)
T 3inp_A 30 INPS--ILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDY-GITAGMDVHLMVKPVDALIESFA 106 (246)
T ss_dssp EEEB--GGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHH-TCCSCEEEEEECSSCHHHHHHHH
T ss_pred eehh--hhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHh-CCCCeEEEEEeeCCHHHHHHHHH
Confidence 4788 466665 577888889999999999954 4444 35578899999987 6 899877555666654 55678
Q ss_pred HcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCC---HHHHHHHhcccCCcEEEeeccccccccccccccccccC
Q 015424 259 TKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHD---EREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVD 335 (407)
Q Consensus 259 ~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht---~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vD 335 (407)
.+|||.|.+-....+ ++.+.++.++++|+.+-+.++. .+.++..+. .+++|-+=..+- | +....|..+
T Consensus 107 ~aGAd~itvH~Ea~~--~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~--~vD~VlvMsV~P---G--fgGQ~fi~~ 177 (246)
T 3inp_A 107 KAGATSIVFHPEASE--HIDRSLQLIKSFGIQAGLALNPATGIDCLKYVES--NIDRVLIMSVNP---G--FGGQKFIPA 177 (246)
T ss_dssp HHTCSEEEECGGGCS--CHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGG--GCSEEEEECSCT---T--C--CCCCTT
T ss_pred HcCCCEEEEccccch--hHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHh--cCCEEEEeeecC---C--CCCcccchH
Confidence 999999999877653 5788999999999999999973 333333333 467776543332 2 223444332
Q ss_pred -chhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 336 -NSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 336 -l~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
++...+|.+.+... ..++.+..-|||+ ++.+..+.++|||.+++|++|++++||.+++++|..
T Consensus 178 ~l~KI~~lr~~~~~~---~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~ 241 (246)
T 3inp_A 178 MLDKAKEISKWISST---DRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRD 241 (246)
T ss_dssp HHHHHHHHHHHHHHH---TSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc---CCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHH
Confidence 34444444331110 1246788999995 899999999999999999999999999999888754
No 50
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.21 E-value=8.7e-11 Score=123.72 Aligned_cols=185 Identities=20% Similarity=0.212 Sum_probs=129.8
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecCCcCCCC-HHHHHHHH---hcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccC
Q 015424 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGS-FENLEAVR---SAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs-~edL~~Vr---~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (407)
..+..+..+...++|+.+|.+- ++..-... .+..+.++ +. .++|++..|. ++.|.++|||+|+|...-
T Consensus 24 ~~~l~~~ve~al~~Gv~~vQlR-~K~~~~~~~~~~a~~l~~l~~~-~~v~liIND~------~dlA~~~gAdGVHLgq~d 95 (540)
T 3nl6_A 24 GKTLYGQVEAGLQNGVTLVQIR-EKDADTKFFIEEALQIKELCHA-HNVPLIINDR------IDVAMAIGADGIHVGQDD 95 (540)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEC-CSSSCTTHHHHHHHHHHHHHHH-TTCCEEECSC------SHHHHHTTCSEEEECTTS
T ss_pred cchHHHHHHHHHHCCCCEEEEe-cCCCCHHHHHHHHHHHHHHHHh-cCCEEEEeCc------HHHHHHcCCCEEEEChhh
Confidence 3478888889999999998873 22211111 12222222 22 4788887774 344888999999999988
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccC---CcEEEeeccccccccccccccccc----cCchhHHHHhh
Q 015424 272 LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEG---IELIGINNRNLAISIFSYRTETFE----VDNSNTKKLLE 344 (407)
Q Consensus 272 L~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~G---a~iIGINnRdL~~~~~~~t~~Tf~----vDl~~t~~L~~ 344 (407)
++..+.+.++ ..++-.-+-|||.+|+.+|.+. | +|+||+ +|.|+++++.-. +.++...++.+
T Consensus 96 l~~~~ar~~l----g~~~iiG~S~ht~eea~~A~~~-G~~~aDYv~~------Gpvf~T~tK~~~~~~~~G~~~l~~i~~ 164 (540)
T 3nl6_A 96 MPIPMIRKLV----GPDMVIGWSVGFPEEVDELSKM-GPDMVDYIGV------GTLFPTLTKKNPKKAPMGTAGAIRVLD 164 (540)
T ss_dssp SCHHHHHHHH----CTTSEEEEEECSHHHHHHHHHT-CC--CCEEEE------SCCSCCCCCC----CCCHHHHHHHHHH
T ss_pred cCHHHHHHHh----CCCCEEEEECCCHHHHHHHHHc-CCCCCCEEEE------cCCCCCCCCCCcCCCCCCHHHHHHHHH
Confidence 8765444332 2366777889999999999997 9 999999 455665444321 33555555554
Q ss_pred cccccccccCCceEEEeeCCCCHHHHHHHHH--------cCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 345 GERGEIIRQKNIIVVGESGLFTPDDIAYVQE--------AGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 345 ~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~--------~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
.+... ...++++|+.||| +++++..+.. +|+++|.|+++||.++||.+++++|..
T Consensus 165 ~~~~~--~~~~iPvvAIGGI-~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~dp~~a~~~l~~ 227 (540)
T 3nl6_A 165 ALERN--NAHWCRTVGIGGL-HPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRG 227 (540)
T ss_dssp HHHHT--TCTTCEEEEESSC-CTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTCTTHHHHHHHHHH
T ss_pred HHHhh--ccCCCCEEEEcCC-CHHHHHHHHHhhcccccccCceEEEEeHHHhcCCCHHHHHHHHHH
Confidence 31100 0126899999999 8999999998 899999999999999999999988854
No 51
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.21 E-value=2.1e-10 Score=110.14 Aligned_cols=192 Identities=18% Similarity=0.172 Sum_probs=123.1
Q ss_pred CCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEe---cCCcCCC-------------------CHHHHHH
Q 015424 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT---DEKYFKG-------------------SFENLEA 232 (407)
Q Consensus 175 ~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLT---d~~~F~G-------------------s~edL~~ 232 (407)
++..+|.=+=-..|+.. ...++++.++++||++|.+-. ||- ..| .++.++.
T Consensus 15 ~~~~~i~~i~~gdp~~~------~~~~~~~~l~~~GaD~ieig~P~sdp~-~DG~~i~~a~~~al~~G~~~~~~~~~v~~ 87 (268)
T 1qop_A 15 REGAFVPFVTLGDPGIE------QSLKIIDTLIDAGADALELGVPFSDPL-ADGPTIQNANLRAFAAGVTPAQCFEMLAI 87 (268)
T ss_dssp TCCEEEEEEETTSSCHH------HHHHHHHHHHHTTCSSEEEECCCSCCT-TCCHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCceEEEEeeCCCCCHH------HHHHHHHHHHHCCCCEEEECCCCCCcc-CCCHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 34566666633344321 456789999999999999954 111 111 2466888
Q ss_pred HHhcCCCCcEEec---c--ccCC-HHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEE---EeCCHHHHHH
Q 015424 233 VRSAGVKCPLLCK---E--FIVD-AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV---EVHDEREMDR 303 (407)
Q Consensus 233 Vr~a~v~lPVL~K---D--FIid-~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLV---EVht~eEler 303 (407)
+|+..+++||+.- + |+.. ..-+..+..+|||+|++. .++.+++.++++.+++.|++.+. ..++.+.++.
T Consensus 88 ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~--d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~ 165 (268)
T 1qop_A 88 IREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVA--DVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQ 165 (268)
T ss_dssp HHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEET--TCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHH
T ss_pred HHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEc--CCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 8875368998641 1 1111 234666889999998774 44456788999999999987532 3345666666
Q ss_pred HhcccCCcEEEeecccccccccccccc--ccccCc-hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCE
Q 015424 304 VLGIEGIELIGINNRNLAISIFSYRTE--TFEVDN-SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKA 380 (407)
Q Consensus 304 Al~l~Ga~iIGINnRdL~~~~~~~t~~--Tf~vDl-~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gada 380 (407)
.... +..++-+-. ..|+|.. .+..+. +...++.+. .+++++..+||+|++++.++..+|||+
T Consensus 166 i~~~-~~g~v~~~s------~~G~tG~~~~~~~~~~~~i~~lr~~--------~~~pi~vggGI~t~e~~~~~~~agAD~ 230 (268)
T 1qop_A 166 VASY-GRGYTYLLS------RSGVTGAENRGALPLHHLIEKLKEY--------HAAPALQGFGISSPEQVSAAVRAGAAG 230 (268)
T ss_dssp HHHH-CCSCEEEES------SSSCCCSSSCC--CCHHHHHHHHHT--------TCCCEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHhh-CCCcEEEEe------cCCcCCCccCCCchHHHHHHHHHhc--------cCCcEEEECCCCCHHHHHHHHHcCCCE
Confidence 6654 333332211 1223322 233333 444444432 256789999999999999989999999
Q ss_pred EEEcccccCC
Q 015424 381 VLVGESIVKQ 390 (407)
Q Consensus 381 VLVGeaLmk~ 390 (407)
|+||++|++.
T Consensus 231 vVVGSai~~~ 240 (268)
T 1qop_A 231 AISGSAIVKI 240 (268)
T ss_dssp EEECHHHHHH
T ss_pred EEEChHHhhh
Confidence 9999999876
No 52
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=99.20 E-value=1e-10 Score=114.02 Aligned_cols=193 Identities=15% Similarity=0.124 Sum_probs=132.3
Q ss_pred HHHHHHHHcCCcEEEEEecCCcCC------------CCHHH-----HHHHHhcCCCCcEEeccccCCH----HH-HHHHH
Q 015424 201 EIARSYEKGGAACLSILTDEKYFK------------GSFEN-----LEAVRSAGVKCPLLCKEFIVDA----WQ-IYYAR 258 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVLTd~~~F~------------Gs~ed-----L~~Vr~a~v~lPVL~KDFIid~----~Q-I~eAr 258 (407)
--|+..+++||+-|-++.-..|-. |+-.+ -.+|--...++||++.=.-+|| .. +.+.+
T Consensus 39 lsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk 118 (286)
T 2p10_A 39 LSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELK 118 (286)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHH
T ss_pred hhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHH
Confidence 479999999999998864333211 11111 1122222137899976222333 34 44568
Q ss_pred HcCCCEEEEecc----------------CCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeecc----
Q 015424 259 TKGADAVLLIAA----------------VLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNR---- 318 (407)
Q Consensus 259 ~~GADaVLLiaa----------------iL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnR---- 318 (407)
++|+.+| ++.. -++-++..++++.|+++||..++.|.|.+|...+.++ |+|+|-++.-
T Consensus 119 ~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~a-gpDiI~~h~glT~g 196 (286)
T 2p10_A 119 EIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKA-GADILVCHMGLTTG 196 (286)
T ss_dssp HHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHH-TCSEEEEECSCC--
T ss_pred HhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHc-CCCEEEECCCCCCC
Confidence 9999999 8876 2244667889999999999999999999999999998 9999999876
Q ss_pred ccccccccccccccccCchhHHHHhhcccccccccCCceEEEee-CCCCHHHHHHHHHc--CCCEEEEcccccCCCChHH
Q 015424 319 NLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGES-GLFTPDDIAYVQEA--GVKAVLVGESIVKQDDPGK 395 (407)
Q Consensus 319 dL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAES-GI~t~eD~~~l~~~--GadaVLVGeaLmk~~dp~~ 395 (407)
.+|+++.+.+..+ -.+...++.+..+. + .+++.+++-+ ||.+++|+.++.+. |++|++.++++.+.+ |.+
T Consensus 197 glIG~~~avs~~~---~~e~i~~i~~a~~~--v-npdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASsier~p-~e~ 269 (286)
T 2p10_A 197 GAIGARSGKSMDD---CVSLINECIEAART--I-RDDIIILSHGGPIANPEDARFILDSCQGCHGFYGASSMERLP-AEE 269 (286)
T ss_dssp -------CCCHHH---HHHHHHHHHHHHHH--H-CSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHHHHHHH-HHH
T ss_pred CcccCCCcccHHH---hHHHHHHHHHHHHH--h-CCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehhhhcCC-HHH
Confidence 6766544433222 01222233322211 2 2467777776 99999999999999 999999999999999 999
Q ss_pred HHHhhhc
Q 015424 396 GITGLFG 402 (407)
Q Consensus 396 ~i~~L~~ 402 (407)
+++++..
T Consensus 270 ai~~~~~ 276 (286)
T 2p10_A 270 AIRSQTL 276 (286)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 53
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=99.20 E-value=1.5e-10 Score=110.27 Aligned_cols=174 Identities=17% Similarity=0.226 Sum_probs=133.9
Q ss_pred eEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHH
Q 015424 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (407)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eA 257 (407)
.||+=+.-.+|. +..++|+++.++|+.+|-| |... .+..+.++.+++. +.-.++--+-+++..|+..|
T Consensus 35 ~vv~Vir~~~~~--------~a~~~a~al~~gGi~~iEv-t~~t--~~a~e~I~~l~~~-~~~~~iGaGTVlt~~~a~~A 102 (232)
T 4e38_A 35 KVIPVIAIDNAE--------DIIPLGKVLAENGLPAAEI-TFRS--DAAVEAIRLLRQA-QPEMLIGAGTILNGEQALAA 102 (232)
T ss_dssp CEEEEECCSSGG--------GHHHHHHHHHHTTCCEEEE-ETTS--TTHHHHHHHHHHH-CTTCEEEEECCCSHHHHHHH
T ss_pred CEEEEEEcCCHH--------HHHHHHHHHHHCCCCEEEE-eCCC--CCHHHHHHHHHHh-CCCCEEeECCcCCHHHHHHH
Confidence 477777665554 7889999999999999998 2221 2457888888876 43345555567899999999
Q ss_pred HHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCch
Q 015424 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
..+|||.|+.-. ++ .++++.|+++|+..+.-|.|..|+.+|+++ |+++|.+-..+. . -.++
T Consensus 103 i~AGA~fIvsP~--~~----~~vi~~~~~~gi~~ipGv~TptEi~~A~~~-Gad~vK~FPa~~-----------~-gG~~ 163 (232)
T 4e38_A 103 KEAGATFVVSPG--FN----PNTVRACQEIGIDIVPGVNNPSTVEAALEM-GLTTLKFFPAEA-----------S-GGIS 163 (232)
T ss_dssp HHHTCSEEECSS--CC----HHHHHHHHHHTCEEECEECSHHHHHHHHHT-TCCEEEECSTTT-----------T-THHH
T ss_pred HHcCCCEEEeCC--CC----HHHHHHHHHcCCCEEcCCCCHHHHHHHHHc-CCCEEEECcCcc-----------c-cCHH
Confidence 999999998643 22 346788999999999999999999999998 999999843211 1 1233
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
..+.|..- + .++.+++.||| +++++....++|+.++++|+.|+..
T Consensus 164 ~lkal~~p-----~--p~ip~~ptGGI-~~~n~~~~l~aGa~~~vgGs~l~~~ 208 (232)
T 4e38_A 164 MVKSLVGP-----Y--GDIRLMPTGGI-TPSNIDNYLAIPQVLACGGTWMVDK 208 (232)
T ss_dssp HHHHHHTT-----C--TTCEEEEBSSC-CTTTHHHHHTSTTBCCEEECGGGCH
T ss_pred HHHHHHHH-----h--cCCCeeeEcCC-CHHHHHHHHHCCCeEEEECchhcCh
Confidence 44444432 2 36899999999 5999999999999999999999864
No 54
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.18 E-value=1.7e-10 Score=114.18 Aligned_cols=149 Identities=17% Similarity=0.175 Sum_probs=100.4
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecC----------CcCCCCHHHHHHHHhcCCCCcEEec--cccCCHHHHHHHHHcCCC
Q 015424 196 DFDPVEIARSYEKGGAACLSILTDE----------KYFKGSFENLEAVRSAGVKCPLLCK--EFIVDAWQIYYARTKGAD 263 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLTd~----------~~F~Gs~edL~~Vr~a~v~lPVL~K--DFIid~~QI~eAr~~GAD 263 (407)
.+++..+++.++..||++|.+..+. ..|.+.++.++.+|+. +++||+.| +++.++.++..+.++|||
T Consensus 126 ~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~-~~~Pv~vK~~~~~~~~~~a~~a~~~Gad 204 (349)
T 1p0k_A 126 EATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSR-VSVPVIVKEVGFGMSKASAGKLYEAGAA 204 (349)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHH-CSSCEEEEEESSCCCHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHH-cCCCEEEEecCCCCCHHHHHHHHHcCCC
Confidence 5678888999999999999998762 3455667889999987 89999999 688899999999999999
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHh
Q 015424 264 AVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLL 343 (407)
Q Consensus 264 aVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~ 343 (407)
+|.+...--+. ... ++..+..+ . ....... | + .+ .....++.
T Consensus 205 ~I~v~~~ggt~--~~~-~e~~r~~~--------~---~~~~~~~------g-----~---------~~----~~~l~~v~ 246 (349)
T 1p0k_A 205 AVDIGGYGGTN--FSK-IENLRRQR--------Q---ISFFNSW------G-----I---------ST----AASLAEIR 246 (349)
T ss_dssp EEEEEC------------------C--------C---GGGGTTC------S-----C---------CH----HHHHHHHH
T ss_pred EEEEcCCCCcc--hhh-HHHhhccc--------c---hhhhhcc------C-----c---------cH----HHHHHHHH
Confidence 99997531110 100 11112211 0 0000000 0 1 11 11223333
Q ss_pred hcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 344 EGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 344 ~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
+. + .++++|+.|||++++|+.++..+|||+|.||++++..
T Consensus 247 ~~-----~--~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~ 286 (349)
T 1p0k_A 247 SE-----F--PASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKA 286 (349)
T ss_dssp HH-----C--TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred Hh-----c--CCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHH
Confidence 32 1 3689999999999999999999999999999999986
No 55
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.14 E-value=7.4e-10 Score=111.23 Aligned_cols=175 Identities=16% Similarity=0.143 Sum_probs=117.6
Q ss_pred HHHHHHHH-HcCCcEEEEEecCCcCCCCHH----HHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCH
Q 015424 200 VEIARSYE-KGGAACLSILTDEKYFKGSFE----NLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (407)
Q Consensus 200 ~~iA~ay~-~~GA~aISVLTd~~~F~Gs~e----dL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~ 274 (407)
.++|.+.. ++|...|+ .. -+.+ .++.+|+. .++|+-..-++.+..++..+.++|||.|.|..+.-..
T Consensus 59 ~~lA~avA~~GGlgii~-----~~--~s~e~~~~~I~~vk~~-~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~~ 130 (361)
T 3khj_A 59 HLMAVGMARLGGIGIIH-----KN--MDMESQVNEVLKVKNS-GGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHS 130 (361)
T ss_dssp HHHHHHHHHTTCEEEEC-----SS--SCHHHHHHHHHHHHHT-TCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCSB
T ss_pred HHHHHHHHHcCCCeEEe-----cC--CCHHHHHHHHHHHHhc-cCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCCc
Confidence 47777655 45533332 11 1343 34455554 5788776655555667788899999999997776544
Q ss_pred HHHHHHHHHHHH-cCCcEEE-EeCCHHHHHHHhcccCCcEEEeecccccccccccccc---cc-ccCchhHHHHhhcccc
Q 015424 275 LDIRYMTKICKL-LGLTALV-EVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTE---TF-EVDNSNTKKLLEGERG 348 (407)
Q Consensus 275 ~~L~~Li~~a~~-LGL~aLV-EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~---Tf-~vDl~~t~~L~~~~~~ 348 (407)
..+.+.++.+++ +++.+++ .|++.++++.+.++ |++.|.+.. +++...++. .+ .+++....++.+..+
T Consensus 131 ~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~a-GaD~I~VG~----~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~- 204 (361)
T 3khj_A 131 LNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIEN-GADGIKVGI----GPGSICTTRIVAGVGVPQITAIEKCSSVAS- 204 (361)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHT-TCSEEEECS----SCCTTCCHHHHTCBCCCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHc-CcCEEEEec----CCCcCCCcccccCCCCCcHHHHHHHHHHHh-
Confidence 455555555544 6999997 99999999999997 999998821 122111111 11 233443444432211
Q ss_pred cccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015424 349 EIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 349 ~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 392 (407)
..++++|+.|||.+++|+.++..+||++|.||++|+..++
T Consensus 205 ----~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t~E 244 (361)
T 3khj_A 205 ----KFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEE 244 (361)
T ss_dssp ----HHTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTT
T ss_pred ----hcCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCc
Confidence 1257999999999999999999999999999999998765
No 56
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=99.14 E-value=2.3e-09 Score=100.25 Aligned_cols=176 Identities=12% Similarity=0.154 Sum_probs=129.2
Q ss_pred eEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHH
Q 015424 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (407)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eA 257 (407)
.||+=+...++. +..+++++..++|+.+|-+ |+.. .+..+-++.+++...++ ++.-+.+++..++..|
T Consensus 17 ~~i~v~r~~~~~--------~~~~~~~al~~gGv~~iel-~~k~--~~~~~~i~~l~~~~~~~-~vgagtvi~~d~~~~A 84 (214)
T 1wbh_A 17 PVVPVIVVKKLE--------HAVPMAKALVAGGVRVLNV-TLRT--ECAVDAIRAIAKEVPEA-IVGAGTVLNPQQLAEV 84 (214)
T ss_dssp SEEEEECCSSGG--------GHHHHHHHHHHTTCCEEEE-ESCS--TTHHHHHHHHHHHCTTS-EEEEESCCSHHHHHHH
T ss_pred CEEEEEECCCHH--------HHHHHHHHHHHcCCCEEEE-eCCC--hhHHHHHHHHHHHCcCC-EEeeCEEEEHHHHHHH
Confidence 477766655543 6778999999999998876 3432 23456666666541233 3334557899999999
Q ss_pred HHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCch
Q 015424 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
.++|||.|++.. . + ..+.+.++.+|++.+.-|||.+|+.+|.++ |+++|++ + + .... ..++
T Consensus 85 ~~aGAd~v~~p~--~-d---~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~-Gad~v~~----F-----p--a~~~-gG~~ 145 (214)
T 1wbh_A 85 TEAGAQFAISPG--L-T---EPLLKAATEGTIPLIPGISTVSELMLGMDY-GLKEFKF----F-----P--AEAN-GGVK 145 (214)
T ss_dssp HHHTCSCEEESS--C-C---HHHHHHHHHSSSCEEEEESSHHHHHHHHHT-TCCEEEE----T-----T--TTTT-THHH
T ss_pred HHcCCCEEEcCC--C-C---HHHHHHHHHhCCCEEEecCCHHHHHHHHHC-CCCEEEE----e-----c--Cccc-cCHH
Confidence 999999998764 2 2 346788899999999999999999999997 9999999 2 1 0111 0133
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHc-CCCEEEEcccccCCCCh
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA-GVKAVLVGESIVKQDDP 393 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~-GadaVLVGeaLmk~~dp 393 (407)
....+... + +++++++-||| +++++..+.++ |+++|- |++|++++++
T Consensus 146 ~lk~i~~~-----~--~~ipvvaiGGI-~~~n~~~~l~agg~~~v~-gS~i~~~~~~ 193 (214)
T 1wbh_A 146 ALQAIAGP-----F--SQVRFCPTGGI-SPANYRDYLALKSVLCIG-GSWLVPADAL 193 (214)
T ss_dssp HHHHHHTT-----C--TTCEEEEBSSC-CTTTHHHHHTSTTBSCEE-EGGGSCHHHH
T ss_pred HHHHHhhh-----C--CCCeEEEECCC-CHHHHHHHHhcCCCeEEE-eccccChhhh
Confidence 34444432 1 26899999999 78999999999 999999 9999987653
No 57
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=99.11 E-value=8.1e-10 Score=104.66 Aligned_cols=201 Identities=14% Similarity=0.104 Sum_probs=138.8
Q ss_pred CCCcCCCCCCC-CHHHHHHHHHHcCCcEEEEEe-cCCc---CCCCHHHHHHHHhcCCCCcEEeccccCCHHH-HHHHHHc
Q 015424 187 SPSRGILREDF-DPVEIARSYEKGGAACLSILT-DEKY---FKGSFENLEAVRSAGVKCPLLCKEFIVDAWQ-IYYARTK 260 (407)
Q Consensus 187 SPSkG~i~~~~-dp~~iA~ay~~~GA~aISVLT-d~~~---F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~Q-I~eAr~~ 260 (407)
||| .+..|+ +..+-.+.. ++||+.+++-. |..| +.=++.-++.+|+. ++.|+.+-=-+.||.. +..+..+
T Consensus 4 ~pS--ila~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~-~~~~~dvhLmv~dp~~~i~~~~~a 79 (231)
T 3ctl_A 4 SPS--LMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKL-ATKPLDCHLMVTRPQDYIAQLARA 79 (231)
T ss_dssp EEB--GGGSCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTT-CCSCEEEEEESSCGGGTHHHHHHH
T ss_pred Eee--hhhCChhhHHHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhc-cCCcEEEEEEecCHHHHHHHHHHc
Confidence 566 455555 666666777 89999988753 3332 23357899999986 7888876555566654 6678899
Q ss_pred CCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC--CHHHHHHHhcccCCcEEEeecccccccccccccccccc-Cch
Q 015424 261 GADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH--DEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEV-DNS 337 (407)
Q Consensus 261 GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh--t~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~v-Dl~ 337 (407)
|||.|.+-...+++ .+.++++.++++|+.+.+.++ |..|..+.+- .++++|-+=..+- |++ ...|.. .++
T Consensus 80 GAd~itvh~Ea~~~-~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l-~~~D~VlvmsV~p---Gfg--gQ~f~~~~l~ 152 (231)
T 3ctl_A 80 GADFITLHPETING-QAFRLIDEIRRHDMKVGLILNPETPVEAMKYYI-HKADKITVMTVDP---GFA--GQPFIPEMLD 152 (231)
T ss_dssp TCSEEEECGGGCTT-THHHHHHHHHHTTCEEEEEECTTCCGGGGTTTG-GGCSEEEEESSCT---TCS--SCCCCTTHHH
T ss_pred CCCEEEECcccCCc-cHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHH-hcCCEEEEeeecc---CcC--CccccHHHHH
Confidence 99999998777333 578899999999999988886 4433322222 2688887644443 333 234432 233
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEc-ccccCCCC-hHHHHHhhhc
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVG-ESIVKQDD-PGKGITGLFG 402 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVG-eaLmk~~d-p~~~i~~L~~ 402 (407)
...+|.+..... ..++.+.+-||| +++.+..+.++|||.+++| ++|++++| |.+.+++|..
T Consensus 153 kI~~lr~~~~~~---~~~~~I~VdGGI-~~~~~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l~~ 215 (231)
T 3ctl_A 153 KLAELKAWRERE---GLEYEIEVDGSC-NQATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTA 215 (231)
T ss_dssp HHHHHHHHHHHH---TCCCEEEEESCC-STTTHHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHHHH
T ss_pred HHHHHHHHHhcc---CCCceEEEECCc-CHHHHHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHHHH
Confidence 333443321100 125778899999 5899999999999999999 99999989 9988888743
No 58
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=99.11 E-value=3.9e-10 Score=109.12 Aligned_cols=185 Identities=21% Similarity=0.128 Sum_probs=124.1
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCCcC-CCCHHHH-HHHHhcCCCCcEEeccccC-CHHHHHH----HH-HcCCCEEEEe
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEKYF-KGSFENL-EAVRSAGVKCPLLCKEFIV-DAWQIYY----AR-TKGADAVLLI 268 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~~F-~Gs~edL-~~Vr~a~v~lPVL~KDFIi-d~~QI~e----Ar-~~GADaVLLi 268 (407)
-++..+.++....||.-+-|-+-..-. .+..+++ ..++ .+++|-.+-.. +..+... ++ ..|-+-|=|=
T Consensus 23 ~~~~~~~~ai~asg~eivtva~rR~~~~~~~~~~~~~~i~----~~~~lpntaG~~taeeAv~~a~lare~~gt~~iKlE 98 (268)
T 2htm_A 23 EDFGVMREAIAAAKAEVVTVSVRRVELKAPGHVGLLEALE----GVRLLPNTAGARTAEEAVRLARLGRLLTGERWVKLE 98 (268)
T ss_dssp SCHHHHHHHHHHTTCSEEEEEEEECC-------CHHHHTT----TSEEEEBCTTCCSHHHHHHHHHHHHHHHCCSEEBCC
T ss_pred CCHHHHHHHHHHhCCCEEEEEccccCCCCCCcccHHHHHh----hhhccCcccCCCCHHHHHHHHHhhhHhcCcceeeee
Confidence 378889999999999998887654432 1122333 3333 46777555332 2222211 34 3466644321
Q ss_pred ----ccCCCHHHHHHHHHHHHHc---CCcEE-EEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHH
Q 015424 269 ----AAVLPDLDIRYMTKICKLL---GLTAL-VEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTK 340 (407)
Q Consensus 269 ----aaiL~~~~L~~Li~~a~~L---GL~aL-VEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~ 340 (407)
...|. .|..++++.|+.| |+.+| +...|...+++..++ |+++| ...-.+||++.|.++ .....
T Consensus 99 vi~d~~~l~-pD~~~tv~aa~~L~k~Gf~Vlpy~~~D~~~ak~l~~~-G~~aV-mPlg~pIGsG~Gi~~------~~~L~ 169 (268)
T 2htm_A 99 VIPDPTYLL-PDPLETLKAAERLIEEDFLVLPYMGPDLVLAKRLAAL-GTATV-MPLAAPIGSGWGVRT------RALLE 169 (268)
T ss_dssp CCSCTTTTC-CCHHHHHHHHHHHHHTTCEECCEECSCHHHHHHHHHH-TCSCB-EEBSSSTTTCCCSTT------HHHHH
T ss_pred eccCccccC-cCHHHHHHHHHHHHHCCCEEeeccCCCHHHHHHHHhc-CCCEE-EecCccCcCCcccCC------HHHHH
Confidence 11222 2567889999999 99999 778899988998887 99888 433445566655543 22334
Q ss_pred HHhhcccccccccCC-ceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015424 341 KLLEGERGEIIRQKN-IIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 401 (407)
Q Consensus 341 ~L~~~~~~~~i~~~~-v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 401 (407)
.+.+. ..+ ++||++|||.||+|+..++++|||||+||++|+++.||.+..+.+.
T Consensus 170 ~i~~~-------~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~ 224 (268)
T 2htm_A 170 LFARE-------KASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAEAQDPPAMAEAFR 224 (268)
T ss_dssp HHHHT-------TTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHTSSSHHHHHHHHH
T ss_pred HHHHh-------cCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHH
Confidence 44431 124 7899999999999999999999999999999999999987776664
No 59
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=99.10 E-value=6.5e-10 Score=107.64 Aligned_cols=193 Identities=19% Similarity=0.206 Sum_probs=123.8
Q ss_pred CCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEE---ecCCc----CC---------C-----CHHHHHHH
Q 015424 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSIL---TDEKY----FK---------G-----SFENLEAV 233 (407)
Q Consensus 175 ~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVL---Td~~~----F~---------G-----s~edL~~V 233 (407)
++.++|.=+=-.-|+. ..-.+++++++++||+.|.+- +||-+ .+ | -++.++.+
T Consensus 16 ~~~ali~yi~aGdP~~------~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~i 89 (267)
T 3vnd_A 16 DKGAFVPFVTIGDPSP------ELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKV 89 (267)
T ss_dssp TCCEEEEEEETTSSCH------HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCH------HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4567777662222221 135678899999999999986 23311 11 1 15777778
Q ss_pred HhcCCCCcEEeccccCCHH------HHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEE---eCCHHHHHHH
Q 015424 234 RSAGVKCPLLCKEFIVDAW------QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE---VHDEREMDRV 304 (407)
Q Consensus 234 r~a~v~lPVL~KDFIid~~------QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVE---Vht~eElerA 304 (407)
|+..+++||+..-+--+-+ -+..+.++|+|++++ -.|+.++..++.+.+++.|++.+.= ..+.+.++.+
T Consensus 90 r~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii--~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i 167 (267)
T 3vnd_A 90 RAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLI--ADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMV 167 (267)
T ss_dssp HHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEE--TTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHH
T ss_pred HhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEe--CCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHH
Confidence 8643689987543322111 256688999999877 3566678889999999999986422 2356778877
Q ss_pred hcccCCcEEEeeccccccccccccccc--cccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEE
Q 015424 305 LGIEGIELIGINNRNLAISIFSYRTET--FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVL 382 (407)
Q Consensus 305 l~l~Ga~iIGINnRdL~~~~~~~t~~T--f~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVL 382 (407)
.+. +..+|.+-.+ .|+|... +..++ .++++.++. . .+++++..+||+|+++++.....|||+|+
T Consensus 168 ~~~-~~gfvY~vS~------~GvTG~~~~~~~~~---~~~v~~vr~--~--~~~pv~vGfGI~~~e~~~~~~~~gADgvV 233 (267)
T 3vnd_A 168 SEQ-GEGYTYLLSR------AGVTGTESKAGEPI---ENILTQLAE--F--NAPPPLLGFGIAEPEQVRAAIKAGAAGAI 233 (267)
T ss_dssp HHH-CCSCEEESCC------CCCC--------CH---HHHHHHHHT--T--TCCCEEECSSCCSHHHHHHHHHTTCSEEE
T ss_pred HHh-CCCcEEEEec------CCCCCCccCCcHHH---HHHHHHHHH--h--cCCCEEEECCcCCHHHHHHHHHcCCCEEE
Confidence 775 4445554221 2222222 33332 223332221 1 35789999999999999988999999999
Q ss_pred EcccccC
Q 015424 383 VGESIVK 389 (407)
Q Consensus 383 VGeaLmk 389 (407)
||++|++
T Consensus 234 VGSaiv~ 240 (267)
T 3vnd_A 234 SGSAVVK 240 (267)
T ss_dssp ECHHHHH
T ss_pred ECHHHHH
Confidence 9999997
No 60
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=99.09 E-value=1.1e-09 Score=106.17 Aligned_cols=195 Identities=17% Similarity=0.217 Sum_probs=121.3
Q ss_pred CCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEE---ecCCc----CC--------------CCHHHHHHH
Q 015424 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSIL---TDEKY----FK--------------GSFENLEAV 233 (407)
Q Consensus 175 ~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVL---Td~~~----F~--------------Gs~edL~~V 233 (407)
++.++|.=+=---|+. ..-.+++++++++||+.|.+- +||-+ .+ .-++.++.+
T Consensus 18 ~~~ali~yi~aGdP~~------~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~ 91 (271)
T 3nav_A 18 QQGAFVPFVTIGDPNP------EQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQI 91 (271)
T ss_dssp TBCEEEEEEETTSSCH------HHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCH------HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4456776552222221 135677888889999998885 22211 11 124567777
Q ss_pred HhcCCCCcEEeccccC-----CHH-HHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEE--EEe-CCHHHHHHH
Q 015424 234 RSAGVKCPLLCKEFIV-----DAW-QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTAL--VEV-HDEREMDRV 304 (407)
Q Consensus 234 r~a~v~lPVL~KDFIi-----d~~-QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aL--VEV-ht~eElerA 304 (407)
|+..+++||+...+-- ... -+..+.++|+|++++ --|+.++..++.+.+++.|++.+ +-- .+.+.+.++
T Consensus 92 r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIi--pDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i 169 (271)
T 3nav_A 92 RARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLI--ADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAV 169 (271)
T ss_dssp HHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEE--TTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHH
T ss_pred HhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEE--CCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHH
Confidence 7643689987543221 111 356688999999877 35677788899999999999853 222 346777777
Q ss_pred hcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEc
Q 015424 305 LGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVG 384 (407)
Q Consensus 305 l~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVG 384 (407)
.+. +..+|..-.+ .|+|...-..+. ...++++.++. . .+.+++..+||+|+++++.....|||||+||
T Consensus 170 ~~~-~~gfiY~vs~------~GvTG~~~~~~~-~~~~~v~~vr~--~--~~~Pv~vGfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 170 AQL-GKGYTYLLSR------AGVTGAETKANM-PVHALLERLQQ--F--DAPPALLGFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp HHH-CCSCEEECCC------C--------CCH-HHHHHHHHHHH--T--TCCCEEECSSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHH-CCCeEEEEec------cCCCCcccCCch-hHHHHHHHHHH--h--cCCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 775 5555554221 233333222221 12333333221 1 3578999999999999998889999999999
Q ss_pred ccccC
Q 015424 385 ESIVK 389 (407)
Q Consensus 385 eaLmk 389 (407)
++|++
T Consensus 238 SAiv~ 242 (271)
T 3nav_A 238 SAVVK 242 (271)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99997
No 61
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.07 E-value=3.1e-09 Score=104.14 Aligned_cols=170 Identities=13% Similarity=0.103 Sum_probs=117.4
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHH----HHHHHhcCCCCcEEeccccC-----C--HHHHHHHHHcCCCEEEEe
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCKEFIV-----D--AWQIYYARTKGADAVLLI 268 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~ed----L~~Vr~a~v~lPVL~KDFIi-----d--~~QI~eAr~~GADaVLLi 268 (407)
.++|.+..++|+ +.++.... ..+.+. ++.+|+. ++.|+-..=|+. + ..++..+..+|+|.|.+.
T Consensus 29 ~~la~av~~aGg--lG~i~~~~--~~s~~~l~~~i~~i~~~-~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~ 103 (328)
T 2gjl_A 29 AEMAAAVANAGG--LATLSALT--QPSPEALAAEIARCREL-TDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETA 103 (328)
T ss_dssp HHHHHHHHHTTS--BCEEETTT--SSSHHHHHHHHHHHHHH-CSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHCCC--eEEeCCCC--CCCHHHHHHHHHHHHHh-cCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEc
Confidence 357777777774 33442221 113544 4556664 566765433332 1 256777889999999987
Q ss_pred ccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccc
Q 015424 269 AAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERG 348 (407)
Q Consensus 269 aaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~ 348 (407)
... + .++++.+++.|+.+++.|++.+++.++.+. |++.|.+.++.. .+++...-..+++...++.+.
T Consensus 104 ~g~-p----~~~~~~l~~~gi~vi~~v~t~~~a~~~~~~-GaD~i~v~g~~~----GG~~G~~~~~~~~~l~~v~~~--- 170 (328)
T 2gjl_A 104 GND-P----GEHIAEFRRHGVKVIHKCTAVRHALKAERL-GVDAVSIDGFEC----AGHPGEDDIPGLVLLPAAANR--- 170 (328)
T ss_dssp ESC-C----HHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSEEEEECTTC----SBCCCSSCCCHHHHHHHHHTT---
T ss_pred CCC-c----HHHHHHHHHcCCCEEeeCCCHHHHHHHHHc-CCCEEEEECCCC----CcCCCCccccHHHHHHHHHHh---
Confidence 652 3 345677788899999999999999999996 999999976654 112111111233333343332
Q ss_pred cccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015424 349 EIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 349 ~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 392 (407)
.++++|+.|||.+++|+.++..+|+|+|.||++++..++
T Consensus 171 -----~~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~~e 209 (328)
T 2gjl_A 171 -----LRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRE 209 (328)
T ss_dssp -----CCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTSSS
T ss_pred -----cCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCcc
Confidence 257899999999999999999999999999999999887
No 62
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=99.07 E-value=2.4e-09 Score=100.92 Aligned_cols=174 Identities=17% Similarity=0.247 Sum_probs=125.6
Q ss_pred eEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHH
Q 015424 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (407)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eA 257 (407)
.||+=+.-.++. +..+++++..++|+.+|-+ |+.. ....+.++.+++...++-+-. +.+++..|+..|
T Consensus 18 ~ii~vir~~~~~--------~~~~~~~al~~gGv~~iel-~~k~--~~~~~~i~~l~~~~~~l~vga-Gtvl~~d~~~~A 85 (224)
T 1vhc_A 18 KIVPVIALDNAD--------DILPLADTLAKNGLSVAEI-TFRS--EAAADAIRLLRANRPDFLIAA-GTVLTAEQVVLA 85 (224)
T ss_dssp CEEEEECCSSGG--------GHHHHHHHHHHTTCCEEEE-ETTS--TTHHHHHHHHHHHCTTCEEEE-ESCCSHHHHHHH
T ss_pred CeEEEEeCCCHH--------HHHHHHHHHHHcCCCEEEE-eccC--chHHHHHHHHHHhCcCcEEee-CcEeeHHHHHHH
Confidence 366655444432 6778999999999998877 4432 234566666665422333333 446789999999
Q ss_pred HHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCch
Q 015424 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
.++|||.|++.. .+ ..+++.|+++|+..+.-|+|.+|+.+|.++ |+++|++ + + .... ..++
T Consensus 86 ~~aGAd~v~~p~---~d---~~v~~~ar~~g~~~i~Gv~t~~e~~~A~~~-Gad~vk~----F-----p--a~~~-gG~~ 146 (224)
T 1vhc_A 86 KSSGADFVVTPG---LN---PKIVKLCQDLNFPITPGVNNPMAIEIALEM-GISAVKF----F-----P--AEAS-GGVK 146 (224)
T ss_dssp HHHTCSEEECSS---CC---HHHHHHHHHTTCCEECEECSHHHHHHHHHT-TCCEEEE----T-----T--TTTT-THHH
T ss_pred HHCCCCEEEECC---CC---HHHHHHHHHhCCCEEeccCCHHHHHHHHHC-CCCEEEE----e-----e--Cccc-cCHH
Confidence 999999997653 12 346678899999999999999999999997 9999999 2 1 0111 0133
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHc-CCCEEEEcccccCCC
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA-GVKAVLVGESIVKQD 391 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~-GadaVLVGeaLmk~~ 391 (407)
....+... + +++++++-||| +++++..+.++ |+++|. |++|++++
T Consensus 147 ~lk~l~~~-----~--~~ipvvaiGGI-~~~N~~~~l~agga~~v~-gS~i~~~~ 192 (224)
T 1vhc_A 147 MIKALLGP-----Y--AQLQIMPTGGI-GLHNIRDYLAIPNIVACG-GSWFVEKK 192 (224)
T ss_dssp HHHHHHTT-----T--TTCEEEEBSSC-CTTTHHHHHTSTTBCCEE-ECGGGCHH
T ss_pred HHHHHHhh-----C--CCCeEEEECCc-CHHHHHHHHhcCCCEEEE-EchhcCcc
Confidence 34444432 1 26899999999 78999999999 999999 99999854
No 63
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=99.07 E-value=1.2e-10 Score=108.20 Aligned_cols=184 Identities=17% Similarity=0.136 Sum_probs=126.4
Q ss_pred HHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE--eccccCCHHHHHHHHHcCCCEEEEeccCCCHHH
Q 015424 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD 276 (407)
Q Consensus 199 p~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~ 276 (407)
..++++.. .+|++.+-+-+ +.++...++.++.+|+...+.||+ .|=.-.+.+.+.++..+|||.|.+-... ..+.
T Consensus 21 ~~~~~~~~-~~~vd~ie~g~-~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~-~~~~ 97 (218)
T 3jr2_A 21 AVAVASNV-ASYVDVIEVGT-ILAFAEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAA-HIAT 97 (218)
T ss_dssp HHHHHHHH-GGGCSEEEECH-HHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTS-CHHH
T ss_pred HHHHHHHh-cCCceEEEeCc-HHHHhcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCC-CHHH
Confidence 34555554 56788887643 223334578899998752356665 2322234566778899999999886543 3445
Q ss_pred HHHHHHHHHHcCCcEEEE---eCCHHHHHHHhcccCCcEEEeeccccccccccccccc--cccCchhHHHHhhccccccc
Q 015424 277 IRYMTKICKLLGLTALVE---VHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTET--FEVDNSNTKKLLEGERGEII 351 (407)
Q Consensus 277 L~~Li~~a~~LGL~aLVE---Vht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~T--f~vDl~~t~~L~~~~~~~~i 351 (407)
++++++.+++.|+.+.++ +.|.+++..+.+. |++++++.. +++... .....+...++.+. .
T Consensus 98 ~~~~~~~~~~~g~~~~~d~l~~~T~~~~~~~~~~-g~d~v~~~~--------~~~~~~~g~~~~~~~l~~i~~~-~---- 163 (218)
T 3jr2_A 98 IAACKKVADELNGEIQIEIYGNWTMQDAKAWVDL-GITQAIYHR--------SRDAELAGIGWTTDDLDKMRQL-S---- 163 (218)
T ss_dssp HHHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHT-TCCEEEEEC--------CHHHHHHTCCSCHHHHHHHHHH-H----
T ss_pred HHHHHHHHHHhCCccceeeeecCCHHHHHHHHHc-Cccceeeee--------ccccccCCCcCCHHHHHHHHHH-h----
Confidence 788999999999998664 4688899999887 999888721 111111 01122223333322 1
Q ss_pred ccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 352 RQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 352 ~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
..++++++.||| +++++..+.++|||+++||++|++++||.+++ +|..
T Consensus 164 -~~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~ 211 (218)
T 3jr2_A 164 -ALGIELSITGGI-VPEDIYLFEGIKTKTFIAGRALAGAEGQQTAA-ALRE 211 (218)
T ss_dssp -HTTCEEEEESSC-CGGGGGGGTTSCEEEEEESGGGSHHHHHHHHH-HHHH
T ss_pred -CCCCCEEEECCC-CHHHHHHHHHcCCCEEEEchhhcCCCCHHHHH-HHHH
Confidence 135789999999 69999999999999999999999999999988 7753
No 64
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.07 E-value=5.6e-10 Score=107.79 Aligned_cols=187 Identities=21% Similarity=0.191 Sum_probs=124.5
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecCCcC---CCCHHHHHHHHhcCCCCcEEecc-ccCCHH-HH---HHHHH--cCCCEE
Q 015424 196 DFDPVEIARSYEKGGAACLSILTDEKYF---KGSFENLEAVRSAGVKCPLLCKE-FIVDAW-QI---YYART--KGADAV 265 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLTd~~~F---~Gs~edL~~Vr~a~v~lPVL~KD-FIid~~-QI---~eAr~--~GADaV 265 (407)
.-++..+.++.+..|+.-+-|-.-..-. .+....+..+++ ..+.+|-.- +-.+.. -| ..||+ .|-|-|
T Consensus 29 y~~~~~~~~a~~asg~e~vtva~rR~~~~~~~~~~~~~~~i~~--~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~i 106 (265)
T 1wv2_A 29 YKDLDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDVIPP--DRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLV 106 (265)
T ss_dssp SSSHHHHHHHHHHSCCSEEEEEGGGCCC-------------CT--TTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEE
T ss_pred CCCHHHHHHHHHHhCCCeEEEEEEeeccccCCCcchHHhhhhh--cCCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeE
Confidence 3478889999999999988886543322 123334444543 356666211 111111 11 22555 477777
Q ss_pred EEecc----CCCHHHHHHHHHHHHHc---CCcEE-EEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCch
Q 015424 266 LLIAA----VLPDLDIRYMTKICKLL---GLTAL-VEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 266 LLiaa----iL~~~~L~~Li~~a~~L---GL~aL-VEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
=|=.- .|- .|..+.++.++.| |+.++ +.+.|.....+..++ |+++|-.-.. +||++.+.+ |++
T Consensus 107 KlEv~~d~~~ll-pD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~-G~~aVmPlg~-pIGsG~Gi~------~~~ 177 (265)
T 1wv2_A 107 KLEVLADQKTLF-PNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEI-GCIAVMPLAG-LIGSGLGIC------NPY 177 (265)
T ss_dssp EECCBSCTTTCC-BCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHS-CCSEEEECSS-STTCCCCCS------CHH
T ss_pred EEEeecCccccC-cCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHh-CCCEEEeCCc-cCCCCCCcC------CHH
Confidence 66322 111 3567788889988 99999 799999999999998 9999844232 345444332 444
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 401 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 401 (407)
....+.+. .+++||++|||.||+|+..++++|||||+||++|+++.||....+.+.
T Consensus 178 lI~~I~e~--------~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~ 233 (265)
T 1wv2_A 178 NLRIILEE--------AKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMK 233 (265)
T ss_dssp HHHHHHHH--------CSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHTSSSHHHHHHHHH
T ss_pred HHHHHHhc--------CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHH
Confidence 55555543 367899999999999999999999999999999999999987776664
No 65
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.06 E-value=5.5e-09 Score=102.97 Aligned_cols=176 Identities=15% Similarity=0.103 Sum_probs=122.2
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHH----HHHHHhcCCCCcEEeccccCC---HHHHHHHHHcCCCEEEEeccCC
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCKEFIVD---AWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~ed----L~~Vr~a~v~lPVL~KDFIid---~~QI~eAr~~GADaVLLiaaiL 272 (407)
.++|.+..++|+ +.++.- .+ -+.+. ++.+|+. ++.|+-..=|+.+ ...+..+...|+|.|.+....
T Consensus 40 ~~la~av~~aGg--lG~i~~-~~--~~~~~l~~~i~~i~~~-~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~- 112 (326)
T 3bo9_A 40 PTLAAAVSEAGG--LGIIGS-GA--MKPDDLRKAISELRQK-TDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN- 112 (326)
T ss_dssp HHHHHHHHHTTS--BEEEEC-TT--CCHHHHHHHHHHHHTT-CSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC-
T ss_pred HHHHHHHHhCCC--cEEeCC-CC--CCHHHHHHHHHHHHHh-cCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC-
Confidence 357777777774 333321 11 14544 4455654 5678765544423 345666789999999986653
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccc
Q 015424 273 PDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIR 352 (407)
Q Consensus 273 ~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~ 352 (407)
+ .++++.+++.|+.+++.|++.+++.++.+. |++.|.+.+++. .+++.. ..+++...++.+.
T Consensus 113 p----~~~~~~l~~~g~~v~~~v~s~~~a~~a~~~-GaD~i~v~g~~~----GG~~G~--~~~~~ll~~i~~~------- 174 (326)
T 3bo9_A 113 P----TKYIRELKENGTKVIPVVASDSLARMVERA-GADAVIAEGMES----GGHIGE--VTTFVLVNKVSRS------- 174 (326)
T ss_dssp C----HHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSCEEEECTTS----SEECCS--SCHHHHHHHHHHH-------
T ss_pred c----HHHHHHHHHcCCcEEEEcCCHHHHHHHHHc-CCCEEEEECCCC----CccCCC--ccHHHHHHHHHHH-------
Confidence 3 345677788899999999999999999997 999999988765 112111 1234444444332
Q ss_pred cCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCCh--HHHHHhhh
Q 015424 353 QKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDP--GKGITGLF 401 (407)
Q Consensus 353 ~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp--~~~i~~L~ 401 (407)
.++++|+.|||.+++|+.++..+|+++|.||++++..++. ...+++.+
T Consensus 175 -~~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~e~~~~~~~k~~~ 224 (326)
T 3bo9_A 175 -VNIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVESDVHPVYKEKI 224 (326)
T ss_dssp -CSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTBSSCCSCHHHHHHH
T ss_pred -cCCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcCccccccHHHHHHH
Confidence 2578999999999999999999999999999999988763 34444443
No 66
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.06 E-value=1.6e-09 Score=110.43 Aligned_cols=133 Identities=17% Similarity=0.188 Sum_probs=95.2
Q ss_pred HHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHH-cCCcEEE-EeCCHHHHHHHhcccCCcEEEeecccccccccccc
Q 015424 251 AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKL-LGLTALV-EVHDEREMDRVLGIEGIELIGINNRNLAISIFSYR 328 (407)
Q Consensus 251 ~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~-LGL~aLV-EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t 328 (407)
..++..+.++|+|.|.++++.-.+..+.++++.+++ +|+.+++ .|+|.++++.+.++ |++.|.+.+- .+++. .+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~a-GAD~I~vG~g--~Gs~~-~t 221 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIEN-GADGIKVGIG--PGSIC-TT 221 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHT-TCSEEEECC-----------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHc-CCCEEEEeCC--CCcCc-cc
Confidence 456777889999999997776545556667766665 5999997 99999999999997 9999988321 01110 11
Q ss_pred c--ccc-ccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015424 329 T--ETF-EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 329 ~--~Tf-~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 392 (407)
. ... .+++....++.+.. ...++++|+.|||.+++|+.++..+||++|.||++|+..+.
T Consensus 222 r~~~g~g~p~~~al~~v~~~~-----~~~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~t~E 283 (400)
T 3ffs_A 222 RIVAGVGVPQITAIEKCSSVA-----SKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEE 283 (400)
T ss_dssp -CCSCBCCCHHHHHHHHHHHH-----TTTTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTBTT
T ss_pred ccccccchhHHHHHHHHHHHH-----HhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhcCCC
Confidence 1 111 13344444444321 12368999999999999999999999999999999998654
No 67
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=99.06 E-value=1.1e-09 Score=103.35 Aligned_cols=174 Identities=13% Similarity=0.139 Sum_probs=125.4
Q ss_pred eEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHH
Q 015424 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (407)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eA 257 (407)
.||+=+...++. +..+++++..++|+.+|-+ |+.. ....+-++.+++...++-+-. +.+++..++..|
T Consensus 27 ~ii~V~r~~~~~--------~~~~~~~al~~gGv~~iel-~~k~--~~~~~~i~~l~~~~~~~~iga-gtvl~~d~~~~A 94 (225)
T 1mxs_A 27 RILPVITIAREE--------DILPLADALAAGGIRTLEV-TLRS--QHGLKAIQVLREQRPELCVGA-GTVLDRSMFAAV 94 (225)
T ss_dssp SEEEEECCSCGG--------GHHHHHHHHHHTTCCEEEE-ESSS--THHHHHHHHHHHHCTTSEEEE-ECCCSHHHHHHH
T ss_pred CEEEEEeCCCHH--------HHHHHHHHHHHCCCCEEEE-ecCC--ccHHHHHHHHHHhCcccEEee-CeEeeHHHHHHH
Confidence 366655554442 6788999999999998877 4432 123455665655422443334 346889999999
Q ss_pred HHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCch
Q 015424 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
..+|||.|++.. .+ ..+.+.++.+|+..+..|||.+|+.+|.++ |+++|++ + + .... ..++
T Consensus 95 ~~aGAd~v~~p~--~d----~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~-Gad~vk~----F-----P--a~~~-~G~~ 155 (225)
T 1mxs_A 95 EAAGAQFVVTPG--IT----EDILEAGVDSEIPLLPGISTPSEIMMGYAL-GYRRFKL----F-----P--AEIS-GGVA 155 (225)
T ss_dssp HHHTCSSEECSS--CC----HHHHHHHHHCSSCEECEECSHHHHHHHHTT-TCCEEEE----T-----T--HHHH-THHH
T ss_pred HHCCCCEEEeCC--CC----HHHHHHHHHhCCCEEEeeCCHHHHHHHHHC-CCCEEEE----c-----c--Cccc-cCHH
Confidence 999999998753 22 346788899999999999999999999997 9999999 2 1 0111 0123
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHH-cCCCEEEEcccccCCC
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQE-AGVKAVLVGESIVKQD 391 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~-~GadaVLVGeaLmk~~ 391 (407)
....+... + +++++++-||| +++++..+.+ .|+++|. |++|++.+
T Consensus 156 ~lk~i~~~-----~--~~ipvvaiGGI-~~~N~~~~l~~~Ga~~v~-gSai~~~~ 201 (225)
T 1mxs_A 156 AIKAFGGP-----F--GDIRFCPTGGV-NPANVRNYMALPNVMCVG-TTWMLDSS 201 (225)
T ss_dssp HHHHHHTT-----T--TTCEEEEBSSC-CTTTHHHHHHSTTBCCEE-ECTTSCHH
T ss_pred HHHHHHhh-----C--CCCeEEEECCC-CHHHHHHHHhccCCEEEE-EchhcCch
Confidence 33444332 1 26899999999 8899999999 6999999 99999854
No 68
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=99.05 E-value=3.5e-09 Score=101.45 Aligned_cols=205 Identities=19% Similarity=0.154 Sum_probs=122.9
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEe---cCCcCCC-------------------CHHHHHHH
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT---DEKYFKG-------------------SFENLEAV 233 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLT---d~~~F~G-------------------s~edL~~V 233 (407)
+..+|.=+=.-.|+. ....++++.+.++||++|=+-+ ||-+ .| -++.++.+
T Consensus 16 ~~~~i~~i~~g~p~~------~~~~~~~~~l~~~G~D~IElG~P~sdP~a-dgp~i~~a~~~al~~G~~~~~~~~~v~~i 88 (262)
T 2ekc_A 16 EKALVSYLMVGYPDY------ETSLKAFKEVLKNGTDILEIGFPFSDPVA-DGPTIQVAHEVALKNGIRFEDVLELSETL 88 (262)
T ss_dssp BCEEEEEEETTSSCH------HHHHHHHHHHHHTTCSEEEEECCCSCCTT-SCHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CceEEEEecCCCCCh------HHHHHHHHHHHHcCCCEEEECCCCCCccc-ccHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 345666553333432 1457789999999999998843 1110 11 13557888
Q ss_pred HhcCC-CCcEEeccccC--C----HHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcE--EEEe-CCHHHHHH
Q 015424 234 RSAGV-KCPLLCKEFIV--D----AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTA--LVEV-HDEREMDR 303 (407)
Q Consensus 234 r~a~v-~lPVL~KDFIi--d----~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~a--LVEV-ht~eEler 303 (407)
|+. + ++|++.-.+.- . ..-+..+.++|+|++++. .++.++..++.+.++++|++. ++.- ++.+.+..
T Consensus 89 r~~-~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~--dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ 165 (262)
T 2ekc_A 89 RKE-FPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVP--DLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKL 165 (262)
T ss_dssp HHH-CTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECT--TCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHH
T ss_pred Hhh-cCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEEC--CCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHH
Confidence 876 7 89988632111 1 123455889999998773 566678999999999999875 3333 45566655
Q ss_pred HhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEE
Q 015424 304 VLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLV 383 (407)
Q Consensus 304 Al~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLV 383 (407)
.... ...++-.- +..++|...-........++++.++. . .++++...+||+|++++.. ...|||+|+|
T Consensus 166 ia~~-a~gfiy~v------s~~g~TG~~~~~~~~~~~~~v~~vr~--~--~~~pv~vG~GI~t~e~~~~-~~~gADgvIV 233 (262)
T 2ekc_A 166 ICEA-ADEMTYFV------SVTGTTGAREKLPYERIKKKVEEYRE--L--CDKPVVVGFGVSKKEHARE-IGSFADGVVV 233 (262)
T ss_dssp HHHH-CSSCEEEE------SSCC---------CHHHHHHHHHHHH--H--CCSCEEEESSCCSHHHHHH-HHTTSSEEEE
T ss_pred HHHh-CCCCEEEE------ecCCccCCCCCcCcccHHHHHHHHHh--h--cCCCEEEeCCCCCHHHHHH-HHcCCCEEEE
Confidence 5554 22232111 11222222211110111222222221 1 2567889999999999999 5688999999
Q ss_pred cccccCC--CChHHHHHhhhc
Q 015424 384 GESIVKQ--DDPGKGITGLFG 402 (407)
Q Consensus 384 GeaLmk~--~dp~~~i~~L~~ 402 (407)
|++|++. .++.+.+++|+.
T Consensus 234 GSai~~~~~~~~~~~~~~~~~ 254 (262)
T 2ekc_A 234 GSALVKLAGQKKIEDLGNLVK 254 (262)
T ss_dssp CHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHhhhhhhhHHHHHHHHH
Confidence 9999987 556666776653
No 69
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=99.02 E-value=4.6e-09 Score=99.36 Aligned_cols=198 Identities=14% Similarity=0.119 Sum_probs=138.8
Q ss_pred CCCcCCCCCCC-CHHHHHHHHHHcCCcEEEEEe-cCCc---CCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHc
Q 015424 187 SPSRGILREDF-DPVEIARSYEKGGAACLSILT-DEKY---FKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTK 260 (407)
Q Consensus 187 SPSkG~i~~~~-dp~~iA~ay~~~GA~aISVLT-d~~~---F~Gs~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~ 260 (407)
||| .+..|+ +..+-.+..+++||+.+++-. |..| +.=++.-++.+|+. + +.|+.+.=.|.||....+....
T Consensus 9 ~pS--ila~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~-~p~~~~dvhLmv~dp~~~i~~~~~ 85 (227)
T 1tqx_A 9 APS--VLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKY-TKSIFFDVHLMVEYPEKYVPLLKT 85 (227)
T ss_dssp EEB--GGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGG-CSSCEEEEEEESSCGGGGGGGCTT
T ss_pred Eee--hhcCChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHh-CCCCcEEEEEEEcCHHHHHHHHHh
Confidence 677 455555 677777888899999988754 3222 23347889999986 6 7898876667777654444334
Q ss_pred CCCEEEEeccCCCHHHHHHHHH---HHHHcCCcEEEEeC--C-HHHHHHHhcccCCcEEEeeccccccccccccccccc-
Q 015424 261 GADAVLLIAAVLPDLDIRYMTK---ICKLLGLTALVEVH--D-EREMDRVLGIEGIELIGINNRNLAISIFSYRTETFE- 333 (407)
Q Consensus 261 GADaVLLiaaiL~~~~L~~Li~---~a~~LGL~aLVEVh--t-~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~- 333 (407)
||.+..-...-. +.+.+.++ .++++|+.+-+.++ | .+.++..+.+..+++|-+-..+. |++ ...|.
T Consensus 86 -Ad~itvH~ea~~-~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~p---Gf~--gq~f~~ 158 (227)
T 1tqx_A 86 -SNQLTFHFEALN-EDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEP---GFG--GQSFMH 158 (227)
T ss_dssp -SSEEEEEGGGGT-TCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCT---TCS--SCCCCG
T ss_pred -CCEEEEeecCCc-cCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeecc---CCC--Ccccch
Confidence 999987766532 24677888 89999999999883 3 34556666641389995543333 332 34443
Q ss_pred cCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 334 VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 334 vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
..++...+|.+. + .++.+.+-||| +++.+..+.++|||.+++|++|++++||.+.+++|..
T Consensus 159 ~~l~ki~~lr~~-----~--~~~~I~VdGGI-~~~ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~ 219 (227)
T 1tqx_A 159 DMMGKVSFLRKK-----Y--KNLNIQVDGGL-NIETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRV 219 (227)
T ss_dssp GGHHHHHHHHHH-----C--TTCEEEEESSC-CHHHHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----c--cCCeEEEECCC-CHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHH
Confidence 233444455443 1 26788889999 6999999999999999999999999999999988753
No 70
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=99.02 E-value=1.8e-09 Score=102.79 Aligned_cols=196 Identities=9% Similarity=0.024 Sum_probs=132.6
Q ss_pred cCCCcCCCCCCC-CHHHHHHHHHHcCCcEEEEEe-cCCcCC---CCHHHHHHHHhcCC--CCcEEeccccCCHH-HHHHH
Q 015424 186 ASPSRGILREDF-DPVEIARSYEKGGAACLSILT-DEKYFK---GSFENLEAVRSAGV--KCPLLCKEFIVDAW-QIYYA 257 (407)
Q Consensus 186 aSPSkG~i~~~~-dp~~iA~ay~~~GA~aISVLT-d~~~F~---Gs~edL~~Vr~a~v--~lPVL~KDFIid~~-QI~eA 257 (407)
-||| .+..++ +..+..+..+++||+.+++-. |..|.. =++.-++.+|+. + ++.++ +-+|. -+..+
T Consensus 16 i~ps--ila~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G~~~v~~lr~~-~~~DvhLM----v~~p~~~i~~~ 88 (237)
T 3cu2_A 16 LSVG--ILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFPTH-CFKDVHLM----VRNQLEVAKAV 88 (237)
T ss_dssp EEEE--GGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCTHHHHTSCTT-SEEEEEEE----CSCHHHHHHHH
T ss_pred EEEe--eeeCCcccHHHHHHHHHHcCCCEEEEEEecCccccchhhhHHHHHHHhhh-CCCCeEEE----EECHHHHHHHH
Confidence 4676 455555 677778888999999988754 333221 134666666654 3 22222 34564 46668
Q ss_pred HHcCCCEEEEeccCCCHHHHHHHHHHHHHc---------CCcEEEEe--CCHHHHHHHhcccCCcEEEeecccccccccc
Q 015424 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLL---------GLTALVEV--HDEREMDRVLGIEGIELIGINNRNLAISIFS 326 (407)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~L---------GL~aLVEV--ht~eElerAl~l~Ga~iIGINnRdL~~~~~~ 326 (407)
..+|||.|.+-...- .++.++++.++++ |+.+-+.+ +|..|....+. +++++|.+=..+- |++
T Consensus 89 ~~aGAd~itvH~ea~--~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l-~~~D~vlvMsv~p---gfg 162 (237)
T 3cu2_A 89 VANGANLVTLQLEQY--HDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYL-DQIDVIQLLTLDP---RNG 162 (237)
T ss_dssp HHTTCSEEEEETTCT--TSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTT-TTCSEEEEESEET---TTT
T ss_pred HHcCCCEEEEecCCc--ccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHh-hcCceeeeeeecc---CcC
Confidence 999999987776554 3477899999999 99999998 56655544443 3789997744433 444
Q ss_pred ccccccc-cCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHH--cCCCEEEEcccccCCCChHHHHHhhh
Q 015424 327 YRTETFE-VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQE--AGVKAVLVGESIVKQDDPGKGITGLF 401 (407)
Q Consensus 327 ~t~~Tf~-vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~--~GadaVLVGeaLmk~~dp~~~i~~L~ 401 (407)
..+|. ..++...+|.+..... ..++.+.+-||| +++.+..+.+ +|+|.+++|++|+++ ||.+.+++|.
T Consensus 163 --gq~f~~~~l~ki~~lr~~~~~~---~~~~~I~vdGGI-~~~~~~~~~~~~aGad~~VvGSaIf~~-d~~~~~~~l~ 233 (237)
T 3cu2_A 163 --TKYPSELILDRVIQVEKRLGNR---RVEKLINIDGSM-TLELAKYFKQGTHQIDWLVSGSALFSG-ELKTNLKVWK 233 (237)
T ss_dssp --EECCHHHHHHHHHHHHHHHGGG---GGGCEEEEESSC-CHHHHHHHHHSSSCCCCEEECGGGGSS-CHHHHHHHHH
T ss_pred --CeecChhHHHHHHHHHHHHHhc---CCCceEEEECCc-CHHHHHHHHHhCCCCcEEEEeeHHhCC-CHHHHHHHHH
Confidence 34443 2234444444432100 114688899999 6999999999 999999999999999 9999998885
No 71
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=99.01 E-value=4.3e-09 Score=101.87 Aligned_cols=186 Identities=19% Similarity=0.220 Sum_probs=111.7
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcC-----------------------CCCHHHHHH
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYF-----------------------KGSFENLEA 232 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F-----------------------~Gs~edL~~ 232 (407)
+.++|.=+=.-.|+.. ...++++.++++ |++|=+-+ .|- .+-++.++.
T Consensus 15 ~~~li~~i~~GdP~~~------~~~~~~~~l~~~-aD~IElG~--PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ 85 (271)
T 1ujp_A 15 RAALIPYLTAGFPSRE------GFLQAVEEVLPY-ADLLEIGL--PYSDPLGDGPVIQRASELALRKGMSVQGALELVRE 85 (271)
T ss_dssp BCEEEEEEETTSSCHH------HHHHHHHHHGGG-CSSEEEEC--CCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CceEEEEecCCCCChH------HHHHHHHHHHhc-CCEEEECC--CCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4456665544444431 345566777777 77776632 111 112577999
Q ss_pred HHhcCCCCcEEeccccC-----C-HHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcE--EEE-eCCHHHHHH
Q 015424 233 VRSAGVKCPLLCKEFIV-----D-AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTA--LVE-VHDEREMDR 303 (407)
Q Consensus 233 Vr~a~v~lPVL~KDFIi-----d-~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~a--LVE-Vht~eEler 303 (407)
+|+. +++||+.-.+-- . ..-+..+.++|||++++. -++.++..++.+.+++.|++. |+- ..+.+.++.
T Consensus 86 ir~~-~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~--Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ 162 (271)
T 1ujp_A 86 VRAL-TEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILP--DLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIAT 162 (271)
T ss_dssp HHHH-CCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECT--TCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHH
T ss_pred HHhc-CCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEec--CCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHH
Confidence 9987 899988633211 1 123556888999987764 455577889999999999864 222 234565555
Q ss_pred Hhcc-cCCcEEEeeccccccccccccccccc--cCc-hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCC
Q 015424 304 VLGI-EGIELIGINNRNLAISIFSYRTETFE--VDN-SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVK 379 (407)
Q Consensus 304 Al~l-~Ga~iIGINnRdL~~~~~~~t~~Tf~--vDl-~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gad 379 (407)
.... .|+.++ .+..|+|..+-. .++ +...++.+. .++++++++||+|+++++++ .|||
T Consensus 163 ia~~~~gfiy~--------vs~~G~TG~~~~~~~~~~~~v~~vr~~--------~~~Pv~vGfGI~t~e~a~~~--~~AD 224 (271)
T 1ujp_A 163 VVRHATGFVYA--------VSVTGVTGMRERLPEEVKDLVRRIKAR--------TALPVAVGFGVSGKATAAQA--AVAD 224 (271)
T ss_dssp HHTTCCSCEEE--------ECC------------CCHHHHHHHHTT--------CCSCEEEESCCCSHHHHHHH--TTSS
T ss_pred HHHhCCCCEEE--------EecCcccCCCCCCCccHHHHHHHHHhh--------cCCCEEEEcCCCCHHHHHHh--cCCC
Confidence 5443 233222 122333433322 222 333333332 36789999999999999997 9999
Q ss_pred EEEEcccccCCC
Q 015424 380 AVLVGESIVKQD 391 (407)
Q Consensus 380 aVLVGeaLmk~~ 391 (407)
+|+||++|++..
T Consensus 225 gVIVGSAi~~~~ 236 (271)
T 1ujp_A 225 GVVVGSALVRAL 236 (271)
T ss_dssp EEEECHHHHHHH
T ss_pred EEEEChHHhccc
Confidence 999999999864
No 72
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.00 E-value=3.3e-10 Score=104.73 Aligned_cols=161 Identities=10% Similarity=0.050 Sum_probs=110.2
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHH-HHHHHhc--CCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHH
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFEN-LEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD 276 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~ed-L~~Vr~a--~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~ 276 (407)
.+.++...++|+++|.+- ++. -+.+. .+.+++. ...+|++..|. +..|..+|||.|.|....++...
T Consensus 16 ~~~~~~a~~~Gv~~v~lr-~k~---~~~~~~~~~i~~l~~~~~~~livnd~------~~~A~~~gadgvhl~~~~~~~~~ 85 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLR-KPE---TPAMYSERLLTLIPEKYHRRIVTHEH------FYLKEEFNLMGIHLNARNPSEPH 85 (210)
T ss_dssp HHHHHHHHHTTCCEEEEC-CSS---CCHHHHHHHHHHSCGGGGGGEEESSC------TTHHHHTTCSEEECCSSSCSCCT
T ss_pred HHHHHHHHHCCCCEEEEc-cCC---CCHHHHHHHHHHHHHHhCCeEEEeCC------HHHHHHcCCCEEEECcccccccc
Confidence 477888889999999764 332 23333 3344432 02456655443 35588899999999776653321
Q ss_pred HHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccc---cccCchhHHHHhhccccccccc
Q 015424 277 IRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTET---FEVDNSNTKKLLEGERGEIIRQ 353 (407)
Q Consensus 277 L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~T---f~vDl~~t~~L~~~~~~~~i~~ 353 (407)
..++-..+-|||.+|+.+|. + |+++|++. +.|++.++. -..+++....+.+. + .
T Consensus 86 ---------~~~~~ig~s~~t~~e~~~A~-~-GaDyv~~g------~vf~t~sk~~~~~~~g~~~l~~~~~~-----~-~ 142 (210)
T 3ceu_A 86 ---------DYAGHVSCSCHSVEEVKNRK-H-FYDYVFMS------PIYDSISKVNYYSTYTAEELREAQKA-----K-I 142 (210)
T ss_dssp ---------TCCSEEEEEECSHHHHHTTG-G-GSSEEEEC------CCC---------CCCCHHHHHHHHHT-----T-C
T ss_pred ---------ccCCEEEEecCCHHHHHHHh-h-CCCEEEEC------CcCCCCCCCCCCCCCCHHHHHHHHHh-----c-C
Confidence 13788889999999999987 6 99999983 233333221 12455555555432 0 0
Q ss_pred CCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChH
Q 015424 354 KNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPG 394 (407)
Q Consensus 354 ~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~ 394 (407)
.++++|+.|||+ ++++..+.++|++||-||++|++.+||.
T Consensus 143 ~~iPviaiGGI~-~~nv~~~~~~Ga~gVav~s~i~~~~d~~ 182 (210)
T 3ceu_A 143 IDSKVMALGGIN-EDNLLEIKDFGFGGAVVLGDLWNKFDAC 182 (210)
T ss_dssp SSTTEEEESSCC-TTTHHHHHHTTCSEEEESHHHHTTCCTT
T ss_pred CCCCEEEECCCC-HHHHHHHHHhCCCEEEEhHHhHcCCCHH
Confidence 257899999995 9999999999999999999999999985
No 73
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=98.94 E-value=6.3e-08 Score=96.55 Aligned_cols=129 Identities=17% Similarity=0.151 Sum_probs=94.8
Q ss_pred HHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeecccccccccccccc
Q 015424 251 AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTE 330 (407)
Q Consensus 251 ~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~ 330 (407)
..++..+...|+|.|.+.....+. ++++.+++.|+.+++.|+|.+++.++.+. |+|+|.+.++..-++ .+....
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~~----~~i~~~~~~g~~v~~~v~t~~~a~~a~~~-GaD~i~v~g~~~GGh-~g~~~~ 185 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPDR----EVIARLRRAGTLTLVTATTPEEARAVEAA-GADAVIAQGVEAGGH-QGTHRD 185 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCCH----HHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSEEEEECTTCSEE-CCCSSC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcH----HHHHHHHHCCCeEEEECCCHHHHHHHHHc-CCCEEEEeCCCcCCc-CCCccc
Confidence 446777889999999997655433 34566677899999999999999999997 999999977754111 111111
Q ss_pred cc-c----cC-chhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCCh
Q 015424 331 TF-E----VD-NSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDP 393 (407)
Q Consensus 331 Tf-~----vD-l~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp 393 (407)
+. . .+ ++...++.+. .++++|+.|||.+++++..+..+|+|+|.||++++..+++
T Consensus 186 ~~~~~~~~~~~~~~l~~i~~~--------~~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e~ 246 (369)
T 3bw2_A 186 SSEDDGAGIGLLSLLAQVREA--------VDIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATDES 246 (369)
T ss_dssp CGGGTTCCCCHHHHHHHHHHH--------CSSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSTTC
T ss_pred ccccccccccHHHHHHHHHHh--------cCceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccc
Confidence 11 0 12 2333333221 3678999999999999999999999999999999998876
No 74
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=98.93 E-value=2e-08 Score=94.74 Aligned_cols=174 Identities=16% Similarity=0.118 Sum_probs=133.5
Q ss_pred eEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHH
Q 015424 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (407)
Q Consensus 178 ~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eA 257 (407)
.||+=+.-.+|. +...+|+++.++|..+|-| |... .+.++.++.+++. ++-+++-=+-+++..|+..|
T Consensus 14 ~vi~Vir~~~~~--------~a~~~a~al~~gGi~~iEv-t~~t--~~a~~~I~~l~~~-~p~~~IGAGTVlt~~~a~~a 81 (217)
T 3lab_A 14 PLIPVIVIDDLV--------HAIPMAKALVAGGVHLLEV-TLRT--EAGLAAISAIKKA-VPEAIVGAGTVCTADDFQKA 81 (217)
T ss_dssp SEEEEECCSCGG--------GHHHHHHHHHHTTCCEEEE-ETTS--TTHHHHHHHHHHH-CTTSEEEEECCCSHHHHHHH
T ss_pred CEEEEEEcCCHH--------HHHHHHHHHHHcCCCEEEE-eCCC--ccHHHHHHHHHHH-CCCCeEeeccccCHHHHHHH
Confidence 467666555443 7889999999999999998 3221 3567899999886 55567766778999999999
Q ss_pred HHcCCCEEEEeccCCCHHHHHHHHHHHHHcCC------cEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccc
Q 015424 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGL------TALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTET 331 (407)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL------~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~T 331 (407)
..+||+-|+--. ++ .+++++|+++|+ ..+--|.|..|+.+|+++ |+++|.+-.-+.
T Consensus 82 i~AGA~fivsP~--~~----~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~~-Gad~vK~FPa~~----------- 143 (217)
T 3lab_A 82 IDAGAQFIVSPG--LT----PELIEKAKQVKLDGQWQGVFLPGVATASEVMIAAQA-GITQLKCFPASA----------- 143 (217)
T ss_dssp HHHTCSEEEESS--CC----HHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHHHHT-TCCEEEETTTTT-----------
T ss_pred HHcCCCEEEeCC--Cc----HHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHHHHc-CCCEEEECcccc-----------
Confidence 999999987633 33 357889999999 999999999999999998 999998743221
Q ss_pred cccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 332 FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 332 f~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
+ -.++..+.|..- + .++.+++.|||+ ++++....++|+.+++.|+.|+.+
T Consensus 144 ~-gG~~~lkal~~p-----~--p~i~~~ptGGI~-~~N~~~~l~aGa~~~vgGs~l~~~ 193 (217)
T 3lab_A 144 I-GGAKLLKAWSGP-----F--PDIQFCPTGGIS-KDNYKEYLGLPNVICAGGSWLTES 193 (217)
T ss_dssp T-THHHHHHHHHTT-----C--TTCEEEEBSSCC-TTTHHHHHHSTTBCCEEESGGGCH
T ss_pred c-cCHHHHHHHHhh-----h--cCceEEEeCCCC-HHHHHHHHHCCCEEEEEChhhcCh
Confidence 0 012334444332 2 368999999995 999999999999999888777754
No 75
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.92 E-value=5.7e-08 Score=93.33 Aligned_cols=174 Identities=19% Similarity=0.138 Sum_probs=123.1
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEec-----cc-cC-----CHHHHHHHHHcCCC
Q 015424 195 EDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCK-----EF-IV-----DAWQIYYARTKGAD 263 (407)
Q Consensus 195 ~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~K-----DF-Ii-----d~~QI~eAr~~GAD 263 (407)
...++..+++...++|++++-| ++..+...+ . .+.|++.| .| .- -.+++.+|...|||
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v---------~~~~v~~~~-~-~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~ 107 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVF---------QRGIAEKYY-D-GSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGAS 107 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEE---------CHHHHHHHC-C-SSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCS
T ss_pred chhhHHHHHHHHHhhCCCEEEE---------CHHHHHHhh-c-CCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCC
Confidence 3568999999999999988876 355566554 3 45664421 12 11 11468889999999
Q ss_pred EEEEec--cCCCH----HHHHHHHHHHHHcCCcEEEEeC----------CHHHHH----HHhcccCCcEEEeeccccccc
Q 015424 264 AVLLIA--AVLPD----LDIRYMTKICKLLGLTALVEVH----------DEREMD----RVLGIEGIELIGINNRNLAIS 323 (407)
Q Consensus 264 aVLLia--aiL~~----~~L~~Li~~a~~LGL~aLVEVh----------t~eEle----rAl~l~Ga~iIGINnRdL~~~ 323 (407)
+|-+-. .-.+. +++..+.+.|+.+|+.+++|++ +.+++. .+.++ ||++|++. +
T Consensus 108 ~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~-GAD~vkt~---~--- 180 (263)
T 1w8s_A 108 AVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALEL-GADAMKIK---Y--- 180 (263)
T ss_dssp EEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHH-TCSEEEEE---C---
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHc-CCCEEEEc---C---
Confidence 998754 22222 3455666777788999999985 344443 44565 99999995 1
Q ss_pred cccccccccccCchhHHHHhhcccccccccCCceEEEeeCCC--CHHHHHHHH----HcCCCEEEEcccccCCCChHHHH
Q 015424 324 IFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLF--TPDDIAYVQ----EAGVKAVLVGESIVKQDDPGKGI 397 (407)
Q Consensus 324 ~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~--t~eD~~~l~----~~GadaVLVGeaLmk~~dp~~~i 397 (407)
+ .+++...++.+. . ..+++++.|||+ +.+|+.... ++|++|+.+|.+|++.+||.+.+
T Consensus 181 ----~-----~~~e~~~~~~~~-----~--~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~dp~~~~ 244 (263)
T 1w8s_A 181 ----T-----GDPKTFSWAVKV-----A--GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRDALKFA 244 (263)
T ss_dssp ----C-----SSHHHHHHHHHH-----T--TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTSTTHHHHH
T ss_pred ----C-----CCHHHHHHHHHh-----C--CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCcCHHHHH
Confidence 1 245555555543 1 223799999999 888877666 89999999999999999999998
Q ss_pred Hhhhc
Q 015424 398 TGLFG 402 (407)
Q Consensus 398 ~~L~~ 402 (407)
+.|..
T Consensus 245 ~~l~~ 249 (263)
T 1w8s_A 245 RALAE 249 (263)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88864
No 76
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=98.91 E-value=3.4e-08 Score=97.21 Aligned_cols=168 Identities=16% Similarity=0.154 Sum_probs=115.8
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHH----HHHHHhcCCCCcEEeccccCC---HHHHHHHHHcCCCEEEEeccCC
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCKEFIVD---AWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~ed----L~~Vr~a~v~lPVL~KDFIid---~~QI~eAr~~GADaVLLiaaiL 272 (407)
.+++.+..++|+ +.++.-. + -+.+. ++.+|+. ++.|+-..=|+.+ ...+..+..+|+|+|.+... .
T Consensus 26 ~~la~av~~aG~--lG~i~~~-~--~~~~~~~~~i~~i~~~-~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g-~ 98 (332)
T 2z6i_A 26 GDLAGAVSKAGG--LGIIGGG-N--APKEVVKANIDKIKSL-TDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAG-N 98 (332)
T ss_dssp HHHHHHHHHHTS--BEEEECT-T--CCHHHHHHHHHHHHHH-CCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSS-C
T ss_pred HHHHHHHHhCCC--cEEeCCC-C--CCHHHHHHHHHHHHHh-cCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCC-C
Confidence 357777777776 3333211 1 14444 4455664 5677755444423 23577788999999998765 2
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccc
Q 015424 273 PDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIR 352 (407)
Q Consensus 273 ~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~ 352 (407)
+. ++++.+++.|+.+++.|++.+++..+.+. |++.|.+.++.- + +++.. ..+++...++.+.
T Consensus 99 p~----~~i~~l~~~g~~v~~~v~~~~~a~~~~~~-GaD~i~v~g~~~---G-G~~g~--~~~~~ll~~i~~~------- 160 (332)
T 2z6i_A 99 PS----KYMERFHEAGIIVIPVVPSVALAKRMEKI-GADAVIAEGMEA---G-GHIGK--LTTMTLVRQVATA------- 160 (332)
T ss_dssp GG----GTHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSCEEEECTTS---S-EECCS--SCHHHHHHHHHHH-------
T ss_pred hH----HHHHHHHHcCCeEEEEeCCHHHHHHHHHc-CCCEEEEECCCC---C-CCCCC--ccHHHHHHHHHHh-------
Confidence 22 34566677899999999999999999997 999999976543 1 11111 1233334444332
Q ss_pred cCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCCh
Q 015424 353 QKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDP 393 (407)
Q Consensus 353 ~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp 393 (407)
.++++|+.|||.+++++..+..+|+|+|.||++++..++.
T Consensus 161 -~~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~e~ 200 (332)
T 2z6i_A 161 -ISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKES 200 (332)
T ss_dssp -CSSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBTTC
T ss_pred -cCCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCccc
Confidence 2578999999999999999999999999999999998853
No 77
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.89 E-value=1.1e-08 Score=106.38 Aligned_cols=186 Identities=14% Similarity=0.178 Sum_probs=97.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCC--CHHHHHHHHhcCCCCcEEeccc------------cCCH-HHHHHH
Q 015424 193 LREDFDPVEIARSYEKGGAACLSILTDEKYFKG--SFENLEAVRSAGVKCPLLCKEF------------IVDA-WQIYYA 257 (407)
Q Consensus 193 i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~G--s~edL~~Vr~a~v~lPVL~KDF------------Iid~-~QI~eA 257 (407)
+.++.+..+..+.+.+.+...+-|+.+.+-+.| +..|+.... .-|.-+||- ..+. ..+...
T Consensus 162 v~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~----~~p~a~kd~~grl~v~aavG~~~~~~~~a~~l 237 (490)
T 4avf_A 162 AREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAK----TYPLASKDEQGRLRVGAAVGTGADTGERVAAL 237 (490)
T ss_dssp -------------------------------------------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhc----cCcchhhhccCcceeeeeeccccchHHHHHHH
Confidence 445667778888888889999999887777777 334444333 234444431 1233 456667
Q ss_pred HHcCCCEEEEeccCCCHHHHHHHHHHHHH-c-CCcEEEE-eCCHHHHHHHhcccCCcEEEeecccccccccccccc---c
Q 015424 258 RTKGADAVLLIAAVLPDLDIRYMTKICKL-L-GLTALVE-VHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTE---T 331 (407)
Q Consensus 258 r~~GADaVLLiaaiL~~~~L~~Li~~a~~-L-GL~aLVE-Vht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~---T 331 (407)
.++|+|.|.+.++.-....+.++++..++ + ++.+++- |.+.+++..+.++ |++.|.+.. +++...++. .
T Consensus 238 ~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~a-GaD~I~vg~----g~Gs~~~t~~~~g 312 (490)
T 4avf_A 238 VAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEA-GADAVKVGI----GPGSICTTRIVAG 312 (490)
T ss_dssp HHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHT-TCSEEEECS----SCSTTCHHHHHTC
T ss_pred hhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHc-CCCEEEECC----CCCcCCCccccCC
Confidence 88999999998886655555566666555 4 7777775 9999999999997 999998732 112211111 1
Q ss_pred c-ccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015424 332 F-EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 332 f-~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 392 (407)
+ .+++....++.+.. ...++++|+.|||.+++|+.++..+||++|.||++|+....
T Consensus 313 ~g~p~~~~l~~v~~~~-----~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vGs~~~~~~E 369 (490)
T 4avf_A 313 VGVPQISAIANVAAAL-----EGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEE 369 (490)
T ss_dssp BCCCHHHHHHHHHHHH-----TTTTCCEEEESCCCSHHHHHHHHHHTCSEEEECTTTTTBTT
T ss_pred CCccHHHHHHHHHHHh-----ccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeecHHHhcCCC
Confidence 1 23444445554432 12368999999999999999999999999999999987553
No 78
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.84 E-value=1.4e-08 Score=104.82 Aligned_cols=186 Identities=12% Similarity=0.142 Sum_probs=93.0
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccc----c----C---C--HHHHHHHHH
Q 015424 193 LREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEF----I----V---D--AWQIYYART 259 (407)
Q Consensus 193 i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDF----I----i---d--~~QI~eAr~ 259 (407)
+.++.+..+.++.+.+.+...+-|+++.+-+.|-...-..++.. .-|+.++|+ + + . ..++..+..
T Consensus 170 v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~--~~~~~~~D~~~~l~vga~ig~~~~~~~~a~~l~~ 247 (494)
T 1vrd_A 170 APPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVI--EHPNAARDEKGRLLVGAAVGTSPETMERVEKLVK 247 (494)
T ss_dssp ---------------------------------------CHHHH--TCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhh--ccccccccchhhhccccccCcCHhHHHHHHHHHH
Confidence 34566788888899999999999998888788855443334432 234444443 1 1 1 357778899
Q ss_pred cCCCEEEEeccCCCHHHHHHHHHHHHH-c-CCcEEE-EeCCHHHHHHHhcccCCcEEEeeccccccccccccc---ccc-
Q 015424 260 KGADAVLLIAAVLPDLDIRYMTKICKL-L-GLTALV-EVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRT---ETF- 332 (407)
Q Consensus 260 ~GADaVLLiaaiL~~~~L~~Li~~a~~-L-GL~aLV-EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~---~Tf- 332 (407)
+|+|+|.+....-......++++..++ + ++.+++ .+.+.+++..+.++ |++.|-+.+-. |..-+. ...
T Consensus 248 aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~-G~d~I~v~~~~----G~~~~~~~~~~~g 322 (494)
T 1vrd_A 248 AGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKA-GADAVKVGVGP----GSICTTRVVAGVG 322 (494)
T ss_dssp TTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHT-TCSEEEECSSC----STTCHHHHHHCCC
T ss_pred hCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHc-CCCEEEEcCCC----CccccccccCCCC
Confidence 999999996654322333444555444 4 677664 58999999999997 99999985421 100000 111
Q ss_pred ccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 333 EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 333 ~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
.+.......+.+.. ...++++|+.|||.+++|+.++..+|||+|.+|++++..
T Consensus 323 ~p~~~~l~~v~~~~-----~~~~ipvia~GGI~~~~di~kala~GAd~V~iGr~~l~~ 375 (494)
T 1vrd_A 323 VPQLTAVMECSEVA-----RKYDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFAGT 375 (494)
T ss_dssp CCHHHHHHHHHHHH-----HTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTB
T ss_pred ccHHHHHHHHHHHH-----hhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHhcC
Confidence 12222223333221 113689999999999999999999999999999999753
No 79
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.82 E-value=1.1e-07 Score=99.33 Aligned_cols=190 Identities=14% Similarity=0.130 Sum_probs=127.3
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCC--CHHHHHHHHhc-------CCCCcEEeccccC-CHH-HHHHHHHcC
Q 015424 193 LREDFDPVEIARSYEKGGAACLSILTDEKYFKG--SFENLEAVRSA-------GVKCPLLCKEFIV-DAW-QIYYARTKG 261 (407)
Q Consensus 193 i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~G--s~edL~~Vr~a-------~v~lPVL~KDFIi-d~~-QI~eAr~~G 261 (407)
+.++.++.+..+.+.+.+...+-|+.+.+.+.| +.+|+-..... ...++|-..-... +.. .+....++|
T Consensus 189 v~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaG 268 (511)
T 3usb_A 189 APVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKAS 268 (511)
T ss_dssp EETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTT
T ss_pred ECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhc
Confidence 345678999999999999999999988877777 56666655432 0122332222112 333 455567899
Q ss_pred CCEEEEeccCCCHHHHHHHHHHHHH-c-CCcEEE-EeCCHHHHHHHhcccCCcEEEeeccccccccccccccc---c-cc
Q 015424 262 ADAVLLIAAVLPDLDIRYMTKICKL-L-GLTALV-EVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTET---F-EV 334 (407)
Q Consensus 262 ADaVLLiaaiL~~~~L~~Li~~a~~-L-GL~aLV-EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~T---f-~v 334 (407)
+|.|.+..+--....+.++++..++ + ++.+++ .|.+.++++.+.++ |++.|-+.. +++...++.. . .+
T Consensus 269 vd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~a-Gad~i~vg~----g~gsi~~~~~~~g~g~p 343 (511)
T 3usb_A 269 VDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEA-GANVVKVGI----GPGSICTTRVVAGVGVP 343 (511)
T ss_dssp CSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHH-TCSEEEECS----SCSTTCCHHHHHCCCCC
T ss_pred cceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHh-CCCEEEECC----CCccccccccccCCCCC
Confidence 9999998775444455556666555 3 576766 99999999999997 999887621 1222111110 1 12
Q ss_pred CchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015424 335 DNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 335 Dl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 392 (407)
++....++.+.. ...++++|+.|||.+++|+.++..+||++|.||++|+....
T Consensus 344 ~~~~l~~v~~~~-----~~~~iPVIa~GGI~~~~di~kala~GA~~V~vGs~~~~~~e 396 (511)
T 3usb_A 344 QLTAVYDCATEA-----RKHGIPVIADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAE 396 (511)
T ss_dssp HHHHHHHHHHHH-----HTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTT
T ss_pred cHHHHHHHHHHH-----HhCCCcEEEeCCCCCHHHHHHHHHhCchhheecHHHhcCcc
Confidence 333333333321 11368999999999999999999999999999999976554
No 80
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=98.82 E-value=1e-07 Score=95.97 Aligned_cols=176 Identities=13% Similarity=0.108 Sum_probs=111.8
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHH----HHHHHhcCCCCcEEeccc--cCCHHHHHHHHHcCCCEEEEeccCCC
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCKEF--IVDAWQIYYARTKGADAVLLIAAVLP 273 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~ed----L~~Vr~a~v~lPVL~KDF--Iid~~QI~eAr~~GADaVLLiaaiL~ 273 (407)
.++|.++.+.|. |.++.- . -+.+. ++.+|+. ..++|-.-=. --+..++..+.++|+|.|.+.++--.
T Consensus 60 ~~lA~avA~aGG--lg~i~~--~--~s~e~~~~~i~~vk~~-~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~ 132 (366)
T 4fo4_A 60 ARLAIALAQEGG--IGFIHK--N--MSIEQQAAQVHQVKIS-GGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGH 132 (366)
T ss_dssp HHHHHHHHHTTC--EEEECS--S--SCHHHHHHHHHHHHTT-TSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTT
T ss_pred HHHHHHHHHcCC--ceEeec--C--CCHHHHHHHHHHHHhc-CceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 467766665443 555431 1 24444 4445543 2333322100 12356788889999999999776554
Q ss_pred HHHHHHHHHHHHHc--CCcEEE-EeCCHHHHHHHhcccCCcEEEeecccccccccccccccc----ccCchhHHHHhhcc
Q 015424 274 DLDIRYMTKICKLL--GLTALV-EVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETF----EVDNSNTKKLLEGE 346 (407)
Q Consensus 274 ~~~L~~Li~~a~~L--GL~aLV-EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf----~vDl~~t~~L~~~~ 346 (407)
+..+.+.++.+++. ++.+++ -|.|.++++.+.++ |++.|.+. +++|...++... .+++....++.+..
T Consensus 133 ~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~a-GAD~I~vG----~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~ 207 (366)
T 4fo4_A 133 SEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEA-GVSAVKVG----IGPGSICTTRIVTGVGVPQITAIADAAGVA 207 (366)
T ss_dssp SHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHH-TCSEEEEC----SSCSTTBCHHHHHCCCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHc-CCCEEEEe----cCCCCCCCcccccCcccchHHHHHHHHHHH
Confidence 44555566666654 777776 69999999999997 99999982 122322221111 12333333333221
Q ss_pred cccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015424 347 RGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 347 ~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 392 (407)
...++++|+.|||.++.|+.++..+||++|.||++|+..+.
T Consensus 208 -----~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t~E 248 (366)
T 4fo4_A 208 -----NEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEE 248 (366)
T ss_dssp -----GGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTT
T ss_pred -----hhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCC
Confidence 01368999999999999999999999999999999998654
No 81
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=98.79 E-value=3.3e-08 Score=99.76 Aligned_cols=131 Identities=13% Similarity=0.136 Sum_probs=92.7
Q ss_pred HHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHc--CCcEEE-EeCCHHHHHHHhcccCCcEEEeecccccccccccc
Q 015424 252 WQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLL--GLTALV-EVHDEREMDRVLGIEGIELIGINNRNLAISIFSYR 328 (407)
Q Consensus 252 ~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~L--GL~aLV-EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t 328 (407)
.++..+..+|+|+|.+.+..-.+..+.++++.+++. ++.+++ .+++.++++++.++ |++.|.+.. .++...+
T Consensus 156 ~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~-Gad~I~vg~----~~G~~~~ 230 (404)
T 1eep_A 156 ERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISV-GADCLKVGI----GPGSICT 230 (404)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTT-TCSEEEECS----SCSTTSH
T ss_pred HHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhc-CCCEEEECC----CCCcCcC
Confidence 456667789999999866554445566777777765 899987 89999999999997 999999831 1111100
Q ss_pred c---ccc-ccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015424 329 T---ETF-EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 329 ~---~Tf-~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 392 (407)
+ ... .+++.....+.+.. ...++++|+.|||.+++|+.++..+|||+|.||++++..++
T Consensus 231 ~~~~~~~g~p~~~~l~~v~~~~-----~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e 293 (404)
T 1eep_A 231 TRIVAGVGVPQITAICDVYEAC-----NNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKE 293 (404)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHH-----TTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTT
T ss_pred ccccCCCCcchHHHHHHHHHHH-----hhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCC
Confidence 0 001 12333333333321 11368999999999999999999999999999999987644
No 82
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=98.78 E-value=2.4e-08 Score=98.05 Aligned_cols=175 Identities=17% Similarity=0.181 Sum_probs=119.0
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHH--H--HhcCCCCcEEec---------cc----cCC-HHHHHHHH
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEA--V--RSAGVKCPLLCK---------EF----IVD-AWQIYYAR 258 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~--V--r~a~v~lPVL~K---------DF----Iid-~~QI~eAr 258 (407)
.++..+.....++|+++|-+ |++ .+.. . +....++|++.+ |. .++ .+.+.+|.
T Consensus 48 ~~~k~lv~~~~~~~~~avl~--~~g-------~~~~a~~~~~~~~~~~glil~l~~~~~l~~~~~~~~l~~~~~~ve~a~ 118 (304)
T 1to3_A 48 TDFKVNAAKILSPYASAVLL--DQQ-------FCYRQAVEQNAVAKSCAMIVAADDFIPGNGIPVDNVVLDKKINAQAVK 118 (304)
T ss_dssp HHHHHHHHHHHGGGCSEEEE--CTT-------TTHHHHHHTTCSCTTSEEEEECEEEEEETTEEEEEEEECSSCCHHHHH
T ss_pred hhHHHHHHHHHhcCCCEEEe--CHH-------HHHHHhhcccccCCCCcEEEEECCCCCCCCCccchhhccCchhHHHHH
Confidence 47788888889999887654 443 2222 2 111245676622 22 222 47788999
Q ss_pred HcCCCEEEEeccCCCH-------HHHHHHHHHHHHcCCcEEEEeC--------------CHHH-HHHHhcccCCcEEEee
Q 015424 259 TKGADAVLLIAAVLPD-------LDIRYMTKICKLLGLTALVEVH--------------DERE-MDRVLGIEGIELIGIN 316 (407)
Q Consensus 259 ~~GADaVLLiaaiL~~-------~~L~~Li~~a~~LGL~aLVEVh--------------t~eE-lerAl~l~Ga~iIGIN 316 (407)
.+|||+|-+...+-++ +++.++.+.|+++||..++|+- ...+ +..+.++ |+|+|++.
T Consensus 119 ~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~l-GaD~iKv~ 197 (304)
T 1to3_A 119 RDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDS-GADLYKVE 197 (304)
T ss_dssp HTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTS-SCSEEEEC
T ss_pred HcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHc-CCCEEEeC
Confidence 9999999855544432 5678888999999999999982 2345 5666776 99999996
Q ss_pred ccccccccccccccccccCchhHHHHhhcccccccccCCce-EEEeeCCCCH----HHHHHHHHcCCCEEEEcccccCC-
Q 015424 317 NRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNII-VVGESGLFTP----DDIAYVQEAGVKAVLVGESIVKQ- 390 (407)
Q Consensus 317 nRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~-vVAESGI~t~----eD~~~l~~~GadaVLVGeaLmk~- 390 (407)
.-- ++ +. +.+...++.+... .. -.++ +|..||+ ++ +.+..++++|++||+||.+|++.
T Consensus 198 ~~~-----~~---~g---~~~~~~~vv~~~~--~~--~~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~ 261 (304)
T 1to3_A 198 MPL-----YG---KG---ARSDLLTASQRLN--GH--INMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGRAVWSSV 261 (304)
T ss_dssp CGG-----GG---CS---CHHHHHHHHHHHH--HT--CCSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESHHHHGGG
T ss_pred CCc-----CC---CC---CHHHHHHHHHhcc--cc--CCCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEehHHhCcc
Confidence 321 00 01 4444455544310 00 2456 9999999 56 34888999999999999999999
Q ss_pred ---CChHHHH
Q 015424 391 ---DDPGKGI 397 (407)
Q Consensus 391 ---~dp~~~i 397 (407)
+||.+.+
T Consensus 262 ~~~~dp~~~~ 271 (304)
T 1to3_A 262 IGLPDTELML 271 (304)
T ss_dssp TTCSCHHHHH
T ss_pred ccCCCHHHHH
Confidence 9999988
No 83
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=98.73 E-value=9.2e-08 Score=88.38 Aligned_cols=188 Identities=10% Similarity=0.000 Sum_probs=121.7
Q ss_pred CHHHHHHHHHHcC--CcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE--eccccCCHHHHHHHHHcCCCEEEEeccCCC
Q 015424 198 DPVEIARSYEKGG--AACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (407)
Q Consensus 198 dp~~iA~ay~~~G--A~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (407)
+..+..+..++.| +.++-| .++.|...+++.++.+|+...+.+|+ +|=..++..-+..+..+|||.|.+-+.. .
T Consensus 14 ~~~~~~~~~~~~~~~v~~~kv-~~~~f~~~G~~~i~~l~~~~p~~~v~lD~kl~dip~t~~~~~~~~Gad~itvh~~~-g 91 (216)
T 1q6o_A 14 TMDSAYETTRLIAEEVDIIEV-GTILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCA-D 91 (216)
T ss_dssp SHHHHHHHHHHHGGGCSEEEE-CHHHHHHHCTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTS-C
T ss_pred CHHHHHHHHHHhcccCCEEEE-CHHHHHHhCHHHHHHHHHhCCCCeEEEEEEecccHHHHHHHHHhCCCCEEEEeccC-C
Confidence 4444444444444 366776 55666667788999999751134444 4433345555667889999999987654 3
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeC-C--HHHHHHHhcccCCcEEEeecccc-ccccccccccccccCchhHHHHhhccccc
Q 015424 274 DLDIRYMTKICKLLGLTALVEVH-D--EREMDRVLGIEGIELIGINNRNL-AISIFSYRTETFEVDNSNTKKLLEGERGE 349 (407)
Q Consensus 274 ~~~L~~Li~~a~~LGL~aLVEVh-t--~eElerAl~l~Ga~iIGINnRdL-~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~ 349 (407)
...++.+++.+++.|+.+.+++- . ....+.+..+ |...+....--+ ..+| ++. .++....+.+.
T Consensus 92 ~~~l~~~~~~~~~~g~~~~~~ll~~~t~~~~~~l~~~-~~~~~vl~~a~~~~~~G--~~g-----~~~~i~~lr~~---- 159 (216)
T 1q6o_A 92 INTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDA-GIGQVVYHRSRDAQAAG--VAW-----GEADITAIKRL---- 159 (216)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCCCHHHHHHHHHT-TCCEEEEECCHHHHHTT--CCC-----CHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHcCCCceeeeeeCCChhhHHHHHhc-CcHHHHHHHHHHHHhcC--CCC-----CHHHHHHHHHh----
Confidence 44588899999999999866433 2 4555555554 554444311101 0011 110 23444444433
Q ss_pred ccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 350 IIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 350 ~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
. +.++.+++.|||+ ++.+..+.++|+|.++||++|++++||.++++++..
T Consensus 160 -~-~~~~~i~v~GGI~-~~~~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~ 209 (216)
T 1q6o_A 160 -S-DMGFKVTVTGGLA-LEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKR 209 (216)
T ss_dssp -H-HTTCEEEEESSCC-GGGGGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHH
T ss_pred -c-CCCCcEEEECCcC-hhhHHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHH
Confidence 1 2356799999996 889999999999999999999999999998888753
No 84
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.69 E-value=5.2e-08 Score=101.45 Aligned_cols=184 Identities=15% Similarity=0.171 Sum_probs=118.5
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEEecCCcCCC--CHHHHHHHHhcCCCCcEEecc-------------ccCCHHHHHHHHH
Q 015424 195 EDFDPVEIARSYEKGGAACLSILTDEKYFKG--SFENLEAVRSAGVKCPLLCKE-------------FIVDAWQIYYART 259 (407)
Q Consensus 195 ~~~dp~~iA~ay~~~GA~aISVLTd~~~F~G--s~edL~~Vr~a~v~lPVL~KD-------------FIid~~QI~eAr~ 259 (407)
++.+..+..+.+.+.+...+-|+.+.+-+.| +.+|+..... -|..+|| ..-+...+....+
T Consensus 166 ~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~----~p~a~~d~~grL~v~aavG~~~d~~~~a~~l~~ 241 (496)
T 4fxs_A 166 EGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAES----KPNACKDEQGRLRVGAAVGAAPGNEERVKALVE 241 (496)
T ss_dssp CC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CC----CTTCCBCTTSCBCCEEECCSSSCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhc----ccchhhhcccceeeeeeeccccchHHHHHHHHh
Confidence 4556677777788888899999988877777 4556654432 2333333 1123456667788
Q ss_pred cCCCEEEEeccCCCHHHHHHHHHHHHH-c-CCcEEE-EeCCHHHHHHHhcccCCcEEEeeccccccccccccccc---c-
Q 015424 260 KGADAVLLIAAVLPDLDIRYMTKICKL-L-GLTALV-EVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTET---F- 332 (407)
Q Consensus 260 ~GADaVLLiaaiL~~~~L~~Li~~a~~-L-GL~aLV-EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~T---f- 332 (407)
+|+|.|.+..+.-....+.++++..++ + ++.+++ .+.+.++++.+.++ |++.|-+.. +++...++.. .
T Consensus 242 aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~a-GaD~I~Vg~----g~Gs~~~tr~~~g~g 316 (496)
T 4fxs_A 242 AGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEA-GVSAVKVGI----GPGSICTTRIVTGVG 316 (496)
T ss_dssp TTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHH-TCSEEEECS----SCCTTBCHHHHHCCC
T ss_pred ccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHh-CCCEEEECC----CCCcCcccccccCCC
Confidence 999999998886544455566666555 4 788777 59999999999997 999988742 1111111110 1
Q ss_pred ccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015424 333 EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 333 ~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 392 (407)
.+++....++.+..+ ..++++|+.|||.+++|+.++..+||++|.||++|.....
T Consensus 317 ~p~~~~i~~v~~~~~-----~~~iPVIa~GGI~~~~di~kala~GAd~V~iGs~f~~t~E 371 (496)
T 4fxs_A 317 VPQITAIADAAGVAN-----EYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEE 371 (496)
T ss_dssp CCHHHHHHHHHHHHG-----GGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTT
T ss_pred ccHHHHHHHHHHHhc-----cCCCeEEEeCCCCCHHHHHHHHHcCCCeEEecHHHhcCCC
Confidence 234444445544311 2368999999999999999999999999999999987653
No 85
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=98.68 E-value=6.5e-07 Score=90.10 Aligned_cols=175 Identities=15% Similarity=0.090 Sum_probs=111.8
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEe--ccccCCHHHHHHHHHcCCCEEEEeccCCCHHHH
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC--KEFIVDAWQIYYARTKGADAVLLIAAVLPDLDI 277 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~--KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L 277 (407)
.++|.+..+.|. +-++. . .-+.+++....+. +..++.. ++--.+...+..+.++|+|.|.+.++.-....+
T Consensus 56 ~~lA~A~a~~Gg--~gvi~--~--~~s~ee~~~~i~~-~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~ 128 (361)
T 3r2g_A 56 SNMANFMHSKGA--MGALH--R--FMTIEENIQEFKK-CKGPVFVSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYV 128 (361)
T ss_dssp HHHHHHHHHTTC--EEBCC--S--CSCHHHHHHHHHT-CCSCCBEEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHH
T ss_pred HHHHHHHHHcCC--CEEEe--C--CCCHHHHHHHHhh-cceEEEEEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhH
Confidence 568888877763 55554 1 1577777654432 3333332 221111234666788999988887665434445
Q ss_pred HHHHHHHHHc--CCcEEE-EeCCHHHHHHHhcccCCcEEEeeccccccccccccccc-cccCchhHHHHhhccccccccc
Q 015424 278 RYMTKICKLL--GLTALV-EVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTET-FEVDNSNTKKLLEGERGEIIRQ 353 (407)
Q Consensus 278 ~~Li~~a~~L--GL~aLV-EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~T-f~vDl~~t~~L~~~~~~~~i~~ 353 (407)
.+.++.+++. ++.+++ .|.|.+++..+.++ |+|.|-+.+- +|...++.. ..+.......+.+. .. .
T Consensus 129 ~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~a-GaD~I~Vg~g----~G~~~~tr~~~g~g~p~l~aI~~~-~~--~-- 198 (361)
T 3r2g_A 129 GKTLKSLRQLLGSRCIMAGNVATYAGADYLASC-GADIIKAGIG----GGSVCSTRIKTGFGVPMLTCIQDC-SR--A-- 198 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHT-TCSEEEECCS----SSSCHHHHHHHCCCCCHHHHHHHH-TT--S--
T ss_pred HHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHc-CCCEEEEcCC----CCcCccccccCCccHHHHHHHHHH-HH--h--
Confidence 5666777764 899999 79999999999997 9999988421 111111000 01111222233221 10 0
Q ss_pred CCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015424 354 KNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 354 ~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 392 (407)
.. ++|+.|||.++.|+.++..+|||+|.||+.|+....
T Consensus 199 ~~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~E 236 (361)
T 3r2g_A 199 DR-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAP 236 (361)
T ss_dssp SS-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTT
T ss_pred CC-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCcc
Confidence 12 899999999999999999999999999999998754
No 86
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=98.68 E-value=2.4e-07 Score=90.90 Aligned_cols=158 Identities=14% Similarity=0.142 Sum_probs=108.2
Q ss_pred cCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEec-c----ccCCH------HHHHHHHHcCCCEEEEeccCCCH---
Q 015424 209 GGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCK-E----FIVDA------WQIYYARTKGADAVLLIAAVLPD--- 274 (407)
Q Consensus 209 ~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~K-D----FIid~------~QI~eAr~~GADaVLLiaaiL~~--- 274 (407)
+|++||-+- .--++.+.....++|++.| + +.-++ +++.+|...|||+|.+-..+-++
T Consensus 84 ~g~dav~~~---------~G~~~~~~~~~~~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~~Gs~~~~ 154 (295)
T 3glc_A 84 EHADVLMCT---------RGILRSVVPPATNRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEYEH 154 (295)
T ss_dssp GGCSEEEEC---------HHHHHHHSCGGGCCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEECTTSTTHH
T ss_pred cCCCEEEEC---------HhHHhhhccccCCccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEECCCCcHH
Confidence 579998872 3334433221136776632 1 11111 26888999999999987665542
Q ss_pred ---HHHHHHHHHHHHcCCcEEEEeCC-------HH----HHHHHhcccCCcEEEeeccccccccccccccccccCchhHH
Q 015424 275 ---LDIRYMTKICKLLGLTALVEVHD-------ER----EMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTK 340 (407)
Q Consensus 275 ---~~L~~Li~~a~~LGL~aLVEVht-------~e----ElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~ 340 (407)
+++.++.+.|+++||-+++|.+- .+ ....+.++ ||++|.++ + |. +...
T Consensus 155 ~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~el-GAD~VKt~---~-------t~-------e~~~ 216 (295)
T 3glc_A 155 QSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEM-GAQIIKTY---Y-------VE-------KGFE 216 (295)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHT-TCSEEEEE---C-------CT-------TTHH
T ss_pred HHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHh-CCCEEEeC---C-------CH-------HHHH
Confidence 24557788888899999997643 22 34556677 99999995 3 21 2345
Q ss_pred HHhhcccccccccCCceEEEeeCCCC-H----HHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015424 341 KLLEGERGEIIRQKNIIVVGESGLFT-P----DDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 401 (407)
Q Consensus 341 ~L~~~~~~~~i~~~~v~vVAESGI~t-~----eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 401 (407)
++... ..+++|++||+++ . +.+..+.++|++|+.||.+|+..+||.+.++.|.
T Consensus 217 ~vv~~--------~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~~~al~ 274 (295)
T 3glc_A 217 RIVAG--------CPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQ 274 (295)
T ss_dssp HHHHT--------CSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHH
T ss_pred HHHHh--------CCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHHHHHHH
Confidence 55543 2468999999985 3 2566777999999999999999999998887775
No 87
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=98.67 E-value=2.8e-07 Score=92.58 Aligned_cols=171 Identities=19% Similarity=0.208 Sum_probs=108.8
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEe-----ccccCCHHHHHHHHHcCCCEEEEeccC---
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC-----KEFIVDAWQIYYARTKGADAVLLIAAV--- 271 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~-----KDFIid~~QI~eAr~~GADaVLLiaai--- 271 (407)
..+|++..+.|+. -++++- ..-+++++.... .+-|+.. +|.-.....+..|..+|++++.|.+..
T Consensus 100 ~~la~aa~~~G~~--~~~s~~--~s~~le~v~~~~---~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~ 172 (368)
T 2nli_A 100 AGTARAVSEFGTI--MSISAY--SGATFEEISEGL---NGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVS 172 (368)
T ss_dssp HHHHHHHHHHTCC--EEECTT--CSSCHHHHHHHH---TTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC--
T ss_pred HHHHHHHHHcCCC--EEeech--HhHHHHHHHHhC---CCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcc
Confidence 6788888888863 234432 123566654432 1345432 332222334556777888887765541
Q ss_pred ------------CC----------------------------HHHHHHHHHHHHHcCCcEEE-EeCCHHHHHHHhcccCC
Q 015424 272 ------------LP----------------------------DLDIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGI 310 (407)
Q Consensus 272 ------------L~----------------------------~~~L~~Li~~a~~LGL~aLV-EVht~eElerAl~l~Ga 310 (407)
++ ...++.+-...+..++.++| ++++.++++++.++ |+
T Consensus 173 g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v~~~e~a~~a~~~-Ga 251 (368)
T 2nli_A 173 GNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGHSGLPVFVKGIQHPEDADMAIKR-GA 251 (368)
T ss_dssp -CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHHHSSSCEEEEEECSHHHHHHHHHT-TC
T ss_pred cchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHc-CC
Confidence 00 01122222222336777776 79999999999997 99
Q ss_pred cEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 311 ELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 311 ~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
+.|.+.|..- ....+...+++...++.+.+ +.++++|+.|||.+.+|+.++..+|||+|.||..++..
T Consensus 252 d~I~vs~~gg------r~~~~g~~~~~~l~~v~~~v------~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~ 319 (368)
T 2nli_A 252 SGIWVSNHGA------RQLYEAPGSFDTLPAIAERV------NKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFG 319 (368)
T ss_dssp SEEEECCGGG------TSCSSCCCHHHHHHHHHHHH------TTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred CEEEEcCCCc------CCCCCCCChHHHHHHHHHHh------CCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHH
Confidence 9999988421 00033334555555555432 23689999999999999999999999999999988865
No 88
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=98.63 E-value=9.1e-08 Score=91.37 Aligned_cols=163 Identities=15% Similarity=0.124 Sum_probs=104.1
Q ss_pred HHHHHHHHHHcCCcEEEEEe-cCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHH
Q 015424 199 PVEIARSYEKGGAACLSILT-DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDI 277 (407)
Q Consensus 199 p~~iA~ay~~~GA~aISVLT-d~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L 277 (407)
..+++++..++||++|=+=- ..--....++.++.+|+ +++||+.--+...+. ..|+|++++- .+... +-
T Consensus 22 t~~~~~~l~~~GaD~ielG~S~Gvt~~~~~~~v~~ir~--~~~Pivlm~y~~n~i------~~G~dg~iiP-dLp~e-e~ 91 (240)
T 1viz_A 22 PDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR--FLVPCVLEVSAIEAI------VPGFDLYFIP-SVLNS-KN 91 (240)
T ss_dssp CHHHHHHHHTSCCSEEEECC----CHHHHHHHHHHHTT--SSSCEEEECSCGGGC------CSCCSEEEEE-EETTB-SS
T ss_pred cHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhhC--cCCCEEEecCccccc------cCCCCEEEEc-ccCcc-cC
Confidence 45678999999999998731 10001115677888876 689998533222121 6799998774 33322 22
Q ss_pred HHH-----HHHHHHcC-----CcEEEE---e----------------CCHHHHHHHhcccCC----cEEEeecccccccc
Q 015424 278 RYM-----TKICKLLG-----LTALVE---V----------------HDEREMDRVLGIEGI----ELIGINNRNLAISI 324 (407)
Q Consensus 278 ~~L-----i~~a~~LG-----L~aLVE---V----------------ht~eElerAl~l~Ga----~iIGINnRdL~~~~ 324 (407)
.++ ...++++| ++.+-+ + .+.+.+.+..+. |. .+|-...
T Consensus 92 ~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~-g~~~~~~~VYl~s------- 163 (240)
T 1viz_A 92 ADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARV-SELLQLPIFYLEY------- 163 (240)
T ss_dssp GGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHH-HHHTTCSEEEEEC-------
T ss_pred hhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHh-CcccCCCEEEEeC-------
Confidence 233 56788889 887762 2 345666665554 32 3443221
Q ss_pred ccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015424 325 FSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 325 ~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 392 (407)
.| ...+.+...++.+.. .+++++..|||+|+|+++++.+ |||+|+||+++++.++
T Consensus 164 ~G-----~~~~~~~i~~i~~~~-------~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~~~~ 218 (240)
T 1viz_A 164 SG-----VLGDIEAVKKTKAVL-------ETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYEDFD 218 (240)
T ss_dssp TT-----SCCCHHHHHHHHHTC-------SSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHHCHH
T ss_pred CC-----ccChHHHHHHHHHhc-------CCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHhCHH
Confidence 01 134555566665531 1678999999999999999999 9999999999998755
No 89
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.59 E-value=5.8e-07 Score=93.31 Aligned_cols=187 Identities=12% Similarity=0.126 Sum_probs=115.9
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEecc-------------ccCCHHHHHHHHHcC
Q 015424 195 EDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKE-------------FIVDAWQIYYARTKG 261 (407)
Q Consensus 195 ~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KD-------------FIid~~QI~eAr~~G 261 (407)
++.+..+..+.+.+.+...+-|+.+.+-+-|-...-..++. ..-|.-++| ..-...++..+.++|
T Consensus 190 ~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~--~~~~~~~~~~~~rl~vga~vG~~~~~~~~a~~~~~aG 267 (514)
T 1jcn_A 190 AGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKN--RDYPLASKDSQKQLLCGAAVGTREDDKYRLDLLTQAG 267 (514)
T ss_dssp TTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSC--CCCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHH--hhCcchhcccCCceeeeeEecCchhhHHHHHHHHHcC
Confidence 44455666777778888888888776656553321111111 111211111 011234566788999
Q ss_pred CCEEEEeccCCCHHHHHHHHHHHHHc--CCcEEE-EeCCHHHHHHHhcccCCcEEEeeccccccccccccccc---cccC
Q 015424 262 ADAVLLIAAVLPDLDIRYMTKICKLL--GLTALV-EVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTET---FEVD 335 (407)
Q Consensus 262 ADaVLLiaaiL~~~~L~~Li~~a~~L--GL~aLV-EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~T---f~vD 335 (407)
+|+|.+..+.-......++++.+++. ++.+++ +|++.+++.++.++ |++.|-+.+ ++|...++.. ....
T Consensus 268 ~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~a-Gad~I~vg~----~~G~~~~t~~~~~~g~~ 342 (514)
T 1jcn_A 268 VDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDA-GVDGLRVGM----GCGSICITQEVMACGRP 342 (514)
T ss_dssp CSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHH-TCSEEEECS----SCSCCBTTBCCCSCCCC
T ss_pred CCEEEeeccCCcchhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHc-CCCEEEECC----CCCcccccccccCCCcc
Confidence 99999977654333344566666665 888887 89999999999997 999996621 1111111111 1111
Q ss_pred chhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCC
Q 015424 336 NSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 336 l~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~d 392 (407)
...+..++..+.. ..++++|+.|||.+++|+.++..+||++|.||++|+..++
T Consensus 343 ~~~~~~~~~~~~~----~~~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~~~e 395 (514)
T 1jcn_A 343 QGTAVYKVAEYAR----RFGVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTE 395 (514)
T ss_dssp HHHHHHHHHHHHG----GGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTSTT
T ss_pred chhHHHHHHHHHh----hCCCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcCCc
Confidence 1222233322211 1368999999999999999999999999999999988653
No 90
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=98.56 E-value=3e-08 Score=94.37 Aligned_cols=168 Identities=12% Similarity=0.064 Sum_probs=105.4
Q ss_pred HHHHHHHHHHcCCcEEEEEe-cCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHH
Q 015424 199 PVEIARSYEKGGAACLSILT-DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDI 277 (407)
Q Consensus 199 p~~iA~ay~~~GA~aISVLT-d~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L 277 (407)
..+++++..++||++|=|=- ..--...-++-++.+|+ .++||+.--+-..+. .+|+|++++-. ++.. +-
T Consensus 22 t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~--~~~Pivl~~y~~n~i------~~gvDg~iipd-Lp~e-e~ 91 (234)
T 2f6u_A 22 TDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQ--YGLPIVVEPSDPSNV------VYDVDYLFVPT-VLNS-AD 91 (234)
T ss_dssp CHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTT--SCCCEEECCSSCCCC------CCCSSEEEEEE-ETTB-SB
T ss_pred cHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcC--CCCCEEEecCCcchh------hcCCCEEEEcc-cCCC-CC
Confidence 45678999999999998832 11001113455666665 589988533322222 67999998743 3322 12
Q ss_pred HHHH-----HHH-------HHcC-----CcEEEE-------------eC------CHHHHHHHhcccCC-----cEEEee
Q 015424 278 RYMT-----KIC-------KLLG-----LTALVE-------------VH------DEREMDRVLGIEGI-----ELIGIN 316 (407)
Q Consensus 278 ~~Li-----~~a-------~~LG-----L~aLVE-------------Vh------t~eElerAl~l~Ga-----~iIGIN 316 (407)
.+++ +.+ +++| ++.+-+ +. +.+.+.+.... |. .+|=..
T Consensus 92 ~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~~-g~~~l~~~~Vyl~ 170 (234)
T 2f6u_A 92 GDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALV-GEKLFNLPIIYIE 170 (234)
T ss_dssp GGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHH-HHHTTCCSEEEEE
T ss_pred HHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHHh-hhhhcCCCEEEEe
Confidence 2233 444 6678 888775 22 56556666654 55 333332
Q ss_pred ccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHH
Q 015424 317 NRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKG 396 (407)
Q Consensus 317 nRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~ 396 (407)
. .+ ...+.+...++.+.. .+++++..|||+|+|+++++.+ |||+|+||+++++. |.++
T Consensus 171 ~-------~G-----~~~~~~~i~~i~~~~-------~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~~--~~~~ 228 (234)
T 2f6u_A 171 Y-------SG-----TYGNPELVAEVKKVL-------DKARLFYGGGIDSREKAREMLR-YADTIIVGNVIYEK--GIDA 228 (234)
T ss_dssp C-------TT-----SCCCHHHHHHHHHHC-------SSSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHHH--CHHH
T ss_pred C-------CC-----CcchHHHHHHHHHhC-------CCCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHhC--HHHH
Confidence 1 11 134555666665531 1678999999999999999999 99999999999975 5566
Q ss_pred HHh
Q 015424 397 ITG 399 (407)
Q Consensus 397 i~~ 399 (407)
+++
T Consensus 229 ~~~ 231 (234)
T 2f6u_A 229 FLE 231 (234)
T ss_dssp HHT
T ss_pred HHh
Confidence 543
No 91
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.56 E-value=2.2e-06 Score=88.08 Aligned_cols=187 Identities=14% Similarity=0.112 Sum_probs=119.0
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEEecCCcCCC--CHHHHHHHHhc---C--CCCcEEecccc----CCHHHHHHHHHcCC
Q 015424 194 REDFDPVEIARSYEKGGAACLSILTDEKYFKG--SFENLEAVRSA---G--VKCPLLCKEFI----VDAWQIYYARTKGA 262 (407)
Q Consensus 194 ~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~G--s~edL~~Vr~a---~--v~lPVL~KDFI----id~~QI~eAr~~GA 262 (407)
.++.+..+.++.+.+.+...+-|+.+.+-+-| +.+||-..... . ...+++..-.+ .....+..+..+|+
T Consensus 167 ~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~~l~~~G~ 246 (491)
T 1zfj_A 167 AVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGA 246 (491)
T ss_dssp ETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHHHHHHHcCC
Confidence 34668899999999999999999987666666 56676655431 0 01122221111 12356666788899
Q ss_pred CEEEEeccCCCHHHHHHHHH-HHHHc-CCcEEE-EeCCHHHHHHHhcccCCcEEEeeccccccccccccc---ccc-ccC
Q 015424 263 DAVLLIAAVLPDLDIRYMTK-ICKLL-GLTALV-EVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRT---ETF-EVD 335 (407)
Q Consensus 263 DaVLLiaaiL~~~~L~~Li~-~a~~L-GL~aLV-EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~---~Tf-~vD 335 (407)
|+|.+..+.-....+.++++ ....+ ++.++. .+.+.+.+.+++++ |++.|-+.+- +|...++ .++ .+.
T Consensus 247 d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~-Gad~I~vg~g----~g~~~~tr~~~~~~~p~ 321 (491)
T 1zfj_A 247 DAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDA-GVDVVKVGIG----PGSICTTRVVAGVGVPQ 321 (491)
T ss_dssp SEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHT-TCSEEEECSS----CCTTBCHHHHTCCCCCH
T ss_pred CeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHc-CCCEEEECcc----CCcceEEeeecCCCCCc
Confidence 99998764332222333333 34445 555543 56789999999997 9999977521 0100000 111 123
Q ss_pred chhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 336 NSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 336 l~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
+....++.... ...++++|+.|||.+++|+.++..+||++|.+|++++..
T Consensus 322 ~~~l~~~~~~~-----~~~~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~~~ 371 (491)
T 1zfj_A 322 VTAIYDAAAVA-----REYGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFAGT 371 (491)
T ss_dssp HHHHHHHHHHH-----HHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred HHHHHHHHHHH-----hhcCCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhhCC
Confidence 33333443321 013689999999999999999999999999999999864
No 92
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.54 E-value=8.3e-07 Score=85.36 Aligned_cols=136 Identities=16% Similarity=0.195 Sum_probs=90.6
Q ss_pred CCcEEeccccCCHH------HHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEE--EEeC-CHHHHHHHhcccC
Q 015424 239 KCPLLCKEFIVDAW------QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTAL--VEVH-DEREMDRVLGIEG 309 (407)
Q Consensus 239 ~lPVL~KDFIid~~------QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aL--VEVh-t~eElerAl~l~G 309 (407)
++|++.--+..+-+ -+..++++|+|++++- -|+.++..++.+.++++|++.+ +--. +.+.++++.+. +
T Consensus 88 ~~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~Iip--DLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~-a 164 (252)
T 3tha_A 88 KKALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVP--ELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKH-A 164 (252)
T ss_dssp SSEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECT--TCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTT-C
T ss_pred CCCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeC--CCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHh-C
Confidence 47987655533322 2456889999998763 3777788899999999999873 3333 47778877776 4
Q ss_pred CcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 310 IELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 310 a~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
..+|-...+ .|+|...-..+ +...++++.++. . .+.+++..+||+++++++.+.+ +||||+||++|++
T Consensus 165 ~gFiY~Vs~------~GvTG~~~~~~-~~~~~~v~~vr~--~--~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk 232 (252)
T 3tha_A 165 KGFIYLLAS------IGITGTKSVEE-AILQDKVKEIRS--F--TNLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVK 232 (252)
T ss_dssp CSCEEEECC------SCSSSCSHHHH-HHHHHHHHHHHT--T--CCSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHH
T ss_pred CCeEEEEec------CCCCCcccCCC-HHHHHHHHHHHH--h--cCCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHH
Confidence 455555433 23333222211 122334443322 1 3578999999999999999876 5999999999986
No 93
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.42 E-value=8.1e-07 Score=86.78 Aligned_cols=177 Identities=16% Similarity=0.178 Sum_probs=107.4
Q ss_pred HHHHHHHHHHcCCcEEEEEecCC-cCC-CCHHHHHHHHhcCCCCcEEeccc--cCCHHHHHHHHHcCCCEEEEeccCCCH
Q 015424 199 PVEIARSYEKGGAACLSILTDEK-YFK-GSFENLEAVRSAGVKCPLLCKEF--IVDAWQIYYARTKGADAVLLIAAVLPD 274 (407)
Q Consensus 199 p~~iA~ay~~~GA~aISVLTd~~-~F~-Gs~edL~~Vr~a~v~lPVL~KDF--Iid~~QI~eAr~~GADaVLLiaaiL~~ 274 (407)
..++++...+.|+++|-|=|+.- .|. --.+.+..+|+. +++||+-|.- +=+..|| .-|||++++. ++|+.
T Consensus 55 ~~~~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~-~~lPvil~fPP~~g~~~~i----~~~aDa~l~p-svlNs 128 (286)
T 3vk5_A 55 AVEKAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAA-TPLPVVLHFPPRPGAGFPV----VRGADALLLP-ALLGS 128 (286)
T ss_dssp HHHHHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHHH-CSSCEEEECCCBTTTBSCC----CTTCSEEEEE-EETTB
T ss_pred HHHHHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHHh-CCCCEEEECCCCCCCcccc----ccCCCEEEEE-EEecC
Confidence 33477888889999999865421 111 223456677775 7999998542 0122333 3599999874 56644
Q ss_pred HHHHHHHHH---------H----HHcCCcEEEE----eC---------------CHHHH--H-HH---hcccCCcEEEee
Q 015424 275 LDIRYMTKI---------C----KLLGLTALVE----VH---------------DEREM--D-RV---LGIEGIELIGIN 316 (407)
Q Consensus 275 ~~L~~Li~~---------a----~~LGL~aLVE----Vh---------------t~eEl--e-rA---l~l~Ga~iIGIN 316 (407)
.+-.+++.. . +++| +++-| |. +.+.+ . .+ ..+ |..+|=..
T Consensus 129 ~n~~~i~g~~~~~~aa~~v~~~~~~~g-e~ip~gYL~v~~g~k~V~fv~~~~~~~~e~A~~~aYa~~gad~-G~~lV~LD 206 (286)
T 3vk5_A 129 GDDYFVWKSFLETLAAFPGRIPREEWP-ELLLTVALTFGEDPRTGDLLGTVPVSTASTEEIDRYLHVARAF-GFHMVYLY 206 (286)
T ss_dssp SSHHHHTHHHHHHHHHCSTTSCGGGCC-EEEEEEEEECSCCHHHHHHHCBCCCCCSSSHHHHHHHHHHHHT-TCSEEEEE
T ss_pred CCcccccCcHHHHHHhHHHHHHHHHhC-CcceEEEEEECCCCceeeeeCCCCCCCHHHHHHHHHHHHHHHc-CCCEEEEc
Confidence 344445443 2 4445 44322 22 22211 1 11 122 44555332
Q ss_pred ccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHH
Q 015424 317 NRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKG 396 (407)
Q Consensus 317 nRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~ 396 (407)
. ..-.++++...++.+.+ ..+++++..|||+|++|++++.++|||+|+||+++++.+ ..+.
T Consensus 207 ---~---------~~~~v~~e~V~~I~~~~------~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d~-~Pel 267 (286)
T 3vk5_A 207 ---S---------RNEHVPPEVVRHFRKGL------GPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQPD-WRSA 267 (286)
T ss_dssp ---C---------SSSCCCHHHHHHHHHHS------CTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSSTT-HHHH
T ss_pred ---C---------CCCcCCHHHHHHHHHhc------CCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcCC-CHHH
Confidence 1 11235555666665541 116799999999999999999999999999999999985 4466
Q ss_pred HHhhhc
Q 015424 397 ITGLFG 402 (407)
Q Consensus 397 i~~L~~ 402 (407)
++++.+
T Consensus 268 v~e~a~ 273 (286)
T 3vk5_A 268 LAEIAG 273 (286)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 777664
No 94
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=98.40 E-value=5.7e-06 Score=81.72 Aligned_cols=171 Identities=11% Similarity=0.025 Sum_probs=100.8
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHH---HHHHHcC--CCEEEEeccCCCH
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQI---YYARTKG--ADAVLLIAAVLPD 274 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI---~eAr~~G--ADaVLLiaaiL~~ 274 (407)
.++|.+..+.|.-.+-+..++. -..+.++.+++. .+|+-.. +..++..+ ..+...| +|.|.+..+.=..
T Consensus 60 ~~la~a~~~~gg~g~~~~~~~~---~~~~~i~~~~~~--g~~v~v~-~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~ 133 (336)
T 1ypf_A 60 ERIATYLAENNYFYIMHRFQPE---KRISFIRDMQSR--GLIASIS-VGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHS 133 (336)
T ss_dssp HHHHHHHHHTTCCCCCCCSSGG---GHHHHHHHHHHT--TCCCEEE-ECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCS
T ss_pred HHHHHHHHhCCCEEEecCCCCH---HHHHHHHHHHhc--CCeEEEe-CCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCc
Confidence 5676654444332222222221 123344555543 4455433 44445433 3345778 9998876532122
Q ss_pred HHHHHHHHHHHH-c-CCcEEEE-eCCHHHHHHHhcccCCcEEEeeccccccccccccccc---cc-c--CchhHHHHhhc
Q 015424 275 LDIRYMTKICKL-L-GLTALVE-VHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTET---FE-V--DNSNTKKLLEG 345 (407)
Q Consensus 275 ~~L~~Li~~a~~-L-GL~aLVE-Vht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~T---f~-v--Dl~~t~~L~~~ 345 (407)
....++++..++ . +..++.- +.+.++++++.++ |++.|-+.|..- ....+.. .. . .+....++.+.
T Consensus 134 ~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~a-Gad~Ivvs~hgG----~~~~~~~~~~~g~~g~~~~~l~~v~~~ 208 (336)
T 1ypf_A 134 NAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENA-GADATKVGIGPG----KVCITKIKTGFGTGGWQLAALRWCAKA 208 (336)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHH-TCSEEEECSSCS----TTCHHHHHHSCSSTTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHc-CCCEEEEecCCC----ceeecccccCcCCchhHHHHHHHHHHH
Confidence 233445555444 4 5666666 8899999999997 999998855210 0000000 00 0 22233333332
Q ss_pred ccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 346 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 346 ~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
-++++|+.|||.+..|+.++..+||++|.||++++.
T Consensus 209 --------~~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~ 244 (336)
T 1ypf_A 209 --------ASKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAG 244 (336)
T ss_dssp --------CSSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTT
T ss_pred --------cCCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhc
Confidence 268999999999999999999999999999999994
No 95
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.30 E-value=1.4e-05 Score=71.55 Aligned_cols=182 Identities=13% Similarity=0.059 Sum_probs=99.8
Q ss_pred HHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcC--CCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHH
Q 015424 202 IARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAG--VKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRY 279 (407)
Q Consensus 202 iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~--v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~ 279 (407)
..+.+.+.+.+ +-+++-.---...++-++.+|+.. ..+|++.-.. +...+.++...|||.+++-...++..++
T Consensus 17 a~~~~~~~~~d-lvl~D~~~p~~~g~~~~~~l~~~~~~~~i~vi~~~~--~~~~~~~~~~~Ga~~~l~kp~~~~~~~l-- 91 (237)
T 3cwo_X 17 AVEKYKELKPD-IVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG--QQAMVIEAIKAGAKDFIVNTAAVENPSL-- 91 (237)
T ss_dssp THHHHHHHCCS-CEEEECCSTTSSHHHHHHHHHHHSSSCCEEEECCSS--THHHHHHHHHTTCCEEEESHHHHHCTHH--
T ss_pred HHHHHHhcCCC-EEEEeCCCCCCCHHHHHHHHHHhCCCCCEEEEECCC--CHHHHHHHHHCCHHheEeCCcccChHHH--
Confidence 34445555666 333332211123467777777531 3467664321 2667788999999999864321222223
Q ss_pred HHHHHHHcCCcE-EEEe---------------------CCHHHH-HHHhcccCCcEEEeeccccccccccccccccccCc
Q 015424 280 MTKICKLLGLTA-LVEV---------------------HDEREM-DRVLGIEGIELIGINNRNLAISIFSYRTETFEVDN 336 (407)
Q Consensus 280 Li~~a~~LGL~a-LVEV---------------------ht~eEl-erAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl 336 (407)
+....+.++... ++.+ .+..+. .++... ++..+-+...+--+ +--..+.
T Consensus 92 ~~~i~~~~~~~~~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~~~~-~~~~vli~~~~~~g-------~~~g~~~ 163 (237)
T 3cwo_X 92 ITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKR-GAGEILLTSIDRDG-------TKSGYDT 163 (237)
T ss_dssp HHHHHHHHTGGGEEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHHHHH-TCSEEEEEETTTTT-------CCSCCCH
T ss_pred HHHHHHHhCCCceEEEeeecccCCcEEEEEeCCccccccCHHHHHHHHhhc-CCCeEEEEecCCCC-------ccccccH
Confidence 122233445442 2222 133343 444443 56534343321101 1112233
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC-ChHHHHHhhhcCc
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD-DPGKGITGLFGKD 404 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~-dp~~~i~~L~~~~ 404 (407)
+...++... .+.++|+.+|+.+++|+.++.++|+++++||++++..+ ++.+..+.|....
T Consensus 164 ~~i~~~~~~--------~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~~~~~~~~~~~~l~~~~ 224 (237)
T 3cwo_X 164 EMIRFVRPL--------TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEYLKKHG 224 (237)
T ss_dssp HHHHHHGGG--------CCSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHTTSSCHHHHHHHHHTTT
T ss_pred HHHHHHHHh--------cCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHcCCCCHHHHHHHHHHCC
Confidence 344444332 36799999999999999999999999999999996655 5555555554433
No 96
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=98.30 E-value=3e-06 Score=79.33 Aligned_cols=176 Identities=14% Similarity=0.078 Sum_probs=117.3
Q ss_pred CcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEe--ccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcC
Q 015424 211 AACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC--KEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLG 288 (407)
Q Consensus 211 A~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~--KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LG 288 (407)
+..+.| -++-|+..+++-++.+|+...+.+|.. |=.=++..-...+..+|||.+.+-+.. +...++..++.+++.|
T Consensus 31 ~~~ikv-g~~lf~~~G~~~v~~l~~~~p~~~iflDlKl~Dip~t~~~~~~~~Gad~vtVH~~~-g~~~l~~a~~~~~~~g 108 (221)
T 3exr_A 31 VDVIEA-GTVCLLQVGSELVEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICSA-TIPTMKAARKAIEDIN 108 (221)
T ss_dssp CSEEEE-CHHHHHHHCTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHTTTCSEEEEETTS-CHHHHHHHHHHHHHHC
T ss_pred ceEEEE-CHHHHHhcCHHHHHHHHHhCCCCcEEEEEEeeccHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHHHhcC
Confidence 788888 445666667888999987511445542 222133333444678999998885543 4556888999888888
Q ss_pred ---CcEEEEeCC---HHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEee
Q 015424 289 ---LTALVEVHD---EREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGES 362 (407)
Q Consensus 289 ---L~aLVEVht---~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAES 362 (407)
....|.+.+ .++++..++. +++.+.++.--+++. ............+.+. ...++.+..-|
T Consensus 109 ~~~~~~~Vt~lts~~~~~~~~~~~~-~~~~~v~~~a~~~~~------~Gvv~s~~e~~~ir~~------~~~~~~i~v~g 175 (221)
T 3exr_A 109 PDKGEIQVELYGDWTYDQAQQWLDA-GISQAIYHQSRDALL------AGETWGEKDLNKVKKL------IEMGFRVSVTG 175 (221)
T ss_dssp TTTCEEEEECCSSCCHHHHHHHHHT-TCCEEEEECCHHHHH------HTCCCCHHHHHHHHHH------HHHTCEEEEES
T ss_pred CCcceEEEEEcCCCCHHHHHHHHcC-CHHHHHHHHHHhcCC------CccccCHHHHHHHHHh------hcCCceEEEEC
Confidence 666777665 6677677775 777776643222110 0111122233333332 12356678899
Q ss_pred CCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 363 GLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 363 GI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
|| +++++..+.++|+|.++||++|++++||.++++++..
T Consensus 176 GI-~~~~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~ 214 (221)
T 3exr_A 176 GL-SVDTLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKD 214 (221)
T ss_dssp SC-CGGGGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHH
Confidence 99 8889999999999999999999999999998887753
No 97
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=98.29 E-value=2.6e-06 Score=81.25 Aligned_cols=169 Identities=12% Similarity=0.133 Sum_probs=98.4
Q ss_pred HHHHHHHHcCCcEEEEEecCCcCC-CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCH--HHH
Q 015424 201 EIARSYEKGGAACLSILTDEKYFK-GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD--LDI 277 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVLTd~~~F~-Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~--~~L 277 (407)
+.++...++|+++|-|=-..+... .-.+-++.+|+ .++||+- |.-++.++ ..|||++++-. ++.. .++
T Consensus 27 ~~l~~~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~--~~~Piil--~p~~~~~~----~~gaD~il~ps-lln~~~~~~ 97 (235)
T 3w01_A 27 DDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR--YPLPLVL--EISNIESV----MPGFDFYFVPT-VLNSTDVAF 97 (235)
T ss_dssp HHHHHHHTSSCSEEEECCSSCCCHHHHHHHHHHHTT--SCSCEEE--ECCCSTTC----CTTCSEEEEEE-ETTBSSGGG
T ss_pred HHHHHHHHcCCCEEEECCcCCcCHHHHHHHHHHhcC--cCCCEEE--ecCCHHHh----hcCCCEEEEcc-ccCCCCcch
Confidence 344556789999998832111100 01233445554 6899864 22233333 45999998854 4432 222
Q ss_pred --HHHHHHHHHcCC-----cEEEE----eC--C-------------HHHHHHH-h---cccCCcEEEeeccccccccccc
Q 015424 278 --RYMTKICKLLGL-----TALVE----VH--D-------------EREMDRV-L---GIEGIELIGINNRNLAISIFSY 327 (407)
Q Consensus 278 --~~Li~~a~~LGL-----~aLVE----Vh--t-------------~eElerA-l---~l~Ga~iIGINnRdL~~~~~~~ 327 (407)
....+.++++|+ +++-| +. + .+++... + ++-|..+|-+....
T Consensus 98 i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~~~vY~e~sG-------- 169 (235)
T 3w01_A 98 HNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSG-------- 169 (235)
T ss_dssp TTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEECTT--------
T ss_pred hhhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCCCEEEEecCC--------
Confidence 112455788999 88775 21 2 2222111 1 11144555553211
Q ss_pred cccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015424 328 RTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 401 (407)
Q Consensus 328 t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 401 (407)
.+ .+.+...++.+. . .+.+++..+||+++++++.+.+ |||+|+||+++++. |. .+++++
T Consensus 170 --~~--g~~~~v~~ir~~-----~--~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~--~~-~~~e~v 228 (235)
T 3w01_A 170 --IY--GDVSKVQAVSEH-----L--TETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKD--IK-KALKTV 228 (235)
T ss_dssp --SC--CCHHHHHHHHTT-----C--SSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHC--HH-HHHHTT
T ss_pred --Cc--CCHHHHHHHHHh-----c--CCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecC--HH-HHHHHH
Confidence 11 255555555443 1 2679999999999999999998 99999999999994 43 344443
No 98
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.29 E-value=1.5e-05 Score=76.46 Aligned_cols=162 Identities=15% Similarity=0.081 Sum_probs=97.0
Q ss_pred HHHhcCCCCcEEeccccCCHHHH---HHHHH--cCCCEEEEecc----------CC-CHHHHHHHHHHHHHc-CCcEEE-
Q 015424 232 AVRSAGVKCPLLCKEFIVDAWQI---YYART--KGADAVLLIAA----------VL-PDLDIRYMTKICKLL-GLTALV- 293 (407)
Q Consensus 232 ~Vr~a~v~lPVL~KDFIid~~QI---~eAr~--~GADaVLLiaa----------iL-~~~~L~~Li~~a~~L-GL~aLV- 293 (407)
.+|+...+.|+...=+.-++.+. .+... +|+|+|-|... .. +...+.++++.+++. +..++|
T Consensus 91 ~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk 170 (311)
T 1ep3_A 91 WLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVK 170 (311)
T ss_dssp HHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 45542146787643333334333 22233 89999988643 11 334557777777764 888887
Q ss_pred ---EeCCHHH-HHHHhcccCCcEEEeecccccccc-cccccc--------ccc--cCchhHHHHhhcccccccccCCceE
Q 015424 294 ---EVHDERE-MDRVLGIEGIELIGINNRNLAISI-FSYRTE--------TFE--VDNSNTKKLLEGERGEIIRQKNIIV 358 (407)
Q Consensus 294 ---EVht~eE-lerAl~l~Ga~iIGINnRdL~~~~-~~~t~~--------Tf~--vDl~~t~~L~~~~~~~~i~~~~v~v 358 (407)
.+.+..+ ++.+.++ |++.|-+.|... +.. -+.+.. .+. .+......++..++. ..++++
T Consensus 171 ~~~~~~~~~~~a~~l~~~-G~d~i~v~~~~~-g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~----~~~ipv 244 (311)
T 1ep3_A 171 LSPNVTDIVPIAKAVEAA-GADGLTMINTLM-GVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQ----DVDIPI 244 (311)
T ss_dssp ECSCSSCSHHHHHHHHHT-TCSEEEECCCEE-ECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHT----TCSSCE
T ss_pred ECCChHHHHHHHHHHHHc-CCCEEEEeCCCc-ccccCcccCCccccCCCCcccCccchHHHHHHHHHHHH----hcCCCE
Confidence 4446566 5667776 999998865321 000 000000 010 111111233322221 126799
Q ss_pred EEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHh
Q 015424 359 VGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITG 399 (407)
Q Consensus 359 VAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~ 399 (407)
|+.|||.+++|+.++.++|||+|.||++++..++..+.+++
T Consensus 245 ia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~~~~~i~~ 285 (311)
T 1ep3_A 245 IGMGGVANAQDVLEMYMAGASAVAVGTANFADPFVCPKIID 285 (311)
T ss_dssp EECSSCCSHHHHHHHHHHTCSEEEECTHHHHCTTHHHHHHH
T ss_pred EEECCcCCHHHHHHHHHcCCCEEEECHHHHcCcHHHHHHHH
Confidence 99999999999999999999999999999998887655543
No 99
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=98.27 E-value=7.5e-06 Score=81.76 Aligned_cols=128 Identities=14% Similarity=0.093 Sum_probs=82.9
Q ss_pred HHHHHHHc--CCCEEEEeccCCCHHHHHHHHHHHHH-c-CCcEEE-EeCCHHHHHHHhcccCCcEEEeeccccccccccc
Q 015424 253 QIYYARTK--GADAVLLIAAVLPDLDIRYMTKICKL-L-GLTALV-EVHDEREMDRVLGIEGIELIGINNRNLAISIFSY 327 (407)
Q Consensus 253 QI~eAr~~--GADaVLLiaaiL~~~~L~~Li~~a~~-L-GL~aLV-EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~ 327 (407)
++....+. |+|++.+..+.-....+.+.++..++ . ++.+++ -|.|.+++.++.++ |++.|-+.+- +++.-
T Consensus 122 ~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~a-GaD~I~v~~g----~G~~~ 196 (351)
T 2c6q_A 122 QLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILS-GADIIKVGIG----PGSVC 196 (351)
T ss_dssp HHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHT-TCSEEEECSS----CSTTB
T ss_pred HHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHh-CCCEEEECCC----CCcCc
Confidence 34444455 99988776543333344455555554 3 787765 68899999999997 9999977431 11100
Q ss_pred cc---cccc-cCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 328 RT---ETFE-VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 328 t~---~Tf~-vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
++ .... +.+....++.+.. ...++++|+.|||.++.|+.++..+||++|.||+.++..
T Consensus 197 ~~r~~~g~~~p~~~~l~~v~~~~-----~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~ 258 (351)
T 2c6q_A 197 TTRKKTGVGYPQLSAVMECADAA-----HGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGH 258 (351)
T ss_dssp CHHHHHCBCCCHHHHHHHHHHHH-----HHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred CccccCCCCccHHHHHHHHHHHH-----hhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcC
Confidence 00 0001 1222223333221 113689999999999999999999999999999999864
No 100
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=98.25 E-value=2.1e-05 Score=76.88 Aligned_cols=163 Identities=23% Similarity=0.321 Sum_probs=111.2
Q ss_pred HHHHHHHHcCCcEEEEEecCCcCCC---CHHHHHHHHhcCCCCcEE------eccccCCHH-------HHHHHHHcCCCE
Q 015424 201 EIARSYEKGGAACLSILTDEKYFKG---SFENLEAVRSAGVKCPLL------CKEFIVDAW-------QIYYARTKGADA 264 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVLTd~~~F~G---s~edL~~Vr~a~v~lPVL------~KDFIid~~-------QI~eAr~~GADa 264 (407)
+-|.+.+++||+.|-.. +.-+.+| |+..++.+|+. +++||. -.||+.++. .|..++++|||+
T Consensus 50 ~~a~~A~~gGAdRIELc-~~l~~GGlTPS~g~i~~a~~~-~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdG 127 (287)
T 3iwp_A 50 ESAVNAERGGADRIELC-SGLSEGGTTPSMGVLQVVKQS-VQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADG 127 (287)
T ss_dssp HHHHHHHHHTCSEEEEC-BCGGGTCBCCCHHHHHHHHTT-CCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCEEEEC-CCCCCCCCCCCHHHHHHHHHh-cCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Confidence 45677788999999987 4556666 88999999986 789986 268999865 567789999999
Q ss_pred EEEec--c--CCCHHHHHHHHHHHHHcCCcE---EEEeCCHHH-HHHHhcccCCcEEEeeccccccccccccccccccCc
Q 015424 265 VLLIA--A--VLPDLDIRYMTKICKLLGLTA---LVEVHDERE-MDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDN 336 (407)
Q Consensus 265 VLLia--a--iL~~~~L~~Li~~a~~LGL~a---LVEVht~eE-lerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl 336 (407)
|.+++ . -++.+.++.|++.+..++++. +=++.|..+ ++..+++ |++-|=.. .+ ..+-.-.+
T Consensus 128 vVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~l-GvdrILTS--------G~--~~~a~~Gl 196 (287)
T 3iwp_A 128 LVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTL-GFERVLTS--------GC--DSSALEGL 196 (287)
T ss_dssp EEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHH-TCSEEEEC--------TT--SSSTTTTH
T ss_pred EEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHc-CCCEEECC--------CC--CCChHHhH
Confidence 99986 2 356677888888877665542 112234433 3555555 66544331 11 12223455
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHH-cCCCEEEE
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQE-AGVKAVLV 383 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~-~GadaVLV 383 (407)
+...+|.+.. ...+.+++-||| +++.+..+.+ .|++.|=.
T Consensus 197 ~~Lk~Lv~~a------~~rI~ImaGGGV-~~~Ni~~l~~~tG~~~~H~ 237 (287)
T 3iwp_A 197 PLIKRLIEQA------KGRIVVMPGGGI-TDRNLQRILEGSGATEFHC 237 (287)
T ss_dssp HHHHHHHHHH------TTSSEEEECTTC-CTTTHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHh------CCCCEEEECCCc-CHHHHHHHHHhhCCCEEeE
Confidence 5666665541 234789999999 7888888876 89987743
No 101
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=98.24 E-value=4.1e-06 Score=84.34 Aligned_cols=145 Identities=17% Similarity=0.181 Sum_probs=92.8
Q ss_pred CHHHHHHHHHHcCCcEEEEEecC----------CcCCCCHHHHHHHHhcCCCCcEEecc--ccCCHHHHHHHHHcCCCEE
Q 015424 198 DPVEIARSYEKGGAACLSILTDE----------KYFKGSFENLEAVRSAGVKCPLLCKE--FIVDAWQIYYARTKGADAV 265 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~----------~~F~Gs~edL~~Vr~a~v~lPVL~KD--FIid~~QI~eAr~~GADaV 265 (407)
...+..++.+..||+++-+..++ .-|.+-.++++.+|+. +++||+.|. |..++.....+..+|||+|
T Consensus 156 ~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~-~~~PVivK~vg~g~s~e~A~~l~~aGad~I 234 (365)
T 3sr7_A 156 PYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKK-LQLPFILKEVGFGMDVKTIQTAIDLGVKTV 234 (365)
T ss_dssp CHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHH-CCSCEEEEECSSCCCHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHh-hCCCEEEEECCCCCCHHHHHHHHHcCCCEE
Confidence 45577888888999988877553 2244455889999987 899999995 2278888888999999999
Q ss_pred EEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhc
Q 015424 266 LLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEG 345 (407)
Q Consensus 266 LLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~ 345 (407)
.+.-. ....+ .. +|...... ... .....+ . +...|..
T Consensus 235 ~V~g~--GGt~~---a~----------ie~~r~~~------~~~-----~~~~g~---------p-------t~~~L~~- 271 (365)
T 3sr7_A 235 DISGR--GGTSF---AY----------IENRRGGN------RSY-----LNQWGQ---------T-------TAQVLLN- 271 (365)
T ss_dssp ECCCB--C---------------------------------CGG-----GTTCSC---------B-------HHHHHHH-
T ss_pred EEeCC--CCccc---ch----------hhcccccc------ccc-----cccccc---------c-------HHHHHHH-
Confidence 98543 22111 00 11100000 000 000011 1 1111211
Q ss_pred ccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 346 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 346 ~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
+.. + ..++++|+.|||.+..|+.++..+|||+|.||++++.
T Consensus 272 v~~--~-~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~ 312 (365)
T 3sr7_A 272 AQP--L-MDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLE 312 (365)
T ss_dssp HGG--G-TTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred HHH--h-cCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 111 1 1368999999999999999999999999999999985
No 102
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.24 E-value=2.2e-06 Score=81.33 Aligned_cols=164 Identities=14% Similarity=0.101 Sum_probs=96.9
Q ss_pred HHHHHHHcCCcEEEEEecCCcCCCCHHH----HHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHH--
Q 015424 202 IARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL-- 275 (407)
Q Consensus 202 iA~ay~~~GA~aISVLTd~~~F~Gs~ed----L~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~-- 275 (407)
..+...++|+++|-|=--.+. +.++ ++.+|+ .++||+- |.-++.|+ ..|||++++- ++|+..
T Consensus 23 ~~~~~~~~GtD~i~vGGs~gv---t~~~~~~~v~~ik~--~~~Pvvl--fp~~~~~v----~~gaD~~l~p-slln~~~~ 90 (228)
T 3vzx_A 23 QLEILCESGTDAVIIGGSDGV---TEDNVLRMMSKVRR--FLVPCVL--EVSAIEAI----VPGFDLYFIP-SVLNSKNA 90 (228)
T ss_dssp HHHHHHTSSCSEEEECCCSCC---CHHHHHHHHHHHTT--SSSCEEE--ECSCGGGC----CSCCSEEEEE-EETTBSSG
T ss_pred HHHHHHHcCCCEEEECCcCCC---CHHHHHHHHHHhhc--cCCCEEE--eCCCHHHc----cccCCEEEEe-eecCCCCc
Confidence 344457899999988311100 1333 344444 6899875 32233333 3699999885 444322
Q ss_pred HH--HHHHHHHHHcCC-----cEEEE----eC--C-------------HHHHHHHhcc---cCCcEEEeecccccccccc
Q 015424 276 DI--RYMTKICKLLGL-----TALVE----VH--D-------------EREMDRVLGI---EGIELIGINNRNLAISIFS 326 (407)
Q Consensus 276 ~L--~~Li~~a~~LGL-----~aLVE----Vh--t-------------~eElerAl~l---~Ga~iIGINnRdL~~~~~~ 326 (407)
++ ....+.++++|+ +++-| +. + .+++...... -|..+|=...
T Consensus 91 ~~i~g~~~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~~~VYld~--------- 161 (228)
T 3vzx_A 91 DWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEY--------- 161 (228)
T ss_dssp GGTTHHHHHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEEC---------
T ss_pred chhhhHHHHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccCCCCHHHHHHHHHHHHHcCCCEEEecC---------
Confidence 21 122355788896 77665 21 1 1333222221 1345553321
Q ss_pred ccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHH
Q 015424 327 YRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGI 397 (407)
Q Consensus 327 ~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i 397 (407)
+..+ .|.+...++.+.. .+++++.+|||+|+|+++++. .|||+|+||+++++.++..+.+
T Consensus 162 -sG~~--~~~~~i~~i~~~~-------~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~p~~~~~~ 221 (228)
T 3vzx_A 162 -SGVL--GDIEAVKKTKAVL-------ETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYEDFDRALKT 221 (228)
T ss_dssp -TTSC--CCHHHHHHHHHHC-------SSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHCHHHHHHH
T ss_pred -CCCc--CCHHHHHHHHHhc-------CCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcCHHHHHHH
Confidence 1111 2666666665531 257899999999999999998 7999999999999975544433
No 103
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.18 E-value=2.3e-05 Score=78.71 Aligned_cols=155 Identities=12% Similarity=0.165 Sum_probs=90.0
Q ss_pred HHHHHhcCCCCcEEeccccCCHHHHH-HHHHcCCCEEEEeccC-----CCH-HHHHHHHHHHHHcCCcEEE-EeCCHHHH
Q 015424 230 LEAVRSAGVKCPLLCKEFIVDAWQIY-YARTKGADAVLLIAAV-----LPD-LDIRYMTKICKLLGLTALV-EVHDEREM 301 (407)
Q Consensus 230 L~~Vr~a~v~lPVL~KDFIid~~QI~-eAr~~GADaVLLiaai-----L~~-~~L~~Li~~a~~LGL~aLV-EVht~eEl 301 (407)
++.++++ .+|++.+=...+..+.. .+..+|+|++.+...- ..+ ..+..+....+..++.+++ -+.+.+++
T Consensus 148 i~~~~~~--g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~ggi~t~e~a 225 (393)
T 2qr6_A 148 IAQVRDS--GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPVIAGGVNDYTTA 225 (393)
T ss_dssp HHHHHHT--TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCEEEECCCSHHHH
T ss_pred HHHHhhc--CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCCEEECCcCCHHHH
Confidence 3444443 45655432222333332 3346799998775321 111 1344455666677888887 68899999
Q ss_pred HHHhcccCCcEEEeecccccccccccccccc-ccCchhHHHHhhcccc--cccccC-CceEEEeeCCCCHHHHHHHHHcC
Q 015424 302 DRVLGIEGIELIGINNRNLAISIFSYRTETF-EVDNSNTKKLLEGERG--EIIRQK-NIIVVGESGLFTPDDIAYVQEAG 377 (407)
Q Consensus 302 erAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf-~vDl~~t~~L~~~~~~--~~i~~~-~v~vVAESGI~t~eD~~~l~~~G 377 (407)
.++.++ |++.|-+.+-. ++.... ... ...+....++.+..+. ..+ .. ++++|+.|||.+.+|+.++..+|
T Consensus 226 ~~~~~~-Gad~i~vg~Gg---~~~~~~-~~~g~~~~~~l~~v~~~~~~~~~~~-~~~~ipvia~GGI~~~~dv~kalalG 299 (393)
T 2qr6_A 226 LHMMRT-GAVGIIVGGGE---NTNSLA-LGMEVSMATAIADVAAARRDYLDET-GGRYVHIIADGSIENSGDVVKAIACG 299 (393)
T ss_dssp HHHHTT-TCSEEEESCCS---CCHHHH-TSCCCCHHHHHHHHHHHHHHHHHHH-TSCCCEEEECSSCCSHHHHHHHHHHT
T ss_pred HHHHHc-CCCEEEECCCc---cccccc-CCCCCChHHHHHHHHHHHHHhHhhc-CCcceEEEEECCCCCHHHHHHHHHcC
Confidence 999997 99998884310 000000 011 1122222222221000 001 11 38999999999999999999999
Q ss_pred CCEEEEcccccCCCC
Q 015424 378 VKAVLVGESIVKQDD 392 (407)
Q Consensus 378 adaVLVGeaLmk~~d 392 (407)
|++|.||++++....
T Consensus 300 A~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 300 ADAVVLGSPLARAEE 314 (393)
T ss_dssp CSEEEECGGGGGSTT
T ss_pred CCEEEECHHHHcCCC
Confidence 999999999865543
No 104
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.14 E-value=4.8e-05 Score=73.46 Aligned_cols=153 Identities=12% Similarity=0.020 Sum_probs=91.7
Q ss_pred CCcEEeccccCCHHH----HHHHHHcCCC-EEEEecc--------CC--CHHHHHHHHHHHHHc-CCcEEEEeC---CHH
Q 015424 239 KCPLLCKEFIVDAWQ----IYYARTKGAD-AVLLIAA--------VL--PDLDIRYMTKICKLL-GLTALVEVH---DER 299 (407)
Q Consensus 239 ~lPVL~KDFIid~~Q----I~eAr~~GAD-aVLLiaa--------iL--~~~~L~~Li~~a~~L-GL~aLVEVh---t~e 299 (407)
+.|+...=+..++.+ +..+..+|+| +|-|... .+ +.+.+.++++..++. ++.++|-+. +.+
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~ 172 (311)
T 1jub_A 93 EGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDLV 172 (311)
T ss_dssp SSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCSHH
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCCCCHH
Confidence 677654322233332 2234578999 8988754 11 445566677766653 666766543 444
Q ss_pred H----HHHHhcccCCcEEEeecccc---ccc---c----------ccccccc-cccCchhHHHHhhcccccccccCCceE
Q 015424 300 E----MDRVLGIEGIELIGINNRNL---AIS---I----------FSYRTET-FEVDNSNTKKLLEGERGEIIRQKNIIV 358 (407)
Q Consensus 300 E----lerAl~l~Ga~iIGINnRdL---~~~---~----------~~~t~~T-f~vDl~~t~~L~~~~~~~~i~~~~v~v 358 (407)
+ ++.+.+. |++.|-+.|+.. ... . .+++... ....++...++.+. + +.++++
T Consensus 173 ~~~~~a~~~~~~-G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~-----~-~~~ipv 245 (311)
T 1jub_A 173 HFDIMAEILNQF-PLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTR-----L-KPEIQI 245 (311)
T ss_dssp HHHHHHHHHTTS-CCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTT-----S-CTTSEE
T ss_pred HHHHHHHHHHHc-CCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHh-----c-CCCCCE
Confidence 4 4555565 999888877631 000 0 0111100 11122333333332 1 236899
Q ss_pred EEeeCCCCHHHHHHHHHcCCCEEEEcccccC-CCChHHHHH
Q 015424 359 VGESGLFTPDDIAYVQEAGVKAVLVGESIVK-QDDPGKGIT 398 (407)
Q Consensus 359 VAESGI~t~eD~~~l~~~GadaVLVGeaLmk-~~dp~~~i~ 398 (407)
|+.|||.|++|+.++..+|||+|.||++++. .++....++
T Consensus 246 i~~GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~~~i~ 286 (311)
T 1jub_A 246 IGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRII 286 (311)
T ss_dssp EEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHHHHHH
Confidence 9999999999999999999999999999996 776554443
No 105
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=98.14 E-value=2.3e-05 Score=78.65 Aligned_cols=167 Identities=13% Similarity=0.146 Sum_probs=98.9
Q ss_pred HHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE--EeccccCCHHHHHHHHHcCCCEEEEeccCCCHHH
Q 015424 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL--LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD 276 (407)
Q Consensus 199 p~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV--L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~ 276 (407)
..++.+..+++|+.+|-+-.|-..++-...|++.= ..+|- -.+.+. ++.. .....+... -..-..++.++
T Consensus 137 ~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~----~~~p~~~~~~~~~-~~~~--~~~~~~~~~-~~~d~~~~w~~ 208 (352)
T 3sgz_A 137 NKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQ----LNLEANILKAALR-ALKE--EKPTQSVPV-LFPKASFCWND 208 (352)
T ss_dssp HHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHH----HHSCHHHHTTCC-------------------CCCTTCCHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcC----CCCCcccchhhhc-cccc--ccccchhhh-hccCCCCCHHH
Confidence 34566777889999998888888777777776431 12221 001110 0000 000001100 01111233344
Q ss_pred HHHHHHHHHHcCCcEE-EEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCC
Q 015424 277 IRYMTKICKLLGLTAL-VEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKN 355 (407)
Q Consensus 277 L~~Li~~a~~LGL~aL-VEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~ 355 (407)
++.+. +..++.++ -++.+.+++.++.++ |++.|-+.|..- ... ..-..+++...++.+. + ..+
T Consensus 209 i~~lr---~~~~~PvivK~v~~~e~A~~a~~~-GaD~I~vsn~GG----~~~--d~~~~~~~~L~~i~~a-----v-~~~ 272 (352)
T 3sgz_A 209 LSLLQ---SITRLPIILKGILTKEDAELAMKH-NVQGIVVSNHGG----RQL--DEVSASIDALREVVAA-----V-KGK 272 (352)
T ss_dssp HHHHH---HHCCSCEEEEEECSHHHHHHHHHT-TCSEEEECCGGG----TSS--CSSCCHHHHHHHHHHH-----H-TTS
T ss_pred HHHHH---HhcCCCEEEEecCcHHHHHHHHHc-CCCEEEEeCCCC----Ccc--CCCccHHHHHHHHHHH-----h-CCC
Confidence 43333 34577764 468899999999997 999999977532 100 1111233333344332 1 236
Q ss_pred ceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 356 IIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 356 v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
+++|+.|||.+.+|+.++..+||++|.||.+++-
T Consensus 273 ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~ 306 (352)
T 3sgz_A 273 IEVYMDGGVRTGTDVLKALALGARCIFLGRPILW 306 (352)
T ss_dssp SEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred CeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 8999999999999999999999999999999885
No 106
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=98.09 E-value=2.3e-05 Score=78.83 Aligned_cols=214 Identities=13% Similarity=0.114 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCh--HHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHH
Q 015424 126 ILEEIVWHKDVEVTQLKQRRPL--SMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIA 203 (407)
Q Consensus 126 iLe~Iv~~K~~ev~~~k~~~pl--~~l~~~~~~~~~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA 203 (407)
-....++..-.++.+.- ..++ .+....+.+..-..+| ..+++.. ....+|+.+--.. +....++..+.
T Consensus 72 ~~~~~in~~la~~a~~~-G~~~~vGs~~~~l~~~~~~~s~-~~vr~~a---p~~~~~anlg~~q-----l~~~~~~~~~~ 141 (368)
T 3vkj_A 72 NELGRINKIIAEVAEKF-GIPMGVGSQRVAIEKAEARESF-AIVRKVA---PTIPIIANLGMPQ-----LVKGYGLKEFQ 141 (368)
T ss_dssp HHHHHHHHHHHHHHHHH-TCCEECCCCHHHHHCGGGSHHH-HHHHHHC---SSSCEEEEEEGGG-----GGTTCCHHHHH
T ss_pred chhhHHHHHHHHHHHHh-CCCeeeecchhccCCHHHHhhH-HHHHHhC---cCcceecCcCeee-----cCCCCCHHHHH
Confidence 34555566556655432 2222 2222222211112344 4455332 2345777663222 22224566665
Q ss_pred HHHH--HcCCcEEEEEec--------CCcCC-CCHHHHHHHHhcCCCCcEEec--cccCCHHHHHHHHHcCCCEEEEecc
Q 015424 204 RSYE--KGGAACLSILTD--------EKYFK-GSFENLEAVRSAGVKCPLLCK--EFIVDAWQIYYARTKGADAVLLIAA 270 (407)
Q Consensus 204 ~ay~--~~GA~aISVLTd--------~~~F~-Gs~edL~~Vr~a~v~lPVL~K--DFIid~~QI~eAr~~GADaVLLiaa 270 (407)
++.+ ++||-.|++++- ..-|. |..++|+.+++. +++||+.| .+.+++.....+..+|||+|.+.-.
T Consensus 142 ~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~-~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~ 220 (368)
T 3vkj_A 142 DAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKE-LSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQ 220 (368)
T ss_dssp HHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTT-CSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCB
T ss_pred HHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCC
Confidence 6554 455556665542 12333 678899999986 89999999 5568999998999999999998544
Q ss_pred CC-CHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhccccc
Q 015424 271 VL-PDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGE 349 (407)
Q Consensus 271 iL-~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~ 349 (407)
-- +..+++.. +.+.-+ .-...+-..+. + .| + .|. ....++...
T Consensus 221 GGt~~~~iE~~----R~~~~~-----~~~~~~~~~~~--~---~g-----~---------pt~----~~l~~v~~~---- 264 (368)
T 3vkj_A 221 GGTNWIAIEMI----RDIRRG-----NWKAESAKNFL--D---WG-----V---------PTA----ASIMEVRYS---- 264 (368)
T ss_dssp TSBCHHHHHHH----HHHHTT-----CTHHHHHHHTT--T---CS-----C---------BHH----HHHHHHHHH----
T ss_pred CCCcccchhhh----hccccc-----ccchhhccccc--c---cc-----c---------cHH----HHHHHHHHH----
Confidence 11 22222211 111000 00000000000 0 00 0 111 111222222
Q ss_pred ccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 350 IIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 350 ~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
+ +++++|+.|||.++.|+.++..+||++|.||..++.
T Consensus 265 -~--~~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~ 301 (368)
T 3vkj_A 265 -V--PDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLK 301 (368)
T ss_dssp -S--TTCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred -c--CCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHH
Confidence 1 257999999999999999999999999999998884
No 107
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=98.05 E-value=6.7e-05 Score=78.50 Aligned_cols=178 Identities=12% Similarity=0.094 Sum_probs=107.0
Q ss_pred HHHHHHHHHH--cCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEe-----ccccCCHHHHHHHHHcCCCEEEEecc-
Q 015424 199 PVEIARSYEK--GGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC-----KEFIVDAWQIYYARTKGADAVLLIAA- 270 (407)
Q Consensus 199 p~~iA~ay~~--~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~-----KDFIid~~QI~eAr~~GADaVLLiaa- 270 (407)
-..+|+++.+ .|+.. ++ ..+-.++++.+...... ..-|.-. +|.-+...-+..|..+|++++.|...
T Consensus 209 e~alaraA~~~~~G~~~--~~--s~~a~~s~e~v~~~~~~-~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~ 283 (511)
T 1kbi_A 209 EKDVARGCGQGVTKVPQ--MI--STLASCSPEEIIEAAPS-DKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDA 283 (511)
T ss_dssp HHHHHHHHHSSSSCCCE--EE--CTTCSSCHHHHHHTCCC-SSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSC
T ss_pred HHHHHHHHHHhCCCeeE--Ee--CCcccCCHHHHHhhcCC-CCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 3478999999 77642 22 22334677776543200 1234332 33222223345567889998766553
Q ss_pred -CCC--H---------------------------------------HHHHHHHHHHH-HcCCcEEE-EeCCHHHHHHHhc
Q 015424 271 -VLP--D---------------------------------------LDIRYMTKICK-LLGLTALV-EVHDEREMDRVLG 306 (407)
Q Consensus 271 -iL~--~---------------------------------------~~L~~Li~~a~-~LGL~aLV-EVht~eElerAl~ 306 (407)
.+. . ..++. ++..+ ..++.++| .+.+.+++.++.+
T Consensus 284 p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~-i~~lr~~~~~PvivKgv~~~e~A~~a~~ 362 (511)
T 1kbi_A 284 PSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKD-IEELKKKTKLPIVIKGVQRTEDVIKAAE 362 (511)
T ss_dssp SSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHH-HHHHHHHCSSCEEEEEECSHHHHHHHHH
T ss_pred CCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHH-HHHHHHHhCCcEEEEeCCCHHHHHHHHH
Confidence 210 0 01222 33333 35887766 6889999999999
Q ss_pred ccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEccc
Q 015424 307 IEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 386 (407)
Q Consensus 307 l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 386 (407)
+ |++.|-+-|..- . .-.....+++...++.+.++...+ ..+++||+.|||.+.+|+.++..+|||+|.||..
T Consensus 363 a-Gad~I~vs~hgG----~--~~d~~~~~~~~l~~v~~~v~~~~~-~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~ 434 (511)
T 1kbi_A 363 I-GVSGVVLSNHGG----R--QLDFSRAPIEVLAETMPILEQRNL-KDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRP 434 (511)
T ss_dssp T-TCSEEEECCTTT----T--SSTTCCCHHHHHHHHHHHHHTTTC-BTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred c-CCCEEEEcCCCC----c--cCCCCCchHHHHHHHHHHHHhhcc-CCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 7 999999966422 0 001111223333344333211001 1368999999999999999999999999999998
Q ss_pred ccCC
Q 015424 387 IVKQ 390 (407)
Q Consensus 387 Lmk~ 390 (407)
++.+
T Consensus 435 ~l~~ 438 (511)
T 1kbi_A 435 FLYA 438 (511)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8864
No 108
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=98.04 E-value=5.3e-05 Score=76.75 Aligned_cols=170 Identities=17% Similarity=0.201 Sum_probs=108.0
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEe-----ccccCCHHHHHHHHHcCCCEEEEecc--C-
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC-----KEFIVDAWQIYYARTKGADAVLLIAA--V- 271 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~-----KDFIid~~QI~eAr~~GADaVLLiaa--i- 271 (407)
..+|++..+.|+ .-+++. +..-+++++.... .+-|+.. +|.-.....+..|..+|++++.+.+. .
T Consensus 114 ~~laraA~~~G~--~~~~s~--~~s~~le~v~~~~---~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~ 186 (392)
T 2nzl_A 114 LATVRACQSLGT--GMMLSS--WATSSIEEVAEAG---PEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYL 186 (392)
T ss_dssp HHHHHHHHHHTC--EEEECT--TCSSCHHHHHHHC---TTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSC
T ss_pred HHHHHHHHHcCC--Ceeccc--hHHHHHHHHHHhc---CCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCc
Confidence 568899999886 344443 2224677664321 2446532 44433444566788899999887431 1
Q ss_pred ----------------C--------------------------------CH-HHHHHHHHHHH-HcCCcEEE-EeCCHHH
Q 015424 272 ----------------L--------------------------------PD-LDIRYMTKICK-LLGLTALV-EVHDERE 300 (407)
Q Consensus 272 ----------------L--------------------------------~~-~~L~~Li~~a~-~LGL~aLV-EVht~eE 300 (407)
+ ++ ..++. ++..+ ..++.++| .+.+.++
T Consensus 187 g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~-i~~lr~~~~~PvivKgv~~~e~ 265 (392)
T 2nzl_A 187 GNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWED-IKWLRRLTSLPIVAKGILRGDD 265 (392)
T ss_dssp CCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHH-HHHHC--CCSCEEEEEECCHHH
T ss_pred cchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHH-HHHHHHhhCCCEEEEecCCHHH
Confidence 0 00 01222 22222 35777777 7899999
Q ss_pred HHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCE
Q 015424 301 MDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKA 380 (407)
Q Consensus 301 lerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gada 380 (407)
+.++.++ |++.|-+-|+.- .+...-..+++...++.+. + ..++++|+.|||.+.+|+.++..+|||+
T Consensus 266 A~~a~~a-Gad~I~vs~~gg------r~~~~g~~~~~~l~~v~~a-----v-~~~ipVia~GGI~~g~Dv~kalalGAd~ 332 (392)
T 2nzl_A 266 AREAVKH-GLNGILVSNHGA------RQLDGVPATIDVLPEIVEA-----V-EGKVEVFLDGGVRKGTDVLKALALGAKA 332 (392)
T ss_dssp HHHHHHT-TCCEEEECCGGG------TSSTTCCCHHHHHHHHHHH-----H-TTSSEEEECSSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHc-CCCEEEeCCCCC------CcCCCCcChHHHHHHHHHH-----c-CCCCEEEEECCCCCHHHHHHHHHhCCCe
Confidence 9999997 999999976532 0001111233333344333 1 2358999999999999999999999999
Q ss_pred EEEcccccCC
Q 015424 381 VLVGESIVKQ 390 (407)
Q Consensus 381 VLVGeaLmk~ 390 (407)
|.||.+++..
T Consensus 333 V~iGr~~l~~ 342 (392)
T 2nzl_A 333 VFVGRPIVWG 342 (392)
T ss_dssp EEECHHHHHH
T ss_pred eEECHHHHHH
Confidence 9999998864
No 109
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.02 E-value=2.1e-05 Score=77.03 Aligned_cols=161 Identities=17% Similarity=0.137 Sum_probs=101.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhc--CCCCcEEe-ccc--c-CC-H---HHHHHHHHcCCCEEE
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLC-KEF--I-VD-A---WQIYYARTKGADAVL 266 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a--~v~lPVL~-KDF--I-id-~---~QI~eAr~~GADaVL 266 (407)
.++.++++...++|+.++.|. +.++..+++. +.+++|-. -+| . .+ . +++.+|...|||.|-
T Consensus 74 ~dI~~lc~eA~~~g~aaVCV~---------P~~V~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEID 144 (288)
T 3oa3_A 74 SQIDVLCAEAKEYGFATVCVR---------PDYVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELD 144 (288)
T ss_dssp HHHHHHHHHHHHHTCSEEEEC---------GGGHHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHhcCCcEEEEC---------HHHHHHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEE
Confidence 356667777888999988883 5577777653 13455542 233 1 11 1 266778899999998
Q ss_pred Eecc--CC-CH------HHHHHHHHHHHHcCCcEEEEeC--CHHHH----HHHhcccCCcEEEeeccccccccccccccc
Q 015424 267 LIAA--VL-PD------LDIRYMTKICKLLGLTALVEVH--DEREM----DRVLGIEGIELIGINNRNLAISIFSYRTET 331 (407)
Q Consensus 267 Liaa--iL-~~------~~L~~Li~~a~~LGL~aLVEVh--t~eEl----erAl~l~Ga~iIGINnRdL~~~~~~~t~~T 331 (407)
+..- .+ +. +++..+.+.|....|.+++|.. +.+|+ +.+.++ |||+|-.. |||+....|
T Consensus 145 mVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~ea-GADfVKTS------TGf~~~GAT 217 (288)
T 3oa3_A 145 MVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLA-GADYVKTS------TGFNGPGAS 217 (288)
T ss_dssp EECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHT-TCSEEECC------CSSSSCCCC
T ss_pred EEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHc-CCCEEEcC------CCCCCCCCC
Confidence 5433 22 21 2333333333333488899975 77774 445565 99999884 334333344
Q ss_pred cccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCE
Q 015424 332 FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKA 380 (407)
Q Consensus 332 f~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gada 380 (407)
++ |.....+.++.. ...+.+.++|||+|.+|+..+.++||+.
T Consensus 218 ~e-dv~lmr~~v~~~------g~~v~VKAAGGIrt~edAl~mi~aGA~R 259 (288)
T 3oa3_A 218 IE-NVSLMSAVCDSL------QSETRVKASGGIRTIEDCVKMVRAGAER 259 (288)
T ss_dssp HH-HHHHHHHHHHHS------SSCCEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HH-HHHHHHHHHHHh------CCCceEEEeCCCCCHHHHHHHHHcCCce
Confidence 43 444444444310 2468999999999999999999999994
No 110
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=97.99 E-value=1.4e-05 Score=80.46 Aligned_cols=101 Identities=24% Similarity=0.230 Sum_probs=76.0
Q ss_pred CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHh
Q 015424 226 SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVL 305 (407)
Q Consensus 226 s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl 305 (407)
+.+.++.+|+. +++||+.|. +.++..+..+..+|||+|.+... -|.
T Consensus 213 ~~~~i~~i~~~-~~~Pv~vkg-v~t~e~a~~a~~aGad~I~vs~~----------------gg~---------------- 258 (380)
T 1p4c_A 213 NWEALRWLRDL-WPHKLLVKG-LLSAEDADRCIAEGADGVILSNH----------------GGR---------------- 258 (380)
T ss_dssp CHHHHHHHHHH-CCSEEEEEE-ECCHHHHHHHHHTTCSEEEECCG----------------GGT----------------
T ss_pred cHHHHHHHHHh-cCCCEEEEe-cCcHHHHHHHHHcCCCEEEEcCC----------------CCC----------------
Confidence 47899999987 899999996 67888899999999999998310 010
Q ss_pred cccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcc
Q 015424 306 GIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGE 385 (407)
Q Consensus 306 ~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGe 385 (407)
.+ .....+++...++.+.+ +.++|+.|||.+.+|+.++..+||++|.||.
T Consensus 259 -------------~~---------d~~~~~~~~l~~v~~~~--------~~pVia~GGI~~~~dv~kal~~GAdaV~iGr 308 (380)
T 1p4c_A 259 -------------QL---------DCAISPMEVLAQSVAKT--------GKPVLIDSGFRRGSDIVKALALGAEAVLLGR 308 (380)
T ss_dssp -------------SC---------TTCCCGGGTHHHHHHHH--------CSCEEECSSCCSHHHHHHHHHTTCSCEEESH
T ss_pred -------------cC---------CCCcCHHHHHHHHHHHc--------CCeEEEECCCCCHHHHHHHHHhCCcHhhehH
Confidence 01 00112344455555431 2389999999999999999999999999999
Q ss_pred cccCC
Q 015424 386 SIVKQ 390 (407)
Q Consensus 386 aLmk~ 390 (407)
+++..
T Consensus 309 ~~l~~ 313 (380)
T 1p4c_A 309 ATLYG 313 (380)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 111
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.99 E-value=7.4e-06 Score=75.22 Aligned_cols=176 Identities=12% Similarity=0.072 Sum_probs=109.2
Q ss_pred CHHHHHHHHHHcCCcEEEEE-ecCCcCCCCHHHHHHHHhc-CCCCcEEe--ccccCCHHH-HHHHHHcCCCEEEEeccCC
Q 015424 198 DPVEIARSYEKGGAACLSIL-TDEKYFKGSFENLEAVRSA-GVKCPLLC--KEFIVDAWQ-IYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVL-Td~~~F~Gs~edL~~Vr~a-~v~lPVL~--KDFIid~~Q-I~eAr~~GADaVLLiaaiL 272 (407)
+..+..+..++.|+..+++= -|+.|..-+++.++.+|+. ++.+++=. -|.+.++.. +..+..+|||+|.+-...-
T Consensus 10 ~l~~~~~~~~~~~~~~~~~kv~~~~f~~~G~~~i~~lr~~~~~~v~~D~kl~DI~~t~~~~v~~~~~~Gad~vtvh~~~g 89 (208)
T 2czd_A 10 EGERAIKIAKSVKDYISMIKVNWPLILGSGVDIIRRLKEETGVEIIADLKLADIPNTNRLIARKVFGAGADYVIVHTFVG 89 (208)
T ss_dssp SHHHHHHHHHHHGGGCSEEEEEHHHHHHHCTTHHHHHHHHHCCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTC
T ss_pred CHHHHHHHHHHhcccccEEEecHHHHHhhCHHHHHHHHHcCCCEEEEEeeeCchHHHHHHHHHHHHhcCCCEEEEeccCC
Confidence 45555566666676655542 3445555566788888875 23333333 365666654 5667899999998876543
Q ss_pred CHHHHHHHHHHHHHc-CCcEEEEeCCHH-------H----HHHHhcccCCcEEEeeccccccccccccccccccCchhHH
Q 015424 273 PDLDIRYMTKICKLL-GLTALVEVHDER-------E----MDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTK 340 (407)
Q Consensus 273 ~~~~L~~Li~~a~~L-GL~aLVEVht~e-------E----lerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~ 340 (407)
..- ++.+++. |+..+.++.+.. . +..+.+. |++.+-+.. ..++...
T Consensus 90 -~~~----i~~~~~~~gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~-G~~G~~~~~----------------~~~~~i~ 147 (208)
T 2czd_A 90 -RDS----VMAVKELGEIIMVVEMSHPGALEFINPLTDRFIEVANEI-EPFGVIAPG----------------TRPERIG 147 (208)
T ss_dssp -HHH----HHHHHTTSEEEEECCCCSGGGGTTTGGGHHHHHHHHHHH-CCSEEECCC----------------SSTHHHH
T ss_pred -HHH----HHHHHHhCCcEEEEecCCcchhhHHHHHHHHHHHHHHHh-CCcEEEECC----------------CChHHHH
Confidence 322 4445555 777777765532 1 2233343 554432211 1123334
Q ss_pred HHhhcccccccccCCceEEEeeCCCCH-HHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 341 KLLEGERGEIIRQKNIIVVGESGLFTP-DDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 341 ~L~~~~~~~~i~~~~v~vVAESGI~t~-eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
++.+. . +.+ +++..|||+.. .++..+.++|+|.++||++|++++||.+.+++|..
T Consensus 148 ~lr~~-----~-~~~-~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a~dp~~~~~~l~~ 203 (208)
T 2czd_A 148 YIRDR-----L-KEG-IKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNAPNPREAAKAIYD 203 (208)
T ss_dssp HHHHH-----S-CTT-CEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred HHHHh-----C-CCC-eEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcCCCHHHHHHHHHH
Confidence 44443 1 223 35699999753 27889999999999999999999999999988754
No 112
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.90 E-value=6.6e-05 Score=77.99 Aligned_cols=188 Identities=10% Similarity=0.045 Sum_probs=82.9
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCC--CHHHHHHHHhcCCCCcEEecc----cc-------CCHHH-HHHHH
Q 015424 193 LREDFDPVEIARSYEKGGAACLSILTDEKYFKG--SFENLEAVRSAGVKCPLLCKE----FI-------VDAWQ-IYYAR 258 (407)
Q Consensus 193 i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~G--s~edL~~Vr~a~v~lPVL~KD----FI-------id~~Q-I~eAr 258 (407)
+.++.+..+.++.+.+.+...+-|+.+.+-+.| +..||...... |.-.+| +. -+.++ +....
T Consensus 176 v~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~----~~~~~d~~~~l~v~a~v~~~~~~e~~~~l~ 251 (503)
T 1me8_A 176 AHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVC----HNELVDSQKRYLVGAGINTRDFRERVPALV 251 (503)
T ss_dssp --------------------------------------------------CCCCBCTTSCBCCEEEECSSSHHHHHHHHH
T ss_pred EcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhc----ccchhccccccccccccCchhHHHHHHHHH
Confidence 445567777888888888888888877666666 33444332211 111122 11 23333 34456
Q ss_pred HcCCCEEEEeccCCCHHHHHHHHHHHHHc--C-CcEEE-EeCCHHHHHHHhcccCCcEEEeecccccccccc-ccccccc
Q 015424 259 TKGADAVLLIAAVLPDLDIRYMTKICKLL--G-LTALV-EVHDEREMDRVLGIEGIELIGINNRNLAISIFS-YRTETFE 333 (407)
Q Consensus 259 ~~GADaVLLiaaiL~~~~L~~Li~~a~~L--G-L~aLV-EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~-~t~~Tf~ 333 (407)
..|++.+.+..+--....+.+.++..++. + +.+++ .+.+.++++.+.++ |+++|-+.+ ++|+. ++...-.
T Consensus 252 e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~a-Gad~I~Vg~----~~g~~~~~r~~~~ 326 (503)
T 1me8_A 252 EAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADA-GADFIKIGI----GGGSICITREQKG 326 (503)
T ss_dssp HHTCSEEEECCSCCCSHHHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHH-TCSEEEECS----SCSTTCCSTTTTC
T ss_pred hhhccceEEecccCcccchhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHh-CCCeEEecc----cCCcCcccccccC
Confidence 77999887755422222233334544543 5 66664 78999999999997 999987732 11111 1111111
Q ss_pred ---cCchhHHHHhhccccc--ccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 334 ---VDNSNTKKLLEGERGE--IIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 334 ---vDl~~t~~L~~~~~~~--~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
+.+....++.+..+.- .. ..++++|+.|||.++.|+.++..+||++|.||+.|+.+
T Consensus 327 ~g~p~~~~l~~v~~~~~~~~~~~-~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~~ 387 (503)
T 1me8_A 327 IGRGQATAVIDVVAERNKYFEET-GIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARF 387 (503)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHH-SEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTB
T ss_pred CCCchHHHHHHHHHHHHHHhhhc-CCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhcc
Confidence 1222222332211000 00 01578999999999999999999999999999999754
No 113
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=97.88 E-value=5.1e-05 Score=73.38 Aligned_cols=162 Identities=14% Similarity=0.072 Sum_probs=96.2
Q ss_pred HHHHHhc--CCCCcEEeccccCCHHHH----HHHHHcCCC---EEEEecc--------CC--CHHHHHHHHHHHHH-cCC
Q 015424 230 LEAVRSA--GVKCPLLCKEFIVDAWQI----YYARTKGAD---AVLLIAA--------VL--PDLDIRYMTKICKL-LGL 289 (407)
Q Consensus 230 L~~Vr~a--~v~lPVL~KDFIid~~QI----~eAr~~GAD---aVLLiaa--------iL--~~~~L~~Li~~a~~-LGL 289 (407)
++.+++. ..+.|+...=+..++.+. ..+..+|+| +|-|... .+ +.+.+.++++..++ .++
T Consensus 82 ~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~ 161 (314)
T 2e6f_A 82 LKYASDLHDYSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGL 161 (314)
T ss_dssp HHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHhhcCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCC
Confidence 4445542 136787643222333322 224567899 8888754 11 34456666766655 477
Q ss_pred cEEEEeC---CHHH----HHHHhcccC-CcEEEeecccc---ccc---c----------ccccccc-cccCchhHHHHhh
Q 015424 290 TALVEVH---DERE----MDRVLGIEG-IELIGINNRNL---AIS---I----------FSYRTET-FEVDNSNTKKLLE 344 (407)
Q Consensus 290 ~aLVEVh---t~eE----lerAl~l~G-a~iIGINnRdL---~~~---~----------~~~t~~T-f~vDl~~t~~L~~ 344 (407)
.++|-+. +.++ ++.+.++ | ++.|-+.|+.. ... . .+++... +...++...++.+
T Consensus 162 Pv~vK~~~~~~~~~~~~~a~~~~~a-G~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~ 240 (314)
T 2e6f_A 162 PFGVKMPPYFDIAHFDTAAAVLNEF-PLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYR 240 (314)
T ss_dssp CEEEEECCCCCHHHHHHHHHHHHTC-TTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHhc-CCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHH
Confidence 7776554 4455 5555675 8 99888777541 000 0 0111000 0111223333332
Q ss_pred cccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC-CCChHHHHHh
Q 015424 345 GERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK-QDDPGKGITG 399 (407)
Q Consensus 345 ~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk-~~dp~~~i~~ 399 (407)
. + .++++|+.|||+|++|+.++..+|||+|-||++++. .++..+.+++
T Consensus 241 ~-----~--~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~~~p~~~~~i~~ 289 (314)
T 2e6f_A 241 R-----C--PDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQEEGPGIFTRLED 289 (314)
T ss_dssp H-----C--TTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHHHCTTHHHHHHH
T ss_pred h-----c--CCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHhcCcHHHHHHHH
Confidence 2 2 368999999999999999999999999999999995 8876655543
No 114
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=97.83 E-value=0.00078 Score=65.83 Aligned_cols=132 Identities=14% Similarity=0.056 Sum_probs=81.3
Q ss_pred cCCCEEEEeccC--------C-CHHHHHHHHHHHHHc----------CCcEEEEeCC---HHH----HHHHhcccCCcEE
Q 015424 260 KGADAVLLIAAV--------L-PDLDIRYMTKICKLL----------GLTALVEVHD---ERE----MDRVLGIEGIELI 313 (407)
Q Consensus 260 ~GADaVLLiaai--------L-~~~~L~~Li~~a~~L----------GL~aLVEVht---~eE----lerAl~l~Ga~iI 313 (407)
.|+|+|-+.... + ....+.++++..++. ++.++|-++. .+| ++.+.+. |++.|
T Consensus 164 ~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~-Gvd~i 242 (336)
T 1f76_A 164 AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRH-NIDGV 242 (336)
T ss_dssp GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHT-TCSEE
T ss_pred ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHc-CCcEE
Confidence 489999886531 1 223344555555442 6888887762 233 4566665 99999
Q ss_pred Eeecccccccc----------ccccccc-cccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEE
Q 015424 314 GINNRNLAISI----------FSYRTET-FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVL 382 (407)
Q Consensus 314 GINnRdL~~~~----------~~~t~~T-f~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVL 382 (407)
-+.|+...... .+++... ....+....++.+. + +.++++|+.|||.|++|+.++..+|||+|-
T Consensus 243 ~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~-----~-~~~ipVi~~GGI~~~~da~~~l~~GAd~V~ 316 (336)
T 1f76_A 243 IATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLE-----L-NGRLPIIGVGGIDSVIAAREKIAAGASLVQ 316 (336)
T ss_dssp EECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHH-----H-TTSSCEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred EEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHH-----h-CCCCCEEEECCCCCHHHHHHHHHCCCCEEE
Confidence 98876320000 0000000 00111222233332 1 236899999999999999999999999999
Q ss_pred EcccccC-CCChHHHHH
Q 015424 383 VGESIVK-QDDPGKGIT 398 (407)
Q Consensus 383 VGeaLmk-~~dp~~~i~ 398 (407)
||++++. .++....++
T Consensus 317 igr~~l~~~P~~~~~i~ 333 (336)
T 1f76_A 317 IYSGFIFKGPPLIKEIV 333 (336)
T ss_dssp ESHHHHHHCHHHHHHHH
T ss_pred eeHHHHhcCcHHHHHHH
Confidence 9999886 677666554
No 115
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.81 E-value=6.5e-05 Score=72.63 Aligned_cols=117 Identities=16% Similarity=0.248 Sum_probs=79.8
Q ss_pred HHHHHHHHcCCC--------EEEEecc---CCCHHHHHHHHHHHHHc-C--CcEEEEeCCHHHHHHHhcccCCcEEEeec
Q 015424 252 WQIYYARTKGAD--------AVLLIAA---VLPDLDIRYMTKICKLL-G--LTALVEVHDEREMDRVLGIEGIELIGINN 317 (407)
Q Consensus 252 ~QI~eAr~~GAD--------aVLLiaa---iL~~~~L~~Li~~a~~L-G--L~aLVEVht~eElerAl~l~Ga~iIGINn 317 (407)
++-|.++.-|++ .|++-.. ...+ ..+-++.+++. + +.+.+||+|.+|+..+++. |+++|++-|
T Consensus 134 ~~~~A~~~gG~~~hr~~l~d~vlik~~Hi~~~g~--~~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~a-GaD~I~ld~ 210 (273)
T 2b7n_A 134 FEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKD--LKSFLTHARKNLPFTAKIEIECESFEEAKNAMNA-GADIVMCDN 210 (273)
T ss_dssp HHHHHHHTTTCCCCCSSTTTCEEECHHHHTTCSS--HHHHHHHHGGGSCTTCCEEEEESSHHHHHHHHHH-TCSEEEEET
T ss_pred HHHHHHHhCCCcceEcCccceEEeeCCHHHHhCC--HHHHHHHHHHhCCCCceEEEEcCCHHHHHHHHHc-CCCEEEECC
Confidence 455666777855 6663211 1111 13344555553 3 5789999999999999997 999999865
Q ss_pred cccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015424 318 RNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 391 (407)
Q Consensus 318 RdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 391 (407)
-++ +...++.+.+.+ .+ +++.+++.||| +++++..+.++|+|++-||+.++..+
T Consensus 211 ~~~----------------~~l~~~v~~l~~-~~--~~~~i~AsGGI-~~~ni~~~~~aGaD~i~vGs~i~~a~ 264 (273)
T 2b7n_A 211 LSV----------------LETKEIAAYRDA-HY--PFVLLEASGNI-SLESINAYAKSGVDAISVGALIHQAT 264 (273)
T ss_dssp CCH----------------HHHHHHHHHHHH-HC--TTCEEEEESSC-CTTTHHHHHTTTCSEEECTHHHHTCC
T ss_pred CCH----------------HHHHHHHHHhhc-cC--CCcEEEEECCC-CHHHHHHHHHcCCcEEEEcHHhcCCC
Confidence 332 333333333221 12 35799999999 99999999999999999999988654
No 116
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=97.80 E-value=0.00066 Score=67.30 Aligned_cols=152 Identities=18% Similarity=0.170 Sum_probs=97.5
Q ss_pred HHHHHHHHcCCcEEEEEec----------------CCcCCCCHHH--------HHHHHhcCCCCcEEec----cccCCHH
Q 015424 201 EIARSYEKGGAACLSILTD----------------EKYFKGSFEN--------LEAVRSAGVKCPLLCK----EFIVDAW 252 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVLTd----------------~~~F~Gs~ed--------L~~Vr~a~v~lPVL~K----DFIid~~ 252 (407)
+-|+...++|+++|=+..- ..-|+||+++ ++.||++ ++.||..| ||. +
T Consensus 148 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~-v~~pv~vRls~~~~~-~-- 223 (340)
T 3gr7_A 148 NGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREV-WDGPLFVRISASDYH-P-- 223 (340)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH-CCSCEEEEEESCCCS-T--
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHh-cCCceEEEecccccc-C--
Confidence 3344557789999988733 1346888865 4566776 68898754 221 0
Q ss_pred HHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeecccccccccccccccc
Q 015424 253 QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETF 332 (407)
Q Consensus 253 QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf 332 (407)
| -.+.++..++.+...+.|++ +++||+-. ..... .. ...
T Consensus 224 --------~---------g~~~~~~~~la~~L~~~Gvd-~i~vs~g~-------~~~~~-------~~---------~~~ 262 (340)
T 3gr7_A 224 --------D---------GLTAKDYVPYAKRMKEQGVD-LVDVSSGA-------IVPAR-------MN---------VYP 262 (340)
T ss_dssp --------T---------SCCGGGHHHHHHHHHHTTCC-EEEEECCC-------SSCCC-------CC---------CCT
T ss_pred --------C---------CCCHHHHHHHHHHHHHcCCC-EEEEecCC-------ccCCC-------CC---------CCc
Confidence 1 12344566666666666765 34444310 00000 00 001
Q ss_pred ccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHhhhcCcc
Q 015424 333 EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITGLFGKDI 405 (407)
Q Consensus 333 ~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~L~~~~~ 405 (407)
..+++...++.+. -++++|+.|||++++++.++.+.| ||.|.+|.+++..+|....+++-++.++
T Consensus 263 ~~~~~~~~~ik~~--------~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l~~~~ 328 (340)
T 3gr7_A 263 GYQVPFAELIRRE--------ADIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAARELGAKI 328 (340)
T ss_dssp TTTHHHHHHHHHH--------TTCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTTCCC
T ss_pred cccHHHHHHHHHH--------cCCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHCCCCC
Confidence 1234445555543 257899999999999999999999 9999999999999999998888777543
No 117
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=97.77 E-value=0.00015 Score=72.05 Aligned_cols=151 Identities=12% Similarity=0.164 Sum_probs=97.7
Q ss_pred CCcEEeccccCCHHHHHH----HHHcCCCEEEEecc--------------CC-CHHHHHHHHHHHHH-cCCcEEEEeC--
Q 015424 239 KCPLLCKEFIVDAWQIYY----ARTKGADAVLLIAA--------------VL-PDLDIRYMTKICKL-LGLTALVEVH-- 296 (407)
Q Consensus 239 ~lPVL~KDFIid~~QI~e----Ar~~GADaVLLiaa--------------iL-~~~~L~~Li~~a~~-LGL~aLVEVh-- 296 (407)
+.|+...=+..++.+..+ +..+|+|+|-|... ++ ....+.++++..++ .++.+.+-++
T Consensus 57 ~~p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g 136 (350)
T 3b0p_A 57 EHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLG 136 (350)
T ss_dssp GCSEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESC
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecC
Confidence 456654444456655443 34679999999863 22 33456666666655 5777776332
Q ss_pred -----C----HHHHHHHhcccCCcEEEeecccccccccccccc----ccccCchhHHHHhhcccccccccCCceEEEeeC
Q 015424 297 -----D----EREMDRVLGIEGIELIGINNRNLAISIFSYRTE----TFEVDNSNTKKLLEGERGEIIRQKNIIVVGESG 363 (407)
Q Consensus 297 -----t----~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~----Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESG 363 (407)
+ .+.++.+.+. |++.|-|..|...+ +|+.. ....+++...++.+. + .++++|+-||
T Consensus 137 ~~~~~~~~~~~~~a~~l~~a-G~d~I~V~~r~~~~---g~~g~~~~~~~~~~~~~i~~ik~~-----~--~~iPVianGg 205 (350)
T 3b0p_A 137 LEGKETYRGLAQSVEAMAEA-GVKVFVVHARSALL---ALSTKANREIPPLRHDWVHRLKGD-----F--PQLTFVTNGG 205 (350)
T ss_dssp BTTCCCHHHHHHHHHHHHHT-TCCEEEEECSCBC-------------CCCCCHHHHHHHHHH-----C--TTSEEEEESS
T ss_pred cCccccHHHHHHHHHHHHHc-CCCEEEEecCchhc---ccCcccccCCCcccHHHHHHHHHh-----C--CCCeEEEECC
Confidence 2 2334555665 99999998775311 22211 112355556666543 1 2689999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhh
Q 015424 364 LFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLF 401 (407)
Q Consensus 364 I~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~ 401 (407)
|.|++|+.++.+ |||+|.||.+++..++....+.+.+
T Consensus 206 I~s~eda~~~l~-GaD~V~iGRa~l~~P~l~~~i~~~l 242 (350)
T 3b0p_A 206 IRSLEEALFHLK-RVDGVMLGRAVYEDPFVLEEADRRV 242 (350)
T ss_dssp CCSHHHHHHHHT-TSSEEEECHHHHHCGGGGTTHHHHT
T ss_pred cCCHHHHHHHHh-CCCEEEECHHHHhCcHHHHHHHHHh
Confidence 999999999998 9999999999999888776665443
No 118
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=97.77 E-value=0.00065 Score=63.44 Aligned_cols=161 Identities=16% Similarity=0.128 Sum_probs=94.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCC-CCcEEec-cc--cC-----CHHHHHHHHHcCCCEEE
Q 015424 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCK-EF--IV-----DAWQIYYARTKGADAVL 266 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v-~lPVL~K-DF--Ii-----d~~QI~eAr~~GADaVL 266 (407)
+.++.++++...++|+.++.|. +..+..+++. . ++++... +| .. ...++.+|...|||.|-
T Consensus 19 ~~~i~~l~~~a~~~g~~~v~v~---------~~~v~~~~~~-l~~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~Id 88 (225)
T 1mzh_A 19 EKEIEEFVLKSEELGIYAVCVN---------PYHVKLASSI-AKKVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQELD 88 (225)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEC---------GGGHHHHHHH-CSSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHhCCeEEEEC---------HHHHHHHHHH-hcCCceeeEecCCCCccchhhhHHHHHHHHHcCCCEEE
Confidence 3456667777778999888763 4456665543 2 4455422 23 11 12345578889999998
Q ss_pred E--eccCC---CHHHHHHHHHHHHH-cCCcEEEEe------CCHHH----HHHHhcccCCcEEEeecccccccccccccc
Q 015424 267 L--IAAVL---PDLDIRYMTKICKL-LGLTALVEV------HDERE----MDRVLGIEGIELIGINNRNLAISIFSYRTE 330 (407)
Q Consensus 267 L--iaaiL---~~~~L~~Li~~a~~-LGL~aLVEV------ht~eE----lerAl~l~Ga~iIGINnRdL~~~~~~~t~~ 330 (407)
+ ....+ ..+.+.+.++..++ .+ .+++-+ -|.++ ++.+.++ |+++|-+|. .+ .
T Consensus 89 ~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~ea-Gad~I~tst-g~---------~ 156 (225)
T 1mzh_A 89 IVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEA-GADFIKTST-GF---------A 156 (225)
T ss_dssp EECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHH-TCSEEECCC-SC---------S
T ss_pred EEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHh-CCCEEEECC-CC---------C
Confidence 4 33332 22333333443333 33 344444 34444 3455565 999994432 22 1
Q ss_pred ccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEccc
Q 015424 331 TFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 386 (407)
Q Consensus 331 Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 386 (407)
+-..+++....+.+.+ +.++++++.|||+|++|+.++.++||+ +||.+
T Consensus 157 ~gga~~~~i~~v~~~v------~~~ipVia~GGI~t~~da~~~l~aGA~--~iG~s 204 (225)
T 1mzh_A 157 PRGTTLEEVRLIKSSA------KGRIKVKASGGIRDLETAISMIEAGAD--RIGTS 204 (225)
T ss_dssp SSCCCHHHHHHHHHHH------TTSSEEEEESSCCSHHHHHHHHHTTCS--EEEES
T ss_pred CCCCCHHHHHHHHHHh------CCCCcEEEECCCCCHHHHHHHHHhCch--HHHHc
Confidence 1123444444444431 236899999999999999999999999 45655
No 119
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.77 E-value=6e-05 Score=73.88 Aligned_cols=114 Identities=15% Similarity=0.158 Sum_probs=79.3
Q ss_pred HHHHHHHHcCCC--------EEEEeccCCCHHHHH------HHHHHHHH-cC--CcEEEEeCCHHHHHHHhcccCCcEEE
Q 015424 252 WQIYYARTKGAD--------AVLLIAAVLPDLDIR------YMTKICKL-LG--LTALVEVHDEREMDRVLGIEGIELIG 314 (407)
Q Consensus 252 ~QI~eAr~~GAD--------aVLLiaaiL~~~~L~------~Li~~a~~-LG--L~aLVEVht~eElerAl~l~Ga~iIG 314 (407)
++-|.++.-|++ .|++ .+..+. +-++.+++ .+ +.+.+||+|.+|+..+++. |+++|+
T Consensus 149 ~e~~A~~~GG~~~hr~~l~d~vli-----k~~Hi~~~g~~~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~a-GaD~I~ 222 (299)
T 2jbm_A 149 VEKYGLLVGGAASHRYDLGGLVMV-----KDNHVVAAGGVEKAVRAARQAADFALKVEVECSSLQEAVQAAEA-GADLVL 222 (299)
T ss_dssp HHHHHHHHTTCBCCCCSTTSSEEE-----CHHHHHHHTSHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHT-TCSEEE
T ss_pred HHHHHHHHCCCCceecCccceEEe-----cccHHHHcCCHHHHHHHHHHhCCcCCeEEEecCCHHHHHHHHHc-CCCEEE
Confidence 455667778987 5653 232222 22333333 33 6789999999999999997 999999
Q ss_pred eeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015424 315 INNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 391 (407)
Q Consensus 315 INnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 391 (407)
+.|-++ +...++.+.+.+ .. +++.+++.||| |++++..+.++|+|++-||+.+...+
T Consensus 223 ld~~~~----------------~~l~~~v~~l~~-~~--~~~~I~ASGGI-t~~ni~~~~~aGaD~i~vGs~i~~a~ 279 (299)
T 2jbm_A 223 LDNFKP----------------EELHPTATVLKA-QF--PSVAVEASGGI-TLDNLPQFCGPHIDVISMGMLTQAAP 279 (299)
T ss_dssp EESCCH----------------HHHHHHHHHHHH-HC--TTSEEEEESSC-CTTTHHHHCCTTCCEEECTHHHHSCC
T ss_pred ECCCCH----------------HHHHHHHHHhhc-cC--CCeeEEEECCC-CHHHHHHHHHCCCCEEEEChhhcCCC
Confidence 965333 333333333211 11 35789999999 99999999999999999999877654
No 120
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=97.75 E-value=0.00027 Score=69.37 Aligned_cols=178 Identities=15% Similarity=0.148 Sum_probs=103.7
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcC---CCCHHHHHHHHhcCCCCcEEec---c--ccCCHHHHHHH-HHcCCCEEEEecc
Q 015424 200 VEIARSYEKGGAACLSILTDEKYF---KGSFENLEAVRSAGVKCPLLCK---E--FIVDAWQIYYA-RTKGADAVLLIAA 270 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F---~Gs~edL~~Vr~a~v~lPVL~K---D--FIid~~QI~eA-r~~GADaVLLiaa 270 (407)
..+|+++.+.|+. .++++-... .+....++ +|...++.|++.. + +-.++..+.++ ...|+|++.+...
T Consensus 78 ~~la~~a~~~G~~--~~~~~~~~~le~~~~~~~~q-l~~~~~d~pv~~~~~~~q~~~~~~~~~~~a~~~~~~~a~~i~~n 154 (332)
T 1vcf_A 78 LALAEAAEALGVG--MMLGSGRILLERPEALRSFR-VRKVAPKALLIANLGLAQLRRYGRDDLLRLVEMLEADALAFHVN 154 (332)
T ss_dssp HHHHHHHHHHTCE--EEEEECHHHHHCTTTHHHHC-CTTTCSSSCEEEEEEGGGGGTCCHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHHcCCC--EEeCCchhcccCCCccceEE-eeccCCCceeecccChhhhhccChHHHHHHHhhcCCCceeeccc
Confidence 3678888888853 333322100 01112221 3432368898721 1 22455555554 4568998765432
Q ss_pred CC------CHHH---HHHHHHHHHHcCCcEEEE-e---CCHHHHHHHhcccCCcEEEeecccccccccc---ccc-----
Q 015424 271 VL------PDLD---IRYMTKICKLLGLTALVE-V---HDEREMDRVLGIEGIELIGINNRNLAISIFS---YRT----- 329 (407)
Q Consensus 271 iL------~~~~---L~~Li~~a~~LGL~aLVE-V---ht~eElerAl~l~Ga~iIGINnRdL~~~~~~---~t~----- 329 (407)
.. .+.+ +.+.++..++.++.++|- + .+.+++.++.++ |++.|-+.|..- .++.. ++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~i~~vr~~~~Pv~vK~v~~g~~~e~a~~~~~~-G~d~I~vs~~gg-t~~~~~~~~r~~~~~~ 232 (332)
T 1vcf_A 155 PLQEAVQRGDTDFRGLVERLAELLPLPFPVMVKEVGHGLSREAALALRDL-PLAAVDVAGAGG-TSWARVEEWVRFGEVR 232 (332)
T ss_dssp HHHHHHTTSCCCCTTHHHHHHHHCSCSSCEEEECSSSCCCHHHHHHHTTS-CCSEEECCCBTS-CCHHHHHHTC------
T ss_pred hHHHHhcCCCccHHHHHHHHHHHHcCCCCEEEEecCCCCCHHHHHHHHHc-CCCEEEeCCCCC-CcchhHHHhhccccch
Confidence 10 1111 234445444478888987 8 899999999997 999998865421 00000 000
Q ss_pred ----cccc-cCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 330 ----ETFE-VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 330 ----~Tf~-vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
.+.. ..++...++.+. + .++++|+.|||.+++|+.++..+|||+|.||.+++.
T Consensus 233 ~~~~~~~g~~~~~~l~~v~~~-----~--~~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~ 290 (332)
T 1vcf_A 233 HPELCEIGIPTARAILEVREV-----L--PHLPLVASGGVYTGTDGAKALALGADLLAVARPLLR 290 (332)
T ss_dssp --CCTTCSCBHHHHHHHHHHH-----C--SSSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHH
T ss_pred hhhHhhccccHHHHHHHHHHh-----c--CCCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHH
Confidence 0000 111222233222 1 258999999999999999999999999999999995
No 121
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=97.75 E-value=0.00089 Score=65.98 Aligned_cols=153 Identities=14% Similarity=0.155 Sum_probs=96.2
Q ss_pred HHHHHHHHHcCCcEEEEEec----------------CCcCCCCH--------HHHHHHHhcCCCCcEEec----cccCCH
Q 015424 200 VEIARSYEKGGAACLSILTD----------------EKYFKGSF--------ENLEAVRSAGVKCPLLCK----EFIVDA 251 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd----------------~~~F~Gs~--------edL~~Vr~a~v~lPVL~K----DFIid~ 251 (407)
.+-|+.+.++|+++|=+..- ..-++||+ +-++.||++ ++.||..| |+.-
T Consensus 147 ~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~-v~~pv~vris~~~~~~-- 223 (338)
T 1z41_A 147 KQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQV-WDGPLFVRVSASDYTD-- 223 (338)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH-CCSCEEEEEECCCCST--
T ss_pred HHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHH-cCCcEEEEecCcccCC--
Confidence 44566668899999987642 12367886 445667776 68898765 2211
Q ss_pred HHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccc
Q 015424 252 WQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTET 331 (407)
Q Consensus 252 ~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~T 331 (407)
| -++.++..++.+.+.+.|++. ++||+ +..... .++ ..
T Consensus 224 ---------~---------g~~~~~~~~~a~~l~~~Gvd~-i~v~~--------------------~~~~~~--~~~-~~ 261 (338)
T 1z41_A 224 ---------K---------GLDIADHIGFAKWMKEQGVDL-IDCSS--------------------GALVHA--DIN-VF 261 (338)
T ss_dssp ---------T---------SCCHHHHHHHHHHHHHTTCCE-EEEEC--------------------CCSSCC--CCC-CC
T ss_pred ---------C---------CCCHHHHHHHHHHHHHcCCCE-EEEec--------------------CccccC--CCC-CC
Confidence 1 123344555555555555543 23332 111000 000 00
Q ss_pred cccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHhhhcCcc
Q 015424 332 FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITGLFGKDI 405 (407)
Q Consensus 332 f~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~L~~~~~ 405 (407)
...+++...++.+. -++++++-|||.|++++.++.+.| ||.|.+|.+++..+|....+++-++.++
T Consensus 262 ~~~~~~~~~~ir~~--------~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~~~~~~i 328 (338)
T 1z41_A 262 PGYQVSFAEKIREQ--------ADMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAAKQLNTEI 328 (338)
T ss_dssp TTTTHHHHHHHHHH--------HCCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTTCCC
T ss_pred ccchHHHHHHHHHH--------CCCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHHcCCCccc
Confidence 01234445555443 257999999999999999999999 9999999999999999988887666554
No 122
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=97.73 E-value=0.00016 Score=68.98 Aligned_cols=157 Identities=17% Similarity=0.157 Sum_probs=98.4
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhc--CCCCcEEe-ccc--cC-C----HHHHHHHHHcCCCEEEE
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLC-KEF--IV-D----AWQIYYARTKGADAVLL 267 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a--~v~lPVL~-KDF--Ii-d----~~QI~eAr~~GADaVLL 267 (407)
++.+++....++|+.++-|. +..+..+++. +.++.|-. =+| .- + -+++.+|...|||.|-+
T Consensus 44 ~i~~lc~eA~~~~~~aVcV~---------p~~v~~a~~~L~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDm 114 (239)
T 3ngj_A 44 QIRKLCSEAAEYKFASVCVN---------PTWVPLCAELLKGTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEEVDM 114 (239)
T ss_dssp HHHHHHHHHHHHTCSEEEEC---------GGGHHHHHHHHTTSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHhcCCcEEEEC---------HHHHHHHHHHhCCCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCEEEE
Confidence 56666777788899888873 4556655532 23444321 234 11 1 13677788999999876
Q ss_pred eccC---CC---H---HHHHHHHHHHHHcCCcEEEEeC--CHHHHHHH----hcccCCcEEEeecccccccccccccccc
Q 015424 268 IAAV---LP---D---LDIRYMTKICKLLGLTALVEVH--DEREMDRV----LGIEGIELIGINNRNLAISIFSYRTETF 332 (407)
Q Consensus 268 iaai---L~---~---~~L~~Li~~a~~LGL~aLVEVh--t~eElerA----l~l~Ga~iIGINnRdL~~~~~~~t~~Tf 332 (407)
..-+ ++ + +++..+.+.|...-+.+++|+. |.+|+.++ .++ |+++|=+. |||+....|+
T Consensus 115 ViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~a-GADfVKTS------TGf~~ggAt~ 187 (239)
T 3ngj_A 115 VINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAA-GAEYVKTS------TGFGTHGATP 187 (239)
T ss_dssp ECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHH-TCSEEECC------CSSSSCCCCH
T ss_pred EeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHH-CcCEEECC------CCCCCCCCCH
Confidence 5442 22 1 2333444444333378888987 77888877 665 99988763 3444334444
Q ss_pred ccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCE
Q 015424 333 EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKA 380 (407)
Q Consensus 333 ~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gada 380 (407)
+ |.....+.. ...+.+.+.|||+|.+|+..+.++||+.
T Consensus 188 ~-dv~lmr~~v---------g~~v~VKasGGIrt~~da~~~i~aGA~r 225 (239)
T 3ngj_A 188 E-DVKLMKDTV---------GDKALVKAAGGIRTFDDAMKMINNGASR 225 (239)
T ss_dssp H-HHHHHHHHH---------GGGSEEEEESSCCSHHHHHHHHHTTEEE
T ss_pred H-HHHHHHHhh---------CCCceEEEeCCCCCHHHHHHHHHhcccc
Confidence 2 333333322 2467899999999999999999999984
No 123
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.71 E-value=7.1e-05 Score=77.25 Aligned_cols=134 Identities=16% Similarity=0.221 Sum_probs=90.9
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHH
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRY 279 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~ 279 (407)
.+.+..+.+.|++++-|-|..++|.+-++.++.+++. .++||+.|+.. ++.....+. |||+|-+..-.=+.. .
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~l~~~-~~vpvi~k~v~-~~~~a~~l~--G~d~v~vg~g~g~~~-~-- 302 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQK-VDADFIVGNIA-NPKAVDDLT--FADAVKVGIGPGSIC-T-- 302 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHT-CCSEEEEEEEC-CHHHHTTCT--TSSEEEECSSCSTTB-C--
T ss_pred HHHHHHHHHhcCCceEEEecCCcEeehhhHHHHHHHH-hCCccccCCcC-CHHHHHHhh--CCCeEEEeeeeccce-e--
Confidence 6778889999999987777677888888889999986 79999999965 555443333 999999832111100 0
Q ss_pred HHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEE
Q 015424 280 MTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVV 359 (407)
Q Consensus 280 Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vV 359 (407)
. ++. . |. |+ .+. ..+....++... .++++|
T Consensus 303 --~--------------------r~~-~-~~---g~--------------~~~-~~l~~~~~~~~~--------~~vpVi 332 (486)
T 2cu0_A 303 --T--------------------RIV-A-GV---GV--------------PQI-TAVAMVADRAQE--------YGLYVI 332 (486)
T ss_dssp --H--------------------HHH-T-CC---CC--------------CHH-HHHHHHHHHHHH--------HTCEEE
T ss_pred --e--------------------eEE-e-ec---Cc--------------chH-HHHHHHHHHHHH--------cCCcEE
Confidence 0 000 1 11 11 111 011122223222 257999
Q ss_pred EeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 360 GESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 360 AESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
+.|||.+..|+.++..+||++|.+|+.++..
T Consensus 333 a~GGi~~~~di~kalalGA~~v~~g~~~~~~ 363 (486)
T 2cu0_A 333 ADGGIRYSGDIVKAIAAGADAVMLGNLLAGT 363 (486)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred ecCCCCCHHHHHHHHHcCCCceeeChhhhcC
Confidence 9999999999999999999999999999965
No 124
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=97.70 E-value=6e-05 Score=73.73 Aligned_cols=123 Identities=18% Similarity=0.155 Sum_probs=70.9
Q ss_pred eccc-cCCHHHHHHHHHcCCC--------EEEEeccCCCHHHHH------HHHHHHHH-cC--CcEEEEeCCHHHHHHHh
Q 015424 244 CKEF-IVDAWQIYYARTKGAD--------AVLLIAAVLPDLDIR------YMTKICKL-LG--LTALVEVHDEREMDRVL 305 (407)
Q Consensus 244 ~KDF-Iid~~QI~eAr~~GAD--------aVLLiaaiL~~~~L~------~Li~~a~~-LG--L~aLVEVht~eElerAl 305 (407)
||.. ..-.++-|.++.-|++ .|++ .+..+. +-++.+++ ++ +.+.+||+|.+|+..++
T Consensus 142 Rkt~p~~r~~e~~A~~~GG~~~hr~~l~d~vli-----k~nh~~~~g~i~~ai~~~r~~~~~~~~i~vev~tlee~~~A~ 216 (294)
T 3c2e_A 142 RKTTPGLRRLEKYSMLVGGCDTHRYDLSSMVML-----KDNHIWATGSITNAVKNARAVCGFAVKIEVECLSEDEATEAI 216 (294)
T ss_dssp SCCCTTCHHHHHHHHHHTTCBCCCCSTTTSEEE-----CHHHHHHHSSHHHHHHHHHHHHCTTSCEEEECSSSHHHHHHH
T ss_pred CCCChhHHHHHHHHHHhCCCCceecCccceEEe-----ecchhhhcCCHHHHHHHHHHhcCcCCeEEEecCCHHHHHHHH
Confidence 4553 1223456667788887 5552 232222 22333333 33 67899999999999999
Q ss_pred cccCCcEEEeeccccccccccccccccccCchhHHHHhhccccc--ccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEE
Q 015424 306 GIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGE--IIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLV 383 (407)
Q Consensus 306 ~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~--~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLV 383 (407)
+. |+++|++.|-++ +...++.+.+.+. .+ +++.+++.||| |++++..+.++|+|++-|
T Consensus 217 ~a-GaD~I~ld~~~~----------------~~l~~~v~~l~~~~~g~--~~v~I~ASGGI-t~~ni~~~~~~GvD~i~v 276 (294)
T 3c2e_A 217 EA-GADVIMLDNFKG----------------DGLKMCAQSLKNKWNGK--KHFLLECSGGL-NLDNLEEYLCDDIDIYST 276 (294)
T ss_dssp HH-TCSEEECCC---------------------------------------CCEEEEECCC-CC------CCCSCSEEEC
T ss_pred Hc-CCCEEEECCCCH----------------HHHHHHHHHhcccccCC--CCeEEEEECCC-CHHHHHHHHHcCCCEEEE
Confidence 97 999999865433 2223333322110 01 23789999999 999999999999999999
Q ss_pred cccccCCC
Q 015424 384 GESIVKQD 391 (407)
Q Consensus 384 GeaLmk~~ 391 (407)
|+.+...+
T Consensus 277 Gs~i~~a~ 284 (294)
T 3c2e_A 277 SSIHQGTP 284 (294)
T ss_dssp GGGTSSCC
T ss_pred echhcCCC
Confidence 99987654
No 125
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=97.68 E-value=5.7e-05 Score=73.80 Aligned_cols=94 Identities=14% Similarity=0.184 Sum_probs=71.5
Q ss_pred HHHHHHHHHHcC---CcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhccccccccc
Q 015424 277 IRYMTKICKLLG---LTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQ 353 (407)
Q Consensus 277 L~~Li~~a~~LG---L~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~ 353 (407)
+..-++.+++.. ....|||+|.+|++.|+++ |+++|+.-|-+. +...+.++.+++. .
T Consensus 179 i~~av~~ar~~~~~~~~I~VEV~tleea~eA~~a-GaD~I~LDn~~~----------------e~l~~av~~l~~~---~ 238 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVEVENLEDALRAVEA-GADIVMLDNLSP----------------EEVKDISRRIKDI---N 238 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEESSHHHHHHHHHT-TCSEEEEESCCH----------------HHHHHHHHHHHHH---C
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHc-CCCEEEECCCCH----------------HHHHHHHHHhhcc---C
Confidence 344566777754 6789999999999999997 999999976433 3334444332210 1
Q ss_pred CCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015424 354 KNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 391 (407)
Q Consensus 354 ~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 391 (407)
..+.+.+.||| |++.+..+.+.|+|.+-||..+...+
T Consensus 239 ~~v~ieASGGI-t~eni~~~a~tGVD~IsvGslt~sa~ 275 (285)
T 1o4u_A 239 PNVIVEVSGGI-TEENVSLYDFETVDVISSSRLTLQEV 275 (285)
T ss_dssp TTSEEEEEECC-CTTTGGGGCCTTCCEEEEGGGTSSCC
T ss_pred CCceEEEECCC-CHHHHHHHHHcCCCEEEEeHHHcCCC
Confidence 25799999999 89999999999999999999887665
No 126
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=97.67 E-value=0.00033 Score=66.33 Aligned_cols=173 Identities=18% Similarity=0.229 Sum_probs=110.5
Q ss_pred HHHHHHcCCcEEEEEecCCcCCC---CHHHHHHHH---hcCCCCcEE------eccccCCHH-------HHHHHHHcCCC
Q 015424 203 ARSYEKGGAACLSILTDEKYFKG---SFENLEAVR---SAGVKCPLL------CKEFIVDAW-------QIYYARTKGAD 263 (407)
Q Consensus 203 A~ay~~~GA~aISVLTd~~~F~G---s~edL~~Vr---~a~v~lPVL------~KDFIid~~-------QI~eAr~~GAD 263 (407)
|...+++||+.|=.++.- .-+| |+..++.++ +. +++||. ..||..++. +|..++.+|||
T Consensus 14 a~~A~~~GAdRIELc~~L-~~GGlTPS~g~i~~~~~~~~~-~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~Gad 91 (224)
T 2bdq_A 14 LTRLDKAIISRVELCDNL-AVGGTTPSYGVIKEANQYLHE-KGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESD 91 (224)
T ss_dssp GGGCCTTTCCEEEEEBCG-GGTCBCCCHHHHHHHHHHHHH-TTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHcCCCEEEEcCCc-ccCCcCCCHHHHHHHHHhhhh-cCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCC
Confidence 456678999999988653 3345 889999998 76 799986 368998876 45678999999
Q ss_pred EEEEecc----CCCHHHHHHHHHHHHHcCCcEEE-----Ee--CCHHHH-HHHhcccCCcEEEeeccccccccccccccc
Q 015424 264 AVLLIAA----VLPDLDIRYMTKICKLLGLTALV-----EV--HDEREM-DRVLGIEGIELIGINNRNLAISIFSYRTET 331 (407)
Q Consensus 264 aVLLiaa----iL~~~~L~~Li~~a~~LGL~aLV-----EV--ht~eEl-erAl~l~Ga~iIGINnRdL~~~~~~~t~~T 331 (407)
+|.+++- -++.+.+++|++.|+ ||.+-. ++ .|..++ +...++ |++ |-| |..+-.+++
T Consensus 92 GvV~G~Lt~dg~iD~~~~~~Li~~a~--~~~vTFHRAFD~~~~~d~~~ale~L~~l-Gv~------rIL--TSG~~~~~~ 160 (224)
T 2bdq_A 92 ALVLGILTSNNHIDTEAIEQLLPATQ--GLPLVFHMAFDVIPKSDQKKSIDQLVAL-GFT------RIL--LHGSSNGEP 160 (224)
T ss_dssp EEEECCBCTTSSBCHHHHHHHHHHHT--TCCEEECGGGGGSCTTTHHHHHHHHHHT-TCC------EEE--ECSCSSCCC
T ss_pred EEEEeeECCCCCcCHHHHHHHHHHhC--CCeEEEECchhccCCcCHHHHHHHHHHc-CCC------EEE--CCCCCCCCc
Confidence 9999764 245577888888776 454311 23 555544 555565 654 333 111111122
Q ss_pred cccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHH-HcCCCEEEEcccccCCCChHH
Q 015424 332 FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQ-EAGVKAVLVGESIVKQDDPGK 395 (407)
Q Consensus 332 f~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~-~~GadaVLVGeaLmk~~dp~~ 395 (407)
-.-.++...+|.+.- ...+.+++.||| +++++..+. ..|++.|=...-+.++.+|-+
T Consensus 161 a~~g~~~L~~Lv~~a------~~ri~Im~GgGV-~~~Ni~~l~~~tGv~e~H~s~i~~~~~~~~~ 218 (224)
T 2bdq_A 161 IIENIKHIKALVEYA------NNRIEIMVGGGV-TAENYQYICQETGVKQAHGTRITQMAGDPLE 218 (224)
T ss_dssp GGGGHHHHHHHHHHH------TTSSEEEECSSC-CTTTHHHHHHHHTCCEEEETTCC--------
T ss_pred HHHHHHHHHHHHHhh------CCCeEEEeCCCC-CHHHHHHHHHhhCCCEEccccccCCCCCcch
Confidence 334455566665531 235789999999 777888876 689999887666666666643
No 127
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=97.67 E-value=0.00034 Score=83.62 Aligned_cols=175 Identities=13% Similarity=0.094 Sum_probs=115.2
Q ss_pred HHHHHHHHHHcCCcEEEEEecCCcCCCCHH----HHHHHHhcCC--CCcEEeccccCCHH-------HHHHHHHcCCCE-
Q 015424 199 PVEIARSYEKGGAACLSILTDEKYFKGSFE----NLEAVRSAGV--KCPLLCKEFIVDAW-------QIYYARTKGADA- 264 (407)
Q Consensus 199 p~~iA~ay~~~GA~aISVLTd~~~F~Gs~e----dL~~Vr~a~v--~lPVL~KDFIid~~-------QI~eAr~~GADa- 264 (407)
-.++|.+..++|. +-+++-.+++ +.+ .++.+|+. + +.|+-+.=+..+++ .+..+++.|++.
T Consensus 596 ~~~LaaAva~aGg--lG~i~g~g~~--~~e~l~~~i~~vk~~-~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~ 670 (2060)
T 2uva_G 596 PWDFVAATMNAGY--HIELAGGGYY--NAQKMSDAISKIEKA-IPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIE 670 (2060)
T ss_dssp SHHHHHHHHHTTC--EECEEGGGCC--SHHHHHHHHHHHGGG-SCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEE
T ss_pred cHHHHHHHHHCCC--EEEECcCCCC--CHHHHHHHHHHHHhh-cccCCCeEecccccCcccchhHHHHHHHHHHcCCCcc
Confidence 3568888877774 6666322222 344 44455554 4 46776554444443 456678999999
Q ss_pred -EEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHH----hcccCCcEEE---eeccccccccccccccccccCc
Q 015424 265 -VLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRV----LGIEGIELIG---INNRNLAISIFSYRTETFEVDN 336 (407)
Q Consensus 265 -VLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerA----l~l~Ga~iIG---INnRdL~~~~~~~t~~Tf~vDl 336 (407)
|...+.+-+. +++.++.+.+|+..+.-|.+..++.++ .++ |+|.|- +...+- |.+....++.
T Consensus 671 gv~~~~G~p~~---e~~~~~l~~~gi~~i~~v~~~~~a~~~v~~l~~a-G~D~iV~~q~~G~ea---GGH~g~~d~~--- 740 (2060)
T 2uva_G 671 GLTIGAGVPSI---EVANEYIQTLGIRHISFKPGSVDAIQQVINIAKA-NPTFPIILQWTGGRG---GGHHSFEDFH--- 740 (2060)
T ss_dssp EEEEESSCCCH---HHHHHHHHHSCCSEEEECCCSHHHHHHHHHHHHH-CTTSCEEEEECCTTS---SSSCCSCCSH---
T ss_pred eEeecCCCCCH---HHHHHHHHHcCCeEEEecCCHHHHHHHHHHHHHc-CCCEEEEeeeEcccC---CCCCCccccc---
Confidence 7766554433 345677788899999999999998877 776 898766 443333 1211111111
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHH-----------HcCCCEEEEcccccCCCC
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQ-----------EAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~-----------~~GadaVLVGeaLmk~~d 392 (407)
..+..+++.++. ..++++|+.|||.+.+|+..+. .+|||||.||+.+|-...
T Consensus 741 ~~~l~lv~~i~~----~~~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~E 803 (2060)
T 2uva_G 741 QPILLMYSRIRK----CSNIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKE 803 (2060)
T ss_dssp HHHHHHHHHHHT----STTEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTT
T ss_pred chHHHHHHHHHH----HcCCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcC
Confidence 122344444322 1368999999999999999999 999999999999997644
No 128
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.66 E-value=0.00014 Score=70.90 Aligned_cols=88 Identities=23% Similarity=0.241 Sum_probs=66.7
Q ss_pred HHHHHHHc---CCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCc
Q 015424 280 MTKICKLL---GLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNI 356 (407)
Q Consensus 280 Li~~a~~L---GL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v 356 (407)
-++.+++. .+..-|||+|.+|++.|++. |+++|++-|-+. +.+++..+.+ ...+
T Consensus 185 av~~ar~~~~~~~~IgVev~t~eea~eA~~a-GaD~I~ld~~~~----------------~~~k~av~~v------~~~i 241 (286)
T 1x1o_A 185 AVRRAKARAPHYLKVEVEVRSLEELEEALEA-GADLILLDNFPL----------------EALREAVRRV------GGRV 241 (286)
T ss_dssp HHHHHHHHSCTTSCEEEEESSHHHHHHHHHH-TCSEEEEESCCH----------------HHHHHHHHHH------TTSS
T ss_pred HHHHHHHhCCCCCEEEEEeCCHHHHHHHHHc-CCCEEEECCCCH----------------HHHHHHHHHh------CCCC
Confidence 44555553 25678999999999999997 999999976433 2233444332 1257
Q ss_pred eEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015424 357 IVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 391 (407)
Q Consensus 357 ~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 391 (407)
++++.||| |++.+..+.+.|+|+|-||..+...+
T Consensus 242 pi~AsGGI-t~eni~~~a~tGvD~IsVgs~~~~a~ 275 (286)
T 1x1o_A 242 PLEASGNM-TLERAKAAAEAGVDYVSVGALTHSAK 275 (286)
T ss_dssp CEEEESSC-CHHHHHHHHHHTCSEEECTHHHHSCC
T ss_pred eEEEEcCC-CHHHHHHHHHcCCCEEEEcHHHcCCC
Confidence 89999999 89999999999999999998766543
No 129
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=97.64 E-value=0.00017 Score=88.76 Aligned_cols=176 Identities=15% Similarity=0.188 Sum_probs=113.6
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCH----HHHHHHHhcCC--CCcEEeccccCCHH----------HHHHHHHcC--
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSAGV--KCPLLCKEFIVDAW----------QIYYARTKG-- 261 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~----edL~~Vr~a~v--~lPVL~KDFIid~~----------QI~eAr~~G-- 261 (407)
.++|.+..++|. +-++.-..++ ++ +.|+.+|+. + +.|+=..=+...++ .+..+++.|
T Consensus 442 ~~LaaAVs~AGg--lG~l~~~g~~--~~~~l~~~i~~~r~~-~~~~~p~~vNl~~~~p~~~~~~~g~~~~~~~~~~~g~~ 516 (3089)
T 3zen_D 442 AKIVAAAANAGH--WAELAGGGQV--TEQIFNDRIAELETL-LEPGRAIQFNTLFLDPYLWKLQVGGKRLVQRARQSGAP 516 (3089)
T ss_dssp HHHHHHHHHTTC--EEEECSTTCC--SHHHHHHHHHHHHHH-SCTTCCCEEEEECSCHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHhCCC--ceeecCCCCC--CHHHHHHHHHHHHHh-cCCCCceeechhhcChhhhhhccCHHHHHHHHHHcCCC
Confidence 367777777664 5555322211 23 455666664 4 45542211112332 356678999
Q ss_pred CCEEEEeccCCCHHHHHHHHHHHHHcCCcEEE-EeCCHHHHHHHhcccCCc------EEEeecccccccccccccccccc
Q 015424 262 ADAVLLIAAVLPDLDIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGIE------LIGINNRNLAISIFSYRTETFEV 334 (407)
Q Consensus 262 ADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLV-EVht~eElerAl~l~Ga~------iIGINnRdL~~~~~~~t~~Tf~v 334 (407)
+|+|++.+-+-+.++..++++.+++.|+..+. -+.+.+++.++.++ +++ +|-+..-.= .|.. ...
T Consensus 517 vdgv~~~aG~P~~ee~~~~i~~l~~~Gi~~i~~~~~t~~~a~~~~~i-~~d~~~~~y~vv~~G~ea----GGH~---g~~ 588 (3089)
T 3zen_D 517 IDGLVVSAGIPDLEEAVDIIDELNEVGISHVVFKPGTVEQIRSVIRI-AAEVPTKPVIVHIEGGRA----GGHH---SWE 588 (3089)
T ss_dssp CCEEEEESSCCCHHHHHHHHTSTTHHHHCSEEECCCSHHHHHHHHHH-HTTSTTSCEEEEECCSSS----SEEC---CSC
T ss_pred ceEEEEeCCCCchhHhHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHh-hhhcCCCcEEEEEeCCCc----CCCC---Ccc
Confidence 99998876444456777888888888998887 89999999888887 776 555544322 1111 112
Q ss_pred CchhHH-HHhhcccccccccCCceEEEeeCCCCHHHHHHHH-----------HcCCCEEEEcccccCCCC
Q 015424 335 DNSNTK-KLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQ-----------EAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 335 Dl~~t~-~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~-----------~~GadaVLVGeaLmk~~d 392 (407)
++.... .+...++. ..++++|+.|||.+++++..+. .+|||||+||+++|....
T Consensus 589 ~~~~ll~~~~~~ir~----~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~E 654 (3089)
T 3zen_D 589 DLDDLLLATYSELRS----RSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATLE 654 (3089)
T ss_dssp CHHHHHHHHHHHHTT----CTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCTT
T ss_pred cHHHHHHHHHHHHhh----cCCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhCcc
Confidence 322211 11132211 1478999999999999999999 999999999999998764
No 130
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=97.60 E-value=0.0019 Score=62.86 Aligned_cols=146 Identities=18% Similarity=0.172 Sum_probs=96.8
Q ss_pred CCCcEEeccccCCHHHHHHH----HHcCCCEEEEeccC--------------C-CHHHHHHHHHHHHH-cCCcEEEEeC-
Q 015424 238 VKCPLLCKEFIVDAWQIYYA----RTKGADAVLLIAAV--------------L-PDLDIRYMTKICKL-LGLTALVEVH- 296 (407)
Q Consensus 238 v~lPVL~KDFIid~~QI~eA----r~~GADaVLLiaai--------------L-~~~~L~~Li~~a~~-LGL~aLVEVh- 296 (407)
.+.|+...=+..++.+..+| ..+ +|+|-|.+.. + ....+.++++..++ .|+.+.|-++
T Consensus 57 ~~~~~~~QL~g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~ 135 (318)
T 1vhn_A 57 HERNVAVQIFGSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRL 135 (318)
T ss_dssp TCTTEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEES
T ss_pred CCCeEEEEeCCCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecC
Confidence 46677655455667655443 356 9999987532 2 23345566666554 5777776643
Q ss_pred ------CHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHH
Q 015424 297 ------DEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDI 370 (407)
Q Consensus 297 ------t~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~ 370 (407)
..+.++.+.+. |++.|-+..|... .+|+ -..+++ ++.. +.. ++++|+-|||.|++|+
T Consensus 136 G~~~~~~~~~a~~l~~~-G~d~i~v~g~~~~---~~~~---~~~~~~----~i~~-----i~~-~ipVi~~GgI~s~~da 198 (318)
T 1vhn_A 136 GWEKNEVEEIYRILVEE-GVDEVFIHTRTVV---QSFT---GRAEWK----ALSV-----LEK-RIPTFVSGDIFTPEDA 198 (318)
T ss_dssp CSSSCCHHHHHHHHHHT-TCCEEEEESSCTT---TTTS---SCCCGG----GGGG-----SCC-SSCEEEESSCCSHHHH
T ss_pred CCChHHHHHHHHHHHHh-CCCEEEEcCCCcc---ccCC---CCcCHH----HHHH-----HHc-CCeEEEECCcCCHHHH
Confidence 12456666675 9999999766430 0111 123332 3333 223 6789999999999999
Q ss_pred HHHHH-cCCCEEEEcccccCCCChHHHHHhhh
Q 015424 371 AYVQE-AGVKAVLVGESIVKQDDPGKGITGLF 401 (407)
Q Consensus 371 ~~l~~-~GadaVLVGeaLmk~~dp~~~i~~L~ 401 (407)
.++.+ .|||+|.||.+++..++....+++.+
T Consensus 199 ~~~l~~~gad~V~iGR~~l~~P~l~~~~~~~~ 230 (318)
T 1vhn_A 199 KRALEESGCDGLLVARGAIGRPWIFKQIKDFL 230 (318)
T ss_dssp HHHHHHHCCSEEEESGGGTTCTTHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECHHHHhCcchHHHHHHHH
Confidence 99998 79999999999999999887776644
No 131
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=97.59 E-value=0.0013 Score=63.37 Aligned_cols=161 Identities=17% Similarity=0.167 Sum_probs=110.6
Q ss_pred HHHHHHHHcCCcEEEEEecCCcCCC---CHHHHHHHHhcCCCCcEE------eccccCCHH-------HHHHHHHcCCCE
Q 015424 201 EIARSYEKGGAACLSILTDEKYFKG---SFENLEAVRSAGVKCPLL------CKEFIVDAW-------QIYYARTKGADA 264 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVLTd~~~F~G---s~edL~~Vr~a~v~lPVL------~KDFIid~~-------QI~eAr~~GADa 264 (407)
+-|...+++||+.|=.++.- .-+| |+..++.+++. +++||. ..||..++. +|..++.+|||+
T Consensus 12 ~~a~~A~~~GAdRIELc~~L-~~GGlTPS~g~i~~~~~~-~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadG 89 (256)
T 1twd_A 12 ECALTAQQNGADRVELCAAP-KEGGLTPSLGVLKSVRQR-VTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPG 89 (256)
T ss_dssp HHHHHHHHTTCSEEEECBCG-GGTCBCCCHHHHHHHHHH-CCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCEEEEcCCc-ccCCCCCCHHHHHHHHHH-cCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCE
Confidence 45778889999999988653 3445 88999999987 899986 368998876 456789999999
Q ss_pred EEEecc----CCCHHHHHHHHHHHHHcCCcEEE-----EeCCHHHH-HHHhcccCCcEEEeecccccccccccccccccc
Q 015424 265 VLLIAA----VLPDLDIRYMTKICKLLGLTALV-----EVHDEREM-DRVLGIEGIELIGINNRNLAISIFSYRTETFEV 334 (407)
Q Consensus 265 VLLiaa----iL~~~~L~~Li~~a~~LGL~aLV-----EVht~eEl-erAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~v 334 (407)
|.+++- -++.+.+++|++.|+ ||.+-. ++.|..++ +...++ |++ |-| |..+ ..+-.-
T Consensus 90 vV~G~Lt~dg~iD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~ale~L~~l-G~~------rIL--TSG~--~~~a~~ 156 (256)
T 1twd_A 90 LVTGVLDVDGNVDMPRMEKIMAAAG--PLAVTFHRAFDMCANPLYTLNNLAEL-GIA------RVL--TSGQ--KSDALQ 156 (256)
T ss_dssp EEECCBCTTSSBCHHHHHHHHHHHT--TSEEEECGGGGGCSCHHHHHHHHHHH-TCC------EEE--ECTT--SSSTTT
T ss_pred EEEeeECCCCCcCHHHHHHHHHHhC--CCcEEEECchhccCCHHHHHHHHHHc-CCC------EEE--CCCC--CCCHHH
Confidence 999864 235577888888776 554311 24566554 455565 654 233 1111 123333
Q ss_pred CchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEc
Q 015424 335 DNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVG 384 (407)
Q Consensus 335 Dl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVG 384 (407)
.++...+|.+. - . .+.+++.||| +++++..+...|++.|=.+
T Consensus 157 g~~~L~~Lv~~-----a-~-~i~Im~GgGv-~~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 157 GLSKIMELIAH-----R-D-APIIMAGAGV-RAENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp THHHHHHHHTS-----S-S-CCEEEEESSC-CTTTHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHh-----h-C-CcEEEecCCc-CHHHHHHHHHcCCCeEeEC
Confidence 45556666553 1 2 5789999999 7788888888999988755
No 132
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=97.58 E-value=0.0004 Score=67.97 Aligned_cols=125 Identities=19% Similarity=0.200 Sum_probs=84.5
Q ss_pred CCCcEE--eccc-cCCHHHHHHHHHcCC--------CEEEEe---ccCCCHHHHHHHHHHHHHc--CCcEEEEeCCHHHH
Q 015424 238 VKCPLL--CKEF-IVDAWQIYYARTKGA--------DAVLLI---AAVLPDLDIRYMTKICKLL--GLTALVEVHDEREM 301 (407)
Q Consensus 238 v~lPVL--~KDF-Iid~~QI~eAr~~GA--------DaVLLi---aaiL~~~~L~~Li~~a~~L--GL~aLVEVht~eEl 301 (407)
+++-|+ ||-+ .+-..+-|.++.-|+ |+||+- ..+... +...++.+++. .....|||+|.+|+
T Consensus 134 ~~~~i~dTRKT~PglR~l~kyAV~~GGg~nHR~gL~d~vlikdNHi~~~G~--i~~Av~~ar~~~~~~~IeVEv~tl~ea 211 (287)
T 3tqv_A 134 YKTKLLDTRKTIPGFRLAQKYAVRCGGGFNHRIGLFDAYLIKENHIRSAGG--IAKAVTKAKKLDSNKVVEVEVTNLDEL 211 (287)
T ss_dssp SSCEEECCSCCCTTCHHHHHHHHHHTTCBCCCSSSSSSEEECTTTC----C--HHHHHHHHHHHCTTSCEEEEESSHHHH
T ss_pred CCeEEEeecccCcchHHHHHHHHHhcCchheeccCccEEEEeHHHHHHhCC--HHHHHHHHHhhCCCCcEEEEeCCHHHH
Confidence 344444 4553 233346676777777 677762 112221 34455555554 57789999999999
Q ss_pred HHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEE
Q 015424 302 DRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAV 381 (407)
Q Consensus 302 erAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaV 381 (407)
+.|+++ |+++|...|-++ +...+.++.+ ...+.+.+.||| |++.+..+.+.|+|.+
T Consensus 212 ~eAl~a-GaD~I~LDn~~~----------------~~l~~av~~~------~~~v~ieaSGGI-t~~~i~~~a~tGVD~I 267 (287)
T 3tqv_A 212 NQAIAA-KADIVMLDNFSG----------------EDIDIAVSIA------RGKVALEVSGNI-DRNSIVAIAKTGVDFI 267 (287)
T ss_dssp HHHHHT-TCSEEEEESCCH----------------HHHHHHHHHH------TTTCEEEEESSC-CTTTHHHHHTTTCSEE
T ss_pred HHHHHc-CCCEEEEcCCCH----------------HHHHHHHHhh------cCCceEEEECCC-CHHHHHHHHHcCCCEE
Confidence 999997 999999965433 3334444432 235789999999 9999999999999999
Q ss_pred EEccccc
Q 015424 382 LVGESIV 388 (407)
Q Consensus 382 LVGeaLm 388 (407)
-||.-..
T Consensus 268 svGalt~ 274 (287)
T 3tqv_A 268 SVGAITK 274 (287)
T ss_dssp ECSHHHH
T ss_pred EEChhhc
Confidence 9996543
No 133
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=97.57 E-value=0.00067 Score=67.97 Aligned_cols=164 Identities=15% Similarity=0.064 Sum_probs=98.7
Q ss_pred HHHHHHHhc--CCCCcEEeccccCCHHHHHH----H---HHcCCCEEEEecc--------CC--CHHHHHHHHHHHHH-c
Q 015424 228 ENLEAVRSA--GVKCPLLCKEFIVDAWQIYY----A---RTKGADAVLLIAA--------VL--PDLDIRYMTKICKL-L 287 (407)
Q Consensus 228 edL~~Vr~a--~v~lPVL~KDFIid~~QI~e----A---r~~GADaVLLiaa--------iL--~~~~L~~Li~~a~~-L 287 (407)
..++.+++. ..+.||...=+..++.+..+ . ...|+|+|-|..+ .| +.+.+.++++..++ .
T Consensus 113 ~~~~~l~~~~~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~ 192 (354)
T 4ef8_A 113 FYLAYAAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY 192 (354)
T ss_dssp HHHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhh
Confidence 445555532 14678765433334433222 1 1468999999886 23 44677888887765 4
Q ss_pred CCcEEEEeC---CHHHHHHHh----cccC-CcEEEeeccc---cccc-------------cccccccc-cccCchhHHHH
Q 015424 288 GLTALVEVH---DEREMDRVL----GIEG-IELIGINNRN---LAIS-------------IFSYRTET-FEVDNSNTKKL 342 (407)
Q Consensus 288 GL~aLVEVh---t~eElerAl----~l~G-a~iIGINnRd---L~~~-------------~~~~t~~T-f~vDl~~t~~L 342 (407)
.+.++|-+. |.+++.++. +. | ++.|-+.|.- +.+. ..+|+..- ...+++...++
T Consensus 193 ~~PV~vKi~p~~d~~~~~~~a~~~~~~-Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v 271 (354)
T 4ef8_A 193 PHSFGVKMPPYFDFAHFDAAAEILNEF-PKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAF 271 (354)
T ss_dssp CSCEEEEECCCCSHHHHHHHHHHHHTC-TTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHHHHHHhC-CCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHH
Confidence 777777766 556665544 43 5 7766654431 1000 00111111 11234444444
Q ss_pred hhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC-CChHHHHHh
Q 015424 343 LEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ-DDPGKGITG 399 (407)
Q Consensus 343 ~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~-~dp~~~i~~ 399 (407)
.+. . .++++|+.|||.|.+|+.++..+||++|.||++++.. +...+.+.+
T Consensus 272 ~~~-----~--~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~~~i~~ 322 (354)
T 4ef8_A 272 YRR-----C--PGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTS 322 (354)
T ss_dssp HHH-----C--TTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHH
T ss_pred HHh-----C--CCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHHHHHHH
Confidence 332 1 3689999999999999999999999999999999976 766554443
No 134
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.55 E-value=0.00051 Score=67.74 Aligned_cols=121 Identities=9% Similarity=0.078 Sum_probs=91.2
Q ss_pred CHHHHHHHHHHcC--CcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEec---cCC
Q 015424 198 DPVEIARSYEKGG--AACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIA---AVL 272 (407)
Q Consensus 198 dp~~iA~ay~~~G--A~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLia---aiL 272 (407)
+..+.++.+.+.| +.+|.+.+-..++....+.++.+|+. ++.|++.++.+.++.+...+..+|||+|.+.. +.+
T Consensus 106 ~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~-~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~ 184 (336)
T 1ypf_A 106 DEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKH-LPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVC 184 (336)
T ss_dssp HHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHH-CTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTC
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHh-CCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCcee
Confidence 3456788889999 99998754222233346788888886 66555667778999999999999999999932 222
Q ss_pred CH--------H--HHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhcccCCcEEEeecccc
Q 015424 273 PD--------L--DIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNL 320 (407)
Q Consensus 273 ~~--------~--~L~~Li~~a~~LGL~aLV--EVht~eElerAl~l~Ga~iIGINnRdL 320 (407)
+. . .+..+.+.++..++.++. -|.+..++.+++.+ ||+.+++-..-+
T Consensus 185 ~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kalal-GAdaV~iGr~~l 243 (336)
T 1ypf_A 185 ITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSIRF-GATMVMIGSLFA 243 (336)
T ss_dssp HHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHHHT-TCSEEEESGGGT
T ss_pred ecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHc-CCCEEEeChhhh
Confidence 11 0 455677777777999999 89999999999998 999999976655
No 135
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=97.55 E-value=0.00082 Score=67.08 Aligned_cols=156 Identities=14% Similarity=0.014 Sum_probs=91.9
Q ss_pred CCCcEEeccccCCHHHHHH-HH---HcCCC-EEEEecc--------CC--CHHHHHHHHHHHHH-cCCcEEEEeC---CH
Q 015424 238 VKCPLLCKEFIVDAWQIYY-AR---TKGAD-AVLLIAA--------VL--PDLDIRYMTKICKL-LGLTALVEVH---DE 298 (407)
Q Consensus 238 v~lPVL~KDFIid~~QI~e-Ar---~~GAD-aVLLiaa--------iL--~~~~L~~Li~~a~~-LGL~aLVEVh---t~ 298 (407)
.+.||...=+..++.+..+ |+ .+|+| +|-|..+ .| +.+.+.++++..++ ....++|-+. +.
T Consensus 127 ~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~~~~ 206 (345)
T 3oix_A 127 DSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPYFDI 206 (345)
T ss_dssp TCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCCH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCCCCH
Confidence 5778875433445544333 22 35877 9999876 23 44667777777665 3677777766 67
Q ss_pred HHHHHHhcccCCc-EEEeeccc-----ccccc-----------cccccc-ccccCchhHHHHhhcccccccccCCceEEE
Q 015424 299 REMDRVLGIEGIE-LIGINNRN-----LAISI-----------FSYRTE-TFEVDNSNTKKLLEGERGEIIRQKNIIVVG 360 (407)
Q Consensus 299 eElerAl~l~Ga~-iIGINnRd-----L~~~~-----------~~~t~~-Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVA 360 (407)
+|+.++++..|++ +.+||.-| +.++. .+|+.. .+...++...++.+. + +.++++|+
T Consensus 207 ~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~-----~-~~~ipIIg 280 (345)
T 3oix_A 207 VHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKR-----L-NPSIQIIG 280 (345)
T ss_dssp HHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTT-----S-CTTSEEEE
T ss_pred HHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHH-----c-CCCCcEEE
Confidence 7776665543553 22232111 00000 001100 011112333333332 2 23689999
Q ss_pred eeCCCCHHHHHHHHHcCCCEEEEccc-ccCCCChHHHHHh
Q 015424 361 ESGLFTPDDIAYVQEAGVKAVLVGES-IVKQDDPGKGITG 399 (407)
Q Consensus 361 ESGI~t~eD~~~l~~~GadaVLVGea-Lmk~~dp~~~i~~ 399 (407)
.|||.|++|+.++..+|||+|-||++ ++..+.....+.+
T Consensus 281 ~GGI~s~~da~~~l~aGAd~V~igra~~~~gP~~~~~i~~ 320 (345)
T 3oix_A 281 TGGVXTGRDAFEHILCGASMVQIGTALHQEGPQIFKRITK 320 (345)
T ss_dssp ESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHH
T ss_pred ECCCCChHHHHHHHHhCCCEEEEChHHHhcChHHHHHHHH
Confidence 99999999999999999999999999 7777765544443
No 136
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.51 E-value=0.001 Score=70.08 Aligned_cols=127 Identities=17% Similarity=0.131 Sum_probs=88.4
Q ss_pred HHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHc--CCcEEE-EeCCHHHHHHHhcccCCcEEEeeccccccccccccccc
Q 015424 255 YYARTKGADAVLLIAAVLPDLDIRYMTKICKLL--GLTALV-EVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTET 331 (407)
Q Consensus 255 ~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~L--GL~aLV-EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~T 331 (407)
....++|+|.|.+..+--......++++..++. .+++++ -|.|.+.++..+++ ||+.|=|. +++|..-|+..
T Consensus 287 ~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~a-GAD~vkVG----iGpGSiCtTr~ 361 (556)
T 4af0_A 287 KLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAA-GADGLRIG----MGSGSICITQE 361 (556)
T ss_dssp HHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHH-TCSEEEEC----SSCSTTBCCTT
T ss_pred HHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHc-CCCEEeec----CCCCccccccc
Confidence 334689999999998866555566677777765 667666 67898888888886 99977653 34444444322
Q ss_pred c-ccCchh---HHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015424 332 F-EVDNSN---TKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 391 (407)
Q Consensus 332 f-~vDl~~---t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 391 (407)
. .+...+ ..+..+.. ...++++||-|||+++-|+.+...+|||+|.+|+-|-...
T Consensus 362 v~GvG~PQ~tAi~~~a~~a-----~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMlGsllAGt~ 420 (556)
T 4af0_A 362 VMAVGRPQGTAVYAVAEFA-----SRFGIPCIADGGIGNIGHIAKALALGASAVMMGGLLAGTT 420 (556)
T ss_dssp TCCSCCCHHHHHHHHHHHH-----GGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBT
T ss_pred ccCCCCcHHHHHHHHHHHH-----HHcCCCEEecCCcCcchHHHHHhhcCCCEEEEchhhcccc
Confidence 1 122222 22222221 1246899999999999999999999999999999886543
No 137
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=97.47 E-value=0.00037 Score=67.96 Aligned_cols=93 Identities=22% Similarity=0.227 Sum_probs=68.5
Q ss_pred HHHHHHHHHcC--CcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCC
Q 015424 278 RYMTKICKLLG--LTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKN 355 (407)
Q Consensus 278 ~~Li~~a~~LG--L~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~ 355 (407)
..-++.+++.. ....|||+|.+|++.++++ |+++|..-|.+. +...+.++.+++. ...
T Consensus 182 ~~av~~ar~~~~~~~I~Vev~t~eea~eal~a-GaD~I~LDn~~~----------------~~~~~~v~~l~~~---~~~ 241 (284)
T 1qpo_A 182 VDALRAVRNAAPDLPCEVEVDSLEQLDAVLPE-KPELILLDNFAV----------------WQTQTAVQRRDSR---APT 241 (284)
T ss_dssp HHHHHHHHHHCTTSCEEEEESSHHHHHHHGGG-CCSEEEEETCCH----------------HHHHHHHHHHHHH---CTT
T ss_pred HHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHc-CCCEEEECCCCH----------------HHHHHHHHHhhcc---CCC
Confidence 34455555543 3789999999999999997 999999965433 2333444332210 125
Q ss_pred ceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015424 356 IIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 391 (407)
Q Consensus 356 v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 391 (407)
+.+.+.||| |++.+..+.+.|+|.+.||..+...+
T Consensus 242 v~ieaSGGI-t~~~i~~~a~tGVD~isvG~l~~~a~ 276 (284)
T 1qpo_A 242 VMLESSGGL-SLQTAATYAETGVDYLAVGALTHSVR 276 (284)
T ss_dssp CEEEEESSC-CTTTHHHHHHTTCSEEECGGGTSSBC
T ss_pred eEEEEECCC-CHHHHHHHHhcCCCEEEECHHHcCCC
Confidence 789999999 99999999999999999999776554
No 138
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=97.47 E-value=0.00061 Score=68.47 Aligned_cols=131 Identities=13% Similarity=0.137 Sum_probs=82.6
Q ss_pred cCCCEEEEeccC--------C-CHHHHHHHHHHHHH--------cCCcEEEEeC---CHHH----HHHHhcccCCcEEEe
Q 015424 260 KGADAVLLIAAV--------L-PDLDIRYMTKICKL--------LGLTALVEVH---DERE----MDRVLGIEGIELIGI 315 (407)
Q Consensus 260 ~GADaVLLiaai--------L-~~~~L~~Li~~a~~--------LGL~aLVEVh---t~eE----lerAl~l~Ga~iIGI 315 (407)
-+||+|-|..+. | +++.+.++++..++ ....++|-+. +.++ ++.+.+. |++.|-+
T Consensus 175 ~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~a-Gadgi~v 253 (367)
T 3zwt_A 175 PLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKEL-GIDGLIV 253 (367)
T ss_dssp GGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHH-TCCEEEE
T ss_pred hhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHc-CCCEEEE
Confidence 358999998763 2 34567777776543 4677777776 3333 3444554 9998888
Q ss_pred ecccccccc----------ccccccc-cccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEc
Q 015424 316 NNRNLAISI----------FSYRTET-FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVG 384 (407)
Q Consensus 316 NnRdL~~~~----------~~~t~~T-f~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVG 384 (407)
.|+...... .+++... ....++...++.+. + +.++++|+.|||.|++|+.++..+|||+|.||
T Consensus 254 ~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~-----v-~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 254 TNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYAL-----T-QGRVPIIGVGGVSSGQDALEKIRAGASLVQLY 327 (367)
T ss_dssp CCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHH-----T-TTCSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred eCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHH-----c-CCCceEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 777531100 0111110 11122333444333 1 23689999999999999999999999999999
Q ss_pred cccc-CCCChHHHH
Q 015424 385 ESIV-KQDDPGKGI 397 (407)
Q Consensus 385 eaLm-k~~dp~~~i 397 (407)
++++ ..++....+
T Consensus 328 ra~l~~gP~~~~~i 341 (367)
T 3zwt_A 328 TALTFWGPPVVGKV 341 (367)
T ss_dssp HHHHHHCTHHHHHH
T ss_pred HHHHhcCcHHHHHH
Confidence 9994 556554443
No 139
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.47 E-value=0.00023 Score=66.96 Aligned_cols=158 Identities=16% Similarity=0.152 Sum_probs=97.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhc--CCCCcEEe-cccc----CCH---HHHHHHHHcCCCEEE
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLC-KEFI----VDA---WQIYYARTKGADAVL 266 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a--~v~lPVL~-KDFI----id~---~QI~eAr~~GADaVL 266 (407)
.++.++++...++|+.++-| ++..++.+++. +.+++|-. =+|= ... .++.+|...|||.|-
T Consensus 19 ~~i~~l~~~a~~~~~~aVcv---------~p~~v~~~~~~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAdevd 89 (220)
T 1ub3_A 19 EEVAKAAEEALEYGFYGLCI---------PPSYVAWVRARYPHAPFRLVTVVGFPLGYQEKEVKALEAALACARGADEVD 89 (220)
T ss_dssp HHHHHHHHHHHHHTCSEEEC---------CGGGHHHHHHHCTTCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHhCCCEEEE---------CHHHHHHHHHHhCCCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCEEE
Confidence 46677777888889988877 35566666532 23455432 1331 111 477889999999997
Q ss_pred EeccCC---C--H----HHHHHHHHHHHHcCCcEEEEeC--CHHHHHHHhcc---cCCcEEEeecccccccccccccccc
Q 015424 267 LIAAVL---P--D----LDIRYMTKICKLLGLTALVEVH--DEREMDRVLGI---EGIELIGINNRNLAISIFSYRTETF 332 (407)
Q Consensus 267 LiaaiL---~--~----~~L~~Li~~a~~LGL~aLVEVh--t~eElerAl~l---~Ga~iIGINnRdL~~~~~~~t~~Tf 332 (407)
+..-+- + . +++..+.+.|+..+|.+++|.. +.+++.++..+ .|||+|=+. +||++.
T Consensus 90 ~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTs--------TGf~~~-- 159 (220)
T 1ub3_A 90 MVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTS--------TGFGPR-- 159 (220)
T ss_dssp EECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECC--------CSSSSC--
T ss_pred ecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeC--------CCCCCC--
Confidence 744322 1 1 2444455555556788898876 67776655433 288887763 223211
Q ss_pred ccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCC
Q 015424 333 EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVK 379 (407)
Q Consensus 333 ~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gad 379 (407)
...++....+.+.. ...+.+.+.|||+|.+|+..+.++|++
T Consensus 160 gat~~dv~~m~~~v------g~~v~VkaaGGirt~~~al~~i~aGa~ 200 (220)
T 1ub3_A 160 GASLEDVALLVRVA------QGRAQVKAAGGIRDRETALRMLKAGAS 200 (220)
T ss_dssp CCCHHHHHHHHHHH------TTSSEEEEESSCCSHHHHHHHHHTTCS
T ss_pred CCCHHHHHHHHHhh------CCCCeEEEECCCCCHHHHHHHHHCCCc
Confidence 11222222222211 246799999999999999999999999
No 140
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=97.46 E-value=0.00076 Score=66.32 Aligned_cols=125 Identities=18% Similarity=0.251 Sum_probs=80.1
Q ss_pred CCcEE--eccc-cCCHHHHHHHHHcCC--------CEEEE----eccCCCHHHHHHHHHHHHHc--CCcEEEEeCCHHHH
Q 015424 239 KCPLL--CKEF-IVDAWQIYYARTKGA--------DAVLL----IAAVLPDLDIRYMTKICKLL--GLTALVEVHDEREM 301 (407)
Q Consensus 239 ~lPVL--~KDF-Iid~~QI~eAr~~GA--------DaVLL----iaaiL~~~~L~~Li~~a~~L--GL~aLVEVht~eEl 301 (407)
++-++ ||-+ .+-..+-|.++.-|+ |+|++ +... . .+..-++.+++. +....|||.|.+|+
T Consensus 146 ~~~i~~TRKt~Pglr~l~kyAv~~GGg~nHR~gL~d~vlikdNHi~~~-G--~i~~Av~~~r~~~p~~~ieVEvdtlde~ 222 (298)
T 3gnn_A 146 RARILDTRKTLPGLRLAQKYAVRVGGGANQRLALYAGILIKENHIAAA-G--GVGEALDAAFALNAEVPVQIEVETLDQL 222 (298)
T ss_dssp SCCEECCSCCCTTCHHHHHHHHHHTTCCCC----------------------CHHHHHHHHHHHC--CCCEEEESSHHHH
T ss_pred CeEEEEecCCCcchHHHHHhhHHhcCccceecCCCcEEEEeHHHHHHc-C--CHHHHHHHHHHhCCCCCEEEEeCCHHHH
Confidence 44455 4553 122346666677777 34444 2111 1 133445555553 56778999999999
Q ss_pred HHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEE
Q 015424 302 DRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAV 381 (407)
Q Consensus 302 erAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaV 381 (407)
+.|+++ |+++|-..|-++ +...+.++.+ ...+.+.+.||| +++.+..+.+.|+|.+
T Consensus 223 ~eAl~a-GaD~I~LDn~~~----------------~~l~~av~~i------~~~v~ieaSGGI-~~~~i~~~a~tGVD~i 278 (298)
T 3gnn_A 223 RTALAH-GARSVLLDNFTL----------------DMMRDAVRVT------EGRAVLEVSGGV-NFDTVRAIAETGVDRI 278 (298)
T ss_dssp HHHHHT-TCEEEEEESCCH----------------HHHHHHHHHH------TTSEEEEEESSC-STTTHHHHHHTTCSEE
T ss_pred HHHHHc-CCCEEEECCCCH----------------HHHHHHHHHh------CCCCeEEEEcCC-CHHHHHHHHHcCCCEE
Confidence 999997 999999976544 2333443331 246789999999 9999999999999999
Q ss_pred EEcccccCC
Q 015424 382 LVGESIVKQ 390 (407)
Q Consensus 382 LVGeaLmk~ 390 (407)
-||......
T Consensus 279 svG~lt~sa 287 (298)
T 3gnn_A 279 SIGALTKDV 287 (298)
T ss_dssp ECGGGGTSC
T ss_pred EECCeecCC
Confidence 999865443
No 141
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.46 E-value=0.00023 Score=66.52 Aligned_cols=88 Identities=13% Similarity=0.032 Sum_probs=62.2
Q ss_pred HHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCC
Q 015424 299 REMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGV 378 (407)
Q Consensus 299 eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Ga 378 (407)
+-++.+.+. |++.|-+...+-.+ .....+++...++.+. -++++++.|||.+++|+..+.++||
T Consensus 39 ~~a~~~~~~-G~~~i~v~d~~~~~-------~~~~~~~~~i~~i~~~--------~~ipvi~~Ggi~~~~~~~~~l~~Ga 102 (247)
T 3tdn_A 39 DWVVEVEKR-GAGEILLTSIDRDG-------TKSGYDTEMIRFVRPL--------TTLPIIASGGAGKMEHFLEAFLRGA 102 (247)
T ss_dssp HHHHHHHHT-TCSEEEEEETTTTT-------CSSCCCHHHHHHHGGG--------CCSCEEEESCCCSHHHHHHHHHTTC
T ss_pred HHHHHHHHc-CCCEEEEEecCccc-------CCCcccHHHHHHHHHh--------CCCCEEEeCCCCCHHHHHHHHHcCC
Confidence 344455554 88888776554311 1123456666666553 3678999999999999999999999
Q ss_pred CEEEEcccccCCCChHHHHHhhhc
Q 015424 379 KAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 379 daVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
|+|+||++++..++....+.+.++
T Consensus 103 d~V~ig~~~l~dp~~~~~~~~~~g 126 (247)
T 3tdn_A 103 DKVSINTAAVENPSLITQIAQTFG 126 (247)
T ss_dssp SEECCSHHHHHCTHHHHHHHHHHC
T ss_pred CeeehhhHHhhChHHHHHHHHHhC
Confidence 999999999988776555555443
No 142
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.45 E-value=0.00091 Score=69.56 Aligned_cols=121 Identities=12% Similarity=0.166 Sum_probs=93.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEe------c
Q 015424 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLI------A 269 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLi------a 269 (407)
..+..+.|+++.++|+++|.+.+-...+.+-.+.++.+|+...++||+.+. +.+..+...+..+|||+|.+. +
T Consensus 229 ~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~-v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~ 307 (496)
T 4fxs_A 229 APGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN-VATAEGARALIEAGVSAVKVGIGPGSIC 307 (496)
T ss_dssp SSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEE-ECSHHHHHHHHHHTCSEEEECSSCCTTB
T ss_pred ccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcc-cCcHHHHHHHHHhCCCEEEECCCCCcCc
Confidence 346688899999999999999887666666678899999862279998854 678888888999999999974 1
Q ss_pred cC-------CCH-HHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhcccCCcEEEeecc
Q 015424 270 AV-------LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNR 318 (407)
Q Consensus 270 ai-------L~~-~~L~~Li~~a~~LGL~aLV--EVht~eElerAl~l~Ga~iIGINnR 318 (407)
.- .+. ..+.++.+.++..++.++. -+.+.+++.+++.+ ||+.+.+-..
T Consensus 308 ~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~-GAd~V~iGs~ 365 (496)
T 4fxs_A 308 TTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAA-GASCVMVGSM 365 (496)
T ss_dssp CHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEESTT
T ss_pred ccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHc-CCCeEEecHH
Confidence 10 112 2344555556677999999 49999999999998 9999998654
No 143
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.44 E-value=0.00071 Score=70.19 Aligned_cols=121 Identities=16% Similarity=0.140 Sum_probs=92.9
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEe------c
Q 015424 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLI------A 269 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLi------a 269 (407)
..+..+.|+.+.++|++.|.+.+-..+..+..+.++.+|+...++||+.++ +.+..+...+..+|||+|.+. +
T Consensus 227 ~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~-v~t~e~a~~l~~aGaD~I~vg~g~Gs~~ 305 (490)
T 4avf_A 227 GADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN-IATAEAAKALAEAGADAVKVGIGPGSIC 305 (490)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEE-ECSHHHHHHHHHTTCSEEEECSSCSTTC
T ss_pred ccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEee-eCcHHHHHHHHHcCCCEEEECCCCCcCC
Confidence 347788999999999999999887766666678899999862278999965 578888888999999999983 1
Q ss_pred cC-------CCH-HHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhcccCCcEEEeecc
Q 015424 270 AV-------LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNR 318 (407)
Q Consensus 270 ai-------L~~-~~L~~Li~~a~~LGL~aLV--EVht~eElerAl~l~Ga~iIGINnR 318 (407)
.- .++ ..+.++.+.++..++.++. -+.+.+++.+++.+ ||+.+.+-..
T Consensus 306 ~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~-GAd~V~vGs~ 363 (490)
T 4avf_A 306 TTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVA-GAYCVMMGSM 363 (490)
T ss_dssp HHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHH-TCSEEEECTT
T ss_pred CccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHc-CCCeeeecHH
Confidence 10 111 1234444444466899999 58999999999998 9999998654
No 144
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.40 E-value=0.00034 Score=68.55 Aligned_cols=77 Identities=21% Similarity=0.296 Sum_probs=61.8
Q ss_pred cEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHH
Q 015424 290 TALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDD 369 (407)
Q Consensus 290 ~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD 369 (407)
.+.|||+|.+|+..++++ |+++|++-|-++ +...++.+. + ...+.+.+.||| +++.
T Consensus 210 kI~vev~tlee~~eA~~a-GaD~I~ld~~~~----------------e~l~~~v~~-----~-~~~~~I~ASGGI-t~~~ 265 (296)
T 1qap_A 210 PVEVEVENLDELDDALKA-GADIIMLDNFNT----------------DQMREAVKR-----V-NGQARLEVSGNV-TAET 265 (296)
T ss_dssp CEEEEESSHHHHHHHHHT-TCSEEEESSCCH----------------HHHHHHHHT-----T-CTTCCEEECCCS-CHHH
T ss_pred cEEEEeCCHHHHHHHHHc-CCCEEEECCCCH----------------HHHHHHHHH-----h-CCCCeEEEECCC-CHHH
Confidence 689999999999999997 999999965333 334444443 2 235789999999 9999
Q ss_pred HHHHHHcCCCEEEEcccccCC
Q 015424 370 IAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 370 ~~~l~~~GadaVLVGeaLmk~ 390 (407)
+..+.+.|+|.+-||+.+...
T Consensus 266 i~~~a~~GvD~isvGsli~~a 286 (296)
T 1qap_A 266 LREFAETGVDFISVGALTKHV 286 (296)
T ss_dssp HHHHHHTTCSEEECSHHHHEE
T ss_pred HHHHHHcCCCEEEEeHHHcCC
Confidence 999999999999999866443
No 145
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=97.40 E-value=0.0019 Score=64.10 Aligned_cols=137 Identities=15% Similarity=0.128 Sum_probs=89.4
Q ss_pred HHHHHcCCCEEEEeccC-------C-------CH-------H---HHHHHHHHHHH-cC--CcEEEEeC---------CH
Q 015424 255 YYARTKGADAVLLIAAV-------L-------PD-------L---DIRYMTKICKL-LG--LTALVEVH---------DE 298 (407)
Q Consensus 255 ~eAr~~GADaVLLiaai-------L-------~~-------~---~L~~Li~~a~~-LG--L~aLVEVh---------t~ 298 (407)
..|.++|.|+|=|.++- | +| . -+.++++.+++ .| ..+.|-++ +.
T Consensus 159 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~ 238 (349)
T 3hgj_A 159 RRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSL 238 (349)
T ss_dssp HHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCH
T ss_pred HHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCH
Confidence 34678999999998763 1 11 1 13345555444 44 44566555 34
Q ss_pred HH----HHHHhcccCCcEEEeeccccccccccccc--cccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHH
Q 015424 299 RE----MDRVLGIEGIELIGINNRNLAISIFSYRT--ETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAY 372 (407)
Q Consensus 299 eE----lerAl~l~Ga~iIGINnRdL~~~~~~~t~--~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~ 372 (407)
+| ++...++ |+++|-+.+... .+... .....+++...++.+. .++++++.|||.|++++.+
T Consensus 239 ~~~~~la~~L~~~-Gvd~i~vs~g~~----~~~~~~~~~~~~~~~~~~~ir~~--------~~iPVi~~Ggi~t~e~a~~ 305 (349)
T 3hgj_A 239 EDTLAFARRLKEL-GVDLLDCSSGGV----VLRVRIPLAPGFQVPFADAVRKR--------VGLRTGAVGLITTPEQAET 305 (349)
T ss_dssp HHHHHHHHHHHHT-TCCEEEEECCCS----CSSSCCCCCTTTTHHHHHHHHHH--------HCCEEEECSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHc-CCCEEEEecCCc----CcccccCCCccccHHHHHHHHHH--------cCceEEEECCCCCHHHHHH
Confidence 55 2333344 899999875322 00000 0011344445555443 2579999999999999999
Q ss_pred HHHcC-CCEEEEcccccCCCChHHHHHhhhcCc
Q 015424 373 VQEAG-VKAVLVGESIVKQDDPGKGITGLFGKD 404 (407)
Q Consensus 373 l~~~G-adaVLVGeaLmk~~dp~~~i~~L~~~~ 404 (407)
+.+.| ||.|.+|.+++..+|...++++-++.+
T Consensus 306 ~l~~G~aD~V~iGR~~lanPdl~~k~~~~l~~~ 338 (349)
T 3hgj_A 306 LLQAGSADLVLLGRVLLRDPYFPLRAAKALGVA 338 (349)
T ss_dssp HHHTTSCSEEEESTHHHHCTTHHHHHHHHTTCC
T ss_pred HHHCCCceEEEecHHHHhCchHHHHHHHHCCCC
Confidence 99999 999999999999999988888777654
No 146
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.39 E-value=0.00064 Score=63.69 Aligned_cols=93 Identities=20% Similarity=0.122 Sum_probs=63.5
Q ss_pred CCHHHHHHHHHHcCCcEEEEEe---cCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCC
Q 015424 197 FDPVEIARSYEKGGAACLSILT---DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLT---d~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (407)
.++.+.++.+++.|+..|-+.+ +..+++=+++.++.+++. +++||+.-..|.++.++.++..+|||+|+++.+++.
T Consensus 156 ~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~-~~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~ 234 (266)
T 2w6r_A 156 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 234 (266)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC-
T ss_pred hhHHHHHHHHHHcCCCEEEEEeecCCCCcCCCCHHHHHHHHHH-cCCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHc
Confidence 3688999999999999998742 223444468889999887 899999999999999999999999999999999886
Q ss_pred HH-HHHHHHHHHHHcCCc
Q 015424 274 DL-DIRYMTKICKLLGLT 290 (407)
Q Consensus 274 ~~-~L~~Li~~a~~LGL~ 290 (407)
.. .+.++.+...+.|+.
T Consensus 235 ~~~~~~~~~~~l~~~g~~ 252 (266)
T 2w6r_A 235 REIDMRELKEYLKKHGVN 252 (266)
T ss_dssp ------------------
T ss_pred CCCCHHHHHHHHHHCCCc
Confidence 54 566677766666664
No 147
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.39 E-value=0.001 Score=68.85 Aligned_cols=121 Identities=8% Similarity=0.080 Sum_probs=91.0
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCCCEEEEecc---C-
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---V- 271 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa---i- 271 (407)
.+..+.|+.+.++|+++|.+.+-..+-....+.++.+|+. + ++||+.|+. .+..++..+..+|||+|.+... .
T Consensus 254 ~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~-~~~~pvi~~~v-~t~~~a~~l~~aGad~I~vg~~~G~~~ 331 (514)
T 1jcn_A 254 EDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK-YPHLQVIGGNV-VTAAQAKNLIDAGVDGLRVGMGCGSIC 331 (514)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH-CTTCEEEEEEE-CSHHHHHHHHHHTCSEEEECSSCSCCB
T ss_pred hhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh-CCCCceEeccc-chHHHHHHHHHcCCCEEEECCCCCccc
Confidence 4578888999999999999966432222234778888886 6 899998874 6777888889999999988320 1
Q ss_pred -------C---CHHHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhcccCCcEEEeecccc
Q 015424 272 -------L---PDLDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNL 320 (407)
Q Consensus 272 -------L---~~~~L~~Li~~a~~LGL~aLV--EVht~eElerAl~l~Ga~iIGINnRdL 320 (407)
. ....+..+.+.++..++.++. -+.+..++.+++.+ ||+.+++-..=+
T Consensus 332 ~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~-GAd~V~iG~~~l 391 (514)
T 1jcn_A 332 ITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALAL-GASTVMMGSLLA 391 (514)
T ss_dssp TTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEESTTTT
T ss_pred ccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHc-CCCeeeECHHHH
Confidence 1 123455555666667999888 78899999999998 999999965544
No 148
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.36 E-value=0.0012 Score=67.84 Aligned_cols=119 Identities=16% Similarity=0.225 Sum_probs=90.4
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCCCEEEEeccC----
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV---- 271 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai---- 271 (407)
.+..+.+..+.++|+++|.+.+-..++.+.++.++.+|+. + ++||+.++ +.+..+...+..+|||+|.+...-
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~-~p~~pvi~g~-~~t~e~a~~l~~~G~d~I~v~~~~G~~~ 313 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD-YPDLPVVAGN-VATPEGTEALIKAGADAVKVGVGPGSIC 313 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH-CTTSCEEEEE-ECSHHHHHHHHHTTCSEEEECSSCSTTC
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH-CCCceEEeCC-cCCHHHHHHHHHcCCCEEEEcCCCCccc
Confidence 4667889999999999999966555555677889999986 5 79998864 678888888899999999983210
Q ss_pred ---------CCHH-HHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhcccCCcEEEeecc
Q 015424 272 ---------LPDL-DIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNR 318 (407)
Q Consensus 272 ---------L~~~-~L~~Li~~a~~LGL~aLV--EVht~eElerAl~l~Ga~iIGINnR 318 (407)
.+.. -+.++.+.++..++.+++ -+.+..++.+++.+ ||+.+++-..
T Consensus 314 ~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~-GAd~V~iGr~ 371 (494)
T 1vrd_A 314 TTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAA-GAESVMVGSI 371 (494)
T ss_dssp HHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHT-TCSEEEESHH
T ss_pred cccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHc-CCCEEEECHH
Confidence 2222 233344444446899999 78899999999998 9999998533
No 149
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.36 E-value=0.0012 Score=73.77 Aligned_cols=161 Identities=8% Similarity=0.011 Sum_probs=94.2
Q ss_pred HHHHHhcCCCCcEEecc-ccCCHHHH----HHHHHcCCCEEEEeccC--------------CCHHHHHHHHHHHHH-cCC
Q 015424 230 LEAVRSAGVKCPLLCKE-FIVDAWQI----YYARTKGADAVLLIAAV--------------LPDLDIRYMTKICKL-LGL 289 (407)
Q Consensus 230 L~~Vr~a~v~lPVL~KD-FIid~~QI----~eAr~~GADaVLLiaai--------------L~~~~L~~Li~~a~~-LGL 289 (407)
+..+++...+.|++..= +.-++.+. ..+..+|+|+|-|.... -+...+.++++..++ .++
T Consensus 625 i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~ 704 (1025)
T 1gte_A 625 VTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQI 704 (1025)
T ss_dssp HHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCC
Confidence 45566531256765321 12233322 22446899999997642 133456677777765 477
Q ss_pred cEEEEeC----CHHH-HHHHhcccCCcEEEeecccccc---------------cc----ccccccccccCchhHHHHhhc
Q 015424 290 TALVEVH----DERE-MDRVLGIEGIELIGINNRNLAI---------------SI----FSYRTETFEVDNSNTKKLLEG 345 (407)
Q Consensus 290 ~aLVEVh----t~eE-lerAl~l~Ga~iIGINnRdL~~---------------~~----~~~t~~Tf~vDl~~t~~L~~~ 345 (407)
.++|-+. +..+ ++.+.+. |++.|-+.|.-... ++ .+++ -..+...+.+++..
T Consensus 705 Pv~vK~~~~~~~~~~~a~~~~~~-G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~s---g~~~~~~~~~~v~~ 780 (1025)
T 1gte_A 705 PFFAKLTPNVTDIVSIARAAKEG-GADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVS---GTAIRPIALRAVTT 780 (1025)
T ss_dssp CEEEEECSCSSCHHHHHHHHHHH-TCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEE---SGGGHHHHHHHHHH
T ss_pred ceEEEeCCChHHHHHHHHHHHHc-CCCEEEEeccccccccccccccccccccccccccCCCCC---cccchhHHHHHHHH
Confidence 7777443 4445 4555665 99999885532100 00 0010 01121111222222
Q ss_pred ccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC-CCChHHHH
Q 015424 346 ERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK-QDDPGKGI 397 (407)
Q Consensus 346 ~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk-~~dp~~~i 397 (407)
+... + .++++|+.|||.|.+|+.++..+||++|.||.+++. +++..+.+
T Consensus 781 v~~~-~--~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~~~~~~~~~~ 830 (1025)
T 1gte_A 781 IARA-L--PGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQDY 830 (1025)
T ss_dssp HHHH-S--TTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSCTTHHHHH
T ss_pred HHHH-c--CCCCEEEecCcCCHHHHHHHHHcCCCEEEEeeccccCCccHHHHH
Confidence 2211 2 258999999999999999999999999999999996 66554433
No 150
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=97.35 E-value=0.00032 Score=67.73 Aligned_cols=198 Identities=14% Similarity=0.049 Sum_probs=127.2
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCC-cEEEEEecCCcCCCCHHHHHHHHhcCC--CCcEEeccc-----
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEF----- 247 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA-~aISVLTd~~~F~Gs~edL~~Vr~a~v--~lPVL~KDF----- 247 (407)
++-|++..|=.. + .....++++.+...-. ..+-|+.-|. +-+|..+++. + ++.|=..|.
T Consensus 4 ~~~i~gNwKmn~-~------~~~~~~l~~~l~~~~~~~~vev~v~Pp-----~~~L~~v~~~-~~~~i~vgAQn~~~~~~ 70 (259)
T 2i9e_A 4 KFVVGGNWKMNG-D------KKQINEIIGFLKSGPLNQDTEVVVGVP-----AIYLELVRTC-VPASIGVAAQNCYKVPK 70 (259)
T ss_dssp CEEEEEECCBCC-C------HHHHHHHHHHHHHSCCCTTEEEEEEEC-----GGGHHHHHHH-SCTTSEEEESCCCSSSS
T ss_pred CcEEEEeccccc-C------HHHHHHHHHHHhhhcccCCeeEEEeCC-----HHHHHHHHHH-hhCCCeEEeccCCCCCC
Confidence 345666666541 1 1245566666654211 2244544443 6688888764 3 466666552
Q ss_pred -----cCCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCCHHH--------------HH
Q 015424 248 -----IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHDERE--------------MD 302 (407)
Q Consensus 248 -----Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht~eE--------------le 302 (407)
=+.+.++ +++||+.|+|+.+ .+ +++.+..=++.|.+.||.++++|-...| ++
T Consensus 71 GA~TGEiS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIvCvGEtleere~g~t~~vv~~Ql~ 147 (259)
T 2i9e_A 71 GAFTGEISPAMI---KDVGADWVILGHSERRQIFGESDELIAEKVCHALESGLKVIACIGETLEEREAGKTEEVVFRQTK 147 (259)
T ss_dssp BSCTTCCCHHHH---HHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHH
T ss_pred CCccCccCHHHH---HHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHH
Confidence 1555554 5679999999998 33 5667777888889999999999997655 66
Q ss_pred HHh----cccCCcEEEeeccccccccccccccccccCchhHHHHhhcccc-------cccccCCceEEEeeCCCCHHHHH
Q 015424 303 RVL----GIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERG-------EIIRQKNIIVVGESGLFTPDDIA 371 (407)
Q Consensus 303 rAl----~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~-------~~i~~~~v~vVAESGI~t~eD~~ 371 (407)
.++ .+ ...+|....-=.||||..- +.+...+....+|. ..+ ..++.++..|+++.-....
T Consensus 148 ~~l~~~~~~-~~~vIAYEPvWAIGTG~~A-------tpe~aqevh~~IR~~l~~~~~~~v-a~~vrIlYGGSV~~~N~~~ 218 (259)
T 2i9e_A 148 AIAAKVNDW-SNVVIAYEPVWAIGTGKTA-------TPQQAQDVHKALRQWICENIDAKV-GNSIRIQYGGSVTAANCKE 218 (259)
T ss_dssp HHHHHCSCC-TTEEEEECCGGGTTSSSCC-------CHHHHHHHHHHHHHHHHHHTCHHH-HHHCEEEECSCCCTTTHHH
T ss_pred HHHhcchhh-cCEEEEEcCHHHcCCCCCC-------CHHHHHHHHHHHHHHHHHhcChhh-cccccEEEcCCCCHhhHHH
Confidence 666 33 3458888877776655321 22233332222221 001 1247889999997777777
Q ss_pred HHHHcCCCEEEEcccccCCCChHHHHH
Q 015424 372 YVQEAGVKAVLVGESIVKQDDPGKGIT 398 (407)
Q Consensus 372 ~l~~~GadaVLVGeaLmk~~dp~~~i~ 398 (407)
.+...++||+|||.+-+++++..+.++
T Consensus 219 l~~~~diDG~LVGgAsL~a~~F~~Ii~ 245 (259)
T 2i9e_A 219 LASQPDIDGFLVGGASLKPEFVDIINA 245 (259)
T ss_dssp HHTSTTCCEEEESGGGGSTHHHHHHTT
T ss_pred HhcCCCCCeeeechHhhChHHHHHHHH
Confidence 777889999999999999988766554
No 151
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.33 E-value=0.0007 Score=62.83 Aligned_cols=93 Identities=18% Similarity=0.073 Sum_probs=76.2
Q ss_pred CCHHHHHHHHHHcCCcEEEEEe---cCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCC
Q 015424 197 FDPVEIARSYEKGGAACLSILT---DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLT---d~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (407)
.++.+.++.+++.||..|-+.+ +..+++=+++.++.+++. +++||+.-..|.++.++.+...+|||+|+++.+++.
T Consensus 152 ~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~-~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~ 230 (252)
T 1ka9_F 152 LHAVEWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEA-VGVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHF 230 (252)
T ss_dssp EEHHHHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred CcHHHHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHH-cCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHc
Confidence 4688999999999999887752 223333368899999987 899999999999999999999999999999988886
Q ss_pred HH-HHHHHHHHHHHcCCc
Q 015424 274 DL-DIRYMTKICKLLGLT 290 (407)
Q Consensus 274 ~~-~L~~Li~~a~~LGL~ 290 (407)
.. ++.++.+.+.+.|+.
T Consensus 231 ~~~~~~~~~~~l~~~~~~ 248 (252)
T 1ka9_F 231 GEIPIPKLKRYLAEKGVH 248 (252)
T ss_dssp TSSCHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHCCCC
Confidence 54 778888887777775
No 152
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=97.32 E-value=0.0017 Score=64.04 Aligned_cols=170 Identities=12% Similarity=0.142 Sum_probs=107.4
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE---ecc------c----cCCHHHHHHHHHcCCCE
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL---CKE------F----IVDAWQIYYARTKGADA 264 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL---~KD------F----Iid~~QI~eAr~~GADa 264 (407)
+...+..+..++|++++-+. .|=.+|+..+-.. ..--++ ..+ | -+.-|.+.+|..+|||+
T Consensus 72 ~l~~~~~~~~~~Gvdavl~~------~gi~~d~~Li~~L-~~~tv~gs~~~ggl~g~~~~~d~~~~~~sVe~AvrlGADa 144 (307)
T 3fok_A 72 LLERMAIALSRPGVDGVLGT------PDIIDDLAALGLL-DDKIVVGSMNRGGLRGASFEMDDRYTGYNVSSMVDRGVDF 144 (307)
T ss_dssp HHHHHHHHHHSTTCCEEEEC------HHHHHHHHHTTCC-TTCEEEEECCCCSCTTCTTTTSCCCCSCCHHHHHHHTCCE
T ss_pred HHHHHHHHHhccCCCEEEEC------cchhhcccceEEe-cCcccccccCccccccCCCCccccccccCHHHHHHCCCCE
Confidence 35566666789999998763 2334566555432 112222 121 1 12225788899999999
Q ss_pred EEEeccCC--CH------HHHHHHHHHHHHcCCcEEEE--e-----------CCHHHHH----HHhcccCCc----EEEe
Q 015424 265 VLLIAAVL--PD------LDIRYMTKICKLLGLTALVE--V-----------HDEREMD----RVLGIEGIE----LIGI 315 (407)
Q Consensus 265 VLLiaaiL--~~------~~L~~Li~~a~~LGL~aLVE--V-----------ht~eEle----rAl~l~Ga~----iIGI 315 (407)
|-+...+- ++ +++.++.+.|+++||-+|+| + ++.+-+. .+.++ |++ +|=+
T Consensus 145 V~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaEL-GADs~~tivK~ 223 (307)
T 3fok_A 145 AKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGL-GNDSSYTWMKL 223 (307)
T ss_dssp EEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTC-SSCCSSEEEEE
T ss_pred EEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHh-CCCcCCCEEEe
Confidence 77543332 11 35666777788899999998 3 3444443 34566 888 8777
Q ss_pred eccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCC--HHH----HHHHHH-cCCCEEEEccccc
Q 015424 316 NNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFT--PDD----IAYVQE-AGVKAVLVGESIV 388 (407)
Q Consensus 316 NnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t--~eD----~~~l~~-~GadaVLVGeaLm 388 (407)
+ + + +.+.++.+. ..+++|..||=++ +++ ++..++ .|+.|+.+|..+.
T Consensus 224 ~---y----------~-----e~f~~Vv~a--------~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIf 277 (307)
T 3fok_A 224 P---V----------V-----EEMERVMES--------TTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLL 277 (307)
T ss_dssp E---C----------C-----TTHHHHGGG--------CSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTS
T ss_pred C---C----------c-----HHHHHHHHh--------CCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhc
Confidence 3 2 1 235666654 2356666677653 333 455667 6999999999999
Q ss_pred C--CCChHHHHHhhh
Q 015424 389 K--QDDPGKGITGLF 401 (407)
Q Consensus 389 k--~~dp~~~i~~L~ 401 (407)
. .+||.+.++.+.
T Consensus 278 Q~~~~dp~~~v~al~ 292 (307)
T 3fok_A 278 YPQDGDVAAAVDTAA 292 (307)
T ss_dssp SCSSSCHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHH
Confidence 9 899998877764
No 153
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.31 E-value=0.00077 Score=62.57 Aligned_cols=92 Identities=21% Similarity=0.122 Sum_probs=75.3
Q ss_pred CHHHHHHHHHHcCCcEEEEEe-c--CCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCH
Q 015424 198 DPVEIARSYEKGGAACLSILT-D--EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLT-d--~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~ 274 (407)
++.+.++.+++.|+..|-+.+ . ..+++=+++.++.+++. +++||+.-..|.++.++.++..+|||+|+++.+++..
T Consensus 152 ~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~-~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~~ 230 (253)
T 1thf_D 152 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFR 230 (253)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTT
T ss_pred CHHHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHcC
Confidence 688999999999999888753 2 22233368888999886 7999999988898999999999999999999888865
Q ss_pred H-HHHHHHHHHHHcCCc
Q 015424 275 L-DIRYMTKICKLLGLT 290 (407)
Q Consensus 275 ~-~L~~Li~~a~~LGL~ 290 (407)
. ++.+..+..++.|+.
T Consensus 231 ~~~~~~~~~~l~~~g~~ 247 (253)
T 1thf_D 231 EIDVRELKEYLKKHGVN 247 (253)
T ss_dssp CSCHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHcCCc
Confidence 4 688888888888875
No 154
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.27 E-value=0.002 Score=67.14 Aligned_cols=121 Identities=12% Similarity=0.168 Sum_probs=94.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEecc---C-
Q 015424 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---V- 271 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa---i- 271 (407)
..+..+.++++.++|+++|.|.+...++.+-.+.++.+|+...++||+.++. .+..+...+..+|||+|.+... +
T Consensus 254 ~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v-~t~e~a~~~~~aGad~i~vg~g~gsi~ 332 (511)
T 3usb_A 254 TADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNV-ATAEATKALIEAGANVVKVGIGPGSIC 332 (511)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEE-CSHHHHHHHHHHTCSEEEECSSCSTTC
T ss_pred ccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeee-ccHHHHHHHHHhCCCEEEECCCCcccc
Confidence 3467788999999999999999887777777788999987633689999884 6777888889999999987321 1
Q ss_pred ---------CCH-HHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhcccCCcEEEeecc
Q 015424 272 ---------LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNR 318 (407)
Q Consensus 272 ---------L~~-~~L~~Li~~a~~LGL~aLV--EVht~eElerAl~l~Ga~iIGINnR 318 (407)
.+. ..+.++.+.++.+++.+++ -+.+.+++.+|+.+ ||+.+.+-..
T Consensus 333 ~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~-GA~~V~vGs~ 390 (511)
T 3usb_A 333 TTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAA-GAHVVMLGSM 390 (511)
T ss_dssp CHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHT-TCSEEEESTT
T ss_pred ccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHh-CchhheecHH
Confidence 122 2344455566778999888 68899999999998 9999998654
No 155
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=97.26 E-value=0.00018 Score=67.97 Aligned_cols=188 Identities=10% Similarity=0.057 Sum_probs=106.7
Q ss_pred CHHHHHHHHHHcC--CcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHH---HHHHHHHcCCCEEEEeccCC
Q 015424 198 DPVEIARSYEKGG--AACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAW---QIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 198 dp~~iA~ay~~~G--A~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~---QI~eAr~~GADaVLLiaaiL 272 (407)
+..+..+..++.| +.++=+-+|= |+.-++.-++.+|+.+..+++=+|=.-++.. -++.+..+|||+|.+-...
T Consensus 25 ~l~~~~~~~~~~~~~v~~~Kv~~d~-~~~~G~~~v~~lr~~~~~v~lD~kl~Dip~t~~~~i~~~~~~Gad~vTvH~~~- 102 (245)
T 1eix_A 25 NRDDALAFVDKIDPRDCRLKVGKEM-FTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG- 102 (245)
T ss_dssp SHHHHHHHHTTSCTTTCEEEEEHHH-HHHHHHHHHHHHHHTTCCEEEEEEECSCHHHHHHHHHHHHHHTCSEEEEBGGG-
T ss_pred CHHHHHHHHHHhCccCcEEEEcHHH-HHHhCHHHHHHHHHCCCcEEEEeeccccHHHHHHHHHHHHhCCCCEEEEeccC-
Confidence 5556556666667 6773343332 4445677788888752333332332213222 3556778999999986654
Q ss_pred CHHHHHHHHHHHHHcCC-cE-EEEe----CC-HHHHHHHh-cccCCcEE---EeeccccccccccccccccccCchhHHH
Q 015424 273 PDLDIRYMTKICKLLGL-TA-LVEV----HD-EREMDRVL-GIEGIELI---GINNRNLAISIFSYRTETFEVDNSNTKK 341 (407)
Q Consensus 273 ~~~~L~~Li~~a~~LGL-~a-LVEV----ht-~eElerAl-~l~Ga~iI---GINnRdL~~~~~~~t~~Tf~vDl~~t~~ 341 (407)
....+..+++.+++.|+ .+ ++-| +. .++++... .+.-.+.| +..+.+. |. ..|-+......+
T Consensus 103 g~~~l~~~~~~~~~~G~~~~~~l~v~~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~-----G~--~g~V~~~~ei~~ 175 (245)
T 1eix_A 103 GARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKC-----GL--DGVVCSAQEAVR 175 (245)
T ss_dssp CHHHHHHHHHTTGGGGGGCCEEEEECSCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHT-----TC--SEEECCGGGHHH
T ss_pred CHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHc-----CC--CeEEeCHHHHHH
Confidence 34448888998888887 33 3322 22 24443210 00001111 1112221 11 112222222344
Q ss_pred HhhcccccccccCCceEEEeeCCCCHH-----------HHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 342 LLEGERGEIIRQKNIIVVGESGLFTPD-----------DIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 342 L~~~~~~~~i~~~~v~vVAESGI~t~e-----------D~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
|.+. + + +..++.-+||+. + .+..+.++|+|.++||++|++++||.++++++..
T Consensus 176 lr~~-----~-~-~~~i~v~gGI~~-~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~ 239 (245)
T 1eix_A 176 FKQV-----F-G-QEFKLVTPGIRP-QGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINA 239 (245)
T ss_dssp HHHH-----H-C-SSSEEEECCBCC-TTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred HHHh-----c-C-CCCEEEECCcCC-CCCCccchhccCCHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHH
Confidence 4432 1 2 236777899953 3 4677789999999999999999999999988854
No 156
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.22 E-value=0.0012 Score=60.39 Aligned_cols=93 Identities=25% Similarity=0.273 Sum_probs=74.2
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCC-cC-CC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCC
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEK-YF-KG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~-~F-~G-s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (407)
.++.+.++.+.+.||+.|-+..-.. .. +| +++.++.+++. +++||+.-..|.++.++.++..+|||+|++..+++.
T Consensus 154 ~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~-~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 154 LDAVKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADS-VRIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred CCHHHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHh-cCCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHc
Confidence 4788999999999999998753221 11 12 57888888886 799999988888889999999999999999988775
Q ss_pred H-HHHHHHHHHHHHcCCc
Q 015424 274 D-LDIRYMTKICKLLGLT 290 (407)
Q Consensus 274 ~-~~L~~Li~~a~~LGL~ 290 (407)
. ..+.++.+..++.|++
T Consensus 233 ~~~~~~~~~~~l~~~g~~ 250 (253)
T 1h5y_A 233 RVLSIAQVKRYLKERGVE 250 (253)
T ss_dssp TSSCHHHHHHHHHHTTCB
T ss_pred CCCCHHHHHHHHHHcCCC
Confidence 4 3577888888888875
No 157
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=97.20 E-value=0.0015 Score=64.86 Aligned_cols=86 Identities=21% Similarity=0.296 Sum_probs=65.3
Q ss_pred HHHHHHHHHc--CCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCC
Q 015424 278 RYMTKICKLL--GLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKN 355 (407)
Q Consensus 278 ~~Li~~a~~L--GL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~ 355 (407)
...++.+++. .....|||.|.+|++.|+++ |+++|.+.|-++ +...+.++.+ ...
T Consensus 219 ~~Av~~ar~~~p~~kIeVEVdtldea~eAl~a-GaD~I~LDn~~~----------------~~l~~av~~l------~~~ 275 (320)
T 3paj_A 219 RQAISTAKQLNPGKPVEVETETLAELEEAISA-GADIIMLDNFSL----------------EMMREAVKIN------AGR 275 (320)
T ss_dssp HHHHHHHHHHSTTSCEEEEESSHHHHHHHHHT-TCSEEEEESCCH----------------HHHHHHHHHH------TTS
T ss_pred HHHHHHHHHhCCCCeEEEEECCHHHHHHHHHc-CCCEEEECCCCH----------------HHHHHHHHHh------CCC
Confidence 3344555543 46678999999999999997 999999966443 3334444432 236
Q ss_pred ceEEEeeCCCCHHHHHHHHHcCCCEEEEcccc
Q 015424 356 IIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 387 (407)
Q Consensus 356 v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 387 (407)
+.+.+.||| +++.+..+.+.|+|.+-||...
T Consensus 276 v~ieaSGGI-t~~~I~~~a~tGVD~isvGalt 306 (320)
T 3paj_A 276 AALENSGNI-TLDNLKECAETGVDYISVGALT 306 (320)
T ss_dssp SEEEEESSC-CHHHHHHHHTTTCSEEECTHHH
T ss_pred CeEEEECCC-CHHHHHHHHHcCCCEEEECcee
Confidence 789999999 8999999999999999999743
No 158
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=97.19 E-value=0.0014 Score=64.56 Aligned_cols=86 Identities=12% Similarity=0.157 Sum_probs=65.8
Q ss_pred HHHHHHHHHc--CCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCC
Q 015424 278 RYMTKICKLL--GLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKN 355 (407)
Q Consensus 278 ~~Li~~a~~L--GL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~ 355 (407)
...++.+++. .+..-|||.|.+|++.|+++ |+++|-..|-+. +...+.++.+ ...
T Consensus 195 ~~Av~~ar~~~p~~kIeVEv~tl~e~~eAl~a-GaDiImLDn~s~----------------~~l~~av~~~------~~~ 251 (300)
T 3l0g_A 195 TLAIQRLRKNLKNEYIAIECDNISQVEESLSN-NVDMILLDNMSI----------------SEIKKAVDIV------NGK 251 (300)
T ss_dssp HHHHHHHHHHSSSCCEEEEESSHHHHHHHHHT-TCSEEEEESCCH----------------HHHHHHHHHH------TTS
T ss_pred HHHHHHHHHhCCCCCEEEEECCHHHHHHHHHc-CCCEEEECCCCH----------------HHHHHHHHhh------cCc
Confidence 3445555543 67889999999999999997 999999965433 3344444432 235
Q ss_pred ceEEEeeCCCCHHHHHHHHHcCCCEEEEcccc
Q 015424 356 IIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 387 (407)
Q Consensus 356 v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 387 (407)
+.+-+.||| |++.+..+.+.|+|.+-||.-.
T Consensus 252 v~leaSGGI-t~~~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 252 SVLEVSGCV-NIRNVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp SEEEEESSC-CTTTHHHHHTTTCSEEECGGGT
T ss_pred eEEEEECCC-CHHHHHHHHHcCCCEEEeCccc
Confidence 788899999 9999999999999999999543
No 159
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.18 E-value=0.002 Score=62.26 Aligned_cols=159 Identities=19% Similarity=0.170 Sum_probs=97.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhc--CCCCcEEe-cccc--C-C----HHHHHHHHHcCCCEEE
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLC-KEFI--V-D----AWQIYYARTKGADAVL 266 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a--~v~lPVL~-KDFI--i-d----~~QI~eAr~~GADaVL 266 (407)
.++.+++....++|+.++-|. +..+..+++. +.++.|-. =+|= - + -+++.+|...|||.|-
T Consensus 59 ~~I~~lc~eA~~~~~aaVCV~---------p~~V~~a~~~L~gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEID 129 (260)
T 3r12_A 59 DDIKKLCLEARENRFHGVCVN---------PCYVKLAREELEGTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADEID 129 (260)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC---------GGGHHHHHHHHTTSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHhcCCcEEEEC---------HHHHHHHHHHhcCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEE
Confidence 356667777888999888873 5556655532 23443321 1331 1 1 1266778899999987
Q ss_pred EeccC--C-C--H----HHHHHHHHHHHHcCCcEEEEeC--CHHHHHHHhcc---cCCcEEEeecccccccccccccccc
Q 015424 267 LIAAV--L-P--D----LDIRYMTKICKLLGLTALVEVH--DEREMDRVLGI---EGIELIGINNRNLAISIFSYRTETF 332 (407)
Q Consensus 267 Liaai--L-~--~----~~L~~Li~~a~~LGL~aLVEVh--t~eElerAl~l---~Ga~iIGINnRdL~~~~~~~t~~Tf 332 (407)
+..-+ + + . +++..+.+.|...-|.+++|.. |.+|+.+|..+ .||++|=.. |||+....|+
T Consensus 130 mViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTS------TGf~~~GAT~ 203 (260)
T 3r12_A 130 MVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTS------TGFGTGGATA 203 (260)
T ss_dssp EECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECC------CSSSSCCCCH
T ss_pred EEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcC------CCCCCCCCCH
Confidence 65442 2 2 1 2344444444333467788886 67777665432 389988773 4444444443
Q ss_pred ccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCE
Q 015424 333 EVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKA 380 (407)
Q Consensus 333 ~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gada 380 (407)
+ |.....+.. ...+.+-+.|||+|.+|+..+.++||+.
T Consensus 204 e-dV~lm~~~v---------g~~v~VKaAGGIrt~~~al~mi~aGA~R 241 (260)
T 3r12_A 204 E-DVHLMKWIV---------GDEMGVKASGGIRTFEDAVKMIMYGADR 241 (260)
T ss_dssp H-HHHHHHHHH---------CTTSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred H-HHHHHHHHh---------CCCceEEEeCCCCCHHHHHHHHHcCCce
Confidence 2 222222221 2468899999999999999999999994
No 160
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.18 E-value=0.0025 Score=60.44 Aligned_cols=158 Identities=15% Similarity=0.158 Sum_probs=92.8
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhc-CCCCcEEe-ccc--cC-C----HHHHHHHHHcCCCEEEEe
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA-GVKCPLLC-KEF--IV-D----AWQIYYARTKGADAVLLI 268 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a-~v~lPVL~-KDF--Ii-d----~~QI~eAr~~GADaVLLi 268 (407)
+..++++...++|+.++-|. +..+..++.. +.++.|-. =+| .- + -+++.+|...|||.|-+.
T Consensus 30 ~i~~lc~eA~~~~~~aVcV~---------p~~v~~a~~l~~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdEIDmV 100 (231)
T 3ndo_A 30 DVTALVDEAADLGVFAVCVS---------PPLVSVAAGVAPSGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATEIDMV 100 (231)
T ss_dssp HHHHHHHHHHHHTCSEEEEC---------GGGHHHHHHHCCTTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHhCCcEEEEC---------HHHHHHHHHhcCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEE
Confidence 45566777778899888873 4444444411 22333321 133 11 1 136677889999998765
Q ss_pred ccC--C-CH------HHHHHHHHHHHHcCCcEEEEeC------CHHHHHHHhcc---cCCcEEEeecccccccccc-ccc
Q 015424 269 AAV--L-PD------LDIRYMTKICKLLGLTALVEVH------DEREMDRVLGI---EGIELIGINNRNLAISIFS-YRT 329 (407)
Q Consensus 269 aai--L-~~------~~L~~Li~~a~~LGL~aLVEVh------t~eElerAl~l---~Ga~iIGINnRdL~~~~~~-~t~ 329 (407)
.-+ + +. +++..+.+.|+..-|.+++|.. |.+|+.++-.+ .||++|=.. |||+ +..
T Consensus 101 inig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTS------TGf~~~~g 174 (231)
T 3ndo_A 101 IDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTS------TGFHPSGG 174 (231)
T ss_dssp CCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECC------CSCCTTCS
T ss_pred eehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcC------CCCCCCCC
Confidence 442 2 11 2344444444433467788874 55666655432 389888663 3333 333
Q ss_pred cccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCE
Q 015424 330 ETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKA 380 (407)
Q Consensus 330 ~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gada 380 (407)
.|++ |.....+.. ...+.+-+.|||+|.+|+..+.++|++.
T Consensus 175 At~e-dv~lm~~~v---------~~~v~VKaaGGIrt~~~a~~~i~aGa~R 215 (231)
T 3ndo_A 175 ASVQ-AVEIMARTV---------GERLGVKASGGIRTAEQAAAMLDAGATR 215 (231)
T ss_dssp CCHH-HHHHHHHHH---------TTTSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred CCHH-HHHHHHHHh---------CCCceEEEeCCCCCHHHHHHHHHhcchh
Confidence 3432 222222222 2468899999999999999999999994
No 161
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=97.17 E-value=0.0027 Score=65.36 Aligned_cols=45 Identities=22% Similarity=0.242 Sum_probs=38.1
Q ss_pred CCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC-CCChHHHHH
Q 015424 354 KNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK-QDDPGKGIT 398 (407)
Q Consensus 354 ~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk-~~dp~~~i~ 398 (407)
.++++|+.|||.|++|+.++..+|||+|-||++++. .++....++
T Consensus 372 ~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~~gP~l~~~i~ 417 (443)
T 1tv5_A 372 KQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIK 417 (443)
T ss_dssp TCSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHHGGGHHHHHH
T ss_pred CCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcChHHHHHHH
Confidence 368999999999999999999999999999999764 665554443
No 162
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=97.14 E-value=0.0011 Score=63.56 Aligned_cols=184 Identities=10% Similarity=0.004 Sum_probs=114.1
Q ss_pred CHHHHHHHHHH-cCC-cEEEEEecCCcCCCCHHHHHHHHhc--CCCCcEEeccc----------cCCHHHHHHHHHcCCC
Q 015424 198 DPVEIARSYEK-GGA-ACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLCKEF----------IVDAWQIYYARTKGAD 263 (407)
Q Consensus 198 dp~~iA~ay~~-~GA-~aISVLTd~~~F~Gs~edL~~Vr~a--~v~lPVL~KDF----------Iid~~QI~eAr~~GAD 263 (407)
...++++.+.. ... . +-|+.-|. +-+|..+++. +.++.|=..|. =+.+.++ +.+||+
T Consensus 18 ~~~~~~~~l~~~~~~~~-vev~v~Pp-----~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~mL---~d~G~~ 88 (250)
T 1yya_A 18 EARVWFAELKRLLPPLQ-SEAAVLPA-----FPILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSARML---SDLGCR 88 (250)
T ss_dssp HHHHHHHHHHHHCCCCS-SEEEEECC-----GGGHHHHHHHHTTSSCEEEESCCCSSSSBSCTTCCCHHHH---HHTTCS
T ss_pred HHHHHHHHHHhhccccC-ceEEEeCC-----HHHHHHHHHHhcCCCCeEEeccCCCCCCCCccCcCCHHHH---HHcCCC
Confidence 34556666644 111 1 34443443 5677777653 13466655551 1555555 567999
Q ss_pred EEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCCHHH--------------HHHHhcccCCc-----EEEeecc
Q 015424 264 AVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHDERE--------------MDRVLGIEGIE-----LIGINNR 318 (407)
Q Consensus 264 aVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht~eE--------------lerAl~l~Ga~-----iIGINnR 318 (407)
.|+|+++ .+ +++.+..=++.|.+.||.++++|-...| +..+++.-+++ +|....-
T Consensus 89 ~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE~leere~g~t~~vv~~Ql~~~l~~~~~~~~~~vvIAYEPv 168 (250)
T 1yya_A 89 YAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPV 168 (250)
T ss_dssp EEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCSSGGGCEEEECCG
T ss_pred EEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHcCcEEEEECCH
Confidence 9999998 22 5666777778888999999999996543 34444311334 7888777
Q ss_pred ccccccccccccccccCchhHHHHhhccccc---ccc---cCCceEEEeeCCCCHHHHHHHHHc-CCCEEEEcccccCCC
Q 015424 319 NLAISIFSYRTETFEVDNSNTKKLLEGERGE---IIR---QKNIIVVGESGLFTPDDIAYVQEA-GVKAVLVGESIVKQD 391 (407)
Q Consensus 319 dL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~---~i~---~~~v~vVAESGI~t~eD~~~l~~~-GadaVLVGeaLmk~~ 391 (407)
=.||||..- +.+...+....+|.- .+- ...+.++..|+++. +++..+... ++||+|||.+-++++
T Consensus 169 WAIGTG~~A-------tpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~-~N~~~l~~~~diDG~LVGgAsL~a~ 240 (250)
T 1yya_A 169 WAIGTGKNA-------TPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNP-KNFADLLSMPNVDGGLVGGASLELE 240 (250)
T ss_dssp GGSSSSCCC-------CHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCT-TTHHHHHTSTTCCEEEESGGGSSHH
T ss_pred HHhCCCCCC-------CHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCH-HHHHHHHcCCCCCeeEeeHHHhChH
Confidence 666655321 222222222222110 000 13578888888855 999999988 999999999999988
Q ss_pred ChHHHHH
Q 015424 392 DPGKGIT 398 (407)
Q Consensus 392 dp~~~i~ 398 (407)
+..+.++
T Consensus 241 ~F~~ii~ 247 (250)
T 1yya_A 241 SFLALLR 247 (250)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766554
No 163
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=97.11 E-value=0.0043 Score=62.19 Aligned_cols=89 Identities=16% Similarity=0.163 Sum_probs=72.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhccccccc
Q 015424 272 LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEII 351 (407)
Q Consensus 272 L~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i 351 (407)
|+.++++.|.++|+++||..+.|+.|.+.++.+.++ +++++=|-.||+ . |+...+++.+
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~-~v~~~KI~S~~~---------~----n~~LL~~va~------- 146 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFISTLFSRAAALRLQRM-DIPAYKIGSGEC---------N----NYPLIKLVAS------- 146 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHH-TCSCEEECGGGT---------T----CHHHHHHHHT-------
T ss_pred CCHHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhc-CCCEEEECcccc---------c----CHHHHHHHHh-------
Confidence 677899999999999999999999999999999887 899999999998 4 4444444443
Q ss_pred ccCCceEEEeeCCCCHHHHHHH----HHcCCCEEEE
Q 015424 352 RQKNIIVVGESGLFTPDDIAYV----QEAGVKAVLV 383 (407)
Q Consensus 352 ~~~~v~vVAESGI~t~eD~~~l----~~~GadaVLV 383 (407)
.+.++|..-|..|.+++... .+.|.+=+|.
T Consensus 147 --~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 147 --FGKPIILSTGMNSIESIKKSVEIIREAGVPYALL 180 (349)
T ss_dssp --TCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred --cCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 35688889999999997654 4567755554
No 164
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=97.11 E-value=0.0014 Score=63.27 Aligned_cols=73 Identities=23% Similarity=0.143 Sum_probs=62.5
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCC---CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCC
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFK---GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~---Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (407)
..+|+.+++.|++++-.+..+---+ -+++.|+.+++. .++||++...|-+|.++.+|.++|||+|++..++..
T Consensus 146 ~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~-~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 146 PIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEE-AKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAH 221 (265)
T ss_dssp HHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHH-CSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred HHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhc-CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 4589999999999997766652222 278899999986 899999999999999999999999999999998874
No 165
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.10 E-value=0.0065 Score=60.76 Aligned_cols=120 Identities=14% Similarity=0.182 Sum_probs=84.9
Q ss_pred CHHHHHHHHHHcCCcEEEEEecC---CcCC--CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEecc--
Q 015424 198 DPVEIARSYEKGGAACLSILTDE---KYFK--GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA-- 270 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~---~~F~--Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa-- 270 (407)
+..+.++.+.+.|+++|.+-..+ .|++ +..+++..+++. +++||+.|+ +.++.++..+..+|||+|.+...
T Consensus 166 ~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~-~~~pvi~gg-i~t~e~a~~~~~~Gad~i~vg~Gg~ 243 (393)
T 2qr6_A 166 NVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGS-LDVPVIAGG-VNDYTTALHMMRTGAVGIIVGGGEN 243 (393)
T ss_dssp THHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHH-CSSCEEEEC-CCSHHHHHHHHTTTCSEEEESCCSC
T ss_pred cHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHh-cCCCEEECC-cCCHHHHHHHHHcCCCEEEECCCcc
Confidence 56788999989999999764322 2433 267889999987 899999965 68888898999999999999541
Q ss_pred ------CCCHHHHHHHHHHHHH-------cC---CcEEEE--eCCHHHHHHHhcccCCcEEEeecccc
Q 015424 271 ------VLPDLDIRYMTKICKL-------LG---LTALVE--VHDEREMDRVLGIEGIELIGINNRNL 320 (407)
Q Consensus 271 ------iL~~~~L~~Li~~a~~-------LG---L~aLVE--Vht~eElerAl~l~Ga~iIGINnRdL 320 (407)
-.....+..+.+..+. +| +.+++. +++..++.+++.+ ||+.+++-..-+
T Consensus 244 ~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalal-GA~~V~iG~~~l 310 (393)
T 2qr6_A 244 TNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIAC-GADAVVLGSPLA 310 (393)
T ss_dssp CHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHH-TCSEEEECGGGG
T ss_pred cccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHc-CCCEEEECHHHH
Confidence 0011233334333332 56 777774 7899999999998 999999976544
No 166
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=97.09 E-value=0.0039 Score=62.69 Aligned_cols=121 Identities=12% Similarity=0.175 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEe---ccC---
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLI---AAV--- 271 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLi---aai--- 271 (407)
+..+.++...++|++.|+|.|-.....+-.+.++.+|+...++||+.+. +.++.+...+..+|||+|.+. ...
T Consensus 108 ~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~-v~t~e~A~~a~~aGAD~I~vG~gpGs~~~t 186 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN-VATAEGARALIEAGVSAVKVGIGPGSICTT 186 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEE-ECSHHHHHHHHHHTCSEEEECSSCSTTBCH
T ss_pred hHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeee-eCCHHHHHHHHHcCCCEEEEecCCCCCCCc
Confidence 4467889999999999998764333323345567777752378988854 578888999999999999983 111
Q ss_pred -------CCH-HHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhcccCCcEEEeecccc
Q 015424 272 -------LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNL 320 (407)
Q Consensus 272 -------L~~-~~L~~Li~~a~~LGL~aLV--EVht~eElerAl~l~Ga~iIGINnRdL 320 (407)
.+. ..+.++.+.++..++.++. -+.+..++.+++.+ ||+.|++-.+=+
T Consensus 187 r~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~-GAd~V~vGs~f~ 244 (366)
T 4fo4_A 187 RIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAA-GASCVMVGSMFA 244 (366)
T ss_dssp HHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEESTTTT
T ss_pred ccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHc-CCCEEEEChHhh
Confidence 122 1233444444567999999 78899999999998 999999965543
No 167
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=97.08 E-value=0.0045 Score=61.63 Aligned_cols=118 Identities=11% Similarity=0.107 Sum_probs=84.4
Q ss_pred HHHHHHHHHc--CCcEEEEEecCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCCCEEEEecc------
Q 015424 200 VEIARSYEKG--GAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAA------ 270 (407)
Q Consensus 200 ~~iA~ay~~~--GA~aISVLTd~~~F~Gs~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa------ 270 (407)
.+.+....+. |+.+|.+-+-..+..+..+.++.+|+. . ++||+.++ +.++.+...+..+|||+|.+...
T Consensus 120 ~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~-~~~~~vi~g~-v~t~e~A~~a~~aGaD~I~v~~g~G~~~~ 197 (351)
T 2c6q_A 120 FEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKR-FPQHTIMAGN-VVTGEMVEELILSGADIIKVGIGPGSVCT 197 (351)
T ss_dssp HHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHH-CTTSEEEEEE-ECSHHHHHHHHHTTCSEEEECSSCSTTBC
T ss_pred HHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHh-cCCCeEEEEe-CCCHHHHHHHHHhCCCEEEECCCCCcCcC
Confidence 3455666665 899888743222222234678888886 6 79999875 57888899999999999977421
Q ss_pred -------CCCH-HHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhcccCCcEEEeecccc
Q 015424 271 -------VLPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNL 320 (407)
Q Consensus 271 -------iL~~-~~L~~Li~~a~~LGL~aLV--EVht~eElerAl~l~Ga~iIGINnRdL 320 (407)
-.+. .-|.++.+.+...++.++. -+.|..++.+|+.+ ||+.+++-.+=+
T Consensus 198 ~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlal-GA~~V~vG~~fl 256 (351)
T 2c6q_A 198 TRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGA-GADFVMLGGMLA 256 (351)
T ss_dssp HHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHT-TCSEEEESTTTT
T ss_pred ccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHc-CCCceeccHHHh
Confidence 0111 1244555556667899999 79999999999998 999999976554
No 168
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.04 E-value=0.004 Score=63.78 Aligned_cols=118 Identities=18% Similarity=0.169 Sum_probs=90.3
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCCCEEEEec-------
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIA------- 269 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLia------- 269 (407)
+..+.|+.+.+.|+++|.+-+-..+|.+.++.+..+++. + ++||+.+ .+.+......+..+|||+|.+..
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~-~p~~pvi~G-~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~ 310 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAH-FPNRTLIAG-NIATAEGARALYDAGVDVVKVGIGPGSICT 310 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHH-CSSSCEEEE-EECSHHHHHHHHHTTCSEEEECSSCCTTBC
T ss_pred hHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHH-CCCCcEeCC-CccCHHHHHHHHHcCCCEEEECccCCcceE
Confidence 456789999999999999877666666667788888876 6 8999955 45778888889999999998852
Q ss_pred -------cCCCHHHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhcccCCcEEEeecc
Q 015424 270 -------AVLPDLDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNR 318 (407)
Q Consensus 270 -------aiL~~~~L~~Li~~a~~LGL~aLV--EVht~eElerAl~l~Ga~iIGINnR 318 (407)
..-....+.++...+...++.+++ -+++.+++.+++.+ ||+.+++...
T Consensus 311 tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~-GA~~v~vG~~ 367 (491)
T 1zfj_A 311 TRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAA-GGNAVMLGSM 367 (491)
T ss_dssp HHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHT-TCSEEEESTT
T ss_pred EeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHc-CCcceeeCHH
Confidence 011123344555555567888888 57899999999998 9999999543
No 169
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=97.03 E-value=0.0027 Score=60.33 Aligned_cols=138 Identities=7% Similarity=-0.009 Sum_probs=91.6
Q ss_pred CCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHH---------------hcc
Q 015424 249 VDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHDEREMDRV---------------LGI 307 (407)
Q Consensus 249 id~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht~eElerA---------------l~l 307 (407)
+.+.++ +++||+.|+|+++ .+ +++.+..=++.|.+.||.++++|-...|-..+ +..
T Consensus 72 iS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~~~t~~vv~~Ql~~l~~ 148 (233)
T 2jgq_A 72 ITSKHL---EELKIHTLLIGHSERRTLLKESPSFLKEKFDFFKSKNFKIVYCIGEELTTREKGFKAVKEFLSEQLENIDL 148 (233)
T ss_dssp CBHHHH---HHTTCCEEEECCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHCHHHHHHHHHHHHTTSCT
T ss_pred cCHHHH---HHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCchhHHHHHHHHHHhhhh
Confidence 445554 5569999999998 33 56667777788889999999999754332222 111
Q ss_pred c-CCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEccc
Q 015424 308 E-GIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 386 (407)
Q Consensus 308 ~-Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 386 (407)
+ ...+|....-=.||||. ..+.+...+....+|.- + ..++.++..|+++.-.....+...++||+|||.+
T Consensus 149 ~~~~~vIAYEPvWAIGTG~-------~At~e~a~ev~~~IR~~-l-~~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgA 219 (233)
T 2jgq_A 149 NYPNLVVAYEPIWAIGTKK-------SASLEDIYLTHGFLKQI-L-NQKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSA 219 (233)
T ss_dssp TCTTEEEEECCGGGTTC---------CCCHHHHHHHHHHHHHH-S-CTTSCEEEESSCCTTTHHHHHTSTTCCEEEESGG
T ss_pred hccceEEEEeCHHHhCCCC-------CCCHHHHHHHHHHHHHH-H-hcCCcEEEcCCcChhhHHHHhcCCCCCeeEecHH
Confidence 0 23477777666666542 12333444443333321 1 1357899999998777777788889999999999
Q ss_pred ccCCCChHHHHH
Q 015424 387 IVKQDDPGKGIT 398 (407)
Q Consensus 387 Lmk~~dp~~~i~ 398 (407)
-+++++..+.++
T Consensus 220 sl~a~~f~~ii~ 231 (233)
T 2jgq_A 220 SWELENFKTIIS 231 (233)
T ss_dssp GGSHHHHHHHHT
T ss_pred HhChHHHHHHHH
Confidence 999887766554
No 170
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.99 E-value=0.0056 Score=61.25 Aligned_cols=118 Identities=13% Similarity=0.235 Sum_probs=85.3
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEecc---C-----
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---V----- 271 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa---i----- 271 (407)
.+.++.+.++||+.|.+.+-......-.+.++.+|+. .++||+.+. +.++.++..+..+|||+|.+... +
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~-~~~~Vivg~-v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~ 184 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK-MNIDVIVGN-VVTEEATKELIENGADGIKVGIGPGSICTTRI 184 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHH-CCCEEEEEE-ECSHHHHHHHHHTTCSEEEECSSCCTTCCHHH
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHh-cCCcEEEcc-CCCHHHHHHHHHcCcCEEEEecCCCcCCCccc
Confidence 7889999999999998865432111124567777776 689999865 47788888899999999998310 1
Q ss_pred -----CCH-HHHHHHHHHHHHcCCcEEEE--eCCHHHHHHHhcccCCcEEEeecccc
Q 015424 272 -----LPD-LDIRYMTKICKLLGLTALVE--VHDEREMDRVLGIEGIELIGINNRNL 320 (407)
Q Consensus 272 -----L~~-~~L~~Li~~a~~LGL~aLVE--Vht~eElerAl~l~Ga~iIGINnRdL 320 (407)
.+. ..+.++.+.++..++.++.. ++|.+++.+++.+ ||+.|++-..=+
T Consensus 185 ~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~-GAd~V~vGs~~~ 240 (361)
T 3khj_A 185 VAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAV-GASSVMIGSILA 240 (361)
T ss_dssp HTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHH-TCSEEEESTTTT
T ss_pred ccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHc-CCCEEEEChhhh
Confidence 122 22344444456679988884 8899999999998 999999865433
No 171
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=96.97 E-value=0.006 Score=60.95 Aligned_cols=80 Identities=16% Similarity=0.233 Sum_probs=58.9
Q ss_pred HHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcC-CCE
Q 015424 302 DRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAG-VKA 380 (407)
Q Consensus 302 erAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~G-ada 380 (407)
+.+.+. |+++|.+-++.... ....+.+...++.+. -++++|+-||| |++++..+.+.| ||+
T Consensus 258 ~~l~~~-G~d~i~v~~~~~~~--------~~~~~~~~~~~v~~~--------~~iPvi~~Ggi-t~~~a~~~l~~g~aD~ 319 (364)
T 1vyr_A 258 EELAKR-GIAYLHMSETDLAG--------GKPYSEAFRQKVRER--------FHGVIIGAGAY-TAEKAEDLIGKGLIDA 319 (364)
T ss_dssp HHHHHT-TCSEEEEECCBTTB--------CCCCCHHHHHHHHHH--------CCSEEEEESSC-CHHHHHHHHHTTSCSE
T ss_pred HHHHHh-CCCEEEEecCcccC--------CCcccHHHHHHHHHH--------CCCCEEEECCc-CHHHHHHHHHCCCccE
Confidence 333444 99999998765410 011233444444443 35799999999 999999999998 999
Q ss_pred EEEcccccCCCChHHHHHh
Q 015424 381 VLVGESIVKQDDPGKGITG 399 (407)
Q Consensus 381 VLVGeaLmk~~dp~~~i~~ 399 (407)
|.+|.+++..++...++++
T Consensus 320 V~~gR~~l~~P~~~~~~~~ 338 (364)
T 1vyr_A 320 VAFGRDYIANPDLVARLQK 338 (364)
T ss_dssp EEESHHHHHCTTHHHHHHH
T ss_pred EEECHHHHhChhHHHHHHc
Confidence 9999999999999888764
No 172
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=96.96 E-value=0.0059 Score=61.02 Aligned_cols=126 Identities=13% Similarity=0.082 Sum_probs=82.2
Q ss_pred HHHHcCCCEEEEeccC-------C-------CH----------HHHHHHHHHHHH-cCC-cEEEEeC------------C
Q 015424 256 YARTKGADAVLLIAAV-------L-------PD----------LDIRYMTKICKL-LGL-TALVEVH------------D 297 (407)
Q Consensus 256 eAr~~GADaVLLiaai-------L-------~~----------~~L~~Li~~a~~-LGL-~aLVEVh------------t 297 (407)
.|.++|+|+|-|.++- | ++ .-+.++++.+++ .|- .+.|-++ +
T Consensus 169 ~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~ 248 (365)
T 2gou_A 169 NAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADP 248 (365)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSH
T ss_pred HHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCC
Confidence 3578999999997642 1 11 023345555543 443 4455222 3
Q ss_pred HHH----HHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHH
Q 015424 298 ERE----MDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYV 373 (407)
Q Consensus 298 ~eE----lerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l 373 (407)
.++ ++.+.+. |+++|.+.++.+. + ... ...+....+.+. -++++|+-||| +++++.++
T Consensus 249 ~~~~~~~a~~l~~~-G~d~i~v~~~~~~----~--~~~--~~~~~~~~i~~~--------~~iPvi~~Ggi-~~~~a~~~ 310 (365)
T 2gou_A 249 ILTYTAAAALLNKH-RIVYLHIAEVDWD----D--APD--TPVSFKRALREA--------YQGVLIYAGRY-NAEKAEQA 310 (365)
T ss_dssp HHHHHHHHHHHHHT-TCSEEEEECCBTT----B--CCC--CCHHHHHHHHHH--------CCSEEEEESSC-CHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCCEEEEeCCCcC----C--CCC--ccHHHHHHHHHH--------CCCcEEEeCCC-CHHHHHHH
Confidence 334 3344454 9999999877541 0 011 123334444443 25799999999 99999999
Q ss_pred HHcC-CCEEEEcccccCCCChHHHHHh
Q 015424 374 QEAG-VKAVLVGESIVKQDDPGKGITG 399 (407)
Q Consensus 374 ~~~G-adaVLVGeaLmk~~dp~~~i~~ 399 (407)
.+.| ||+|-+|.+++..++....+++
T Consensus 311 l~~g~aD~V~igR~~i~~P~l~~~~~~ 337 (365)
T 2gou_A 311 INDGLADMIGFGRPFIANPDLPERLRH 337 (365)
T ss_dssp HHTTSCSEEECCHHHHHCTTHHHHHHH
T ss_pred HHCCCcceehhcHHHHhCchHHHHHHc
Confidence 9998 9999999999999998888764
No 173
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=96.93 E-value=0.0024 Score=59.11 Aligned_cols=94 Identities=16% Similarity=0.130 Sum_probs=71.2
Q ss_pred CcCCCCCCCCHHHHHHHHHHcCCcEEEEEec---CCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHc---CC
Q 015424 189 SRGILREDFDPVEIARSYEKGGAACLSILTD---EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK---GA 262 (407)
Q Consensus 189 SkG~i~~~~dp~~iA~ay~~~GA~aISVLTd---~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~---GA 262 (407)
..|+.....++.+.++.+++.|+..|-+.+- ..+++-+++.++.+++. +++||+.-..|.++.++.+++.+ ||
T Consensus 138 ~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~-~~ipvia~GGI~~~~d~~~~~~~~~~Ga 216 (244)
T 1vzw_A 138 GRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAA-TDRPVVASGGVSSLDDLRAIAGLVPAGV 216 (244)
T ss_dssp CSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC-------CCCHHHHHHHHHT-CSSCEEEESCCCSHHHHHHHHTTGGGTE
T ss_pred EcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHhhccCCC
Confidence 3455544448999999999999998877642 22233367889999886 79999999999999999999999 99
Q ss_pred CEEEEeccCCCHH-HHHHHHHH
Q 015424 263 DAVLLIAAVLPDL-DIRYMTKI 283 (407)
Q Consensus 263 DaVLLiaaiL~~~-~L~~Li~~ 283 (407)
|+|+++.+++... .+.++.++
T Consensus 217 dgv~vG~al~~~~~~~~~~~~~ 238 (244)
T 1vzw_A 217 EGAIVGKALYAKAFTLEEALEA 238 (244)
T ss_dssp EEEEECHHHHTTSSCHHHHHHH
T ss_pred ceeeeeHHHHcCCCCHHHHHHH
Confidence 9999998887543 45555544
No 174
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=96.92 E-value=0.0054 Score=62.23 Aligned_cols=89 Identities=15% Similarity=0.110 Sum_probs=72.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhccccccc
Q 015424 272 LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEII 351 (407)
Q Consensus 272 L~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i 351 (407)
|+.++++.|.++|+++||..+.|+.|.+.++...++ +++++=|-.||+ . |+...+++.+
T Consensus 98 l~~e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~-~vd~~KIgS~~~---------~----N~pLL~~va~------- 156 (385)
T 1vli_A 98 MPAEWILPLLDYCREKQVIFLSTVCDEGSADLLQST-SPSAFKIASYEI---------N----HLPLLKYVAR------- 156 (385)
T ss_dssp SCGGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTT-CCSCEEECGGGT---------T----CHHHHHHHHT-------
T ss_pred CCHHHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhc-CCCEEEECcccc---------c----CHHHHHHHHh-------
Confidence 677899999999999999999999999999999887 899999999998 4 4444444443
Q ss_pred ccCCceEEEeeCCCCHHHHHHH----HHcCCCEEEE
Q 015424 352 RQKNIIVVGESGLFTPDDIAYV----QEAGVKAVLV 383 (407)
Q Consensus 352 ~~~~v~vVAESGI~t~eD~~~l----~~~GadaVLV 383 (407)
.+.++|..-|..|.+++... .+.|..-|++
T Consensus 157 --~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiL 190 (385)
T 1vli_A 157 --LNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAI 190 (385)
T ss_dssp --TCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEE
T ss_pred --cCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEE
Confidence 35688899999999997654 4568755555
No 175
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=96.92 E-value=0.023 Score=53.86 Aligned_cols=156 Identities=14% Similarity=0.110 Sum_probs=94.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhc--CC-CCcEEec-ccc----CCH---HHHHHHHHcCCCE
Q 015424 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GV-KCPLLCK-EFI----VDA---WQIYYARTKGADA 264 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a--~v-~lPVL~K-DFI----id~---~QI~eAr~~GADa 264 (407)
..++.++++...++|+.++-| ++..+ .+++. +. ++.|-.- +|= ... .++.+|...|||.
T Consensus 35 ~~~i~~l~~~a~~~~~~aVcv---------~p~~v-~a~~~l~~~~~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdE 104 (234)
T 1n7k_A 35 EEDVRNLVREASDYGFRCAVL---------TPVYT-VKISGLAEKLGVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATE 104 (234)
T ss_dssp HHHHHHHHHHHHHHTCSEEEE---------CHHHH-HHHHHHHHHHTCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHhCCCEEEE---------chHHh-eeehHhCCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 346777788888889998887 35566 55431 11 3333211 331 111 4678889999999
Q ss_pred EEEecc--CC-C--HHHHHHHHHHHHHcCCcE--EEEeC--CHHHHHHH----hcccCCcEEEeeccccccccccccccc
Q 015424 265 VLLIAA--VL-P--DLDIRYMTKICKLLGLTA--LVEVH--DEREMDRV----LGIEGIELIGINNRNLAISIFSYRTET 331 (407)
Q Consensus 265 VLLiaa--iL-~--~~~L~~Li~~a~~LGL~a--LVEVh--t~eElerA----l~l~Ga~iIGINnRdL~~~~~~~t~~T 331 (407)
|-+..- .+ + -+++..+.+.|+..|+.. ++|.. +.+++.++ .++ |||+|=+. +||.+.
T Consensus 105 ID~vinig~~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i~~a~ria~ea-GADfVKTs--------TG~~~~- 174 (234)
T 1n7k_A 105 LDVVPHLSLGPEAVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTLSLLVDSSRRA-GADIVKTS--------TGVYTK- 174 (234)
T ss_dssp EEECCCGGGCHHHHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHHHHHHHHHHHT-TCSEEESC--------CSSSCC-
T ss_pred EEEeccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHHHHHHHHHHHh-CCCEEEeC--------CCCCCC-
Confidence 976432 22 2 235666677777767643 77764 55666554 444 89887763 222110
Q ss_pred cccCchhHHH--HhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCC
Q 015424 332 FEVDNSNTKK--LLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVK 379 (407)
Q Consensus 332 f~vDl~~t~~--L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gad 379 (407)
-..+++...- +.+. + . +.+.+.|||+|.+|+..+.++|++
T Consensus 175 ~gAt~~dv~l~~m~~~-----v--~-v~VKaaGGirt~~~al~~i~aGa~ 216 (234)
T 1n7k_A 175 GGDPVTVFRLASLAKP-----L--G-MGVKASGGIRSGIDAVLAVGAGAD 216 (234)
T ss_dssp CCSHHHHHHHHHHHGG-----G--T-CEEEEESSCCSHHHHHHHHHTTCS
T ss_pred CCCCHHHHHHHHHHHH-----H--C-CCEEEecCCCCHHHHHHHHHcCcc
Confidence 0111122111 2222 2 2 789999999999999999999999
No 176
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=96.90 E-value=0.0021 Score=61.77 Aligned_cols=159 Identities=13% Similarity=0.126 Sum_probs=101.2
Q ss_pred CHHHHHHHHhc-----CCCCcEEeccc----------cCCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHH
Q 015424 226 SFENLEAVRSA-----GVKCPLLCKEF----------IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKIC 284 (407)
Q Consensus 226 s~edL~~Vr~a-----~v~lPVL~KDF----------Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a 284 (407)
.+-+|..+++. +.++.|=..|. =+.+.++ +.+||+.|+|+++ .+ +++.+..=++.|
T Consensus 43 p~~~L~~v~~~~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~V~~Kv~~A 119 (254)
T 3m9y_A 43 PAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVAL---ADLGVKYVVIGHSERRELFHETDEEINKKAHAI 119 (254)
T ss_dssp CHHHHHHHHHHHHTTSSTTCEEEESCCCSSSSBSCTTCCCHHHH---HHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCCcceEEecccccccCCCccCcCCHHHH---HHcCCCEEEECcccccCccCCCHHHHHHHHHHH
Confidence 47788888754 13466666551 1555555 5679999999998 23 455555556778
Q ss_pred HHcCCcEEEEeCCH-H-------------HHHHHhcccCCc-----EEEeeccccccccccccccccccCchhHHHHhhc
Q 015424 285 KLLGLTALVEVHDE-R-------------EMDRVLGIEGIE-----LIGINNRNLAISIFSYRTETFEVDNSNTKKLLEG 345 (407)
Q Consensus 285 ~~LGL~aLVEVht~-e-------------ElerAl~l~Ga~-----iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~ 345 (407)
.+.||.++++|-.. + ++..++..-+++ +|....-=.||||..-|+ +...+....
T Consensus 120 l~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~vvIAYEPvWAIGTG~~At~-------e~aqevh~~ 192 (254)
T 3m9y_A 120 FKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTS-------EDANEMCAF 192 (254)
T ss_dssp HHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHCEEEECCGGGCC--CCCCH-------HHHHHHHHH
T ss_pred HHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHHhcCCHHHhCCEEEEECChhhhcCCCCCCH-------HHHHHHHHH
Confidence 89999999999854 3 345555421223 788877766665543332 222222111
Q ss_pred ccc---ccc---ccCCceEEEeeCCCCHHHHHHHH-HcCCCEEEEcccccCCCChHH
Q 015424 346 ERG---EII---RQKNIIVVGESGLFTPDDIAYVQ-EAGVKAVLVGESIVKQDDPGK 395 (407)
Q Consensus 346 ~~~---~~i---~~~~v~vVAESGI~t~eD~~~l~-~~GadaVLVGeaLmk~~dp~~ 395 (407)
+|. ..+ ...++.++-.|++ +++++..++ ..++||+|||.+-+++++-.+
T Consensus 193 IR~~l~~~~~~~~a~~~rIlYGGSV-~~~N~~~l~~~~diDG~LVGgASL~~~~F~~ 248 (254)
T 3m9y_A 193 VRQTIADLSSKEVSEATRIQYGGSV-KPNNIKEYMAQTDIDGALVGGASLKVEDFVQ 248 (254)
T ss_dssp HHHHHHHHSCHHHHTTSEEEECSCC-CTTTHHHHHTSTTCCEEEESGGGSSHHHHHH
T ss_pred HHHHHHHhcChhhcCCccEEEcCCc-CHHHHHHHHcCCCCCeEEeeHHhhCHHHHHH
Confidence 111 000 0235788888889 999999988 779999999999988655433
No 177
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=96.90 E-value=0.0026 Score=63.06 Aligned_cols=92 Identities=21% Similarity=0.234 Sum_probs=73.7
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEe---cCC---cCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEE
Q 015424 196 DFDPVEIARSYEKGGAACLSILT---DEK---YFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL 267 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLT---d~~---~F~G-s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLL 267 (407)
..+..++|+.+++.|++.|+|.. .+. ...| ..+.+..+|+. +++||+.-..|.++.++.++...| ||.|.+
T Consensus 228 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~-~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 228 AKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRRE-ADIPTGAVGLITSGWQAEEILQNGRADLVFL 306 (340)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-TTCCEEEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHH-cCCcEEeeCCCCCHHHHHHHHHCCCeeEEEe
Confidence 34789999999999999999963 111 1223 46778889987 899999999999999999999999 999999
Q ss_pred eccCCCHHHHHHHHHHHHHcCCc
Q 015424 268 IAAVLPDLDIRYMTKICKLLGLT 290 (407)
Q Consensus 268 iaaiL~~~~L~~Li~~a~~LGL~ 290 (407)
.-.++.+.+| ..+..+.+|.+
T Consensus 307 GR~~lanPdl--~~ki~~~l~~~ 327 (340)
T 3gr7_A 307 GRELLRNPYW--PYAAARELGAK 327 (340)
T ss_dssp CHHHHHCTTH--HHHHHHHTTCC
T ss_pred cHHHHhCchH--HHHHHHHCCCC
Confidence 9888866666 55666677764
No 178
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=96.89 E-value=0.0041 Score=63.65 Aligned_cols=132 Identities=17% Similarity=0.120 Sum_probs=80.1
Q ss_pred CCCEEEEeccC--------C-CHHHHHHHHHHHHHc---------------------CCc-EEEEeC---CH---HH-HH
Q 015424 261 GADAVLLIAAV--------L-PDLDIRYMTKICKLL---------------------GLT-ALVEVH---DE---RE-MD 302 (407)
Q Consensus 261 GADaVLLiaai--------L-~~~~L~~Li~~a~~L---------------------GL~-aLVEVh---t~---eE-le 302 (407)
-||++-|..+. | +.+.+.++++..++. ... ++|-+. +. .+ ++
T Consensus 211 ~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~ 290 (415)
T 3i65_A 211 YADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIAD 290 (415)
T ss_dssp GCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHH
T ss_pred hCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHHHHH
Confidence 38999998763 2 445677777766542 355 577666 32 22 34
Q ss_pred HHhcccCCcEEEeeccccccc--------cccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHH
Q 015424 303 RVLGIEGIELIGINNRNLAIS--------IFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQ 374 (407)
Q Consensus 303 rAl~l~Ga~iIGINnRdL~~~--------~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~ 374 (407)
.+.+. |++-|-+.|+-.-.. -.+++. ..+...+.+++..+... + +.++++|+.|||.|.+|+.++.
T Consensus 291 ~a~~a-GaDgIiv~Ntt~~r~dl~~~~~~~GGlSG---~a~~p~al~~I~~v~~~-v-~~~iPIIg~GGI~s~eDa~e~l 364 (415)
T 3i65_A 291 VLLET-NIDGMIISNTTTQINDIKSFENKKGGVSG---AKLKDISTKFICEMYNY-T-NKQIPIIASGGIFSGLDALEKI 364 (415)
T ss_dssp HHHHH-TCSEEEECCCBSCCCCCGGGTTCCSEEEE---GGGHHHHHHHHHHHHHH-T-TTCSCEEECSSCCSHHHHHHHH
T ss_pred HHHHc-CCcEEEEeCCCcccccccccccccCCcCC---ccchHHHHHHHHHHHHH-h-CCCCCEEEECCCCCHHHHHHHH
Confidence 45554 999888877643000 001110 11222223333322211 1 2368999999999999999999
Q ss_pred HcCCCEEEEcccccCC-CChHHHHH
Q 015424 375 EAGVKAVLVGESIVKQ-DDPGKGIT 398 (407)
Q Consensus 375 ~~GadaVLVGeaLmk~-~dp~~~i~ 398 (407)
.+||++|.||++++.. +.....+.
T Consensus 365 ~aGAd~VqIgra~l~~GP~~~~~i~ 389 (415)
T 3i65_A 365 EAGASVCQLYSCLVFNGMKSAVQIK 389 (415)
T ss_dssp HHTEEEEEESHHHHHHGGGHHHHHH
T ss_pred HcCCCEEEEcHHHHhcCHHHHHHHH
Confidence 9999999999999754 55544443
No 179
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=96.89 E-value=0.01 Score=59.47 Aligned_cols=93 Identities=20% Similarity=0.235 Sum_probs=74.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhccccccc
Q 015424 272 LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEII 351 (407)
Q Consensus 272 L~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i 351 (407)
|+.++++.|.++|++.||..+.|+-|.+.++...++ |++++=|-.||+ . |+...+++.+
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD~~svd~l~~~-~v~~~KI~S~~~---------~----N~pLL~~va~------- 133 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFDEESVDLIEAH-GIEIIKIASCSF---------T----DWPLLERIAR------- 133 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHT-TCCEEEECSSST---------T----CHHHHHHHHT-------
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCCHHHHHHHHHc-CCCEEEECcccc---------c----CHHHHHHHHh-------
Confidence 778889999999999999999999999999999997 999999999988 4 4444444443
Q ss_pred ccCCceEEEeeCCCCHHHHHHHH----HcCCCEEEE--ccccc
Q 015424 352 RQKNIIVVGESGLFTPDDIAYVQ----EAGVKAVLV--GESIV 388 (407)
Q Consensus 352 ~~~~v~vVAESGI~t~eD~~~l~----~~GadaVLV--GeaLm 388 (407)
.+.++|..-|..|.+++.... +.|.+ |++ .++-+
T Consensus 134 --~gKPviLstGmstl~Ei~~Ave~i~~~g~~-viLlhC~s~Y 173 (350)
T 3g8r_A 134 --SDKPVVASTAGARREDIDKVVSFMLHRGKD-LTIMHCVAEY 173 (350)
T ss_dssp --SCSCEEEECTTCCHHHHHHHHHHHHTTTCC-EEEEECCCCS
T ss_pred --hCCcEEEECCCCCHHHHHHHHHHHHHcCCC-EEEEecCCCC
Confidence 356888999999999987654 45766 555 55544
No 180
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=96.87 E-value=0.0061 Score=61.07 Aligned_cols=188 Identities=14% Similarity=0.055 Sum_probs=118.9
Q ss_pred CCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEe-----cCCcCCC-CHHHHHH---HHhcCCCCcEEec
Q 015424 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT-----DEKYFKG-SFENLEA---VRSAGVKCPLLCK 245 (407)
Q Consensus 175 ~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLT-----d~~~F~G-s~edL~~---Vr~a~v~lPVL~K 245 (407)
+++.||||. +.+....-..++|+...+.||.++..-+ -+..|+| +.+.|.. +++. ..+|+++
T Consensus 105 ~~~~vIAgp-------cs~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e-~Gl~~~t- 175 (350)
T 1vr6_A 105 GYFTIIAGP-------CSVEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADK-YGMYVVT- 175 (350)
T ss_dssp TEEEEEEEC-------SBCCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHH-HTCEEEE-
T ss_pred CCeEEEEeC-------CCcCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHH-cCCcEEE-
Confidence 357899997 3333344566788999999999987653 3335777 3444444 4444 6899998
Q ss_pred cccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHhcc---cCCcEEEeeccc
Q 015424 246 EFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLGI---EGIELIGINNRN 319 (407)
Q Consensus 246 DFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~eElerAl~l---~Ga~iIGINnRd 319 (407)
+ +.|+.++..+..+ +|.+-+.+.-+.+.+| | +.+-.+|+.+++... |.+|+..|++. .|..-+-+-.|.
T Consensus 176 e-~~d~~~~~~l~~~-vd~lkIgAr~~~n~~L--L-~~va~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG 250 (350)
T 1vr6_A 176 E-ALGEDDLPKVAEY-ADIIQIGARNAQNFRL--L-SKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERG 250 (350)
T ss_dssp E-CSSGGGHHHHHHH-CSEEEECGGGTTCHHH--H-HHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred E-eCCHHHHHHHHHh-CCEEEECcccccCHHH--H-HHHHccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 3 3788888888788 9999999988877554 3 334478999998875 56888877663 244222222221
Q ss_pred ccccccccccc-ccccCchhHHHHhhcccccccccCCceEEE-ee---CCCC--HHHHHHHHHcCCCEEEEccccc
Q 015424 320 LAISIFSYRTE-TFEVDNSNTKKLLEGERGEIIRQKNIIVVG-ES---GLFT--PDDIAYVQEAGVKAVLVGESIV 388 (407)
Q Consensus 320 L~~~~~~~t~~-Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVA-ES---GI~t--~eD~~~l~~~GadaVLVGeaLm 388 (407)
- ..|++. ...+|+.....|.+. .+++|+. .| |-+. +.-......+||+|++|-+-+.
T Consensus 251 ~----~typ~~~~~~vdl~ai~~lk~~--------~~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~ 314 (350)
T 1vr6_A 251 I----RTFEKATRNTLDISAVPIIRKE--------SHLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPE 314 (350)
T ss_dssp B----CCSCCSSSSBCCTTHHHHHHHH--------BSSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSC
T ss_pred C----CCCCCcChhhhhHHHHHHHHHh--------hCCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCC
Confidence 1 123323 455788776666543 1344533 33 4322 3333444568999999987654
No 181
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=96.85 E-value=0.0027 Score=60.99 Aligned_cols=161 Identities=14% Similarity=0.111 Sum_probs=100.6
Q ss_pred HHHHHHHHhc--CCCCcEEeccc----------cCCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcC
Q 015424 227 FENLEAVRSA--GVKCPLLCKEF----------IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLG 288 (407)
Q Consensus 227 ~edL~~Vr~a--~v~lPVL~KDF----------Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LG 288 (407)
+-+|..+++. +.++.|=..|. =+.+.++ +.+||+.|+|+++ .+ +++.+..=++.|.+.|
T Consensus 43 ~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~G 119 (252)
T 2btm_A 43 FLFLDRLVQAADGTDLKIGAQTMHFADQGAYTGEVSPVML---KDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRG 119 (252)
T ss_dssp GGGHHHHHHHHTTSSEEEEESCCCSSSSBSCTTCCCHHHH---HHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCceEEeccCCCCCCCCcCCcCCHHHH---HHcCCCEEEeCchhcccccCCCHHHHHHHHHHHHHCC
Confidence 5577766643 12455555541 1556565 4559999999998 22 4444555477788899
Q ss_pred CcEEEEeCCHHH--------------HHHHhcccCCc-----EEEeeccccccccccccccccccCchhHHHHhhccccc
Q 015424 289 LTALVEVHDERE--------------MDRVLGIEGIE-----LIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGE 349 (407)
Q Consensus 289 L~aLVEVht~eE--------------lerAl~l~Ga~-----iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~ 349 (407)
|.++++|-...| +..++..-+++ +|....-=.||||..-+ .+...+....+|.-
T Consensus 120 L~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPvWAIGTG~~At-------pe~a~evh~~IR~~ 192 (252)
T 2btm_A 120 LIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSST-------PEDANSVCGHIRSV 192 (252)
T ss_dssp CEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCHHHHTTCEEEECCGGGTTTSCCCC-------HHHHHHHHHHHHHH
T ss_pred CEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHHcCCEEEEECCHHHhCCCCCCC-------HHHHHHHHHHHHHH
Confidence 999999985433 33444311223 78887776766653222 22222222222110
Q ss_pred ---ccc---cCCceEEEeeCCCCHHHHHHHH-HcCCCEEEEcccccCCCChHHHHH
Q 015424 350 ---IIR---QKNIIVVGESGLFTPDDIAYVQ-EAGVKAVLVGESIVKQDDPGKGIT 398 (407)
Q Consensus 350 ---~i~---~~~v~vVAESGI~t~eD~~~l~-~~GadaVLVGeaLmk~~dp~~~i~ 398 (407)
.+- ...+.++..|+++. +++..++ ..++||+|||.+-+++++..+.++
T Consensus 193 l~~~~~~~~a~~vrIlYGGSV~~-~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii~ 247 (252)
T 2btm_A 193 VSRLFGPEAAEAIRIQYGGSVKP-DNIRDFLAQQQIDGALVGGASLEPASFLQLVE 247 (252)
T ss_dssp HHHHHCHHHHTTSEEEEESSCCT-TTHHHHHTSTTCCEEEESGGGSSHHHHHHHHH
T ss_pred HHHhcCccccCceeEEEcCCCCH-HHHHHHHcCCCCCeeEecHHHhChHHHHHHHH
Confidence 000 13578888899955 8898888 779999999999999888776664
No 182
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=96.84 E-value=0.0058 Score=60.92 Aligned_cols=137 Identities=15% Similarity=0.054 Sum_probs=86.4
Q ss_pred HHHHHcCCCEEEEeccC-------C-------CH-------HH---HHHHHHHHHH-cC--CcEEEEeC----------C
Q 015424 255 YYARTKGADAVLLIAAV-------L-------PD-------LD---IRYMTKICKL-LG--LTALVEVH----------D 297 (407)
Q Consensus 255 ~eAr~~GADaVLLiaai-------L-------~~-------~~---L~~Li~~a~~-LG--L~aLVEVh----------t 297 (407)
..|.++|.|+|=|.++- | +| .. +.++++.+++ .| ..+.|-++ +
T Consensus 165 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~ 244 (363)
T 3l5l_A 165 RRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQT 244 (363)
T ss_dssp HHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHH
T ss_pred HHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCC
Confidence 34678899999998751 1 11 11 3344554443 34 33555432 2
Q ss_pred HHH----HHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHH
Q 015424 298 ERE----MDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYV 373 (407)
Q Consensus 298 ~eE----lerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l 373 (407)
.+| ++...++ |+++|-+.++...... ..+ .....+++....+.+. -++++|+-|||+|++++.++
T Consensus 245 ~~~~~~la~~L~~~-Gvd~i~vs~g~~~~~~-~~~-~~~~~~~~~~~~ir~~--------~~iPVi~~GgI~s~e~a~~~ 313 (363)
T 3l5l_A 245 LEESIELARRFKAG-GLDLLSVSVGFTIPDT-NIP-WGPAFMGPIAERVRRE--------AKLPVTSAWGFGTPQLAEAA 313 (363)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEEEECCCSSCC-CCC-CCTTTTHHHHHHHHHH--------HTCCEEECSSTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCCEEEEecCcccccc-ccC-CCcchhHHHHHHHHHH--------cCCcEEEeCCCCCHHHHHHH
Confidence 333 2233343 8999998775441000 000 0011234444455443 25789999999999999999
Q ss_pred HHcC-CCEEEEcccccCCCChHHHHHhhhc
Q 015424 374 QEAG-VKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 374 ~~~G-adaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
.+.| ||.|.+|.+++..+|....+++-++
T Consensus 314 l~~G~aD~V~iGR~~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 314 LQANQLDLVSVGRAHLADPHWAYFAAKELG 343 (363)
T ss_dssp HHTTSCSEEECCHHHHHCTTHHHHHHHHTT
T ss_pred HHCCCccEEEecHHHHhCchHHHHHHHHcC
Confidence 9999 9999999999999999888887776
No 183
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=96.84 E-value=0.0059 Score=61.36 Aligned_cols=119 Identities=15% Similarity=0.134 Sum_probs=81.7
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCCCEEEEec-------
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIA------- 269 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLia------- 269 (407)
+-.+.++.+.+.|+++|.+.+-..+-....+.++.+|+. + ++||+.++ +.+..++..+..+|||+|.+..
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~-~~~~pviv~~-v~~~~~a~~a~~~Gad~I~vg~~~G~~~~ 230 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK-YPNLDLIAGN-IVTKEAALDLISVGADCLKVGIGPGSICT 230 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH-CTTCEEEEEE-ECSHHHHHHHHTTTCSEEEECSSCSTTSH
T ss_pred hHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH-CCCCeEEEcC-CCcHHHHHHHHhcCCCEEEECCCCCcCcC
Confidence 456678888899999999843211111125677778876 6 89999854 5677788888999999999821
Q ss_pred ----cCCCHHH---HHHHHHHHHHcCCcEEE--EeCCHHHHHHHhcccCCcEEEeeccc
Q 015424 270 ----AVLPDLD---IRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRN 319 (407)
Q Consensus 270 ----aiL~~~~---L~~Li~~a~~LGL~aLV--EVht~eElerAl~l~Ga~iIGINnRd 319 (407)
.-....+ +.++.+.+...++.++. -+++.+++.+++.+ ||+.+++-..-
T Consensus 231 ~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~-GAd~V~iG~~~ 288 (404)
T 1eep_A 231 TRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAA-GADSVMIGNLF 288 (404)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHH-TCSEEEECHHH
T ss_pred ccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHc-CCCHHhhCHHH
Confidence 1111112 33333333346888888 68999999999998 99999995443
No 184
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=96.84 E-value=0.003 Score=60.56 Aligned_cols=197 Identities=12% Similarity=0.042 Sum_probs=119.0
Q ss_pred ceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCC--cEEEEEecCCcCCCCHHHHHHHHhcCC--CCcEEeccc-----
Q 015424 177 PALIAEVKKASPSRGILREDFDPVEIARSYEKGGA--ACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEF----- 247 (407)
Q Consensus 177 ~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA--~aISVLTd~~~F~Gs~edL~~Vr~a~v--~lPVL~KDF----- 247 (407)
+-|+...|=. .+ .....++++.....-. ..+-|+.-|. +-+|..+++. + ++.|=..|.
T Consensus 5 ~~i~gNwKmn-~~------~~~~~~l~~~l~~~~~~~~~vev~v~Pp-----~~~L~~v~~~-~~~~i~vgAQn~~~~~~ 71 (248)
T 1o5x_A 5 YFVAANWKCN-GT------LESIKSLTNSFNNLDFDPSKLDVVVFPV-----SVHYDHTRKL-LQSKFSTGIQNVSKFGN 71 (248)
T ss_dssp EEEEEECCBC-CC------HHHHHHHHHHHHTSCCCTTTEEEEEECC-----GGGHHHHHHH-SCTTSEEEESCCCSSCS
T ss_pred CEEEEecCcc-cC------HHHHHHHHHHHHhhcccccCceEEEeCc-----HHHHHHHHHH-hccCCeEEeccCCCCCC
Confidence 4556666543 11 1134556666644111 1345554454 6688888764 3 455655552
Q ss_pred -----cCCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCCHHHHH--------------
Q 015424 248 -----IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHDEREMD-------------- 302 (407)
Q Consensus 248 -----Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht~eEle-------------- 302 (407)
=+.+.++ +++||+.|+|+++ .+ +++.+..=++.|.+.||.++++|-...|-.
T Consensus 72 GA~TGEiS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~ 148 (248)
T 1o5x_A 72 GSYTGEVSAEIA---KDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVK 148 (248)
T ss_dssp BSCTTCCCHHHH---HHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHH
T ss_pred CCcCCcCCHHHH---HHcCCCEEEeCChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCChHHHHHHHHH
Confidence 1555554 5679999999998 22 556676777788899999999998543322
Q ss_pred HHhcc-c--CCcEEEeeccccccccccccccccccCchhHHHHhhcccc---cccc---cCCceEEEeeCCCCHHHHHHH
Q 015424 303 RVLGI-E--GIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERG---EIIR---QKNIIVVGESGLFTPDDIAYV 373 (407)
Q Consensus 303 rAl~l-~--Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~---~~i~---~~~v~vVAESGI~t~eD~~~l 373 (407)
.+++. + ...+|....--.||||..- +++...+....+|. ..+- ..++.++..|++ +++++..+
T Consensus 149 ~~l~~~~~~~~~vIAYEPvWAIGTG~~A-------tpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l 220 (248)
T 1o5x_A 149 AFVDLIDNFDNVILVYEPLWAIGTGKTA-------TPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSV-NTENCSSL 220 (248)
T ss_dssp TTGGGCCCTTSEEEEECCGGGSSSSCCC-------CHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEECSCC-CTTTHHHH
T ss_pred HHHhhhhhhcCEEEEECCHHHhCCCCCC-------CHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCCC-CHHHHHHH
Confidence 13321 0 2347777777676655321 22222222222111 0000 124678888888 66689888
Q ss_pred HH-cCCCEEEEcccccCCCChHHHHH
Q 015424 374 QE-AGVKAVLVGESIVKQDDPGKGIT 398 (407)
Q Consensus 374 ~~-~GadaVLVGeaLmk~~dp~~~i~ 398 (407)
.. .++||+|||.+-++ ++..+.++
T Consensus 221 ~~~~diDG~LVGgAsL~-~~F~~ii~ 245 (248)
T 1o5x_A 221 IQQEDIDGFLVGNASLK-ESFVDIIK 245 (248)
T ss_dssp HTSTTCCEEEECGGGGS-TTHHHHHH
T ss_pred HcCCCCCeeEeeHHHHH-HHHHHHHH
Confidence 87 89999999999999 88877664
No 185
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=96.84 E-value=0.012 Score=55.01 Aligned_cols=177 Identities=15% Similarity=0.151 Sum_probs=100.8
Q ss_pred CHHHHHHHHHHcC--CcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE--eccccCCHH---HHHHHHHcCCCEEEEecc
Q 015424 198 DPVEIARSYEKGG--AACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--CKEFIVDAW---QIYYARTKGADAVLLIAA 270 (407)
Q Consensus 198 dp~~iA~ay~~~G--A~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL--~KDFIid~~---QI~eAr~~GADaVLLiaa 270 (407)
+..+.-+..++.| +.++.|-+ +.|...+++-++.+|+. .+.+|+ .|=.-++.. .+..+..+|||.|.+-+
T Consensus 23 ~~~~a~~~v~~~~~~v~~~Kvg~-~lf~~~G~~~v~~l~~~-~g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~- 99 (228)
T 3m47_A 23 NRDDALRVTGEVREYIDTVKIGY-PLVLSEGMDIIAEFRKR-FGCRIIADFKVADIPETNEKICRATFKAGADAIIVHG- 99 (228)
T ss_dssp SHHHHHHHHHTTTTTCSEEEEEH-HHHHHHCTHHHHHHHHH-HCCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEES-
T ss_pred CHHHHHHHHHHcCCcccEEEEcH-HHHHhcCHHHHHHHHhc-CCCeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEec-
Confidence 3434444444455 78899954 55555667788888872 134554 332213322 55667789999988844
Q ss_pred CCCHHHHHHHHHHHHHcCCcE--EEEeCCHHH-----------HHHHhcccCCcEEEeeccccccccccccccccccCch
Q 015424 271 VLPDLDIRYMTKICKLLGLTA--LVEVHDERE-----------MDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 271 iL~~~~L~~Li~~a~~LGL~a--LVEVht~eE-----------lerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
....+.++.+++.+++.|..+ |.+.++... +..+.+. |.+ |+-- +.| ..+
T Consensus 100 ~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~-G~~--GvV~-----------~at---~~~ 162 (228)
T 3m47_A 100 FPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDL-GVK--NYVG-----------PST---RPE 162 (228)
T ss_dssp TTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHT-TCC--EEEC-----------CSS---CHH
T ss_pred cCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHh-CCc--EEEE-----------CCC---ChH
Confidence 445667888999888776544 445555421 1222232 432 3210 011 122
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCH-HHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTP-DDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~-eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
....+.+.. +.+..+ .-.||.-. .+. .+.++|+|.++||.+|++++||.++++++..
T Consensus 163 e~~~ir~~~------~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~~~ 220 (228)
T 3m47_A 163 RLSRLREII------GQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAGAIE 220 (228)
T ss_dssp HHHHHHHHH------CSSSEE-EECC----------CGGGTCSEEEECHHHHTSSCHHHHHHHHHH
T ss_pred HHHHHHHhc------CCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHHHHH
Confidence 334444331 233333 45676422 156 7778999999999999999999999888754
No 186
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=96.83 E-value=0.0081 Score=61.14 Aligned_cols=118 Identities=13% Similarity=0.222 Sum_probs=83.6
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEec--------cC
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIA--------AV 271 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLia--------ai 271 (407)
.+.++.+.+.|++.|.+-|-...-.+-.+.++.+|+. .++||+.+. +.+..+...+..+|||+|.+.. ..
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~-~~i~Vi~g~-V~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~ 223 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK-MNIDVIVGN-VVTEEATKELIENGADGIKVGIGPGSICTTRI 223 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTT-CCCEEEEEE-ECSHHHHHHHHHTTCSEEEECC---------C
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhc-CCCeEEEee-cCCHHHHHHHHHcCCCEEEEeCCCCcCccccc
Confidence 6889999999999997744321111114677788875 589999875 4778888889999999999831 11
Q ss_pred -----CCH-HHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhcccCCcEEEeecccc
Q 015424 272 -----LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNL 320 (407)
Q Consensus 272 -----L~~-~~L~~Li~~a~~LGL~aLV--EVht~eElerAl~l~Ga~iIGINnRdL 320 (407)
.+. ..+.++.+.++..++.++. -++|.+++.+++.+ ||+.|.+-.+=+
T Consensus 224 ~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalal-GAd~V~vGt~f~ 279 (400)
T 3ffs_A 224 VAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAV-GASSVMIGSILA 279 (400)
T ss_dssp CSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTT-TCSEEEECGGGT
T ss_pred ccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHc-CCCEEEEChHHh
Confidence 122 1233344444456899998 48999999999998 999999865544
No 187
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=96.79 E-value=0.034 Score=53.83 Aligned_cols=187 Identities=20% Similarity=0.195 Sum_probs=119.8
Q ss_pred CCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEec-----CCcCCC-CHHHHHHHH---hcCCCCcEEec
Q 015424 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTD-----EKYFKG-SFENLEAVR---SAGVKCPLLCK 245 (407)
Q Consensus 175 ~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd-----~~~F~G-s~edL~~Vr---~a~v~lPVL~K 245 (407)
+++.||||.= + +....-..++|+.+.+.||.++..-+. +..|+| +.+.++.++ +. ..+|+++-
T Consensus 37 ~~~~vIAgpc----~---~~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~-~Gl~~~te 108 (276)
T 1vs1_A 37 GSKAVIAGPC----S---VESWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDE-AGLPVVTE 108 (276)
T ss_dssp TBCEEEEECS----B---CCCHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH-HTCCEEEE
T ss_pred CCeEEEEecC----C---CCCHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHH-cCCcEEEe
Confidence 3588999982 3 333335677888899999999876533 234777 345555444 43 58999873
Q ss_pred cccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHhcc---cCCcEEEeeccc
Q 015424 246 EFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLGI---EGIELIGINNRN 319 (407)
Q Consensus 246 DFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~eElerAl~l---~Ga~iIGINnRd 319 (407)
+.|+.++.....+ +|.+-+.+.-+.+.+| ++.+-.+|+.+++... |.+|++.|++. .|..-|-+-.|.
T Consensus 109 --~~d~~~~~~l~~~-vd~~kIgs~~~~n~~l---l~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg 182 (276)
T 1vs1_A 109 --VLDPRHVETVSRY-ADMLQIGARNMQNFPL---LREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERG 182 (276)
T ss_dssp --CCCGGGHHHHHHH-CSEEEECGGGTTCHHH---HHHHHHHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred --cCCHHHHHHHHHh-CCeEEECcccccCHHH---HHHHHccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3688888888788 9999999988877554 4444577999998875 55898887763 254333343332
Q ss_pred cccccccccc-cccccCchhHHHHhhcccccccccCCceEEE-ee---CCCC--HHHHHHHHHcCCCEEEEcccc
Q 015424 320 LAISIFSYRT-ETFEVDNSNTKKLLEGERGEIIRQKNIIVVG-ES---GLFT--PDDIAYVQEAGVKAVLVGESI 387 (407)
Q Consensus 320 L~~~~~~~t~-~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVA-ES---GI~t--~eD~~~l~~~GadaVLVGeaL 387 (407)
- ..|++ ....+|+.....|.+. .+++|+. .+ |.+. +.-......+|++|++|-+-+
T Consensus 183 ~----~~yp~y~~~~vdl~~i~~lk~~--------~~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 183 I----RTFEPSTRFTLDVAAVAVLKEA--------THLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp B----CCSCCSSSSBCBHHHHHHHHHH--------BSSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred c----CCCCCcCcchhCHHHHHHHHHH--------hCCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 2 12322 3455787766666542 1344533 33 4432 333344466899999998876
No 188
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=96.77 E-value=0.0021 Score=61.42 Aligned_cols=75 Identities=25% Similarity=0.320 Sum_probs=60.9
Q ss_pred CHHHHHHHHHHcCCcEEEEEe-------cC-----------CcCCCC------HHHHHHHHhcCCCCcEEeccccCCHHH
Q 015424 198 DPVEIARSYEKGGAACLSILT-------DE-----------KYFKGS------FENLEAVRSAGVKCPLLCKEFIVDAWQ 253 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLT-------d~-----------~~F~Gs------~edL~~Vr~a~v~lPVL~KDFIid~~Q 253 (407)
++.++|+.+++.|+++|.|-. +. ..+.|. ++.+..+++. +++||+.-..|.++.+
T Consensus 177 ~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~-~~ipvia~GGI~~~~d 255 (311)
T 1ep3_A 177 DIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQD-VDIPIIGMGGVANAQD 255 (311)
T ss_dssp CSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTT-CSSCEEECSSCCSHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHh-cCCCEEEECCcCCHHH
Confidence 678899999999999999932 11 012332 4778888886 8999999999999999
Q ss_pred HHHHHHcCCCEEEEeccCCC
Q 015424 254 IYYARTKGADAVLLIAAVLP 273 (407)
Q Consensus 254 I~eAr~~GADaVLLiaaiL~ 273 (407)
+.++..+|||+|.+..+++.
T Consensus 256 ~~~~l~~GAd~V~vg~~~l~ 275 (311)
T 1ep3_A 256 VLEMYMAGASAVAVGTANFA 275 (311)
T ss_dssp HHHHHHHTCSEEEECTHHHH
T ss_pred HHHHHHcCCCEEEECHHHHc
Confidence 99999999999999988773
No 189
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.77 E-value=0.016 Score=59.96 Aligned_cols=174 Identities=15% Similarity=0.123 Sum_probs=118.9
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEe-cCCcCCCCHHHHHHHHhc-CCCCcEEeccccCCHHH
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT-DEKYFKGSFENLEAVRSA-GVKCPLLCKEFIVDAWQ 253 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLT-d~~~F~Gs~edL~~Vr~a-~v~lPVL~KDFIid~~Q 253 (407)
+.-+++|+ .+..++.++. +.||..|.|+- +-.-|.=+++....+.+. ..++++++--.|-++.+
T Consensus 157 gm~~LvEv-------------h~~eE~~~A~-~lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~ed 222 (452)
T 1pii_A 157 EMGVLTEV-------------SNEEEQERAI-ALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQ 222 (452)
T ss_dssp TCEEEEEE-------------CSHHHHHHHH-HTTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCCCHHH
T ss_pred CCeEEEEe-------------CCHHHHHHHH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHH
Confidence 46788888 3666765554 56899999972 222344456666666543 12678999999999999
Q ss_pred HHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccc
Q 015424 254 IYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFE 333 (407)
Q Consensus 254 I~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~ 333 (407)
+..++.+ ||+||++.++....+....++... .|.--++-+.+.+++..|.++ ||+++|..- |++..-.
T Consensus 223 v~~~~~~-a~avLVGealmr~~d~~~~~~~l~-~~~~KICGit~~eda~~a~~~-Gad~iGfIf---------~~~SpR~ 290 (452)
T 1pii_A 223 VRELSHF-ANGFLIGSALMAHDDLHAAVRRVL-LGENKVCGLTRGQDAKAAYDA-GAIYGGLIF---------VATSPRC 290 (452)
T ss_dssp HHHHTTT-CSEEEECHHHHTCSCHHHHHHHHH-HCSCEECCCCSHHHHHHHHHH-TCSEEEEEC---------CTTCTTB
T ss_pred HHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHH-HHhccccCCCcHHHHHHHHhc-CCCEEEeec---------CCCCCCC
Confidence 9999999 999999999886544444333322 255567788999999999998 999999952 2222234
Q ss_pred cCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHH-HcCCCEEEE
Q 015424 334 VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQ-EAGVKAVLV 383 (407)
Q Consensus 334 vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~-~~GadaVLV 383 (407)
++++++.+|... ..+..|..-==.+++.+..+. .+|.|.|=+
T Consensus 291 V~~~~a~~i~~~--------~~v~~VgVFvn~~~~~i~~~~~~~~ld~vQL 333 (452)
T 1pii_A 291 VNVEQAQEVMAA--------APLQYVGVFRNHDIADVVDKAKVLSLAAVQL 333 (452)
T ss_dssp CCHHHHHHHHHH--------CCCEEEEEESSCCHHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHhc--------CCCCEEEEEeCCCHHHHHHHHHhcCCCEEEE
Confidence 788888888664 123344333334666766654 467887744
No 190
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=96.74 E-value=0.017 Score=57.85 Aligned_cols=93 Identities=14% Similarity=0.220 Sum_probs=71.0
Q ss_pred CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEec---cCC--CHHHHHHHHHHHHHc--CCcEEEE--e
Q 015424 225 GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIA---AVL--PDLDIRYMTKICKLL--GLTALVE--V 295 (407)
Q Consensus 225 Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLia---aiL--~~~~L~~Li~~a~~L--GL~aLVE--V 295 (407)
-+.++++.+|+. +++||+.|+. .++.....+..+|||+|.+.- +-+ ....+..+.+..+.+ ++.++++ +
T Consensus 216 ~~~~~i~~lr~~-~~~PvivK~v-~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI 293 (368)
T 2nli_A 216 ISPRDIEEIAGH-SGLPVFVKGI-QHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGV 293 (368)
T ss_dssp CCHHHHHHHHHH-SSSCEEEEEE-CSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSC
T ss_pred hhHHHHHHHHHH-cCCCEEEEcC-CCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCC
Confidence 468999999997 8999999974 778888889999999999843 222 223455555555555 4777775 7
Q ss_pred CCHHHHHHHhcccCCcEEEeecccc
Q 015424 296 HDEREMDRVLGIEGIELIGINNRNL 320 (407)
Q Consensus 296 ht~eElerAl~l~Ga~iIGINnRdL 320 (407)
++.+++.+++.+ ||+.|+|-..-|
T Consensus 294 ~~g~D~~kalal-GAd~V~iGr~~l 317 (368)
T 2nli_A 294 RRGEHVAKALAS-GADVVALGRPVL 317 (368)
T ss_dssp CSHHHHHHHHHT-TCSEEEECHHHH
T ss_pred CCHHHHHHHHHc-CCCEEEECHHHH
Confidence 899999999998 999999965433
No 191
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=96.73 E-value=0.0063 Score=58.62 Aligned_cols=193 Identities=11% Similarity=0.046 Sum_probs=115.2
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCC-cEEEEEecCCcCCCCHHHHHHHHhcC--CCCcEEeccc-----
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAG--VKCPLLCKEF----- 247 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA-~aISVLTd~~~F~Gs~edL~~Vr~a~--v~lPVL~KDF----- 247 (407)
++-|+...|=. -+ .....++++.+..... ..+-|+.-| .+-+|..+++.. .++.|=..|.
T Consensus 5 ~~~i~gNwKmn-~~------~~~~~~l~~~l~~~~~~~~vev~v~P-----p~~~L~~v~~~~~~~~i~vgAQn~~~~~~ 72 (257)
T 2yc6_A 5 RPFIGGNFKCN-GS------LDFIKSHVAAIAAHKIPDSVDVVIAP-----SAVHLSTAIAANTSKQLRIAAQNVYLEGN 72 (257)
T ss_dssp CCEEEEECCSC-CC------HHHHHHHHHHHHTSCCCTTSEEEEEC-----CGGGHHHHHHHCCCSSCEEEESCCCSSCS
T ss_pred CeEEEEECccc-cC------HHHHHHHHHHHhhcccccCceEEEeC-----CHHHHHHHHHHhCCCCceEEeccCCCCCC
Confidence 34566666643 11 1244556666654111 223343334 366888887641 2466665552
Q ss_pred -----cCCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeC-CHHH-------------HH
Q 015424 248 -----IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVH-DERE-------------MD 302 (407)
Q Consensus 248 -----Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVh-t~eE-------------le 302 (407)
=+.+.++ +++||+.|+|+++ .+ +++.+..=++.|.+.||.++++|- +++| ++
T Consensus 73 GAfTGEiS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~ 149 (257)
T 2yc6_A 73 GAWTGETSVEML---QDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLE 149 (257)
T ss_dssp SSCTTCCCHHHH---HHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHH
T ss_pred cCccCccCHHHH---HHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHH
Confidence 1555554 5679999999998 33 566676777788899999999997 4444 22
Q ss_pred HHhccc-CCc------EEEeeccccccccccccccccccCchhHHHHhhccccc---ccc---cCCceEEEeeCCCCHHH
Q 015424 303 RVLGIE-GIE------LIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGE---IIR---QKNIIVVGESGLFTPDD 369 (407)
Q Consensus 303 rAl~l~-Ga~------iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~---~i~---~~~v~vVAESGI~t~eD 369 (407)
.+++.- +++ +|....-=.||||..- +.+...+....+|.- .+- ...+.++..|++ ++++
T Consensus 150 ~~l~~~~~~~~~~~~vvIAYEPvWAIGTG~~A-------tpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N 221 (257)
T 2yc6_A 150 ALGKELGESKMLWKEVVIAYEPVWSIGTGVVA-------TPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSA-NGSN 221 (257)
T ss_dssp HHHHHHTTCHHHHHTEEEEECCGGGTTTSCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESSC-CTTT
T ss_pred HHHhcCCChhhccCCEEEEECCHHHhCCCCCC-------CHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCcc-CHHH
Confidence 333211 112 7888777666655321 222222222222110 000 135788888888 6669
Q ss_pred HHHHHHc-CCCEEEEcccccCCC
Q 015424 370 IAYVQEA-GVKAVLVGESIVKQD 391 (407)
Q Consensus 370 ~~~l~~~-GadaVLVGeaLmk~~ 391 (407)
+..+... ++||+|||.+-++++
T Consensus 222 ~~~l~~~~diDG~LVGgAsL~a~ 244 (257)
T 2yc6_A 222 NEKLGQCPNIDGFLVGGASLKPE 244 (257)
T ss_dssp HHHHHTSTTCCEEEESGGGGSTH
T ss_pred HHHHHcCCCCCeeeecHHHHHHH
Confidence 9998887 999999999999986
No 192
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=96.73 E-value=0.0032 Score=60.65 Aligned_cols=185 Identities=14% Similarity=0.101 Sum_probs=110.8
Q ss_pred CHHHHHHHHHHc-CC-cEEEEEecCCcCCCCHHHHHHHHhc--CCCCcEEeccc----------cCCHHHHHHHHHcCCC
Q 015424 198 DPVEIARSYEKG-GA-ACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLCKEF----------IVDAWQIYYARTKGAD 263 (407)
Q Consensus 198 dp~~iA~ay~~~-GA-~aISVLTd~~~F~Gs~edL~~Vr~a--~v~lPVL~KDF----------Iid~~QI~eAr~~GAD 263 (407)
...++++.+... .. ..+-|+.-|. +-+|..+++. +.++.|=..|. =+.+.++ +.+||+
T Consensus 19 ~~~~l~~~l~~~~~~~~~vev~v~Pp-----~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~mL---~d~G~~ 90 (255)
T 1b9b_A 19 EAKKFVSLLVNELHDVKEFEIVVCPP-----FTALSEVGEILSGRNIKLGAQNVFYEDQGAFTGEISPLML---QEIGVE 90 (255)
T ss_dssp HHHHHHHHHHHHTSSCCSSEEEEECC-----GGGHHHHHHHHTTSSSEEEESCCCSSSSBSCTTCCCHHHH---HTTTCC
T ss_pred HHHHHHHHHHhhcccccCeeEEEeCc-----HHHHHHHHHHhcCCCceEeeccCCCCCCCCccCcCCHHHH---HHcCCC
Confidence 344566665431 11 1233443343 5677777653 13466665552 1455554 567999
Q ss_pred EEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeC-CHHH-------------HHHHhccc-----CCcEEEeecc
Q 015424 264 AVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVH-DERE-------------MDRVLGIE-----GIELIGINNR 318 (407)
Q Consensus 264 aVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVh-t~eE-------------lerAl~l~-----Ga~iIGINnR 318 (407)
.|+|+++ .+ +++.+..=++.|.+.||.++++|- +++| ++.++..- ...+|....-
T Consensus 91 ~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPv 170 (255)
T 1b9b_A 91 YVIVGHSERRRIFKEDDEFINRKVKAVLEKGMTPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEAKRVVIAYEPV 170 (255)
T ss_dssp EEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHTCHHHHHHHHHHHHHTTCCHHHHTTCEEEECCG
T ss_pred EEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHcCCEEEEECCH
Confidence 9999998 33 444455557788899999999997 4444 22334210 1347888777
Q ss_pred ccccccccccccccccCchhHHHHhhcccc---cccc---cCCceEEEeeCCCCHHHHHHHH-HcCCCEEEEcccccCCC
Q 015424 319 NLAISIFSYRTETFEVDNSNTKKLLEGERG---EIIR---QKNIIVVGESGLFTPDDIAYVQ-EAGVKAVLVGESIVKQD 391 (407)
Q Consensus 319 dL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~---~~i~---~~~v~vVAESGI~t~eD~~~l~-~~GadaVLVGeaLmk~~ 391 (407)
=.||||..-| .+...+....+|. ..+- ...+.++..|++ +++++..+. ..++||+|||.+-++++
T Consensus 171 WAIGTG~~At-------pe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~diDG~LVGgASLka~ 242 (255)
T 1b9b_A 171 WAIGTGRVAT-------PQQAQEVHAFIRKLLSEMYDEETAGSIRILYGGSI-KPDNFLGLIVQKDIDGGLVGGASLKES 242 (255)
T ss_dssp GGSSSSCCCC-------HHHHHHHHHHHHHHHHHHSCHHHHHHSEEEEESSC-CHHHHTTTSSSTTCCEEEESGGGTSTH
T ss_pred HHhCCCCCCC-------HHHHHHHHHHHHHHHHHhcCccccCcceEEEcCcC-CHHHHHHHHcCCCCCeeEeehHhhcCc
Confidence 6766653222 2222222222111 0000 124678888888 669999887 77999999999999998
Q ss_pred --ChHHHHH
Q 015424 392 --DPGKGIT 398 (407)
Q Consensus 392 --dp~~~i~ 398 (407)
+..+.++
T Consensus 243 ~~~F~~ii~ 251 (255)
T 1b9b_A 243 FIELARIMR 251 (255)
T ss_dssp HHHHHHHHT
T ss_pred cccHHHHHH
Confidence 7766554
No 193
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=96.72 E-value=0.0028 Score=61.62 Aligned_cols=200 Identities=12% Similarity=0.039 Sum_probs=125.2
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCC-cEEEEEecCCcCCCCHHHHHHHHhcCC--CCcEEeccc-----
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEF----- 247 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA-~aISVLTd~~~F~Gs~edL~~Vr~a~v--~lPVL~KDF----- 247 (407)
++-|++..|=. |. .....++++.....-. ..+-|+.-|. +-+|..+++. + ++.|=..|.
T Consensus 24 k~~i~gNWKmn----~t---~~~~~~l~~~l~~~~~~~~vevvv~Pp-----~~~L~~v~~~-~~~~i~vgAQn~~~~~~ 90 (275)
T 1mo0_A 24 KFFVGGNWKMN----GD---YASVDGIVTFLNASADNSSVDVVVAPP-----APYLAYAKSK-LKAGVLVAAQNCYKVPK 90 (275)
T ss_dssp CEEEEEECCBC----CC---HHHHHHHHHHHHHSCCCTTEEEEEECC-----GGGHHHHHHH-SCTTEEEEESCCCSSSS
T ss_pred CCEEEEecccc----cC---HHHHHHHHHHHhhhccccCceEEEeCc-----HHHHHHHHHH-hhCCCeEEeccCCCCCC
Confidence 45677777765 11 1245567777654211 2355554454 6688888764 3 355555551
Q ss_pred -----cCCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCC-HHHHH-------------
Q 015424 248 -----IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHD-EREMD------------- 302 (407)
Q Consensus 248 -----Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht-~eEle------------- 302 (407)
=+.+.++ +++||+.|+|+.+ .+ +++.+..=++.|.+.||.++++|-. ++|-+
T Consensus 91 GAfTGEIS~~mL---kd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pI~CvGEtleeReag~t~~vv~~Ql~ 167 (275)
T 1mo0_A 91 GAFTGEISPAMI---KDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGEKLEEREAGHTKDVNFRQLQ 167 (275)
T ss_dssp BSCTTCCCHHHH---HHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHH
T ss_pred CCccCcCCHHHH---HHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHH
Confidence 1555555 5679999999998 33 5666777778888999999999974 44322
Q ss_pred HHhc----ccCCcEEEeeccccccccccccccccccCchhHHHHhhcccc---cccc---cCCceEEEeeCCCCHHHHHH
Q 015424 303 RVLG----IEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERG---EIIR---QKNIIVVGESGLFTPDDIAY 372 (407)
Q Consensus 303 rAl~----l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~---~~i~---~~~v~vVAESGI~t~eD~~~ 372 (407)
.+++ + ...+|....-=.||||..- +++...+....+|. ..+- ..++.++-.|+++.-.....
T Consensus 168 ~~l~~~~~~-~~vvIAYEPvWAIGTGktA-------tpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~el 239 (275)
T 1mo0_A 168 AIVDKGVSW-ENIVIAYEPVWAIGTGKTA-------SGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAEL 239 (275)
T ss_dssp HHHTTTCCS-TTEEEEECCGGGTTTSCCC-------CHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCTTTHHHH
T ss_pred HHHhhhhhh-cCEEEEECCHHHhCCCCCC-------CHHHHHHHHHHHHHHHHHhhChhhcCcccEEEcCCCCHhhHHHH
Confidence 2232 2 2457888777676655321 22233332222221 0010 12468899999977777777
Q ss_pred HHHcCCCEEEEcccccCCCChHHHHHh
Q 015424 373 VQEAGVKAVLVGESIVKQDDPGKGITG 399 (407)
Q Consensus 373 l~~~GadaVLVGeaLmk~~dp~~~i~~ 399 (407)
+...++||+|||.+-+++++..+.++.
T Consensus 240 ~~~~diDG~LVGgASLka~~F~~Ii~~ 266 (275)
T 1mo0_A 240 GKKPDIDGFLVGGASLKPDFVKIINAR 266 (275)
T ss_dssp TTSTTCCEEEESGGGGSTHHHHHHHHH
T ss_pred hcCCCCCeeEechHHhChHHHHHHHHh
Confidence 778899999999999999888777653
No 194
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=96.71 E-value=0.013 Score=59.41 Aligned_cols=108 Identities=18% Similarity=0.239 Sum_probs=82.6
Q ss_pred HHHHHHcCCCEEEEeccC----------CCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccc
Q 015424 254 IYYARTKGADAVLLIAAV----------LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAIS 323 (407)
Q Consensus 254 I~eAr~~GADaVLLiaai----------L~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~ 323 (407)
+..++.+|||+|-..+-- ++.+.++.|.++++++||.++.|+++.+.++.+.++ ++++-|..|+.
T Consensus 162 a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~--vd~lkIgs~~~--- 236 (385)
T 3nvt_A 162 AESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDY--VDVIQIGARNM--- 236 (385)
T ss_dssp HHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTT--CSEEEECGGGT---
T ss_pred HHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhh--CCEEEECcccc---
Confidence 345678999988776522 567889999999999999999999999999999885 89999998888
Q ss_pred cccccccccccCchhHHHHhhcccccccccCCceEEEeeCC-CCHHHHHH----HHHcCCCEEEEcc
Q 015424 324 IFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGL-FTPDDIAY----VQEAGVKAVLVGE 385 (407)
Q Consensus 324 ~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI-~t~eD~~~----l~~~GadaVLVGe 385 (407)
..+ .....+.+ .+.+|+..-|. .|++++.. +.+.|..-+++-+
T Consensus 237 ------~n~----~LL~~~a~---------~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~ 284 (385)
T 3nvt_A 237 ------QNF----ELLKAAGR---------VDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCE 284 (385)
T ss_dssp ------TCH----HHHHHHHT---------SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred ------cCH----HHHHHHHc---------cCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEE
Confidence 432 23333322 35688888888 89998854 4566887676644
No 195
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=96.71 E-value=0.0067 Score=62.94 Aligned_cols=121 Identities=15% Similarity=0.073 Sum_probs=91.8
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCC-CcEEeccccCCHHHHHHHHHcCCCEEEEeccC----
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIAAV---- 271 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~-lPVL~KDFIid~~QI~eAr~~GADaVLLiaai---- 271 (407)
.+..+.++.+.+.|+..+.|.+...+..|..+.++.+++...+ +||+.++ +.+..+...+..+|||+|.+...-
T Consensus 241 ~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~~~~~Vi~G~-V~t~~~a~~l~~aGad~I~Vg~~~g~~~ 319 (503)
T 1me8_A 241 RDFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGN-IVDGEGFRYLADAGADFIKIGIGGGSIC 319 (503)
T ss_dssp SSHHHHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHHGGGSCEEEEE-ECSHHHHHHHHHHTCSEEEECSSCSTTC
T ss_pred hhHHHHHHHHHhhhccceEEecccCcccchhhHHHHHHHhCCCCceEeecc-ccCHHHHHHHHHhCCCeEEecccCCcCc
Confidence 4667778888888999998877666666677888888875225 8999876 577888888999999999885411
Q ss_pred ---------CCH-HHHHHHHHHHHHc------CCcEEE--EeCCHHHHHHHhcccCCcEEEeeccc
Q 015424 272 ---------LPD-LDIRYMTKICKLL------GLTALV--EVHDEREMDRVLGIEGIELIGINNRN 319 (407)
Q Consensus 272 ---------L~~-~~L~~Li~~a~~L------GL~aLV--EVht~eElerAl~l~Ga~iIGINnRd 319 (407)
.+. .-+.+..+.++.+ ++.++. -+++..|+.+|+.+ ||+.+++..+=
T Consensus 320 ~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlal-GA~~V~iG~~~ 384 (503)
T 1me8_A 320 ITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAM-GADFIMLGRYF 384 (503)
T ss_dssp CSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHT-TCSEEEESHHH
T ss_pred ccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHc-CCCEEEECchh
Confidence 122 2234455555555 899999 79999999999998 99999996553
No 196
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=96.69 E-value=0.0025 Score=61.35 Aligned_cols=162 Identities=14% Similarity=0.131 Sum_probs=101.1
Q ss_pred HHHHHHHHhc--C--CCCcEEeccc----------cCCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHH
Q 015424 227 FENLEAVRSA--G--VKCPLLCKEF----------IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKL 286 (407)
Q Consensus 227 ~edL~~Vr~a--~--v~lPVL~KDF----------Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~ 286 (407)
+-+|..+++. + .++.|=..|. =+.+.++ +.+||+.|+|+++ .+ +++.+..=++.|.+
T Consensus 44 ~~~L~~v~~~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~ 120 (256)
T 1aw2_A 44 ALFVDLAERTLTEAGSAIILGAQNTDLNNSGAFTGDMSPAML---KEFGATHIIIGHSERREYHAESDEFVAKKFAFLKE 120 (256)
T ss_dssp GGGHHHHHHHHHHHTCCCEEEESCCCSCSSBSCTTCCCHHHH---HHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCceEEeccCCCCCCCCccCccCHHHH---HHcCCCEEEECchhhccccCCCHHHHHHHHHHHHH
Confidence 5577666543 1 2455555541 1555565 4569999999998 22 44445554777888
Q ss_pred cCCcEEEEeCCH-HH-------------HHHHhcccCCc-----EEEeeccccccccccccccccccCchhHHHHhhccc
Q 015424 287 LGLTALVEVHDE-RE-------------MDRVLGIEGIE-----LIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGER 347 (407)
Q Consensus 287 LGL~aLVEVht~-eE-------------lerAl~l~Ga~-----iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~ 347 (407)
.||.++++|-.. +| ++.++..-+++ +|....-=.||||..- +.+...+....+|
T Consensus 121 ~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~vvIAYEPvWAIGTG~~A-------tpe~a~evh~~IR 193 (256)
T 1aw2_A 121 NGLTPVLCIGESDAQNEAGETMAVCARQLDAVINTQGVEALEGAIIAYEPIWAIGTGKAA-------TAEDAQRIHAQIR 193 (256)
T ss_dssp HTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHCGGGGTTCEEEECCTTTTTSSCCC-------CHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHcCCEEEEECCHHHhCCCCCC-------CHHHHHHHHHHHH
Confidence 999999999854 43 22333211233 7888777676665322 2222333222222
Q ss_pred ccc--cc---cCCceEEEeeCCCCHHHHHHHHHc-CCCEEEEcccccCCCChHHHHHh
Q 015424 348 GEI--IR---QKNIIVVGESGLFTPDDIAYVQEA-GVKAVLVGESIVKQDDPGKGITG 399 (407)
Q Consensus 348 ~~~--i~---~~~v~vVAESGI~t~eD~~~l~~~-GadaVLVGeaLmk~~dp~~~i~~ 399 (407)
.-. +- ...+.++..|+++ ++++..++.. ++||+|||.+-+++++..+.++.
T Consensus 194 ~~l~~~~~~~a~~vrIlYGGSV~-~~N~~~l~~~~diDG~LVGgAsL~a~~F~~Ii~~ 250 (256)
T 1aw2_A 194 AHIAEKSEAVAKNVVIQYGGSVK-PENAAAYFAQPDIDGALVGGAALDAKSFAAIAKA 250 (256)
T ss_dssp HHHHTTCHHHHHHCEEEECSCCC-TTTHHHHTTSTTCCEEEESGGGGCHHHHHHHHHH
T ss_pred HHHHhcChhhcccccEEEcCCCC-HHHHHHHHcCCCCCeeeecHHHhChHHHHHHHHH
Confidence 100 00 1246788888885 5999999888 99999999999998887766653
No 197
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=96.67 E-value=0.002 Score=61.76 Aligned_cols=198 Identities=12% Similarity=0.054 Sum_probs=121.3
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCC-cEEEEEecCCcCCCCHHHHHHHHhcCC--CCcEEeccc-----
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEF----- 247 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA-~aISVLTd~~~F~Gs~edL~~Vr~a~v--~lPVL~KDF----- 247 (407)
++-|+...|=. | ......++++.+...-. ..+-|+.-|. +-+|..+++. + ++.|=..|.
T Consensus 5 ~~~i~gNwKmn----~---~~~~~~~l~~~l~~~~~~~~vev~v~Pp-----~~~L~~v~~~-~~~~i~vgAQn~~~~~~ 71 (248)
T 1r2r_A 5 KFFVGGNWKMN----G---RKKNLGELITTLNAAKVPADTEVVCAPP-----TAYIDFARQK-LDPKIAVAAQNCYKVTN 71 (248)
T ss_dssp CEEEEEECCBC----C---CHHHHHHHHHHHHHSCCCTTEEEEEECC-----GGGHHHHHHH-SCTTSEEEESCCCSSSS
T ss_pred CCEEEEeCCcc----c---CHHHHHHHHHHHHhhccccCceEEEeCc-----HHHHHHHHHH-hhCCceEEeccCCCCCC
Confidence 35566677654 1 11245566666654211 2345554454 6688888764 3 366666552
Q ss_pred -----cCCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCCHHHHHH-------------
Q 015424 248 -----IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHDEREMDR------------- 303 (407)
Q Consensus 248 -----Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht~eEler------------- 303 (407)
=+.+.++ +.+||+.|+|+++ .+ +++.+..=++.|.+.||.++++|-...|-..
T Consensus 72 GA~TGEiS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~ 148 (248)
T 1r2r_A 72 GAFTGEISPGMI---KDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTK 148 (248)
T ss_dssp BSCTTCCCHHHH---HHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHH
T ss_pred CCccCccCHHHH---HHcCCCEEEECChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCChHHHHHHHHH
Confidence 1455554 5679999999998 33 5666777778888999999999986433222
Q ss_pred -Hhc----ccCCcEEEeeccccccccccccccccccCchhHHHHhhcccc---cccc---cCCceEEEeeCCCCHHHHHH
Q 015424 304 -VLG----IEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERG---EIIR---QKNIIVVGESGLFTPDDIAY 372 (407)
Q Consensus 304 -Al~----l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~---~~i~---~~~v~vVAESGI~t~eD~~~ 372 (407)
++. + ...+|....-=.||||..- +.+...+....+|. ..+- ..++.++..|+++.-.....
T Consensus 149 ~~l~~~~~~-~~~vIAYEPvWAIGTG~~A-------tpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l 220 (248)
T 1r2r_A 149 VIADNVKDW-SKVVLAYEPVWAIGTGKTA-------TPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKEL 220 (248)
T ss_dssp HHHHTCSCG-GGEEEEECCGGGSSSSCCC-------CHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHH
T ss_pred HHHhhhhhh-hceEEEEecHHhhCCCCCC-------CHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHH
Confidence 221 1 2347888777666655321 22223332222221 0010 12467889999977777777
Q ss_pred HHHcCCCEEEEcccccCCCChHHHH
Q 015424 373 VQEAGVKAVLVGESIVKQDDPGKGI 397 (407)
Q Consensus 373 l~~~GadaVLVGeaLmk~~dp~~~i 397 (407)
+...++||+|||.+-+++++..+.+
T Consensus 221 ~~~~diDG~LVGgAsL~a~~F~~ii 245 (248)
T 1r2r_A 221 ASQPDVDGFLVGGASLKPEFVDIIN 245 (248)
T ss_dssp HTSTTCCEEEESGGGGSTHHHHHHT
T ss_pred HcCCCCCeeEechHHhChHHHHHHH
Confidence 7788999999999999987765543
No 198
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=96.65 E-value=0.023 Score=57.00 Aligned_cols=127 Identities=12% Similarity=0.026 Sum_probs=81.7
Q ss_pred HHHHcCCCEEEEeccC--------------CCH-------HH---HHHHHHHHHH-cCC-cEEEEeC------------C
Q 015424 256 YARTKGADAVLLIAAV--------------LPD-------LD---IRYMTKICKL-LGL-TALVEVH------------D 297 (407)
Q Consensus 256 eAr~~GADaVLLiaai--------------L~~-------~~---L~~Li~~a~~-LGL-~aLVEVh------------t 297 (407)
.|.++|+|+|=|.++- .++ .+ +.++++.+++ .|- .+.|-++ +
T Consensus 174 ~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~ 253 (377)
T 2r14_A 174 RAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEP 253 (377)
T ss_dssp HHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCH
T ss_pred HHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCC
Confidence 3567899999997642 111 11 3444555443 453 4555543 1
Q ss_pred HHH----HHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHH
Q 015424 298 ERE----MDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYV 373 (407)
Q Consensus 298 ~eE----lerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l 373 (407)
.++ ++.+.+. |+++|-+-++.... .+ .. .+++...++.+. -++++|+-||| +++++.++
T Consensus 254 ~~~~~~la~~le~~-Gvd~i~v~~~~~~~---~~---~~-~~~~~~~~ik~~--------~~iPvi~~Ggi-~~~~a~~~ 316 (377)
T 2r14_A 254 EAMAFYLAGELDRR-GLAYLHFNEPDWIG---GD---IT-YPEGFREQMRQR--------FKGGLIYCGNY-DAGRAQAR 316 (377)
T ss_dssp HHHHHHHHHHHHHT-TCSEEEEECCC------------C-CCTTHHHHHHHH--------CCSEEEEESSC-CHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCCEEEEeCCcccC---CC---Cc-chHHHHHHHHHH--------CCCCEEEECCC-CHHHHHHH
Confidence 233 2333344 99999997765410 01 11 134445555543 25789999999 79999999
Q ss_pred HHcC-CCEEEEcccccCCCChHHHHHh
Q 015424 374 QEAG-VKAVLVGESIVKQDDPGKGITG 399 (407)
Q Consensus 374 ~~~G-adaVLVGeaLmk~~dp~~~i~~ 399 (407)
.+.| ||+|.+|.+++..++...++++
T Consensus 317 l~~g~aD~V~igR~~l~~P~l~~k~~~ 343 (377)
T 2r14_A 317 LDDNTADAVAFGRPFIANPDLPERFRL 343 (377)
T ss_dssp HHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred HHCCCceEEeecHHHHhCchHHHHHHc
Confidence 9998 9999999999999999888764
No 199
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=96.65 E-value=0.0026 Score=61.20 Aligned_cols=140 Identities=19% Similarity=0.185 Sum_probs=89.2
Q ss_pred CCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCC-HHH-------------HHHHhccc
Q 015424 249 VDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHD-ERE-------------MDRVLGIE 308 (407)
Q Consensus 249 id~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht-~eE-------------lerAl~l~ 308 (407)
+.+.++ +.+||+.|+|+++ .+ +++.+..=++.|.+.||.++++|-. ++| ++.++..-
T Consensus 78 iS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~ 154 (255)
T 1tre_A 78 TSAAML---KDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQ 154 (255)
T ss_dssp CCHHHH---HHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHH---HHcCCCEEEECccccccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcC
Confidence 556565 4559999999998 22 4444455577888899999999985 443 22333211
Q ss_pred CCc-----EEEeeccccccccccccccccccCchhHHHHhhcccccc--cc---cCCceEEEeeCCCCHHHHHHHHH-cC
Q 015424 309 GIE-----LIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEI--IR---QKNIIVVGESGLFTPDDIAYVQE-AG 377 (407)
Q Consensus 309 Ga~-----iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~--i~---~~~v~vVAESGI~t~eD~~~l~~-~G 377 (407)
+++ +|....-=.||||..- +.+...+....+|.-. +- ...+.++..|++ +++++..+.. .+
T Consensus 155 ~~~~~~~vvIAYEPvWAIGTG~~A-------tpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV-~~~N~~~l~~~~d 226 (255)
T 1tre_A 155 GAAAFEGAVIAYEPVWAIGTGKSA-------TPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSV-NASNAAELFAQPD 226 (255)
T ss_dssp CGGGGTTCEEEECCGGGSSSSCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECSCC-CTTTHHHHHTSTT
T ss_pred CHHHcCcEEEEECCHHHhCCCCCC-------CHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCC-CHHHHHHHHcCCC
Confidence 233 7888777676665322 2222333222222100 00 124678888888 6668988887 89
Q ss_pred CCEEEEcccccCCCChHHHHHh
Q 015424 378 VKAVLVGESIVKQDDPGKGITG 399 (407)
Q Consensus 378 adaVLVGeaLmk~~dp~~~i~~ 399 (407)
+||+|||.+-+++++..+.++.
T Consensus 227 iDG~LVGgAsL~a~~F~~Ii~~ 248 (255)
T 1tre_A 227 IDGALVGGASLKADAFAVIVKA 248 (255)
T ss_dssp CCEEEESGGGGCHHHHHHHHHH
T ss_pred CCeeEecHHHhChHHHHHHHHH
Confidence 9999999999998887766653
No 200
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=96.63 E-value=0.0044 Score=59.46 Aligned_cols=199 Identities=12% Similarity=0.038 Sum_probs=117.1
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCC-cEEEEEecCCcCCCCHHHHHHHHhcC--CCCcEEecccc----
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAG--VKCPLLCKEFI---- 248 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA-~aISVLTd~~~F~Gs~edL~~Vr~a~--v~lPVL~KDFI---- 248 (407)
++-|+...|=.- + .....++++.+...-. ..+-|+.-|. +-+|..+++.. .++.|=..|.-
T Consensus 5 ~~~i~gNwKmn~-~------~~~~~~l~~~l~~~~~~~~vev~v~Pp-----~~~L~~v~~~~~~~~i~vgAQn~~~~~G 72 (250)
T 2j27_A 5 QPIAAANWKCNG-S------QQSLSELIDLFNSTSINHDVQCVVAST-----FVHLAMTKERLSHPKFVIAAQNAIAKSG 72 (250)
T ss_dssp CCEEEEECCBCC-C------HHHHHHHHHHHHTCCCCSCCEEEEECC-----GGGHHHHHHHCCCTTEEEEESCCBSSCB
T ss_pred CcEEEEECcccc-C------HHHHHHHHHHHHhhccccCceEEEeCC-----HHHHHHHHHHhcCCCceEeecccCCCCC
Confidence 345666666431 1 1134556666643211 1234443343 66888777641 23555555521
Q ss_pred -----CCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCCH-HHH-------------HH
Q 015424 249 -----VDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHDE-REM-------------DR 303 (407)
Q Consensus 249 -----id~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht~-eEl-------------er 303 (407)
+.+.+ .+.+||+.|+|+++ .+ +++.+..=++.|.+.||.++++|-.. +|- +.
T Consensus 73 A~TGEiS~~m---L~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~ 149 (250)
T 2j27_A 73 AFTGEVSLPI---LKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAA 149 (250)
T ss_dssp SCTTCCBHHH---HHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred CcccccCHHH---HHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHhhcccHHHHHHHHHHH
Confidence 34444 45679999999998 22 56667677778889999999999954 332 11
Q ss_pred HhcccC-----CcEEEeeccccccccccccccccccCchhHHHHhhcccc---cccc---cCCceEEEeeCCCCHHHHHH
Q 015424 304 VLGIEG-----IELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERG---EIIR---QKNIIVVGESGLFTPDDIAY 372 (407)
Q Consensus 304 Al~l~G-----a~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~---~~i~---~~~v~vVAESGI~t~eD~~~ 372 (407)
++..-+ ..+|....-=.||||..- +.+...+....+|. ..+- ...+.++..|++ +++++..
T Consensus 150 ~l~~~~~~~~~~~vIAYEPvWAIGTG~~A-------tpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV-~~~N~~~ 221 (250)
T 2j27_A 150 IAKKLKKADWAKVVIAYEAVWAIGTGKVA-------TPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSV-NGKNART 221 (250)
T ss_dssp HHHTCCGGGGGGEEEEEECGGGTTSSCCC-------CHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSC-CTTTHHH
T ss_pred HHhcCCHHHhCCEEEEECCHHHhCCCCCC-------CHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCC-CHHHHHH
Confidence 332101 247888777676655321 22223332222221 0000 124678888888 5668888
Q ss_pred HH-HcCCCEEEEcccccCCCChHHHHH
Q 015424 373 VQ-EAGVKAVLVGESIVKQDDPGKGIT 398 (407)
Q Consensus 373 l~-~~GadaVLVGeaLmk~~dp~~~i~ 398 (407)
+. ..++||+|||.+-++ ++..+.++
T Consensus 222 l~~~~diDG~LVGgAsL~-~~F~~ii~ 247 (250)
T 2j27_A 222 LYQQRDVNGFLVGGASLK-PEFVDIIK 247 (250)
T ss_dssp HHTSTTCCEEEESGGGGS-TTHHHHHH
T ss_pred HHcCCCCCeeeeehHHHH-HHHHHHHH
Confidence 87 779999999999999 88776664
No 201
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=96.60 E-value=0.0031 Score=59.17 Aligned_cols=189 Identities=15% Similarity=0.115 Sum_probs=107.2
Q ss_pred CHHHHHHHHHHcCC--cEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHH---HHHHHHHcCCCEEEEeccCC
Q 015424 198 DPVEIARSYEKGGA--ACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAW---QIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 198 dp~~iA~ay~~~GA--~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~---QI~eAr~~GADaVLLiaaiL 272 (407)
+..+..+..++.|. .++=+-.| -|+.-++.-++.+|+.+..+++=+|=.-++.. -+..+..+|||+|.+-...
T Consensus 14 ~l~~~~~~~~~~~~~v~~~Kv~~d-~~~~~G~~~v~~l~~~~~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vtvH~~~- 91 (239)
T 1dbt_A 14 SAEETLAFLAPFQQEPLFVKVGME-LFYQEGPSIVKQLKERNCELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAG- 91 (239)
T ss_dssp SHHHHHHHTGGGTTSCCEEEECHH-HHHHHTHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGG-
T ss_pred CHHHHHHHHHHhcccCcEEEECHH-HHHHhCHHHHHHHHHCCCcEEEEeccccchHHHHHHHHHHHhcCCCEEEEeCcC-
Confidence 55555555666663 55323322 24455678888888752233322332213222 3556788999999997654
Q ss_pred CHHHHHHHHHHHHHc---CCc----EEEEeCCH---HHH-HHH-hcccCCcEE---EeeccccccccccccccccccCch
Q 015424 273 PDLDIRYMTKICKLL---GLT----ALVEVHDE---REM-DRV-LGIEGIELI---GINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 273 ~~~~L~~Li~~a~~L---GL~----aLVEVht~---eEl-erA-l~l~Ga~iI---GINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
....+..+++.+++. |+. +.|-+.+. +++ +.. +...-.++| +.++.++ |. ..|-...+
T Consensus 92 g~~~l~~~~~~~~~~~~~g~~~~~~~~V~~~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~-----G~--~g~v~~~~ 164 (239)
T 1dbt_A 92 GKKMMQAALEGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEES-----GL--DGVVCSVH 164 (239)
T ss_dssp CHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHT-----TC--SEEECCGG
T ss_pred CHHHHHHHHHHHHhhhccCCCCccEEEEEEcCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHh-----CC--CEEEECHH
Confidence 344478889999888 875 33444322 333 221 110001222 1112222 11 12333333
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHH----------HHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDD----------IAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD----------~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
...++.+. . + +..++.-+||+-... ...+.++|+|.++||++|++++||.++++++..
T Consensus 165 ~i~~lr~~-----~-~-~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~ 232 (239)
T 1dbt_A 165 EAKAIYQA-----V-S-PSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKAEDPVKAYKAVRL 232 (239)
T ss_dssp GHHHHTTT-----S-C-TTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHH
T ss_pred HHHHHHHh-----c-C-CCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhhcCCCCHHHHHHHHHH
Confidence 44445432 1 2 346778899964332 267789999999999999999999999988853
No 202
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=96.56 E-value=0.0059 Score=59.13 Aligned_cols=74 Identities=19% Similarity=0.069 Sum_probs=61.6
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCC---CCHHHHHHHHh-cCCC-CcEEeccccCCHHHHHHHHHcCCCEEEEeccCC
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFK---GSFENLEAVRS-AGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~---Gs~edL~~Vr~-a~v~-lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (407)
|| .+|+..++.|+.+|--+..+---+ .++++|+.+++ . .+ +||++-..|-+|.++++|.++|||+|++..++.
T Consensus 134 D~-~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~-~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~ 211 (268)
T 2htm_A 134 DL-VLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREK-ASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIA 211 (268)
T ss_dssp CH-HHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTT-TTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHH
T ss_pred CH-HHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhc-CCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 56 789999999999997666542221 15778999998 5 68 999999999999999999999999999999888
Q ss_pred C
Q 015424 273 P 273 (407)
Q Consensus 273 ~ 273 (407)
.
T Consensus 212 ~ 212 (268)
T 2htm_A 212 E 212 (268)
T ss_dssp T
T ss_pred C
Confidence 5
No 203
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=96.53 E-value=0.0039 Score=59.78 Aligned_cols=183 Identities=14% Similarity=0.094 Sum_probs=113.4
Q ss_pred CHHHHHHHHHHcCC-cEEEEEecCCcCCCCHHHHHHHHhcC--CCCcEEeccc----------cCCHHHHHHHHHcCCCE
Q 015424 198 DPVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAG--VKCPLLCKEF----------IVDAWQIYYARTKGADA 264 (407)
Q Consensus 198 dp~~iA~ay~~~GA-~aISVLTd~~~F~Gs~edL~~Vr~a~--v~lPVL~KDF----------Iid~~QI~eAr~~GADa 264 (407)
...++++.+...-. ..+-|+.-|. +-+|..+++.. .++.|=..|. =+.+.++ +++||+.
T Consensus 18 ~~~~~~~~l~~~~~~~~vev~v~Pp-----~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~mL---~d~G~~~ 89 (247)
T 1ney_A 18 SIKEIVERLNTASIPENVEVVICPP-----ATYLDYSVSLVKKPQVTVGAQNAYLKASGAFTGENSVDQI---KDVGAKY 89 (247)
T ss_dssp HHHHHHHHHHHSCCCTTEEEEEECC-----GGGHHHHHHHCCCTTEEEEESCCCSSSSBSCTTCCCHHHH---HHTTCCE
T ss_pred HHHHHHHHHHhhccccCceEEEeCc-----HHHHHHHHHHhcCCCceEEeccCCCCCCCCccCccCHHHH---HHcCCCE
Confidence 34556666654211 2344544444 66888887641 2355555551 1555554 5679999
Q ss_pred EEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCCHHHH--------------HHHhc----ccCCcEEEeecccc
Q 015424 265 VLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHDEREM--------------DRVLG----IEGIELIGINNRNL 320 (407)
Q Consensus 265 VLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht~eEl--------------erAl~----l~Ga~iIGINnRdL 320 (407)
|+|+++ .+ +++.+..=++.|.+.||.++++|-...|- +.++. + ...+|....-=.
T Consensus 90 ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~-~~~vIAYEPvWA 168 (247)
T 1ney_A 90 VILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDF-TNVVVAYEPVXA 168 (247)
T ss_dssp EEESCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHCCCC-TTEEEEECCGGG
T ss_pred EEECChhhccccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHHhchhhh-cCEEEEECChhh
Confidence 999998 33 56667777788889999999999854332 22332 2 345888887777
Q ss_pred ccccccccccccccCchhHHHHhhcccc---ccc---ccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChH
Q 015424 321 AISIFSYRTETFEVDNSNTKKLLEGERG---EII---RQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPG 394 (407)
Q Consensus 321 ~~~~~~~t~~Tf~vDl~~t~~L~~~~~~---~~i---~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~ 394 (407)
||||..-+ .+...+....+|. ..+ ...++.++..|+++.-.....+...++||+|||.+-++ ++..
T Consensus 169 IGTG~~At-------pe~a~evh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~~F~ 240 (247)
T 1ney_A 169 IGTGLAAT-------PEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLK-PEFV 240 (247)
T ss_dssp TTTSCCCC-------HHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEESSCCTTTGGGGTTCTTCCEEEESGGGGS-THHH
T ss_pred cCCCCCCC-------HHHHHHHHHHHHHHHHHhcChhhcccceEEEcCCcCHhHHHHHHcCCCCCeeEeehHHHH-HHHH
Confidence 66653222 2222222222211 000 01246788999997777777778889999999999999 7766
Q ss_pred HHH
Q 015424 395 KGI 397 (407)
Q Consensus 395 ~~i 397 (407)
+-+
T Consensus 241 ~Ii 243 (247)
T 1ney_A 241 DII 243 (247)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 204
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=96.53 E-value=0.0071 Score=58.05 Aligned_cols=200 Identities=11% Similarity=0.046 Sum_probs=118.8
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCC-cEEEEEecCCcCCCCHHHHHHHHhcC--CCCcEEecccc----
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAG--VKCPLLCKEFI---- 248 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA-~aISVLTd~~~F~Gs~edL~~Vr~a~--v~lPVL~KDFI---- 248 (407)
++-|+...|=. |. .....++++.+...-. ..+-|+.-|. +-+|..+++.. .++.|=..|.=
T Consensus 6 ~~~i~gNwKmn----~~---~~~~~~l~~~l~~~~~~~~vev~v~Pp-----~~~L~~v~~~~~~~~i~vgAQn~~~~~G 73 (251)
T 2vxn_A 6 QPIAAANWKCN----GT---TASIEKLVQVFNEHTISHDVQCVVAPT-----FVHIPLVQAKLRNPKYVISAQNAIAKSG 73 (251)
T ss_dssp CCEEEEECCSC----CC---HHHHHHHHHHHHHSCCCSCCEEEEECC-----GGGHHHHHHHCCCTTEEEEESCCBSSCS
T ss_pred CCEEEEecccc----cC---HHHHHHHHHHHHhhccccCceEEEECc-----HHHHHHHHHHhcCCCceEeecccCCCCC
Confidence 34566666654 10 1244556666654211 1244444443 66888777641 23555555521
Q ss_pred -----CCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCCHHHHH--------------H
Q 015424 249 -----VDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHDEREMD--------------R 303 (407)
Q Consensus 249 -----id~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht~eEle--------------r 303 (407)
+.+.+ .+++||+.|+|+++ .+ +++.+..=++.|.+.||.++++|-...|-. .
T Consensus 74 A~TGEiS~~m---L~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~ 150 (251)
T 2vxn_A 74 AFTGEVSMPI---LKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSA 150 (251)
T ss_dssp SCTTCCBHHH---HHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred CCcCcCCHHH---HHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHH
Confidence 33444 45679999999998 22 566677777788899999999998543322 2
Q ss_pred Hhccc-----CCcEEEeeccccccccccccccccccCchhHHHHhhcccc---cccc---cCCceEEEeeCCCCHHHHHH
Q 015424 304 VLGIE-----GIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERG---EIIR---QKNIIVVGESGLFTPDDIAY 372 (407)
Q Consensus 304 Al~l~-----Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~---~~i~---~~~v~vVAESGI~t~eD~~~ 372 (407)
++..- ...+|....-=.||||..- +.+...+....+|. ..+- ...+.++..|+++.-.....
T Consensus 151 ~l~~~~~~~~~~~vIAYEPvWAIGTG~~A-------tpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l 223 (251)
T 2vxn_A 151 IAAKLTKDAWNQVVLAYEPVWAIGTGKVA-------TPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATL 223 (251)
T ss_dssp HHTTCCTGGGGGEEEEECCGGGSSSSCCC-------CHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSCCTTTHHHH
T ss_pred HHhcCCHHHhCCEEEEECCHHHhCCCCCC-------CHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHHHHH
Confidence 33210 1237777776666655321 22223232222221 0010 12478899999977777777
Q ss_pred HHHcCCCEEEEcccccCCCChHHHHH
Q 015424 373 VQEAGVKAVLVGESIVKQDDPGKGIT 398 (407)
Q Consensus 373 l~~~GadaVLVGeaLmk~~dp~~~i~ 398 (407)
+...++||+|||.+-++ ++..+-++
T Consensus 224 ~~~~diDG~LVGgAsL~-~~F~~Ii~ 248 (251)
T 2vxn_A 224 YAKPDINGFLVGGASLK-PEFRDIID 248 (251)
T ss_dssp HTSTTCCEEEESGGGGS-TTHHHHHH
T ss_pred hcCCCCCeeeecHHHHH-HHHHHHHH
Confidence 77889999999999999 88776654
No 205
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=96.49 E-value=0.0041 Score=59.98 Aligned_cols=136 Identities=11% Similarity=0.043 Sum_probs=88.3
Q ss_pred HHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCCHHHHHH--------------Hhc-c--c--CCc
Q 015424 257 ARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHDEREMDR--------------VLG-I--E--GIE 311 (407)
Q Consensus 257 Ar~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht~eEler--------------Al~-l--~--Ga~ 311 (407)
.+++||+.|+|+++ .+ +++.+..=++.|.+.||.++++|-...|-.. +++ + . ...
T Consensus 90 L~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~~ 169 (261)
T 1m6j_A 90 LVDCQVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKEAWKNI 169 (261)
T ss_dssp HHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHSCTGGGGGE
T ss_pred HHHcCCCEEEECchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhCCCHHHHHHHHHHHHHhcCCHHHcCCE
Confidence 45679999999998 22 5566666777888999999999995433222 121 1 0 124
Q ss_pred EEEeeccccccccccccccccccCchhHHHHhhcccc---cccc---cCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcc
Q 015424 312 LIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERG---EIIR---QKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGE 385 (407)
Q Consensus 312 iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~---~~i~---~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGe 385 (407)
+|....-=.||||..- +.+...+....+|. ..+- ...+.++..|+++.-.....+...++||+|||.
T Consensus 170 vIAYEPvWAIGTG~~A-------tpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGg 242 (261)
T 1m6j_A 170 ILAYEPVWAIGTGKTA-------TPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKKADIDGFLVGG 242 (261)
T ss_dssp EEEECCGGGSSSSCCC-------CHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCCCTTTHHHHHTSTTCCEEEESG
T ss_pred EEEECCHHHhCCCCCC-------CHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCCcCHhhHHHHhcCCCCCeeEecH
Confidence 7787777666655321 22223332222221 0010 124678899999777777777788999999999
Q ss_pred cccCCCChHHHHHh
Q 015424 386 SIVKQDDPGKGITG 399 (407)
Q Consensus 386 aLmk~~dp~~~i~~ 399 (407)
+-+++++..+.++.
T Consensus 243 AsL~a~~F~~ii~~ 256 (261)
T 1m6j_A 243 ASLDAAKFKTIINS 256 (261)
T ss_dssp GGGSHHHHHHHHGG
T ss_pred HHhChHHHHHHHHH
Confidence 99998887776653
No 206
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=96.48 E-value=0.0067 Score=57.17 Aligned_cols=187 Identities=12% Similarity=0.098 Sum_probs=104.9
Q ss_pred CHHHHHHHHHHcCC--cEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE--eccccCCHH---HHHHHHHcCCCEEEEecc
Q 015424 198 DPVEIARSYEKGGA--ACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--CKEFIVDAW---QIYYARTKGADAVLLIAA 270 (407)
Q Consensus 198 dp~~iA~ay~~~GA--~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL--~KDFIid~~---QI~eAr~~GADaVLLiaa 270 (407)
+..+..+..++.|. .++=+-+|= |..-++.-++.+|+. +.+|+ +|=.-++.. -++.+..+|||+|.+-..
T Consensus 15 ~l~~~~~~v~~~~~~v~~~Kv~~d~-~~~~G~~~v~~lr~~--~~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vTvH~~ 91 (246)
T 2yyu_A 15 SKQEVERFLRPFAGTPLFVKVGMEL-YYQEGPAIVAFLKEQ--GHAVFLDLKLHDIPNTVKQAMKGLARVGADLVNVHAA 91 (246)
T ss_dssp SHHHHHHHHGGGTTSCCEEEECHHH-HHHHTHHHHHHHHHT--TCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGG
T ss_pred CHHHHHHHHHHhcccccEEEeCHHH-HHHhCHHHHHHHHHC--CCeEEEEeecccchHHHHHHHHHHHhcCCCEEEEECC
Confidence 55555566666664 553333322 444567788888875 33443 332213333 456678899999999765
Q ss_pred CCCHHHHHHHHHHHHH---cCCc-E-EEEe--CCH---HHH-HHH-hcccCCcEE---EeeccccccccccccccccccC
Q 015424 271 VLPDLDIRYMTKICKL---LGLT-A-LVEV--HDE---REM-DRV-LGIEGIELI---GINNRNLAISIFSYRTETFEVD 335 (407)
Q Consensus 271 iL~~~~L~~Li~~a~~---LGL~-a-LVEV--ht~---eEl-erA-l~l~Ga~iI---GINnRdL~~~~~~~t~~Tf~vD 335 (407)
. ....+..+++.+++ +|+. + ++-| .|. +++ +.. ....-.++| +.++.+. |. ..|-+.
T Consensus 92 ~-g~~~l~~~~~~~~~~~~~G~~~~~~lav~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~-----G~--~g~V~~ 163 (246)
T 2yyu_A 92 G-GRRMMEAAIEGLDAGTPSGRMRPRCIAVTQLTSTDERMLHEELWISRPLVETVAHYAALAKES-----GL--DGVVCS 163 (246)
T ss_dssp G-CHHHHHHHHHHHHHHSCSSSCCCEEEEESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHH-----TC--CEEECC
T ss_pred C-CHHHHHHHHHHHHhhcccCCcCCCEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHh-----CC--CEEEeC
Confidence 4 34447888898888 7854 2 3332 222 454 321 000001111 1112222 11 112222
Q ss_pred chhHHHHhhcccccccccCCceEEEeeCCCCH----H------HHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 336 NSNTKKLLEGERGEIIRQKNIIVVGESGLFTP----D------DIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 336 l~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~----e------D~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
.....+|.+. . +.. +++.-+||+.. . .+..+.++|+|.++||++|++++||.++++++..
T Consensus 164 ~~ei~~lr~~-----~-~~~-~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~ 233 (246)
T 2yyu_A 164 ANEAAFIKER-----C-GAS-FLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRAADPLRTYARLQH 233 (246)
T ss_dssp HHHHHHHHHH-----H-CTT-SEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHh-----c-CCC-CEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCCCCHHHHHHHHHH
Confidence 2223334332 1 223 36778999632 0 3667778999999999999999999999988854
No 207
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=96.48 E-value=0.0043 Score=60.65 Aligned_cols=72 Identities=15% Similarity=0.069 Sum_probs=57.6
Q ss_pred HHH--HHHHHcCCc---EEEEEecCCcCCCCHHHHHHHHhcCC--CCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCC
Q 015424 201 EIA--RSYEKGGAA---CLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (407)
Q Consensus 201 ~iA--~ay~~~GA~---aISVLTd~~~F~Gs~edL~~Vr~a~v--~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (407)
++| .+|...|+. -+ |-.|-......++.++.+++. + ++||.....|.++.|+.++..+|||+|.++.++..
T Consensus 184 e~A~~~aYa~~gad~G~~l-V~LD~~~~~v~~e~V~~I~~~-~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~ 261 (286)
T 3vk5_A 184 STEEIDRYLHVARAFGFHM-VYLYSRNEHVPPEVVRHFRKG-LGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQ 261 (286)
T ss_dssp SSHHHHHHHHHHHHTTCSE-EEEECSSSCCCHHHHHHHHHH-SCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSS
T ss_pred HHHHHHHHHHHHHHcCCCE-EEEcCCCCcCCHHHHHHHHHh-cCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhc
Confidence 666 666655542 22 223344466788999999987 7 89999999999999999999999999999999997
Q ss_pred H
Q 015424 274 D 274 (407)
Q Consensus 274 ~ 274 (407)
+
T Consensus 262 d 262 (286)
T 3vk5_A 262 P 262 (286)
T ss_dssp T
T ss_pred C
Confidence 7
No 208
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=96.45 E-value=0.0082 Score=57.74 Aligned_cols=195 Identities=10% Similarity=0.043 Sum_probs=116.0
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCC-cEEEEEecCCcCCCCHHHHHHHHhcC-CCCcEEeccc------
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAG-VKCPLLCKEF------ 247 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA-~aISVLTd~~~F~Gs~edL~~Vr~a~-v~lPVL~KDF------ 247 (407)
++-|+...|=. | |. .....++++.+..... ..+-|+.-|. +-+|..+++.. .++.|=..|.
T Consensus 6 ~~~i~gNWKmn-~--~~---~~~~~~l~~~l~~~~~~~~~ev~v~Pp-----~~~L~~v~~~~~~~i~vgAQn~~~~~~G 74 (255)
T 3qst_A 6 TFFVGGNWKAN-P--KT---VQEAEKLVEMLNGAKVEGNVEVVVAAP-----FVFLPTLQQKLRKDWKVSAENVFTKPNG 74 (255)
T ss_dssp CCEEEEECCSC-C--SS---HHHHHHHHHHHHTCCCCSSCEEEEECC-----GGGHHHHHHHSCTTSEEEESCCCSSSSS
T ss_pred CcEEEEEhhcc-c--CC---HHHHHHHHHHHHhhcccCCceEEEeCC-----HHHHHHHHHHhccCCeEEecccCCCCCC
Confidence 35677777654 2 11 1134566666654311 1134443343 66888887641 2566666551
Q ss_pred ----cCCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCCHHH--------------HHH
Q 015424 248 ----IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHDERE--------------MDR 303 (407)
Q Consensus 248 ----Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht~eE--------------ler 303 (407)
=+.+.++ +++||+.|+|+++ .+ +++.+..=++.|.+.||.++++|-...| ++.
T Consensus 75 A~TGEiS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~ 151 (255)
T 3qst_A 75 AFTGEVTVPMI---KSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENGMKIIYCCGEHLSEREAGKASEFVSAQIEK 151 (255)
T ss_dssp SCTTCCCHHHH---HTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHH
T ss_pred CccCccCHHHH---HHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHHcCCHHHHHHHHHHH
Confidence 1555554 5679999999998 33 4555566678888999999999985433 444
Q ss_pred Hhcc-----cCCcEEEeeccccccccccccccccccCchhHHHHhhcccc---ccc---ccCCceEEEeeCCCCHHHHHH
Q 015424 304 VLGI-----EGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERG---EII---RQKNIIVVGESGLFTPDDIAY 372 (407)
Q Consensus 304 Al~l-----~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~---~~i---~~~~v~vVAESGI~t~eD~~~ 372 (407)
++.- -...+|....-=.||||..-++ +...+....+|. ..+ ..+.+.++..|+++.-.....
T Consensus 152 ~l~~~~~~~~~~~vIAYEPvWAIGTG~~Atp-------e~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l 224 (255)
T 3qst_A 152 MIPAIPAGKWDDVVIAYEPIWAIGTGKVAST-------QDAQEMCKVIRDILAAKVGADIANKVRILYGGSVKPNNCNEL 224 (255)
T ss_dssp HGGGSCTTCGGGEEEEECCGGGSSSSCCCCH-------HHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCTTTHHHH
T ss_pred HHccCCHHHhCCEEEEECCHHHhcCCCCCCH-------HHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCcCHhHHHHH
Confidence 5421 0124777776666665543222 222222221111 000 012468889999977776777
Q ss_pred HHHcCCCEEEEcccccCCCC
Q 015424 373 VQEAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 373 l~~~GadaVLVGeaLmk~~d 392 (407)
+...++||+|||.+=.+ ++
T Consensus 225 ~~~~diDG~LVGgASL~-~~ 243 (255)
T 3qst_A 225 AACPDVDGFLVGGASLE-AG 243 (255)
T ss_dssp HHSTTCCEEEECGGGGS-TT
T ss_pred hcCCCCCEEEeeHHHhh-HH
Confidence 77889999999999999 45
No 209
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=96.44 E-value=0.0055 Score=60.67 Aligned_cols=90 Identities=24% Similarity=0.162 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHcCCcEEEEEe---cCC----cCC-CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEe
Q 015424 198 DPVEIARSYEKGGAACLSILT---DEK----YFK-GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLI 268 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLT---d~~----~F~-Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLi 268 (407)
+..++|+.+++.|++.|+|-. .+. ... -..+.+..+|+. +++||+.-..|.++.+..++...| ||.|.+.
T Consensus 240 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 240 DTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKR-VGLRTGAVGLITTPEQAETLLQAGSADLVLLG 318 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHH-HCCEEEECSSCCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHH-cCceEEEECCCCCHHHHHHHHHCCCceEEEec
Confidence 577889999999999999973 111 011 256778889987 899999999999999999999999 9999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCc
Q 015424 269 AAVLPDLDIRYMTKICKLLGLT 290 (407)
Q Consensus 269 aaiL~~~~L~~Li~~a~~LGL~ 290 (407)
-.++.+.+| ..+.++.+|.+
T Consensus 319 R~~lanPdl--~~k~~~~l~~~ 338 (349)
T 3hgj_A 319 RVLLRDPYF--PLRAAKALGVA 338 (349)
T ss_dssp THHHHCTTH--HHHHHHHTTCC
T ss_pred HHHHhCchH--HHHHHHHCCCC
Confidence 888876676 55666778764
No 210
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=96.44 E-value=0.0048 Score=57.13 Aligned_cols=92 Identities=20% Similarity=0.270 Sum_probs=70.4
Q ss_pred cCCCC-CCCCHHHHHHHHHHcCCcEEEEEe---cCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHc-----
Q 015424 190 RGILR-EDFDPVEIARSYEKGGAACLSILT---DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK----- 260 (407)
Q Consensus 190 kG~i~-~~~dp~~iA~ay~~~GA~aISVLT---d~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~----- 260 (407)
.|+.. ...++.++++.+++.|+..|-+.+ |..+++=+++.++.+++. +++||+.-..|.++.++.+.+.+
T Consensus 136 ~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~-~~iPvia~GGI~~~~d~~~~~~~~~~~~ 214 (241)
T 1qo2_A 136 KGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGTLQEHDFSLTKKIAIE-AEVKVLAAGGISSENSLKTAQKVHTETN 214 (241)
T ss_dssp TTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHHHHTCCCCHHHHHHHHHH-HTCEEEEESSCCSHHHHHHHHHHHHHTT
T ss_pred CCceecCCCCHHHHHHHHHhCCCCEEEEEeecccccCCcCCHHHHHHHHHh-cCCcEEEECCCCCHHHHHHHHhcccccC
Confidence 45433 234899999999999999887743 122344478999999987 79999999999999999999888
Q ss_pred C-CCEEEEeccCCCH-HHHHHHHH
Q 015424 261 G-ADAVLLIAAVLPD-LDIRYMTK 282 (407)
Q Consensus 261 G-ADaVLLiaaiL~~-~~L~~Li~ 282 (407)
| ||+|+++.+++.. .++.++.+
T Consensus 215 G~adgv~vgsal~~~~~~~~~~~~ 238 (241)
T 1qo2_A 215 GLLKGVIVGRAFLEGILTVEVMKR 238 (241)
T ss_dssp TSEEEEEECHHHHTTSSCHHHHHH
T ss_pred CeEeEEEeeHHHHcCCCCHHHHHH
Confidence 9 9999999887733 34544444
No 211
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=96.43 E-value=0.02 Score=54.10 Aligned_cols=167 Identities=19% Similarity=0.145 Sum_probs=99.7
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEe-ccc----cCCH---HHHHHHHHcCCCEEEEe
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC-KEF----IVDA---WQIYYARTKGADAVLLI 268 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~-KDF----Iid~---~QI~eAr~~GADaVLLi 268 (407)
.++.++++...+.|..++-| ++..+..+++.--.+.|-. =+| -... .++.+ ...|||.|-+.
T Consensus 17 ~~i~~l~~~A~~~~~~aVcv---------~p~~v~~a~~~l~gv~v~tvigFP~G~~~~~~k~~E~~~-i~~GAdEID~V 86 (226)
T 1vcv_A 17 DEAVAGARKAEELGVAAYCV---------NPIYAPVVRPLLRKVKLCVVADFPFGALPTASRIALVSR-LAEVADEIDVV 86 (226)
T ss_dssp HHHHHHHHHHHHHTCSEEEE---------CGGGHHHHGGGCSSSEEEEEESTTTCCSCHHHHHHHHHH-HTTTCSEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEE---------CHHHHHHHHHHhCCCeEEEEeCCCCCCCchHHHHHHHHH-HHCCCCEEEEe
Confidence 35666777778889888887 3667777775311233321 133 1111 36667 78999999665
Q ss_pred ccCC---CH------HHHHHHHHHHHHcCCcEEEEeC--CHHHHHHHhcc---cCCcEEEeecccccccccc--------
Q 015424 269 AAVL---PD------LDIRYMTKICKLLGLTALVEVH--DEREMDRVLGI---EGIELIGINNRNLAISIFS-------- 326 (407)
Q Consensus 269 aaiL---~~------~~L~~Li~~a~~LGL~aLVEVh--t~eElerAl~l---~Ga~iIGINnRdL~~~~~~-------- 326 (407)
.-+- +. +++..+.+.|+..+|.+++|.. +.+|..++-.+ .||++|=.. |||+
T Consensus 87 inig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTS------TGf~~~~~~~~~ 160 (226)
T 1vcv_A 87 APIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSS------TGFAEEAYAARQ 160 (226)
T ss_dssp CCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECC------CSCCCHHHHHHT
T ss_pred cchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeC------CCCCcccccccc
Confidence 4322 21 3455555555556788899987 66666555433 288887663 2222
Q ss_pred --ccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHc---CCC--EEEEccc
Q 015424 327 --YRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA---GVK--AVLVGES 386 (407)
Q Consensus 327 --~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~---Gad--aVLVGea 386 (407)
....|+ -|.....+.++. .+..+.+-+.|||+|.+|+..+.++ |++ -|-+|.+
T Consensus 161 ~~~~gAt~-~dv~lm~~~i~~------~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 161 GNPVHSTP-ERAAAIARYIKE------KGYRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp TCCSSCCH-HHHHHHHHHHHH------HTCCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEES
T ss_pred CCCCCCCH-HHHHHHHHHHHH------hCCCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecC
Confidence 111222 133333333221 1345789999999999999999999 988 3344543
No 212
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=96.42 E-value=0.013 Score=58.95 Aligned_cols=118 Identities=12% Similarity=0.111 Sum_probs=81.8
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEecc---CC--
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---VL-- 272 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa---iL-- 272 (407)
+..+.++.+.++|++.|-+-+-..+...-.+.++.+|+...++||+.|. +.++.+...+..+|||+|.+... ..
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~-V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~t 178 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGN-VATYAGADYLASCGADIIKAGIGGGSVCST 178 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEE-ECSHHHHHHHHHTTCSEEEECCSSSSCHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcC-cCCHHHHHHHHHcCCCEEEEcCCCCcCccc
Confidence 4567899999999998877543332222246788888752379999976 57888888899999999998422 11
Q ss_pred ------CHHHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhcccCCcEEEeecc
Q 015424 273 ------PDLDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNR 318 (407)
Q Consensus 273 ------~~~~L~~Li~~a~~LGL~aLV--EVht~eElerAl~l~Ga~iIGINnR 318 (407)
...++..+.+.+.... .+++ -+.+..++.+++.+ ||+.|++-.+
T Consensus 179 r~~~g~g~p~l~aI~~~~~~~~-PVIAdGGI~~~~di~kALa~-GAd~V~iGr~ 230 (361)
T 3r2g_A 179 RIKTGFGVPMLTCIQDCSRADR-SIVADGGIKTSGDIVKALAF-GADFVMIGGM 230 (361)
T ss_dssp HHHHCCCCCHHHHHHHHTTSSS-EEEEESCCCSHHHHHHHHHT-TCSEEEESGG
T ss_pred cccCCccHHHHHHHHHHHHhCC-CEEEECCCCCHHHHHHHHHc-CCCEEEEChH
Confidence 0124444544433333 4444 47899999999998 9999999544
No 213
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=96.38 E-value=0.034 Score=58.08 Aligned_cols=91 Identities=20% Similarity=0.342 Sum_probs=66.8
Q ss_pred HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEecc---CC--CHHHHHHHHHHHHHc-------CCcEEEE
Q 015424 227 FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---VL--PDLDIRYMTKICKLL-------GLTALVE 294 (407)
Q Consensus 227 ~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa---iL--~~~~L~~Li~~a~~L-------GL~aLVE 294 (407)
.++++.+|+. +++||+.|+. .++.....+..+|||+|.+.-. -+ ....+..+.+..+.+ ++.+++.
T Consensus 332 ~~~i~~lr~~-~~~PvivKgv-~~~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~ 409 (511)
T 1kbi_A 332 WKDIEELKKK-TKLPIVIKGV-QRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD 409 (511)
T ss_dssp HHHHHHHHHH-CSSCEEEEEE-CSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE
T ss_pred HHHHHHHHHH-hCCcEEEEeC-CCHHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE
Confidence 7889999987 8999999964 4566777788999999999321 11 112344444444444 5677774
Q ss_pred --eCCHHHHHHHhcccCCcEEEeecccc
Q 015424 295 --VHDEREMDRVLGIEGIELIGINNRNL 320 (407)
Q Consensus 295 --Vht~eElerAl~l~Ga~iIGINnRdL 320 (407)
|++.+++.+++.+ ||+.|+|-..-+
T Consensus 410 GGI~~g~Dv~kaLal-GAdaV~iGr~~l 436 (511)
T 1kbi_A 410 GGVRRGTDVLKALCL-GAKGVGLGRPFL 436 (511)
T ss_dssp SSCCSHHHHHHHHHH-TCSEEEECHHHH
T ss_pred CCCCCHHHHHHHHHc-CCCEEEECHHHH
Confidence 7799999999998 999999965444
No 214
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.37 E-value=0.007 Score=64.53 Aligned_cols=46 Identities=17% Similarity=0.152 Sum_probs=42.1
Q ss_pred CceEEEeeCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHhh
Q 015424 355 NIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITGL 400 (407)
Q Consensus 355 ~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~L 400 (407)
++++|+-|||.+++++.++.+.| ||+|-+|.+++..+|...++++=
T Consensus 294 ~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~~~~g 340 (690)
T 3k30_A 294 TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRDG 340 (690)
T ss_dssp SSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHTT
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHHHHcC
Confidence 57899999999999999999988 99999999999999988887653
No 215
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=96.34 E-value=0.017 Score=53.32 Aligned_cols=147 Identities=13% Similarity=0.129 Sum_probs=90.8
Q ss_pred HHHcCCcEEEEEecCCcCCCCH-HHHHHHHhcCCCCcEEeccc----cCCHHHHHH-HHHcCCCEEEEeccCCCHHHHHH
Q 015424 206 YEKGGAACLSILTDEKYFKGSF-ENLEAVRSAGVKCPLLCKEF----IVDAWQIYY-ARTKGADAVLLIAAVLPDLDIRY 279 (407)
Q Consensus 206 y~~~GA~aISVLTd~~~F~Gs~-edL~~Vr~a~v~lPVL~KDF----Iid~~QI~e-Ar~~GADaVLLiaaiL~~~~L~~ 279 (407)
+.+..+..+-+|+-.- +++ +.+..++++ .+.|++.-|. --|.+-+.- +...++|+|+=- . ..
T Consensus 25 al~s~~~~ifll~g~i---~~l~~~v~~lk~~-~K~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsT-----k---~~ 92 (192)
T 3kts_A 25 ILELDLTYMVMLETHV---AQLKALVKYAQAG-GKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIIST-----R---GN 92 (192)
T ss_dssp HTTSSCCEEEECSEET---TTHHHHHHHHHHT-TCEEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEES-----C---HH
T ss_pred HHcCCCCEEEEecCcH---HHHHHHHHHHHHc-CCeEEEecCchhccCCcHHHHHHHHhCCCCCEEEeC-----c---HH
Confidence 3344577777765221 233 333445665 6778776554 467776654 445699997642 1 34
Q ss_pred HHHHHHHcCCcEEEEeC--CHHHHHHHhcc---cCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccC
Q 015424 280 MTKICKLLGLTALVEVH--DEREMDRVLGI---EGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQK 354 (407)
Q Consensus 280 Li~~a~~LGL~aLVEVh--t~eElerAl~l---~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~ 354 (407)
+++.|+++||.++-=+- |-.-++...+. ..+|+|=+- +| +-++...++.+. .
T Consensus 93 ~i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiL--------PG-------i~p~iI~~i~~~--------~ 149 (192)
T 3kts_A 93 AIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELL--------PG-------IIPEQVQKMTQK--------L 149 (192)
T ss_dssp HHHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEE--------CT-------TCHHHHHHHHHH--------H
T ss_pred HHHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEEC--------Cc-------hhHHHHHHHHHh--------c
Confidence 78899999999843322 33333333321 256665331 11 122333444332 3
Q ss_pred CceEEEeeCCCCHHHHHHHHHcCCCEEEEcccc
Q 015424 355 NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 387 (407)
Q Consensus 355 ~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 387 (407)
++++|+.|+|.+.||+..+.++||++|..|+.-
T Consensus 150 ~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~ 182 (192)
T 3kts_A 150 HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKH 182 (192)
T ss_dssp CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGG
T ss_pred CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHH
Confidence 679999999999999999999999999998753
No 216
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=96.33 E-value=0.04 Score=55.26 Aligned_cols=130 Identities=12% Similarity=0.035 Sum_probs=83.2
Q ss_pred HHHHHcCCCEEEEeccC-------C-------CH-------HH---HHHHHHHHHH-cCC-cEEEEeCC-----------
Q 015424 255 YYARTKGADAVLLIAAV-------L-------PD-------LD---IRYMTKICKL-LGL-TALVEVHD----------- 297 (407)
Q Consensus 255 ~eAr~~GADaVLLiaai-------L-------~~-------~~---L~~Li~~a~~-LGL-~aLVEVht----------- 297 (407)
..|.++|.|+|=|.++- | ++ .+ +.++++.+++ .|- .+.|.++-
T Consensus 174 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~ 253 (376)
T 1icp_A 174 RNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTN 253 (376)
T ss_dssp HHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSC
T ss_pred HHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCC
Confidence 34678999999997752 1 11 11 3444554443 453 56777751
Q ss_pred ----HHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHH
Q 015424 298 ----EREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYV 373 (407)
Q Consensus 298 ----~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l 373 (407)
..++-+.++-.|+++|-+-++.... .+ ....+.+...++.+. -++++|+-||| +++++.++
T Consensus 254 ~~~~~~~la~~le~~Gvd~i~v~~~~~~~---~~---~~~~~~~~~~~vr~~--------~~iPvi~~G~i-~~~~a~~~ 318 (376)
T 1icp_A 254 PTALGLYMVESLNKYDLAYCHVVEPRMKT---AW---EKIECTESLVPMRKA--------YKGTFIVAGGY-DREDGNRA 318 (376)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEECCSCCC------------CCCCSHHHHHH--------CCSCEEEESSC-CHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCcccC---CC---CccccHHHHHHHHHH--------cCCCEEEeCCC-CHHHHHHH
Confidence 1234344433489999887664410 00 000133344455443 24689999999 99999999
Q ss_pred HHcC-CCEEEEcccccCCCChHHHHHh
Q 015424 374 QEAG-VKAVLVGESIVKQDDPGKGITG 399 (407)
Q Consensus 374 ~~~G-adaVLVGeaLmk~~dp~~~i~~ 399 (407)
.+.| ||.|.+|.+++..++....+++
T Consensus 319 l~~g~aD~V~~gR~~l~~P~l~~k~~~ 345 (376)
T 1icp_A 319 LIEDRADLVAYGRLFISNPDLPKRFEL 345 (376)
T ss_dssp HHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred HHCCCCcEEeecHHHHhCccHHHHHHc
Confidence 9998 9999999999999998887764
No 217
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.31 E-value=0.026 Score=56.13 Aligned_cols=130 Identities=15% Similarity=0.239 Sum_probs=78.3
Q ss_pred CHHHHHHHHHcCCCEEEEeccCCCH----------HHHHHHHHHHHHcCCcEEEEeC-------C-------------HH
Q 015424 250 DAWQIYYARTKGADAVLLIAAVLPD----------LDIRYMTKICKLLGLTALVEVH-------D-------------ER 299 (407)
Q Consensus 250 d~~QI~eAr~~GADaVLLiaaiL~~----------~~L~~Li~~a~~LGL~aLVEVh-------t-------------~e 299 (407)
..+.+.+|+.+|||+|-+-+-.-++ +++.++.+.|+..||..|+|+= + ..
T Consensus 112 ~~~sve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~ 191 (332)
T 3iv3_A 112 VDWSIKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVN 191 (332)
T ss_dssp TTCCHHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHH
T ss_pred cccCHHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHH
Confidence 3366899999999999876655422 3577788889999999999981 1 12
Q ss_pred HH-HHH--hcccCCcEEEeecc---ccccccccccccccccCc----hhHHHHhhcccccccccCCceE-EEeeCCCCH-
Q 015424 300 EM-DRV--LGIEGIELIGINNR---NLAISIFSYRTETFEVDN----SNTKKLLEGERGEIIRQKNIIV-VGESGLFTP- 367 (407)
Q Consensus 300 El-erA--l~l~Ga~iIGINnR---dL~~~~~~~t~~Tf~vDl----~~t~~L~~~~~~~~i~~~~v~v-VAESGI~t~- 367 (407)
.+ +.+ +++ |+|++=++-. ++- -++.......+- +.+.++... ..+++ +..||.+..
T Consensus 192 ~a~R~~~~~el-GaDv~Kve~p~~~~~v---~g~~~~~~~y~~~ea~~~f~~~~~a--------~~~P~v~lsgG~~~~~ 259 (332)
T 3iv3_A 192 DAMKVFSAERF-GIDVLKVEVPVNMVYV---EGFAEGEVVYSKEEAAQAFREQEAS--------TDLPYIYLSAGVSAEL 259 (332)
T ss_dssp HHHHHHTSGGG-CCSEEEECCSSCGGGB---TTTCSSCCCBCHHHHHHHHHHHHHT--------CSSCEEEECTTCCHHH
T ss_pred HHHHHHhhcCc-CCcEEEEecCCChhhh---cccccccccccHHHHHHHHHHHHhc--------CCCCEEEECCCCCHHH
Confidence 22 223 465 9999988521 100 000000001111 223444332 23554 468888432
Q ss_pred --HHHHHHHHcCC--CEEEEcccccCCC
Q 015424 368 --DDIAYVQEAGV--KAVLVGESIVKQD 391 (407)
Q Consensus 368 --eD~~~l~~~Ga--daVLVGeaLmk~~ 391 (407)
+.++..+++|+ .||++|.++.+..
T Consensus 260 fl~~v~~A~~aGa~f~Gv~~GRnvwq~~ 287 (332)
T 3iv3_A 260 FQETLVFAHKAGAKFNGVLCGRATWAGS 287 (332)
T ss_dssp HHHHHHHHHHHTCCCCEEEECHHHHTTH
T ss_pred HHHHHHHHHHcCCCcceEEeeHHHHHhh
Confidence 23455677899 9999999998873
No 218
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.28 E-value=0.03 Score=53.69 Aligned_cols=88 Identities=23% Similarity=0.326 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhccccccccc
Q 015424 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQ 353 (407)
Q Consensus 274 ~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~ 353 (407)
.+.++.|.++++++||.++.|+++...++.+.++ ++++-|..|+. .. .....++.+
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~--vd~~kIga~~~---------~n----~~ll~~~a~--------- 128 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKY--SDILQIGARNS---------QN----FELLKEVGK--------- 128 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH--CSEEEECGGGT---------TC----HHHHHHHTT---------
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh--CCEEEECcccc---------cC----HHHHHHHHh---------
Confidence 7789999999999999999999999999999886 79999999988 32 233334433
Q ss_pred CCceEEEeeCCC-CHHHHHHHH----HcCCCEEEEcc
Q 015424 354 KNIIVVGESGLF-TPDDIAYVQ----EAGVKAVLVGE 385 (407)
Q Consensus 354 ~~v~vVAESGI~-t~eD~~~l~----~~GadaVLVGe 385 (407)
.+.+|+..-|.. |++++.... ..|..-+.+-+
T Consensus 129 ~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~ 165 (262)
T 1zco_A 129 VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCE 165 (262)
T ss_dssp SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 356888899998 999886654 55765455443
No 219
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=96.27 E-value=0.0037 Score=61.03 Aligned_cols=79 Identities=13% Similarity=0.108 Sum_probs=61.2
Q ss_pred CHHHHHHHHHHcCCcEEEEEec---------------CCcCCC------CHHHHHHHHhcCC--CCcEEeccccCCHHHH
Q 015424 198 DPVEIARSYEKGGAACLSILTD---------------EKYFKG------SFENLEAVRSAGV--KCPLLCKEFIVDAWQI 254 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd---------------~~~F~G------s~edL~~Vr~a~v--~lPVL~KDFIid~~QI 254 (407)
+..++|+..++.|+++|.|-.- ...+.| +++.+..+++. + ++||+.-..|.++.++
T Consensus 226 ~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~-~~~~ipVi~~GGI~~~~da 304 (336)
T 1f76_A 226 ELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLE-LNGRLPIIGVGGIDSVIAA 304 (336)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHH-HTTSSCEEEESSCCSHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHH-hCCCCCEEEECCCCCHHHH
Confidence 5678899999999999998421 011223 24677788876 6 8999999999999999
Q ss_pred HHHHHcCCCEEEEeccCCC-HHHH
Q 015424 255 YYARTKGADAVLLIAAVLP-DLDI 277 (407)
Q Consensus 255 ~eAr~~GADaVLLiaaiL~-~~~L 277 (407)
.++..+|||+|.+...++- +.++
T Consensus 305 ~~~l~~GAd~V~igr~~l~~~P~~ 328 (336)
T 1f76_A 305 REKIAAGASLVQIYSGFIFKGPPL 328 (336)
T ss_dssp HHHHHHTCSEEEESHHHHHHCHHH
T ss_pred HHHHHCCCCEEEeeHHHHhcCcHH
Confidence 9999999999999887763 3344
No 220
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.18 E-value=0.021 Score=53.61 Aligned_cols=82 Identities=16% Similarity=0.070 Sum_probs=63.1
Q ss_pred HHHHHHHHHcCCcEEEEE----ecC-CcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCH
Q 015424 200 VEIARSYEKGGAACLSIL----TDE-KYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVL----Td~-~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~ 274 (407)
.+.|+.+++.||+.|.+. |.. +-+.-+++.++.+++. ++||+.-..|-++.++.+++.+|||+|+++.++..+
T Consensus 139 ~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~p 216 (232)
T 3igs_A 139 VDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA--GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITRL 216 (232)
T ss_dssp HHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHCH
T ss_pred HHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcCH
Confidence 356788889999999642 221 2355678888888874 899999999999999999999999999999887765
Q ss_pred HH-HHHHHHH
Q 015424 275 LD-IRYMTKI 283 (407)
Q Consensus 275 ~~-L~~Li~~ 283 (407)
.+ .++|.+.
T Consensus 217 ~~~~~~~~~~ 226 (232)
T 3igs_A 217 EHICGWYNDA 226 (232)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 43 3445443
No 221
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=96.16 E-value=0.0089 Score=57.31 Aligned_cols=154 Identities=13% Similarity=0.087 Sum_probs=95.1
Q ss_pred CHHHHHHHHhcCC--CCcEEeccc----------cCCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHc
Q 015424 226 SFENLEAVRSAGV--KCPLLCKEF----------IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLL 287 (407)
Q Consensus 226 s~edL~~Vr~a~v--~lPVL~KDF----------Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~L 287 (407)
.+-+|..+++. . ++.|=..|. =+.+.++ +++||+.|+|+++ .+ +++.+..=++.|.+.
T Consensus 44 p~~~L~~v~~~-~~~~i~vgAQn~~~~~~GA~TGEiS~~mL---~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~ 119 (249)
T 3th6_A 44 PAPYLDYCRSL-LPPSVALAAQNCYKVEQGAFTGEISPGMI---KDCGGQWVILGHSERRHVFKEDDVLIGEKIKHALES 119 (249)
T ss_dssp CGGGHHHHHHH-SCTTEEEEESCCCSSSSBSCTTCCCHHHH---HHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHH-hccCCEEEeeecCCccCCCcccccCHHHH---HHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHC
Confidence 36688888765 3 445555551 1555565 5679999999998 33 455555556888899
Q ss_pred CCcEEEEeCCH-H-------------HHHHHhcc---cCCcEEEeeccccccccccccccccccCchhHHHHhhcccc--
Q 015424 288 GLTALVEVHDE-R-------------EMDRVLGI---EGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERG-- 348 (407)
Q Consensus 288 GL~aLVEVht~-e-------------ElerAl~l---~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~-- 348 (407)
||.++++|-.. + +++.++.. -...+|....-=.||||..-| .+...+....+|.
T Consensus 120 GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~vIAYEPvWAIGTG~~At-------~e~aqevh~~IR~~l 192 (249)
T 3th6_A 120 GLNVIACIGELLEDREAGRTEEVCFRQIKHIASNVKDWSKVVIAYEPVWAIGTGKTAT-------PDQAQEVHSKVRNWL 192 (249)
T ss_dssp TCEEEEEECCCHHHHTTTCHHHHHHHHHHHHHTTCSCGGGEEEEECCTTTCCC---CC-------HHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhchhhhcCEEEEECCcchhcCCCCCC-------HHHHHHHHHHHHHHH
Confidence 99999999853 2 23344421 012467776655555444322 2222222222211
Q ss_pred -ccc---ccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 349 -EII---RQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 349 -~~i---~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
..+ ....+.++..|+++.-.+...+...++||+|||.+=.++
T Consensus 193 ~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~~ 238 (249)
T 3th6_A 193 STNVSADVASKVRIQYGGSVNAGNCKELGRKPDIDGFLVGGASLKP 238 (249)
T ss_dssp HHHTCHHHHHHCCEEECSCCCTTTHHHHHTSTTCCEEEECGGGGST
T ss_pred HHhhChhhcccccEEEcCccCHhHHHHHhcCCCCCEEEeehHhhhH
Confidence 000 012468899999977777777778899999999999886
No 222
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=96.13 E-value=0.003 Score=60.83 Aligned_cols=74 Identities=14% Similarity=0.079 Sum_probs=58.5
Q ss_pred CHHHHHHHHHHcCCcEEEEEe--------c---C----------CcCCC------CHHHHHHHHhcCC--CCcEEecccc
Q 015424 198 DPVEIARSYEKGGAACLSILT--------D---E----------KYFKG------SFENLEAVRSAGV--KCPLLCKEFI 248 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLT--------d---~----------~~F~G------s~edL~~Vr~a~v--~lPVL~KDFI 248 (407)
+..++|+.+++.|+++|.|-. | . ..+.| +.+.+..+++. + ++||+.-..|
T Consensus 173 ~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~-~~~~ipvi~~GGI 251 (311)
T 1jub_A 173 HFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTR-LKPEIQIIGTGGI 251 (311)
T ss_dssp HHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTT-SCTTSEEEEESSC
T ss_pred HHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHh-cCCCCCEEEECCC
Confidence 345669999999999998742 1 0 01113 26778888876 7 8999999999
Q ss_pred CCHHHHHHHHHcCCCEEEEeccCC
Q 015424 249 VDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 249 id~~QI~eAr~~GADaVLLiaaiL 272 (407)
.++.++.++..+|||+|.+..+++
T Consensus 252 ~~~~da~~~l~~GAd~V~vg~~~l 275 (311)
T 1jub_A 252 ETGQDAFEHLLCGATMLQIGTALH 275 (311)
T ss_dssp CSHHHHHHHHHHTCSEEEECHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEchHHH
Confidence 999999999999999999998887
No 223
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=96.12 E-value=0.0089 Score=55.03 Aligned_cols=84 Identities=11% Similarity=0.179 Sum_probs=66.7
Q ss_pred CHHHHHHHHHHcCCcEEEEEe-cCC-cCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHc---CCCEEEEeccC
Q 015424 198 DPVEIARSYEKGGAACLSILT-DEK-YFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK---GADAVLLIAAV 271 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLT-d~~-~F~G-s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~---GADaVLLiaai 271 (407)
++.+.++.+++.|+..|-+.+ ++. .++| +++.++.+++. +++||+.-..|.++..+.++..+ |||+|+++.++
T Consensus 150 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~-~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al 228 (244)
T 2y88_A 150 DLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADR-TDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKAL 228 (244)
T ss_dssp EHHHHHHHHHHTTCCCEEEEETTTTTTTSCCCHHHHHHHHTT-CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHH
T ss_pred CHHHHHHHHHhCCCCEEEEEecCCccccCCCCHHHHHHHHHh-CCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHH
Confidence 789999999999999998866 332 2233 67788888876 89999999999999999999988 99999999887
Q ss_pred CCHH-HHHHHHH
Q 015424 272 LPDL-DIRYMTK 282 (407)
Q Consensus 272 L~~~-~L~~Li~ 282 (407)
+... .+.++.+
T Consensus 229 ~~~~~~~~~~~~ 240 (244)
T 2y88_A 229 YARRFTLPQALA 240 (244)
T ss_dssp HTTSSCHHHHHH
T ss_pred HCCCcCHHHHHH
Confidence 7543 3444444
No 224
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=96.10 E-value=0.0057 Score=60.64 Aligned_cols=78 Identities=10% Similarity=0.119 Sum_probs=62.3
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCC--cCCC---------CHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCCCEE
Q 015424 198 DPVEIARSYEKGGAACLSILTDEK--YFKG---------SFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAV 265 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~--~F~G---------s~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~GADaV 265 (407)
+..++|+.+++.|+++|.|-.-.. .+.| .++.+..+++. + ++||+.-..|.++.++.++.. |||+|
T Consensus 145 ~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~-~~~iPVianGgI~s~eda~~~l~-GaD~V 222 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGD-FPQLTFVTNGGIRSLEEALFHLK-RVDGV 222 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHH-CTTSEEEEESSCCSHHHHHHHHT-TSSEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHh-CCCCeEEEECCcCCHHHHHHHHh-CCCEE
Confidence 578899999999999999854221 2223 57788899987 7 899999999999999999987 99999
Q ss_pred EEeccCCCHHHH
Q 015424 266 LLIAAVLPDLDI 277 (407)
Q Consensus 266 LLiaaiL~~~~L 277 (407)
.+.-.++.+.++
T Consensus 223 ~iGRa~l~~P~l 234 (350)
T 3b0p_A 223 MLGRAVYEDPFV 234 (350)
T ss_dssp EECHHHHHCGGG
T ss_pred EECHHHHhCcHH
Confidence 999888755544
No 225
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=96.09 E-value=0.0089 Score=59.56 Aligned_cols=90 Identities=23% Similarity=0.159 Sum_probs=71.5
Q ss_pred CHHHHHHHHHHcCCcEEEEEec---CC----cCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEe
Q 015424 198 DPVEIARSYEKGGAACLSILTD---EK----YFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLI 268 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd---~~----~F~G-s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLi 268 (407)
+..++|+.+++.|++.|+|-.- +. ...| ..+.++.+|+. +++||+.-..|.++.+..++...| ||.|.+.
T Consensus 247 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 247 ESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRRE-AKLPVTSAWGFGTPQLAEAALQANQLDLVSVG 325 (363)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-HTCCEEECSSTTSHHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHH-cCCcEEEeCCCCCHHHHHHHHHCCCccEEEec
Confidence 6778899999999999999741 11 0112 46778888987 899999999999999999999999 9999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCc
Q 015424 269 AAVLPDLDIRYMTKICKLLGLT 290 (407)
Q Consensus 269 aaiL~~~~L~~Li~~a~~LGL~ 290 (407)
-.++.+.+| ..+.++.+|++
T Consensus 326 R~~lanPdl--~~k~~~~lg~~ 345 (363)
T 3l5l_A 326 RAHLADPHW--AYFAAKELGVE 345 (363)
T ss_dssp HHHHHCTTH--HHHHHHHTTCT
T ss_pred HHHHhCchH--HHHHHHHcCCC
Confidence 888876666 55666778853
No 226
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=96.08 E-value=0.061 Score=64.58 Aligned_cols=174 Identities=16% Similarity=0.118 Sum_probs=103.3
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHH----HHHHHHhcCCC--CcEEeccccCCHH----H---HHHHHHcCCCE--
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFE----NLEAVRSAGVK--CPLLCKEFIVDAW----Q---IYYARTKGADA-- 264 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~e----dL~~Vr~a~v~--lPVL~KDFIid~~----Q---I~eAr~~GADa-- 264 (407)
.++|.+..++|. +-+++-..+ .+.+ .|+.+|+. ++ -|+=+.=+..+++ | +..+++.|+..
T Consensus 604 ~~lvaAvsnAGg--lg~l~~~~~--~~~e~l~~~I~~~~~~-t~~~~~~gvN~~~~~~~~~~~~~~~~~~~~~~gv~i~~ 678 (2051)
T 2uv8_G 604 PDFVAATTNAGY--TIELAGGGY--FSAAGMTAAIDSVVSQ-IEKGSTFGINLIYVNPFMLQWGIPLIKELRSKGYPIQF 678 (2051)
T ss_dssp HHHHHHHHHTTC--EEEEEGGGC--CSHHHHHHHHHHHHHH-SCTTCCEEEEEETTCTTHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCc--EEEEccCCC--CCHHHHHHHHHHHHHh-cCCCCceEEEEeecChhhhhhhHHHHHHHHHcCCCcce
Confidence 457777777774 556643222 1344 44455554 33 3543332223332 2 35578899988
Q ss_pred EEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCC----HHHHHHHhcccCCcEE---EeeccccccccccccccccccCch
Q 015424 265 VLLIAAVLPDLDIRYMTKICKLLGLTALVEVHD----EREMDRVLGIEGIELI---GINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 265 VLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht----~eElerAl~l~Ga~iI---GINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
|.+.+-.=+ ++...++.+.+|+.++.-+-+ ...+.++.++ |++.+ -+..-.--||. ...++. .
T Consensus 679 v~~~ag~p~---~~~~~~~i~~lG~~vi~~~~~~~~a~~~~~~~~~~-g~d~~ii~~~~G~eaGGH~---g~~d~~---~ 748 (2051)
T 2uv8_G 679 LTIGAGVPS---LEVASEYIETLGLKYLGLKPGSIDAISQVINIAKA-HPNFPIALQWTGGRGGGHH---SFEDAH---T 748 (2051)
T ss_dssp EEEESSCCC---HHHHHHHHHHSCCSCEEECCCSHHHHHHHHHHHHH-STTSCEEEEECCSSCSEEC---CSCCSS---H
T ss_pred EEecCCCCc---hhhHHHHHHHcCCEEEEecCchHHHHHHHHHHHHh-CCCceeEEEEEccCcCCCC---Cccccc---c
Confidence 776654333 334556777789999885553 3334666665 88863 44333331211 111111 1
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHH-----------HcCCCEEEEcccccCCCC
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQ-----------EAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~-----------~~GadaVLVGeaLmk~~d 392 (407)
.+..|++.++. ..++++|+.|||.+.+++..++ .+||+||++|+.+|-...
T Consensus 749 ~~l~l~~~v~~----~~~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~E 810 (2051)
T 2uv8_G 749 PMLQMYSKIRR----HPNIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKE 810 (2051)
T ss_dssp HHHHHHHHHTT----CTTBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTT
T ss_pred cHHHHHHHHHh----cCCceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCcc
Confidence 12234444322 1378999999999999999999 899999999999997654
No 227
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=96.06 E-value=0.04 Score=53.89 Aligned_cols=121 Identities=19% Similarity=0.222 Sum_probs=83.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEEec---------CCcCCCCHHHHHHHHhcCCCCcEEecc--ccCCHHHHHHHHHcCCCEE
Q 015424 197 FDPVEIARSYEKGGAACLSILTD---------EKYFKGSFENLEAVRSAGVKCPLLCKE--FIVDAWQIYYARTKGADAV 265 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd---------~~~F~Gs~edL~~Vr~a~v~lPVL~KD--FIid~~QI~eAr~~GADaV 265 (407)
+++..+.++.+..|+.++-+... ..-|.+..+.++.+|+ +++||+.|. +..++.....+..+|||+|
T Consensus 132 ~~~~~~~~a~~~~~~~a~~i~~n~~~~~~~~~~~~~~~~~~~i~~vr~--~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I 209 (332)
T 1vcf_A 132 YGRDDLLRLVEMLEADALAFHVNPLQEAVQRGDTDFRGLVERLAELLP--LPFPVMVKEVGHGLSREAALALRDLPLAAV 209 (332)
T ss_dssp CCHHHHHHHHHHHTCSEEEEECCHHHHHHTTSCCCCTTHHHHHHHHCS--CSSCEEEECSSSCCCHHHHHHHTTSCCSEE
T ss_pred cChHHHHHHHhhcCCCceeeccchHHHHhcCCCccHHHHHHHHHHHHc--CCCCEEEEecCCCCCHHHHHHHHHcCCCEE
Confidence 56777777777667776543211 1123344688888886 589999996 2277888888889999999
Q ss_pred EEecc------------C---------C--CHHHHHHHHHHHHHc-CCcEEE--EeCCHHHHHHHhcccCCcEEEeeccc
Q 015424 266 LLIAA------------V---------L--PDLDIRYMTKICKLL-GLTALV--EVHDEREMDRVLGIEGIELIGINNRN 319 (407)
Q Consensus 266 LLiaa------------i---------L--~~~~L~~Li~~a~~L-GL~aLV--EVht~eElerAl~l~Ga~iIGINnRd 319 (407)
.+.-. . + ....+..+.+..+.+ ++.++. -+++.+++.+++.+ ||+.|++-..-
T Consensus 210 ~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~~-GAd~V~igr~~ 288 (332)
T 1vcf_A 210 DVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKALAL-GADLLAVARPL 288 (332)
T ss_dssp ECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHHHHHHH-TCSEEEECGGG
T ss_pred EeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHh-CCChHhhhHHH
Confidence 88432 1 2 112344455555556 677777 57899999999998 99999996544
Q ss_pred c
Q 015424 320 L 320 (407)
Q Consensus 320 L 320 (407)
|
T Consensus 289 l 289 (332)
T 1vcf_A 289 L 289 (332)
T ss_dssp H
T ss_pred H
Confidence 3
No 228
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=96.06 E-value=0.02 Score=55.57 Aligned_cols=194 Identities=11% Similarity=0.013 Sum_probs=112.5
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhc-----CCCCcEEecc----
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA-----GVKCPLLCKE---- 246 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a-----~v~lPVL~KD---- 246 (407)
++-|++..|=. .+ .....++++.+...-...+-|+.-| .+-+|..+++. +.++.|=..|
T Consensus 25 k~~i~gNWKmn-~t------~~~~~~l~~~l~~~~~~~vevvv~P-----p~~~L~~v~~~~~~~~~~~i~vgAQn~~~~ 92 (271)
T 3krs_A 25 KYFVGGNFKCN-GT------KESLKTLIDSFKQVESSNSEVYVFP-----TSLHISLVKEFFGNDHPGVFKIGSQNISCT 92 (271)
T ss_dssp CCEEEEECCBC-CC------HHHHHHHHHHHTTCCCCSSEEEEEC-----CGGGHHHHHHHHCSSSCSCEEECBSCCCSS
T ss_pred CeEEEEEhhhC-cC------HHHHHHHHHHHHhcccCCceEEEEC-----cHHHHHHHHHHHhhccCCCceEEecccccc
Confidence 45677777754 11 1134455555543211112333334 46688888754 1234444444
Q ss_pred ----c--cCCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCC-HHH-------------
Q 015424 247 ----F--IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHD-ERE------------- 300 (407)
Q Consensus 247 ----F--Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht-~eE------------- 300 (407)
| =+.+.++ +++||+.|+|+.+ .+ +++.+..=++.|.+.||.++++|-. ++|
T Consensus 93 ~~GAfTGEIS~~mL---kd~G~~~ViiGHSERR~~f~Etde~v~~Kv~~Al~~GL~pIlCVGEtleere~g~t~~vv~~Q 169 (271)
T 3krs_A 93 GNGAFTGEVSCEML---KDMDVDCSLVGHSERRQYYSETDQIVNNKVKKGLENGLKIVLCIGESLSERETGKTNDVIQKQ 169 (271)
T ss_dssp CSBSCTTCCCHHHH---HHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHH
T ss_pred cCCCccccccHHHH---HHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHCCCHHHHHHHH
Confidence 1 1555555 5679999999998 33 4555666678888999999999974 442
Q ss_pred HHHHhcc---cCCcEEEeeccccccccccccccccccCchhHHHHhhccccc---cc---ccCCceEEEeeCCCCHHHHH
Q 015424 301 MDRVLGI---EGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGE---II---RQKNIIVVGESGLFTPDDIA 371 (407)
Q Consensus 301 lerAl~l---~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~---~i---~~~~v~vVAESGI~t~eD~~ 371 (407)
++.++.. -...+|....-=.||||..-++ +...+....+|.- .+ ..+.+.++..|+++.-....
T Consensus 170 l~~~l~~v~~~~~~vIAYEPvWAIGTG~tAtp-------e~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~~e 242 (271)
T 3krs_A 170 LTEALKDVSDLSNLVIAYEPIWAIGTGVVATP-------GQAQEAHAFIREYVTRMYNPQVSSNLRIIYGGSVTPDNCNE 242 (271)
T ss_dssp HHHHTTTCCCCTTEEEEECCGGGSSSSCCCCH-------HHHHHHHHHHHHHHHHHSCHHHHHHCCEEECSCCCTTTHHH
T ss_pred HHHHHhchHhhcCEEEEECChhhhcCCCCCCH-------HHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHH
Confidence 2333320 0234777766655565543222 2222222211110 00 01246788999997766667
Q ss_pred HHHHcCCCEEEEcccccCCCC
Q 015424 372 YVQEAGVKAVLVGESIVKQDD 392 (407)
Q Consensus 372 ~l~~~GadaVLVGeaLmk~~d 392 (407)
.+...++||+|||.+-++ ++
T Consensus 243 l~~~~diDG~LVGgASL~-~~ 262 (271)
T 3krs_A 243 LIKCADIDGFLVGGASLK-PT 262 (271)
T ss_dssp HHHSTTCCEEEESGGGGS-TT
T ss_pred HhcCCCCCEEEeeHHhhh-HH
Confidence 777889999999999999 45
No 229
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=96.05 E-value=0.091 Score=51.75 Aligned_cols=44 Identities=20% Similarity=0.289 Sum_probs=37.7
Q ss_pred CCceEEEeeCCCCHHHHHHHHHcCCCEEEEccccc-CCCChHHHH
Q 015424 354 KNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIV-KQDDPGKGI 397 (407)
Q Consensus 354 ~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLm-k~~dp~~~i 397 (407)
.++++|+-|||.|.+|+.+...+||++|-||++++ +++.....+
T Consensus 276 ~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~GP~~~~~I 320 (354)
T 3tjx_A 276 PGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERL 320 (354)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHH
T ss_pred CCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhcCchHHHHH
Confidence 35789999999999999999999999999999964 677765444
No 230
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=96.03 E-value=0.061 Score=54.31 Aligned_cols=93 Identities=15% Similarity=0.263 Sum_probs=68.9
Q ss_pred CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEecc---CC--CHHHHHHHHHHHHHc--CCcEEEE--e
Q 015424 225 GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---VL--PDLDIRYMTKICKLL--GLTALVE--V 295 (407)
Q Consensus 225 Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa---iL--~~~~L~~Li~~a~~L--GL~aLVE--V 295 (407)
.+.++++.+|+. +++||+.|.. .++.....+.++|||+|.+.-. .+ ....+..+.+..+.+ .+.+++. +
T Consensus 239 ~~~~~i~~lr~~-~~~PvivKgv-~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI 316 (392)
T 2nzl_A 239 ISWEDIKWLRRL-TSLPIVAKGI-LRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGV 316 (392)
T ss_dssp CCHHHHHHHC---CCSCEEEEEE-CCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSC
T ss_pred HHHHHHHHHHHh-hCCCEEEEec-CCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCC
Confidence 368889999986 8999999964 7788888899999999999432 12 223455565655555 4777764 6
Q ss_pred CCHHHHHHHhcccCCcEEEeecccc
Q 015424 296 HDEREMDRVLGIEGIELIGINNRNL 320 (407)
Q Consensus 296 ht~eElerAl~l~Ga~iIGINnRdL 320 (407)
++.+++.+++.+ ||+.|+|-..-+
T Consensus 317 ~~g~Dv~kalal-GAd~V~iGr~~l 340 (392)
T 2nzl_A 317 RKGTDVLKALAL-GAKAVFVGRPIV 340 (392)
T ss_dssp CSHHHHHHHHHT-TCSEEEECHHHH
T ss_pred CCHHHHHHHHHh-CCCeeEECHHHH
Confidence 799999999998 999999965433
No 231
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=95.98 E-value=0.019 Score=57.66 Aligned_cols=74 Identities=19% Similarity=0.175 Sum_probs=60.5
Q ss_pred CHHHHHHHHHHcCCcEEEEE-ecC-----------CcCCC---------CHHHHHHHHhcCC--CCcEEeccccCCHHHH
Q 015424 198 DPVEIARSYEKGGAACLSIL-TDE-----------KYFKG---------SFENLEAVRSAGV--KCPLLCKEFIVDAWQI 254 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVL-Td~-----------~~F~G---------s~edL~~Vr~a~v--~lPVL~KDFIid~~QI 254 (407)
+..++|+..+++||++|.|- |-. ..++| +++.+..+++. + ++||+.-..|.+..++
T Consensus 235 ~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~-v~~~ipvI~~GGI~s~~da 313 (367)
T 3zwt_A 235 DKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYAL-TQGRVPIIGVGGVSSGQDA 313 (367)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHH-TTTCSCEEEESSCCSHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHH-cCCCceEEEECCCCCHHHH
Confidence 57789999999999999975 210 02233 35788888887 7 8999999999999999
Q ss_pred HHHHHcCCCEEEEeccCC
Q 015424 255 YYARTKGADAVLLIAAVL 272 (407)
Q Consensus 255 ~eAr~~GADaVLLiaaiL 272 (407)
.++..+|||+|.+..+++
T Consensus 314 ~~~l~~GAd~V~vgra~l 331 (367)
T 3zwt_A 314 LEKIRAGASLVQLYTALT 331 (367)
T ss_dssp HHHHHHTCSEEEESHHHH
T ss_pred HHHHHcCCCEEEECHHHH
Confidence 999999999999988875
No 232
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=95.94 E-value=0.15 Score=51.51 Aligned_cols=169 Identities=16% Similarity=0.124 Sum_probs=110.3
Q ss_pred CHHHHHHHHHHcCCcEEEEEe-----cCCcCCC-CHHHH---HHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEe
Q 015424 198 DPVEIARSYEKGGAACLSILT-----DEKYFKG-SFENL---EAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLI 268 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLT-----d~~~F~G-s~edL---~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLi 268 (407)
-..++|+.+.+.||.+|-.-+ -+..|+| +.+.+ ..+++. ..+|+++- +.|+.++..+..+ +|.+-+.
T Consensus 157 ~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~-~Gl~~~te--~~d~~~~~~l~~~-vd~lkIg 232 (385)
T 3nvt_A 157 QVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDE-YGLGVISE--IVTPADIEVALDY-VDVIQIG 232 (385)
T ss_dssp HHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH-HTCEEEEE--CCSGGGHHHHTTT-CSEEEEC
T ss_pred HHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHH-cCCEEEEe--cCCHHHHHHHHhh-CCEEEEC
Confidence 356788889999999986654 2334666 33444 444444 68999973 3778888888777 9999998
Q ss_pred ccCCCHHHHHHHHHHHHHcCCcEEEEe---CCHHHHHHHhcc---cCCcEEEeeccccccccccccc-cccccCchhHHH
Q 015424 269 AAVLPDLDIRYMTKICKLLGLTALVEV---HDEREMDRVLGI---EGIELIGINNRNLAISIFSYRT-ETFEVDNSNTKK 341 (407)
Q Consensus 269 aaiL~~~~L~~Li~~a~~LGL~aLVEV---ht~eElerAl~l---~Ga~iIGINnRdL~~~~~~~t~-~Tf~vDl~~t~~ 341 (407)
+.-+.+. .|++.+.++|..+++.. .|.+|+..|++. .|..-|.+-.|.- ..|++ ....+|+.....
T Consensus 233 s~~~~n~---~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~----s~yp~~~~~~ldl~~i~~ 305 (385)
T 3nvt_A 233 ARNMQNF---ELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGI----RTYEKATRNTLDISAVPI 305 (385)
T ss_dssp GGGTTCH---HHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCB----CCSCCSSSSBCCTTHHHH
T ss_pred cccccCH---HHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCC----CCCCCCCccccCHHHHHH
Confidence 8888764 35666778999999998 678888777543 3555555555532 23333 224478877666
Q ss_pred HhhcccccccccCCceEEEe----eCCCC--HHHHHHHHHcCCCEEEEcc
Q 015424 342 LLEGERGEIIRQKNIIVVGE----SGLFT--PDDIAYVQEAGVKAVLVGE 385 (407)
Q Consensus 342 L~~~~~~~~i~~~~v~vVAE----SGI~t--~eD~~~l~~~GadaVLVGe 385 (407)
|.+. .+++|++= +|-.. +.-......+||+|++|-.
T Consensus 306 lk~~--------~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~ 347 (385)
T 3nvt_A 306 LKKE--------THLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEV 347 (385)
T ss_dssp HHHH--------BSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEB
T ss_pred HHHh--------cCCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEe
Confidence 6543 24455443 12111 1224456789999999987
No 233
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=95.93 E-value=0.018 Score=60.49 Aligned_cols=92 Identities=23% Similarity=0.153 Sum_probs=74.2
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecC---CcCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHH-cCCCEEEEeccC
Q 015424 197 FDPVEIARSYEKGGAACLSILTDE---KYFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYART-KGADAVLLIAAV 271 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~---~~F~G-s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~-~GADaVLLiaai 271 (407)
.++.+.|+.+++.||..|- +|+- +.++| +++.++.+++. +++||+.-..|-++.++.++.. .|||+|++..++
T Consensus 452 ~~~~e~a~~~~~~Ga~~il-~t~~~~dG~~~G~d~~li~~l~~~-~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~ 529 (555)
T 1jvn_A 452 LGVWELTRACEALGAGEIL-LNCIDKDGSNSGYDLELIEHVKDA-VKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMF 529 (555)
T ss_dssp EEHHHHHHHHHHTTCCEEE-ECCGGGTTTCSCCCHHHHHHHHHH-CSSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHH
T ss_pred CCHHHHHHHHHHcCCCEEE-EeCCCCCCCCCCCCHHHHHHHHHh-CCccEEEECCCCCHHHHHHHHHhcCChHHHHHHHH
Confidence 5789999999999999995 4542 33344 67888888887 8999999999999999999987 899999998776
Q ss_pred CCH-HHHHHHHHHHHHcCCc
Q 015424 272 LPD-LDIRYMTKICKLLGLT 290 (407)
Q Consensus 272 L~~-~~L~~Li~~a~~LGL~ 290 (407)
+.. -.+.++.+++++-|+.
T Consensus 530 ~~~~~~~~e~~~~l~~~gi~ 549 (555)
T 1jvn_A 530 HRGEFTVNDVKEYLLEHGLK 549 (555)
T ss_dssp HTTSCCHHHHHHHHHHTTCC
T ss_pred HcCCCCHHHHHHHHHHCCCc
Confidence 644 3577777777777774
No 234
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=95.92 E-value=0.05 Score=54.00 Aligned_cols=131 Identities=14% Similarity=0.049 Sum_probs=80.9
Q ss_pred HHHHcCCCEEEEecc-------CC-------CH----------HHHHHHHHHHHH-cC--CcEEEEeC---------CHH
Q 015424 256 YARTKGADAVLLIAA-------VL-------PD----------LDIRYMTKICKL-LG--LTALVEVH---------DER 299 (407)
Q Consensus 256 eAr~~GADaVLLiaa-------iL-------~~----------~~L~~Li~~a~~-LG--L~aLVEVh---------t~e 299 (407)
.|.++|.|+|=|.++ +| +| .-+.++++.+++ .| +.+.|-++ +.+
T Consensus 151 ~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~ 230 (343)
T 3kru_A 151 RANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINID 230 (343)
T ss_dssp HHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHH
T ss_pred hccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHH
Confidence 367789999999854 22 11 123445555554 44 44666444 234
Q ss_pred H---HHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHc
Q 015424 300 E---MDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA 376 (407)
Q Consensus 300 E---lerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~ 376 (407)
| +-+.++-. +++|-+....... . .. ...-..+++...++.+. -++++|+-|||++++++.++.+.
T Consensus 231 ~~~~~a~~l~~~-vd~i~vs~g~~~~-~-~~-~~~~~~~~~~~~~ir~~--------~~iPVi~~Ggi~t~e~Ae~~l~~ 298 (343)
T 3kru_A 231 MMVEYINMIKDK-VDLIDVSSGGLLN-V-DI-NLYPGYQVKYAETIKKR--------CNIKTSAVGLITTQELAEEILSN 298 (343)
T ss_dssp HHHHHHHHHTTT-CSEEEEECCCSSC-C-CC-CCCTTTTHHHHHHHHHH--------HTCEEEEESSCCCHHHHHHHHHT
T ss_pred HHHHHHHHhhcc-ccEEeccCCceEe-e-ee-cccCceeehHHHHHHHh--------cCcccceeeeeeHHHHHHHHHhc
Confidence 4 33334433 7788774322200 0 00 00011244444455443 25799999999999999999999
Q ss_pred C-CCEEEEcccccCCCChHHHHH
Q 015424 377 G-VKAVLVGESIVKQDDPGKGIT 398 (407)
Q Consensus 377 G-adaVLVGeaLmk~~dp~~~i~ 398 (407)
| ||.|.+|.+++..+|...+++
T Consensus 299 G~aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 299 ERADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp TSCSEEEESHHHHHCTTHHHHTC
T ss_pred hhhHHHHHHHHHhcCCeEEEEEe
Confidence 8 999999999999999887776
No 235
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=95.85 E-value=0.02 Score=54.53 Aligned_cols=69 Identities=28% Similarity=0.250 Sum_probs=54.5
Q ss_pred HHHHHHHHcCCcEEEEEecCCcCC-----CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCC
Q 015424 201 EIARSYEKGGAACLSILTDEKYFK-----GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVLTd~~~F~-----Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (407)
+.++...+.|+..| +- -...++ .+++.|+.+++. +++||+....|-++.++.++..+|||+|+++.++.
T Consensus 138 ~~a~~~~~~gad~v-~~-~~~~~Gt~~~~~~~~~l~~i~~~-~~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~ 211 (264)
T 1xm3_A 138 VLARKLEELGVHAI-MP-GASPIGSGQGILNPLNLSFIIEQ-AKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVS 211 (264)
T ss_dssp HHHHHHHHHTCSCB-EE-CSSSTTCCCCCSCHHHHHHHHHH-CSSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHhCCCEE-EE-CCcccCCCCCCCCHHHHHHHHhc-CCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHh
Confidence 35677778899888 32 111111 147899999986 89999999888899999999999999999999877
No 236
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=95.81 E-value=0.0066 Score=62.14 Aligned_cols=74 Identities=15% Similarity=0.127 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHcCCcEEEEEe-c------------CCcCCC------CHHHHHHHHhcCC--CCcEEeccccCCHHHHHH
Q 015424 198 DPVEIARSYEKGGAACLSILT-D------------EKYFKG------SFENLEAVRSAGV--KCPLLCKEFIVDAWQIYY 256 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLT-d------------~~~F~G------s~edL~~Vr~a~v--~lPVL~KDFIid~~QI~e 256 (407)
+..++|+.++++||++|.+-. - ...+.| +++.+..+++. + ++||+.-..|.+..++.+
T Consensus 284 ~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~-v~~~iPIIg~GGI~s~eDa~e 362 (415)
T 3i65_A 284 QKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNY-TNKQIPIIASGGIFSGLDALE 362 (415)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHH-TTTCSCEEECSSCCSHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHH-hCCCCCEEEECCCCCHHHHHH
Confidence 478999999999999998752 1 111223 24678888876 6 799999999999999999
Q ss_pred HHHcCCCEEEEeccCC
Q 015424 257 ARTKGADAVLLIAAVL 272 (407)
Q Consensus 257 Ar~~GADaVLLiaaiL 272 (407)
+..+|||+|.+..+++
T Consensus 363 ~l~aGAd~VqIgra~l 378 (415)
T 3i65_A 363 KIEAGASVCQLYSCLV 378 (415)
T ss_dssp HHHHTEEEEEESHHHH
T ss_pred HHHcCCCEEEEcHHHH
Confidence 9999999999988876
No 237
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=95.81 E-value=0.0034 Score=58.30 Aligned_cols=167 Identities=11% Similarity=0.104 Sum_probs=92.5
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE--e--ccccCCHH-HHHHHHHcCCCEEEEeccCC
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--C--KEFIVDAW-QIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL--~--KDFIid~~-QI~eAr~~GADaVLLiaaiL 272 (407)
...++++.... ..|+=|-++= |. .+++-++.+|+. +.+|+ + -|..-+.. .+..+..+|||+|-+-+. .
T Consensus 23 ~a~~i~~~~~~--~~~~Kvg~~l-~~-~G~~~v~~l~~~--~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~vTvh~~-~ 95 (213)
T 1vqt_A 23 DPIRFIDENGS--FEVVKVGHNL-AI-HGKKIFDELAKR--NLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHSC-A 95 (213)
T ss_dssp SHHHHHHHHCC--CSEEEECHHH-HT-TCTHHHHHHHTT--TCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEGG-G
T ss_pred HHHHHHHHhCC--CCEEEECHHH-Hh-hCHHHHHHHHHC--CCCEEEEeecccCchHHHHHHHHHHHCCCCEEEEecc-C
Confidence 45556665532 2455554432 33 556778888874 56776 2 45433333 355677899999998664 3
Q ss_pred CHHHHHHHHHHHH--HcCCcEEEEeCCH--HHHHHH---hcccCCcEEEeeccccccccccccccccccCchhHHHHhhc
Q 015424 273 PDLDIRYMTKICK--LLGLTALVEVHDE--REMDRV---LGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEG 345 (407)
Q Consensus 273 ~~~~L~~Li~~a~--~LGL~aLVEVht~--eElerA---l~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~ 345 (407)
..+.++.+.+.++ .+++.+|...... +.+... .++ |+++|.. .+....+.+.
T Consensus 96 G~~~l~~~~~~~~~~~~~V~~lts~~~~l~~~v~~~a~~~e~-G~dvV~~--------------------~~~~~~ir~~ 154 (213)
T 1vqt_A 96 GYESVERALSATDKHVFVVVKLTSMEGSLEDYMDRIEKLNKL-GCDFVLP--------------------GPWAKALREK 154 (213)
T ss_dssp CHHHHHHHHHHCSSEEEEECCCTTSCCCHHHHHHHHHHHHHH-TCEEECC--------------------HHHHHHHTTT
T ss_pred CHHHHHHHHHhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhcC-CCEEEEc--------------------HHHHHHHHHH
Confidence 4445666666543 1122222122111 211111 333 5553221 1223344332
Q ss_pred ccccccccCCceEEEeeCCCCH---HH------HHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 346 ERGEIIRQKNIIVVGESGLFTP---DD------IAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 346 ~~~~~i~~~~v~vVAESGI~t~---eD------~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
.+.. +.-+||.-. .| +.. .++|+|.++||.+|++++||.++++++..
T Consensus 155 ------~~~~---~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVvGR~I~~a~dP~~aa~~i~~ 210 (213)
T 1vqt_A 155 ------IKGK---ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVLGREIYLSENPREKIKRIKE 210 (213)
T ss_dssp ------CCSC---EEECCBC---------CCBCHHH-HTTTCSEEEESHHHHTSSCHHHHHHHHTC
T ss_pred ------CCCC---EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEEChhhcCCCCHHHHHHHHHH
Confidence 1232 445677432 22 566 79999999999999999999999998864
No 238
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=95.80 E-value=0.039 Score=52.15 Aligned_cols=80 Identities=18% Similarity=0.097 Sum_probs=56.8
Q ss_pred HHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHH-HHH
Q 015424 201 EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL-DIR 278 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~-~L~ 278 (407)
.+|.+.+-.|-..+=.-. .+ -.|+++.++.+|+. + ++||.....|.++.|+.++. .|||+|.++.++..+. .+.
T Consensus 144 ~~a~~a~~~g~~~VYld~-sG-~~~~~~~i~~i~~~-~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~p~~~~ 219 (228)
T 3vzx_A 144 AYARVSELLQLPIFYLEY-SG-VLGDIEAVKKTKAV-LETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYEDFDRAL 219 (228)
T ss_dssp HHHHHHHHTTCSEEEEEC-TT-SCCCHHHHHHHHHH-CSSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHCHHHHH
T ss_pred HHHHHHHHcCCCEEEecC-CC-CcCCHHHHHHHHHh-cCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcCHHHHH
Confidence 333433444444443222 22 24689999999987 7 79999999999999999987 7999999999988543 455
Q ss_pred HHHHHH
Q 015424 279 YMTKIC 284 (407)
Q Consensus 279 ~Li~~a 284 (407)
++++..
T Consensus 220 ~~v~a~ 225 (228)
T 3vzx_A 220 KTVAAV 225 (228)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
No 239
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=95.76 E-value=0.077 Score=48.29 Aligned_cols=105 Identities=10% Similarity=0.126 Sum_probs=71.4
Q ss_pred HHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCC---cEEEEeCCHHHHHHHhcccCCcEEEeecccccccccccc
Q 015424 252 WQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGL---TALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYR 328 (407)
Q Consensus 252 ~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL---~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t 328 (407)
.++.++...|+|.|.+...-++..++.++++..+.++. ..++. +.++.+.++ |++.|-+...++
T Consensus 33 ~~~~~~~~~G~~~v~lr~~~~~~~~~~~~~~~l~~~~~~~~~l~v~----~~~~~a~~~-gad~v~l~~~~~-------- 99 (221)
T 1yad_A 33 ARIIITIQNEVDFIHIRERSKSAADILKLLDLIFEGGIDKRKLVMN----GRVDIALFS-TIHRVQLPSGSF-------- 99 (221)
T ss_dssp HHHHHHHGGGCSEEEECCTTSCHHHHHHHHHHHHHTTCCGGGEEEE----SCHHHHHTT-TCCEEEECTTSC--------
T ss_pred HHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHhcCcCCeEEEe----ChHHHHHHc-CCCEEEeCCCcc--------
Confidence 45667788999999887767787777788887776544 35655 345677886 999887753322
Q ss_pred ccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccc
Q 015424 329 TETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 387 (407)
Q Consensus 329 ~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 387 (407)
..+...++. + +..+.. .++|++++..+...|+|.+++|..+
T Consensus 100 ------~~~~~~~~~---------~-~~~ig~--sv~t~~~~~~a~~~gaD~i~~~~~f 140 (221)
T 1yad_A 100 ------SPKQIRARF---------P-HLHIGR--SVHSLEEAVQAEKEDADYVLFGHVF 140 (221)
T ss_dssp ------CHHHHHHHC---------T-TCEEEE--EECSHHHHHHHHHTTCSEEEEECCC
T ss_pred ------CHHHHHHHC---------C-CCEEEE--EcCCHHHHHHHHhCCCCEEEECCcc
Confidence 122222221 2 333322 4689999999999999999998743
No 240
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=95.75 E-value=0.21 Score=47.80 Aligned_cols=186 Identities=14% Similarity=0.072 Sum_probs=116.9
Q ss_pred ceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecC-----CcCCC-CHHHHHHH---HhcCCCCcEEeccc
Q 015424 177 PALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDE-----KYFKG-SFENLEAV---RSAGVKCPLLCKEF 247 (407)
Q Consensus 177 ~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~-----~~F~G-s~edL~~V---r~a~v~lPVL~KDF 247 (407)
+.||||. -+-| +..-..++|+...+.||.++..-+-. .-|+| ..+.++.+ ++. ..+|+++-
T Consensus 24 ~~vIAgp----c~~~---~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~-~Gl~~~te-- 93 (262)
T 1zco_A 24 FTIIAGP----CSIE---SREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADE-YGLVTVTE-- 93 (262)
T ss_dssp CEEEEEC----SBCC---CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH-HTCEEEEE--
T ss_pred cEEEEeC----CCCC---CHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHH-cCCcEEEe--
Confidence 7899987 2323 23356677888899999998876532 13344 24444444 444 57999873
Q ss_pred cCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHhcc---cCCcEEEeeccccc
Q 015424 248 IVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLGI---EGIELIGINNRNLA 321 (407)
Q Consensus 248 Iid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~eElerAl~l---~Ga~iIGINnRdL~ 321 (407)
+.|+.++..+..+ +|.+-+.+.-+.+.+| ++.+-++|+.+++... |.+|+..|++. .|..-+-+-.|+.
T Consensus 94 ~~d~~~~~~l~~~-vd~~kIga~~~~n~~l---l~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~- 168 (262)
T 1zco_A 94 VMDTRHVELVAKY-SDILQIGARNSQNFEL---LKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGI- 168 (262)
T ss_dssp CCCGGGHHHHHHH-CSEEEECGGGTTCHHH---HHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCB-
T ss_pred eCCHHhHHHHHhh-CCEEEECcccccCHHH---HHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCC-
Confidence 3678888888778 9999999988877543 3444458999998875 68998887732 3555555555543
Q ss_pred cccccccccccccCchhHHHHhhcccccccccCCceEEE-ee---CCCC--HHHHHHHHHcCCCEEEEcccc
Q 015424 322 ISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVG-ES---GLFT--PDDIAYVQEAGVKAVLVGESI 387 (407)
Q Consensus 322 ~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVA-ES---GI~t--~eD~~~l~~~GadaVLVGeaL 387 (407)
.+..+| ....+|+.....|.+. .++++|. .+ |.+. +.-+.....+|++|++|-+-+
T Consensus 169 ~~~~~y--~~~~v~L~ai~~lk~~--------~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 169 RTFETA--TRFTLDISAVPVVKEL--------SHLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHP 230 (262)
T ss_dssp CCSCCS--SSSBCCTTHHHHHHHH--------BSSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CCCCCc--ChhhcCHHHHHHHHhh--------hCCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 111234 3345787776666543 1334422 22 2221 122455668999999998875
No 241
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=95.75 E-value=0.016 Score=54.00 Aligned_cols=65 Identities=15% Similarity=0.159 Sum_probs=54.7
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCC--CHHHHHHHHhcCC--CCcEEeccccCCHHHHHHHHHcCCCEE
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKG--SFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADAV 265 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~G--s~edL~~Vr~a~v--~lPVL~KDFIid~~QI~eAr~~GADaV 265 (407)
+..++|+..+++||+.|.+.| +|+.| +++++..+++. + ++||+.-..|.++.++.+...+|||.|
T Consensus 133 ~~~~~a~~a~eaGad~I~tst--g~~~gga~~~~i~~v~~~-v~~~ipVia~GGI~t~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 133 EIKKAVEICIEAGADFIKTST--GFAPRGTTLEEVRLIKSS-AKGRIKVKASGGIRDLETAISMIEAGADRI 201 (225)
T ss_dssp HHHHHHHHHHHHTCSEEECCC--SCSSSCCCHHHHHHHHHH-HTTSSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHhCCCEEEECC--CCCCCCCCHHHHHHHHHH-hCCCCcEEEECCCCCHHHHHHHHHhCchHH
Confidence 467889999999999996555 55444 78999999875 5 799999999999999999999999964
No 242
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=95.74 E-value=0.02 Score=55.74 Aligned_cols=172 Identities=17% Similarity=0.093 Sum_probs=91.4
Q ss_pred CHHHHHHHHHHc--CCcEEEEEecCCcCCCCHHHHHHHHhc----CC--CCcEEe-ccc----cCCH---HHHHHHHHcC
Q 015424 198 DPVEIARSYEKG--GAACLSILTDEKYFKGSFENLEAVRSA----GV--KCPLLC-KEF----IVDA---WQIYYARTKG 261 (407)
Q Consensus 198 dp~~iA~ay~~~--GA~aISVLTd~~~F~Gs~edL~~Vr~a----~v--~lPVL~-KDF----Iid~---~QI~eAr~~G 261 (407)
++.++++...+. |..++-|. +..+..+++. ++ .+.|-. =+| -... .++.+|.+.|
T Consensus 49 dI~~lc~eA~~~~~~~aaVCV~---------p~~V~~a~~~L~~~gs~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~G 119 (281)
T 2a4a_A 49 DIRELCNESVKTCPFAAAVCVY---------PKFVKFINEKIKQEINPFKPKIACVINFPYGTDSMEKVLNDTEKALDDG 119 (281)
T ss_dssp HHHHHHHHHHSSSSCCSEEEEC---------GGGHHHHHHHHHHHSSSCCSEEEEEESTTTCCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCccEEEEC---------HHHHHHHHHHhhccCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcC
Confidence 555666666677 88777763 4455555431 23 344322 122 1111 4677889999
Q ss_pred CCEEEEeccC--CCHHHHH---HHHHH---HHH-c-C--CcEEEEeCCH--HH-H----HHHhcccCCcEEEeecccccc
Q 015424 262 ADAVLLIAAV--LPDLDIR---YMTKI---CKL-L-G--LTALVEVHDE--RE-M----DRVLGIEGIELIGINNRNLAI 322 (407)
Q Consensus 262 ADaVLLiaai--L~~~~L~---~Li~~---a~~-L-G--L~aLVEVht~--eE-l----erAl~l~Ga~iIGINnRdL~~ 322 (407)
||.|-+..-+ +...+.. ++.+. .++ . + +.+++|..-+ +| + +.+.++ |||+|=..
T Consensus 120 AdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L~d~e~i~~A~~ia~ea-GADfVKTS------ 192 (281)
T 2a4a_A 120 ADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGELKTEDLIIKTTLAVLNG-NADFIKTS------ 192 (281)
T ss_dssp CSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHHCSHHHHHHHHHHHHTT-TCSEEECC------
T ss_pred CCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHHHHHHHh-CCCEEEeC------
Confidence 9999665432 2111222 22222 222 2 3 3447777622 33 2 334555 99887763
Q ss_pred ccccccccccccCchhHHHHhhccc-ccccccCCceEEEeeCCCCHHHHHHHHHcCCC----------EEEEccc
Q 015424 323 SIFSYRTETFEVDNSNTKKLLEGER-GEIIRQKNIIVVGESGLFTPDDIAYVQEAGVK----------AVLVGES 386 (407)
Q Consensus 323 ~~~~~t~~Tf~vDl~~t~~L~~~~~-~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gad----------aVLVGea 386 (407)
|||+....|++ |.....+.++... +.......+.+-+.|||+|.+|+..+.++|++ .+-+|.+
T Consensus 193 TGf~~~gAT~e-dv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~~lG~~w~~~~~~RiGtS 266 (281)
T 2a4a_A 193 TGKVQINATPS-SVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARRFLSSLACHPDNFRIGSS 266 (281)
T ss_dssp CSCSSCCCCHH-HHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHHHTC------CCEEEEES
T ss_pred CCCCCCCCCHH-HHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhhhhccccccccCceEEecC
Confidence 22322222221 3333333332100 00000245789999999999999999999875 5677875
No 243
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.74 E-value=0.05 Score=57.67 Aligned_cols=47 Identities=9% Similarity=0.061 Sum_probs=42.8
Q ss_pred CceEEEeeCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHhhh
Q 015424 355 NIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITGLF 401 (407)
Q Consensus 355 ~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~L~ 401 (407)
++++++-|||++++++.++.+.| +|+|-+|.+++..+|+..++++=.
T Consensus 280 ~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g~ 327 (671)
T 1ps9_A 280 SLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGR 327 (671)
T ss_dssp SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHTTC
T ss_pred CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHHcCC
Confidence 57899999999999999999998 999999999999999988877543
No 244
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=95.67 E-value=0.022 Score=56.05 Aligned_cols=88 Identities=18% Similarity=0.190 Sum_probs=68.0
Q ss_pred CHHHHHHHHHHcCCcEEEEEecC---C---cCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEec
Q 015424 198 DPVEIARSYEKGGAACLSILTDE---K---YFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIA 269 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~---~---~F~G-s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLia 269 (407)
+..++|+.+++.|++.|+|..-. . ...+ ..+.+..+|+. +++||+.-..|.++.++.++...| ||.|.+.-
T Consensus 230 ~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR 308 (338)
T 1z41_A 230 DHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQ-ADMATGAVGMITDGSMAEEILQNGRADLIFIGR 308 (338)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-HCCEEEECSSCCSHHHHHHHHHTTSCSEEEECH
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHH-CCCCEEEECCCCCHHHHHHHHHcCCceEEeecH
Confidence 57789999999999999996421 1 1122 46778889987 899999999999999999999998 99999998
Q ss_pred cCCCHHHHHHHHHHHHHcC
Q 015424 270 AVLPDLDIRYMTKICKLLG 288 (407)
Q Consensus 270 aiL~~~~L~~Li~~a~~LG 288 (407)
.++.+.+| ..+..+.++
T Consensus 309 ~~i~nPdl--~~ki~~~~~ 325 (338)
T 1z41_A 309 ELLRDPFF--ARTAAKQLN 325 (338)
T ss_dssp HHHHCTTH--HHHHHHHTT
T ss_pred HHHhCchH--HHHHHcCCC
Confidence 88866665 334344443
No 245
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=95.66 E-value=0.046 Score=51.19 Aligned_cols=75 Identities=16% Similarity=0.077 Sum_probs=59.4
Q ss_pred HHHHHHHHHcCCcEEEEE----ecC-CcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCH
Q 015424 200 VEIARSYEKGGAACLSIL----TDE-KYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVL----Td~-~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~ 274 (407)
.+.|+.+++.||+.|.+. |.. +-+.-+++.++.+++. ++||+.-..|-++.++.++..+|||+|+++.++..+
T Consensus 139 ~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~p 216 (229)
T 3q58_A 139 VNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA--GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRI 216 (229)
T ss_dssp HHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT--TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHCH
T ss_pred HHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcCh
Confidence 456788889999999642 221 1245577888888874 899999999999999999999999999999887765
Q ss_pred HH
Q 015424 275 LD 276 (407)
Q Consensus 275 ~~ 276 (407)
.+
T Consensus 217 ~~ 218 (229)
T 3q58_A 217 EH 218 (229)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 246
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=95.66 E-value=0.022 Score=54.52 Aligned_cols=89 Identities=18% Similarity=0.208 Sum_probs=56.7
Q ss_pred CCCCHHHHHHHHhcCCCCcEE--eccccCCHHHHHHHHHcCCCEEEEeccCCCH----HHHHHHHHHHHHcCCcEEEEeC
Q 015424 223 FKGSFENLEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLPD----LDIRYMTKICKLLGLTALVEVH 296 (407)
Q Consensus 223 F~Gs~edL~~Vr~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL~~----~~L~~Li~~a~~LGL~aLVEVh 296 (407)
+..+++.++.+++. +++||+ .-..|-++.++.+++.+|||+|+++.+++.. ..++.|.+..+. ..
T Consensus 192 ~~~~~~~i~~l~~~-~~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~~dp~~~~~~l~~~i~~--------~~ 262 (297)
T 2zbt_A 192 IGAPFELVKWVHDH-GRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVRAVAH--------YN 262 (297)
T ss_dssp HTCCHHHHHHHHHH-SSCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGSSCHHHHHHHHHHHHHT--------TT
T ss_pred chhhHHHHHHHHHh-cCCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCCCCHHHHHHHHHHHHHH--------Hh
Confidence 44567778888886 789987 6555559999999999999999999998832 234444444332 23
Q ss_pred CHHHHHHHhcccCCcEEEeecccc
Q 015424 297 DEREMDRVLGIEGIELIGINNRNL 320 (407)
Q Consensus 297 t~eElerAl~l~Ga~iIGINnRdL 320 (407)
+.+.+....+.-|..+.+|+.+.|
T Consensus 263 ~~~~~~~~~~~~g~~~~~~~~~~~ 286 (297)
T 2zbt_A 263 DPEVLAEVSEDLGEPMVGINLDQL 286 (297)
T ss_dssp CHHHHHHHHTTCCCCC--------
T ss_pred chHhhhHHHHhcCceeEEeechhc
Confidence 555665556655677888876655
No 247
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.56 E-value=0.016 Score=52.27 Aligned_cols=74 Identities=18% Similarity=0.135 Sum_probs=57.5
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCc----CC-CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCC
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKY----FK-GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~----F~-Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (407)
++.+.++.+.+.|++.|.+. +.| |. ..++.++.+|+...++||+.-..| .+.++.++..+|||+|+++.++.
T Consensus 115 t~~~~~~~~~~~g~d~i~v~--~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI-~~~~~~~~~~~Gad~vvvGsai~ 191 (211)
T 3f4w_A 115 DLPARVRLLEEAGADMLAVH--TGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGI-SSQTVKDYALLGPDVVIVGSAIT 191 (211)
T ss_dssp SHHHHHHHHHHHTCCEEEEE--CCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSC-CTTTHHHHHTTCCSEEEECHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEc--CCCcccccCCCCHHHHHHHHHHcCCCcEEEECCC-CHHHHHHHHHcCCCEEEECHHHc
Confidence 67888999999999998764 322 21 267889999876227899876555 68899999999999999998887
Q ss_pred CH
Q 015424 273 PD 274 (407)
Q Consensus 273 ~~ 274 (407)
..
T Consensus 192 ~~ 193 (211)
T 3f4w_A 192 HA 193 (211)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 248
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=95.53 E-value=0.42 Score=46.57 Aligned_cols=138 Identities=13% Similarity=0.120 Sum_probs=103.4
Q ss_pred CCCcEE-eccccCCHHHHHHHHHcCCCEEEEeccCCCHH----HHHHHHHHHHHcCCcEEEE-----------------e
Q 015424 238 VKCPLL-CKEFIVDAWQIYYARTKGADAVLLIAAVLPDL----DIRYMTKICKLLGLTALVE-----------------V 295 (407)
Q Consensus 238 v~lPVL-~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~----~L~~Li~~a~~LGL~aLVE-----------------V 295 (407)
.++||- .-|-.-+...+.+|..+|-+.|.++.+-++-+ .-++++++||..|+.+=.| -
T Consensus 79 ~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~y 158 (288)
T 3q94_A 79 ITVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIY 158 (288)
T ss_dssp CCSCEEEEEEEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccC
Confidence 578975 56766778899999999999999999999753 3567888999888766333 2
Q ss_pred CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEE--eeCCCCHHHHHHH
Q 015424 296 HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVG--ESGLFTPDDIAYV 373 (407)
Q Consensus 296 ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVA--ESGI~t~eD~~~l 373 (407)
.|++|+.+..+..|+|.+.+.-=+- || .| +.+...|++...++.+.+ ++++|. .||+ ..++++++
T Consensus 159 T~Peea~~Fv~~TgvD~LAvaiGt~--HG-~Y-~~~p~Ld~~~L~~I~~~v--------~vpLVlHGgSG~-~~e~i~~a 225 (288)
T 3q94_A 159 ADPAECKHLVEATGIDCLAPALGSV--HG-PY-KGEPNLGFAEMEQVRDFT--------GVPLVLHGGTGI-PTADIEKA 225 (288)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCB--SS-CC-SSSCCCCHHHHHHHHHHH--------CSCEEECCCTTC-CHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCEEEEEcCcc--cC-Cc-CCCCccCHHHHHHHHHhc--------CCCEEEeCCCCC-CHHHHHHH
Confidence 5678988777534999998863332 21 24 345788999988887652 244544 5677 77889999
Q ss_pred HHcCCCEEEEccccc
Q 015424 374 QEAGVKAVLVGESIV 388 (407)
Q Consensus 374 ~~~GadaVLVGeaLm 388 (407)
.++|+.-|=|++.+.
T Consensus 226 i~~Gv~KiNi~Tdl~ 240 (288)
T 3q94_A 226 ISLGTSKINVNTENQ 240 (288)
T ss_dssp HHTTEEEEEECHHHH
T ss_pred HHcCCeEEEEChHHH
Confidence 999999999998764
No 249
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=95.53 E-value=0.029 Score=54.84 Aligned_cols=95 Identities=20% Similarity=0.178 Sum_probs=70.3
Q ss_pred CccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEec-CCcC---CCCHHHHHHHHh
Q 015424 160 ARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTD-EKYF---KGSFENLEAVRS 235 (407)
Q Consensus 160 ~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd-~~~F---~Gs~edL~~Vr~ 235 (407)
+..+...++.. + ..||.-+ +..+.|+.+++.|+++|.|-.- .... ..+++.+..+++
T Consensus 99 p~~~i~~l~~~----g-~~v~~~v--------------~~~~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~ 159 (332)
T 2z6i_A 99 PSKYMERFHEA----G-IIVIPVV--------------PSVALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVAT 159 (332)
T ss_dssp GGGTHHHHHHT----T-CEEEEEE--------------SSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHH
T ss_pred hHHHHHHHHHc----C-CeEEEEe--------------CCHHHHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHH
Confidence 45677777753 2 4566544 2235688888999999998532 1111 124677788887
Q ss_pred cCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCH
Q 015424 236 AGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (407)
Q Consensus 236 a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~ 274 (407)
. +++||+.-..|.++.++.++..+|||+|.+..+++..
T Consensus 160 ~-~~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~ 197 (332)
T 2z6i_A 160 A-ISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVA 197 (332)
T ss_dssp H-CSSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTB
T ss_pred h-cCCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcC
Confidence 6 8999999999999999999999999999999887744
No 250
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=95.49 E-value=0.064 Score=48.42 Aligned_cols=101 Identities=22% Similarity=0.204 Sum_probs=66.4
Q ss_pred HHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEE---EeCCHHHHHHHhcccCCcEEEeeccccccccccccc
Q 015424 253 QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV---EVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRT 329 (407)
Q Consensus 253 QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLV---EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~ 329 (407)
++..+...|+|.|.|...- ...++.+.+.++.++...++ -+.+.+.++.++++ |++.|-+...
T Consensus 24 ~~~~~~~~G~~~i~l~~~~--~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~-Gad~V~~~~~----------- 89 (212)
T 2v82_A 24 HVGAVIDAGFDAVEIPLNS--PQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARM-GCQLIVTPNI----------- 89 (212)
T ss_dssp HHHHHHHHTCCEEEEETTS--TTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHT-TCCEEECSSC-----------
T ss_pred HHHHHHHCCCCEEEEeCCC--hhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHc-CCCEEEeCCC-----------
Confidence 3455667899999985543 33455566666777877776 24677899999997 9998754221
Q ss_pred cccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEE
Q 015424 330 ETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLV 383 (407)
Q Consensus 330 ~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLV 383 (407)
+.+.. +..+. .+..++. |++|++++....++|+|.|++
T Consensus 90 -----~~~~~-~~~~~--------~g~~~~~--g~~t~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 90 -----HSEVI-RRAVG--------YGMTVCP--GCATATEAFTALEAGAQALKI 127 (212)
T ss_dssp -----CHHHH-HHHHH--------TTCEEEC--EECSHHHHHHHHHTTCSEEEE
T ss_pred -----CHHHH-HHHHH--------cCCCEEe--ecCCHHHHHHHHHCCCCEEEE
Confidence 12222 22221 1223332 289999999999999999987
No 251
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.41 E-value=0.025 Score=51.39 Aligned_cols=75 Identities=13% Similarity=0.095 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHcCCcEEEEE----ecCCcCCC-----CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEe
Q 015424 198 DPVEIARSYEKGGAACLSIL----TDEKYFKG-----SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLI 268 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVL----Td~~~F~G-----s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLi 268 (407)
++.+ ++.+++.|++.|.+. |+.. +.+ .++.++.+++. +++||+.-..|.++.++.++..+|||+|.++
T Consensus 128 t~~e-~~~~~~~G~d~i~~~~~g~t~~~-~~~~~~~~~~~~~~~~~~~-~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG 204 (223)
T 1y0e_A 128 TVEE-AKNAARLGFDYIGTTLHGYTSYT-QGQLLYQNDFQFLKDVLQS-VDAKVIAEGNVITPDMYKRVMDLGVHCSVVG 204 (223)
T ss_dssp SHHH-HHHHHHTTCSEEECTTTTSSTTS-TTCCTTHHHHHHHHHHHHH-CCSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CHHH-HHHHHHcCCCEEEeCCCcCcCCC-CCCCCCcccHHHHHHHHhh-CCCCEEEecCCCCHHHHHHHHHcCCCEEEEC
Confidence 4555 666888999998752 2222 222 23556677776 7899999888889999999999999999999
Q ss_pred ccCCCHH
Q 015424 269 AAVLPDL 275 (407)
Q Consensus 269 aaiL~~~ 275 (407)
.+++.+.
T Consensus 205 ~al~~p~ 211 (223)
T 1y0e_A 205 GAITRPK 211 (223)
T ss_dssp HHHHCHH
T ss_pred hHHcCcH
Confidence 8877643
No 252
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.39 E-value=1.3 Score=42.43 Aligned_cols=165 Identities=12% Similarity=0.095 Sum_probs=99.3
Q ss_pred HHHHHHHHcCCcEEEEE-ecCCcCCCCHHH-HHHHH---hc-CCCCcEEeccccCCHHH----HHHHHHcCCCEEEEecc
Q 015424 201 EIARSYEKGGAACLSIL-TDEKYFKGSFEN-LEAVR---SA-GVKCPLLCKEFIVDAWQ----IYYARTKGADAVLLIAA 270 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVL-Td~~~F~Gs~ed-L~~Vr---~a-~v~lPVL~KDFIid~~Q----I~eAr~~GADaVLLiaa 270 (407)
++++.+.+.|+++|-|+ |-..++.=+.+. .+.++ +. .-.+||+..=.-.+..+ ...|..+|||+|+++.-
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 106 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITP 106 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCC
Confidence 45566789999999887 212222223332 22222 21 24799997654445543 34467889999999976
Q ss_pred CC---CHHHHHH-HHHHHHHcCCcEEEEe--------CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchh
Q 015424 271 VL---PDLDIRY-MTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSN 338 (407)
Q Consensus 271 iL---~~~~L~~-Li~~a~~LGL~aLVEV--------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~ 338 (407)
.. +++.+.. +-..+...++..++=- =+.+.+.+..+. ..++|| ++-.-|+..
T Consensus 107 ~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgi--------------K~ssgd~~~ 170 (292)
T 3daq_A 107 YYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQH--PYIVAL--------------KDATNDFEY 170 (292)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTS--TTEEEE--------------EECCCCHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcC--CCEEEE--------------EeCCCCHHH
Confidence 43 4555444 4445566677765431 145666666664 479999 554557778
Q ss_pred HHHHhhcccccccccC-CceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015424 339 TKKLLEGERGEIIRQK-NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 391 (407)
Q Consensus 339 t~~L~~~~~~~~i~~~-~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 391 (407)
..+++... +. +..+. +|-. +.+.....+|++|++-|.+=+-+.
T Consensus 171 ~~~~~~~~------~~~~f~v~--~G~d--~~~~~~l~~G~~G~is~~~n~~P~ 214 (292)
T 3daq_A 171 LEEVKKRI------DTNSFALY--SGND--DNVVEYYQRGGQGVISVIANVIPK 214 (292)
T ss_dssp HHHHHTTS------CTTTSEEE--ESCG--GGHHHHHHTTCCEEEESGGGTCHH
T ss_pred HHHHHHHC------CCCCEEEE--ECCH--HHHHHHHhcCCCEEEeCHHHhhHH
Confidence 88887652 23 44443 3442 235566789999999887755433
No 253
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=95.37 E-value=0.17 Score=46.67 Aligned_cols=118 Identities=14% Similarity=0.204 Sum_probs=74.0
Q ss_pred HHHHhcCCCCcEE-ecc----ccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEe--CCHHHHHH
Q 015424 231 EAVRSAGVKCPLL-CKE----FIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEV--HDEREMDR 303 (407)
Q Consensus 231 ~~Vr~a~v~lPVL-~KD----FIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEV--ht~eEler 303 (407)
+.++++ +.||+ .-| +--|.+-+.--...++|+|+=- . ..+++.|+++||.++-=+ =|..-++.
T Consensus 50 ~~ik~~--gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGIIsT-----k---~~~i~~Akk~GL~tIqR~FliDs~al~~ 119 (188)
T 1vkf_A 50 KILKDR--GKTVFVDMDFVNGLGEGEEAILFVKKAGADGIITI-----K---PKNYVVAKKNGIPAVLRFFALDSKAVER 119 (188)
T ss_dssp HHHHHT--TCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEES-----C---HHHHHHHHHTTCCEEEEEECCSHHHHHH
T ss_pred HHHHHC--CCeEEEecCcccccCCCHHHHHHHHhcCCCEEEcC-----c---HHHHHHHHHcCCEEeeEEEEEEeHHHhh
Confidence 344554 67765 334 4467776654477799997641 2 337788999999994332 23333333
Q ss_pred Hhcc---cCCcEEEeeccccccccccccccccccCchh-HHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCC
Q 015424 304 VLGI---EGIELIGINNRNLAISIFSYRTETFEVDNSN-TKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVK 379 (407)
Q Consensus 304 Al~l---~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~-t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gad 379 (407)
..+. ..++++=+- +.. .-++++. + .++++|+.|||+|+||+.. .++||+
T Consensus 120 ~~~~I~~~kPD~iEiL-------------------Pg~v~p~~I~~-----v--~~~PiIaGGlI~t~edv~~-l~aGA~ 172 (188)
T 1vkf_A 120 GIEQIETLGVDVVEVL-------------------PGAVAPKVARK-----I--PGRTVIAAGLVETEEEARE-ILKHVS 172 (188)
T ss_dssp HHHHHHHHTCSEEEEE-------------------SGGGHHHHHTT-----S--TTSEEEEESCCCSHHHHHH-HTTTSS
T ss_pred hhhhccccCCCeEeec-------------------CCCchHHHHHH-----h--cCCCEEEECCcCCHHHHHH-HHCCCe
Confidence 2221 245554331 111 2244443 2 3679999999999999999 999999
Q ss_pred EEEEcc
Q 015424 380 AVLVGE 385 (407)
Q Consensus 380 aVLVGe 385 (407)
+|..|+
T Consensus 173 aIsTs~ 178 (188)
T 1vkf_A 173 AISTSS 178 (188)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 999885
No 254
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=95.31 E-value=0.025 Score=53.81 Aligned_cols=75 Identities=19% Similarity=0.137 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHcCC-cE--EEEEecCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCC
Q 015424 198 DPVEIARSYEKGGA-AC--LSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (407)
Q Consensus 198 dp~~iA~ay~~~GA-~a--ISVLTd~~~F~Gs~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (407)
+|. .++.|.+.|. .. +--+.- .--.+..+.++.+|+. + ++||.....|.++.|+.++.. |||+|+++.++..
T Consensus 140 ~~~-~~~~~a~~g~~~~~~~VYl~s-~G~~~~~~~i~~i~~~-~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~ 215 (240)
T 1viz_A 140 NMD-DIVAYARVSELLQLPIFYLEY-SGVLGDIEAVKKTKAV-LETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYE 215 (240)
T ss_dssp CHH-HHHHHHHHHHHTTCSEEEEEC-TTSCCCHHHHHHHHHT-CSSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHH
T ss_pred CHH-HHHHHHHhCcccCCCEEEEeC-CCccChHHHHHHHHHh-cCCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHh
Confidence 566 6777776663 22 222222 2235678999999986 8 999999999999999999888 9999999999885
Q ss_pred HHH
Q 015424 274 DLD 276 (407)
Q Consensus 274 ~~~ 276 (407)
+.+
T Consensus 216 ~~~ 218 (240)
T 1viz_A 216 DFD 218 (240)
T ss_dssp CHH
T ss_pred CHH
Confidence 544
No 255
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=95.29 E-value=0.13 Score=45.98 Aligned_cols=113 Identities=16% Similarity=0.235 Sum_probs=69.6
Q ss_pred CcEEeccccCCHHHHH-HHHHcCCCEEEEeccCCCHHHHHHHHHHHHHc---CCcEEE-EeCCHHHHHHHhcccCCcEEE
Q 015424 240 CPLLCKEFIVDAWQIY-YARTKGADAVLLIAAVLPDLDIRYMTKICKLL---GLTALV-EVHDEREMDRVLGIEGIELIG 314 (407)
Q Consensus 240 lPVL~KDFIid~~QI~-eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~L---GL~aLV-EVht~eElerAl~l~Ga~iIG 314 (407)
+|+++-.-.-+..++. .+...|+|.|-+....- ...+.++.+++. ++..-+ .++|.++++.+.+. |+++|
T Consensus 13 i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~~---~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~-Gad~i- 87 (205)
T 1wa3_A 13 VAVLRANSVEEAKEKALAVFEGGVHLIEITFTVP---DADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVES-GAEFI- 87 (205)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTTCCEEEEETTST---THHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHH-TCSEE-
T ss_pred EEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCh---hHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHc-CCCEE-
Confidence 5676543222223333 35678999997755432 222334444442 344444 57999999999997 99999
Q ss_pred eeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEE
Q 015424 315 INNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLV 383 (407)
Q Consensus 315 INnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLV 383 (407)
+. .++ . ....+..+. .++.++. |+.|++++.++.++|+|.|-+
T Consensus 88 v~-~~~------------~---~~~~~~~~~--------~g~~vi~--g~~t~~e~~~a~~~Gad~vk~ 130 (205)
T 1wa3_A 88 VS-PHL------------D---EEISQFCKE--------KGVFYMP--GVMTPTELVKAMKLGHTILKL 130 (205)
T ss_dssp EC-SSC------------C---HHHHHHHHH--------HTCEEEC--EECSHHHHHHHHHTTCCEEEE
T ss_pred Ec-CCC------------C---HHHHHHHHH--------cCCcEEC--CcCCHHHHHHHHHcCCCEEEE
Confidence 63 122 1 112233222 2556665 788999999999999998865
No 256
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=95.28 E-value=0.031 Score=54.30 Aligned_cols=78 Identities=21% Similarity=0.204 Sum_probs=60.1
Q ss_pred CCHHHHHHHHHHcCCcEEEEEe--cCCcCCC--CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHH-cCCCEEEEeccC
Q 015424 197 FDPVEIARSYEKGGAACLSILT--DEKYFKG--SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYART-KGADAVLLIAAV 271 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLT--d~~~F~G--s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~-~GADaVLLiaai 271 (407)
.+..++|+.+++.|+++|.|-. ....+.| .++.+..+++ ++||+.-..|.++.++.++.+ .|||+|.+.-.+
T Consensus 140 ~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~---~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~ 216 (318)
T 1vhn_A 140 NEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK---RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGA 216 (318)
T ss_dssp CCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC---SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc---CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHH
Confidence 3566999999999999999852 1122233 4444555543 799999999999999999988 799999999888
Q ss_pred CCHHHH
Q 015424 272 LPDLDI 277 (407)
Q Consensus 272 L~~~~L 277 (407)
+.+.++
T Consensus 217 l~~P~l 222 (318)
T 1vhn_A 217 IGRPWI 222 (318)
T ss_dssp TTCTTH
T ss_pred HhCcch
Confidence 876665
No 257
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=95.28 E-value=0.11 Score=51.95 Aligned_cols=122 Identities=19% Similarity=0.160 Sum_probs=79.1
Q ss_pred HHHHHcCCCEEEEeccC-------CCH-----------------HHHHHHHHHHHH-cCC-cEEEEeCC-----------
Q 015424 255 YYARTKGADAVLLIAAV-------LPD-----------------LDIRYMTKICKL-LGL-TALVEVHD----------- 297 (407)
Q Consensus 255 ~eAr~~GADaVLLiaai-------L~~-----------------~~L~~Li~~a~~-LGL-~aLVEVht----------- 297 (407)
..|..+|.|+|=|.++- |++ .-+.++++.+++ .|- .+.|-++-
T Consensus 160 ~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~ 239 (362)
T 4ab4_A 160 ENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDAD 239 (362)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTT
T ss_pred HHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCC
Confidence 34678999999998773 111 112344444443 343 45555441
Q ss_pred -HHH---HHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHH
Q 015424 298 -ERE---MDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYV 373 (407)
Q Consensus 298 -~eE---lerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l 373 (407)
.++ +-+.++-.|+++|-+-++.. .. +....+.+. -++++|+-||| |++++..+
T Consensus 240 ~~~~~~~la~~l~~~Gvd~i~v~~~~~---------~~-----~~~~~ik~~--------~~iPvi~~Ggi-t~e~a~~~ 296 (362)
T 4ab4_A 240 RAETFTYVARELGKRGIAFICSREREA---------DD-----SIGPLIKEA--------FGGPYIVNERF-DKASANAA 296 (362)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCC---------TT-----CCHHHHHHH--------HCSCEEEESSC-CHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCEEEECCCCC---------CH-----HHHHHHHHH--------CCCCEEEeCCC-CHHHHHHH
Confidence 222 22333324899998876532 10 224444443 14589999999 99999999
Q ss_pred HHcC-CCEEEEcccccCCCChHHHHHh
Q 015424 374 QEAG-VKAVLVGESIVKQDDPGKGITG 399 (407)
Q Consensus 374 ~~~G-adaVLVGeaLmk~~dp~~~i~~ 399 (407)
.+.| ||.|.+|.+++..+|...++++
T Consensus 297 l~~g~aD~V~iGR~~lanPdl~~k~~~ 323 (362)
T 4ab4_A 297 LASGKADAVAFGVPFIANPDLPARLAA 323 (362)
T ss_dssp HHTTSCSEEEESHHHHHCTTHHHHHHT
T ss_pred HHcCCccEEEECHHhHhCcHHHHHHHc
Confidence 9998 9999999999999998887765
No 258
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=95.28 E-value=0.022 Score=58.59 Aligned_cols=74 Identities=15% Similarity=0.118 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHcCCcEEEEEecC----------CcCCC---------CHHHHHHHHhcCC--CCcEEeccccCCHHHHHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDE----------KYFKG---------SFENLEAVRSAGV--KCPLLCKEFIVDAWQIYY 256 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~----------~~F~G---------s~edL~~Vr~a~v--~lPVL~KDFIid~~QI~e 256 (407)
+..++|+..++.||++|.|-.-- ..++| +.+.+..+++. + ++||+.-..|.++.++++
T Consensus 312 d~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~-v~~~iPVIg~GGI~s~~DA~e 390 (443)
T 1tv5_A 312 QKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNY-TNKQIPIIASGGIFSGLDALE 390 (443)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHH-TTTCSCEEEESSCCSHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHH-cCCCCcEEEECCCCCHHHHHH
Confidence 57788999999999999886310 01122 35778888886 7 899999999999999999
Q ss_pred HHHcCCCEEEEeccCC
Q 015424 257 ARTKGADAVLLIAAVL 272 (407)
Q Consensus 257 Ar~~GADaVLLiaaiL 272 (407)
+..+|||+|.+...++
T Consensus 391 ~l~aGAd~Vqigrall 406 (443)
T 1tv5_A 391 KIEAGASVCQLYSCLV 406 (443)
T ss_dssp HHHTTEEEEEESHHHH
T ss_pred HHHcCCCEEEEcHHHH
Confidence 9999999999988766
No 259
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=95.27 E-value=1.2 Score=43.36 Aligned_cols=165 Identities=16% Similarity=0.181 Sum_probs=99.8
Q ss_pred HHHHHHHHcCCcEEEEE-ecCCcCCCCHHH-HHHHH---h-cCCCCcEEeccccCCHH----HHHHHHHcCCCEEEEecc
Q 015424 201 EIARSYEKGGAACLSIL-TDEKYFKGSFEN-LEAVR---S-AGVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIAA 270 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVL-Td~~~F~Gs~ed-L~~Vr---~-a~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLiaa 270 (407)
++++.+.+.|+++|-++ |-.+++.=+.+. .+.++ + ..-.+||+..=.-.+.. +...|..+|||+|+++.-
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 127 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTP 127 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44556678999999887 222222223333 22222 2 12469999765444444 334577899999999976
Q ss_pred CC---CHHHHHH-HHHHHHHcCCcEEEEe--------CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchh
Q 015424 271 VL---PDLDIRY-MTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSN 338 (407)
Q Consensus 271 iL---~~~~L~~-Li~~a~~LGL~aLVEV--------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~ 338 (407)
.. +++.+.. +...+...++.+++=- =+.+.+.+..+. ..++|| ++-.-|+..
T Consensus 128 ~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgi--------------Kdssgd~~~ 191 (314)
T 3qze_A 128 YYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKV--PNIIGI--------------KEATGDLQR 191 (314)
T ss_dssp CSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHTS--TTEEEE--------------EECSCCHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcC--CCEEEE--------------EcCCCCHHH
Confidence 44 4555444 4455666777775531 145566665554 579999 444557777
Q ss_pred HHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015424 339 TKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 391 (407)
Q Consensus 339 t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 391 (407)
..+++... +++..+ -+|-. +.+.....+|++|++-|.+=+-+.
T Consensus 192 ~~~~~~~~------~~~f~v--~~G~d--~~~l~~l~~Ga~G~is~~an~~P~ 234 (314)
T 3qze_A 192 AKEVIERV------GKDFLV--YSGDD--ATAVELMLLGGKGNISVTANVAPR 234 (314)
T ss_dssp HHHHHHHS------CTTSEE--EESCG--GGHHHHHHTTCCEEEESGGGTCHH
T ss_pred HHHHHHHc------CCCeEE--EecCh--HHHHHHHHCCCCEEEecHHhhhHH
Confidence 77776642 234444 34442 235566789999999887765443
No 260
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=95.27 E-value=0.38 Score=48.10 Aligned_cols=186 Identities=11% Similarity=0.062 Sum_probs=116.2
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEe-------cCCc--CCC----------------CHHHH
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT-------DEKY--FKG----------------SFENL 230 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLT-------d~~~--F~G----------------s~edL 230 (407)
.+.||||+=-. ..|. -.-..+++.+..++||+|+---| -+.. |++ +.+.+
T Consensus 19 ~~~iIAe~g~N--H~gs---~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~ 93 (349)
T 2wqp_A 19 EPLIICEIGIN--HEGS---LKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDE 93 (349)
T ss_dssp CCEEEEEEETT--TTTC---HHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHH
T ss_pred ceEEEEecCCc--ccCC---HHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHH
Confidence 48899998211 1122 22466778888999999998762 1222 663 33444
Q ss_pred HHH---HhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC--CHHHHHHHh
Q 015424 231 EAV---RSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH--DEREMDRVL 305 (407)
Q Consensus 231 ~~V---r~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh--t~eElerAl 305 (407)
..+ ++. ..+|+++-= .|+.++.....+|+|++=+.+.-+.+-.| ++.+-+.|..+++-.. |.+|++.|+
T Consensus 94 ~~L~~~~~~-~Gi~~~st~--~d~~svd~l~~~~v~~~KI~S~~~~n~~L---L~~va~~gkPviLstGmat~~Ei~~Av 167 (349)
T 2wqp_A 94 IKLKEYVES-KGMIFISTL--FSRAAALRLQRMDIPAYKIGSGECNNYPL---IKLVASFGKPIILSTGMNSIESIKKSV 167 (349)
T ss_dssp HHHHHHHHH-TTCEEEEEE--CSHHHHHHHHHHTCSCEEECGGGTTCHHH---HHHHHTTCSCEEEECTTCCHHHHHHHH
T ss_pred HHHHHHHHH-hCCeEEEee--CCHHHHHHHHhcCCCEEEECcccccCHHH---HHHHHhcCCeEEEECCCCCHHHHHHHH
Confidence 444 444 678888754 67888988888999999999998877443 4555566777777654 889988877
Q ss_pred cc---cCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEE
Q 015424 306 GI---EGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVL 382 (407)
Q Consensus 306 ~l---~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVL 382 (407)
+. .|.+++=. .+ ...|++....+|+.....|.+.. .+++|+..+-=....-......+||+ +
T Consensus 168 e~i~~~G~~iiLl-hc-----~s~Yp~~~~~~nL~ai~~lk~~f-------~~lpVg~sdHt~G~~~~~AAvAlGA~--i 232 (349)
T 2wqp_A 168 EIIREAGVPYALL-HC-----TNIYPTPYEDVRLGGMNDLSEAF-------PDAIIGLSDHTLDNYACLGAVALGGS--I 232 (349)
T ss_dssp HHHHHHTCCEEEE-EC-----CCCSSCCGGGCCTHHHHHHHHHC-------TTSEEEEECCSSSSHHHHHHHHHTCC--E
T ss_pred HHHHHcCCCEEEE-ec-----cCCCCCChhhcCHHHHHHHHHHC-------CCCCEEeCCCCCcHHHHHHHHHhCCC--E
Confidence 53 24444332 12 23444444568888877765541 14555544322234445555678999 5
Q ss_pred Ecccc
Q 015424 383 VGESI 387 (407)
Q Consensus 383 VGeaL 387 (407)
|=.-+
T Consensus 233 IEkH~ 237 (349)
T 2wqp_A 233 LERHF 237 (349)
T ss_dssp EEEEB
T ss_pred EEeCC
Confidence 54443
No 261
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=95.25 E-value=0.82 Score=43.91 Aligned_cols=164 Identities=13% Similarity=0.059 Sum_probs=99.3
Q ss_pred HHHHHHHHHcCCcEEEEE-ecCCcCCCCH-HHHHHHH---hc-CCCCcEEeccccCCHH----HHHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSIL-TDEKYFKGSF-ENLEAVR---SA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVL-Td~~~F~Gs~-edL~~Vr---~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-++ |-..++.=|. |..+.++ +. .-.+||+..=.-.+.. +...|..+|||+|++..
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (292)
T 2vc6_A 24 HDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVS 103 (292)
T ss_dssp HHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcC
Confidence 355666788999999876 2222222233 2333222 21 2369999765444443 23446789999999998
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEE-------e-CCHHHHHHHhc-ccCCcEEEeeccccccccccccccccccCc
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVE-------V-HDEREMDRVLG-IEGIELIGINNRNLAISIFSYRTETFEVDN 336 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVE-------V-ht~eElerAl~-l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl 336 (407)
-.. +++.+.. +-..+...++.+++= + -+.+.+.+..+ . ..++|| ++-.-|+
T Consensus 104 P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pnIvgi--------------K~s~gd~ 167 (292)
T 2vc6_A 104 PYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDC--PNVKGV--------------XDATGNL 167 (292)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHC--TTEEEE--------------EECSCCT
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhC--CCEEEE--------------ecCCCCH
Confidence 755 5555544 445566678877661 1 14555655555 4 479999 4445577
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
....+++... ++++.+. +|-. +.+.....+|++|++-|.+=+-
T Consensus 168 ~~~~~~~~~~------~~~f~v~--~G~d--~~~~~~l~~G~~G~is~~~n~~ 210 (292)
T 2vc6_A 168 LRPSLERMAC------GEDFNLL--TGED--GTALGYMAHGGHGCISVTANVA 210 (292)
T ss_dssp HHHHHHHHHS------CTTSEEE--ESCG--GGHHHHHHTTCCEEEESGGGTC
T ss_pred HHHHHHHHHc------CCCEEEE--ECch--HHHHHHHHcCCCEEEecHHHhC
Confidence 7777776542 2344443 5532 2355667899999999877553
No 262
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=95.23 E-value=0.014 Score=58.17 Aligned_cols=79 Identities=16% Similarity=0.148 Sum_probs=61.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEE-------------ecC------CcCCC---------CHHHHHHHHhcCC--CCcE
Q 015424 193 LREDFDPVEIARSYEKGGAACLSIL-------------TDE------KYFKG---------SFENLEAVRSAGV--KCPL 242 (407)
Q Consensus 193 i~~~~dp~~iA~ay~~~GA~aISVL-------------Td~------~~F~G---------s~edL~~Vr~a~v--~lPV 242 (407)
|+++++..++|+..+.+||++|+.+ +.. .-++| +++.+..+++. + ++||
T Consensus 200 i~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~-~~~~ipI 278 (345)
T 3oix_A 200 LPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKR-LNPSIQI 278 (345)
T ss_dssp ECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTT-SCTTSEE
T ss_pred ECCCCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHH-cCCCCcE
Confidence 4456799999999999999887632 111 11233 25788888886 7 7999
Q ss_pred EeccccCCHHHHHHHHHcCCCEEEEecc-CC
Q 015424 243 LCKEFIVDAWQIYYARTKGADAVLLIAA-VL 272 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~GADaVLLiaa-iL 272 (407)
+.-..|.+..++.++..+|||+|.+..+ ++
T Consensus 279 Ig~GGI~s~~da~~~l~aGAd~V~igra~~~ 309 (345)
T 3oix_A 279 IGTGGVXTGRDAFEHILCGASMVQIGTALHQ 309 (345)
T ss_dssp EEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred EEECCCCChHHHHHHHHhCCCEEEEChHHHh
Confidence 9999999999999999999999999887 44
No 263
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.21 E-value=0.012 Score=54.10 Aligned_cols=71 Identities=10% Similarity=0.027 Sum_probs=55.4
Q ss_pred HHHHHHHcCCcEEE--EEe--cC--CcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCH
Q 015424 202 IARSYEKGGAACLS--ILT--DE--KYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (407)
Q Consensus 202 iA~ay~~~GA~aIS--VLT--d~--~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~ 274 (407)
-++.+.+.||+.|+ +.. .. .+++-+++.++.+++. ++||+.-..|.++.++.++..+|||+|+++.+++.+
T Consensus 145 ea~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~--~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~p 221 (234)
T 1yxy_A 145 EGLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKA--GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITRP 221 (234)
T ss_dssp HHHHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHCH
T ss_pred HHHHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhCh
Confidence 37888889999993 221 11 1344467778888874 899999888888999999999999999999887764
No 264
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.20 E-value=1.4 Score=42.37 Aligned_cols=165 Identities=12% Similarity=0.113 Sum_probs=99.2
Q ss_pred HHHHHHHHcCCcEEEEEe-cCCcCCCCHHHH-HHHH---hc-CCCCcEEeccccCCHH----HHHHHHHcCCCEEEEecc
Q 015424 201 EIARSYEKGGAACLSILT-DEKYFKGSFENL-EAVR---SA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIAA 270 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVLT-d~~~F~Gs~edL-~~Vr---~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLiaa 270 (407)
++++.+.+.|+++|-++. -..++.=|.+.- +.++ +. .-.+||+..=.-.+.. +...|..+|||+|+++.-
T Consensus 32 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 111 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVP 111 (297)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 445667889999999872 122222233332 2222 21 2469999765444444 234577899999999976
Q ss_pred CC---CHHHHHH-HHHHHHHcCCcEEEEe--------CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchh
Q 015424 271 VL---PDLDIRY-MTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSN 338 (407)
Q Consensus 271 iL---~~~~L~~-Li~~a~~LGL~aLVEV--------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~ 338 (407)
.. +++.+.. +-..+...++..++=- =+.+.+.+..+. ..++|| ++-.-|+..
T Consensus 112 ~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgi--------------Kdssgd~~~ 175 (297)
T 3flu_A 112 YYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEI--PNIVGV--------------KEASGNIGS 175 (297)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTS--TTEEEE--------------EECSCCHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHcC--CCEEEE--------------EeCCCCHHH
Confidence 53 5555444 4455666777775431 145556665554 579999 444567777
Q ss_pred HHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015424 339 TKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 391 (407)
Q Consensus 339 t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 391 (407)
..+++... +++..+ -+|-. +.+-....+|++|++-|.+=+-+.
T Consensus 176 ~~~~~~~~------~~~f~v--~~G~d--~~~l~~l~~G~~G~is~~an~~P~ 218 (297)
T 3flu_A 176 NIELINRA------PEGFVV--LSGDD--HTALPFMLCGGHGVITVAANAAPK 218 (297)
T ss_dssp HHHHHHHS------CTTCEE--EECCG--GGHHHHHHTTCCEEEESGGGTCHH
T ss_pred HHHHHHhc------CCCeEE--EECcH--HHHHHHHhCCCCEEEechHhhhHH
Confidence 77777642 234444 34432 234566789999999887765443
No 265
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=95.19 E-value=0.022 Score=54.77 Aligned_cols=74 Identities=14% Similarity=0.069 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHcC-CcEEEEEe--------cC--C--------cCC---C------CHHHHHHHHhcCC-CCcEEecccc
Q 015424 198 DPVEIARSYEKGG-AACLSILT--------DE--K--------YFK---G------SFENLEAVRSAGV-KCPLLCKEFI 248 (407)
Q Consensus 198 dp~~iA~ay~~~G-A~aISVLT--------d~--~--------~F~---G------s~edL~~Vr~a~v-~lPVL~KDFI 248 (407)
+..++|+.++++| +++|.|-. |. . .++ | +++.+..+++. + ++||+.-..|
T Consensus 175 ~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~-~~~ipvi~~GGI 253 (314)
T 2e6f_A 175 HFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRR-CPDKLVFGCGGV 253 (314)
T ss_dssp HHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHH-CTTSEEEEESSC
T ss_pred HHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHh-cCCCCEEEECCC
Confidence 4556688999999 99998642 10 0 112 2 26788888887 7 9999999999
Q ss_pred CCHHHHHHHHHcCCCEEEEeccCC
Q 015424 249 VDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 249 id~~QI~eAr~~GADaVLLiaaiL 272 (407)
.++.++.++..+|||+|.+...++
T Consensus 254 ~~~~da~~~l~~GAd~V~ig~~~l 277 (314)
T 2e6f_A 254 YSGEDAFLHILAGASMVQVGTALQ 277 (314)
T ss_dssp CSHHHHHHHHHHTCSSEEECHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEchhhH
Confidence 999999999999999999998887
No 266
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=95.17 E-value=0.68 Score=44.70 Aligned_cols=177 Identities=15% Similarity=0.122 Sum_probs=100.1
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhc--CCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a--~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~ 275 (407)
+|. .++.....||++|-+-.|. ...+.+.+....++ ....|++.+=.-.++++|..+..+|+|+|++ -.+-+.+
T Consensus 49 ~p~-~~e~a~~~GaD~v~lDlEh--~~~~~~~~~~~l~a~~~~~~~~~VRv~~~d~~di~~~ld~ga~~Iml-P~V~sae 124 (287)
T 2v5j_A 49 SSY-SAELLAGAGFDWLLIDGEH--APNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGTQTLLV-PMVQNAD 124 (287)
T ss_dssp CHH-HHHHHHTSCCSEEEEESSS--SSCCHHHHHHHHHHHTTSSSEEEEECSSSCHHHHHHHHHTTCCEEEE-SCCCSHH
T ss_pred CHH-HHHHHHhCCCCEEEEeCCC--ccchHHHHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHhCCCCEEEe-CCCCCHH
Confidence 444 4455567899977554333 34455555544321 1245565443346789999999999998876 6666778
Q ss_pred HHHHHHHHHHH-----------------c------------CCcEEEEeCCHHHHH---HHhcccCCcEEEeeccccccc
Q 015424 276 DIRYMTKICKL-----------------L------------GLTALVEVHDEREMD---RVLGIEGIELIGINNRNLAIS 323 (407)
Q Consensus 276 ~L~~Li~~a~~-----------------L------------GL~aLVEVht~eEle---rAl~l~Ga~iIGINnRdL~~~ 323 (407)
+++.+++.++. + .+.+++-+-|.+-++ ..+..+|.+.+.|-.-||...
T Consensus 125 ea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~n~deIaa~~~vD~l~iG~~DLs~~ 204 (287)
T 2v5j_A 125 EAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFIGPADLSAD 204 (287)
T ss_dssp HHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHHH
T ss_pred HHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHHHHHHHhCcCCCCEEEECHHHHHHH
Confidence 88888775531 0 133444444444333 333334677777777788443
Q ss_pred cccccccccccCchh-HHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEccc
Q 015424 324 IFSYRTETFEVDNSN-TKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 386 (407)
Q Consensus 324 ~~~~t~~Tf~vDl~~-t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 386 (407)
.. +......+.+.. ..+++...+ ..++.+..- ..+++.+..+.+.|++.+.+|..
T Consensus 205 lg-~~~~~~~p~v~~a~~~iv~aar-----aaG~~~gv~--~~d~~~a~~~~~~G~~~~s~~~d 260 (287)
T 2v5j_A 205 MG-YAGNPQHPEVQAAIEQAIVQIR-----ESGKAPGIL--IANEQLAKRYLELGALFVAVGVD 260 (287)
T ss_dssp TT-STTCCCSHHHHHHHHHHHHHHH-----HTTSEEEEE--CCCHHHHHHHHHTTCSEEEEEEH
T ss_pred hC-CCCCCCCHHHHHHHHHHHHHHH-----HcCCeeEEe--cCCHHHHHHHHHhCCCEEEECcH
Confidence 32 211111111111 122222211 123333222 24899999999999999999964
No 267
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.13 E-value=0.046 Score=52.63 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=70.2
Q ss_pred ceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEe-cCCcCCCCHHHHHHHHhcCC--CCcEEeccccCCHHH
Q 015424 177 PALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT-DEKYFKGSFENLEAVRSAGV--KCPLLCKEFIVDAWQ 253 (407)
Q Consensus 177 ~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLT-d~~~F~Gs~edL~~Vr~a~v--~lPVL~KDFIid~~Q 253 (407)
+.+++|+ .++.++.++. +.||+.|.|.. +.+-|.-+++.+..+++. + ++||++-..|-++.+
T Consensus 163 l~~lvev-------------~t~ee~~~A~-~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~-v~~~~pvVaegGI~t~ed 227 (272)
T 3qja_A 163 MTALVEV-------------HTEQEADRAL-KAGAKVIGVNARDLMTLDVDRDCFARIAPG-LPSSVIRIAESGVRGTAD 227 (272)
T ss_dssp CEEEEEE-------------SSHHHHHHHH-HHTCSEEEEESBCTTTCCBCTTHHHHHGGG-SCTTSEEEEESCCCSHHH
T ss_pred CcEEEEc-------------CCHHHHHHHH-HCCCCEEEECCCcccccccCHHHHHHHHHh-CcccCEEEEECCCCCHHH
Confidence 5677776 3666765555 56999999973 334566778888888875 5 799999888888999
Q ss_pred HHHHHHcCCCEEEEeccCCCHHHHHHHHHHHH
Q 015424 254 IYYARTKGADAVLLIAAVLPDLDIRYMTKICK 285 (407)
Q Consensus 254 I~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~ 285 (407)
+.+.+.+|||+|+++.+++...+....++...
T Consensus 228 v~~l~~~GadgvlVGsal~~a~dp~~~~~~l~ 259 (272)
T 3qja_A 228 LLAYAGAGADAVLVGEGLVTSGDPRAAVADLV 259 (272)
T ss_dssp HHHHHHTTCSEEEECHHHHTCSCHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHH
Confidence 99999999999999999875444444444433
No 268
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=95.11 E-value=0.099 Score=46.27 Aligned_cols=94 Identities=20% Similarity=0.186 Sum_probs=71.1
Q ss_pred CCHHHHHHHHHHcCCcEEEEEe--cCCcCCCC-HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCC-
Q 015424 197 FDPVEIARSYEKGGAACLSILT--DEKYFKGS-FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL- 272 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLT--d~~~F~Gs-~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL- 272 (407)
.++.++.+.+...|+..+-+.. ..+..+|- .+.+..+++. +++|++.-..+-++.++.++..+|||+++.+.++.
T Consensus 130 ~~~~~~i~~~~~~~~~~vli~~~~~~g~~~g~~~~~i~~~~~~-~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~ 208 (237)
T 3cwo_X 130 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 208 (237)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTTTCCSCCCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred cCHHHHHHHHhhcCCCeEEEEecCCCCccccccHHHHHHHHHh-cCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHc
Confidence 4788888999888888676554 44444442 6677777775 79999998888999999999889999999988874
Q ss_pred CHHHHHHHHHHHHHcCCcE
Q 015424 273 PDLDIRYMTKICKLLGLTA 291 (407)
Q Consensus 273 ~~~~L~~Li~~a~~LGL~a 291 (407)
.+.++.++.+..++.|...
T Consensus 209 ~~~~~~~~~~~l~~~~~~~ 227 (237)
T 3cwo_X 209 REIDVRELKEYLKKHGVNV 227 (237)
T ss_dssp TSSCHHHHHHHHHTTTCCC
T ss_pred CCCCHHHHHHHHHHCCCce
Confidence 3346777777777666643
No 269
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=95.11 E-value=0.14 Score=49.43 Aligned_cols=89 Identities=18% Similarity=0.218 Sum_probs=68.6
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccc
Q 015424 273 PDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIR 352 (407)
Q Consensus 273 ~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~ 352 (407)
..+.++.|.++++++||.++.|++|.+.++.+.++ ++++-|-.|+. . |+.....+.+
T Consensus 87 g~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~--vd~~kIgs~~~---------~----n~~ll~~~a~-------- 143 (276)
T 1vs1_A 87 GLEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY--ADMLQIGARNM---------Q----NFPLLREVGR-------- 143 (276)
T ss_dssp THHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH--CSEEEECGGGT---------T----CHHHHHHHHH--------
T ss_pred CHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh--CCeEEECcccc---------c----CHHHHHHHHc--------
Confidence 36789999999999999999999999999999886 79999988877 3 3333334432
Q ss_pred cCCceEEEeeCCC-CHHHHHHH----HHcCCCEEEEcc
Q 015424 353 QKNIIVVGESGLF-TPDDIAYV----QEAGVKAVLVGE 385 (407)
Q Consensus 353 ~~~v~vVAESGI~-t~eD~~~l----~~~GadaVLVGe 385 (407)
.+.+|+..-|.. |++++... ...|..-+++-+
T Consensus 144 -~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~ 180 (276)
T 1vs1_A 144 -SGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVE 180 (276)
T ss_dssp -HTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred -cCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 256888899997 99998764 456886666633
No 270
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=95.06 E-value=0.046 Score=50.54 Aligned_cols=76 Identities=9% Similarity=0.058 Sum_probs=54.6
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCC-------HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEecc
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGS-------FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs-------~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa 270 (407)
++.+.++.+..+....|.+++-+++.++. ++.++.+++. +++||+.-..|.++.++.+...+|||+|.++.+
T Consensus 144 t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~-~~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsa 222 (248)
T 1geq_A 144 TPDERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRI-CRNKVAVGFGVSKREHVVSLLKEGANGVVVGSA 222 (248)
T ss_dssp CCHHHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhh-cCCCEEEEeecCCHHHHHHHHHcCCCEEEEcHH
Confidence 56677888877633367676655444331 3467777776 789999988888889999999999999999988
Q ss_pred CCCH
Q 015424 271 VLPD 274 (407)
Q Consensus 271 iL~~ 274 (407)
+...
T Consensus 223 i~~~ 226 (248)
T 1geq_A 223 LVKI 226 (248)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 7743
No 271
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=95.01 E-value=0.85 Score=44.37 Aligned_cols=138 Identities=15% Similarity=0.194 Sum_probs=101.6
Q ss_pred CCCcEE-eccccCCHHHHHHHHHcCCCEEEEeccCCCHH----HHHHHHHHHHHcCCcEEEE------------------
Q 015424 238 VKCPLL-CKEFIVDAWQIYYARTKGADAVLLIAAVLPDL----DIRYMTKICKLLGLTALVE------------------ 294 (407)
Q Consensus 238 v~lPVL-~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~----~L~~Li~~a~~LGL~aLVE------------------ 294 (407)
.++||. .-|-.-+...+.+|..+|-+.|.++.+-++-+ ..++++++||..|+.+=.|
T Consensus 73 ~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~ 152 (286)
T 1gvf_A 73 YNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESA 152 (286)
T ss_dssp TTSCBEEEEEEECCHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CC
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHcCCCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccc
Confidence 578874 56666678899999999999999999999753 3567889999887766211
Q ss_pred -eCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEE--eeCCCCHHHHH
Q 015424 295 -VHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVG--ESGLFTPDDIA 371 (407)
Q Consensus 295 -Vht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVA--ESGI~t~eD~~ 371 (407)
-.|++|+.+..+..|+|.+.+.-=+- =|.-+.+...|++...++.+.+ ++++|. .||+ ..++++
T Consensus 153 ~~T~Peea~~Fv~~TgvD~LAvaiGt~----HG~Y~~~p~Ld~~~L~~I~~~~--------~vpLVlHGgSG~-~~e~i~ 219 (286)
T 1gvf_A 153 FLTDPQEAKRFVELTGVDSLAVAIGTA----HGLYSKTPKIDFQRLAEIREVV--------DVPLVLHGASDV-PDEFVR 219 (286)
T ss_dssp SSCCHHHHHHHHHHHCCSEEEECSSCC----SSCCSSCCCCCHHHHHHHHHHC--------CSCEEECCCTTC-CHHHHH
T ss_pred cCCCHHHHHHHHHHHCCCEEEeecCcc----ccCcCCCCccCHHHHHHHHHhc--------CCCEEEECCCCC-CHHHHH
Confidence 15677887777534999998864333 2322246778998888887652 345554 5577 778899
Q ss_pred HHHHcCCCEEEEccccc
Q 015424 372 YVQEAGVKAVLVGESIV 388 (407)
Q Consensus 372 ~l~~~GadaVLVGeaLm 388 (407)
++.++|+.-|=|++.+.
T Consensus 220 ~ai~~Gv~KiNi~Tdl~ 236 (286)
T 1gvf_A 220 RTIELGVTKVNVATELK 236 (286)
T ss_dssp HHHHTTEEEEEECHHHH
T ss_pred HHHHCCCeEEEEChHHH
Confidence 99999999999998773
No 272
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=95.01 E-value=0.68 Score=42.28 Aligned_cols=193 Identities=16% Similarity=0.089 Sum_probs=116.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhc--CCCCcEE--eccccCC----HHHHHHHHHcCCCEEEE
Q 015424 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLL--CKEFIVD----AWQIYYARTKGADAVLL 267 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a--~v~lPVL--~KDFIid----~~QI~eAr~~GADaVLL 267 (407)
+.++.+..+...+.|.++|-+....-.+.-+.+++..+|+. ...+.+. .-.+.-. ...+..|..+||..|.+
T Consensus 29 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~ 108 (257)
T 3lmz_A 29 NFDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVG 108 (257)
T ss_dssp TSCHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEe
Confidence 35889999999999999999876521133466666666632 0234433 2111111 12466788999999997
Q ss_pred eccCCCHHHHHHHHHHHHHcCCcEEEEeC--------CHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhH
Q 015424 268 IAAVLPDLDIRYMTKICKLLGLTALVEVH--------DEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNT 339 (407)
Q Consensus 268 iaaiL~~~~L~~Li~~a~~LGL~aLVEVh--------t~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t 339 (407)
... .+.|.++.+.+++.|+...+|.| +.+++.+.++. .-.-+|++- |. ++.. ....|+...
T Consensus 109 ~p~---~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~ll~~-~~p~vg~~~-D~-~h~~-----~~g~d~~~~ 177 (257)
T 3lmz_A 109 VPN---YELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTKD-LDPRIGMCL-DV-GHDL-----RNGCDPVAD 177 (257)
T ss_dssp EEC---GGGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHHHHHHHHTT-SCTTEEEEE-EH-HHHH-----HTTCCHHHH
T ss_pred cCC---HHHHHHHHHHHHHcCCEEEEecCCCcccccCCHHHHHHHHHh-CCCCccEEE-ch-hhHH-----HcCCCHHHH
Confidence 532 46799999999999999999999 46788777764 324677752 32 0000 011233222
Q ss_pred H-HHhhccccccccc-------CCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHh
Q 015424 340 K-KLLEGERGEIIRQ-------KNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITG 399 (407)
Q Consensus 340 ~-~L~~~~~~~~i~~-------~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~ 399 (407)
. .+.+.+..-++.. .....+.+|-|.=.+-++.+.+.|+++.++=|......||.+.+++
T Consensus 178 l~~~~~~i~~vHl~D~~~~~~~~~~~~~G~G~id~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~ 245 (257)
T 3lmz_A 178 LKKYHTRVFDMHIKDVTDSSKAGVGIEIGRGKIDFPALIRMMREVNYTGMCSLEYEKDMKDPFLGIAE 245 (257)
T ss_dssp HHHHGGGEEEEEECEESCSSTTCCEECTTSSSCCHHHHHHHHHHTTCCSEEEECCCSSTTSCHHHHHH
T ss_pred HHHhhcceeEEeecccccccCCCCccccCCCccCHHHHHHHHHHcCCCceEEEEecCCcCCHHHHHHH
Confidence 2 2222211111100 0112344566655666788889999999888877666677665544
No 273
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=94.95 E-value=0.22 Score=48.95 Aligned_cols=147 Identities=18% Similarity=0.139 Sum_probs=93.2
Q ss_pred CCceEEEEecccCCC---cC---CCCCC-CCHHHHHHHHHHcCCcEEEEEe---cCCcCCCCHH----HHHHHHhcCCCC
Q 015424 175 GLPALIAEVKKASPS---RG---ILRED-FDPVEIARSYEKGGAACLSILT---DEKYFKGSFE----NLEAVRSAGVKC 240 (407)
Q Consensus 175 ~~~~vIAEvKraSPS---kG---~i~~~-~dp~~iA~ay~~~GA~aISVLT---d~~~F~Gs~e----dL~~Vr~a~v~l 240 (407)
+++.|+.||--..|- .| ...+. .++.+.|+.+.+.||+.|-|.. +|..+.=+.+ -++.+++. +++
T Consensus 45 ~~p~i~m~I~n~tpdsf~d~i~~~~~~~~~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~-~~v 123 (310)
T 2h9a_B 45 NPPRFALEVFDTPPTDWPDILVEPFKDVINDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADA-IDV 123 (310)
T ss_dssp SCCEEEEEEESSCCSSCCHHHHGGGTTTTTCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHH-CSS
T ss_pred CCCeEEEEEeeCCCcccchhhhhhhccHHHHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHh-CCc
Confidence 456789999999882 33 33333 4899999999999999999985 4554444444 34455565 789
Q ss_pred cEEeccccC---CHHHHHHHHHcCCC--EEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHhcccCCcEEE
Q 015424 241 PLLCKEFIV---DAWQIYYARTKGAD--AVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH-DEREMDRVLGIEGIELIG 314 (407)
Q Consensus 241 PVL~KDFIi---d~~QI~eAr~~GAD--aVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh-t~eElerAl~l~Ga~iIG 314 (407)
||---|-.. ++.-+.+|..+||| .++-.++.. ....+...+.++|..+++-.. |.+.+++..+. +.-.|
T Consensus 124 plsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~---~~~~~~~~aa~~g~~vv~m~~~dv~~l~~~~~~--a~~~G 198 (310)
T 2h9a_B 124 PLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKD---NYKPIVATCMVHGHSVVASAPLDINLSKQLNIM--IMEMN 198 (310)
T ss_dssp CEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTT---THHHHHHHHHHHTCEEEEECSSCHHHHHHHHHH--HHTTT
T ss_pred eEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCC---ccHHHHHHHHHhCCCEEEEChhHHHHHHHHHHH--HHHCC
Confidence 986534211 23345667889998 455555554 346778888999998777544 56666554442 22345
Q ss_pred eec-cccccccccc
Q 015424 315 INN-RNLAISIFSY 327 (407)
Q Consensus 315 INn-RdL~~~~~~~ 327 (407)
|.. +-++.|+.+.
T Consensus 199 i~~e~IilDPg~g~ 212 (310)
T 2h9a_B 199 LAPNRIIMDPLIGA 212 (310)
T ss_dssp CCGGGEEEECCCCC
T ss_pred CChhhEEEeCCCcc
Confidence 532 2334566553
No 274
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=94.93 E-value=2 Score=41.21 Aligned_cols=166 Identities=15% Similarity=0.161 Sum_probs=98.6
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCHHHH-HHHH---h-cCCCCcEEeccccCCHHH----HHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSFENL-EAVR---S-AGVKCPLLCKEFIVDAWQ----IYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~edL-~~Vr---~-a~v~lPVL~KDFIid~~Q----I~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-++. -..++.=+.+.- +.++ + ..-.+||+..=.-.+..+ ...|..+|||+|+++.
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 25 EKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3445667789999998862 112222233332 2222 2 123699997654444443 3457789999999997
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEEe--------CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCch
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVEV--------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
-.. +++.+.. +-..+...++.+++=- =+.+.+.+..+. ..++|| ++-.-|+.
T Consensus 105 P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgi--------------K~ssgd~~ 168 (291)
T 3tak_A 105 PYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEI--PNIVGI--------------KDATGDVP 168 (291)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTTS--TTEEEE--------------EECSCCHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHHcC--CCEEEE--------------EeCCCCHH
Confidence 654 5555444 4455666677775431 144556555554 579999 44455777
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 391 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 391 (407)
...+++... ++++.+. +|- -+.+-....+|++|++-|.+=+-+.
T Consensus 169 ~~~~~~~~~------~~~f~v~--~G~--d~~~~~~l~~G~~G~is~~~n~~P~ 212 (291)
T 3tak_A 169 RGKALIDAL------NGKMAVY--SGD--DETAWELMLLGADGNISVTANIAPK 212 (291)
T ss_dssp HHHHHHHHH------TTSSEEE--ECC--HHHHHHHHHTTCCEEEESGGGTCHH
T ss_pred HHHHHHHHc------CCCeEEE--ECc--HHHHHHHHHCCCCEEEechhhhcHH
Confidence 777776642 2344443 343 2335566789999999887655443
No 275
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=94.91 E-value=0.047 Score=51.70 Aligned_cols=73 Identities=21% Similarity=0.142 Sum_probs=58.2
Q ss_pred CCHHHHHHHHHHcCC-----cEEEEEecCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCCCEEEEecc
Q 015424 197 FDPVEIARSYEKGGA-----ACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA-----~aISVLTd~~~F~Gs~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa 270 (407)
.+| +.++.|.+.|+ .-+=... .--.+..+.++.+++. + ++||.....|.++.|+.++.. |||+|+++.+
T Consensus 146 ~~~-e~~~~~a~~g~~~l~~~~Vyl~~--~G~~~~~~~i~~i~~~-~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa 220 (234)
T 2f6u_A 146 IDK-ELAASYALVGEKLFNLPIIYIEY--SGTYGNPELVAEVKKV-LDKARLFYGGGIDSREKAREMLR-YADTIIVGNV 220 (234)
T ss_dssp CCH-HHHHHHHHHHHHTTCCSEEEEEC--TTSCCCHHHHHHHHHH-CSSSEEEEESCCCSHHHHHHHHH-HSSEEEECHH
T ss_pred CCH-HHHHHHHHhhhhhcCCCEEEEeC--CCCcchHHHHHHHHHh-CCCCCEEEEecCCCHHHHHHHHh-CCCEEEEChH
Confidence 367 88888888876 3222222 2346788999999987 8 999999999999999999888 9999999988
Q ss_pred CCCH
Q 015424 271 VLPD 274 (407)
Q Consensus 271 iL~~ 274 (407)
+..+
T Consensus 221 ~v~~ 224 (234)
T 2f6u_A 221 IYEK 224 (234)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 7643
No 276
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=94.91 E-value=0.039 Score=53.31 Aligned_cols=113 Identities=18% Similarity=0.207 Sum_probs=68.3
Q ss_pred CHHHHHHHHHHcCCcEEEEEe----------------------------cCCc------CCCCHHHHHHHHhcCCCCcEE
Q 015424 198 DPVEIARSYEKGGAACLSILT----------------------------DEKY------FKGSFENLEAVRSAGVKCPLL 243 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLT----------------------------d~~~------F~Gs~edL~~Vr~a~v~lPVL 243 (407)
++.+..++. +.||+.|.+-. -+.. ...+++.+..+++. +++||+
T Consensus 134 ~~~e~~~a~-~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~-~~iPvi 211 (305)
T 2nv1_A 134 DLGEATRRI-AEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKD-GKLPVV 211 (305)
T ss_dssp SHHHHHHHH-HTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHH-TSCSSC
T ss_pred CHHHHHHHH-HCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHh-cCCCEE
Confidence 566766665 78999998821 1111 23567888888886 789998
Q ss_pred --eccccCCHHHHHHHHHcCCCEEEEeccCCCH----HHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeec
Q 015424 244 --CKEFIVDAWQIYYARTKGADAVLLIAAVLPD----LDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINN 317 (407)
Q Consensus 244 --~KDFIid~~QI~eAr~~GADaVLLiaaiL~~----~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINn 317 (407)
.-..|-++.++.++..+|||+|.++.+++.. ..+++|.+..+. ..+.+.+....+.-|..+-|++.
T Consensus 212 ~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~ 283 (305)
T 2nv1_A 212 NFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTH--------FTDYKLIAELSKELGTAMKGIEI 283 (305)
T ss_dssp EEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHT--------TTCHHHHHHHTSCC---------
T ss_pred EEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHHHH--------hcChhhHHHHHHHhhhhhcCCCh
Confidence 7777779999999999999999999998832 234445444332 23455554443333556777766
Q ss_pred ccc
Q 015424 318 RNL 320 (407)
Q Consensus 318 RdL 320 (407)
..|
T Consensus 284 ~~~ 286 (305)
T 2nv1_A 284 SNL 286 (305)
T ss_dssp ---
T ss_pred hhc
Confidence 655
No 277
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=94.88 E-value=0.12 Score=51.72 Aligned_cols=93 Identities=19% Similarity=0.191 Sum_probs=67.1
Q ss_pred cHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCC-cCC---CCHHHHHHHHhcC
Q 015424 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEK-YFK---GSFENLEAVRSAG 237 (407)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~-~F~---Gs~edL~~Vr~a~ 237 (407)
+..+.|++. .+.|.++-++ . + .+.|+..++.||++|.|-.-.. .+. .+++-|..++++
T Consensus 207 ~~i~~lr~~---~~~PvivK~v----~---------~-~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~a- 268 (352)
T 3sgz_A 207 NDLSLLQSI---TRLPIILKGI----L---------T-KEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAA- 268 (352)
T ss_dssp HHHHHHHHH---CCSCEEEEEE----C---------S-HHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHH-
T ss_pred HHHHHHHHh---cCCCEEEEec----C---------c-HHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHH-
Confidence 456666654 2455566555 1 2 3679999999999999842111 111 245677777765
Q ss_pred C--CCcEEeccccCCHHHHHHHHHcCCCEEEEeccCC
Q 015424 238 V--KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 238 v--~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (407)
+ ++||+.-..|.+..++.+|.++|||+|.+...+|
T Consensus 269 v~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l 305 (352)
T 3sgz_A 269 VKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPIL 305 (352)
T ss_dssp HTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred hCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 5 7999999999999999999999999999987655
No 278
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=94.88 E-value=1.5 Score=43.02 Aligned_cols=165 Identities=13% Similarity=0.041 Sum_probs=98.0
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCH-HHHHHHH---hc-CCCCcEEeccccCCHH----HHHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSF-ENLEAVR---SA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~-edL~~Vr---~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-|+. -..++.=+. |..+.++ +. .-.+||+..=.-.+.. +...|..+|||+|++..
T Consensus 58 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 58 SALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAP 137 (332)
T ss_dssp HHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 4556667889999999872 112222233 3333232 21 2369999754434443 23446788999999988
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEE-------e-CCHHHHHHHhcccCCcEEEeeccccccccccccccccccC--
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVE-------V-HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVD-- 335 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVE-------V-ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vD-- 335 (407)
-.. +++.+.. +-..+...++.+++= + =+.+.+.+..+. ..|+|| ++-.-|
T Consensus 138 P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~--pnIvgi--------------Kdssgd~~ 201 (332)
T 2r8w_A 138 VSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAYI--PNIRAI--------------KMPLPADA 201 (332)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHTS--TTEEEE--------------EECCCTTC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcC--CCEEEE--------------EeCCCCch
Confidence 754 5555544 445566677776542 1 145556665554 579999 444456
Q ss_pred --chhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 336 --NSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 336 --l~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
+....+++... ++++.+ . +|- -+.+.....+|++|++-|.+=+-+
T Consensus 202 ~~~~~~~~l~~~~------~~~f~v-~-~G~--D~~~l~~l~~G~~G~is~~anv~P 248 (332)
T 2r8w_A 202 DYAGELARLRPKL------SDDFAI-G-YSG--DWGCTDATLAGGDTWYSVVAGLLP 248 (332)
T ss_dssp CHHHHHHHHTTTS------CTTCEE-E-ECC--HHHHHHHHHTTCSEEEESGGGTCH
T ss_pred hHHHHHHHHHHhc------CCCEEE-E-eCc--hHHHHHHHHCCCCEEEeCHHHhCH
Confidence 67777776541 234333 3 332 234556667899999999766543
No 279
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=94.83 E-value=0.19 Score=50.28 Aligned_cols=105 Identities=19% Similarity=0.240 Sum_probs=76.3
Q ss_pred HHHHHcCCCEEEEecc----------CCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeecccccccc
Q 015424 255 YYARTKGADAVLLIAA----------VLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISI 324 (407)
Q Consensus 255 ~eAr~~GADaVLLiaa----------iL~~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~ 324 (407)
..++++|||++-...- -+..+.|+.|.++++++||.++.|++|.+.++.+.++ ++++-|-.|+.
T Consensus 127 ~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~--vd~lkIgAr~~---- 200 (350)
T 1vr6_A 127 HFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVTEALGEDDLPKVAEY--ADIIQIGARNA---- 200 (350)
T ss_dssp HHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHH--CSEEEECGGGT----
T ss_pred HHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHh--CCEEEECcccc----
Confidence 3355677776544322 1235789999999999999999999999999999886 79999988887
Q ss_pred ccccccccccCchhHHHHhhcccccccccCCceEEEeeCCC-CHHHHHHH----HHcCC-CEEEE
Q 015424 325 FSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLF-TPDDIAYV----QEAGV-KAVLV 383 (407)
Q Consensus 325 ~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~-t~eD~~~l----~~~Ga-daVLV 383 (407)
. |+....++.+ .+.+|+..-|.. |++++... ...|. +-+|+
T Consensus 201 -----~----n~~LL~~va~---------~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLc 247 (350)
T 1vr6_A 201 -----Q----NFRLLSKAGS---------YNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILC 247 (350)
T ss_dssp -----T----CHHHHHHHHT---------TCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred -----c----CHHHHHHHHc---------cCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEE
Confidence 3 3333444442 357899999998 99988654 45687 44454
No 280
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=94.82 E-value=0.77 Score=40.81 Aligned_cols=103 Identities=13% Similarity=0.218 Sum_probs=64.6
Q ss_pred HHHHHHHHcCCCEEEEeccCCCHHHHHHHH----HHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccc
Q 015424 252 WQIYYARTKGADAVLLIAAVLPDLDIRYMT----KICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSY 327 (407)
Q Consensus 252 ~QI~eAr~~GADaVLLiaaiL~~~~L~~Li----~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~ 327 (407)
.++..+...|+|+|.+...-.+..++.+++ +.+...|..+++. +.++.+.++ |++.|=+...++
T Consensus 30 ~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~----~~~~~a~~~-gad~v~l~~~~~------- 97 (215)
T 1xi3_A 30 ESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYDALFFVD----DRVDVALAV-DADGVQLGPEDM------- 97 (215)
T ss_dssp HHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTTCEEEEE----SCHHHHHHH-TCSEEEECTTSC-------
T ss_pred HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcCCeEEEc----ChHHHHHHc-CCCEEEECCccC-------
Confidence 356667889999999876555554444433 3344567777775 445667776 888885543333
Q ss_pred cccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcc
Q 015424 328 RTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGE 385 (407)
Q Consensus 328 t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGe 385 (407)
+.....++. .++.+.. .++|++++..+.+.|+|.++++.
T Consensus 98 -------~~~~~~~~~----------~~~~~~v--~~~t~~e~~~~~~~g~d~i~~~~ 136 (215)
T 1xi3_A 98 -------PIEVAKEIA----------PNLIIGA--SVYSLEEALEAEKKGADYLGAGS 136 (215)
T ss_dssp -------CHHHHHHHC----------TTSEEEE--EESSHHHHHHHHHHTCSEEEEEC
T ss_pred -------CHHHHHHhC----------CCCEEEE--ecCCHHHHHHHHhcCCCEEEEcC
Confidence 222333331 1222211 24799999999999999999865
No 281
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=94.79 E-value=0.11 Score=60.53 Aligned_cols=114 Identities=13% Similarity=0.019 Sum_probs=71.8
Q ss_pred CCCHHHHHHHHHHHHHc--CCcEEEEeC----CHHHHHHHhcccCCcEEEeeccccccccccccccccc--cCchhHHHH
Q 015424 271 VLPDLDIRYMTKICKLL--GLTALVEVH----DEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFE--VDNSNTKKL 342 (407)
Q Consensus 271 iL~~~~L~~Li~~a~~L--GL~aLVEVh----t~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~--vDl~~t~~L 342 (407)
+.+.+++.++++..++. +..++|-+- ...++..+.++ |+|.|-|.+.+- +++ .+..+.. .-+.+..-|
T Consensus 974 ~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~A-GAD~IvVsG~eG-GTg--asp~~~~~~~G~Pt~~aL 1049 (1479)
T 1ea0_A 974 IYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKA-NADIILISGNSG-GTG--ASPQTSIKFAGLPWEMGL 1049 (1479)
T ss_dssp CSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHT-TCSEEEEECTTC-CCS--SEETTHHHHSCCCHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHc-CCcEEEEcCCCC-CCC--CCchhhhcCCchhHHHHH
Confidence 34556777888877775 555544432 36677788887 999999977652 221 1111110 011111111
Q ss_pred ---hhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 343 ---LEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 343 ---~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
...++...+ ..++++|+.|||.|..|+.++..+||++|-+|+++|.
T Consensus 1050 ~ev~~al~~~gl-r~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~ 1098 (1479)
T 1ea0_A 1050 SEVHQVLTLNRL-RHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLI 1098 (1479)
T ss_dssp HHHHHHHHTTTC-TTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHH
T ss_pred HHHHHHHHHcCC-CCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHH
Confidence 111111111 1368999999999999999999999999999999865
No 282
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=94.79 E-value=0.032 Score=55.76 Aligned_cols=81 Identities=15% Similarity=0.120 Sum_probs=59.0
Q ss_pred CCCCCCHHHH---HHHHHHcC-CcEEEEE--------ec----------CCcCCC---------CHHHHHHHHhcCCCCc
Q 015424 193 LREDFDPVEI---ARSYEKGG-AACLSIL--------TD----------EKYFKG---------SFENLEAVRSAGVKCP 241 (407)
Q Consensus 193 i~~~~dp~~i---A~ay~~~G-A~aISVL--------Td----------~~~F~G---------s~edL~~Vr~a~v~lP 241 (407)
|++++|..++ |+.+.++| |++|.+. .| ...++| +++.+..+++...++|
T Consensus 200 i~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ip 279 (354)
T 4ef8_A 200 MPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKL 279 (354)
T ss_dssp ECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSE
T ss_pred ecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCC
Confidence 3444566555 45555887 9999861 11 123444 4677888887623799
Q ss_pred EEeccccCCHHHHHHHHHcCCCEEEEeccCCC
Q 015424 242 LLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (407)
Q Consensus 242 VL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (407)
|+.-..|.+..++.++..+|||+|.+...++.
T Consensus 280 II~~GGI~s~~da~~~l~aGAd~V~vgra~l~ 311 (354)
T 4ef8_A 280 IFGCGGVYTGEDAFLHVLAGASMVQVGTALQE 311 (354)
T ss_dssp EEEESCCCSHHHHHHHHHHTEEEEEECHHHHH
T ss_pred EEEECCcCCHHHHHHHHHcCCCEEEEhHHHHH
Confidence 99999999999999999999999999887774
No 283
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=94.65 E-value=1.8 Score=41.72 Aligned_cols=164 Identities=15% Similarity=0.091 Sum_probs=98.8
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCH-HHHHHHH---hc-CCCCcEEeccccCCHHH----HHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSF-ENLEAVR---SA-GVKCPLLCKEFIVDAWQ----IYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~-edL~~Vr---~a-~v~lPVL~KDFIid~~Q----I~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-++. -..++.=|. |..+.++ +. .-.+||+..=.-.+..+ ...|..+|||+|++..
T Consensus 24 ~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 24 AGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3556667899999998872 122222233 3333222 21 23699997654444442 3446788999999988
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEEe--------CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCch
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVEV--------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
-.. +++.+.. +-..+...++.+++=- =+.+.+.+..+. ..++|| ++-.-|+.
T Consensus 104 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgi--------------Kds~gd~~ 167 (297)
T 2rfg_A 104 GYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAAL--PRIVGV--------------KDATTDLA 167 (297)
T ss_dssp CTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTS--TTEEEE--------------EECSCCTT
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcC--CCEEEE--------------EeCCCCHH
Confidence 754 5555544 4455666777765421 145566665554 579999 44455777
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
...+++... ++++.+ -+|-. +.+.....+|++|++-|.+=+-
T Consensus 168 ~~~~~~~~~------~~~f~v--~~G~d--~~~l~~l~~G~~G~is~~an~~ 209 (297)
T 2rfg_A 168 RISRERMLI------NKPFSF--LSGDD--MTAIAYNASGGQGCISVSANIA 209 (297)
T ss_dssp HHHHHHTTC------CSCCEE--EESCG--GGHHHHHHTTCCEEEESGGGTC
T ss_pred HHHHHHHhc------CCCEEE--EeCcH--HHHHHHHHCCCCEEEecHHHhh
Confidence 777777542 234334 34442 2244566799999999987554
No 284
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=94.65 E-value=0.21 Score=47.98 Aligned_cols=150 Identities=16% Similarity=0.162 Sum_probs=85.6
Q ss_pred CCCCHHHHHHHHhcCCCCcEE----eccccCC-HHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHc---C-----C
Q 015424 223 FKGSFENLEAVRSAGVKCPLL----CKEFIVD-AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLL---G-----L 289 (407)
Q Consensus 223 F~Gs~edL~~Vr~a~v~lPVL----~KDFIid-~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~L---G-----L 289 (407)
...+++-++.+++. +.+|+ .-|.--. ...+..+..+|||.|.+.+ ....+-++.+++.+++. | +
T Consensus 42 ~~~G~~~v~~Lk~~--g~~VflDlK~~DIpnTv~~a~~~~~~~gad~vTVh~-~~G~~~~~aa~~~~~~~~~~g~~~~~l 118 (259)
T 3tfx_A 42 YNAGIDVIKKLTQQ--GYKIFLDLKMHDIPNTVYNGAKALAKLGITFTTVHA-LGGSQMIKSAKDGLIAGTPAGHSVPKL 118 (259)
T ss_dssp HHHCHHHHHHHHHT--TCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEG-GGCHHHHHHHHHHHHHHSCTTSCCCEE
T ss_pred HhcCHHHHHHHHHC--CCcEEEEecccccchHHHHHHHHHHhcCCCEEEEcC-CCCHHHHHHHHHHHHHhcccCCCCceE
Confidence 33457778888874 67877 3453221 2345556778999999854 45566777788877653 3 2
Q ss_pred cEEEEeCCH--HHHHH---------------H---hcccCCcEEEeeccccccccccccccccccCchhHHHHhhccccc
Q 015424 290 TALVEVHDE--REMDR---------------V---LGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGE 349 (407)
Q Consensus 290 ~aLVEVht~--eEler---------------A---l~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~ 349 (407)
-++.+..+. ++++. | .++ |.+ |+ -........+.+.
T Consensus 119 i~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~-G~d--Gv-----------------V~s~~e~~~ir~~---- 174 (259)
T 3tfx_A 119 LAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHS-GAD--GV-----------------ICSPLEVKKLHEN---- 174 (259)
T ss_dssp EEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHT-TCC--EE-----------------ECCGGGHHHHHHH----
T ss_pred EEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHh-CCC--EE-----------------EECHHHHHHHHhh----
Confidence 222233332 33321 1 111 211 11 1112222333332
Q ss_pred ccccCCceEEEeeCCCCH----HH------HHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 350 IIRQKNIIVVGESGLFTP----DD------IAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 350 ~i~~~~v~vVAESGI~t~----eD------~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
.+++ .++.-.||.-. .| +..+.++|+|-++||++|++++||.++++++..
T Consensus 175 --~~~~-f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~ 234 (259)
T 3tfx_A 175 --IGDD-FLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASDPKAAYEAIKK 234 (259)
T ss_dssp --HCSS-SEEEECCCCCC-----------CHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred --cCCc-cEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHH
Confidence 1233 33445677432 22 667789999999999999999999999888754
No 285
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=94.62 E-value=0.077 Score=52.87 Aligned_cols=78 Identities=19% Similarity=0.083 Sum_probs=61.3
Q ss_pred CHHHHHHHHHHcCCcEEEEEec--CCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCCCH
Q 015424 198 DPVEIARSYEKGGAACLSILTD--EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD 274 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd--~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~ 274 (407)
+..++|+.+++.|++.|+|-.- ........+.+..||+. +++||+.-..| ++.+..++...| ||.|.+.-.++.+
T Consensus 252 ~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~-~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~~ 329 (364)
T 1vyr_A 252 DALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRER-FHGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIAN 329 (364)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHH-CCCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHHhC
Confidence 3566899999999999999641 11122356778889987 89999987766 899999999998 9999998888866
Q ss_pred HHH
Q 015424 275 LDI 277 (407)
Q Consensus 275 ~~L 277 (407)
.++
T Consensus 330 P~~ 332 (364)
T 1vyr_A 330 PDL 332 (364)
T ss_dssp TTH
T ss_pred hhH
Confidence 555
No 286
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=94.60 E-value=2.1 Score=41.40 Aligned_cols=165 Identities=14% Similarity=0.064 Sum_probs=97.9
Q ss_pred HHHHHHHHcCCcEEEEEe-cCCcCCCCH-HHHHHH---Hhc-CCCCcEEeccccCCHHH----HHHHHHcCCCEEEEecc
Q 015424 201 EIARSYEKGGAACLSILT-DEKYFKGSF-ENLEAV---RSA-GVKCPLLCKEFIVDAWQ----IYYARTKGADAVLLIAA 270 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVLT-d~~~F~Gs~-edL~~V---r~a-~v~lPVL~KDFIid~~Q----I~eAr~~GADaVLLiaa 270 (407)
++++.+.+.|+++|-|+- =..++.=|. |..+.+ ++. .-.+||+..=.-.+..+ ...|..+|||+|+++.-
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 118 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTP 118 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 345667789999998872 112222233 333333 332 23689997543344442 34567899999999876
Q ss_pred CC-----CHHHHHH-HHHHHHHcCCcEEEEe--------CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCc
Q 015424 271 VL-----PDLDIRY-MTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDN 336 (407)
Q Consensus 271 iL-----~~~~L~~-Li~~a~~LGL~aLVEV--------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl 336 (407)
.. +++.+.. +...+...++.+++=- =+.+.+.+..+. ..++|| ++-.-|+
T Consensus 119 ~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgi--------------Kdssgd~ 182 (307)
T 3s5o_A 119 CYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQH--PNIVGM--------------XDSGGDV 182 (307)
T ss_dssp CTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTS--TTEEEE--------------EECSCCH
T ss_pred CcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhcC--CCEEEE--------------EcCCCCH
Confidence 43 5555444 4455666677664421 145556665554 579999 4445677
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
....+++... .++++.+ -+|-.+ .+.....+|++|++-|.+=+-+
T Consensus 183 ~~~~~~~~~~-----~~~~f~v--~~G~d~--~~l~~l~~G~~G~is~~an~~P 227 (307)
T 3s5o_A 183 TRIGLIVHKT-----RKQDFQV--LAGSAG--FLMASYALGAVGGVCALANVLG 227 (307)
T ss_dssp HHHHHHHHHT-----TTSSCEE--EESSGG--GHHHHHHHTCCEEECGGGGTCH
T ss_pred HHHHHHHHhc-----cCCCeEE--EeCcHH--HHHHHHHcCCCEEEechhhhhH
Confidence 7777776542 1234343 355533 3556678999999988775543
No 287
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=94.58 E-value=0.074 Score=51.63 Aligned_cols=94 Identities=19% Similarity=0.159 Sum_probs=67.2
Q ss_pred ccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEec-CCcCC-----CCHHHHHHHH
Q 015424 161 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTD-EKYFK-----GSFENLEAVR 234 (407)
Q Consensus 161 ~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd-~~~F~-----Gs~edL~~Vr 234 (407)
.++...+++. + ..+|..+ . ++ +.|+.+.+.||++|.+-.- ..... .+++.+..++
T Consensus 108 ~~~~~~l~~~----g-i~vi~~v--~-----------t~-~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~ 168 (328)
T 2gjl_A 108 GEHIAEFRRH----G-VKVIHKC--T-----------AV-RHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAA 168 (328)
T ss_dssp HHHHHHHHHT----T-CEEEEEE--S-----------SH-HHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHc----C-CCEEeeC--C-----------CH-HHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHH
Confidence 5677777653 2 4566433 1 22 4567778889999997431 11111 3457788888
Q ss_pred hcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCH
Q 015424 235 SAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (407)
Q Consensus 235 ~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~ 274 (407)
+. +++||+.-..|.++.++.++..+|||+|.+..+++..
T Consensus 169 ~~-~~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~ 207 (328)
T 2gjl_A 169 NR-LRVPIIASGGFADGRGLVAALALGADAINMGTRFLAT 207 (328)
T ss_dssp TT-CCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTS
T ss_pred Hh-cCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcC
Confidence 76 7999999988889999999999999999999887743
No 288
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=94.57 E-value=0.092 Score=51.47 Aligned_cols=73 Identities=19% Similarity=0.182 Sum_probs=55.8
Q ss_pred HHHHHHHHHcCCcEEEEE-e-----------cCC-----cCCC---CHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHH
Q 015424 200 VEIARSYEKGGAACLSIL-T-----------DEK-----YFKG---SFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYAR 258 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVL-T-----------d~~-----~F~G---s~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr 258 (407)
.+.|+.+.+.||++|.|- + .+. +..+ +.+.|..+++. + ++||+.-..|.++.++.++.
T Consensus 192 ~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~-~~~ipvia~GGI~~~~d~~k~l 270 (349)
T 1p0k_A 192 KASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSE-FPASTMIASGGLQDALDVAKAI 270 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHH-CTTSEEEEESSCCSHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHh-cCCCeEEEECCCCCHHHHHHHH
Confidence 467889999999999984 1 110 0122 45567777765 4 89999999999999999999
Q ss_pred HcCCCEEEEeccCCC
Q 015424 259 TKGADAVLLIAAVLP 273 (407)
Q Consensus 259 ~~GADaVLLiaaiL~ 273 (407)
.+|||+|.+...++.
T Consensus 271 ~~GAd~V~iG~~~l~ 285 (349)
T 1p0k_A 271 ALGASCTGMAGHFLK 285 (349)
T ss_dssp HTTCSEEEECHHHHH
T ss_pred HcCCCEEEEcHHHHH
Confidence 999999999877663
No 289
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=94.57 E-value=0.068 Score=54.46 Aligned_cols=50 Identities=16% Similarity=0.205 Sum_probs=43.7
Q ss_pred CceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhcCcc
Q 015424 355 NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFGKDI 405 (407)
Q Consensus 355 ~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~~~~ 405 (407)
++++|+-|||.|++++.++.+. ||.|.+|.+++..||...++++=...+|
T Consensus 318 ~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~IanPdlv~ki~~G~~~~I 367 (419)
T 3l5a_A 318 RIPLIASGGINSPESALDALQH-ADMVGMSSPFVTEPDFVHKLAEQRPHDI 367 (419)
T ss_dssp SSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHHCTTHHHHHHTTCGGGC
T ss_pred CCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHHCcHHHHHHHcCCcccc
Confidence 5789999999999999999999 9999999999999998888876544443
No 290
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=94.56 E-value=1.6 Score=42.57 Aligned_cols=165 Identities=13% Similarity=0.056 Sum_probs=97.0
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCHH-HHHHHH---hc-CCCCcEEeccccCCHH----HHHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSFE-NLEAVR---SA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~e-dL~~Vr---~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-|+. -.+++.=+.+ ..+.++ +. .-.+||+..=.-.+.. +...|..+|||+|+++.
T Consensus 48 ~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 48 GRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3455667889999998872 1122222333 223222 21 2369999754434443 23456789999999987
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEEe--------CCHHHHHHH-hcccCCcEEEeeccccccccccccccccccCc
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVEV--------HDEREMDRV-LGIEGIELIGINNRNLAISIFSYRTETFEVDN 336 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVEV--------ht~eElerA-l~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl 336 (407)
-.. +++.+.. +-..+...++.+++=- =+.+-+.+. .+. ..++|| ++-.-|+
T Consensus 128 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~--pnIvgi--------------Kdssgd~ 191 (315)
T 3na8_A 128 ISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREV--DNVTMV--------------KESTGDI 191 (315)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHS--TTEEEE--------------EECSSCH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcC--CCEEEE--------------ECCCCCH
Confidence 653 5555444 4455666677664321 134555554 443 479999 4445577
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
....+++... ++++.+.+ |-.. .+.....+|++|++-|.+=+-+
T Consensus 192 ~~~~~~~~~~------~~~f~v~~--G~D~--~~l~~l~~G~~G~is~~an~~P 235 (315)
T 3na8_A 192 QRMHKLRLLG------EGRVPFYN--GCNP--LALEAFVAGAKGWCSAAPNLIP 235 (315)
T ss_dssp HHHHHHHHHT------TTCSCEEE--CCGG--GHHHHHHHTCSEEEESGGGTCH
T ss_pred HHHHHHHHHc------CCCEEEEe--CchH--HHHHHHHCCCCEEEechhhhCH
Confidence 7777777642 23444433 4322 2445567899999998875543
No 291
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=94.56 E-value=0.1 Score=52.47 Aligned_cols=44 Identities=14% Similarity=0.139 Sum_probs=40.4
Q ss_pred CceEEEeeCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHh
Q 015424 355 NIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITG 399 (407)
Q Consensus 355 ~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~ 399 (407)
++++|+-||| |++++..+.+.| ||.|.+|.+++..++....+++
T Consensus 307 ~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~ 351 (379)
T 3aty_A 307 SGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQ 351 (379)
T ss_dssp CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred CCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHhCcHHHHHHHc
Confidence 5789999999 999999999998 9999999999999998887764
No 292
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=94.55 E-value=2 Score=41.17 Aligned_cols=164 Identities=10% Similarity=0.065 Sum_probs=98.7
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCH-HHHHHHH---hc-CCCCcEEeccccCCHHH----HHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSF-ENLEAVR---SA-GVKCPLLCKEFIVDAWQ----IYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~-edL~~Vr---~a-~v~lPVL~KDFIid~~Q----I~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-++. -..++.=|. |..+.++ +. .-.+||+..=.-.+..+ ...|..+|||+|++..
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 24 GNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVV 103 (294)
T ss_dssp HHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3556667889999998872 112222233 3333232 21 23699997655445442 3446788999999988
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEEe--------CCHHHHHHHh-cccCCcEEEeeccccccccccccccccccCc
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVEV--------HDEREMDRVL-GIEGIELIGINNRNLAISIFSYRTETFEVDN 336 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVEV--------ht~eElerAl-~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl 336 (407)
-.. +++.+.. +...+...++.+++=- =+.+.+.+.. +. ..++|| ++-.-|+
T Consensus 104 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pnivgi--------------Kds~gd~ 167 (294)
T 2ehh_A 104 PYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASEC--ENIVAS--------------KESTPNM 167 (294)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHC--TTEEEE--------------EECCSCH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhC--CCEEEE--------------EeCCCCH
Confidence 754 5555544 4455666777765521 1556666655 44 479999 4445677
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
....+++... ++++.+ -+|-. +.+.....+|++|++-|.+=+-
T Consensus 168 ~~~~~~~~~~------~~~f~v--~~G~d--~~~~~~l~~G~~G~is~~an~~ 210 (294)
T 2ehh_A 168 DRISEIVKRL------GESFSV--LSGDD--SLTLPMMALGAKGVISVANNVM 210 (294)
T ss_dssp HHHHHHHHHH------CTTSEE--EESSG--GGHHHHHHTTCCEEEESGGGTC
T ss_pred HHHHHHHHhc------CCCeEE--EECcH--HHHHHHHHCCCCEEEeCHHHhh
Confidence 7777776542 234444 34442 2244566799999999987553
No 293
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=94.53 E-value=0.074 Score=49.88 Aligned_cols=88 Identities=22% Similarity=0.266 Sum_probs=63.1
Q ss_pred ceEEEEecccCCCcCC-CCCCCCH---HHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCC--
Q 015424 177 PALIAEVKKASPSRGI-LREDFDP---VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVD-- 250 (407)
Q Consensus 177 ~~vIAEvKraSPSkG~-i~~~~dp---~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid-- 250 (407)
..+|+|+- |. |. +....++ .+.++.+.+.||+.|-+- +.++++.++.+++. +++||+.-..|-.
T Consensus 146 ~~viv~~~---~~-G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~-----~~~~~~~l~~i~~~-~~ipvva~GGi~~~~ 215 (273)
T 2qjg_A 146 MPLIAMMY---PR-GKHIQNERDPELVAHAARLGAELGADIVKTS-----YTGDIDSFRDVVKG-CPAPVVVAGGPKTNT 215 (273)
T ss_dssp CCEEEEEE---EC-STTCSCTTCHHHHHHHHHHHHHTTCSEEEEC-----CCSSHHHHHHHHHH-CSSCEEEECCSCCSS
T ss_pred CCEEEEeC---CC-CcccCCCCCHhHHHHHHHHHHHcCCCEEEEC-----CCCCHHHHHHHHHh-CCCCEEEEeCCCCCC
Confidence 44677763 32 43 2222333 555688899999988874 35789999999986 7999998777763
Q ss_pred HHH----HHHHHHcCCCEEEEeccCCCH
Q 015424 251 AWQ----IYYARTKGADAVLLIAAVLPD 274 (407)
Q Consensus 251 ~~Q----I~eAr~~GADaVLLiaaiL~~ 274 (407)
+.+ +.++..+|||+|..+..++..
T Consensus 216 ~~~~~~~~~~~~~~Ga~gv~vg~~i~~~ 243 (273)
T 2qjg_A 216 DEEFLQMIKDAMEAGAAGVAVGRNIFQH 243 (273)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCHHHHTS
T ss_pred HHHHHHHHHHHHHcCCcEEEeeHHhhCC
Confidence 545 777778999999998887743
No 294
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=94.52 E-value=0.15 Score=48.68 Aligned_cols=199 Identities=12% Similarity=0.020 Sum_probs=114.5
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCC-cEEEEEecCCcCCCCHHHHHHHHhcC--CCCcEEeccccCCHH
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGA-ACLSILTDEKYFKGSFENLEAVRSAG--VKCPLLCKEFIVDAW 252 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA-~aISVLTd~~~F~Gs~edL~~Vr~a~--v~lPVL~KDFIid~~ 252 (407)
++-|++..|=. -+ .....++++.+...-. ..+-|+.-|. +-+|..+++.. .++.|=..|.=-. .
T Consensus 6 k~~i~gNWKmn-~~------~~~~~~l~~~l~~~~~~~~vev~v~Pp-----~~~L~~v~~~~~~~~i~vgAQn~~~~-~ 72 (244)
T 2v5b_A 6 QPIAAANWKCN-GS------ESLLVPLIETLNAATFDHDVQCVVAPT-----FLHIPMTKARLTNPKFQIAAQNAGNA-D 72 (244)
T ss_dssp CCEEEEEECC------------CCHHHHHHHHHCCCCSCCEEEEEEC-----GGGHHHHHHHCCCTTEEEEESCCCCH-H
T ss_pred CcEEEEECCcc-cC------HHHHHHHHHHHHhhccccCceEEEeCc-----HHHHHHHHHHhcCCCceEEeccCCCC-C
Confidence 45677777754 11 2245567777755211 2234444443 66888887641 2455667773221 1
Q ss_pred HHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCC-HHH-------------HHHHhcccCC--
Q 015424 253 QIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHD-ERE-------------MDRVLGIEGI-- 310 (407)
Q Consensus 253 QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht-~eE-------------lerAl~l~Ga-- 310 (407)
.....+.+||+.|+|+++ .+ +++.+..=++.|.+.||.++++|-. ++| ++.++..-++
T Consensus 73 ~~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleereag~t~~vv~~Ql~~~l~~~~~~~ 152 (244)
T 2v5b_A 73 ALASLKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEA 152 (244)
T ss_dssp HHHHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCTGG
T ss_pred CHHHHHHcCCCEEEeCchhhhhccCCCHHHHHHHHHHHHHCCCeEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHH
Confidence 244467899999999998 22 4444555577888999999999984 443 2334431122
Q ss_pred ---cEEEeeccccccccccccccccccCchhHHHHhhcccc---ccc---ccCCceEEEeeCCCCHHHHHHHHHc-CCCE
Q 015424 311 ---ELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERG---EII---RQKNIIVVGESGLFTPDDIAYVQEA-GVKA 380 (407)
Q Consensus 311 ---~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~---~~i---~~~~v~vVAESGI~t~eD~~~l~~~-Gada 380 (407)
.+|....-=.||||..- +.+...+....+|. ..+ ....+.++..|++ +++.+..+... .+||
T Consensus 153 ~~~~vIAYEPvWAIGTG~~A-------tpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV-~~~N~~~l~~~~diDG 224 (244)
T 2v5b_A 153 WSRVVIAYEPVWAIGTGKVA-------TPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSV-TAKNARTLYQMRDING 224 (244)
T ss_dssp GGGEEEEECCHHHHSSSCCC-------CHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCC-CHHHHHHHHTSTTCCE
T ss_pred cCCEEEEECCHHHhCCCCCC-------CHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCC-CHhHHHHHhcCCCCCe
Confidence 36776665555555322 22222222222211 000 0123567777777 88888887754 7999
Q ss_pred EEEcccccCCCChHHH
Q 015424 381 VLVGESIVKQDDPGKG 396 (407)
Q Consensus 381 VLVGeaLmk~~dp~~~ 396 (407)
+|||.+=.+ ++-.+-
T Consensus 225 ~LVGgASL~-~~F~~I 239 (244)
T 2v5b_A 225 FLVGGASLK-PEFVEI 239 (244)
T ss_dssp EEESGGGSS-TTHHHH
T ss_pred eeechHHHH-HHHHHH
Confidence 999999888 664433
No 295
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=94.50 E-value=0.13 Score=48.33 Aligned_cols=61 Identities=20% Similarity=0.280 Sum_probs=48.8
Q ss_pred cCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 334 VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 334 vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
.+++...++.+. ..+++-..|||++.+|++++.++||+-|+||++.++.++.-..+.+.++
T Consensus 62 ~~~~~i~~i~~~--------~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g 122 (243)
T 4gj1_A 62 RQFALIEKLAKE--------VSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFG 122 (243)
T ss_dssp CCHHHHHHHHHH--------CCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHh--------cCCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCchHHHHHhccc
Confidence 455556666654 3568889999999999999999999999999999998887655555554
No 296
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=94.42 E-value=0.11 Score=48.70 Aligned_cols=73 Identities=14% Similarity=0.130 Sum_probs=51.3
Q ss_pred HHHHHHHHHHcCCcEEEEEecCCcCCC-------CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccC
Q 015424 199 PVEIARSYEKGGAACLSILTDEKYFKG-------SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (407)
Q Consensus 199 p~~iA~ay~~~GA~aISVLTd~~~F~G-------s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (407)
+.+..+.+.+.+...+-+.+-.++.+. ..+.++.+|+. +++||+....|-++.++.++..+|||+|.++.++
T Consensus 155 ~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~-~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai 233 (262)
T 1rd5_A 155 PEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKV-TNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAM 233 (262)
T ss_dssp CHHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred CHHHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhh-cCCeEEEECCcCCHHHHHHHHHcCCCEEEEChHH
Confidence 344555555555556666654332221 23467788876 7999999666666999999999999999999886
Q ss_pred C
Q 015424 272 L 272 (407)
Q Consensus 272 L 272 (407)
.
T Consensus 234 ~ 234 (262)
T 1rd5_A 234 V 234 (262)
T ss_dssp H
T ss_pred H
Confidence 6
No 297
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=94.41 E-value=0.07 Score=59.75 Aligned_cols=75 Identities=25% Similarity=0.257 Sum_probs=60.6
Q ss_pred CHHHHHHHHHHcCCcEEEEE-e-----------------------cCCcCCCC------HHHHHHHHhcCC-CCcEEecc
Q 015424 198 DPVEIARSYEKGGAACLSIL-T-----------------------DEKYFKGS------FENLEAVRSAGV-KCPLLCKE 246 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVL-T-----------------------d~~~F~Gs------~edL~~Vr~a~v-~lPVL~KD 246 (407)
|..++|+.++++||++|++. | ....+.|. ++.+..+++. + ++||+.-.
T Consensus 716 ~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~-~~~ipvi~~G 794 (1025)
T 1gte_A 716 DIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARA-LPGFPILATG 794 (1025)
T ss_dssp CHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHH-STTCCEEEES
T ss_pred HHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHH-cCCCCEEEec
Confidence 78999999999999999992 1 11112222 3568888876 6 89999999
Q ss_pred ccCCHHHHHHHHHcCCCEEEEeccCCC
Q 015424 247 FIVDAWQIYYARTKGADAVLLIAAVLP 273 (407)
Q Consensus 247 FIid~~QI~eAr~~GADaVLLiaaiL~ 273 (407)
.|.+..++.++..+|||+|.+..+++.
T Consensus 795 GI~s~~da~~~l~~Ga~~v~vg~~~l~ 821 (1025)
T 1gte_A 795 GIDSAESGLQFLHSGASVLQVCSAVQN 821 (1025)
T ss_dssp SCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred CcCCHHHHHHHHHcCCCEEEEeecccc
Confidence 999999999999999999999888773
No 298
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=94.39 E-value=0.066 Score=52.98 Aligned_cols=73 Identities=32% Similarity=0.298 Sum_probs=56.8
Q ss_pred HHHHHHHHcCCcEEEEEe-cC----CcC----------CCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEE
Q 015424 201 EIARSYEKGGAACLSILT-DE----KYF----------KGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAV 265 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVLT-d~----~~F----------~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaV 265 (407)
+.|+.+++.|+++|.|-. +. ..| .+.++.+..+++. +++||+.-..|.++..+.++..+|||+|
T Consensus 156 ~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~-~~iPViaaGGI~~~~~~~~~l~~GAd~V 234 (369)
T 3bw2_A 156 EEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREA-VDIPVVAAGGIMRGGQIAAVLAAGADAA 234 (369)
T ss_dssp HHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHH-CSSCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHh-cCceEEEECCCCCHHHHHHHHHcCCCEE
Confidence 357788889999999832 11 111 2337778888876 7999999888889999999999999999
Q ss_pred EEeccCCCH
Q 015424 266 LLIAAVLPD 274 (407)
Q Consensus 266 LLiaaiL~~ 274 (407)
.++..++..
T Consensus 235 ~vGs~~~~~ 243 (369)
T 3bw2_A 235 QLGTAFLAT 243 (369)
T ss_dssp EESHHHHTS
T ss_pred EEChHHhCC
Confidence 999887743
No 299
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=94.38 E-value=1.3 Score=44.74 Aligned_cols=187 Identities=13% Similarity=0.074 Sum_probs=113.3
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEec-------CCc--CCC--------------------C
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTD-------EKY--FKG--------------------S 226 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd-------~~~--F~G--------------------s 226 (407)
.+.||||+=-. ..|.+ .-..+++.+..++||+|+---|- +.. |++ .
T Consensus 28 ~~~IIAEiG~N--H~Gsl---e~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~ 102 (385)
T 1vli_A 28 PVFIIAEAGIN--HDGKL---DQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEW 102 (385)
T ss_dssp CCEEEEEEETT--TTTCH---HHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGG
T ss_pred CcEEEEeecCc--ccccH---HHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHH
Confidence 57899999221 11221 14567788889999999976321 111 541 2
Q ss_pred HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC--CHHHHHHH
Q 015424 227 FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH--DEREMDRV 304 (407)
Q Consensus 227 ~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh--t~eElerA 304 (407)
+..|...++. ..+|+++-= .|+.++.....+|+|++=+.+.-+.+-.| ++.+-+.|..+++-.. |.+|++.|
T Consensus 103 ~~~L~~~~~~-~Gi~~~stp--fD~~svd~l~~~~vd~~KIgS~~~~N~pL---L~~va~~gKPViLStGmaTl~Ei~~A 176 (385)
T 1vli_A 103 ILPLLDYCRE-KQVIFLSTV--CDEGSADLLQSTSPSAFKIASYEINHLPL---LKYVARLNRPMIFSTAGAEISDVHEA 176 (385)
T ss_dssp HHHHHHHHHH-TTCEEECBC--CSHHHHHHHHTTCCSCEEECGGGTTCHHH---HHHHHTTCSCEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHHH-cCCcEEEcc--CCHHHHHHHHhcCCCEEEECcccccCHHH---HHHHHhcCCeEEEECCCCCHHHHHHH
Confidence 3444444454 678888654 67888988888999999999998877544 4555566777777654 88998887
Q ss_pred hcc---cCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCC-HHHHHHHHHcCCCE
Q 015424 305 LGI---EGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFT-PDDIAYVQEAGVKA 380 (407)
Q Consensus 305 l~l---~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t-~eD~~~l~~~Gada 380 (407)
++. .|..-|-+-.+ ...|++....+|+.....|.+.. .+++|...+--.. ..-......+||+
T Consensus 177 ve~i~~~Gn~~iiLlhc-----~s~YPtp~~~~nL~aI~~Lk~~f-------~~lpVG~SdHt~G~~~~~~AAvAlGA~- 243 (385)
T 1vli_A 177 WRTIRAEGNNQIAIMHC-----VAKYPAPPEYSNLSVIPMLAAAF-------PEAVIGFSDHSEHPTEAPCAAVRLGAK- 243 (385)
T ss_dssp HHHHHTTTCCCEEEEEE-----CSSSSCCGGGCCTTHHHHHHHHS-------TTSEEEEEECCSSSSHHHHHHHHTTCS-
T ss_pred HHHHHHCCCCcEEEEec-----cCCCCCChhhcCHHHHHHHHHHc-------CCCCEEeCCCCCCchHHHHHHHHcCCC-
Confidence 653 25422222222 12344444568888877765541 1455555443333 4445555689999
Q ss_pred EEEcccc
Q 015424 381 VLVGESI 387 (407)
Q Consensus 381 VLVGeaL 387 (407)
+|=.-+
T Consensus 244 -iIEkHf 249 (385)
T 1vli_A 244 -LIEKHF 249 (385)
T ss_dssp -EEEEEB
T ss_pred -EEEeCC
Confidence 554443
No 300
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=94.37 E-value=1.6 Score=42.11 Aligned_cols=163 Identities=15% Similarity=0.122 Sum_probs=97.4
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCHH-HHHHH---Hhc-CCCCcEEeccccCCHHH----HHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSFE-NLEAV---RSA-GVKCPLLCKEFIVDAWQ----IYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~e-dL~~V---r~a-~v~lPVL~KDFIid~~Q----I~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-++. -..++.=+.+ ..+.+ ++. .-.+||+..=.-.+..+ ...|..+|||+|++..
T Consensus 36 ~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 36 TKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3556667899999999872 1122222332 22222 221 23699997654444442 3446789999999988
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEEe--------CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCch
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVEV--------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
-.. +++.+.. +...+...++.+++=- =+.+.+.+..+. ..++|| ++-.-|+.
T Consensus 116 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgi--------------Kdssgd~~ 179 (301)
T 1xky_A 116 PYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSEI--ENIVAI--------------KDAGGDVL 179 (301)
T ss_dssp CCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHTS--TTEEEE--------------EECSSCHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcC--CCEEEE--------------EcCCCCHH
Confidence 755 5555544 4455666677765521 145556665554 579999 44445777
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEccccc
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIV 388 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLm 388 (407)
...+++... ++++.+ -+|-. +.+.....+|++|++-|.+=+
T Consensus 180 ~~~~~~~~~------~~~f~v--~~G~d--~~~l~~l~~G~~G~is~~an~ 220 (301)
T 1xky_A 180 TMTEIIEKT------ADDFAV--YSGDD--GLTLPAMAVGAKGIVSVASHV 220 (301)
T ss_dssp HHHHHHHHS------CTTCEE--EESSG--GGHHHHHHTTCCEEEESTHHH
T ss_pred HHHHHHHhc------CCCeEE--EECcH--HHHHHHHHcCCCEEEcCHHHh
Confidence 777776542 234333 34432 235556689999999886643
No 301
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=94.36 E-value=0.14 Score=50.63 Aligned_cols=165 Identities=15% Similarity=0.117 Sum_probs=97.9
Q ss_pred CCceEEEEecccCCC------cCCCCCCCCHHHHHHHHH-HcCCcEEEEE---ecCCcCCCCHHHH----HHHHhcCCCC
Q 015424 175 GLPALIAEVKKASPS------RGILREDFDPVEIARSYE-KGGAACLSIL---TDEKYFKGSFENL----EAVRSAGVKC 240 (407)
Q Consensus 175 ~~~~vIAEvKraSPS------kG~i~~~~dp~~iA~ay~-~~GA~aISVL---Td~~~F~Gs~edL----~~Vr~a~v~l 240 (407)
+++.++.||--.+|- .-.-....++.++|+.+. +.||+.|-|- |+|.+-.=+.+.+ +.+++. +++
T Consensus 52 n~p~iam~V~D~~pe~~~~v~~~~~~~~~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~-~~v 130 (323)
T 4djd_D 52 NRPVIGMEVQDIVPDWPDVLKDPFTDVINEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQA-VGV 130 (323)
T ss_dssp SCCEEEEEEESSCCSCCHHHHGGGTTTTTCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHH-CCS
T ss_pred CCCeEEEEEecCCccchhhHHHHHHHHHHhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhh-CCc
Confidence 567899999999887 211112447999999998 9999999996 5665433355443 344454 789
Q ss_pred cEEe---ccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHhcccCCcEEEee
Q 015424 241 PLLC---KEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH-DEREMDRVLGIEGIELIGIN 316 (407)
Q Consensus 241 PVL~---KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh-t~eElerAl~l~Ga~iIGIN 316 (407)
||.- ++--.++.-+.+|..+|++...+|-++-.+ .+..+...+.++|..+++-.. |.+.+++.... +.-.||.
T Consensus 131 PlsIDg~~~~T~~~eV~eaAleagag~~~lINsv~~~-~~~~m~~laa~~g~~vVlmh~~d~~~~~~l~~~--a~~~GI~ 207 (323)
T 4djd_D 131 PLVVVGCGDVEKDHEVLEAVAEAAAGENLLLGNAEQE-NYKSLTAACMVHKHNIIARSPLDINICKQLNIL--INEMNLP 207 (323)
T ss_dssp CEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEEBTT-BCHHHHHHHHHHTCEEEEECSSCHHHHHHHHHH--HHTTTCC
T ss_pred eEEEECCCCCCCCHHHHHHHHHhcCCCCCeEEECCcc-cHHHHHHHHHHhCCeEEEEccchHHHHHHHHHH--HHHcCCC
Confidence 9763 232233445666788999854333333322 346788889999998888543 55544443322 2233443
Q ss_pred cccc-ccccccccccccccCchhHHHHh
Q 015424 317 NRNL-AISIFSYRTETFEVDNSNTKKLL 343 (407)
Q Consensus 317 nRdL-~~~~~~~t~~Tf~vDl~~t~~L~ 343 (407)
..++ +.|+.+.-.++++-++++..+|.
T Consensus 208 ~e~IIlDPg~g~fgk~~e~~l~~l~~ir 235 (323)
T 4djd_D 208 LDHIVIDPSIGGLGYGIEYSFSIMERIR 235 (323)
T ss_dssp GGGEEEECCCCCTTTTHHHHHHHHHHHH
T ss_pred HHHEEEeCCCccccCCHHHHHHHHHHHH
Confidence 2222 35565533345555555544443
No 302
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=94.28 E-value=0.046 Score=53.46 Aligned_cols=87 Identities=10% Similarity=0.043 Sum_probs=59.5
Q ss_pred CCHHHHHHHHhcCCCCcEE--eccccCCHHHHHHHHHcCCCEEEEeccCCC---H-HHHHHHHHHHHHcCCcEEEEeCCH
Q 015424 225 GSFENLEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLP---D-LDIRYMTKICKLLGLTALVEVHDE 298 (407)
Q Consensus 225 Gs~edL~~Vr~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL~---~-~~L~~Li~~a~~LGL~aLVEVht~ 298 (407)
-+++.+..+++. +++||+ +-..|-++.++.+++.+|||+|+++.+++. + ..++.|.+..+. ..+.
T Consensus 194 ~~~~ll~~i~~~-~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~~--------~~~~ 264 (297)
T 4adt_A 194 APIDLILLTRKL-KRLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAVSN--------FNNP 264 (297)
T ss_dssp CCHHHHHHHHHH-TSCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHT--------TTCH
T ss_pred CCHHHHHHHHHh-cCCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHHh--------hCCH
Confidence 356777888876 789987 666666999999999999999999998883 2 234555554443 3555
Q ss_pred HHHHHHhcccCCcEEEeecccc
Q 015424 299 REMDRVLGIEGIELIGINNRNL 320 (407)
Q Consensus 299 eElerAl~l~Ga~iIGINnRdL 320 (407)
+++..+-..-|-.+.|++..++
T Consensus 265 ~~~~~i~~~~~~~~~~~~~~~~ 286 (297)
T 4adt_A 265 KILLNVSLGLGKAMHGNTKVSN 286 (297)
T ss_dssp HHHHHTTTTCCCCCCCCCC---
T ss_pred HHHHHHHhhcccCCCCCCcccc
Confidence 6655544322667899987766
No 303
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=94.28 E-value=2.3 Score=41.37 Aligned_cols=166 Identities=14% Similarity=0.095 Sum_probs=98.3
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCHHHH-HHH---Hhc-CCCCcEEeccccCCHHH----HHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSFENL-EAV---RSA-GVKCPLLCKEFIVDAWQ----IYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~edL-~~V---r~a-~v~lPVL~KDFIid~~Q----I~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-|+. -..++.=|.+.- +.+ .+. .-.+||+..=.-.+..+ ...|..+|||+|+++.
T Consensus 46 ~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 46 CNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3445667789999998762 112222233332 222 221 23799997654444542 3457789999999987
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEEe--------CCHHHHHHHhc-ccCCcEEEeeccccccccccccccccccCc
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVEV--------HDEREMDRVLG-IEGIELIGINNRNLAISIFSYRTETFEVDN 336 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVEV--------ht~eElerAl~-l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl 336 (407)
-.. +++.+.. +...+...++.+++=- =+.+.+.+..+ . ..++|| ++-.-|+
T Consensus 126 P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pnIvgi--------------Kdssgd~ 189 (315)
T 3si9_A 126 PYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDF--KNIIGV--------------KDATGKI 189 (315)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHC--TTEEEE--------------EECSCCT
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhhC--CCEEEE--------------EeCCCCH
Confidence 643 5554444 4455666677765421 14555666555 4 479999 4445677
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 391 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 391 (407)
....+++... ++++.+. +|-. +.+.....+|++|++-|.+=+-+.
T Consensus 190 ~~~~~l~~~~------~~~f~v~--~G~d--~~~l~~l~~G~~G~is~~an~~P~ 234 (315)
T 3si9_A 190 ERASEQREKC------GKDFVQL--SGDD--CTALGFNAHGGVGCISVSSNVAPK 234 (315)
T ss_dssp HHHHHHHHHH------CSSSEEE--ESCG--GGHHHHHHTTCCEEEESGGGTCHH
T ss_pred HHHHHHHHHc------CCCeEEE--ecCH--HHHHHHHHcCCCEEEecHHHhhHH
Confidence 7777777642 2344443 3432 224455679999999887755443
No 304
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.28 E-value=0.47 Score=44.81 Aligned_cols=154 Identities=12% Similarity=0.173 Sum_probs=88.2
Q ss_pred EEEEecCCcCCCCHHH-HHHHHhcCCCCcEEeccccCCHHHHHHH-HHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcE
Q 015424 214 LSILTDEKYFKGSFEN-LEAVRSAGVKCPLLCKEFIVDAWQIYYA-RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTA 291 (407)
Q Consensus 214 ISVLTd~~~F~Gs~ed-L~~Vr~a~v~lPVL~KDFIid~~QI~eA-r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~a 291 (407)
+-.-|+.-||+--... +..+++. -=+||++-+=.-+..++.+| ...|++.|=+-.+ ++..++.+-+..+++. +.
T Consensus 11 ~~~~~~~~~~~~~m~~~~~~l~~~-~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~--t~~a~e~I~~l~~~~~-~~ 86 (232)
T 4e38_A 11 VDLGTENLYFQSMMSTINNQLKAL-KVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFR--SDAAVEAIRLLRQAQP-EM 86 (232)
T ss_dssp ---------CCCCHHHHHHHHHHH-CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETT--STTHHHHHHHHHHHCT-TC
T ss_pred cccCchhhHHHHHHHHHHHHHHhC-CEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCC--CCCHHHHHHHHHHhCC-CC
Confidence 4455777888876543 3445554 34899987765566676664 6789998777443 3333333434444552 23
Q ss_pred EEE---eCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHH
Q 015424 292 LVE---VHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPD 368 (407)
Q Consensus 292 LVE---Vht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~e 368 (407)
++- |-|.++++.|+++ ||++|-.-+ .|.+....... .+++++. |+.|++
T Consensus 87 ~iGaGTVlt~~~a~~Ai~A-GA~fIvsP~----------------~~~~vi~~~~~---------~gi~~ip--Gv~Tpt 138 (232)
T 4e38_A 87 LIGAGTILNGEQALAAKEA-GATFVVSPG----------------FNPNTVRACQE---------IGIDIVP--GVNNPS 138 (232)
T ss_dssp EEEEECCCSHHHHHHHHHH-TCSEEECSS----------------CCHHHHHHHHH---------HTCEEEC--EECSHH
T ss_pred EEeECCcCCHHHHHHHHHc-CCCEEEeCC----------------CCHHHHHHHHH---------cCCCEEc--CCCCHH
Confidence 333 5689999999997 999985421 13233222211 2445544 788999
Q ss_pred HHHHHHHcCCCEEEEcccccCCCCh-HHHHHhhhc
Q 015424 369 DIAYVQEAGVKAVLVGESIVKQDDP-GKGITGLFG 402 (407)
Q Consensus 369 D~~~l~~~GadaVLVGeaLmk~~dp-~~~i~~L~~ 402 (407)
++.+..++|+|.|=+ +-...-. ...++.|.+
T Consensus 139 Ei~~A~~~Gad~vK~---FPa~~~gG~~~lkal~~ 170 (232)
T 4e38_A 139 TVEAALEMGLTTLKF---FPAEASGGISMVKSLVG 170 (232)
T ss_dssp HHHHHHHTTCCEEEE---CSTTTTTHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEE---CcCccccCHHHHHHHHH
Confidence 999999999998844 2222221 366666654
No 305
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=94.27 E-value=0.18 Score=49.93 Aligned_cols=93 Identities=15% Similarity=0.233 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCC-CHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL-~~~ 275 (407)
+..++++.+++.|...| |+.+-..+++.++.+|+. +++||..-+-+.++.++.++...| +|.|.+....+ +-.
T Consensus 205 ~a~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit 279 (384)
T 2pgw_A 205 DAINMCRKLEKYDIEFI----EQPTVSWSIPAMAHVREK-VGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQ 279 (384)
T ss_dssp HHHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-CSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHH
T ss_pred HHHHHHHHHHhcCCCEE----eCCCChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHH
Confidence 45567888888887755 344555689999999987 899999999999999999987765 89999977765 445
Q ss_pred HHHHHHHHHHHcCCcEEEEe
Q 015424 276 DIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVEV 295 (407)
+...+.+.|+..|+.+++-+
T Consensus 280 ~~~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 280 PMMKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp HHHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHCCCeEeecc
Confidence 67788999999999988765
No 306
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=94.24 E-value=0.12 Score=60.35 Aligned_cols=113 Identities=11% Similarity=0.015 Sum_probs=70.5
Q ss_pred CCHHHHHHHHHHHHHc--CCcEEEE-eC---CHHHHHHHhcccCCcEEEeecccccccccccccccc--ccCchhHHHHh
Q 015424 272 LPDLDIRYMTKICKLL--GLTALVE-VH---DEREMDRVLGIEGIELIGINNRNLAISIFSYRTETF--EVDNSNTKKLL 343 (407)
Q Consensus 272 L~~~~L~~Li~~a~~L--GL~aLVE-Vh---t~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf--~vDl~~t~~L~ 343 (407)
.+.+++..+++..++. +..++|- |. ...++..+.++ |+|.|-|.+.+= +++ -+..++ ..-+.+. .++
T Consensus 1010 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kA-GAD~IvVsG~eG-GTg--asp~~~~~~~GlPt~-~aL 1084 (1520)
T 1ofd_A 1010 YSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKA-NADIIQISGHDG-GTG--ASPLSSIKHAGSPWE-LGV 1084 (1520)
T ss_dssp SSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHT-TCSEEEEECTTC-CCS--SEEHHHHHHBCCCHH-HHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHc-CCCEEEEeCCCC-ccC--CCcchhhcCCchhHH-HHH
Confidence 3456677788877775 5555444 32 36677788887 999999977652 211 111000 0011111 111
Q ss_pred hcccc----cccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 344 EGERG----EIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 344 ~~~~~----~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
..+.. ..+ ...+++|+.|||.|..|+.++..+||++|-+|+++|.+
T Consensus 1085 ~ev~~al~~~gl-r~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a 1134 (1520)
T 1ofd_A 1085 TEVHRVLMENQL-RDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIA 1134 (1520)
T ss_dssp HHHHHHHHHTTC-GGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHH
T ss_pred HHHHHHHHhcCC-CCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHH
Confidence 11110 011 13589999999999999999999999999999998653
No 307
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=94.22 E-value=0.27 Score=48.62 Aligned_cols=90 Identities=16% Similarity=0.123 Sum_probs=71.6
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCCC-HH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~ 275 (407)
+..++++.+++.|. .| -+| + . +++.++.+|+. +++||...+-+.++.++.++...| +|.|.+...... -.
T Consensus 204 ~a~~~~~~l~~~~i-~i---E~P-~-~-~~~~~~~l~~~-~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit 275 (379)
T 2rdx_A 204 NAIRLARATRDLDY-IL---EQP-C-R-SYEECQQVRRV-ADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLS 275 (379)
T ss_dssp HHHHHHHHTTTSCC-EE---ECC-S-S-SHHHHHHHHTT-CCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHH
T ss_pred HHHHHHHHHHhCCe-EE---eCC-c-C-CHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHH
Confidence 44566777777775 43 344 3 3 89999999986 899999999999999998886654 999999888774 45
Q ss_pred HHHHHHHHHHHcCCcEEEEe
Q 015424 276 DIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVEV 295 (407)
+...+.+.|+..|+.+++-+
T Consensus 276 ~~~~i~~~A~~~g~~~~~~~ 295 (379)
T 2rdx_A 276 KARRTRDFLIDNRMPVVAED 295 (379)
T ss_dssp HHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHcCCeEEEee
Confidence 67788999999999998874
No 308
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.14 E-value=0.33 Score=51.30 Aligned_cols=117 Identities=9% Similarity=0.128 Sum_probs=89.8
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEecc-------
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA------- 270 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa------- 270 (407)
+..+-+.+..++|++.|-|-|--.+-.+-.+.++.||+...++||+... +.+..+......+|||+|..+.-
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGN-VaT~e~a~~Li~aGAD~vkVGiGpGSiCtT 359 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGN-VVTREQAAQLIAAGADGLRIGMGSGSICIT 359 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEE-ECSHHHHHHHHHHTCSEEEECSSCSTTBCC
T ss_pred cHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEecc-ccCHHHHHHHHHcCCCEEeecCCCCccccc
Confidence 5677889999999999988776666666677888888764589999887 47777777778899999987532
Q ss_pred -CC---CHHHHH---HHHHHHHHcCCcEEEE--eCCHHHHHHHhcccCCcEEEee
Q 015424 271 -VL---PDLDIR---YMTKICKLLGLTALVE--VHDEREMDRVLGIEGIELIGIN 316 (407)
Q Consensus 271 -iL---~~~~L~---~Li~~a~~LGL~aLVE--Vht~eElerAl~l~Ga~iIGIN 316 (407)
.. .-.++. +..+.++.+|..++.+ +++.-++-+|+.+ ||+.|.+-
T Consensus 360 r~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaa-GAd~VMlG 413 (556)
T 4af0_A 360 QEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALAL-GASAVMMG 413 (556)
T ss_dssp TTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEES
T ss_pred ccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhc-CCCEEEEc
Confidence 11 112343 4455567789998887 7899999999998 99999874
No 309
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=94.10 E-value=0.19 Score=49.27 Aligned_cols=93 Identities=11% Similarity=0.217 Sum_probs=75.5
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCCCH-H
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-L 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~ 275 (407)
+..++++.+++.|...| |+.+-..+++.++.+++. +++||...+-+.++.++.++...| +|.|.+-...+.. .
T Consensus 204 ~a~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~ 278 (359)
T 1mdl_A 204 AAIKRSQALQQEGVTWI----EEPTLQHDYEGHQRIQSK-LNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVT 278 (359)
T ss_dssp HHHHHHHHHHHHTCSCE----ECCSCTTCHHHHHHHHHT-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHH
T ss_pred HHHHHHHHHHHhCCCeE----ECCCChhhHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHH
Confidence 45567888888898765 455556789999999986 899999999999999998887665 8999998887754 5
Q ss_pred HHHHHHHHHHHcCCcEEEEe
Q 015424 276 DIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVEV 295 (407)
+..++.+.|+..|+.+++-+
T Consensus 279 ~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 279 GWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp HHHHHHHHHHHTTCCBCCBS
T ss_pred HHHHHHHHHHHcCCeEeecc
Confidence 67788899999999977664
No 310
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=94.03 E-value=0.39 Score=44.80 Aligned_cols=173 Identities=8% Similarity=0.078 Sum_probs=99.9
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCC-cEE----eccccCCHHHHHHHHHcCC--CEEEEecc
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKC-PLL----CKEFIVDAWQIYYARTKGA--DAVLLIAA 270 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~l-PVL----~KDFIid~~QI~eAr~~GA--DaVLLiaa 270 (407)
...++++.... .+.++=|-++ -|...+++-++.+++. .+. ||+ .-|. +..+..+...-+ |.|.+.+
T Consensus 14 ~al~l~~~l~~-~v~~~KvG~~-l~~~~G~~~v~~L~~~-~~~~~VflDlK~~DI---~nTv~~~~~~~~~~d~vTVh~- 86 (222)
T 4dbe_A 14 LSYQVLKEMEN-ELYGIKVGLP-LVLDLGVDKTRELLIG-LDVEEIIVDFKLADI---GYIMKSIVERLSFANSFIAHS- 86 (222)
T ss_dssp CCHHHHHHHGG-GCSEEEEEHH-HHHHHCHHHHHHHHHT-CCCSEEEEEEEECSC---HHHHHHHHTTCTTCSEEEEES-
T ss_pred HHHHHHHHhCC-cCcEEEECHH-HHHhhCHHHHHHHHHh-cCCCeEEEEeeecch---HHHHHHHHHHHHhCCEEEEEc-
Confidence 44556665533 3566666543 2444457788888873 367 777 3453 333433322222 8877744
Q ss_pred CCC-HHHHHHHHHHHHHc--CCcEEEEeCCH--------HHHHHHhcccCCcEEEeeccccccccccccccccccCchhH
Q 015424 271 VLP-DLDIRYMTKICKLL--GLTALVEVHDE--------REMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNT 339 (407)
Q Consensus 271 iL~-~~~L~~Li~~a~~L--GL~aLVEVht~--------eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t 339 (407)
... .+-++.+.+.+++. |+.+|...++. .-+..+.++ |.+-+-+. .| ..+..
T Consensus 87 ~~G~~~~~~~a~~~~~~~~~~v~vLts~s~~~~~~~~~~~~a~~a~~~-g~~GvV~s-------------at---~p~e~ 149 (222)
T 4dbe_A 87 FIGVKGSLDELKRYLDANSKNLYLVAVMSHEGWSTLFADYIKNVIREI-SPKGIVVG-------------GT---KLDHI 149 (222)
T ss_dssp TTCTTTTHHHHHHHHHHTTCEEEEEEECSSTTCCCTTHHHHHHHHHHH-CCSEEEEC-------------TT---CHHHH
T ss_pred CcCcHHHHHHHHHHHHhcCCcEEEEEeCCCcchHHHHHHHHHHHHHHh-CCCEEEEC-------------CC---CHHHH
Confidence 445 55788888888775 45556677663 333444554 65422111 11 11222
Q ss_pred HHHhhcccccccccCCceEEEeeCCCCHH-HHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 340 KKLLEGERGEIIRQKNIIVVGESGLFTPD-DIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 340 ~~L~~~~~~~~i~~~~v~vVAESGI~t~e-D~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
..+.+. .+ + .++.-.||.-.. +...+.++|+|.++||.+|++++||.++.+++..
T Consensus 150 ~~ir~~------~~-~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~i~~ 205 (222)
T 4dbe_A 150 TQYRRD------FE-K-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINK 205 (222)
T ss_dssp HHHHHH------CT-T-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred HHHHHh------CC-C-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcCCCCHHHHHHHHHH
Confidence 333332 12 3 455567774211 4555567999999999999999999998887753
No 311
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=94.00 E-value=0.55 Score=48.10 Aligned_cols=142 Identities=11% Similarity=0.071 Sum_probs=95.4
Q ss_pred CCCc----EEeccccCCH---------------HHHHHHHHcCCCEEEEeccC--------CCHHH----HHHHHHHHHH
Q 015424 238 VKCP----LLCKEFIVDA---------------WQIYYARTKGADAVLLIAAV--------LPDLD----IRYMTKICKL 286 (407)
Q Consensus 238 v~lP----VL~KDFIid~---------------~QI~eAr~~GADaVLLiaai--------L~~~~----L~~Li~~a~~ 286 (407)
.++| +|.-|-.-+. ..|.++..+|-+.|.++++. +++.- -++++++|+.
T Consensus 75 ~~vP~~~VaLHlDHg~~~~w~~~~~~~am~~a~e~i~~aI~aGFtSVMiD~S~~~~~~~~pl~eNi~~~rt~elv~~Ah~ 154 (420)
T 2fiq_A 75 VGFARERIILGGDHLGPNCWQQENVDAAMEKSVELVKAYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAES 154 (420)
T ss_dssp HTCCGGGEEEEEEEESSGGGTTSBHHHHHHHHHHHHHHHHHTTCCEEEECCCSCCBTCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCcCcceEEEECCCCCCccccccchhhhhhhHHHHHHHHHHhCCCEEEECCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 3677 5677766665 67888999999999999998 34422 2778899998
Q ss_pred c-------------CCc---------EEEE--eCCHHHHHHHhc-------ccCCcE-------EEeecccccccccccc
Q 015424 287 L-------------GLT---------ALVE--VHDEREMDRVLG-------IEGIEL-------IGINNRNLAISIFSYR 328 (407)
Q Consensus 287 L-------------GL~---------aLVE--Vht~eElerAl~-------l~Ga~i-------IGINnRdL~~~~~~~t 328 (407)
. |.+ ..-+ ..|.+|+.+.++ ..|.+. +.|- +|+-.|..
T Consensus 155 ~~~~~~eaElG~vgG~Ev~v~~~~~~~~~~~~~T~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~----iGt~HG~y 230 (420)
T 2fiq_A 155 VATDCQREQLSYVIGTEVPVPGGEASAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQ----PGVEFDHS 230 (420)
T ss_dssp HCCHHHHHHCEEEEECSSCC----------CCCCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECC----CSCEECSS
T ss_pred HcccCCcccceEEeeeecCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHhhCCCcccccceEEEEe----CCccCCCC
Confidence 5 222 1112 578999988876 347665 3322 12222322
Q ss_pred ccccccCchhHHHHhhcccccccccCCceE--EEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 329 TETFEVDNSNTKKLLEGERGEIIRQKNIIV--VGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 329 ~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~v--VAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
.....|++.+.+|.+.+. .++.++ =+.||+ +.++++++.+.|+.-+=||+.|...
T Consensus 231 -~~~~ld~e~l~~I~~~v~-----~P~LVle~HGgSg~-~~e~l~~~v~~Gi~kiNV~t~l~~a 287 (420)
T 2fiq_A 231 -NIIHYQPQEAQALAQWIE-----NTRMVYEAHSTDYQ-TRTAYWELVRDHFAILKVGPALTFA 287 (420)
T ss_dssp -CEECCCGGGGHHHHHHHT-----TSSCEEEESCCTTC-CHHHHHHHHHTTEEEEEECHHHHHH
T ss_pred -CCCCcCHHHHHHHHHhcC-----CCCEEEecCCCCCC-CHHHHHHHHHcCCCEEEECHHHHHH
Confidence 467789999999987631 112232 135666 8899999999999999999888643
No 312
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=93.99 E-value=0.11 Score=49.40 Aligned_cols=61 Identities=16% Similarity=0.122 Sum_probs=50.7
Q ss_pred CCcEEEEEecCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCH
Q 015424 210 GAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (407)
Q Consensus 210 GA~aISVLTd~~~F~Gs~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~ 274 (407)
|-.-|-+.. .+- .|+.+.++.+|+. + ++||+....|.++.|+.++.. |||+|..+.++..+
T Consensus 159 g~~~vY~e~-sG~-~g~~~~v~~ir~~-~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~ 220 (235)
T 3w01_A 159 RLPVMYIEY-SGI-YGDVSKVQAVSEH-LTETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKD 220 (235)
T ss_dssp CCSEEEEEC-TTS-CCCHHHHHHHHTT-CSSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHC
T ss_pred CCCEEEEec-CCC-cCCHHHHHHHHHh-cCCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecC
Confidence 556666655 444 4689999999986 7 899999999999999998877 99999999988754
No 313
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=93.98 E-value=0.069 Score=52.24 Aligned_cols=93 Identities=23% Similarity=0.253 Sum_probs=67.7
Q ss_pred CccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEe-cCCcCCC---CHHHHHHHHh
Q 015424 160 ARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT-DEKYFKG---SFENLEAVRS 235 (407)
Q Consensus 160 ~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLT-d~~~F~G---s~edL~~Vr~ 235 (407)
+..+...++.. ...|+..+ ...+.|+.+.+.||++|-+-. +.....| +++.+..+++
T Consensus 113 p~~~~~~l~~~-----g~~v~~~v--------------~s~~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~ 173 (326)
T 3bo9_A 113 PTKYIRELKEN-----GTKVIPVV--------------ASDSLARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSR 173 (326)
T ss_dssp CHHHHHHHHHT-----TCEEEEEE--------------SSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHH
T ss_pred cHHHHHHHHHc-----CCcEEEEc--------------CCHHHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHH
Confidence 35677777653 24566544 123567788889999988743 2222212 4567777777
Q ss_pred cCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCC
Q 015424 236 AGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 236 a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (407)
. +++||+.-..|.++.++.++..+|||+|.+..+++
T Consensus 174 ~-~~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~ 209 (326)
T 3bo9_A 174 S-VNIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFV 209 (326)
T ss_dssp H-CSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred H-cCCCEEEECCCCCHHHHHHHHHhCCCEEEechHHH
Confidence 6 79999999999999999999999999999998876
No 314
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=93.97 E-value=0.033 Score=55.01 Aligned_cols=143 Identities=13% Similarity=0.074 Sum_probs=86.2
Q ss_pred CCHHHHHHHHHcCCCEEEEeccC----C--CHHHHHHHHHHHHHcCCcEEEEeCCHHH-------------------HHH
Q 015424 249 VDAWQIYYARTKGADAVLLIAAV----L--PDLDIRYMTKICKLLGLTALVEVHDERE-------------------MDR 303 (407)
Q Consensus 249 id~~QI~eAr~~GADaVLLiaai----L--~~~~L~~Li~~a~~LGL~aLVEVht~eE-------------------ler 303 (407)
+.+.++ +++||+.|+|+.+= + +++.+..=++.|.+.||.++++|-...| ++.
T Consensus 131 ISa~mL---kd~G~~~ViiGHSERR~~f~Etde~V~~Kv~aAl~~GL~pIvCVGEtleere~~~~~~g~t~~vv~~Ql~~ 207 (310)
T 3s6d_A 131 ISPVCL---RDMNVSIVELGHAERRAIFGETDQQVARKAAAAADQGLIPLVCIGEVSTLGPIVSEAIGRAVGECEAQIRP 207 (310)
T ss_dssp CCHHHH---HHTTCCEEEESCHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEECCCSCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHH---HHcCCCEEEecccccccccCCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHhhhhccccccHHHHHHHHHHH
Confidence 455554 56799999999982 2 5555566677888899999999974321 222
Q ss_pred Hhc-c--cCCcEEEeeccccccccccccccccccCchhHHHHhhccccc---cc--ccCCceEEEeeCCCCHHHHHH-HH
Q 015424 304 VLG-I--EGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGE---II--RQKNIIVVGESGLFTPDDIAY-VQ 374 (407)
Q Consensus 304 Al~-l--~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~---~i--~~~~v~vVAESGI~t~eD~~~-l~ 374 (407)
++. + ....+|....-=.||||..- +.+...+....+|.- .. ...++.++..|++ +++.+.. +.
T Consensus 208 ~l~~l~~~~~vVIAYEPVWAIGTGk~A-------tpe~aqevh~~IR~~l~~~~~~~a~~vrILYGGSV-~~~n~~~~~l 279 (310)
T 3s6d_A 208 VLEALPRDAPVIFAYEPVWAIGKPQPA-------RVDHVGAVVSGIRSVIERIDRHRKGEVRILYGGSA-GPGLWGPGGL 279 (310)
T ss_dssp HHHHSCTTSCEEEEECCGGGC-----C-------CHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEEEEE-CTTTTTTTSG
T ss_pred HHhcCCcccceEEEECChhhccCCCCC-------CHHHHHHHHHHHHHHHHHhhhcccCceeEEEcCcc-CHHHHhhhcc
Confidence 221 1 12246777665555544322 222233322222110 00 1246788888888 4555544 12
Q ss_pred HcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 375 EAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 375 ~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
..++||+|||.+-++.++..+.++++.+
T Consensus 280 ~~dVDG~LVGgASL~a~~F~~Ii~e~~~ 307 (310)
T 3s6d_A 280 GKEVDGMFLGRFAHDIEGVRKVVREVEE 307 (310)
T ss_dssp GGTCSEEEECGGGGSHHHHHHHHHHHHH
T ss_pred cCCCCEEEeeheeecHHHHHHHHHHHHH
Confidence 4899999999999999998888887753
No 315
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=93.95 E-value=1.6 Score=42.87 Aligned_cols=139 Identities=12% Similarity=0.083 Sum_probs=100.9
Q ss_pred CCCcEE-eccccCCHHHHHHHHHcCCCEEEEeccCCCHH----HHHHHHHHHHHcCCcEEEE------------------
Q 015424 238 VKCPLL-CKEFIVDAWQIYYARTKGADAVLLIAAVLPDL----DIRYMTKICKLLGLTALVE------------------ 294 (407)
Q Consensus 238 v~lPVL-~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~----~L~~Li~~a~~LGL~aLVE------------------ 294 (407)
.++||. .-|-.-+...+.+|..+|-+.|.++.+-++-+ .-++++++||..|+.+=.|
T Consensus 73 ~~VPValHLDHg~~~e~~~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~ 152 (307)
T 3n9r_A 73 PHIPVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDA 152 (307)
T ss_dssp TTSCEEEEEEEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------C
T ss_pred CCCcEEEECCCCCCHHHHHHHHHhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccc
Confidence 478975 56666667889999999999999999999753 4567889999888766322
Q ss_pred -eCCHHHHHHHhcccCCcEEEeecccccccccccc-ccccccCchhHHHHhhcccccccccCCceEEEe--e--------
Q 015424 295 -VHDEREMDRVLGIEGIELIGINNRNLAISIFSYR-TETFEVDNSNTKKLLEGERGEIIRQKNIIVVGE--S-------- 362 (407)
Q Consensus 295 -Vht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t-~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAE--S-------- 362 (407)
-.|++|+.+..+..|+|.+.+.-=+- || .|. +.+...|++...++.+. .++++|.= |
T Consensus 153 ~yT~Peea~~Fv~~TgvD~LAvaiGt~--HG-~Yk~~~~p~Ld~~~L~~I~~~--------~~~PLVlHGgS~vp~~~~~ 221 (307)
T 3n9r_A 153 VLVNPKEAEQFVKESQVDYLAPAIGTS--HG-AFKFKGEPKLDFERLQEVKRL--------TNIPLVLHGASAIPDNVRK 221 (307)
T ss_dssp CSCCHHHHHHHHHHHCCSEEEECSSCC--SS-SBCCSSSCCCCHHHHHHHHHH--------HCSCEEESSCCCCCHHHHH
T ss_pred cCCCHHHHHHHHHHHCCCEEEEecCCc--cc-ccCCCCCCccCHHHHHHHHhc--------CCCCeEEeCCCCcchHHHH
Confidence 14788888876544999988853332 21 233 23467898888888432 13455554 4
Q ss_pred -------------CCCCHHHHHHHHHcCCCEEEEccccc
Q 015424 363 -------------GLFTPDDIAYVQEAGVKAVLVGESIV 388 (407)
Q Consensus 363 -------------GI~t~eD~~~l~~~GadaVLVGeaLm 388 (407)
|+ ..++++++.++|+.-|=|++.+.
T Consensus 222 ~~~~~gg~~~~~~G~-p~e~i~~ai~~GV~KiNi~Tdl~ 259 (307)
T 3n9r_A 222 SYLDAGGDLKGSKGV-PFEFLQESVKGGINKVNTDTDLR 259 (307)
T ss_dssp HHHHTTCCCTTCBCC-CHHHHHHHHHTTEEEEEECHHHH
T ss_pred HHHHhcCccCCCCCC-CHHHHHHHHHcCceEEEechHHH
Confidence 77 78899999999999999998764
No 316
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=93.94 E-value=0.15 Score=50.76 Aligned_cols=71 Identities=24% Similarity=0.288 Sum_probs=55.8
Q ss_pred HHHHHHHHcCCcEEEEEec--C--CcCCCCHHHHHHHHhcCC--CCcEEeccccCCHHHHHHHHHcCCCEEEEeccCC
Q 015424 201 EIARSYEKGGAACLSILTD--E--KYFKGSFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVLTd--~--~~F~Gs~edL~~Vr~a~v--~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (407)
+.|+.+.+.||++|.|-.- . .+....++.+..+++. + ++||+.-..|.+..++.++.++|||+|.+...++
T Consensus 237 e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~-~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l 313 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKA-AQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVV 313 (370)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHH-TTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHH-hCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHH
Confidence 6788889999999999431 1 1112345667778775 5 7999999999999999999999999999987555
No 317
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=93.83 E-value=4.1 Score=39.26 Aligned_cols=163 Identities=13% Similarity=0.092 Sum_probs=98.4
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCHH-HHHHH---Hhc-CCCCcEEeccccCCHHH----HHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSFE-NLEAV---RSA-GVKCPLLCKEFIVDAWQ----IYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~e-dL~~V---r~a-~v~lPVL~KDFIid~~Q----I~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-|+. -..++.=+.+ ..+.+ ++. .-.+||+..=.-.+..+ ...|..+|||++++..
T Consensus 40 ~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 40 REVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVT 119 (304)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3556667889999999872 2222222333 33322 221 23699997655445442 3446788999999988
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEE-e-------CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCch
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVE-V-------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVE-V-------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
-.. +++.+.. +...+...++.+++= + =+.+.+.+..+. ..++|| ++-.-|+.
T Consensus 120 P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgi--------------Kdssgd~~ 183 (304)
T 3cpr_A 120 PYYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRLSEL--PTILAV--------------XDAKGDLV 183 (304)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTS--TTEEEE--------------EECSCCHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcC--CCEEEE--------------ecCCCCHH
Confidence 754 5555444 445566678776552 1 145566665554 579999 44445777
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
...+++.. . +..+ -+|-. +.+.....+|++|++-|.+=+-+
T Consensus 184 ~~~~~~~~-----~---~f~v--~~G~d--~~~l~~l~~G~~G~is~~an~~P 224 (304)
T 3cpr_A 184 AATSLIKE-----T---GLAW--YSGDD--PLNLVWLALGGSGFISVIGHAAP 224 (304)
T ss_dssp HHHHHHHH-----H---CCEE--EECSG--GGHHHHHHTTCCEEEESGGGTCH
T ss_pred HHHHHHHh-----c---CEEE--EECcH--HHHHHHHHCCCCEEEecHHHhhH
Confidence 77777653 1 3333 34442 22455567899999999876543
No 318
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=93.75 E-value=3.4 Score=39.75 Aligned_cols=165 Identities=13% Similarity=0.103 Sum_probs=97.9
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCHH-HHHHHH---hc-CC-CCcEEeccccCCHHH----HHHHHHcCCCEEEEe
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSFE-NLEAVR---SA-GV-KCPLLCKEFIVDAWQ----IYYARTKGADAVLLI 268 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~e-dL~~Vr---~a-~v-~lPVL~KDFIid~~Q----I~eAr~~GADaVLLi 268 (407)
.++++.+.+.|+++|-++. -..++.=+.+ ..+.++ +. .- .+||+..=.-.+..+ ...|..+|||+|++.
T Consensus 31 ~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 110 (301)
T 3m5v_A 31 ARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSV 110 (301)
T ss_dssp HHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 3455667889999998872 1222222333 222222 22 23 699997654444442 345678999999999
Q ss_pred ccCC---CHHHHHH-HHHHHHHcCCcEEEEe--------CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCc
Q 015424 269 AAVL---PDLDIRY-MTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDN 336 (407)
Q Consensus 269 aaiL---~~~~L~~-Li~~a~~LGL~aLVEV--------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl 336 (407)
.-.. +++.+.. +-..+...++.+++=- =+.+.+.+..+. -..++|| ++-.-|+
T Consensus 111 ~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~-~pnivgi--------------Kdssgd~ 175 (301)
T 3m5v_A 111 APYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRD-CENIYGV--------------KEASGNI 175 (301)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHH-CTTEEEE--------------EECSSCH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhc-CCCEEEE--------------EeCCCCH
Confidence 7654 5555444 4455666677765421 145555555553 2579999 4445677
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
....+++.. . ++..+ -+|-.. .+.....+|++|++-|.+=+-+
T Consensus 176 ~~~~~~~~~-----~--~~f~v--~~G~d~--~~~~~l~~G~~G~is~~~n~~P 218 (301)
T 3m5v_A 176 DKCVDLLAH-----E--PRMML--ISGEDA--INYPILSNGGKGVISVTSNLLP 218 (301)
T ss_dssp HHHHHHHHH-----C--TTSEE--EECCGG--GHHHHHHTTCCEEEESGGGTCH
T ss_pred HHHHHHHHh-----C--CCeEE--EEccHH--HHHHHHHcCCCEEEehHHHhhH
Confidence 777787764 1 24344 344422 2455677899999988765543
No 319
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=93.72 E-value=0.26 Score=48.54 Aligned_cols=98 Identities=8% Similarity=0.035 Sum_probs=77.2
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCC-CHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL-~~~ 275 (407)
+..++++.+++.|...| |+.+-..+++.++.+++. +++||...+-+.++.++.++...| +|.|.+....+ +-.
T Consensus 206 ~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~ 280 (371)
T 2ovl_A 206 GAIRAARALAPFDLHWI----EEPTIPDDLVGNARIVRE-SGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYT 280 (371)
T ss_dssp HHHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-HCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHH
T ss_pred HHHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHhh-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHH
Confidence 45567888888887765 455556789999999986 799999999999999998876654 89999987776 445
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCHHHHH
Q 015424 276 DIRYMTKICKLLGLTALVEVHDEREMD 302 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVEVht~eEle 302 (407)
+..++.+.|+..|+.+++ |+..|+-
T Consensus 281 ~~~~i~~~A~~~gi~~~~--h~~~~a~ 305 (371)
T 2ovl_A 281 TFRKVAALAEANNMLLTS--HGVHDLT 305 (371)
T ss_dssp HHHHHHHHHHHTTCCEEE--CSCHHHH
T ss_pred HHHHHHHHHHHcCCeEcc--ccHHHHH
Confidence 677889999999999887 5554443
No 320
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=93.71 E-value=2 Score=42.50 Aligned_cols=138 Identities=12% Similarity=0.139 Sum_probs=99.9
Q ss_pred CCCcEE-eccccCCHHHHHHHHHcCCCEEEEeccCCCHH----HHHHHHHHHHHcCCcEEEEe----------------C
Q 015424 238 VKCPLL-CKEFIVDAWQIYYARTKGADAVLLIAAVLPDL----DIRYMTKICKLLGLTALVEV----------------H 296 (407)
Q Consensus 238 v~lPVL-~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~----~L~~Li~~a~~LGL~aLVEV----------------h 296 (407)
.++||. .-|-.-+...+.+|..+|-+.|.++.+-++-+ ..++++++||..|+.+=.|+ .
T Consensus 74 ~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~v~~~~~yT 153 (323)
T 2isw_A 74 PDIPICIHLDHGDTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDVQNTVQLT 153 (323)
T ss_dssp TTSCEEEEEEEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------CCCC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccCCccCcccccccC
Confidence 478974 56777778889999999999999999999753 35678889998877662221 5
Q ss_pred CHHHHHHHhcccCCcEEEeecccccccccccc-ccccc--cCchhHHHHhhcccccccccCCceEEEee-----------
Q 015424 297 DEREMDRVLGIEGIELIGINNRNLAISIFSYR-TETFE--VDNSNTKKLLEGERGEIIRQKNIIVVGES----------- 362 (407)
Q Consensus 297 t~eElerAl~l~Ga~iIGINnRdL~~~~~~~t-~~Tf~--vDl~~t~~L~~~~~~~~i~~~~v~vVAES----------- 362 (407)
|++|+.+..+..|+|.+.+.-=+- || .|. +.+.. .|++...++.+.+ ++++|.=|
T Consensus 154 dPeea~~Fv~~TgvD~LAvaiGt~--HG-~Yk~~~~p~~~L~~~~L~~I~~~~--------~vpLVlHGgSsvp~~~~~~ 222 (323)
T 2isw_A 154 EPQDAKKFVELTGVDALAVAIGTS--HG-AYKFKSESDIRLAIDRVKTISDLT--------GIPLVMHGSSSVPKDVKDM 222 (323)
T ss_dssp CHHHHHHHHHHHCCSEEEECSSCC--SS-SBCCCC----CCCCHHHHHHHHHH--------CSCEEECSCCCCCHHHHHH
T ss_pred CHHHHHHHHHHHCCCEEEEecCcc--cc-ccCCCCCcccccCHHHHHHHHHHh--------CCCeEEECCCCCCHHHHHH
Confidence 677787777544999988864333 22 122 13445 8888888886642 45666655
Q ss_pred ------------CCCCHHHHHHHHHcCCCEEEEcccc
Q 015424 363 ------------GLFTPDDIAYVQEAGVKAVLVGESI 387 (407)
Q Consensus 363 ------------GI~t~eD~~~l~~~GadaVLVGeaL 387 (407)
|+ ..|+++++.++|+.-|=|++.+
T Consensus 223 ~~~~gg~~~~~~Gv-p~e~i~~ai~~GV~KiNi~Tdl 258 (323)
T 2isw_A 223 INKYGGKMPDAVGV-PIESIVHAIGEGVCKINVDSDS 258 (323)
T ss_dssp HHHTTCCCTTCBCC-CHHHHHHHHHTTEEEEEECHHH
T ss_pred HHHhccccccCCCC-CHHHHHHHHHCCCeEEEEChHH
Confidence 77 7889999999999999998876
No 321
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=93.66 E-value=0.04 Score=50.91 Aligned_cols=62 Identities=18% Similarity=0.193 Sum_probs=51.0
Q ss_pred HHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEecc
Q 015424 203 ARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (407)
Q Consensus 203 A~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa 270 (407)
.+...+...+++=+| |+ --++-++.+++. +++||+..+||.++.++.+|..+|||+|--...
T Consensus 120 ~~~i~~~~PD~iEiL--PG---i~p~iI~~i~~~-~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 120 VALIQKVQPDCIELL--PG---IIPEQVQKMTQK-LHIPVIAGGLIETSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp HHHHHHHCCSEEEEE--CT---TCHHHHHHHHHH-HCCCEEEESSCCSHHHHHHHHTTTEEEEEECCG
T ss_pred HHHHhhcCCCEEEEC--Cc---hhHHHHHHHHHh-cCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCH
Confidence 344566677888887 33 247889999987 899999999999999999999999999987544
No 322
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=93.66 E-value=1 Score=43.45 Aligned_cols=166 Identities=14% Similarity=0.113 Sum_probs=96.6
Q ss_pred HHHHHHHHHcCCcEEEEE-ecCCcCCCCHH-HHHHHH---hc-CCCCcEEeccccCCHH----HHHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFE-NLEAVR---SA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVL-Td~~~F~Gs~e-dL~~Vr---~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-++ |-..++.=+.+ ..+.++ +. .-.+||+..=.-.+.. ....|..+|||+|++..
T Consensus 28 ~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (300)
T 3eb2_A 28 GRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAIL 107 (300)
T ss_dssp HHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 344566778999998776 11122222333 333332 21 2478999754434443 23456788999999987
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEEe--------CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCch
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVEV--------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
-.. +++.+.. +-..+...++.+++=- =+.+-+.+..+. ..++|| ++-.-|+.
T Consensus 108 P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgi--------------Kdssgd~~ 171 (300)
T 3eb2_A 108 EAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEH--PRIRYI--------------KDASTNTG 171 (300)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHTS--TTEEEE--------------EECSSBHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHHcC--CCEEEE--------------EcCCCCHH
Confidence 654 5555544 4455666677664321 134555555454 579999 44455777
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 391 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 391 (407)
...+++... ++++.+. +|-.. .+-....+|++|++-|.+=+-+.
T Consensus 172 ~~~~~~~~~------~~~f~v~--~G~d~--~~~~~l~~G~~G~is~~an~~P~ 215 (300)
T 3eb2_A 172 RLLSIINRC------GDALQVF--SASAH--IPAAVMLIGGVGWMAGPACIAPR 215 (300)
T ss_dssp HHHHHHHHH------GGGSEEE--ECTTS--CHHHHHHTTCCEEEEGGGGTCHH
T ss_pred HHHHHHHHc------CCCeEEE--eCcHH--HHHHHHhCCCCEEEeChhhhhHH
Confidence 777776642 2333333 34332 23455678999999988765443
No 323
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=93.62 E-value=0.38 Score=47.23 Aligned_cols=162 Identities=16% Similarity=0.214 Sum_probs=89.8
Q ss_pred CcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE--e--ccccCCHH-HHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHH
Q 015424 211 AACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--C--KEFIVDAW-QIYYARTKGADAVLLIAAVLPDLDIRYMTKICK 285 (407)
Q Consensus 211 A~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL--~--KDFIid~~-QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~ 285 (407)
+.++=|-+ +-|...+++-++.+++. .+.+|+ . -|.--+.. .+..+..+|||.|.+-+ ....+-++.+.+.++
T Consensus 50 v~~vKVG~-~lf~~~G~~~V~~Lk~~-~g~~IflDlKl~DIpnTv~~av~~~a~lGaD~vTVHa-~~G~~~m~aa~e~a~ 126 (303)
T 3ru6_A 50 DIWLKVGL-RAYLRDGFKFIEELKKV-DDFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHA-SAGKIAIQEVMTRLS 126 (303)
T ss_dssp SCEEEECH-HHHHHHTHHHHHHHHHH-CCCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEG-GGCHHHHHHHHHHHT
T ss_pred ccEEEeCH-HHHHHhCHHHHHHHHHh-hCCCEEEEeeeccCchhHHHHHHHHHhcCCCEEEEec-cCCHHHHHHHHHHHH
Confidence 45555533 23334456777888864 356776 2 34322222 24445678999999854 445667888888776
Q ss_pred HcCC--cEE-E-Ee-C-CHHHHHH----------------HhcccCCcEEEeeccccccccccccccccccCchhHHHHh
Q 015424 286 LLGL--TAL-V-EV-H-DEREMDR----------------VLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLL 343 (407)
Q Consensus 286 ~LGL--~aL-V-EV-h-t~eEler----------------Al~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~ 343 (407)
+.|- ..+ | .. + +.+++.. +.+. |.+ |+-- .......+.
T Consensus 127 ~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~-G~d--GvV~-----------------s~~E~~~IR 186 (303)
T 3ru6_A 127 KFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYEN-GLD--GMVC-----------------SVFESKKIK 186 (303)
T ss_dssp TSSSCCEEEEECSCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHT-TCS--EEEC-----------------CTTTHHHHH
T ss_pred hcCCCceEEEEEEecCCCHHHHHHHHcCCHHHHHHHHHHHHHHc-CCC--EEEE-----------------CHHHHHHHH
Confidence 6542 111 1 11 2 2333321 1121 322 2110 011123333
Q ss_pred hcccccccccCCceEEEeeCCCCHH----------HHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 344 EGERGEIIRQKNIIVVGESGLFTPD----------DIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 344 ~~~~~~~i~~~~v~vVAESGI~t~e----------D~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
+. . +.+ .++.-.||.-.. .+..+.++|+|.++||.+|++++||.++++++..
T Consensus 187 ~~-----~-~~~-fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a~dp~~a~~~i~~ 248 (303)
T 3ru6_A 187 EH-----T-SSN-FLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILN 248 (303)
T ss_dssp HH-----S-CTT-SEEEECCCCTTC--------CCSHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHH
T ss_pred Hh-----C-CCc-cEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHH
Confidence 32 1 233 455567775210 3456678999999999999999999998887754
No 324
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=93.60 E-value=0.28 Score=47.97 Aligned_cols=87 Identities=11% Similarity=0.146 Sum_probs=55.5
Q ss_pred CCCHHHHHHHHhcCCCCcEE--eccccCCHHHHHHHHHcCCCEEEEeccCCC---HHH-HHHHHHHHHHcCCcEEEEeCC
Q 015424 224 KGSFENLEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLP---DLD-IRYMTKICKLLGLTALVEVHD 297 (407)
Q Consensus 224 ~Gs~edL~~Vr~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL~---~~~-L~~Li~~a~~LGL~aLVEVht 297 (407)
+-+++.|..+++. +++||+ .-..|-++.+..++..+|||+|+++.+++. +.. .+.|.+....+ .|
T Consensus 184 ~ad~elI~~Ike~-~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Akafv~Av~~~--------~~ 254 (291)
T 3o07_A 184 RVPVSLLKDVLEK-GKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATAVVEATTHF--------DN 254 (291)
T ss_dssp TSCHHHHHHHHHH-TSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHTT--------TC
T ss_pred CCCHHHHHHHHHc-cCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHHHHHHHHHhc--------cC
Confidence 4578889999987 899996 467778999999999999999999999985 332 33344433332 45
Q ss_pred HHHHHHHh-cccCCcEEEeecccc
Q 015424 298 EREMDRVL-GIEGIELIGINNRNL 320 (407)
Q Consensus 298 ~eElerAl-~l~Ga~iIGINnRdL 320 (407)
.+-+..+- .+ |-.+.|+|..+|
T Consensus 255 ~~~~~~~s~~l-~~~m~g~~~~~~ 277 (291)
T 3o07_A 255 PSKLLEVSSDL-GELMGGVSIESI 277 (291)
T ss_dssp HHHHHHHHSSC-CCC---------
T ss_pred HHHHHHHHhcc-cccccCcchhhh
Confidence 55554443 44 667999987766
No 325
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=93.60 E-value=2.1 Score=41.02 Aligned_cols=164 Identities=12% Similarity=0.075 Sum_probs=96.5
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCH-HHHHHHH---hc-CCCCcEEeccccCCHHH-H---HHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSF-ENLEAVR---SA-GVKCPLLCKEFIVDAWQ-I---YYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~-edL~~Vr---~a-~v~lPVL~KDFIid~~Q-I---~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-++. -..++.=|. |..+.++ +. .-.+||+..=.-.+..+ | ..|..+|||+|++..
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (292)
T 2ojp_A 25 KKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVT 104 (292)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECC
Confidence 3556667789999999872 112222233 2333222 21 23689997654444443 3 335578999999988
Q ss_pred cCC---CHHHHHHHH-HHHHHcCCcEEEEe--------CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCch
Q 015424 270 AVL---PDLDIRYMT-KICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 270 aiL---~~~~L~~Li-~~a~~LGL~aLVEV--------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
-.. +++.+...+ ..+...++..++=- =+.+.+.+..+. ..++|| ++-.-|+.
T Consensus 105 P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgi--------------K~s~gd~~ 168 (292)
T 2ojp_A 105 PYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKV--KNIIGI--------------XEATGNLT 168 (292)
T ss_dssp CCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHTS--TTEEEC---------------CCSCCTH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHcC--CCEEEE--------------eCCCCCHH
Confidence 754 555554443 44555677665421 145556565554 579999 55556777
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
...+++... +++..+ -+|-. +.+-....+|++|++-|.+=+-
T Consensus 169 ~~~~~~~~~------~~~f~v--~~G~d--~~~~~~l~~G~~G~is~~~n~~ 210 (292)
T 2ojp_A 169 RVNQIKELV------SDDFVL--LSGDD--ASALDFMQYGGHGVISVTANVA 210 (292)
T ss_dssp HHHHHHTTS------CTTSBC--EESCG--GGHHHHHHTTCCEEEESGGGTC
T ss_pred HHHHHHHhc------CCCEEE--EECcH--HHHHHHHHCCCcEEEeCHHHhh
Confidence 777877542 234444 34432 2244556799999999877553
No 326
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=93.57 E-value=1.8 Score=39.29 Aligned_cols=191 Identities=13% Similarity=0.091 Sum_probs=111.0
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCC----------cCCCCHHHHHHHHh----cCCCCcEEecc--ccCCHH--HHHHHH
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEK----------YFKGSFENLEAVRS----AGVKCPLLCKE--FIVDAW--QIYYAR 258 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~----------~F~Gs~edL~~Vr~----a~v~lPVL~KD--FIid~~--QI~eAr 258 (407)
.++.+..+...+.|..+|-+..... -..-+.+++..+|+ .+..+..+.-. ...+.+ .+..|.
T Consensus 22 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~ 101 (262)
T 3p6l_A 22 FPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAK 101 (262)
T ss_dssp SCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHH
Confidence 4677778888888888888765431 12234555665553 22222223211 122332 467789
Q ss_pred HcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCC-------HHHHHHHhcccCCcEEEeeccccccccccccccc
Q 015424 259 TKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHD-------EREMDRVLGIEGIELIGINNRNLAISIFSYRTET 331 (407)
Q Consensus 259 ~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht-------~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~T 331 (407)
.+||+.|.+.. ..+.++++.+.|++.|+...+|.|. .+++.+.++. +.+-+|++- |. ++.. .
T Consensus 102 ~lGa~~v~~~~---~~~~~~~l~~~a~~~gv~l~~En~~~~~~~~~~~~~~~ll~~-~~~~~g~~~-D~-~h~~-----~ 170 (262)
T 3p6l_A 102 AMDLEFITCEP---ALSDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAISG-RSQSLGSCS-DV-GHWR-----R 170 (262)
T ss_dssp HTTCSEEEECC---CGGGHHHHHHHHHHHTCEEEEECCSSSSSSSSHHHHHHHHTT-SCTTEEEEE-EH-HHHH-----H
T ss_pred HcCCCEEEecC---CHHHHHHHHHHHHHhCCEEEEEeCCCccccCCHHHHHHHHHh-CCCceEEEe-ch-HHHH-----h
Confidence 99999999864 3467899999999999999999884 4677777774 556777743 22 0000 0
Q ss_pred cccCchhHHH-Hhhccccccccc----------CCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHH
Q 015424 332 FEVDNSNTKK-LLEGERGEIIRQ----------KNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGIT 398 (407)
Q Consensus 332 f~vDl~~t~~-L~~~~~~~~i~~----------~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~ 398 (407)
...|+....+ +.+.+..-++.. .....+.+|-|.=.+-++.+.+.|+++.++=|.-....++...++
T Consensus 171 ~g~d~~~~l~~~~~~i~~vH~~D~~~~~~~~~~~~~~~~G~G~id~~~~~~~l~~~gy~g~~~~E~~~~~~~~~~~~~ 248 (262)
T 3p6l_A 171 EGLNQIDCLKQLKGRIISLHFKDIAPKKAGENEQHDVIWGTGILDVKGMLKELKSQNFKGVFSIEYEYNWENSVPDIK 248 (262)
T ss_dssp TTCCHHHHHHHTTTCEEEEEECEECCCCTTCSCCCEECTTSSSSCHHHHHHHHHHTTCCEEEEECCCSSTTSCHHHHH
T ss_pred cCCCHHHHHHHHhhhheEEeeccCCccccCcCccccCCCCCCccCHHHHHHHHHHCCCCeEEEEEeccCcCChHHHHH
Confidence 1123322222 222111101100 011233455565566677888999999888887655556655443
No 327
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=93.55 E-value=0.72 Score=44.32 Aligned_cols=160 Identities=12% Similarity=0.018 Sum_probs=100.2
Q ss_pred CCceEEEEecccCCCc----CCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHH----HHHhcCCCCcEEecc
Q 015424 175 GLPALIAEVKKASPSR----GILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLE----AVRSAGVKCPLLCKE 246 (407)
Q Consensus 175 ~~~~vIAEvKraSPSk----G~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~----~Vr~a~v~lPVL~KD 246 (407)
.++.||.|+=..+|-+ |.......+.+.|+.+.+.||+-|=|..+.. -....+.+. .+++. +++||----
T Consensus 8 ~~~~iigEilN~Tpdsf~dg~~~~~~~~a~~~a~~~v~~GAdiIDIg~~s~-~~eE~~rv~~vi~~l~~~-~~~pisIDT 85 (271)
T 2yci_X 8 HMFIMIGERINGMFKDIREAILNKDPRPIQEWARRQAEKGAHYLDVNTGPT-ADDPVRVMEWLVKTIQEV-VDLPCCLDS 85 (271)
T ss_dssp CCCEEEEEEEETTSHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEECCSC-SSCHHHHHHHHHHHHHHH-CCCCEEEEC
T ss_pred CCCEEEEEecCCChhhHHHhhhhCCHHHHHHHHHHHHHCCCCEEEEcCCcC-chhHHHHHHHHHHHHHHh-CCCeEEEeC
Confidence 4578999999888742 2223345688889999999999999987652 111233333 33444 688875433
Q ss_pred ccCCHHHHHHHHHc--CCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCC------------HHHHHHHhcccCCcE
Q 015424 247 FIVDAWQIYYARTK--GADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHD------------EREMDRVLGIEGIEL 312 (407)
Q Consensus 247 FIid~~QI~eAr~~--GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht------------~eElerAl~l~Ga~i 312 (407)
.++.-+.+|..+ |++.|.=+... .+.+.++...+.++|..+++- |. .+.+++.++. +.-
T Consensus 86 --~~~~v~~aal~a~~Ga~iINdvs~~--~d~~~~~~~~~a~~~~~vv~m-~~d~~G~p~t~~~~~~~l~~~~~~--a~~ 158 (271)
T 2yci_X 86 --TNPDAIEAGLKVHRGHAMINSTSAD--QWKMDIFFPMAKKYEAAIIGL-TMNEKGVPKDANDRSQLAMELVAN--ADA 158 (271)
T ss_dssp --SCHHHHHHHHHHCCSCCEEEEECSC--HHHHHHHHHHHHHHTCEEEEE-SCBTTBCCCSHHHHHHHHHHHHHH--HHH
T ss_pred --CCHHHHHHHHHhCCCCCEEEECCCC--ccccHHHHHHHHHcCCCEEEE-ecCCCCCCCCHHHHHHHHHHHHHH--HHH
Confidence 356666677888 99988755433 245678889999999965554 43 3344333332 223
Q ss_pred EEeec-cccccccccccccccccCchhHHHHh
Q 015424 313 IGINN-RNLAISIFSYRTETFEVDNSNTKKLL 343 (407)
Q Consensus 313 IGINn-RdL~~~~~~~t~~Tf~vDl~~t~~L~ 343 (407)
.||.. +-++.|+.++-.++++-+++....+.
T Consensus 159 ~Gi~~~~IilDPg~gfigk~~~~~~~~l~~l~ 190 (271)
T 2yci_X 159 HGIPMTELYIDPLILPVNVAQEHAVEVLETIR 190 (271)
T ss_dssp TTCCGGGEEEECCCCCTTTSTHHHHHHHHHHH
T ss_pred CCCCcccEEEecCCCccccCHHHHHHHHHHHH
Confidence 45543 33456777775567776665555553
No 328
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=93.53 E-value=1.2 Score=42.24 Aligned_cols=177 Identities=19% Similarity=0.158 Sum_probs=99.2
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhc--CCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a--~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~ 275 (407)
+|. .++.....|+++|-+-.|. .-.+.+.+.....+ ....|++.+=.-.++.+|..+..+|+|+|++ -.+-+.+
T Consensus 28 ~p~-~~e~a~~~GaD~v~lDlE~--~~~~~~~~~~~~~a~~~~~~~~~VRv~~~~~~~i~~~l~~g~~~I~~-P~V~s~e 103 (267)
T 2vws_A 28 TAY-MAEIAATSGYDWLLIDGEH--APNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLI-PMVDTAE 103 (267)
T ss_dssp CHH-HHHHHHTTCCSEEEEETTT--SCCCHHHHHHHHHHHTTSSSEEEEECSSCCHHHHHHHHHTTCCEEEE-CCCCSHH
T ss_pred CHH-HHHHHHhCCCCEEEEcCCC--CCCCHHHHHHHHHHHHhCCCcEEEEeCCCCHHHHHHHHHhCCCEEEe-CCCCCHH
Confidence 444 4455667799977554332 23344444433221 1245554332246799999999999998876 6666778
Q ss_pred HHHHHHHHHHH-----------------cC------------CcEEEEeCCHHHHH---HHhcccCCcEEEeeccccccc
Q 015424 276 DIRYMTKICKL-----------------LG------------LTALVEVHDEREMD---RVLGIEGIELIGINNRNLAIS 323 (407)
Q Consensus 276 ~L~~Li~~a~~-----------------LG------------L~aLVEVht~eEle---rAl~l~Ga~iIGINnRdL~~~ 323 (407)
+++.+.+.++. +| +.+++-+-|.+-++ ..+..+|.+.+.|-.-||...
T Consensus 104 e~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~~~~eIa~~~gvd~l~iG~~DL~~~ 183 (267)
T 2vws_A 104 QARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSAS 183 (267)
T ss_dssp HHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHHTHHHHHTSTTCCEEEECHHHHHHH
T ss_pred HHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHHHHHHHhCCCCCCEEEEChHHHHHH
Confidence 88888776531 12 34444444444433 333435678887777788544
Q ss_pred cccccccccccCchhH-HHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEccc
Q 015424 324 IFSYRTETFEVDNSNT-KKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 386 (407)
Q Consensus 324 ~~~~t~~Tf~vDl~~t-~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 386 (407)
.. +........+... .+++...+. .++.+..- ..+++.+..+.+.|++.+.+|..
T Consensus 184 lg-~~~~~~~p~v~~a~~~iv~aa~a-----aG~~~~v~--~~d~~~a~~~~~~G~~~~s~~~d 239 (267)
T 2vws_A 184 LG-YPDNAGHPEVQRIIETSIRRIRA-----AGKAAGFL--AVAPDMAQQCLAWGANFVAVGVD 239 (267)
T ss_dssp TT-CSSSCCTHHHHHHHHHHHHHHHH-----TTCEEEEE--CSSHHHHHHHHHTTCCEEEEEEH
T ss_pred hC-CCCCCCCHHHHHHHHHHHHHHHH-----hCCeEEEe--cCCHHHHHHHHHCCCCEEEEchH
Confidence 32 2111111112111 222222111 23333222 24899999999999999999964
No 329
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=93.52 E-value=2.5 Score=40.90 Aligned_cols=166 Identities=18% Similarity=0.144 Sum_probs=96.5
Q ss_pred HHHHHHHHcCCcEEEEEe-cCCcCCCCH-HHHHHHH---hc-CCCCcEEeccccCCHH----HHHHHHHcCCCEEEEecc
Q 015424 201 EIARSYEKGGAACLSILT-DEKYFKGSF-ENLEAVR---SA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIAA 270 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVLT-d~~~F~Gs~-edL~~Vr---~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLiaa 270 (407)
++++.+.+.|+++|-++. -..++.=|. |..+.++ +. .-.+||+..=.-.+.. +...|..+|||+|++..-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 456667889999998872 222222233 3333222 21 2369999765444444 234467889999999887
Q ss_pred CC---CHHHHHHH-HHHHHHcCCcEEEEe--------CCHHHHHHHh-cccCCcEEEeeccccccccccccccccccCch
Q 015424 271 VL---PDLDIRYM-TKICKLLGLTALVEV--------HDEREMDRVL-GIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 271 iL---~~~~L~~L-i~~a~~LGL~aLVEV--------ht~eElerAl-~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
.. +++.+... -..+...++.+++=- =+.+.+.+.. +. ..++|| ++-.-|+.
T Consensus 117 ~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pnIvgi--------------Kdssgd~~ 180 (306)
T 1o5k_A 117 YYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAADL--KNVVGI--------------XEANPDID 180 (306)
T ss_dssp CSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHHC--TTEEEE--------------EECCCCHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHhC--CCEEEE--------------eCCCCCHH
Confidence 55 55555443 344555677665421 1455566655 44 579999 44445777
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
...+++...+.. ..++.+ -+|-. +.+.....+|++|++-|.+=+-
T Consensus 181 ~~~~~~~~~~~~---~~~f~v--~~G~d--~~~l~~l~~G~~G~is~~an~~ 225 (306)
T 1o5k_A 181 QIDRTVSLTKQA---RSDFMV--WSGND--DRTFYLLCAGGDGVISVVSNVA 225 (306)
T ss_dssp HHHHHHHHHHHH---CTTCEE--EESSG--GGHHHHHHHTCCEEEESGGGTC
T ss_pred HHHHHHHhcCCC---CCcEEE--EECcH--HHHHHHHHCCCCEEEecHHHhh
Confidence 777776542100 014334 34442 2355566789999999877553
No 330
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=93.45 E-value=2.8 Score=40.47 Aligned_cols=162 Identities=13% Similarity=0.066 Sum_probs=96.1
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCHH-HHHHH---Hh-cCCCCcEEeccccCCHH----HHHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSFE-NLEAV---RS-AGVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~e-dL~~V---r~-a~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-|+. -..++.=|.+ ..+.+ ++ ..-.+||+..=.-.+.. +...|..+|||+|++..
T Consensus 35 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 35 RRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecC
Confidence 4556667899999999872 1222222333 22222 22 12379999754434443 23446788999999988
Q ss_pred cCC---CHHHHHH-HHHHHHHcC-CcEEE-Ee-------CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCc
Q 015424 270 AVL---PDLDIRY-MTKICKLLG-LTALV-EV-------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDN 336 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LG-L~aLV-EV-------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl 336 (407)
-.. +++.+.. +-..+...+ +.+++ .+ =+.+.+.+..+. ..++|| ++-.-|+
T Consensus 115 P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgi--------------K~s~gd~ 178 (303)
T 2wkj_A 115 PFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTL--PGVGAL--------------XQTSGDL 178 (303)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHTS--TTEEEE--------------EECCCCH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhcC--CCEEEE--------------eCCCCCH
Confidence 754 5555544 445566667 77755 21 145566665554 579999 4445577
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEccccc
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIV 388 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLm 388 (407)
....+++.. .+++.+. +|-. +.+.....+|++|++-|.+=+
T Consensus 179 ~~~~~~~~~-------~~~f~v~--~G~d--~~~~~~l~~G~~G~is~~an~ 219 (303)
T 2wkj_A 179 YQMEQIRRE-------HPDLVLY--NGYD--NIFASGLLAGADGGIGSTYNI 219 (303)
T ss_dssp HHHHHHHHH-------CTTCEEE--ECCG--GGHHHHHHHTCCEEEETTHHH
T ss_pred HHHHHHHHh-------CCCeEEE--eCcH--HHHHHHHHCCCCEEEeCHHHh
Confidence 777777653 1243333 3332 235556678999999886533
No 331
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=93.39 E-value=1.6 Score=42.21 Aligned_cols=161 Identities=13% Similarity=0.140 Sum_probs=94.7
Q ss_pred HHHHHHHHHcCCcEEEEE-ecCCcCCCCHHH-HHHHH---hc-CCCCcEEeccccCCHH----HHHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFEN-LEAVR---SA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVL-Td~~~F~Gs~ed-L~~Vr---~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-|+ |-.+++.=+.+. .+.++ +. .-.+||+..=.-.+.. +...|..+|||+|+++.
T Consensus 39 ~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 39 ARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 344566778999999887 212222223332 22222 21 2478999764434443 23456788999999997
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEEe--------CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCch
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNS 337 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVEV--------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~ 337 (407)
-.. +++.+.. +...+...++.+++=- =+.+.+.+..+. ..++|| ++-.-|+.
T Consensus 119 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgi--------------Kdssgd~~ 182 (304)
T 3l21_A 119 PYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASH--PNIVGV--------------XDAKADLH 182 (304)
T ss_dssp CCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHTS--TTEEEE--------------EECSCCHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcC--CCEEEE--------------ECCCCCHH
Confidence 653 4555444 4444555677765431 145566665554 479999 44455777
Q ss_pred hHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEccccc
Q 015424 338 NTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIV 388 (407)
Q Consensus 338 ~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLm 388 (407)
...+++.. .+..++ +|-. +.+.....+|++|++-|.+=+
T Consensus 183 ~~~~~~~~--------~~f~v~--~G~d--~~~l~~l~~Ga~G~is~~~n~ 221 (304)
T 3l21_A 183 SGAQIMAD--------TGLAYY--SGDD--ALNLPWLRMGATGFISVIAHL 221 (304)
T ss_dssp HHHHHHHH--------HCCEEE--ESSG--GGHHHHHHHTCCEEEESTHHH
T ss_pred HHHHHhcC--------CCeEEE--eCch--HHHHHHHHcCCCEEEecHHhh
Confidence 77776531 344443 5542 234566789999998776543
No 332
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=93.37 E-value=0.12 Score=51.68 Aligned_cols=44 Identities=18% Similarity=0.156 Sum_probs=40.1
Q ss_pred CceEEEeeCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHh
Q 015424 355 NIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITG 399 (407)
Q Consensus 355 ~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~ 399 (407)
++++|+-||| |++++..+.+.| ||.|.+|.+++..+|...++++
T Consensus 287 ~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~ladPdl~~k~~~ 331 (361)
T 3gka_A 287 GGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIANPDLPRRFKL 331 (361)
T ss_dssp CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHh
Confidence 4579999999 999999999998 9999999999999998887765
No 333
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=93.35 E-value=5.8 Score=37.93 Aligned_cols=160 Identities=17% Similarity=0.106 Sum_probs=95.4
Q ss_pred HHHHHHHHH-cCCcEEEEEe-cCCcCCCCH-HHHHHHH---h-cCCCCcEEeccccCCHHH----HHHHHHcCCCEEEEe
Q 015424 200 VEIARSYEK-GGAACLSILT-DEKYFKGSF-ENLEAVR---S-AGVKCPLLCKEFIVDAWQ----IYYARTKGADAVLLI 268 (407)
Q Consensus 200 ~~iA~ay~~-~GA~aISVLT-d~~~F~Gs~-edL~~Vr---~-a~v~lPVL~KDFIid~~Q----I~eAr~~GADaVLLi 268 (407)
.++++.+.+ .|+++|-++. -..++.=|. |..+.++ + ..-.+||+..=.-.+..+ ...|..+|||+|++.
T Consensus 27 ~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 106 (293)
T 1f6k_A 27 RQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAV 106 (293)
T ss_dssp HHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 345566778 9999998872 222222233 3333222 2 123699997654444442 344678899999999
Q ss_pred ccCC---CHHHHHH-HHHHHHHcCCcEEEE-------e-CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCc
Q 015424 269 AAVL---PDLDIRY-MTKICKLLGLTALVE-------V-HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDN 336 (407)
Q Consensus 269 aaiL---~~~~L~~-Li~~a~~LGL~aLVE-------V-ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl 336 (407)
.-.. +++.+.. +-..+...++..++= + =+.+.+.+..+. ..++|| ++-.-|+
T Consensus 107 ~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgi--------------K~s~gd~ 170 (293)
T 1f6k_A 107 TPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYKN--PKVLGV--------------KFTAGDF 170 (293)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHTS--TTEEEE--------------EECSCCH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhcC--CCEEEE--------------EECCCCH
Confidence 8755 5555444 445566667766542 1 145566665554 579999 4445577
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEccc
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 386 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 386 (407)
....+++.. .++..+. +|-.. .+-....+|++|++-|.+
T Consensus 171 ~~~~~~~~~-------~~~f~v~--~G~d~--~~~~~l~~G~~G~is~~~ 209 (293)
T 1f6k_A 171 YLLERLKKA-------YPNHLIW--AGFDE--MMLPAASLGVDGAIGSTF 209 (293)
T ss_dssp HHHHHHHHH-------CTTSEEE--ECCGG--GHHHHHHTTCSEEEESTH
T ss_pred HHHHHHHHh-------CCCeEEE--ECcHH--HHHHHHHCCCcEEEeCHH
Confidence 777777653 1243333 34322 355667789999998875
No 334
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=93.32 E-value=0.53 Score=46.83 Aligned_cols=119 Identities=11% Similarity=0.098 Sum_probs=87.0
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....|.++.- .| +. ..+..++++.+++.|...| |+.+-..+++.+..+|+. +++||
T Consensus 183 ~v~avR~a~--g~~~~l~vDan-----~~-~~-~~~A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 248 (383)
T 3i4k_A 183 RVAELAREV--GDRVSLRIDIN-----AR-WD-RRTALHYLPILAEAGVELF----EQPTPADDLETLREITRR-TNVSV 248 (383)
T ss_dssp HHHHHHHTT--TTTSEEEEECT-----TC-SC-HHHHHHHHHHHHHTTCCEE----ESCSCTTCHHHHHHHHHH-HCCEE
T ss_pred HHHHHHHHc--CCCCEEEEECC-----CC-CC-HHHHHHHHHHHHhcCCCEE----ECCCChhhHHHHHHHHhh-CCCCE
Confidence 345666543 12356777751 12 22 2245567888999886554 345566789999999986 79999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEEe
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVEV 295 (407)
...+-+.+++++.+....| +|.|.+....+. -.+...+...|+..|+.+++-.
T Consensus 249 a~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 303 (383)
T 3i4k_A 249 MADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGAT 303 (383)
T ss_dssp EESTTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred EecCccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeCC
Confidence 9999999999998887765 899999888774 4577888899999999987654
No 335
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=93.30 E-value=1.2 Score=40.98 Aligned_cols=123 Identities=13% Similarity=0.129 Sum_probs=76.9
Q ss_pred HHHHHHhcCCCCcEEeccccCCHHHH-HHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEE---eCCHHHHHHH
Q 015424 229 NLEAVRSAGVKCPLLCKEFIVDAWQI-YYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE---VHDEREMDRV 304 (407)
Q Consensus 229 dL~~Vr~a~v~lPVL~KDFIid~~QI-~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVE---Vht~eElerA 304 (407)
-+..+++. -=+||++.+=.-+..++ ..+...|++.|=+...-... ++.+-+.+++++ +.++. |.+.++++.|
T Consensus 9 ~~~~l~~~-~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~--~~~i~~l~~~~~-~~~vgagtvi~~d~~~~A 84 (214)
T 1wbh_A 9 AESILTTG-PVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECA--VDAIRAIAKEVP-EAIVGAGTVLNPQQLAEV 84 (214)
T ss_dssp HHHHHHSC-SEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTH--HHHHHHHHHHCT-TSEEEEESCCSHHHHHHH
T ss_pred HHHHHHHC-CEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhH--HHHHHHHHHHCc-CCEEeeCEEEEHHHHHHH
Confidence 34556654 34788887544444554 44678899998887544333 333333666664 33332 4678999999
Q ss_pred hcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEE
Q 015424 305 LGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLV 383 (407)
Q Consensus 305 l~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLV 383 (407)
+++ ||+.|-.-+ .|.+.. +.... .++.++- |++|++++.++.++|+|.|-+
T Consensus 85 ~~a-GAd~v~~p~----------------~d~~v~-~~~~~--------~g~~~i~--G~~t~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 85 TEA-GAQFAISPG----------------LTEPLL-KAATE--------GTIPLIP--GISTVSELMLGMDYGLKEFKF 135 (214)
T ss_dssp HHH-TCSCEEESS----------------CCHHHH-HHHHH--------SSSCEEE--EESSHHHHHHHHHTTCCEEEE
T ss_pred HHc-CCCEEEcCC----------------CCHHHH-HHHHH--------hCCCEEE--ecCCHHHHHHHHHCCCCEEEE
Confidence 997 999774321 233222 22221 1233333 599999999999999999877
No 336
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=93.29 E-value=0.15 Score=50.78 Aligned_cols=76 Identities=18% Similarity=0.120 Sum_probs=60.1
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCC----CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCC
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKG----SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL 272 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~G----s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL 272 (407)
+..++|+.+++.|++.|+|-.- . +.| ..+.++.+|+. +++||+.-..| ++.+..++...| ||.|.+.-.++
T Consensus 251 ~~~~~a~~l~~~G~d~i~v~~~-~-~~~~~~~~~~~~~~i~~~-~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i 326 (365)
T 2gou_A 251 TYTAAAALLNKHRIVYLHIAEV-D-WDDAPDTPVSFKRALREA-YQGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPFI 326 (365)
T ss_dssp HHHHHHHHHHHTTCSEEEEECC-B-TTBCCCCCHHHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCC-C-cCCCCCccHHHHHHHHHH-CCCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHHH
Confidence 4567799999999999999641 1 111 25678889987 89999987766 899999999998 99999988887
Q ss_pred CHHHH
Q 015424 273 PDLDI 277 (407)
Q Consensus 273 ~~~~L 277 (407)
.+.++
T Consensus 327 ~~P~l 331 (365)
T 2gou_A 327 ANPDL 331 (365)
T ss_dssp HCTTH
T ss_pred hCchH
Confidence 65555
No 337
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=93.29 E-value=0.39 Score=47.37 Aligned_cols=120 Identities=14% Similarity=0.094 Sum_probs=86.1
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....|....- .|. . ..+..++++.+++.|...| |+.+-..+++.++.+++. +++||
T Consensus 189 ~v~avr~a~--g~d~~l~vDan-----~~~-~-~~~a~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~iPI 254 (382)
T 1rvk_A 189 ACAAVREAV--GPDIRLMIDAF-----HWY-S-RTDALALGRGLEKLGFDWI----EEPMDEQSLSSYKWLSDN-LDIPV 254 (382)
T ss_dssp HHHHHHHHH--CTTSEEEEECC-----TTC-C-HHHHHHHHHHHHTTTCSEE----ECCSCTTCHHHHHHHHHH-CSSCE
T ss_pred HHHHHHHHh--CCCCeEEEECC-----CCC-C-HHHHHHHHHHHHhcCCCEE----eCCCChhhHHHHHHHHhh-CCCCE
Confidence 344555542 12456776652 122 1 1245567888888887654 444556789999999987 89999
Q ss_pred EeccccCC-HHHHHHHHHcC-CCEEEEeccCC-CHHHHHHHHHHHHHcCCcEEEEeC
Q 015424 243 LCKEFIVD-AWQIYYARTKG-ADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEVH 296 (407)
Q Consensus 243 L~KDFIid-~~QI~eAr~~G-ADaVLLiaaiL-~~~~L~~Li~~a~~LGL~aLVEVh 296 (407)
...+-+.+ ++++.++...| +|.|.+..... .-.+..++.+.|+..|+.+++-+-
T Consensus 255 a~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~ 311 (382)
T 1rvk_A 255 VGPESAAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECEVHGN 311 (382)
T ss_dssp EECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCC
T ss_pred EEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 99999999 99998887665 89999977655 445677889999999999887743
No 338
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=93.28 E-value=0.21 Score=47.35 Aligned_cols=45 Identities=20% Similarity=0.125 Sum_probs=38.4
Q ss_pred HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCC
Q 015424 227 FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 227 ~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (407)
.+.++.+|+. +++||.....|-++.|+.++..+|||+|+.+.++.
T Consensus 194 ~~~i~~lr~~-~~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~ 238 (268)
T 1qop_A 194 HHLIEKLKEY-HAAPALQGFGISSPEQVSAAVRAGAAGAISGSAIV 238 (268)
T ss_dssp HHHHHHHHHT-TCCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHhc-cCCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 6889999986 79998885555559999999999999999998875
No 339
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=93.27 E-value=3.6 Score=40.08 Aligned_cols=167 Identities=16% Similarity=0.145 Sum_probs=98.0
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCHH-HHHHHH---hc-CCCCcEEeccccCCHHH----HHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSFE-NLEAVR---SA-GVKCPLLCKEFIVDAWQ----IYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~e-dL~~Vr---~a-~v~lPVL~KDFIid~~Q----I~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-|+. -..++.=+.+ ..+.++ +. .-.+||+..=.-.+..+ ...|..+|||+|+++.
T Consensus 35 ~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 114 (318)
T 3qfe_A 35 ERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLP 114 (318)
T ss_dssp HHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 3456667889999999872 2222222333 333332 21 24799997554444442 3456788999999988
Q ss_pred c-C----CCHHHHH-HHHHHHHHcCCcEEEE--------e-CCHHHHHHHhc-ccCCcEEEeeccccccccccccccccc
Q 015424 270 A-V----LPDLDIR-YMTKICKLLGLTALVE--------V-HDEREMDRVLG-IEGIELIGINNRNLAISIFSYRTETFE 333 (407)
Q Consensus 270 a-i----L~~~~L~-~Li~~a~~LGL~aLVE--------V-ht~eElerAl~-l~Ga~iIGINnRdL~~~~~~~t~~Tf~ 333 (407)
- . .+++.+. ++...+...++..++= + =+.+-+.+..+ . ..|+|| ++-.
T Consensus 115 P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~--pnIvgi--------------Kdss 178 (318)
T 3qfe_A 115 PAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKN--PNVVGV--------------KLTC 178 (318)
T ss_dssp CCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHHHC--TTEEEE--------------EESS
T ss_pred CcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhC--CCEEEE--------------EeCC
Confidence 7 3 2455544 4555566667666431 1 13555656554 4 479999 4445
Q ss_pred cCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015424 334 VDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 391 (407)
Q Consensus 334 vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 391 (407)
-|+....+++...+ +.++.+. +|-. +.+.....+|++|++-|.+=+-+.
T Consensus 179 gd~~~~~~~~~~~~-----~~~f~v~--~G~d--~~~l~~l~~G~~G~is~~an~~P~ 227 (318)
T 3qfe_A 179 ASVGKITRLAATLP-----PAAFSVF--GGQS--DFLIGGLSVGSAGCIAAFANVFPK 227 (318)
T ss_dssp CCHHHHHHHHHHSC-----GGGCEEE--ESCG--GGHHHHHHTTCCEEECGGGGTCHH
T ss_pred CCHHHHHHHHHhcC-----CCCEEEE--EecH--HHHHHHHHCCCCEEEecHHHhhHH
Confidence 57777777765421 2233333 3432 234566789999999887755433
No 340
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=93.27 E-value=0.075 Score=53.26 Aligned_cols=72 Identities=25% Similarity=0.165 Sum_probs=56.1
Q ss_pred HHHHHHHHHcCCcEEEEEe--cCCc--CCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCC
Q 015424 200 VEIARSYEKGGAACLSILT--DEKY--FKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT--d~~~--F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (407)
.+.|+.+.+.||++|.|-. -..+ ...+++.+..+++. ++.||+.-..|.+..++.++..+|||+|.+...++
T Consensus 236 ~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~-~~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l 311 (380)
T 1p4c_A 236 AEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAK-TGKPVLIDSGFRRGSDIVKALALGAEAVLLGRATL 311 (380)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHH-HCSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHH-cCCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHH
Confidence 4678999999999999921 1111 11235677788876 67899999999999999999999999999987665
No 341
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=93.27 E-value=0.32 Score=48.38 Aligned_cols=94 Identities=9% Similarity=-0.013 Sum_probs=75.0
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCC-CHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL-~~~ 275 (407)
+..++++.+++.|...| |+.+-..+++.++.+|+. +++||...+-+.++.++.++...| +|.|.+-.... .-.
T Consensus 209 ~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 283 (391)
T 2qgy_A 209 QTKSFLKEVSSFNPYWI----EEPVDGENISLLTEIKNT-FNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLI 283 (391)
T ss_dssp HHHHHHHHHGGGCCSEE----ECSSCTTCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHH
T ss_pred HHHHHHHHHHhcCCCeE----eCCCChhhHHHHHHHHhh-CCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHH
Confidence 45567888888887754 444556789999999987 899999999999999998887665 89998877766 445
Q ss_pred HHHHHHHHHHHcCCcEEEEeC
Q 015424 276 DIRYMTKICKLLGLTALVEVH 296 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVEVh 296 (407)
+...+.+.|+..|+.+++-+.
T Consensus 284 ~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 284 DIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp HHHHHHHHHHHTTCEECCBCC
T ss_pred HHHHHHHHHHHCCCEEeccCC
Confidence 677889999999998776543
No 342
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=93.23 E-value=0.12 Score=46.81 Aligned_cols=73 Identities=23% Similarity=0.204 Sum_probs=53.0
Q ss_pred CHHHHHHHHHHcCCcEEEE---E-ecC--C-cCCCCHHHHHHHHhcCCC-CcEEeccccCCHHHHHHHHHcCCCEEEEec
Q 015424 198 DPVEIARSYEKGGAACLSI---L-TDE--K-YFKGSFENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIA 269 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISV---L-Td~--~-~F~Gs~edL~~Vr~a~v~-lPVL~KDFIid~~QI~eAr~~GADaVLLia 269 (407)
++.+ ++.+.+.||+.|-+ . |.. . +...+++.++.+++. ++ +||+.-..|. +..+.++..+|||+|.++.
T Consensus 125 t~~e-~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~-~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs 201 (227)
T 2tps_A 125 TMSE-VKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQ-GISIPIVGIGGIT-IDNAAPVIQAGADGVSMIS 201 (227)
T ss_dssp SHHH-HHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHT-TCCCCEEEESSCC-TTTSHHHHHTTCSEEEESH
T ss_pred CHHH-HHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHh-CCCCCEEEEcCCC-HHHHHHHHHcCCCEEEEhH
Confidence 5666 45556779999876 1 211 1 122357888888875 67 9998866555 8889888899999999998
Q ss_pred cCCC
Q 015424 270 AVLP 273 (407)
Q Consensus 270 aiL~ 273 (407)
++..
T Consensus 202 ~i~~ 205 (227)
T 2tps_A 202 AISQ 205 (227)
T ss_dssp HHHT
T ss_pred Hhhc
Confidence 8774
No 343
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=93.18 E-value=2.8 Score=38.55 Aligned_cols=194 Identities=14% Similarity=0.064 Sum_probs=112.2
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHh-cCCCCcEEecc---cc--CCHH-----------HHHHHH
Q 015424 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRS-AGVKCPLLCKE---FI--VDAW-----------QIYYAR 258 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~-a~v~lPVL~KD---FI--id~~-----------QI~eAr 258 (407)
..+..+..+...+.|..+|-+.... +....+.++..-+ .+..+..++-. ++ .|+. .|..|.
T Consensus 37 ~~~~~~~l~~~~~~G~~~vEl~~~~--~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~ 114 (287)
T 3kws_A 37 GESLNEKLDFMEKLGVVGFEPGGGG--LAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAG 114 (287)
T ss_dssp CSSHHHHHHHHHHTTCCEEECBSTT--CGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEEecCCc--hHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3578888899999999999886552 2334444444433 22333334332 11 2331 456688
Q ss_pred HcCCCEEEEeccC------C--C-------HHHHHHHHHHHHHcCCcEEEEeC---------CHHHHHHHhcccCCcEEE
Q 015424 259 TKGADAVLLIAAV------L--P-------DLDIRYMTKICKLLGLTALVEVH---------DEREMDRVLGIEGIELIG 314 (407)
Q Consensus 259 ~~GADaVLLiaai------L--~-------~~~L~~Li~~a~~LGL~aLVEVh---------t~eElerAl~l~Ga~iIG 314 (407)
.+||+.|.+.... + . -+.|.++.+++++.|+...+|.| +.+++.+.++.-+.+-+|
T Consensus 115 ~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~ll~~v~~~~vg 194 (287)
T 3kws_A 115 ELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQVADAASLCRDINNPGVR 194 (287)
T ss_dssp HTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCHHHHHHHHHHHCCTTEE
T ss_pred HcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHcCCCCee
Confidence 9999999885431 1 1 24567778888889999999977 466776666532545678
Q ss_pred eeccccccccccccccccccCch-hHHHHhhcccccccccC-CceEEEeeC--CCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 315 INNRNLAISIFSYRTETFEVDNS-NTKKLLEGERGEIIRQK-NIIVVGESG--LFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 315 INnRdL~~~~~~~t~~Tf~vDl~-~t~~L~~~~~~~~i~~~-~v~vVAESG--I~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
++- |. ++.. ....|+. ....+.+.+.--++... +.....+|- |.=.+-+..+.+.|+++.++=|..-.
T Consensus 195 ~~~-D~-~h~~-----~~g~d~~~~l~~~~~~i~~vHlkD~~~r~~pG~G~d~id~~~i~~~L~~~gy~g~i~lE~~~~- 266 (287)
T 3kws_A 195 CMG-DF-WHMT-----WEETSDMGAFISGGEYLQHVHVASRKRRSMPGEDGDADNYINGFKGLKMIGYNNYVSFECGCQ- 266 (287)
T ss_dssp EEE-EH-HHHH-----HHCSCHHHHHHHHGGGEEEEEECCTTTSCSTTTTGGGCCCHHHHHHHHHTTCCSEEEECCCCS-
T ss_pred EEe-eh-HHHH-----hcCCCHHHHHHHhhhhEEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHcCCCccEEEEecCC-
Confidence 742 22 0000 0123442 22233332221111111 112224566 77777788899999999998887655
Q ss_pred CChHHHHHh
Q 015424 391 DDPGKGITG 399 (407)
Q Consensus 391 ~dp~~~i~~ 399 (407)
.||.+.+++
T Consensus 267 ~~~~~~~~~ 275 (287)
T 3kws_A 267 GDRNVVVPA 275 (287)
T ss_dssp SCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 577665554
No 344
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=93.17 E-value=0.26 Score=47.32 Aligned_cols=73 Identities=19% Similarity=0.081 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCC-------HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEecc
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGS-------FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs-------~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa 270 (407)
+...+.+....+ -.-|-+++-.+.+++. .+.++.+|+. +++||+..-.|-++.|+.++...|||+|+++.+
T Consensus 160 ~~eri~~i~~~~-~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~-~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSa 237 (267)
T 3vnd_A 160 DADTLKMVSEQG-EGYTYLLSRAGVTGTESKAGEPIENILTQLAEF-NAPPPLLGFGIAEPEQVRAAIKAGAAGAISGSA 237 (267)
T ss_dssp CHHHHHHHHHHC-CSCEEESCCCCCC--------CHHHHHHHHHTT-TCCCEEECSSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHhC-CCcEEEEecCCCCCCccCCcHHHHHHHHHHHHh-cCCCEEEECCcCCHHHHHHHHHcCCCEEEECHH
Confidence 344454444443 3335554444444442 3677888886 899999966666899999899999999999987
Q ss_pred CC
Q 015424 271 VL 272 (407)
Q Consensus 271 iL 272 (407)
+.
T Consensus 238 iv 239 (267)
T 3vnd_A 238 VV 239 (267)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 345
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=93.11 E-value=2 Score=41.09 Aligned_cols=165 Identities=11% Similarity=0.067 Sum_probs=97.1
Q ss_pred HHHHHHHHHHcCCcEEEEEe-cCCcCCCCH-HHHHHHH---hc-CCCCcEEeccccCCHH----HHHHHHHcCCCEEEEe
Q 015424 199 PVEIARSYEKGGAACLSILT-DEKYFKGSF-ENLEAVR---SA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLI 268 (407)
Q Consensus 199 p~~iA~ay~~~GA~aISVLT-d~~~F~Gs~-edL~~Vr---~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLi 268 (407)
..++++.+.+.|+++|-++. -..++.=+. |..+.++ +. .-.+||+..=.-.+.. +...|..+|||+|++.
T Consensus 24 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~ 103 (291)
T 3a5f_A 24 LSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVI 103 (291)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEc
Confidence 34556667889999998872 112222233 3333332 21 2369999765444444 2344678899999998
Q ss_pred ccCC---CHHHHHHHH-HHHHHcCCcEEEE-------e-CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCc
Q 015424 269 AAVL---PDLDIRYMT-KICKLLGLTALVE-------V-HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDN 336 (407)
Q Consensus 269 aaiL---~~~~L~~Li-~~a~~LGL~aLVE-------V-ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl 336 (407)
.-.. +++.+...+ ..+...++..++= + =+.+.+.+..+. ..++|| ++-.-|+
T Consensus 104 ~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgi--------------K~s~gd~ 167 (291)
T 3a5f_A 104 TPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCED--KNIVAV--------------XEASGNI 167 (291)
T ss_dssp CCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTTS--TTEEEE--------------EECSCCH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcC--CCEEEE--------------eCCCCCH
Confidence 8754 555544333 3345557766542 1 145556665554 579999 4445577
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
....+++... ++++.+ -+|-. +.+.....+|++|++-|.+=+-
T Consensus 168 ~~~~~~~~~~------~~~f~v--~~G~d--~~~~~~l~~G~~G~is~~an~~ 210 (291)
T 3a5f_A 168 SQIAQIKALC------GDKLDI--YSGND--DQIIPILALGGIGVISVLANVI 210 (291)
T ss_dssp HHHHHHHHHH------GGGSEE--EESCG--GGHHHHHHTTCCEEEESGGGTC
T ss_pred HHHHHHHHhc------CCCeEE--EeCcH--HHHHHHHHCCCCEEEecHHHhc
Confidence 7777776542 234333 34442 2244566799999999887553
No 346
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.11 E-value=2.4 Score=40.79 Aligned_cols=166 Identities=13% Similarity=0.108 Sum_probs=97.6
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEEe-----cCCcCCCCHHHH-HHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEe
Q 015424 195 EDFDPVEIARSYEKGGAACLSILT-----DEKYFKGSFENL-EAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLI 268 (407)
Q Consensus 195 ~~~dp~~iA~ay~~~GA~aISVLT-----d~~~F~Gs~edL-~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLi 268 (407)
...+-.++++...+.|...|=+-. +-+++ ++.+.+ +.+++. .++|+.. +.-+...|..|..+|+|.|.+.
T Consensus 28 ~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~-~d~~~~~~~~~~~-~~~~~~~--l~~~~~~i~~a~~aG~~~v~i~ 103 (302)
T 2ftp_A 28 EVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQM-AGSAEVFAGIRQR-PGVTYAA--LAPNLKGFEAALESGVKEVAVF 103 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGG-TTHHHHHHHSCCC-TTSEEEE--ECCSHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHcCcCEEEECCCcCccccccc-cCHHHHHHHhhhc-CCCEEEE--EeCCHHHHHHHHhCCcCEEEEE
Confidence 344677889999999999888753 11223 344332 222221 3445431 1135678999999999999874
Q ss_pred ccC----------CCH----HHHHHHHHHHHHcCCcEEEEe-----------CCHHHHHHHh----cccCCcEEEeeccc
Q 015424 269 AAV----------LPD----LDIRYMTKICKLLGLTALVEV-----------HDEREMDRVL----GIEGIELIGINNRN 319 (407)
Q Consensus 269 aai----------L~~----~~L~~Li~~a~~LGL~aLVEV-----------ht~eElerAl----~l~Ga~iIGINnRd 319 (407)
.+. ++. +.+.+.++++++.|+.+-+++ ++.+++.+.. ++ |++.|.+- |
T Consensus 104 ~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~-G~d~i~l~--D 180 (302)
T 2ftp_A 104 AAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQM-GCYEVSLG--D 180 (302)
T ss_dssp EESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHT-TCSEEEEE--E
T ss_pred EecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHc-CCCEEEEe--C
Confidence 333 111 345778999999999875443 4667765555 55 99998885 3
Q ss_pred cccccccccccccccCchhHHHHhhcccccccccCCceEEE----eeCCCCHHHHHHHHHcCCCEE
Q 015424 320 LAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVG----ESGLFTPDDIAYVQEAGVKAV 381 (407)
Q Consensus 320 L~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVA----ESGI~t~eD~~~l~~~GadaV 381 (407)
-. |. ..++...++++.++.. + | ++++.. -+|+ ..+......++|++-|
T Consensus 181 T~--G~--------~~P~~~~~lv~~l~~~-~-~-~~~l~~H~Hn~~Gl-a~An~laAv~aGa~~v 232 (302)
T 2ftp_A 181 TI--GV--------GTAGATRRLIEAVASE-V-P-RERLAGHFHDTYGQ-ALANIYASLLEGIAVF 232 (302)
T ss_dssp SS--SC--------CCHHHHHHHHHHHTTT-S-C-GGGEEEEEBCTTSC-HHHHHHHHHHTTCCEE
T ss_pred CC--CC--------cCHHHHHHHHHHHHHh-C-C-CCeEEEEeCCCccH-HHHHHHHHHHhCCCEE
Confidence 31 11 1233444444443221 2 1 233322 2677 4556777778999865
No 347
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=93.08 E-value=0.15 Score=46.74 Aligned_cols=83 Identities=12% Similarity=0.010 Sum_probs=61.1
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD 276 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~ 276 (407)
++.++.+++ +.||+.|.+- |.--.|+++.|+.++.. . ++|++.=..| ++..+.+...+|||+|.++.++.. .+
T Consensus 113 t~~e~~~A~-~~Gad~v~~f--pa~~~gG~~~lk~l~~~-~~~ipvvaiGGI-~~~n~~~~l~aGa~~vavgSai~~-~d 186 (207)
T 2yw3_A 113 TPTEVERAL-ALGLSALKFF--PAEPFQGVRVLRAYAEV-FPEVRFLPTGGI-KEEHLPHYAALPNLLAVGGSWLLQ-GN 186 (207)
T ss_dssp SHHHHHHHH-HTTCCEEEET--TTTTTTHHHHHHHHHHH-CTTCEEEEBSSC-CGGGHHHHHTCSSBSCEEESGGGS-SC
T ss_pred CHHHHHHHH-HCCCCEEEEe--cCccccCHHHHHHHHhh-CCCCcEEEeCCC-CHHHHHHHHhCCCcEEEEehhhhC-CC
Confidence 566766655 5699999882 21112568999999976 5 8999977765 567899999999999999999887 45
Q ss_pred HHHHHHHHHH
Q 015424 277 IRYMTKICKL 286 (407)
Q Consensus 277 L~~Li~~a~~ 286 (407)
+.++.+.+++
T Consensus 187 ~~~i~~~a~~ 196 (207)
T 2yw3_A 187 LEAVRAKVRA 196 (207)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555554
No 348
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=93.03 E-value=0.42 Score=45.44 Aligned_cols=82 Identities=17% Similarity=0.085 Sum_probs=61.6
Q ss_pred CHHHH---HHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCC-cEEeccccC--CHH----HHHHHHHcCCCEEEE
Q 015424 198 DPVEI---ARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKC-PLLCKEFIV--DAW----QIYYARTKGADAVLL 267 (407)
Q Consensus 198 dp~~i---A~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~l-PVL~KDFIi--d~~----QI~eAr~~GADaVLL 267 (407)
++..+ |+...+.||+-|-+- |.|++++++.+++. +++ ||..-..|. +.. .+.++..+||+++..
T Consensus 157 s~~~i~~a~~~a~~~GAD~vkt~-----~~~~~e~~~~~~~~-~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsv 230 (263)
T 1w8s_A 157 APEIVAYAARIALELGADAMKIK-----YTGDPKTFSWAVKV-AGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAV 230 (263)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE-----CCSSHHHHHHHHHH-TTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEc-----CCCCHHHHHHHHHh-CCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 45555 566788999998875 34799999999986 677 999888887 555 455566999999999
Q ss_pred eccCCCHHHHHHHHHHHH
Q 015424 268 IAAVLPDLDIRYMTKICK 285 (407)
Q Consensus 268 iaaiL~~~~L~~Li~~a~ 285 (407)
+.+++..++-..+++...
T Consensus 231 graI~~~~dp~~~~~~l~ 248 (263)
T 1w8s_A 231 GRNVWQRRDALKFARALA 248 (263)
T ss_dssp SHHHHTSTTHHHHHHHHH
T ss_pred ehhhcCCcCHHHHHHHHH
Confidence 999986655555554443
No 349
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=92.99 E-value=5.1 Score=38.24 Aligned_cols=162 Identities=15% Similarity=0.121 Sum_probs=96.9
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCH-HHHHHHH---hc-CCCCcEEeccccCCHH----HHHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSF-ENLEAVR---SA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~-edL~~Vr---~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-++. -..++.=|. |..+.++ +. .-.+||+..=.-.+.. +...|..+|||+|++..
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 103 (289)
T 2yxg_A 24 EENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSIT 103 (289)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3556667889999999872 112222233 2333222 21 2369999765444443 23446788999999988
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEE-------e-CCHHHHHHHh-cccCCcEEEeeccccccccccccccccccCc
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVE-------V-HDEREMDRVL-GIEGIELIGINNRNLAISIFSYRTETFEVDN 336 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVE-------V-ht~eElerAl-~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl 336 (407)
-.. +++.+.. +-..+...++..++= + -+.+.+.+.. +. ..++|| ++-.-|+
T Consensus 104 P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pnivgi--------------K~s~gd~ 167 (289)
T 2yxg_A 104 PYYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLAEEY--SNISAV--------------KEANPNL 167 (289)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHC--TTEEEE--------------EECCSCT
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHHhC--CCEEEE--------------EeCCCCH
Confidence 754 5555544 445566677776552 1 1455566655 44 479999 4444577
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
....+++.. . +..+ -+|-. +.+-....+|++|++-|.+=+-
T Consensus 168 ~~~~~~~~~-----~---~f~v--~~G~d--~~~~~~l~~G~~G~is~~~n~~ 208 (289)
T 2yxg_A 168 SQVSELIHD-----A---KITV--LSGND--ELTLPIIALGGKGVISVVANIV 208 (289)
T ss_dssp HHHHHHHHH-----T---CSEE--EESCG--GGHHHHHHTTCCEEEESGGGTC
T ss_pred HHHHHHHHh-----C---CeEE--EECcH--HHHHHHHHCCCCEEEeChhhhh
Confidence 777777653 1 3333 34432 2245566799999999877553
No 350
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=92.98 E-value=0.41 Score=47.02 Aligned_cols=93 Identities=11% Similarity=0.115 Sum_probs=74.0
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCC-CHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL-~~~ 275 (407)
+..++++.+++.|...| |+.+-..+++.++.+++. +++||...+-+.++.++.++...| +|.|.+-.... +-.
T Consensus 203 ~a~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 277 (370)
T 1nu5_A 203 TASIWIPRLEEAGVELV----EQPVPRANFGALRRLTEQ-NGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIA 277 (370)
T ss_dssp HHHHHHHHHHHHTCCEE----ECCSCTTCHHHHHHHHHH-CSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHH
T ss_pred HHHHHHHHHHhcCcceE----eCCCCcccHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHH
Confidence 45567888888886653 444556789999999987 899999999999999999987765 89999976655 445
Q ss_pred HHHHHHHHHHHcCCcEEEEe
Q 015424 276 DIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVEV 295 (407)
+...+.+.|+..|+.+++-+
T Consensus 278 ~~~~i~~~A~~~g~~~~~~~ 297 (370)
T 1nu5_A 278 NTLKVAAVAEAAGISSYGGT 297 (370)
T ss_dssp HHHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHHHHcCCcEEecC
Confidence 67788899999999988654
No 351
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=92.96 E-value=2.5 Score=41.00 Aligned_cols=163 Identities=13% Similarity=0.126 Sum_probs=97.4
Q ss_pred HHHHHHHHHcCCcEEEEE-ecCCcCCCCHHHH-HHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFENL-EAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVL-Td~~~F~Gs~edL-~~V---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-++ |-..++.=|.+.- +.+ ++. .-.+||+..=.- +.. +...|..+|||+|++..
T Consensus 36 ~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A~~~Gadavlv~~ 114 (314)
T 3d0c_A 36 DDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY-SVDTAIELGKSAIDSGADCVMIHQ 114 (314)
T ss_dssp HHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHHHHcCCCEEEECC
Confidence 355666788999998876 3223333344332 222 221 236999965443 443 23446789999999988
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEEeC----CHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHH
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVEVH----DEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKK 341 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVEVh----t~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~ 341 (407)
-.. +++.+.. +-..+...++.+++=-. +.+.+.+..+. ..|+|| ++-.-|+....+
T Consensus 115 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~tg~l~~~~~~~La~~--pnIvgi--------------Kdssgd~~~~~~ 178 (314)
T 3d0c_A 115 PVHPYITDAGAVEYYRNIIEALDAPSIIYFKDAHLSDDVIKELAPL--DKLVGI--------------KYAINDIQRVTQ 178 (314)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHSSSCEEEEECCTTSCTHHHHHHTTC--TTEEEE--------------EECCCCHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCHHHHHHHHcC--CCEEEE--------------EeCCCCHHHHHH
Confidence 754 5555444 44556677877655212 34555554443 579999 444557777777
Q ss_pred HhhcccccccccC--CceEEEeeCCCCHH-HHHHHHHcCCCEEEEcccccC
Q 015424 342 LLEGERGEIIRQK--NIIVVGESGLFTPD-DIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 342 L~~~~~~~~i~~~--~v~vVAESGI~t~e-D~~~l~~~GadaVLVGeaLmk 389 (407)
++... ++ ++.+ -+|- -+ .+.....+|++|++-|.+=+-
T Consensus 179 ~~~~~------~~~~~f~v--~~G~--d~~~~~~~l~~G~~G~is~~an~~ 219 (314)
T 3d0c_A 179 VMRAV------PKSSNVAF--ICGT--AEKWAPFFYHAGAVGFTSGLVNVF 219 (314)
T ss_dssp HHHHS------CGGGCCEE--EETT--HHHHHHHHHHHTCCEEEESGGGTC
T ss_pred HHHhc------CCCCCEEE--EEeC--cHHHHHHHHHcCCCEEEecHHHhh
Confidence 76542 22 4333 3453 12 355566789999999876543
No 352
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=92.94 E-value=3 Score=41.15 Aligned_cols=166 Identities=13% Similarity=0.155 Sum_probs=97.0
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCHH-HHHHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSFE-NLEAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~e-dL~~V---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-|+. -..++.=+.+ ..+.+ ++. .-.+||+..=.-.+.. +...|..+|||+|+++.
T Consensus 55 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 134 (343)
T 2v9d_A 55 AALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVIN 134 (343)
T ss_dssp HHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3556667899999999872 2222222332 22222 222 2379999765444443 23446788999999998
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEE-e-------CCHHHHHHHh-cccCCcEEEeeccccccccccccccccccCc
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVE-V-------HDEREMDRVL-GIEGIELIGINNRNLAISIFSYRTETFEVDN 336 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVE-V-------ht~eElerAl-~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl 336 (407)
-.. +++.+.. +...+...++.+++= + =+.+.+.+.. +. ..|+|| ++-.-|+
T Consensus 135 P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~~--pnIvgi--------------Kdssgd~ 198 (343)
T 2v9d_A 135 PYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSR--SNIIGI--------------KDTIDSV 198 (343)
T ss_dssp CSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHHC--TTEEEE--------------EECCSCH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHhC--CCEEEE--------------EeCCCCH
Confidence 754 5555544 445566667776542 1 1455565555 44 479999 4444577
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEccccc
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIV 388 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLm 388 (407)
....+++...+.. .+++.+ -+|-. +.+.....+|++|++-|.+=+
T Consensus 199 ~~~~~l~~~~~~~---~~~f~v--~~G~D--~~~l~~l~~Ga~G~is~~anv 243 (343)
T 2v9d_A 199 AHLRSMIHTVKGA---HPHFTV--LCGYD--DHLFNTLLLGGDGAISASGNF 243 (343)
T ss_dssp HHHHHHHHHHHHH---CTTCEE--EESSG--GGHHHHHHTTCCEECCGGGTT
T ss_pred HHHHHHHHhcCCC---CCCEEE--EECcH--HHHHHHHHCCCCEEEeCHHHh
Confidence 7777776542100 024333 34432 234556678999999887644
No 353
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=92.91 E-value=1.6 Score=41.22 Aligned_cols=106 Identities=19% Similarity=0.269 Sum_probs=70.9
Q ss_pred HHHHHHHHcCCCEEEEeccC---------CCHHHH----HHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeecc
Q 015424 252 WQIYYARTKGADAVLLIAAV---------LPDLDI----RYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNR 318 (407)
Q Consensus 252 ~QI~eAr~~GADaVLLiaai---------L~~~~L----~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnR 318 (407)
.++.++...|++.|.|-..- ++..++ +.+.+.|+.+|...+|. |..++ |+.+ |++-|=+...
T Consensus 47 ~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liIn--d~~~l--A~~~-gAdGVHLg~~ 121 (243)
T 3o63_A 47 QFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVN--DRADI--ARAA-GADVLHLGQR 121 (243)
T ss_dssp HHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEE--SCHHH--HHHH-TCSEEEECTT
T ss_pred HHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEe--CHHHH--HHHh-CCCEEEecCC
Confidence 46778899999999997766 656554 34566677788887774 44444 5555 7776666555
Q ss_pred ccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccc
Q 015424 319 NLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 387 (407)
Q Consensus 319 dL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 387 (407)
|+ ......+++. .+ .+|.-| ++|++++.+..+.|+|-|.+|.-+
T Consensus 122 dl--------------~~~~~r~~~~---------~~-~~iG~S-~ht~~Ea~~A~~~GaDyI~vgpvf 165 (243)
T 3o63_A 122 DL--------------PVNVARQILA---------PD-TLIGRS-THDPDQVAAAAAGDADYFCVGPCW 165 (243)
T ss_dssp SS--------------CHHHHHHHSC---------TT-CEEEEE-ECSHHHHHHHHHSSCSEEEECCSS
T ss_pred cC--------------CHHHHHHhhC---------CC-CEEEEe-CCCHHHHHHHhhCCCCEEEEcCcc
Confidence 55 1222333322 22 223333 599999999999999999999744
No 354
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=92.89 E-value=1.9 Score=41.90 Aligned_cols=166 Identities=17% Similarity=0.156 Sum_probs=95.9
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCHH-HHHHHH---hc-CCCCcEEeccccCCHHH----HHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSFE-NLEAVR---SA-GVKCPLLCKEFIVDAWQ----IYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~e-dL~~Vr---~a-~v~lPVL~KDFIid~~Q----I~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-|+. =..++.=+.+ ..+.++ +. .-.+||+..=.- +..+ ...|..+|||+|+++.
T Consensus 36 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~~ 114 (316)
T 3e96_A 36 KETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGY-ATSTAIELGNAAKAAGADAVMIHM 114 (316)
T ss_dssp HHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3455667889999998862 1122222333 223232 22 236899976432 4432 3446788999999986
Q ss_pred cCC---CHHHHHH-HHHHHHHcCCcEEEEe----CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHH
Q 015424 270 AVL---PDLDIRY-MTKICKLLGLTALVEV----HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKK 341 (407)
Q Consensus 270 aiL---~~~~L~~-Li~~a~~LGL~aLVEV----ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~ 341 (407)
-.. +++.+.. +-..+...++.+++=- =+.+.+.+..+. ..|+|| ++-.-|+....+
T Consensus 115 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La~~--pnIvgi--------------Kdssgd~~~~~~ 178 (316)
T 3e96_A 115 PIHPYVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLAPL--QNLVGV--------------KYAINDLPRFAK 178 (316)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHTTC--TTEEEE--------------EECCCCHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHcC--CCEEEE--------------EeCCCCHHHHHH
Confidence 654 5555544 4455666677775532 144555555554 579999 444567777777
Q ss_pred HhhcccccccccCCce-EEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 342 LLEGERGEIIRQKNII-VVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 342 L~~~~~~~~i~~~~v~-vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
++...+ +.+.. ++ +|-.+. -+..+..+|++|++-|.+=+-+
T Consensus 179 ~~~~~~-----~~~f~~v~--~G~d~~-~~~~~l~~G~~G~is~~an~~P 220 (316)
T 3e96_A 179 VVRSIP-----EEHQIAWI--CGTAEK-WAPFFWHAGAKGFTSGLVNLLP 220 (316)
T ss_dssp HHTTSC-----GGGCCEEE--ETTCTT-THHHHHHHTCCEEEESGGGTCH
T ss_pred HHHhcC-----CCCceEEE--eCChHH-HHHHHHHCCCCEEEechhhhhH
Confidence 776421 11333 32 444221 1334567899999999875543
No 355
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=92.89 E-value=4.6 Score=37.44 Aligned_cols=140 Identities=9% Similarity=0.058 Sum_probs=89.5
Q ss_pred cHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcE-EEEEecCCcCCCCHHHHHHHHhcCCCC
Q 015424 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAAC-LSILTDEKYFKGSFENLEAVRSAGVKC 240 (407)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~a-ISVLTd~~~F~Gs~edL~~Vr~a~v~l 240 (407)
.|.+.|.... .++..+..|+|..+. +. ........+++...+.|... +-+- . -+.+.|..+|+...++
T Consensus 87 tL~evl~~~~--~~~~~l~iEiK~~~~--~~-~~~~~~~~v~~~l~~~~~~~~v~~~----S--F~~~~l~~~~~~~p~~ 155 (250)
T 3ks6_A 87 TLEELCALYV--DSHVNFRCEIKPGVD--GL-PYEGFVALVIAGLERHSMLERTTFS----S--FLLASMDELWKATTRP 155 (250)
T ss_dssp EHHHHHHHHT--TCSCEEEEEECCCTT--SC-CCTTHHHHHHHHHHHTTCGGGEEEE----E--SCHHHHHHHHHHCCSC
T ss_pred CHHHHHHHHh--ccCcEEEEEeCCCcc--cC-cchHHHHHHHHHHHhcCCCCCEEEE----e--CCHHHHHHHHHHCCCC
Confidence 4555555432 145789999997531 11 11123455677777776421 2221 1 2678899998754566
Q ss_pred cEEeccccCC-------HHHH-HHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEE-EeCCHHHHHHHhcccCCc
Q 015424 241 PLLCKEFIVD-------AWQI-YYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGIE 311 (407)
Q Consensus 241 PVL~KDFIid-------~~QI-~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLV-EVht~eElerAl~l~Ga~ 311 (407)
|+- ++.+ ..++ ..+...|++.+......++. ++++.+|+.|+.+.+ -|.+.+++++.+++ |++
T Consensus 156 ~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~G~~V~~WTvn~~~~~~~l~~~-GVD 227 (250)
T 3ks6_A 156 RLW---LVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTADA----GLMAQVQAAGLDFGCWAAHTPSQITKALDL-GVK 227 (250)
T ss_dssp EEE---EECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCCH----HHHHHHHHTTCEEEEECCCSHHHHHHHHHH-TCS
T ss_pred cEE---EEecccccccchhHHHHHHHhcCCCEEecchhhCCH----HHHHHHHHCCCEEEEEeCCCHHHHHHHHHc-CCC
Confidence 652 2221 0122 33578899999998887775 377889999999744 57789999999998 999
Q ss_pred EEEeecccc
Q 015424 312 LIGINNRNL 320 (407)
Q Consensus 312 iIGINnRdL 320 (407)
.|-.|..++
T Consensus 228 gIiTD~P~~ 236 (250)
T 3ks6_A 228 VFTTDRPTL 236 (250)
T ss_dssp EEEESCHHH
T ss_pred EEEcCCHHH
Confidence 888765443
No 356
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=92.82 E-value=0.066 Score=51.52 Aligned_cols=123 Identities=14% Similarity=0.110 Sum_probs=72.1
Q ss_pred HHHHHHHHcCCCEEEEeccCC---C------HHHHHHHHHHHHHcCC--cEEEEeCCH--HH-H----HHHhcccCCcEE
Q 015424 252 WQIYYARTKGADAVLLIAAVL---P------DLDIRYMTKICKLLGL--TALVEVHDE--RE-M----DRVLGIEGIELI 313 (407)
Q Consensus 252 ~QI~eAr~~GADaVLLiaaiL---~------~~~L~~Li~~a~~LGL--~aLVEVht~--eE-l----erAl~l~Ga~iI 313 (407)
.++.+|...|||.|-+..-+- + -+++..+.+.|+..|+ .+++|..-+ +| + +.+.++ ||++|
T Consensus 89 ~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~ea-GADfV 167 (260)
T 1p1x_A 89 AETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKA-GADFI 167 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHT-TCSEE
T ss_pred HHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHh-CCCEE
Confidence 467788999999996654322 1 1356666666665454 457887622 33 2 234454 99887
Q ss_pred EeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCC----------EEEE
Q 015424 314 GINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVK----------AVLV 383 (407)
Q Consensus 314 GINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gad----------aVLV 383 (407)
=.. +||++. ..+++...-+.+.++.-. ....+.+-+.|||+|.+|+..+.++|++ ++-+
T Consensus 168 KTS--------TGf~~~--gAt~e~v~lm~~~I~~~~-~g~~v~VKaaGGIrt~~~al~~i~aga~~lG~~w~~~~~~Ri 236 (260)
T 1p1x_A 168 KTS--------TGKVAV--NATPESARIMMEVIRDMG-VEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRF 236 (260)
T ss_dssp ECC--------CSCSSC--CCCHHHHHHHHHHHHHHT-CTTTCEEECBSSCCSHHHHHHHHHHHHHHHCTTSCSTTTBCE
T ss_pred EeC--------CCCCCC--CCCHHHHHHHHHHHHHhc-CCCCceEEEeCCCCCHHHHHHHHHhhhhhccccccccCceEe
Confidence 663 222211 112332222222111000 1246789999999999999999999875 5667
Q ss_pred ccc
Q 015424 384 GES 386 (407)
Q Consensus 384 Gea 386 (407)
|.+
T Consensus 237 GtS 239 (260)
T 1p1x_A 237 GAS 239 (260)
T ss_dssp EES
T ss_pred ecc
Confidence 765
No 357
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=92.80 E-value=0.71 Score=45.26 Aligned_cols=121 Identities=13% Similarity=0.075 Sum_probs=87.4
Q ss_pred cHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCc
Q 015424 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP 241 (407)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lP 241 (407)
....++++.. .....+....- |-+.. .+ .++++.+++.|...| |+.+-..+++.++.+++. +++|
T Consensus 171 e~v~avr~~~--g~~~~l~vDan------~~~~~-~~-~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~ip 235 (368)
T 1sjd_A 171 EPVRAVRERF--GDDVLLQVDAN------TAYTL-GD-APQLARLDPFGLLLI----EQPLEEEDVLGHAELARR-IQTP 235 (368)
T ss_dssp HHHHHHHHHH--CTTSEEEEECT------TCCCG-GG-HHHHHTTGGGCCSEE----ECCSCTTCHHHHHHHHTT-CSSC
T ss_pred HHHHHHHHhc--CCCceEEEecc------CCCCH-HH-HHHHHHHHhcCCCeE----eCCCChhhHHHHHHHHHh-CCCC
Confidence 3455666543 12355666542 22332 34 778888888886643 444556789999999986 8999
Q ss_pred EEeccccCCHHHHHHHHHcC-CCEEEEeccCC-CHHHHHHHHHHHHHcCCcEEEEeCC
Q 015424 242 LLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEVHD 297 (407)
Q Consensus 242 VL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL-~~~~L~~Li~~a~~LGL~aLVEVht 297 (407)
|...+-+.++.++.++...| +|.|.+-.... +-.+...+.+.|+..|+.+++-...
T Consensus 236 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 293 (368)
T 1sjd_A 236 ICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWCGGMI 293 (368)
T ss_dssp EEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred EEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEeCCcc
Confidence 99999999999999887665 79999987776 3456778899999999998776443
No 358
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=92.80 E-value=0.1 Score=52.24 Aligned_cols=74 Identities=23% Similarity=0.220 Sum_probs=59.4
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCCCHHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPDLD 276 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~~~ 276 (407)
+..++|+.+++.|++.|+|-.-. .|. +.+..||+. +++||+.-..| ++.+..++...| ||.|.+.-.+|.+.+
T Consensus 243 ~~~~la~~l~~~Gvd~i~v~~~~---~~~-~~~~~ik~~-~~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~lanPd 316 (362)
T 4ab4_A 243 TFTYVARELGKRGIAFICSRERE---ADD-SIGPLIKEA-FGGPYIVNERF-DKASANAALASGKADAVAFGVPFIANPD 316 (362)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC---CTT-CCHHHHHHH-HCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred HHHHHHHHHHHhCCCEEEECCCC---CCH-HHHHHHHHH-CCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcH
Confidence 45778999999999999986422 222 567889987 89999977666 999999999888 999999887776656
Q ss_pred H
Q 015424 277 I 277 (407)
Q Consensus 277 L 277 (407)
|
T Consensus 317 l 317 (362)
T 4ab4_A 317 L 317 (362)
T ss_dssp H
T ss_pred H
Confidence 5
No 359
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=92.79 E-value=3.7 Score=39.83 Aligned_cols=162 Identities=14% Similarity=0.111 Sum_probs=97.7
Q ss_pred CHHHHHHHHHHcCCcEEEEEe-cCCcCCCCHHHH-HHH---Hhc-CCCCcEEeccccCCHHH----HHHHHHcCC-CEEE
Q 015424 198 DPVEIARSYEKGGAACLSILT-DEKYFKGSFENL-EAV---RSA-GVKCPLLCKEFIVDAWQ----IYYARTKGA-DAVL 266 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLT-d~~~F~Gs~edL-~~V---r~a-~v~lPVL~KDFIid~~Q----I~eAr~~GA-DaVL 266 (407)
...++++.+.+.|+++|-|+. -..++.=+.+.- +.+ .+. .-.+||+..=.-.+..+ ...|..+|| |+|+
T Consensus 29 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davl 108 (311)
T 3h5d_A 29 AIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGL 108 (311)
T ss_dssp HHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEE
Confidence 445667778899999999872 222222233322 222 232 23689997644344442 344677897 9999
Q ss_pred EeccCC---CHHHHHH-HHHHHHHcCCcEEEEe--------CCHHHHHHHhcccCCcEEEeecccccccccccccccccc
Q 015424 267 LIAAVL---PDLDIRY-MTKICKLLGLTALVEV--------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEV 334 (407)
Q Consensus 267 LiaaiL---~~~~L~~-Li~~a~~LGL~aLVEV--------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~v 334 (407)
++.-.. +++.+.. +-..+...++.+++=- =+.+.+.+..+. ..++|| ++-.
T Consensus 109 v~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnIvgi--------------Kdss- 171 (311)
T 3h5d_A 109 AIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLADH--PNIIGV--------------KECT- 171 (311)
T ss_dssp EECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTS--TTEEEE--------------EECS-
T ss_pred EcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcC--CCEEEE--------------EeCC-
Confidence 997643 5555444 4444555677765421 145666666664 579999 5555
Q ss_pred CchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEccc
Q 015424 335 DNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 386 (407)
Q Consensus 335 Dl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 386 (407)
|+....+++... ++++.+. +|-. +.+.....+|++|++-|.+
T Consensus 172 d~~~~~~~~~~~------~~~f~v~--~G~d--~~~l~~l~~Ga~G~is~~a 213 (311)
T 3h5d_A 172 SLANMAYLIEHK------PEEFLIY--TGED--GDAFHAMNLGADGVISVAS 213 (311)
T ss_dssp CHHHHHHHHHHC------CSSCEEE--ECCG--GGHHHHHHHTCCEEEESTH
T ss_pred CHHHHHHHHHHc------CCCEEEE--ECcH--HHHHHHHHcCCCEEEechh
Confidence 888888877642 2344443 3432 2244556789999998876
No 360
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=92.78 E-value=1.5 Score=40.72 Aligned_cols=125 Identities=13% Similarity=0.105 Sum_probs=76.9
Q ss_pred HHHHHHHhcCCCCcEEeccccCCHHHHH-HHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcC-CcEEEE-eCCHHHHHHH
Q 015424 228 ENLEAVRSAGVKCPLLCKEFIVDAWQIY-YARTKGADAVLLIAAVLPDLDIRYMTKICKLLG-LTALVE-VHDEREMDRV 304 (407)
Q Consensus 228 edL~~Vr~a~v~lPVL~KDFIid~~QI~-eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LG-L~aLVE-Vht~eElerA 304 (407)
+.+..+++. -=+||++.+-.-+..++. .+...|++.|=+...-.. .++.+-+.++++. +..-.- +.+.++++.|
T Consensus 9 ~~~~~l~~~-~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~~~--~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A 85 (224)
T 1vhc_A 9 QIIEKLREL-KIVPVIALDNADDILPLADTLAKNGLSVAEITFRSEA--AADAIRLLRANRPDFLIAAGTVLTAEQVVLA 85 (224)
T ss_dssp HHHHHHHHH-CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTT--HHHHHHHHHHHCTTCEEEEESCCSHHHHHHH
T ss_pred HHHHHHHHC-CeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccCch--HHHHHHHHHHhCcCcEEeeCcEeeHHHHHHH
Confidence 345556654 347999876545555554 467889999888754333 2333434666763 322211 3478999999
Q ss_pred hcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEE
Q 015424 305 LGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLV 383 (407)
Q Consensus 305 l~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLV 383 (407)
+++ ||+.|=.-+ .|.+..... .. .+..++- |+.|++++.++.++|+|.|-+
T Consensus 86 ~~a-GAd~v~~p~----------------~d~~v~~~a-r~--------~g~~~i~--Gv~t~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 86 KSS-GADFVVTPG----------------LNPKIVKLC-QD--------LNFPITP--GVNNPMAIEIALEMGISAVKF 136 (224)
T ss_dssp HHH-TCSEEECSS----------------CCHHHHHHH-HH--------TTCCEEC--EECSHHHHHHHHHTTCCEEEE
T ss_pred HHC-CCCEEEECC----------------CCHHHHHHH-HH--------hCCCEEe--ccCCHHHHHHHHHCCCCEEEE
Confidence 997 999883321 233222222 21 1222222 599999999999999999877
No 361
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=92.78 E-value=0.38 Score=48.20 Aligned_cols=120 Identities=10% Similarity=0.018 Sum_probs=87.4
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....|..+.- .|+ . ..+..++++.+++.|...| |+.+-.++++.+..+|+. +++||
T Consensus 180 ~v~avR~a~--g~~~~l~vDaN-----~~~-~-~~~A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 245 (393)
T 4dwd_A 180 KARAVRELL--GPDAVIGFDAN-----NGY-S-VGGAIRVGRALEDLGYSWF----EEPVQHYHVGAMGEVAQR-LDITV 245 (393)
T ss_dssp HHHHHHHHH--CTTCCEEEECT-----TCC-C-HHHHHHHHHHHHHTTCSEE----ECCSCTTCHHHHHHHHHH-CSSEE
T ss_pred HHHHHHHHh--CCCCeEEEECC-----CCC-C-HHHHHHHHHHHHhhCCCEE----ECCCCcccHHHHHHHHhh-CCCCE
Confidence 345555542 12355776642 121 1 2245567888899886655 445666789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcCCCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEEeCCH
Q 015424 243 LCKEFIVDAWQIYYARTKGADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHDE 298 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVEVht~ 298 (407)
...+-+.+++++.++...|+|.|.+....... .+...+...|+..|+.++ +|+.
T Consensus 246 a~dE~~~~~~~~~~~i~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~--~h~~ 300 (393)
T 4dwd_A 246 SAGEQTYTLQALKDLILSGVRMVQPDIVKMGGITGMMQCAALAHAHGVEFV--PHQT 300 (393)
T ss_dssp EBCTTCCSHHHHHHHHHHTCCEECCCTTTTTHHHHHHHHHHHHHHHTCEEC--CCCC
T ss_pred EecCCcCCHHHHHHHHHcCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEe--ecCC
Confidence 99999999999999887789999998887754 567788899999999876 4544
No 362
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=92.76 E-value=3.7 Score=38.09 Aligned_cols=138 Identities=10% Similarity=0.013 Sum_probs=86.0
Q ss_pred cHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCH-HHHHHHHHHcCCc--EEEEEecCCcCCCCHHHHHHHHhcCC
Q 015424 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP-VEIARSYEKGGAA--CLSILTDEKYFKGSFENLEAVRSAGV 238 (407)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp-~~iA~ay~~~GA~--aISVLTd~~~F~Gs~edL~~Vr~a~v 238 (407)
.|.+.|..... ....+..|+|.. | +. .... ..+++...+.+.. .+-+- .-+.+.|..+|+...
T Consensus 99 tL~evl~~~~~--~~~~l~iEiK~~-~--~~---~~~~~~~v~~~l~~~~~~~~~vii~------SF~~~~l~~~~~~~p 164 (252)
T 3qvq_A 99 TLLEAIEVISQ--YGMGLNLELKPC-E--GL---EEETIAASVEVLKQHWPQDLPLLFS------SFNYFALVSAKALWP 164 (252)
T ss_dssp BHHHHHHHHHH--TTCEEEEEECCC-T--TC---HHHHHHHHHHHHHHHSCTTSCEEEE------ESCHHHHHHHHHHCT
T ss_pred CHHHHHHHHhc--cCcEEEEEecCC-C--Cc---cHHHHHHHHHHHHHhCcccCCEEEE------eCCHHHHHHHHHHCC
Confidence 45555554321 347899999932 1 11 0011 2334445555532 12221 136888999986545
Q ss_pred CCcEE--eccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEE-EeCCHHHHHHHhcccCCcEEEe
Q 015424 239 KCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGIELIGI 315 (407)
Q Consensus 239 ~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLV-EVht~eElerAl~l~Ga~iIGI 315 (407)
++|+- ..+.-.+. ...+...|++++.+....++. ++++.+++.|+.+.+ -|.+.+++.+.+++ |++-|-.
T Consensus 165 ~~~~~~l~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~----~~v~~~~~~G~~v~~WTvn~~~~~~~l~~~-GVdgIiT 237 (252)
T 3qvq_A 165 EIARGYNVSAIPSAW--QERLEHLDCAGLHIHQSFFDV----QQVSDIKAAGYKVLAFTINDESLALKLYNQ-GLDAVFS 237 (252)
T ss_dssp TSCEEEECSSCCTTH--HHHHHHHTCSEEEEEGGGCCH----HHHHHHHHTTCEEEEECCCCHHHHHHHHHT-TCCEEEE
T ss_pred CCcEEEEEecCchhH--HHHHHHcCCeEEecchhhCCH----HHHHHHHHCCCEEEEEcCCCHHHHHHHHHc-CCCEEEe
Confidence 66653 33322222 234667899999998888875 377889999998844 56889999999998 9998888
Q ss_pred ecccc
Q 015424 316 NNRNL 320 (407)
Q Consensus 316 NnRdL 320 (407)
|..++
T Consensus 238 D~P~~ 242 (252)
T 3qvq_A 238 DYPQK 242 (252)
T ss_dssp SSHHH
T ss_pred CCHHH
Confidence 65544
No 363
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=92.73 E-value=0.31 Score=46.97 Aligned_cols=44 Identities=25% Similarity=0.120 Sum_probs=38.1
Q ss_pred HHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCC
Q 015424 228 ENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 228 edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (407)
+.++.+|+. +++||++.-.|-++.|+.++...|||+|+.+.++.
T Consensus 198 ~~v~~vr~~-~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv 241 (271)
T 3nav_A 198 ALLERLQQF-DAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVV 241 (271)
T ss_dssp HHHHHHHHT-TCCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 568888886 79999997667789999989999999999988765
No 364
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=92.69 E-value=3.5 Score=40.56 Aligned_cols=140 Identities=17% Similarity=0.217 Sum_probs=103.3
Q ss_pred CCCcEE-eccccCCHHHHHHHHHc--------CCCEEEEeccCCCHH----HHHHHHHHHHHcCCcEEEE----------
Q 015424 238 VKCPLL-CKEFIVDAWQIYYARTK--------GADAVLLIAAVLPDL----DIRYMTKICKLLGLTALVE---------- 294 (407)
Q Consensus 238 v~lPVL-~KDFIid~~QI~eAr~~--------GADaVLLiaaiL~~~----~L~~Li~~a~~LGL~aLVE---------- 294 (407)
.++||. .-|-.-+...+.+|..+ |-+.|.++.+-++-+ ..++++++|+..|+.+=.|
T Consensus 81 ~~VPVaLHlDHg~~~e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edg 160 (306)
T 3pm6_A 81 ASVPITLHLDHAQDPEIIKRAADLSRSETHEPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDG 160 (306)
T ss_dssp CSSCEEEEEEEECCHHHHHHHHHTC------CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTT
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhhhhccCCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCC
Confidence 578874 56666777889999999 999999999999753 3567888898887665222
Q ss_pred ----------eCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEe--e
Q 015424 295 ----------VHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGE--S 362 (407)
Q Consensus 295 ----------Vht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAE--S 362 (407)
..|++|+.+..+. |++.+.+.--+. || .|.+.+...|++...++.+.+ ..++++|.= |
T Consensus 161 v~~~~~~~~~yT~Peea~~Fv~T-gvD~LAvaiGt~--HG-~Yk~~~p~Ld~~~L~~I~~~v------~~~vpLVlHGgS 230 (306)
T 3pm6_A 161 VQDTVDLEGVLTTPEESEEFVAT-GINWLAPAFGNV--HG-NYGPRGVQLDYERLQRINEAV------GERVGLVLHGAD 230 (306)
T ss_dssp BCCCTTCCCBCCCHHHHHHHHTT-TCSEECCCSSCC--SS-CCCTTCCCCCHHHHHHHHHHH------TTTSEEEECSCT
T ss_pred ccccccccccCCCHHHHHHHHHc-CCCEEEEEcCcc--cc-CcCCCCCccCHHHHHHHHHHh------CCCCCEEeeCCC
Confidence 2478999888775 999988864333 22 244345778998888887652 124666655 5
Q ss_pred CCCCHHHHHHHHHcCCCEEEEccccc
Q 015424 363 GLFTPDDIAYVQEAGVKAVLVGESIV 388 (407)
Q Consensus 363 GI~t~eD~~~l~~~GadaVLVGeaLm 388 (407)
|+ ..++++++.++|+.-|=|++.+.
T Consensus 231 G~-p~e~i~~ai~~GV~KiNi~Tdl~ 255 (306)
T 3pm6_A 231 PF-TKEIFEKCIERGVAKVNVNRAVN 255 (306)
T ss_dssp TC-CHHHHHHHHHTTEEEEEESHHHH
T ss_pred CC-CHHHHHHHHHcCCeEEEeChHHH
Confidence 65 67789999999999999998764
No 365
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=92.66 E-value=0.41 Score=46.26 Aligned_cols=161 Identities=12% Similarity=0.088 Sum_probs=94.0
Q ss_pred HHHHHHHHhc--CC--CCcEEeccc----------cCCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHH
Q 015424 227 FENLEAVRSA--GV--KCPLLCKEF----------IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKL 286 (407)
Q Consensus 227 ~edL~~Vr~a--~v--~lPVL~KDF----------Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~ 286 (407)
+-+|..+++. +. .+.|=..|. =+.+.++ +++||+.|+|+.+ .+ +++.+..=++.|.+
T Consensus 47 ~~~L~~v~~~~~~~~~~i~vgAQn~~~~~~GAfTGEIS~~mL---kd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~ 123 (267)
T 3ta6_A 47 FTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFL---AKLGCSYVVVGHSERRTYHNEDDALVAAKAATALK 123 (267)
T ss_dssp GGGHHHHHHHHHHTTCSCEEEESCCCSSSSBSCTTCCCHHHH---HHTTCCEEEESCHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCceEEEecccCCCCCCCccCcccHHHH---HHcCCCEEEEcchhhccccCCCHHHHHHHHHHHHH
Confidence 5577776643 11 266665551 1555554 5679999999998 23 45555555778889
Q ss_pred cCCcEEEEeCCH-HH-------------HHHHhcccC-----CcEEEeeccccccccccccccccccCchhHHHHhhccc
Q 015424 287 LGLTALVEVHDE-RE-------------MDRVLGIEG-----IELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGER 347 (407)
Q Consensus 287 LGL~aLVEVht~-eE-------------lerAl~l~G-----a~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~ 347 (407)
.||.++++|-.. +| ++.++..-+ --+|....-=.||||..-| .+...+....+|
T Consensus 124 ~GL~pIlCvGEtleeReag~t~~vv~~Ql~~~l~~l~~~~~~~vvIAYEPVWAIGTG~tAt-------pe~aqevh~~IR 196 (267)
T 3ta6_A 124 HGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVAS-------AADAQEVCAAIR 196 (267)
T ss_dssp TTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCHHHHTTCEEEECCGGGSSSSCCCC-------HHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCHHHHhCCCHHHHHHHHHHHHHhcCCHHHhCCEEEEECChhhhcCCcCCC-------HHHHHHHHHHHH
Confidence 999999999844 33 223332101 1377777665555544322 222222211111
Q ss_pred c---ccc---ccCCceEEEeeCCCCHHHHHHHH-HcCCCEEEEcccccCCCChHHHHH
Q 015424 348 G---EII---RQKNIIVVGESGLFTPDDIAYVQ-EAGVKAVLVGESIVKQDDPGKGIT 398 (407)
Q Consensus 348 ~---~~i---~~~~v~vVAESGI~t~eD~~~l~-~~GadaVLVGeaLmk~~dp~~~i~ 398 (407)
. ..+ ....+.++-.|.+ +++.+..++ .-.+||+|||.+=.++++-.+-++
T Consensus 197 ~~l~~~~~~~~a~~~rIlYGGSV-~~~N~~el~~~~diDG~LVGgASL~~~~F~~Ii~ 253 (267)
T 3ta6_A 197 KELASLASPRIADTVRVLYGGSV-NAKNVGDIVAQDDVDGGLVGGASLDGEHFATLAA 253 (267)
T ss_dssp HHHHHHSCHHHHTTSCEEECSCC-CTTTHHHHHTSTTCCEEEECGGGGSHHHHHHHHH
T ss_pred HHHHHhhChhhhccceEEEcCCc-CHhHHHHHhcCCCCCEEEechHhcCHHHHHHHHH
Confidence 1 001 0134566666666 888888776 458999999999888655444443
No 366
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=92.65 E-value=0.19 Score=48.52 Aligned_cols=89 Identities=16% Similarity=0.117 Sum_probs=67.8
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEE-ecCCcCCCCHHHHHHHHhcCC--CCcEEeccccCCHH
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSIL-TDEKYFKGSFENLEAVRSAGV--KCPLLCKEFIVDAW 252 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVL-Td~~~F~Gs~edL~~Vr~a~v--~lPVL~KDFIid~~ 252 (407)
+..+++|+ .+..++.+ +.+.|++.|.|. .+-.-|.=+++....+.+. + ++|+++-..|-++.
T Consensus 169 Gl~~lvev-------------h~~eEl~~-A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~-ip~~~~vIaesGI~t~e 233 (272)
T 3tsm_A 169 GMDALIEV-------------HDEAEMER-ALKLSSRLLGVNNRNLRSFEVNLAVSERLAKM-APSDRLLVGESGIFTHE 233 (272)
T ss_dssp TCEEEEEE-------------CSHHHHHH-HTTSCCSEEEEECBCTTTCCBCTHHHHHHHHH-SCTTSEEEEESSCCSHH
T ss_pred CCeEEEEe-------------CCHHHHHH-HHhcCCCEEEECCCCCccCCCChHHHHHHHHh-CCCCCcEEEECCCCCHH
Confidence 36788898 26667644 446799999998 3434455567777777654 4 68999999999999
Q ss_pred HHHHHHHcCCCEEEEeccCCCHHHHHH
Q 015424 253 QIYYARTKGADAVLLIAAVLPDLDIRY 279 (407)
Q Consensus 253 QI~eAr~~GADaVLLiaaiL~~~~L~~ 279 (407)
++..++.+|||+||++.++...++...
T Consensus 234 dv~~l~~~Ga~gvLVG~almr~~d~~~ 260 (272)
T 3tsm_A 234 DCLRLEKSGIGTFLIGESLMRQHDVAA 260 (272)
T ss_dssp HHHHHHTTTCCEEEECHHHHTSSCHHH
T ss_pred HHHHHHHcCCCEEEEcHHHcCCcCHHH
Confidence 999999999999999999885544433
No 367
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=92.64 E-value=0.13 Score=48.94 Aligned_cols=88 Identities=7% Similarity=-0.024 Sum_probs=65.3
Q ss_pred CCCHH-HHHHHHHHcCCcEEEEEecC---CcCCC-CHHHHHHHHhcCC----CCcEEeccccCCHHHHHHHHHc--CCCE
Q 015424 196 DFDPV-EIARSYEKGGAACLSILTDE---KYFKG-SFENLEAVRSAGV----KCPLLCKEFIVDAWQIYYARTK--GADA 264 (407)
Q Consensus 196 ~~dp~-~iA~ay~~~GA~aISVLTd~---~~F~G-s~edL~~Vr~a~v----~lPVL~KDFIid~~QI~eAr~~--GADa 264 (407)
..++. ++|+.|++. |..|-+. +- +.+.| +++.++.+++. + ++||+.-..|.++.++.+.... |||+
T Consensus 156 ~~~~~~e~a~~~~~~-a~~il~t-~i~~dG~~~G~d~eli~~l~~~-~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~g 232 (260)
T 2agk_A 156 DLELNADTFRELRKY-TNEFLIH-AADVEGLCGGIDELLVSKLFEW-TKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVD 232 (260)
T ss_dssp EEEESHHHHHHHTTT-CSEEEEE-C-------CCCCHHHHHHHHHH-HTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEE
T ss_pred CccHHHHHHHHHHHh-cCEEEEE-eeccccCcCCCCHHHHHHHHHh-hcccCCceEEEeCCCCCHHHHHHHHHhcCCCCE
Confidence 35778 999999999 9988874 32 23334 67778888886 7 9999999999999999999887 9999
Q ss_pred EEEeccC--C-CH-HHHHHHHHHHHH
Q 015424 265 VLLIAAV--L-PD-LDIRYMTKICKL 286 (407)
Q Consensus 265 VLLiaai--L-~~-~~L~~Li~~a~~ 286 (407)
|++..++ . .+ -.+.++.++.++
T Consensus 233 vivg~al~l~~g~~~~~~~~~~~~~~ 258 (260)
T 2agk_A 233 LTFGSSLDIFGGNLVKFEDCCRWNEK 258 (260)
T ss_dssp EECCTTBGGGTCSSBCHHHHHHHHHH
T ss_pred EEeeCCHHHcCCCCCCHHHHHHHHHh
Confidence 9998885 3 23 345555554443
No 368
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=92.64 E-value=2 Score=40.36 Aligned_cols=177 Identities=14% Similarity=0.108 Sum_probs=99.3
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhc--CCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a--~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~ 275 (407)
+|. .+......||+++-+-.|. ...+.+.......+ ....|++.+=.-.++..|..+..+|+|+|++ -.+-+.+
T Consensus 29 ~p~-~~e~a~~~gaD~v~lDlEd--~p~~~~~a~~~~~~~~~~~~~~~VRv~~~~~~~i~~~l~~g~~gI~~-P~V~s~~ 104 (256)
T 1dxe_A 29 NPI-STEVLGLAGFDWLVLDGEH--APNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLI-PFVETKE 104 (256)
T ss_dssp SHH-HHHHHTTSCCSEEEEESSS--SSCCHHHHHHHHHHTTTCSSEEEEECSSSCHHHHHHHHHTTCCEEEE-SCCCSHH
T ss_pred CHH-HHHHHHhCCCCEEEEcCCC--CCCCHHHHHHHHHHHHhCCCcEEEECCCCCHHHHHHHHhcCCceeee-cCcCCHH
Confidence 444 4455567799977664433 25555555544322 1245555433336777898899999999766 6677788
Q ss_pred HHHHHHHHHHH----------------------------cCCcEEEEeCCHHHHH---HHhcccCCcEEEeecccccccc
Q 015424 276 DIRYMTKICKL----------------------------LGLTALVEVHDEREMD---RVLGIEGIELIGINNRNLAISI 324 (407)
Q Consensus 276 ~L~~Li~~a~~----------------------------LGL~aLVEVht~eEle---rAl~l~Ga~iIGINnRdL~~~~ 324 (407)
+++.+.+.++. -.+.+++=+-|.+-++ ..+..++.+.+-|..-||....
T Consensus 105 ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~~l 184 (256)
T 1dxe_A 105 EAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDLAAAL 184 (256)
T ss_dssp HHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHTHHHHHTSTTCCEEEECHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHhHHHHhCCCCCCEEEEChHHHHHHh
Confidence 88888776641 0233444444444333 3333346788877777884433
Q ss_pred ccccccccccCchhH-HHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEccc
Q 015424 325 FSYRTETFEVDNSNT-KKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 386 (407)
Q Consensus 325 ~~~t~~Tf~vDl~~t-~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 386 (407)
. ++.....+.+... .+++...+. .++.+..-. .+++++..+.+.|++.+.+|..
T Consensus 185 g-~~~~~~~p~v~~a~~~iv~aa~a-----~G~~~~v~~--~d~~~~~~~~~~G~~~~s~~~d 239 (256)
T 1dxe_A 185 G-HLGNASHPDVQKAIQHIFNRASA-----HGKPSGILA--PVEADARRYLEWGATFVAVGSD 239 (256)
T ss_dssp T-CTTCTTSHHHHHHHHHHHHHHHH-----TTCCEEEEC--CSHHHHHHHHHTTCCEEEEEEH
T ss_pred C-CCCCCCCHHHHHHHHHHHHHHHH-----hCCceEEec--CCHHHHHHHHHcCCCEEEechH
Confidence 2 2211111112111 222222111 233332222 3899999999999999999964
No 369
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=92.57 E-value=0.43 Score=47.61 Aligned_cols=118 Identities=9% Similarity=0.036 Sum_probs=85.9
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHH-hcCCCCc
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVR-SAGVKCP 241 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr-~a~v~lP 241 (407)
...++++.. .....|..+.- .|+ . ..+..++++.+++.|...| |+.+-..+++.+..+| +. +++|
T Consensus 184 ~v~avR~a~--g~d~~l~vDan-----~~~-~-~~~A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~~-~~iP 249 (389)
T 3ozy_A 184 NLRAMRQRV--GADVEILVDAN-----QSL-G-RHDALAMLRILDEAGCYWF----EEPLSIDDIEGHRILRAQG-TPVR 249 (389)
T ss_dssp HHHHHHHHH--CTTSEEEEECT-----TCC-C-HHHHHHHHHHHHHTTCSEE----ESCSCTTCHHHHHHHHTTC-CSSE
T ss_pred HHHHHHHHc--CCCceEEEECC-----CCc-C-HHHHHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHhcC-CCCC
Confidence 345555543 12356776642 122 1 1245567888999987766 4556667899999999 86 8999
Q ss_pred EEeccccCCHHHHHHHHHc-CCCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEE
Q 015424 242 LLCKEFIVDAWQIYYARTK-GADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVE 294 (407)
Q Consensus 242 VL~KDFIid~~QI~eAr~~-GADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVE 294 (407)
|...+-+.+++++.+.... ++|.|.+...... -.+...+...|+.+|+.+++-
T Consensus 250 Ia~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h 304 (389)
T 3ozy_A 250 IATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWNPH 304 (389)
T ss_dssp EEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECCC
T ss_pred EEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 9999999999998887765 5899999888774 467788999999999997744
No 370
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=92.55 E-value=0.4 Score=47.70 Aligned_cols=96 Identities=16% Similarity=0.079 Sum_probs=75.0
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCC-CHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL-~~~ 275 (407)
+..++++.+++.|...| |+.+-..+++.++.+++. +++||..-+-+.++.++.++...| +|.|.+-.... .-.
T Consensus 222 ~a~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 296 (393)
T 2og9_A 222 TAQRMCRIFEPFNLVWI----EEPLDAYDHEGHAALALQ-FDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGIT 296 (393)
T ss_dssp HHHHHHHHHGGGCCSCE----ECCSCTTCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHH
T ss_pred HHHHHHHHHHhhCCCEE----ECCCCcccHHHHHHHHHh-CCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHH
Confidence 45567777888887655 445556789999999987 899999999999999999987776 89988876654 345
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCHHH
Q 015424 276 DIRYMTKICKLLGLTALVEVHDERE 300 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVEVht~eE 300 (407)
+..++.+.|+..|+.++ +|...+
T Consensus 297 ~~~~i~~~A~~~gi~~~--~h~~~~ 319 (393)
T 2og9_A 297 PFLKIASLAEHAGLMLA--PHFAME 319 (393)
T ss_dssp HHHHHHHHHHHTTCEEC--CCSCHH
T ss_pred HHHHHHHHHHHcCCEEe--ccCccH
Confidence 67788999999999977 455444
No 371
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=92.54 E-value=0.13 Score=51.36 Aligned_cols=74 Identities=20% Similarity=0.119 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCCCHHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPDLD 276 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~~~ 276 (407)
+..++|+.+++.|++.|+|-.-. + |. +.+..||+. +++||+.-..| ++.+..++...| ||.|.+.-.+|.+.+
T Consensus 251 ~~~~la~~l~~~Gvd~i~v~~~~--~-~~-~~~~~ik~~-~~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~ladPd 324 (361)
T 3gka_A 251 TFGHVARELGRRRIAFLFARESF--G-GD-AIGQQLKAA-FGGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIANPD 324 (361)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC--S-TT-CCHHHHHHH-HCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred HHHHHHHHHHHcCCCEEEECCCC--C-CH-HHHHHHHHH-cCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcH
Confidence 35778999999999999986422 2 22 567889987 89999977666 999999999888 999999888886666
Q ss_pred H
Q 015424 277 I 277 (407)
Q Consensus 277 L 277 (407)
|
T Consensus 325 l 325 (361)
T 3gka_A 325 L 325 (361)
T ss_dssp H
T ss_pred H
Confidence 5
No 372
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=92.48 E-value=4.1 Score=37.75 Aligned_cols=130 Identities=18% Similarity=0.063 Sum_probs=84.3
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCc-EEEEEecCCcCCCCHHHHHHHHhcCCCCcE--Ee-ccccCCH
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAA-CLSILTDEKYFKGSFENLEAVRSAGVKCPL--LC-KEFIVDA 251 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~-aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV--L~-KDFIid~ 251 (407)
+..+..|+|...... ....-...+++...+.|.. -+-+- . =+++.|..+|+...++|+ |. .....++
T Consensus 108 ~~~l~iEiK~~~~~~---~~~~~~~~v~~~l~~~~~~~~v~i~----S--f~~~~l~~~~~~~p~~~~~~l~~~~~~~~~ 178 (258)
T 2o55_A 108 NLKLNLELKGEEWKR---KESGDHQRLLLLVEKYHMQERVDYC----S--FHHEALAHLKALCPDVKITYLFNYMGQPTP 178 (258)
T ss_dssp CCEEEEEECCSSSSS---TTSSHHHHHHHHHHTTTCGGGEEEE----E--SSHHHHHHHHHHCTTCEEEEECCTTSCCCC
T ss_pred ceEEEEEEccCCccc---cchHHHHHHHHHHHHcCCCCCEEEE----e--CCHHHHHHHHHHCCCCcEEEEEeCCCCCCH
Confidence 578999999654210 1111234566777776643 11111 1 157888888875345664 33 3333344
Q ss_pred HHH-HHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEe-----CCHHHHHHHhcccCCcEEEeeccc
Q 015424 252 WQI-YYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEV-----HDEREMDRVLGIEGIELIGINNRN 319 (407)
Q Consensus 252 ~QI-~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEV-----ht~eElerAl~l~Ga~iIGINnRd 319 (407)
++. ..++..|++.|.+....++. .+++.+++.|+.+++=+ .+.+++++.+++ |++.|-.+..+
T Consensus 179 ~~~~~~~~~~~~~~v~~~~~~~~~----~~v~~~~~~G~~v~~wTv~~~~n~~~~~~~l~~~-GvdgI~TD~p~ 247 (258)
T 2o55_A 179 LDFVEQACYGDANGVSMLFHYLTK----EQVCTAHEKGLSVTVWMPWIFDDSEEDWKKCLEL-QVDLICSNYPF 247 (258)
T ss_dssp TTHHHHHHHTTCSEEEEEGGGCCH----HHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHH-TCSEEEESCHH
T ss_pred HHHHHHHHhcCCeEEecChhhcCH----HHHHHHHHCCCEEEEeeCCCCCCCHHHHHHHHHc-CCCEEEeCCHH
Confidence 433 33678999999998887764 37788999999996654 588999999997 99888776443
No 373
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=92.47 E-value=0.93 Score=45.02 Aligned_cols=92 Identities=13% Similarity=0.125 Sum_probs=70.8
Q ss_pred CHHHHHHHHHH--cCCcEEEEEecCCcCCCCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCCC
Q 015424 198 DPVEIARSYEK--GGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP 273 (407)
Q Consensus 198 dp~~iA~ay~~--~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~ 273 (407)
+..++++.+++ .|...| |+.+-..+++.++.+++. + ++||...+-+ +++++.++...| +|.|.+. =+
T Consensus 205 ~a~~~~~~l~~~g~~i~~i----EqP~~~~~~~~~~~l~~~-~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik---GG 275 (389)
T 2oz8_A 205 EALTKLVAIREAGHDLLWV----EDPILRHDHDGLRTLRHA-VTWTQINSGEYL-DLQGKRLLLEAHAADILNVH---GQ 275 (389)
T ss_dssp HHHHHHHHHHHTTCCCSEE----ESCBCTTCHHHHHHHHHH-CCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC---SC
T ss_pred HHHHHHHHHHhcCCCceEE----eCCCCCcCHHHHHHHHhh-CCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC---cC
Confidence 45567888888 554432 455666789999999987 8 8999999999 999999887776 7888887 23
Q ss_pred HHHHHHHHHHHHHcCCcEEEE-eCCH
Q 015424 274 DLDIRYMTKICKLLGLTALVE-VHDE 298 (407)
Q Consensus 274 ~~~L~~Li~~a~~LGL~aLVE-Vht~ 298 (407)
-.+...+.+.|+..|+.+++- +..+
T Consensus 276 it~a~~i~~~A~~~gi~~~~~~~~~e 301 (389)
T 2oz8_A 276 VTDVMRIGWLAAELGIPISIGNTFLE 301 (389)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCGGG
T ss_pred HHHHHHHHHHHHHcCCeEeecccHHH
Confidence 345677888999999998877 4433
No 374
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=92.43 E-value=0.62 Score=44.14 Aligned_cols=91 Identities=16% Similarity=0.211 Sum_probs=60.4
Q ss_pred CCcEEEEeC------------CHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCC
Q 015424 288 GLTALVEVH------------DEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKN 355 (407)
Q Consensus 288 GL~aLVEVh------------t~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~ 355 (407)
|+..+.||. +..++-++....||+.|-+..- - .-|.-.++....+.+. -+
T Consensus 45 ~~~~IaE~k~aSPskg~i~~~~p~~~A~~~~~~GA~~isvlt~-~---------~~f~G~~~~l~~i~~~--------v~ 106 (254)
T 1vc4_A 45 GLSVIAEVKRQSPSEGLIREVDPVEAALAYARGGARAVSVLTE-P---------HRFGGSLLDLKRVREA--------VD 106 (254)
T ss_dssp SCEEEEEECSCCTTTCCCCSCCHHHHHHHHHHTTCSEEEEECC-C---------SSSCCCHHHHHHHHHH--------CC
T ss_pred CCcEEeeecCCCcCCCcCCCCCHHHHHHHHHHcCCCEEEEecc-h---------hhhccCHHHHHHHHHh--------cC
Confidence 555666664 4455544443359999988421 1 2233344444444432 35
Q ss_pred ceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHH
Q 015424 356 IIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGI 397 (407)
Q Consensus 356 v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i 397 (407)
+++..-.+|.++.++..+..+|||+|++|.+.+. .+..+.+
T Consensus 107 lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~-~~l~~l~ 147 (254)
T 1vc4_A 107 LPLLRKDFVVDPFMLEEARAFGASAALLIVALLG-ELTGAYL 147 (254)
T ss_dssp SCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHG-GGHHHHH
T ss_pred CCEEECCcCCCHHHHHHHHHcCCCEEEECccchH-HHHHHHH
Confidence 6788899999999999999999999999999887 5444433
No 375
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=92.41 E-value=0.29 Score=48.10 Aligned_cols=134 Identities=19% Similarity=0.241 Sum_probs=84.4
Q ss_pred CCccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCc--------EEEEEecCCcCCCCH-HH
Q 015424 159 PARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAA--------CLSILTDEKYFKGSF-EN 229 (407)
Q Consensus 159 ~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~--------aISVLTd~~~F~Gs~-ed 229 (407)
..+.|.++++. ....|+.=.|-.|-- + ...+ .+..-||+. +|-+-..=-.|-|+. +-
T Consensus 132 ~T~~~v~~~~~------~~~~i~dTRKT~PGl---R---~lek--yAV~~GGg~nHR~gL~D~vLIKdNHi~~~G~i~~A 197 (300)
T 3l0g_A 132 ITRQFVDEVSG------TKVKIRSTRKTTPGL---R---MLDK--YSVCIGGGESYRDNLCDGVLIKDNHIASCGSITLA 197 (300)
T ss_dssp HHHHHHHHTTT------SSCEEECCSCCCTTC---H---HHHH--HHHHHTTCBCSCSSTTSCEEECHHHHHHHSCHHHH
T ss_pred HHHHHHHHhCC------CCEEEeecCccChhh---h---HHHH--HHHHhcCCcccccCCcceEEEcHhHHHHhCCHHHH
Confidence 34567766653 236788888888842 1 1111 122345552 222211111244554 45
Q ss_pred HHHHHhcCCCCcEE--eccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHH
Q 015424 230 LEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRV 304 (407)
Q Consensus 230 L~~Vr~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~eElerA 304 (407)
++.+|+....+||. +.. ..|+.+|..+|||.|+|.- ++++++++.++..+. .+.+|++ |++.+...
T Consensus 198 v~~ar~~~p~~kIeVEv~t----l~e~~eAl~aGaDiImLDn--~s~~~l~~av~~~~~---~v~leaSGGIt~~~i~~~ 268 (300)
T 3l0g_A 198 IQRLRKNLKNEYIAIECDN----ISQVEESLSNNVDMILLDN--MSISEIKKAVDIVNG---KSVLEVSGCVNIRNVRNI 268 (300)
T ss_dssp HHHHHHHSSSCCEEEEESS----HHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHHTT---SSEEEEESSCCTTTHHHH
T ss_pred HHHHHHhCCCCCEEEEECC----HHHHHHHHHcCCCEEEECC--CCHHHHHHHHHhhcC---ceEEEEECCCCHHHHHHH
Confidence 66677542345544 444 4789999999999999975 677788887776542 6889997 88888888
Q ss_pred hcccCCcEEEee
Q 015424 305 LGIEGIELIGIN 316 (407)
Q Consensus 305 l~l~Ga~iIGIN 316 (407)
.+. |+|+|++.
T Consensus 269 A~t-GVD~IsvG 279 (300)
T 3l0g_A 269 ALT-GVDYISIG 279 (300)
T ss_dssp HTT-TCSEEECG
T ss_pred HHc-CCCEEEeC
Confidence 886 99999984
No 376
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=92.38 E-value=0.17 Score=50.75 Aligned_cols=78 Identities=19% Similarity=0.077 Sum_probs=59.4
Q ss_pred CHHHHHHHHHHcCCcEEEEEecC--CcCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCCC
Q 015424 198 DPVEIARSYEKGGAACLSILTDE--KYFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP 273 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~--~~F~G-s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~ 273 (407)
+..++|+.+++.|++.|+|-.-. ..+.+ ..+.+..||+. +++||+.-..| ++.+..++.+.| ||.|.+.-.++.
T Consensus 256 ~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~-~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~ 333 (377)
T 2r14_A 256 MAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQR-FKGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIA 333 (377)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHH-CCCCEEEECCC-CHHHHHHHHHCCCceEEeecHHHHh
Confidence 46778999999999999996410 01111 45667889987 89999987766 699999999988 999999888886
Q ss_pred HHHH
Q 015424 274 DLDI 277 (407)
Q Consensus 274 ~~~L 277 (407)
+.+|
T Consensus 334 ~P~l 337 (377)
T 2r14_A 334 NPDL 337 (377)
T ss_dssp CTTH
T ss_pred CchH
Confidence 6555
No 377
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=92.32 E-value=1.5 Score=42.65 Aligned_cols=143 Identities=15% Similarity=0.161 Sum_probs=92.1
Q ss_pred HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHH
Q 015424 227 FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDR 303 (407)
Q Consensus 227 ~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~eEler 303 (407)
+.-|+.+++. ..+|++.- +.|+.++.....+ +|.+-+.+.-+.+.+ |++.+..+|..+++... +.+|++.
T Consensus 80 L~~L~~~~~e-~Glp~~Te--v~d~~~v~~l~~~-vd~lqIgA~~~~n~~---LLr~va~~gkPVilK~G~~~t~~ei~~ 152 (285)
T 3sz8_A 80 LKIFAEVKAR-FGVPVITD--VHEAEQAAPVAEI-ADVLQVPAFLARQTD---LVVAIAKAGKPVNVKKPQFMSPTQLKH 152 (285)
T ss_dssp HHHHHHHHHH-HCCCEEEE--CCSGGGHHHHHTT-CSEEEECGGGTTCHH---HHHHHHHTSSCEEEECCTTSCGGGTHH
T ss_pred HHHHHHHHHh-cCCeEEEE--eCCHHHHHHHHHh-CCEEEECccccCCHH---HHHHHHccCCcEEEeCCCCCCHHHHHH
Confidence 5566667655 68999854 3678888888777 999999887776654 44555578999988875 6667665
Q ss_pred Hhcc---cCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEe---------------eCCC
Q 015424 304 VLGI---EGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGE---------------SGLF 365 (407)
Q Consensus 304 Al~l---~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAE---------------SGI~ 365 (407)
|++. .|.+-|.+-.|.. -|+| .+..+|+.....|.+.. .+++|+.- +|-.
T Consensus 153 ave~i~~~Gn~~i~L~erg~---~y~~--~~~~vdl~~i~~lk~~~-------~~~pV~~D~sHs~q~p~~~~~~s~G~r 220 (285)
T 3sz8_A 153 VVSKCGEVGNDRVMLCERGS---SFGY--DNLVVDMLGFRQMAETT-------GGCPVIFDVTHSLQCRDPLGDASGGRR 220 (285)
T ss_dssp HHHHHHHTTCCCEEEEECCE---ECSS--SCEECCTTHHHHHHHHT-------TSCCEEEETTTTCC-------------
T ss_pred HHHHHHHcCCCcEEEEeCCC---CCCC--CcCccCHHHHHHHHHhC-------CCCCEEEeCCCccccCCCcCCCCCCch
Confidence 5432 3666666666654 2333 45668998876665531 13556552 2211
Q ss_pred C--HHHHHHHHHcCCCEEEEccccc
Q 015424 366 T--PDDIAYVQEAGVKAVLVGESIV 388 (407)
Q Consensus 366 t--~eD~~~l~~~GadaVLVGeaLm 388 (407)
. +.-......+||+|++|-.-+.
T Consensus 221 ~~v~~~a~AAvA~GA~gl~IE~H~~ 245 (285)
T 3sz8_A 221 RQVLDLARAGIAVGIAGLFLEAHPD 245 (285)
T ss_dssp --HHHHHHHHHHHCCSEEEEEEESC
T ss_pred hhHHHHHHHHHHhCCCEEEEEeccC
Confidence 1 3344566788999999965543
No 378
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=92.32 E-value=3.4 Score=38.07 Aligned_cols=91 Identities=19% Similarity=0.117 Sum_probs=54.6
Q ss_pred HHHcCCcEEEEeCCHHHHHHHhcccC-CcEEEeeccccccccccccccccccC-chhHHHHhhcccccccccCCceEEEe
Q 015424 284 CKLLGLTALVEVHDEREMDRVLGIEG-IELIGINNRNLAISIFSYRTETFEVD-NSNTKKLLEGERGEIIRQKNIIVVGE 361 (407)
Q Consensus 284 a~~LGL~aLVEVht~eElerAl~l~G-a~iIGINnRdL~~~~~~~t~~Tf~vD-l~~t~~L~~~~~~~~i~~~~v~vVAE 361 (407)
....|.. +.++.|.+|+...+.... +++|=+ |+ .-...| ++...+|.+. .+...+++|.-
T Consensus 144 L~~~~~~-v~~a~~~~eal~~l~~~~~~dlvll---D~---------~mP~~dG~~l~~~lr~~-----~~~~~~~ii~~ 205 (259)
T 3luf_A 144 LRKQLLQ-VHEASHAREALATLEQHPAIRLVLV---DY---------YMPEIDGISLVRMLRER-----YSKQQLAIIGI 205 (259)
T ss_dssp HHTTTCE-EEEESSHHHHHHHHHHCTTEEEEEE---CS---------CCSSSCHHHHHHHHHHH-----CCTTTSEEEEE
T ss_pred HHHcCcE-EEEeCCHHHHHHHHhcCCCCCEEEE---cC---------CCCCCCHHHHHHHHHhc-----cCCCCCeEEEE
Confidence 3344554 567888888877665312 344443 33 111112 2333444332 11135788889
Q ss_pred eCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHH
Q 015424 362 SGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGI 397 (407)
Q Consensus 362 SGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i 397 (407)
++-.+.++..++.++|++++ |.|+-++.+..
T Consensus 206 s~~~~~~~~~~a~~~Ga~~y-----l~KP~~~~~L~ 236 (259)
T 3luf_A 206 SVSDKRGLSARYLKQGANDF-----LNQPFEPEELQ 236 (259)
T ss_dssp ECSSSSSHHHHHHHTTCSEE-----EESSCCHHHHH
T ss_pred EccCCHHHHHHHHhcChhhe-----EcCCCCHHHHH
Confidence 99999999999999999998 45666765443
No 379
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=92.19 E-value=0.45 Score=46.40 Aligned_cols=134 Identities=14% Similarity=0.196 Sum_probs=84.4
Q ss_pred CCccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCc--------EEEEEecCCcCCCCH-HH
Q 015424 159 PARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAA--------CLSILTDEKYFKGSF-EN 229 (407)
Q Consensus 159 ~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~--------aISVLTd~~~F~Gs~-ed 229 (407)
..+.|.++++. ....|+.-.|..|--.. ..+ .+..-||+. ++-+-..=-.|-|+. +-
T Consensus 123 ~t~~~v~~~~g------~~~~i~dTRKT~PglR~------l~k--yAV~~GGg~nHR~gL~d~vlikdNHi~~~G~i~~A 188 (287)
T 3tqv_A 123 VTNKLVKLISQ------YKTKLLDTRKTIPGFRL------AQK--YAVRCGGGFNHRIGLFDAYLIKENHIRSAGGIAKA 188 (287)
T ss_dssp HHHHHHHHHTT------SSCEEECCSCCCTTCHH------HHH--HHHHHTTCBCCCSSSSSSEEECTTTC----CHHHH
T ss_pred HHHHHHHHhCC------CCeEEEeecccCcchHH------HHH--HHHHhcCchheeccCccEEEEeHHHHHHhCCHHHH
Confidence 45677777763 24688888888884211 111 222345552 333221112355665 45
Q ss_pred HHHHHhcCCCCcEE--eccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHH
Q 015424 230 LEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRV 304 (407)
Q Consensus 230 L~~Vr~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~eElerA 304 (407)
++.+|+.....||. +.+ ..|+.+|..+|||.|+|.- .+.+++++.++..+ =.+.+|++ |++.+...
T Consensus 189 v~~ar~~~~~~~IeVEv~t----l~ea~eAl~aGaD~I~LDn--~~~~~l~~av~~~~---~~v~ieaSGGIt~~~i~~~ 259 (287)
T 3tqv_A 189 VTKAKKLDSNKVVEVEVTN----LDELNQAIAAKADIVMLDN--FSGEDIDIAVSIAR---GKVALEVSGNIDRNSIVAI 259 (287)
T ss_dssp HHHHHHHCTTSCEEEEESS----HHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHHT---TTCEEEEESSCCTTTHHHH
T ss_pred HHHHHhhCCCCcEEEEeCC----HHHHHHHHHcCCCEEEEcC--CCHHHHHHHHHhhc---CCceEEEECCCCHHHHHHH
Confidence 66777643345655 444 4789999999999999976 66777777776543 26788887 88888888
Q ss_pred hcccCCcEEEee
Q 015424 305 LGIEGIELIGIN 316 (407)
Q Consensus 305 l~l~Ga~iIGIN 316 (407)
.+. |+|+|++.
T Consensus 260 a~t-GVD~IsvG 270 (287)
T 3tqv_A 260 AKT-GVDFISVG 270 (287)
T ss_dssp HTT-TCSEEECS
T ss_pred HHc-CCCEEEEC
Confidence 886 99999984
No 380
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=92.14 E-value=2.1 Score=41.04 Aligned_cols=116 Identities=16% Similarity=0.123 Sum_probs=84.7
Q ss_pred HHHHHHcCCCEEEEeccC--CCHHHHHHHHHHHHHcCCcEEEEeCC--H------------HHHHHHhcccCCcEEEeec
Q 015424 254 IYYARTKGADAVLLIAAV--LPDLDIRYMTKICKLLGLTALVEVHD--E------------REMDRVLGIEGIELIGINN 317 (407)
Q Consensus 254 I~eAr~~GADaVLLiaai--L~~~~L~~Li~~a~~LGL~aLVEVht--~------------eElerAl~l~Ga~iIGINn 317 (407)
+.+++..|-|+|=+-.-. ++.++..++++.+++.|+.++.||.. . +.+++.+++ ||+.|-|..
T Consensus 91 l~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeA-GA~~ViiEa 169 (251)
T 1qwg_A 91 LNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDA-GADYVIIEG 169 (251)
T ss_dssp HHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHH-TCSEEEECC
T ss_pred HHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHHHC-CCcEEEEee
Confidence 667899999999986554 48889999999999999999999985 3 346778887 999999999
Q ss_pred cccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCC
Q 015424 318 RNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVK 379 (407)
Q Consensus 318 RdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~Gad 379 (407)
|.. +.+.|.....-++..+...+++..++ +. -++.|.=- -..+...++..|.+
T Consensus 170 rEs-G~~iGi~~~~g~~r~d~v~~i~~~l~-----~e--klifEAp~-k~qq~~fI~~fG~~ 222 (251)
T 1qwg_A 170 RES-GKGKGLFDKEGKVKENELDVLAKNVD-----IN--KVIFEAPQ-KSQQVAFILKFGSS 222 (251)
T ss_dssp TTT-CCSSTTBCTTSCBCHHHHHHHHTTSC-----GG--GEEEECCS-HHHHHHHHHHHCTT
T ss_pred ecc-cCCcccCCCCCCCcHHHHHHHHHhCC-----hh--hEEEECCC-hHHHHHHHHHhCCC
Confidence 965 33324444555677777777777532 22 46677743 33446677778865
No 381
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=92.12 E-value=6.9 Score=38.60 Aligned_cols=163 Identities=13% Similarity=0.124 Sum_probs=95.4
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCH-HHHHHHHh-cCCCCcEEeccccCCHHH----HHHHHHcCCCEEEEeccC-
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSF-ENLEAVRS-AGVKCPLLCKEFIVDAWQ----IYYARTKGADAVLLIAAV- 271 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~-edL~~Vr~-a~v~lPVL~KDFIid~~Q----I~eAr~~GADaVLLiaai- 271 (407)
.++++.+.+.|+++|-|+. -..++.=+. |..+.++. ..-.+||+..=.-.+..+ ...|..+|||+|+++.-.
T Consensus 50 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y 129 (344)
T 2hmc_A 50 VRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVL 129 (344)
T ss_dssp HHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred HHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCcc
Confidence 3556667889999998872 112222233 33333331 114799997654445432 334677899999998775
Q ss_pred ---CCHHHHHH-HHHHHH-HcCCcEEE-Ee------CCHHHHHHH-hcccCCcEEEeecccccccccccccccccc--Cc
Q 015424 272 ---LPDLDIRY-MTKICK-LLGLTALV-EV------HDEREMDRV-LGIEGIELIGINNRNLAISIFSYRTETFEV--DN 336 (407)
Q Consensus 272 ---L~~~~L~~-Li~~a~-~LGL~aLV-EV------ht~eElerA-l~l~Ga~iIGINnRdL~~~~~~~t~~Tf~v--Dl 336 (407)
.+++.+.. +-..+. ..++.+++ .+ =+.+.+.+. .+. ..|+|| ++-.- |+
T Consensus 130 ~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l~~e~~~~L~a~~--pnIvGi--------------Kdssgp~d~ 193 (344)
T 2hmc_A 130 SRGSVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFALRAEH--KNLVGF--------------KEFGGPADM 193 (344)
T ss_dssp SSTTCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHHHHHC--TTEEEE--------------EECSCHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCcCHHHHHHHHhcC--CCEEEE--------------EcCCCCCCH
Confidence 34555554 444566 56777655 22 155666665 454 579999 44444 67
Q ss_pred hhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHH-HcCCCEEEEccccc
Q 015424 337 SNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQ-EAGVKAVLVGESIV 388 (407)
Q Consensus 337 ~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~-~~GadaVLVGeaLm 388 (407)
....+++... ++++.+ . +|-. +.+.... .+|++|++-|.+=+
T Consensus 194 ~~~~~~~~~~------~~~f~v-~-~G~D--~~~l~~l~~~Ga~G~is~~anv 236 (344)
T 2hmc_A 194 RYAAENITSR------DDEVTL-M-IGVD--TAVVHGFVNCGATGAITGIGNV 236 (344)
T ss_dssp HHHHHHTSCS------SSSCEE-E-ECSG--GGHHHHHHHSCCCEEEESGGGT
T ss_pred HHHHHHHHHc------CCCEEE-E-ECcH--HHHHHHHHHcCCCEEEeCHHHh
Confidence 7777776531 234333 3 3332 2233445 78999999998743
No 382
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=92.06 E-value=0.47 Score=47.29 Aligned_cols=92 Identities=10% Similarity=0.071 Sum_probs=73.0
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHh-cCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCC-CH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRS-AGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PD 274 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~-a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL-~~ 274 (407)
+..++++.+++.|...| |+.+-..+++.++.+++ . +++||...+-+.++.++.++...| +|.|.+-.... +-
T Consensus 210 ~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 284 (401)
T 2hzg_A 210 AAAARLPTLDAAGVLWL----EEPFDAGALAAHAALAGRG-ARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGL 284 (401)
T ss_dssp HHHTTHHHHHHTTCSEE----ECCSCTTCHHHHHHHHTTC-CSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTSH
T ss_pred HHHHHHHHHHhcCCCEE----ECCCCccCHHHHHHHHhhC-CCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCCH
Confidence 45567888889887755 45555678999999998 7 899999999999999998876654 89999976655 34
Q ss_pred HHHHHHHHHHHHcCCcEEEE
Q 015424 275 LDIRYMTKICKLLGLTALVE 294 (407)
Q Consensus 275 ~~L~~Li~~a~~LGL~aLVE 294 (407)
.+..++.+.|+..|+.++.-
T Consensus 285 t~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 285 GPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp HHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHcCCEEecC
Confidence 56678889999999997743
No 383
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=92.05 E-value=3.6 Score=37.89 Aligned_cols=139 Identities=17% Similarity=0.100 Sum_probs=86.1
Q ss_pred cHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHc--CCcEEEEEecCCcCCCCHHHHHHHHhcCCC
Q 015424 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKG--GAACLSILTDEKYFKGSFENLEAVRSAGVK 239 (407)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~--GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~ 239 (407)
.|.+.|..... ++..+..|+|..+.... .....+++...+. |..-+-+- .-+++.|..+|+...+
T Consensus 96 tL~evl~~~~~--~~~~l~iEiK~~~~~~~-----~~~~~v~~~l~~~~~~~~~v~i~------Sf~~~~l~~~~~~~p~ 162 (247)
T 2otd_A 96 LLSQVAERCRE--HGMMANIEIKPTTGTGP-----LTGKMVALAARQLWAGMTPPLLS------SFEIDALEAAQQAAPE 162 (247)
T ss_dssp BHHHHHHHHHH--TTCEEEEEECCCTTCHH-----HHHHHHHHHHHHHTTTSCCCEEE------ESCHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHh--cCCEEEEEECCCCCcch-----HHHHHHHHHHHHHhcCcCCEEEE------cCCHHHHHHHHHHCCC
Confidence 45555544321 35789999996543210 0112445555443 32211111 1268888889875356
Q ss_pred CcE--EeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEE-eCCHHHHHHHhcccCCcEEEee
Q 015424 240 CPL--LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGIELIGIN 316 (407)
Q Consensus 240 lPV--L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVE-Vht~eElerAl~l~Ga~iIGIN 316 (407)
+|+ |....-.+. ...++..|+++|.+....+++ ++++.+++.|+.+++= |.+.+++.+.+++ |++.|-.|
T Consensus 163 ~~~~~l~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~----~~v~~~~~~G~~v~~wTvn~~~~~~~l~~~-GvdgI~TD 235 (247)
T 2otd_A 163 LPRGLLLDEWRDDW--RELTARLGCVSIHLNHKLLDK----ARVMQLKDAGLRILVYTVNKPQHAAELLRW-GVDCICTD 235 (247)
T ss_dssp SCEEEEESSCCTTH--HHHHHHHTCSEEEEEGGGCCH----HHHHHHHHTTCEEEEECCCCHHHHHHHHHH-TCSEEEES
T ss_pred CCEEEEecCCcccH--HHHHHHcCCeEEecChHhCCH----HHHHHHHHCCCEEEEEccCCHHHHHHHHHc-CCCEEEeC
Confidence 665 333222222 233667899999998888764 4778899999998654 6799999999998 99988887
Q ss_pred cccc
Q 015424 317 NRNL 320 (407)
Q Consensus 317 nRdL 320 (407)
..++
T Consensus 236 ~p~~ 239 (247)
T 2otd_A 236 AIDV 239 (247)
T ss_dssp CTTT
T ss_pred CHHH
Confidence 6554
No 384
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=92.02 E-value=0.25 Score=53.08 Aligned_cols=45 Identities=9% Similarity=0.118 Sum_probs=41.5
Q ss_pred CceEEEeeCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHh
Q 015424 355 NIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITG 399 (407)
Q Consensus 355 ~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~ 399 (407)
++++|+-|||.+++++..+.+.| ||+|.+|.+++..+|...++++
T Consensus 291 ~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~ 336 (729)
T 1o94_A 291 KKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVEQ 336 (729)
T ss_dssp SSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTTHHHHHHT
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCchHHHHHHc
Confidence 57899999999999999999998 9999999999999998877764
No 385
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=91.92 E-value=0.18 Score=51.03 Aligned_cols=44 Identities=16% Similarity=0.051 Sum_probs=40.2
Q ss_pred CceEEEeeCCCCHHHHHHHHHcC-CCEEEEcccccCCCChHHHHHh
Q 015424 355 NIIVVGESGLFTPDDIAYVQEAG-VKAVLVGESIVKQDDPGKGITG 399 (407)
Q Consensus 355 ~v~vVAESGI~t~eD~~~l~~~G-adaVLVGeaLmk~~dp~~~i~~ 399 (407)
++++|+-||| +++++.++.+.| ||+|.+|.+++..++....+++
T Consensus 319 ~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k~~~ 363 (402)
T 2hsa_B 319 QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKL 363 (402)
T ss_dssp SSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred CCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHhCchHHHHHHh
Confidence 4689999999 999999999998 9999999999999998887764
No 386
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=91.85 E-value=0.42 Score=46.92 Aligned_cols=94 Identities=13% Similarity=0.119 Sum_probs=73.5
Q ss_pred CHH-HHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHc-CCCEEEEeccCC-CH
Q 015424 198 DPV-EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK-GADAVLLIAAVL-PD 274 (407)
Q Consensus 198 dp~-~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~-GADaVLLiaaiL-~~ 274 (407)
+.. ++++.+++.|...| |+.+-..+++.++.+++. +++||...+-+.+++++.++... ++|.|.+..... +-
T Consensus 200 ~a~~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 274 (369)
T 2p8b_A 200 ANTLTALRSLGHLNIDWI----EQPVIADDIDAMAHIRSK-TDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGI 274 (369)
T ss_dssp HHHHHHHHTSTTSCCSCE----ECCBCTTCHHHHHHHHHT-CCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSH
T ss_pred HHHHHHHHHHHhCCCcEE----ECCCCcccHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCH
Confidence 455 67777788886654 344566789999999986 89999999999999999887665 589999977655 34
Q ss_pred HHHHHHHHHHHHcCCcEEEEeC
Q 015424 275 LDIRYMTKICKLLGLTALVEVH 296 (407)
Q Consensus 275 ~~L~~Li~~a~~LGL~aLVEVh 296 (407)
.+...+.+.|+..|+.+++-+.
T Consensus 275 t~~~~i~~~A~~~g~~~~~~~~ 296 (369)
T 2p8b_A 275 YPAVKLAHQAEMAGIECQVGSM 296 (369)
T ss_dssp HHHHHHHHHHHHTTCEEEECCS
T ss_pred HHHHHHHHHHHHcCCcEEecCC
Confidence 5677888999999999876543
No 387
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=91.80 E-value=5.3 Score=37.80 Aligned_cols=172 Identities=14% Similarity=0.239 Sum_probs=94.1
Q ss_pred HHHHHHHcCCcEEEEEecCCcCCCCHHHHH-HHHhc-CCCC-cEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHH
Q 015424 202 IARSYEKGGAACLSILTDEKYFKGSFENLE-AVRSA-GVKC-PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (407)
Q Consensus 202 iA~ay~~~GA~aISVLTd~~~F~Gs~edL~-~Vr~a-~v~l-PVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~ 278 (407)
++......|+++|-+-.|..-+ ..+.+. .++.. .... |++|=.- .+++.|..+...|+|+|++ -.+-+.++++
T Consensus 29 ~~e~a~~~g~D~vilDlEhav~--~~~k~~~~l~a~~~~~~~~~VRVn~-~~~~di~~~ld~G~~gI~l-P~v~saed~~ 104 (261)
T 3qz6_A 29 IVRIYAEAGLDYFIVDCEHAAY--TFREINHLVSVAKNAGVSVLVRIPQ-VDRAHVQRLLDIGAEGFMI-PGVQSAETMR 104 (261)
T ss_dssp HHHHHHHTTCSEEEEESSSSCC--CHHHHHHHHHHHHHHTCEEEEECSS-CCHHHHHHHHHHTCCEEEE-TTCCSHHHHH
T ss_pred HHHHHhcCCcCEEEEeccCCCC--CHHHHHHHHHHHhhcCCeEEEEeCC-CCHHHHHHHHhcCCCEEEE-CCcCCHHHHH
Confidence 4455566799998775554322 222222 22210 0133 4454332 5788999999999999876 6677888888
Q ss_pred HHHHHHHH---------------c--------------CCcEEEEeCCHHHHHH---HhcccCCcEEEeecccccccccc
Q 015424 279 YMTKICKL---------------L--------------GLTALVEVHDEREMDR---VLGIEGIELIGINNRNLAISIFS 326 (407)
Q Consensus 279 ~Li~~a~~---------------L--------------GL~aLVEVht~eEler---Al~l~Ga~iIGINnRdL~~~~~~ 326 (407)
.+.+.++. + .+.+++=+-|.+-+.. .+...+.+.+.|..-||.... +
T Consensus 105 ~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~~~eIaa~~~vd~l~iG~~DL~~~l-g 183 (261)
T 3qz6_A 105 ETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVEDIDSILAVQGVDAVIFGPRDLSNDL-G 183 (261)
T ss_dssp HHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHTHHHHHTSTTCCEEEECHHHHHHHT-T
T ss_pred HHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHHHHHHhCCCCCCEEEECHHHHHHHh-C
Confidence 88887631 1 2334444444443333 233346787877777884433 2
Q ss_pred ccccccccCchhH-HHHhhcccccccccCCceEEEeeCCCCHHHH-HHHHHcCCCEEEEcc
Q 015424 327 YRTETFEVDNSNT-KKLLEGERGEIIRQKNIIVVGESGLFTPDDI-AYVQEAGVKAVLVGE 385 (407)
Q Consensus 327 ~t~~Tf~vDl~~t-~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~-~~l~~~GadaVLVGe 385 (407)
+........+... .+++...+. .++.+-.-+ .+++.+ ..+.+.|++-+.+|.
T Consensus 184 ~~~~~~~p~v~~a~~~iv~aa~a-----aG~~~g~~~--~~~~~~~~~~~~~G~~~~s~~~ 237 (261)
T 3qz6_A 184 IIGQTEHPKVYECYEKVYRAADR-----QGVVKGFFT--AADAAKMGWAVERGAQMLLWSG 237 (261)
T ss_dssp CTTCTTCHHHHHHHHHHHHHHHH-----HTCEEEEEE--SSCGGGGHHHHHTTCCEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHH-----hCCCEEEEe--CCHHHHHHHHHHCCCCEEEEhh
Confidence 2211111111111 122221111 233332222 388899 999999999999996
No 388
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=91.79 E-value=0.32 Score=48.81 Aligned_cols=75 Identities=17% Similarity=0.082 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHcCCcEEEEEec---CCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCCC
Q 015424 198 DPVEIARSYEKGGAACLSILTD---EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP 273 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd---~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~ 273 (407)
+..++|+.+++.|++.|+|-.- +..+. .+ +..+|+. +++||+.-..| ++.+..++...| ||.|.+.-.++.
T Consensus 267 ~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~--~~-~~~ir~~-~~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~ 341 (379)
T 3aty_A 267 LTKHLCKKIEPLSLAYLHYLRGDMVNQQIG--DV-VAWVRGS-YSGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIA 341 (379)
T ss_dssp HHHHHHHHHGGGCCSEEEEECSCTTSCCCC--CH-HHHHHTT-CCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEcCCCcCCCCcc--HH-HHHHHHH-CCCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHh
Confidence 4577899999999999999741 11121 25 8899987 89999987766 899999999888 999999888776
Q ss_pred HHHH
Q 015424 274 DLDI 277 (407)
Q Consensus 274 ~~~L 277 (407)
+.+|
T Consensus 342 ~P~l 345 (379)
T 3aty_A 342 NPDL 345 (379)
T ss_dssp CTTH
T ss_pred CcHH
Confidence 5555
No 389
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=91.73 E-value=4.9 Score=37.18 Aligned_cols=138 Identities=12% Similarity=0.055 Sum_probs=87.4
Q ss_pred cHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCc-EEEEEecCCcCCCCHHHHHHHHhcCCCC
Q 015424 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAA-CLSILTDEKYFKGSFENLEAVRSAGVKC 240 (407)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~-aISVLTd~~~F~Gs~edL~~Vr~a~v~l 240 (407)
.|.+.|.... ..+..+..|+|..... ...-...+++...+.|.. .+-+- .-+.+.|..+|+...++
T Consensus 101 tL~evL~~~~--~~~~~l~iEiK~~~~~-----~~~~~~~v~~~l~~~~~~~~vii~------SF~~~~l~~~~~~~p~~ 167 (252)
T 2pz0_A 101 TLYEVFELIG--DKDFLVNIEIKSGIVL-----YPGIEEKLIKAIKEYNFEERVIIS------SFNHYSLRDVKKMAPHL 167 (252)
T ss_dssp BHHHHHHHHT--TSCCEEEEEECCSSCC-----CTTHHHHHHHHHHHTTCTTTEEEE------ESBHHHHHHHHHHCTTS
T ss_pred CHHHHHHHhh--hcCCeEEEEeCCCCcc-----cHHHHHHHHHHHHhcCCCCCEEEE------eCCHHHHHHHHHHCCCC
Confidence 4666665542 1357899999964321 011224556666666643 12121 13578888888753456
Q ss_pred cE--EeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEE-EeCCHHHHHHHhcccCCcEEEeec
Q 015424 241 PL--LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGIELIGINN 317 (407)
Q Consensus 241 PV--L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLV-EVht~eElerAl~l~Ga~iIGINn 317 (407)
|+ |..+...+. ...++..|++++......+++ .+++.+++.|+.+++ -|.+.+++.+.+++ |++.|-.+.
T Consensus 168 ~~~~l~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~----~~v~~~~~~G~~v~~wTvn~~~~~~~l~~~-GvdgIiTD~ 240 (252)
T 2pz0_A 168 KIGLLYQCGLVEP--WHMALRMEAYSLHPFYFNIIP----ELVEGCKKNGVKLFPWTVDRKEDMERMIKA-GVDGIITDD 240 (252)
T ss_dssp EEEEEECSBCSST--HHHHHHTTCSEEEEBGGGCCH----HHHHHHHHTTCEECCBCCCSHHHHHHHHHH-TCSEEEESC
T ss_pred CEEEEecCccccH--HHHHHHcCCeEEecchhcCCH----HHHHHHHHCCCEEEEECCCCHHHHHHHHHc-CCCEEEcCC
Confidence 64 333332232 234667899999998877764 477889999998743 37899999999998 998877764
Q ss_pred cc
Q 015424 318 RN 319 (407)
Q Consensus 318 Rd 319 (407)
.+
T Consensus 241 P~ 242 (252)
T 2pz0_A 241 PE 242 (252)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 390
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=91.71 E-value=1.2 Score=41.61 Aligned_cols=128 Identities=15% Similarity=0.231 Sum_probs=80.0
Q ss_pred CcEEeccccCCHHHHHHH-HHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEE---eCCHHHHHHHhcccCCcEEEe
Q 015424 240 CPLLCKEFIVDAWQIYYA-RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE---VHDEREMDRVLGIEGIELIGI 315 (407)
Q Consensus 240 lPVL~KDFIid~~QI~eA-r~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVE---Vht~eElerAl~l~Ga~iIGI 315 (407)
+||++-+-.-+-.++.+| .+.|++.+=+ +..++..++.+-...+++. +++|- |-|.++++.+.++ |+++|-.
T Consensus 16 i~Vir~~~~~~a~~~a~al~~gGi~~iEv--t~~t~~a~~~I~~l~~~~p-~~~IGAGTVlt~~~a~~ai~A-GA~fivs 91 (217)
T 3lab_A 16 IPVIVIDDLVHAIPMAKALVAGGVHLLEV--TLRTEAGLAAISAIKKAVP-EAIVGAGTVCTADDFQKAIDA-GAQFIVS 91 (217)
T ss_dssp EEEECCSCGGGHHHHHHHHHHTTCCEEEE--ETTSTTHHHHHHHHHHHCT-TSEEEEECCCSHHHHHHHHHH-TCSEEEE
T ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCEEEE--eCCCccHHHHHHHHHHHCC-CCeEeeccccCHHHHHHHHHc-CCCEEEe
Confidence 688887766666677766 5668887655 3344545555555555553 23333 5599999999997 9999865
Q ss_pred eccccccccccccccccccCchhHHHHhhcccccccccCCc------eEEEeeCCCCHHHHHHHHHcCCCEEEEcccccC
Q 015424 316 NNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNI------IVVGESGLFTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 316 NnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v------~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
-+- |.+......+ .++ +++. |+.|++++.+..++|+|.+ .++-
T Consensus 92 P~~----------------~~evi~~~~~---------~~v~~~~~~~~~P--G~~TptE~~~A~~~Gad~v----K~FP 140 (217)
T 3lab_A 92 PGL----------------TPELIEKAKQ---------VKLDGQWQGVFLP--GVATASEVMIAAQAGITQL----KCFP 140 (217)
T ss_dssp SSC----------------CHHHHHHHHH---------HHHHCSCCCEEEE--EECSHHHHHHHHHTTCCEE----EETT
T ss_pred CCC----------------cHHHHHHHHH---------cCCCccCCCeEeC--CCCCHHHHHHHHHcCCCEE----EECc
Confidence 221 2222222111 133 4444 8999999999999999988 3343
Q ss_pred CCCh--HHHHHhhhc
Q 015424 390 QDDP--GKGITGLFG 402 (407)
Q Consensus 390 ~~dp--~~~i~~L~~ 402 (407)
.... ...++.|.+
T Consensus 141 a~~~gG~~~lkal~~ 155 (217)
T 3lab_A 141 ASAIGGAKLLKAWSG 155 (217)
T ss_dssp TTTTTHHHHHHHHHT
T ss_pred cccccCHHHHHHHHh
Confidence 3322 356666643
No 391
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=91.67 E-value=0.48 Score=45.43 Aligned_cols=55 Identities=13% Similarity=0.071 Sum_probs=43.8
Q ss_pred HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHH----HHHHHHHHH
Q 015424 227 FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL----DIRYMTKIC 284 (407)
Q Consensus 227 ~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~----~L~~Li~~a 284 (407)
.+.++.+|+. +++||++.-.|-++.|+.++ .|||+|+.+.++.... .+.+|++..
T Consensus 191 ~~~v~~vr~~-~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~~~~~~~~~~~fv~~l 249 (271)
T 1ujp_A 191 KDLVRRIKAR-TALPVAVGFGVSGKATAAQA--AVADGVVVGSALVRALEEGRSLAPLLQEI 249 (271)
T ss_dssp HHHHHHHHTT-CCSCEEEESCCCSHHHHHHH--TTSSEEEECHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHhh-cCCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHhcccchHHHHHHHHHHH
Confidence 5788999986 79999999888889999997 8999999998877442 244454443
No 392
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=91.66 E-value=0.39 Score=48.01 Aligned_cols=121 Identities=10% Similarity=-0.002 Sum_probs=87.7
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....|....- |-+....+..++++.+++.|...| |+..-..+++.+..+|+. +++||
T Consensus 189 ~v~avR~a~--G~d~~l~vDan------~~~~~~~~A~~~~~~L~~~~i~~i----EeP~~~~~~~~~~~l~~~-~~iPI 255 (394)
T 3mqt_A 189 YLRELREVI--GWDMDMMVDCL------YRWTDWQKARWTFRQLEDIDLYFI----EACLQHDDLIGHQKLAAA-INTRL 255 (394)
T ss_dssp HHHHHHHHH--CSSSEEEEECT------TCCSCHHHHHHHHHHTGGGCCSEE----ESCSCTTCHHHHHHHHHH-SSSEE
T ss_pred HHHHHHHHh--CCCCeEEEECC------CCCCCHHHHHHHHHHHhhcCCeEE----ECCCCcccHHHHHHHHhh-CCCCE
Confidence 345566543 12356776531 212112245678888888887665 455666789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHc-CCCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEEeCCH
Q 015424 243 LCKEFIVDAWQIYYARTK-GADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEVHDE 298 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~-GADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVEVht~ 298 (407)
...+-+.++++..++... .+|.|.+...... -.+...+...|+.+|+.++ +|+.
T Consensus 256 a~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~--~h~~ 311 (394)
T 3mqt_A 256 CGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIMDICEHHNAQLM--PHNW 311 (394)
T ss_dssp EECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHHHHHHHHTCEEC--CCCC
T ss_pred EeCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEe--ccCC
Confidence 999999999999888765 5899999888774 4567788999999999987 5664
No 393
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=91.64 E-value=0.6 Score=46.44 Aligned_cols=93 Identities=14% Similarity=0.207 Sum_probs=73.2
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHc-CCCEEEEeccCC-CHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK-GADAVLLIAAVL-PDL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~-GADaVLLiaaiL-~~~ 275 (407)
+..++++.+++.|...| |+.+-..+++.++.+++. +++||...+-+.+++++.++... .+|.|.+-.... +-.
T Consensus 204 ~a~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 278 (397)
T 2qde_A 204 QALTTIRALEKYNLSKI----EQPLPAWDLDGMARLRGK-VATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLL 278 (397)
T ss_dssp HHHHHHHHHGGGCCSCE----ECCSCTTCHHHHHHHHTT-CSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHH
T ss_pred HHHHHHHHHHhCCCCEE----ECCCChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHH
Confidence 44567787888887654 444556789999999986 89999999999999999887765 489999977655 345
Q ss_pred HHHHHHHHHHHcCCcEEEEe
Q 015424 276 DIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVEV 295 (407)
+...+.+.|+..|+.+++-+
T Consensus 279 ~~~~i~~~A~~~g~~~~~~~ 298 (397)
T 2qde_A 279 KAQRWLTLARLANLPVICGC 298 (397)
T ss_dssp HHHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHHHcCCeEEEec
Confidence 66788899999999987764
No 394
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=91.60 E-value=0.71 Score=45.22 Aligned_cols=120 Identities=16% Similarity=0.210 Sum_probs=83.4
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHH--cCCcEEEEEecCCcCCCCHHHHHHHHhcCCCC
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEK--GGAACLSILTDEKYFKGSFENLEAVRSAGVKC 240 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~--~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~l 240 (407)
...++++.. .....+....- .|+ . ..+..++++.+++ .| |..+ |+.+-..+++.+..+++. +++
T Consensus 174 ~v~avr~a~--g~~~~l~vDan-----~~~-~-~~~a~~~~~~l~~~~~~---i~~i-EqP~~~~d~~~~~~l~~~-~~i 239 (366)
T 1tkk_A 174 RIQEIRKRV--GSAVKLRLDAN-----QGW-R-PKEAVTAIRKMEDAGLG---IELV-EQPVHKDDLAGLKKVTDA-TDT 239 (366)
T ss_dssp HHHHHHHHH--CSSSEEEEECT-----TCS-C-HHHHHHHHHHHHHTTCC---EEEE-ECCSCTTCHHHHHHHHHH-CSS
T ss_pred HHHHHHHHh--CCCCeEEEECC-----CCC-C-HHHHHHHHHHHhhcCCC---ceEE-ECCCCcccHHHHHHHHhh-CCC
Confidence 344555542 12356766652 122 1 1244567788888 66 4344 444556789999999987 899
Q ss_pred cEEeccccCCHHHHHHHHHc-CCCEEEEeccCC-CHHHHHHHHHHHHHcCCcEEEEeC
Q 015424 241 PLLCKEFIVDAWQIYYARTK-GADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEVH 296 (407)
Q Consensus 241 PVL~KDFIid~~QI~eAr~~-GADaVLLiaaiL-~~~~L~~Li~~a~~LGL~aLVEVh 296 (407)
||...+-+.+++++.+.... .+|.|.+-.... +-.+...+.+.|+..|+.+++-+.
T Consensus 240 pIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~ 297 (366)
T 1tkk_A 240 PIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVGSM 297 (366)
T ss_dssp CEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECCS
T ss_pred CEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHHHHHHHHHcCCcEEecCc
Confidence 99999999999999887655 589999977655 445677888999999999877654
No 395
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=91.58 E-value=0.75 Score=45.26 Aligned_cols=120 Identities=13% Similarity=0.072 Sum_probs=87.6
Q ss_pred cHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCc
Q 015424 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP 241 (407)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lP 241 (407)
....++++.. ....+..+.- |-+.. .+ .++++.+++.|...| |+.+-..+++.+..+++. +++|
T Consensus 178 ~~v~avr~a~---~~~~l~vDan------~~~~~-~~-~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~ip 241 (375)
T 1r0m_A 178 QPVRATREAF---PDIRLTVDAN------SAYTL-AD-AGRLRQLDEYDLTYI----EQPLAWDDLVDHAELARR-IRTP 241 (375)
T ss_dssp HHHHHHHHHC---TTSCEEEECT------TCCCG-GG-HHHHHTTGGGCCSCE----ECCSCTTCSHHHHHHHHH-CSSC
T ss_pred HHHHHHHHHc---CCCeEEEeCC------CCCCH-HH-HHHHHHHHhCCCcEE----ECCCCcccHHHHHHHHHh-CCCC
Confidence 4556666643 2356777751 22232 25 778888888886554 344556788999999986 8999
Q ss_pred EEeccccCCHHHHHHHHHcC-CCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEEeCC
Q 015424 242 LLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEVHD 297 (407)
Q Consensus 242 VL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVEVht 297 (407)
|...+-+.+++++.+....| +|.|.+-..... -.+...+.+.|+..|+.+++-...
T Consensus 242 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 299 (375)
T 1r0m_A 242 LCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCGGML 299 (375)
T ss_dssp EEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred EEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 99999999999998887665 899999877763 456778899999999998775443
No 396
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=91.55 E-value=0.35 Score=44.94 Aligned_cols=171 Identities=11% Similarity=0.084 Sum_probs=95.3
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE----eccccCCHH-HHHHHHHcCCCEEEEeccCC
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL----CKEFIVDAW-QIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL----~KDFIid~~-QI~eAr~~GADaVLLiaaiL 272 (407)
+..++++.... .+.++=|-++ -|...+++-++.+++. .+.||+ .-|.--+-. ++..+..+ ||.|.+.+. .
T Consensus 12 ~al~l~~~l~~-~v~~~KvG~~-l~~~~G~~~v~~L~~~-~g~~VflDlK~~DIpnTv~~a~~~~~~~-ad~vTvh~~-~ 86 (215)
T 3ve9_A 12 IPEETLRKLNG-KVAGIKVGWP-LLLNLGKEKVKELVGL-VDGIKILDLKLADIDNTMILIVDELKDI-TNSFIAHAF-V 86 (215)
T ss_dssp CCHHHHHHHHT-TSSEEEEEHH-HHHHHCHHHHHHHHTT-CCSEEEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEGG-G
T ss_pred HHHHHHHHhCC-cCcEEEecHH-HHHhhCHHHHHHHHHh-cCCcEEEEecccCchhHHHHHHHHHHHh-hheEEEeCC-C
Confidence 34455555532 3455555443 2334457778888863 367887 356432222 34445677 999988553 3
Q ss_pred C-HHHHHHHHHHHHHcCCcEEEEeCCHH--------HHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHh
Q 015424 273 P-DLDIRYMTKICKLLGLTALVEVHDER--------EMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLL 343 (407)
Q Consensus 273 ~-~~~L~~Li~~a~~LGL~aLVEVht~e--------ElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~ 343 (407)
. .+-++.+ + ...|+.+|.+.++.. -++.+.+. |.+ |+--. .| ..+....+.
T Consensus 87 G~~~~~~~~-~--~~~~v~vLts~s~~~~~~~~v~~~a~~a~~~-G~~--GvV~s-----------at---~~~e~~~ir 146 (215)
T 3ve9_A 87 GVEGSLASL-S--QRVDLFLVLSMSHPGWNDAFYPYLREVARRV-NPK--GFVAP-----------AT---RPSMISRVK 146 (215)
T ss_dssp CTTTTHHHH-H--HHSEEEEECCCSSTTCCGGGHHHHHHHHHHH-CCS--EEECC-----------TT---SHHHHHHHH
T ss_pred CcHHHHHhH-h--cCCCEEEEEecCCcchHHHHHHHHHHHHHHc-CCC--ceeeC-----------CC---CHHHHHHHH
Confidence 3 3345444 2 233555555554421 22233343 432 22100 11 112223333
Q ss_pred hcccccccccCCceEEEeeCCCCHH--HHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 344 EGERGEIIRQKNIIVVGESGLFTPD--DIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 344 ~~~~~~~i~~~~v~vVAESGI~t~e--D~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
+. . + + .++.-+||. ++ +...+.++|+|-++||.+|++++||.++++++..
T Consensus 147 ~~-----~-~-~-f~~v~pGI~-~~g~~~~~a~~~Gad~iVvGr~I~~a~dp~~a~~~i~~ 198 (215)
T 3ve9_A 147 GD-----F-P-D-KLVISPGVG-TQGAKPGIALCHGADYEIVGRSVYQSADPVRKLEEIVR 198 (215)
T ss_dssp HH-----C-T-T-SEEEECCTT-STTCCTTHHHHTTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred Hh-----C-C-C-cEEEcCCCC-cCcCCHHHHHHcCCCEEEeCHHHcCCCCHHHHHHHHHH
Confidence 32 1 2 3 556678995 34 5767788999999999999999999999887753
No 397
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=91.54 E-value=0.34 Score=46.35 Aligned_cols=156 Identities=13% Similarity=0.145 Sum_probs=83.5
Q ss_pred CCCCHHHHHHHHhcCCCCcEE----eccccCCHH-HHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcC--------C
Q 015424 223 FKGSFENLEAVRSAGVKCPLL----CKEFIVDAW-QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLG--------L 289 (407)
Q Consensus 223 F~Gs~edL~~Vr~a~v~lPVL----~KDFIid~~-QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LG--------L 289 (407)
...+++-++.+|+. +.+|+ .-|..-+.. .+..+..+|||.|.+.+ ....+-++.+.+.+++.| +
T Consensus 64 ~~~G~~~v~~Lk~~--g~~VflDlK~~DIpnTv~~a~~~~~~~gaD~vTVh~-~~G~~~~~~a~~~~~~~g~~~~~li~V 140 (255)
T 3ldv_A 64 TLFGPDFVRELHKR--GFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHA-SGGERMMAASREILEPYGKERPLLIGV 140 (255)
T ss_dssp HHHHHHHHHHHHHT--TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEG-GGCHHHHHHHHHHHGGGGGGSCEEEEE
T ss_pred HhhCHHHHHHHHhc--CCCEEEEEecccchhHHHHHHHHHHhcCCCEEEEec-cCCHHHHHHHHHHHhhcCCCCceEEEE
Confidence 33456778888864 56777 345433333 34446778999998854 455667777887776543 3
Q ss_pred cEEEEeCCHHHHHHHhcccCCcE-----E---Ee--eccccccccccccccccccCchhHHHHhhcccccccccCCceEE
Q 015424 290 TALVEVHDEREMDRVLGIEGIEL-----I---GI--NNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVV 359 (407)
Q Consensus 290 ~aLVEVht~eElerAl~l~Ga~i-----I---GI--NnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vV 359 (407)
.+|.+.. .+++. ++ |..- + .- ....+ .-+-........+.+. .+.+. ++
T Consensus 141 tvLTS~s-~~~l~---~~-g~~~~~~~~V~~~A~~a~~aG~---------~GvV~sa~e~~~iR~~------~g~~f-l~ 199 (255)
T 3ldv_A 141 TVLTSME-SADLQ---GI-GILSAPQDHVLRLATLTKNAGL---------DGVVCSAQEASLLKQH------LGREF-KL 199 (255)
T ss_dssp CSCTTCC-HHHHH---HT-TCCSCHHHHHHHHHHHHHHTTC---------SEEECCHHHHHHHHHH------HCTTS-EE
T ss_pred EEEecCC-HHHHH---hc-CCCCCHHHHHHHHHHHHHHcCC---------CEEEECHHHHHHHHHh------cCCCc-EE
Confidence 3333222 22332 11 1100 0 00 00000 1111221222333222 12343 33
Q ss_pred EeeCCCCHH-H---------HHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 360 GESGLFTPD-D---------IAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 360 AESGI~t~e-D---------~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
.--||.-.. + ...+.++|+|-++||.+|++++||.++++++..
T Consensus 200 VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~ 252 (255)
T 3ldv_A 200 VTPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQAAHPEVVLEEINS 252 (255)
T ss_dssp EEECCCCTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHH
T ss_pred EeCCcccCcCCccceeccCCHHHHHHcCCCEEEECHHHhCCCCHHHHHHHHHH
Confidence 445664211 1 345678999999999999999999999988754
No 398
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=91.54 E-value=0.26 Score=48.93 Aligned_cols=91 Identities=10% Similarity=0.079 Sum_probs=71.8
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCCCHHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPDLD 276 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~~~ 276 (407)
+..++++.+++.|...| |+.+-..+++.++.+++. +++||..-+-+.++.++.++...| +|.|.+-...=+-.+
T Consensus 223 ~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~GGit~ 297 (388)
T 2nql_A 223 RALELIAEMQPFDPWFA----EAPVWTEDIAGLEKVSKN-TDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGHKGITN 297 (388)
T ss_dssp HHHHHHHHHGGGCCSCE----ECCSCTTCHHHHHHHHTS-CCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHHHCHHH
T ss_pred HHHHHHHHHhhcCCCEE----ECCCChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCCCCHHH
Confidence 45677888888887765 445556789999999986 899999999999999999987765 899888665512245
Q ss_pred HHHHHHHHHHcCCcEEE
Q 015424 277 IRYMTKICKLLGLTALV 293 (407)
Q Consensus 277 L~~Li~~a~~LGL~aLV 293 (407)
..++.+.|+..|+.+++
T Consensus 298 ~~~i~~~A~~~g~~~~~ 314 (388)
T 2nql_A 298 FIRIGALAAEHGIDVIP 314 (388)
T ss_dssp HHHHHHHHHHHTCEECC
T ss_pred HHHHHHHHHHcCCeEEe
Confidence 67788899999999876
No 399
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=91.53 E-value=4.5 Score=38.55 Aligned_cols=160 Identities=14% Similarity=0.081 Sum_probs=94.2
Q ss_pred HHHHHHHHcCCcEEEEE-ecCCcCCCCH-HHHHHHHhcCC-CCcEEeccccCCHHH----HHHHHHcCCCEEEEeccCC-
Q 015424 201 EIARSYEKGGAACLSIL-TDEKYFKGSF-ENLEAVRSAGV-KCPLLCKEFIVDAWQ----IYYARTKGADAVLLIAAVL- 272 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVL-Td~~~F~Gs~-edL~~Vr~a~v-~lPVL~KDFIid~~Q----I~eAr~~GADaVLLiaaiL- 272 (407)
++++.+.+. +++|-|+ |-..++.=|. |..+.++.. + ++||+..=.-.+..+ ...|..+|||++++..-..
T Consensus 23 ~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~-~~rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 100 (283)
T 2pcq_A 23 ELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRAL-RPRKPFLVGLMEETLPQAEGALLEAKAAGAMALLATPPRYY 100 (283)
T ss_dssp HHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTC-CCSSCCEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCTT
T ss_pred HHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHH-HhCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEecCCcCC
Confidence 445556677 8888876 2222222244 444444443 4 689996544444432 3446788999999988754
Q ss_pred ---CHHHHHHHHHHHHHcCCcEEEE-e-------CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHH
Q 015424 273 ---PDLDIRYMTKICKLLGLTALVE-V-------HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKK 341 (407)
Q Consensus 273 ---~~~~L~~Li~~a~~LGL~aLVE-V-------ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~ 341 (407)
+++.+...++...+ ++.+++= + =+.+.+.+..+. ..++|| ++-.-|+....+
T Consensus 101 ~~~~~~~l~~~f~~va~-~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgi--------------Kdssgd~~~~~~ 163 (283)
T 2pcq_A 101 HGSLGAGLLRYYEALAE-KMPLFLYHVPQNTKVDLPLEAVEALAPH--PNVLGI--------------KDSSGDLSRIAF 163 (283)
T ss_dssp GGGTTTHHHHHHHHHHH-HSCEEEEECHHHHCCCCCHHHHHHHTTS--TTEEEE--------------EECSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHHhc-CCCEEEEeCccccCcCCCHHHHHHHhcC--CCEEEE--------------EECCCCHHHHHH
Confidence 44555554444334 7766542 1 145566665554 579999 444457777777
Q ss_pred HhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 342 LLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 342 L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
++. . +++..+ -+|-. +.+.....+|++|++-|.+=+-+
T Consensus 164 ~~~-~------~~~f~v--~~G~d--~~~~~~l~~G~~G~is~~~n~~P 201 (283)
T 2pcq_A 164 YQA-R------LQEFRV--YTGHA--PTFLGALALGAEGGILAAANLAP 201 (283)
T ss_dssp HHH-H------CSSCEE--EECCG--GGHHHHHHTTCCEEECGGGGTCH
T ss_pred HHh-c------CCCEEE--EECcH--HHHHHHHHcCCCEEEeCHHHhCH
Confidence 765 2 234334 34432 23455668999999988776543
No 400
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=91.49 E-value=0.43 Score=46.36 Aligned_cols=87 Identities=21% Similarity=0.190 Sum_probs=64.1
Q ss_pred CC-HHHHHHHHhcCCC-CcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHH
Q 015424 225 GS-FENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DER 299 (407)
Q Consensus 225 Gs-~edL~~Vr~a~v~-lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~e 299 (407)
|+ ..-++.+|+.... .+|.. + +-+..|+.+|..+|||.|+|.. ++.+++++.++..+..+-.+.+|+. |++
T Consensus 177 G~i~~av~~ar~~~~~~~~I~V-E-V~tleea~eA~~aGaD~I~LDn--~~~e~l~~av~~l~~~~~~v~ieASGGIt~e 252 (285)
T 1o4u_A 177 GSAERAVQEVRKIIPFTTKIEV-E-VENLEDALRAVEAGADIVMLDN--LSPEEVKDISRRIKDINPNVIVEVSGGITEE 252 (285)
T ss_dssp SSHHHHHHHHHTTSCTTSCEEE-E-ESSHHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHHHHHCTTSEEEEEECCCTT
T ss_pred CCHHHHHHHHHHhCCCCceEEE-E-eCCHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhhccCCCceEEEECCCCHH
Confidence 44 4567777764212 45554 2 2357899999999999999987 7888898888887765445678877 788
Q ss_pred HHHHHhcccCCcEEEee
Q 015424 300 EMDRVLGIEGIELIGIN 316 (407)
Q Consensus 300 ElerAl~l~Ga~iIGIN 316 (407)
.+....+. |+++|++-
T Consensus 253 ni~~~a~t-GVD~IsvG 268 (285)
T 1o4u_A 253 NVSLYDFE-TVDVISSS 268 (285)
T ss_dssp TGGGGCCT-TCCEEEEG
T ss_pred HHHHHHHc-CCCEEEEe
Confidence 88777786 99999984
No 401
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=91.48 E-value=0.36 Score=48.03 Aligned_cols=84 Identities=14% Similarity=0.187 Sum_probs=55.3
Q ss_pred HHHHHHHHhcCCCCcEE--eccccCCHHHHHHHHHcCCCEEEEeccCC--C-H-HHHHHHHHHHHHcCCcEEEEeCCHHH
Q 015424 227 FENLEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVL--P-D-LDIRYMTKICKLLGLTALVEVHDERE 300 (407)
Q Consensus 227 ~edL~~Vr~a~v~lPVL--~KDFIid~~QI~eAr~~GADaVLLiaaiL--~-~-~~L~~Li~~a~~LGL~aLVEVht~eE 300 (407)
++.|+.+++. +++||+ +-..|.++.++.+...+|||+|+++.+++ + + ...+.|.+..+. ..|.+-
T Consensus 229 lell~~i~~~-~~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~~--------~~~~~~ 299 (330)
T 2yzr_A 229 YEVLLEVKKL-GRLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYN--------YDKPDI 299 (330)
T ss_dssp HHHHHHHHHH-TSCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHT--------TTCHHH
T ss_pred HHHHHHHHHh-CCCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHHh--------cCCHHH
Confidence 3777788876 789995 67777789999999999999999999987 2 2 234555554432 345555
Q ss_pred HHHHh-cccCCcEEEeecccc
Q 015424 301 MDRVL-GIEGIELIGINNRNL 320 (407)
Q Consensus 301 lerAl-~l~Ga~iIGINnRdL 320 (407)
+..+- .+ |-.+.|+|...+
T Consensus 300 ~~~~s~~~-~~~m~g~~~~~~ 319 (330)
T 2yzr_A 300 VAEVSKNL-GEAMKGIDITQI 319 (330)
T ss_dssp HHHHHTTC-CCCCCC------
T ss_pred HHHHHhcc-cccCcCcccccc
Confidence 54443 34 667899987665
No 402
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=91.43 E-value=2.7 Score=35.60 Aligned_cols=96 Identities=16% Similarity=0.118 Sum_probs=62.7
Q ss_pred HHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccC-chhHHHHhhcccccccccCCceE
Q 015424 280 MTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVD-NSNTKKLLEGERGEIIRQKNIIV 358 (407)
Q Consensus 280 Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vD-l~~t~~L~~~~~~~~i~~~~v~v 358 (407)
+....+.+|..+..++.|-+|+...+.-..+++|=. |+ .=...| ++.+.+|... .. ..++++
T Consensus 28 l~~~L~~~G~~~v~~a~~g~~al~~~~~~~~Dlill---D~---------~MP~mdG~el~~~ir~~---~~--~~~ipv 90 (134)
T 3to5_A 28 VKNLLRDLGFNNTQEADDGLTALPMLKKGDFDFVVT---DW---------NMPGMQGIDLLKNIRAD---EE--LKHLPV 90 (134)
T ss_dssp HHHHHHHTTCCCEEEESSHHHHHHHHHHHCCSEEEE---ES---------CCSSSCHHHHHHHHHHS---TT--TTTCCE
T ss_pred HHHHHHHcCCcEEEEECCHHHHHHHHHhCCCCEEEE---cC---------CCCCCCHHHHHHHHHhC---CC--CCCCeE
Confidence 444566789988888999988877666445666554 22 111112 2333344321 11 146789
Q ss_pred EEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHH
Q 015424 359 VGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGI 397 (407)
Q Consensus 359 VAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i 397 (407)
|.-+|-.+.++..++.++|++++| .|+-++....
T Consensus 91 I~lTa~~~~~~~~~~~~~Ga~~yl-----~KP~~~~~L~ 124 (134)
T 3to5_A 91 LMITAEAKREQIIEAAQAGVNGYI-----VKPFTAATLK 124 (134)
T ss_dssp EEEESSCCHHHHHHHHHTTCCEEE-----ESSCCHHHHH
T ss_pred EEEECCCCHHHHHHHHHCCCCEEE-----ECCCCHHHHH
Confidence 999999999999999999999985 4666665443
No 403
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=91.39 E-value=2 Score=40.87 Aligned_cols=167 Identities=14% Similarity=0.091 Sum_probs=97.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEEe--cCCcCC---CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEecc-
Q 015424 197 FDPVEIARSYEKGGAACLSILT--DEKYFK---GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA- 270 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLT--d~~~F~---Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa- 270 (407)
.+..++++.+.+.|...|=+-+ .++|.. +..+.++.+++. .++|+..- .-....+..|..+|+|.|.+..+
T Consensus 26 e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l--~~n~~~i~~a~~~G~~~V~i~~~~ 102 (295)
T 1ydn_A 26 ADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVL--VPNMKGYEAAAAAHADEIAVFISA 102 (295)
T ss_dssp HHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEE--CSSHHHHHHHHHTTCSEEEEEEES
T ss_pred HHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEE--eCCHHHHHHHHHCCCCEEEEEEec
Confidence 3566778899999998887743 133322 233444444332 24554211 13467788899999999988732
Q ss_pred ---------CCCH----HHHHHHHHHHHHcCCcEEEEe-----------CCHHHHHHHh----cccCCcEEEeecccccc
Q 015424 271 ---------VLPD----LDIRYMTKICKLLGLTALVEV-----------HDEREMDRVL----GIEGIELIGINNRNLAI 322 (407)
Q Consensus 271 ---------iL~~----~~L~~Li~~a~~LGL~aLVEV-----------ht~eElerAl----~l~Ga~iIGINnRdL~~ 322 (407)
-.+. +.+.+.+++|++.|+.+-.++ ++.+++.+.. ++ |++.|.+- |-
T Consensus 103 S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~-G~d~i~l~--Dt-- 177 (295)
T 1ydn_A 103 SEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSL-GCHEVSLG--DT-- 177 (295)
T ss_dssp CHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHH-TCSEEEEE--ET--
T ss_pred CHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhc-CCCEEEec--CC--
Confidence 2222 334566889999999975332 4677765555 45 99988886 22
Q ss_pred ccccccccccccCchhHHHHhhcccccccccCCceEEE----eeCCCCHHHHHHHHHcCCCEEEE
Q 015424 323 SIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVG----ESGLFTPDDIAYVQEAGVKAVLV 383 (407)
Q Consensus 323 ~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVA----ESGI~t~eD~~~l~~~GadaVLV 383 (407)
.|. ..++...++++.++.. + + ++++.. -+|+ ..++.....++|++-|=+
T Consensus 178 ~G~--------~~P~~~~~lv~~l~~~-~-~-~~~l~~H~Hn~~Gl-a~an~l~Ai~aG~~~vd~ 230 (295)
T 1ydn_A 178 IGR--------GTPDTVAAMLDAVLAI-A-P-AHSLAGHYHDTGGR-ALDNIRVSLEKGLRVFDA 230 (295)
T ss_dssp TSC--------CCHHHHHHHHHHHHTT-S-C-GGGEEEEEBCTTSC-HHHHHHHHHHHTCCEEEE
T ss_pred CCC--------cCHHHHHHHHHHHHHh-C-C-CCeEEEEECCCcch-HHHHHHHHHHhCCCEEEe
Confidence 111 2333444544443221 1 1 222322 2566 445677778899987654
No 404
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=91.39 E-value=0.6 Score=45.92 Aligned_cols=92 Identities=14% Similarity=0.137 Sum_probs=70.5
Q ss_pred CHHHHHHHH-HHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCC-CH
Q 015424 198 DPVEIARSY-EKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PD 274 (407)
Q Consensus 198 dp~~iA~ay-~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL-~~ 274 (407)
+..++++.+ ++.|. -+-+| +. +++.++.+|+. +++||...+-+.++.++.++...| +|.|.+-.... +-
T Consensus 205 ~a~~~~~~l~~~~~i----~iE~P-~~--~~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 276 (371)
T 2ps2_A 205 TALRLLRLLPHGLDF----ALEAP-CA--TWRECISLRRK-TDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGL 276 (371)
T ss_dssp HHHHHHHHSCTTCCC----EEECC-BS--SHHHHHHHHTT-CCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSH
T ss_pred HHHHHHHHHHhhcCC----cCcCC-cC--CHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCH
Confidence 344566666 66664 33444 33 89999999986 899999999999999998886665 89999977665 44
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCC
Q 015424 275 LDIRYMTKICKLLGLTALVEVHD 297 (407)
Q Consensus 275 ~~L~~Li~~a~~LGL~aLVEVht 297 (407)
.+..++.+.|+..|+.+++-+..
T Consensus 277 t~~~~i~~~A~~~g~~~~~~~~~ 299 (371)
T 2ps2_A 277 TRGRRQRDICLAAGYSVSVQETC 299 (371)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSS
T ss_pred HHHHHHHHHHHHcCCeEEecCCC
Confidence 56778889999999999887543
No 405
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=91.38 E-value=2.4 Score=41.61 Aligned_cols=138 Identities=14% Similarity=0.174 Sum_probs=100.5
Q ss_pred CCCcEE-eccccCCHHHHHHHHHcCCCEEEEeccCCCHH----HHHHHHHHHHHcCCcEEEE------------------
Q 015424 238 VKCPLL-CKEFIVDAWQIYYARTKGADAVLLIAAVLPDL----DIRYMTKICKLLGLTALVE------------------ 294 (407)
Q Consensus 238 v~lPVL-~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~----~L~~Li~~a~~LGL~aLVE------------------ 294 (407)
.++||. .-|-.-+...+.+|..+|-+.|.++.+-++-+ ..++++++||..|+.+=.|
T Consensus 71 ~~VPValHlDHg~~~e~~~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~ 150 (305)
T 1rvg_A 71 ARVPVAVHLDHGSSYESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDA 150 (305)
T ss_dssp CSSCEEEEEEEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCT
T ss_pred CCCcEEEECCCCCCHHHHHHHHHcCCCeeeeCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCcccccccc
Confidence 478874 56666677899999999999999999999753 3567889999887665211
Q ss_pred -eCCHHHHHHHhcccCCcEEEeeccccccccccccc-cccccCchhHHHHhhcccccccccCCceEEE--ee--------
Q 015424 295 -VHDEREMDRVLGIEGIELIGINNRNLAISIFSYRT-ETFEVDNSNTKKLLEGERGEIIRQKNIIVVG--ES-------- 362 (407)
Q Consensus 295 -Vht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~-~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVA--ES-------- 362 (407)
..|++|+.+..+..|+|.+.+.-=+- || .|.. .+...|++...++.+.+ ++++|. .|
T Consensus 151 ~yT~Peea~~Fv~~TgvD~LAvaiGt~--HG-~Yk~~g~p~L~~~~L~~I~~~~--------~vpLVlHGgSsv~~~~~~ 219 (305)
T 1rvg_A 151 LLTNPEEARIFMERTGADYLAVAIGTS--HG-AYKGKGRPFIDHARLERIARLV--------PAPLVLHGASAVPPELVE 219 (305)
T ss_dssp TCCCHHHHHHHHHHHCCSEEEECSSCC--SS-SBCSSSSCCCCHHHHHHHHHHC--------CSCEEECSCCCCCHHHHH
T ss_pred ccCCHHHHHHHHHHHCCCEEEEecCcc--cc-ccCCCCCCccCHHHHHHHHHhc--------CCCEEEeCCCCCcHHHHH
Confidence 15678887777544999988863333 21 1321 45678888888887652 244544 45
Q ss_pred -------------CCCCHHHHHHHHHcCCCEEEEcccc
Q 015424 363 -------------GLFTPDDIAYVQEAGVKAVLVGESI 387 (407)
Q Consensus 363 -------------GI~t~eD~~~l~~~GadaVLVGeaL 387 (407)
|+ ..++++++.++|+.-|=|++.+
T Consensus 220 ~~~~~gg~~~~~~G~-p~e~i~~ai~~GV~KiNi~Tdl 256 (305)
T 1rvg_A 220 RFRASGGEIGEAAGI-HPEDIKKAISLGIAKINTDTDL 256 (305)
T ss_dssp HHHHTTCCCCSCBCC-CHHHHHHHHHTTEEEEEECHHH
T ss_pred HHHhhccccccCCCC-CHHHHHHHHHCCCeEEEEChHH
Confidence 76 7889999999999999998876
No 406
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=91.35 E-value=1.1 Score=44.27 Aligned_cols=119 Identities=9% Similarity=0.071 Sum_probs=86.8
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....+.++.- |-+. ..+..++++.+++.| +..+-+ .+-..+++.+..+|+. +++||
T Consensus 177 ~v~avR~~~--g~~~~l~vDan------~~~~-~~~a~~~~~~l~~~~---i~~iEq-P~~~~~~~~~~~l~~~-~~iPi 242 (370)
T 1chr_A 177 HMEALSNSL--GSKAYLRVDVN------QAWD-EQVASVYIPELEALG---VELIEQ-PVGRENTQALRRLSDN-NRVAI 242 (370)
T ss_dssp HHHHHHHHS--STTCCEEEECT------TCCC-TTHHHHHTHHHHTTT---EEEEEC-CSCTTCHHHHHHHHHH-SCSEE
T ss_pred HHHHHHHhc--CCCCEEEEECC------CCCC-HHHHHHHHHHHHhcC---CCEEEC-CCCcccHHHHHHHHhh-CCCCE
Confidence 345666543 12356777642 2222 235667888999887 444444 4566788999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEEe
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVEV 295 (407)
...+-+.+++++.+....| +|.|.+...... -.+...+.+.|+.+|+.+++-+
T Consensus 243 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (370)
T 1chr_A 243 MADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGT 297 (370)
T ss_dssp EESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEECC
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 9999999999998887764 899999888774 4567888999999999987543
No 407
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=91.23 E-value=0.49 Score=47.13 Aligned_cols=117 Identities=15% Similarity=0.143 Sum_probs=84.1
Q ss_pred HHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE
Q 015424 164 IGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL 243 (407)
Q Consensus 164 ~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL 243 (407)
..++++.. .....|..++- .| +. ..+..++++.+++.|...| |+.+-..+++.++.+++. +++||.
T Consensus 205 v~avR~a~--G~d~~l~vDan-----~~-~~-~~~a~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~iPIa 270 (407)
T 2o56_A 205 MAAIRDAV--GPDVDIIAEMH-----AF-TD-TTSAIQFGRMIEELGIFYY----EEPVMPLNPAQMKQVADK-VNIPLA 270 (407)
T ss_dssp HHHHHHHH--CTTSEEEEECT-----TC-SC-HHHHHHHHHHHGGGCCSCE----ECSSCSSSHHHHHHHHHH-CCSCEE
T ss_pred HHHHHHhc--CCCCEEEEECC-----CC-CC-HHHHHHHHHHHHhcCCCEE----eCCCChhhHHHHHHHHHh-CCCCEE
Confidence 44555532 12466777652 12 21 1245567788888886654 344556789999999987 899999
Q ss_pred eccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEE
Q 015424 244 CKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVE 294 (407)
Q Consensus 244 ~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVE 294 (407)
..+-+.+++++.+....| +|.|.+....... .+..++.+.|+..|+.+++-
T Consensus 271 ~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h 323 (407)
T 2o56_A 271 AGERIYWRWGYRPFLENGSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIH 323 (407)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCC
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeec
Confidence 999999999998887766 8999888777644 46778889999999998763
No 408
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=91.21 E-value=0.53 Score=45.69 Aligned_cols=193 Identities=16% Similarity=0.099 Sum_probs=106.7
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCc---EEEEEecCCcCCCCHHHHHHHHhc--CCCCcEEeccc---
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAA---CLSILTDEKYFKGSFENLEAVRSA--GVKCPLLCKEF--- 247 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~---aISVLTd~~~F~Gs~edL~~Vr~a--~v~lPVL~KDF--- 247 (407)
++-|++..|=. .+. ....++++.+...-.. .+-|+.-|. +-+|..+++. +.++.|=..|.
T Consensus 27 k~~i~gNWKMn-~~~------~~~~~l~~~l~~~~~~~~~~vevvv~Pp-----~~~L~~v~~~~~~~~i~vgAQn~~~~ 94 (275)
T 3kxq_A 27 RPFIAGNWKMN-GTG------ESLGELRAIAAGISSDLGRLFEALICVP-----ATLLSRAFDILGGENILLGGQNCHFD 94 (275)
T ss_dssp CCEEEEECCBC-CCG------GGHHHHHHHHHHHC----CCSEEEEECC-----TTTHHHHHHHHTTSSSEEEESCCCSS
T ss_pred CCEEEEEhhhC-cCH------HHHHHHHHHHHhhcccccCCceEEEeCC-----HHHHHHHHHHhcCCCceEEecccccc
Confidence 45677777753 221 2456677766543211 233443344 5567777643 13566666551
Q ss_pred -------cCCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeCC-HHH-------------
Q 015424 248 -------IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVHD-ERE------------- 300 (407)
Q Consensus 248 -------Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVht-~eE------------- 300 (407)
=+.+.++ +++||+.|+|+.+ .+ +++.+..=++.|.+.||.++++|-. ++|
T Consensus 95 ~~GAfTGEIS~~mL---kd~G~~~VIiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pIlCVGEtleeRe~g~t~~vv~~Q 171 (275)
T 3kxq_A 95 DYGPYTGDISAFML---KEAGASHVIIGHSERRTVYQESDAIVRAKVQAAWRAGLVALICVGETLEERKSNKVLDVLTRQ 171 (275)
T ss_dssp SSBSCTTCCCHHHH---HHHTCSEEEESCHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHH
T ss_pred cCCCccCcCCHHHH---HHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHCCCHHHHHHHH
Confidence 1555565 4569999999998 33 4555555568888999999999974 332
Q ss_pred HHHHhcccCCc----EEEeeccccccccccccccccccCchhHHHHhhccccc---cc--ccCCceEEEeeCCCCHHHHH
Q 015424 301 MDRVLGIEGIE----LIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGE---II--RQKNIIVVGESGLFTPDDIA 371 (407)
Q Consensus 301 lerAl~l~Ga~----iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~---~i--~~~~v~vVAESGI~t~eD~~ 371 (407)
++.++.. +++ +|....-=-||||..- ..+...+.-..+|.- .. ....+.++-.|.+ +++.+.
T Consensus 172 l~~~l~~-~~~~~~vVIAYEPVWAIGTGktA-------t~e~aqevh~~IR~~l~~~~~~~a~~~rIlYGGSV-~~~Na~ 242 (275)
T 3kxq_A 172 LEGSLPD-GATAENIIIAYEPVWAVGTGNTA-------TSADVAEVHAFIHHKMHSRFGDEGAKIRLLYGGSV-KPSNAF 242 (275)
T ss_dssp HHHHSCT-TCCTTTEEEEECCCC---------------CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEECSCC-CTTTHH
T ss_pred HHHHHcC-CcccCCEEEEECChhhhcCCCCC-------CHHHHHHHHHHHHHHHHHhhhhhcccceEEEcCCc-CHhHHH
Confidence 4444432 222 5555443333332211 222222222221110 00 0134566666666 888888
Q ss_pred HHHHc-CCCEEEEcccccCCCC
Q 015424 372 YVQEA-GVKAVLVGESIVKQDD 392 (407)
Q Consensus 372 ~l~~~-GadaVLVGeaLmk~~d 392 (407)
.++.. .+||+|||.+=.++++
T Consensus 243 el~~~~dIDG~LVGgASL~~~~ 264 (275)
T 3kxq_A 243 ELLSTAHVNGALIGGASLKAID 264 (275)
T ss_dssp HHHTSTTCCEEEESGGGSSHHH
T ss_pred HHHcCCccceEEeehhhcCHHH
Confidence 88765 8999999999887544
No 409
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=91.16 E-value=0.55 Score=46.36 Aligned_cols=119 Identities=13% Similarity=0.094 Sum_probs=83.8
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++... ....|..+. -.|+ . ..+..++++.+++.|...| |+..-..+++.+..+|+. +++||
T Consensus 174 ~v~avR~a~g--~~~~l~vDa-----n~~~-~-~~~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 239 (367)
T 3dg3_A 174 VVRALRERFG--DAIELYVDG-----NRGW-S-AAESLRAMREMADLDLLFA----EELCPADDVLSRRRLVGQ-LDMPF 239 (367)
T ss_dssp HHHHHHHHHG--GGSEEEEEC-----TTCS-C-HHHHHHHHHHTTTSCCSCE----ESCSCTTSHHHHHHHHHH-CSSCE
T ss_pred HHHHHHHHhC--CCCEEEEEC-----CCCC-C-HHHHHHHHHHHHHhCCCEE----ECCCCcccHHHHHHHHHh-CCCCE
Confidence 3455665431 234566664 1222 1 1244556777787775544 344556789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEe
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEV 295 (407)
...+-+.+++++.++...| +|.|.+......-.+...+...|+..|+.+++-.
T Consensus 240 a~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~Git~~~~ia~~A~~~gi~~~~~~ 293 (367)
T 3dg3_A 240 IADESVPTPADVTREVLGGSATAISIKTARTGFTGSTRVHHLAEGLGLDMVMGN 293 (367)
T ss_dssp EECTTCSSHHHHHHHHHHTSCSEEEECHHHHTTHHHHHHHHHHHHHTCEEEECC
T ss_pred EecCCcCCHHHHHHHHHcCCCCEEEeehhhhhHHHHHHHHHHHHHcCCeEEECC
Confidence 9999999999998887665 8999997665454567788999999999988753
No 410
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=91.15 E-value=0.8 Score=45.36 Aligned_cols=118 Identities=14% Similarity=0.184 Sum_probs=87.2
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++... ....+.++.- |-+. ..+..++++.+++.|...| |+..-.++++.+..+|+. +++||
T Consensus 180 ~v~avR~~~g--~~~~l~vDan------~~~~-~~~A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~ipI 245 (377)
T 3my9_A 180 ILETMRGEFG--ERIDLRLDFN------QALT-PFGAMKILRDVDAFRPTFI----EQPVPRRHLDAMAGFAAA-LDTPI 245 (377)
T ss_dssp HHHHHHHHHG--GGSEEEEECT------TCCC-TTTHHHHHHHHHTTCCSCE----ECCSCTTCHHHHHHHHHH-CSSCE
T ss_pred HHHHHHHHhC--CCCeEEEeCC------CCcC-HHHHHHHHHHHhhcCCCEE----ECCCCccCHHHHHHHHHh-CCCCE
Confidence 4556665431 2356777742 2223 3477889999999886655 445666789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHc-CCCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEE
Q 015424 243 LCKEFIVDAWQIYYARTK-GADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVE 294 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~-GADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVE 294 (407)
...+-+.+++++.++... ++|.|.+...... -.+...+.+.|+.+|+.+++-
T Consensus 246 a~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~ 299 (377)
T 3my9_A 246 LADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGG 299 (377)
T ss_dssp EESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEECC
T ss_pred EECCccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEecC
Confidence 999999999999887665 5899888776653 456778889999999998753
No 411
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=91.11 E-value=0.53 Score=47.07 Aligned_cols=121 Identities=8% Similarity=0.047 Sum_probs=87.8
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....|..+. . |-+.+..+..++++.+++.|...| |+.+-..+++.+..+|+. +++||
T Consensus 194 ~v~avR~a~--G~d~~l~vDa-----N-~~~~~~~~A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPI 260 (394)
T 3mkc_A 194 YLRELRGIL--GHDTDMMVDY-----L-YRFTDWYEVARLLNSIEDLELYFA----EATLQHDDLSGHAKLVEN-TRSRI 260 (394)
T ss_dssp HHHHHHHHH--CSSSEEEEEC-----T-TCCCCHHHHHHHHHHTGGGCCSEE----ESCSCTTCHHHHHHHHHH-CSSCB
T ss_pred HHHHHHHHh--CCCCeEEEeC-----C-CCCCCHHHHHHHHHHhhhcCCeEE----ECCCCchhHHHHHHHHhh-CCCCE
Confidence 455666543 1235676654 1 212112245677888888887665 455666789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEEeCCH
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHDE 298 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVEVht~ 298 (407)
...+-+.+++++.++...| +|.|.+....... .+...+...|+.+|+.++ +|+.
T Consensus 261 a~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~--~h~~ 316 (394)
T 3mkc_A 261 CGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELRRITEMATANNVQVM--PHNW 316 (394)
T ss_dssp EECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEC--CCCC
T ss_pred EeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEe--ecCC
Confidence 9999999999998887765 8999998888754 567788899999999986 5664
No 412
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=90.92 E-value=0.64 Score=46.59 Aligned_cols=72 Identities=21% Similarity=0.133 Sum_probs=52.2
Q ss_pred HHHHHHHHcCCcEEEEEecC---------------CcC-CC---CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC
Q 015424 201 EIARSYEKGGAACLSILTDE---------------KYF-KG---SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG 261 (407)
Q Consensus 201 ~iA~ay~~~GA~aISVLTd~---------------~~F-~G---s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G 261 (407)
+.|+...+.||++|.|-.-. .+| .+ ..+-|..++....++||+.-..|.+..++..|.++|
T Consensus 221 e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~Dv~KaLalG 300 (365)
T 3sr7_A 221 KTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLG 300 (365)
T ss_dssp HHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHHHHHHHHHcC
Confidence 67888899999999873110 011 11 124455555432379999999999999999999999
Q ss_pred CCEEEEeccCC
Q 015424 262 ADAVLLIAAVL 272 (407)
Q Consensus 262 ADaVLLiaaiL 272 (407)
||+|.+...+|
T Consensus 301 AdaV~ig~~~l 311 (365)
T 3sr7_A 301 AKAVGLSRTML 311 (365)
T ss_dssp CSEEEESHHHH
T ss_pred CCEEEECHHHH
Confidence 99999987655
No 413
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=90.88 E-value=0.56 Score=46.73 Aligned_cols=118 Identities=14% Similarity=0.111 Sum_probs=82.6
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....|..+.- .| +. ..+..++++.+++.|. ..+-+| +-..+++.++.+|+. +++||
T Consensus 207 ~v~avR~a~--G~d~~l~vDan-----~~-~~-~~~ai~~~~~l~~~~i---~~iE~P-~~~~~~~~~~~l~~~-~~iPI 272 (410)
T 2gl5_A 207 RIAAMREAM--GDDADIIVEIH-----SL-LG-TNSAIQFAKAIEKYRI---FLYEEP-IHPLNSDNMQKVSRS-TTIPI 272 (410)
T ss_dssp HHHHHHHHH--CSSSEEEEECT-----TC-SC-HHHHHHHHHHHGGGCE---EEEECS-SCSSCHHHHHHHHHH-CSSCE
T ss_pred HHHHHHHhc--CCCCEEEEECC-----CC-CC-HHHHHHHHHHHHhcCC---CeEECC-CChhhHHHHHHHHhh-CCCCE
Confidence 344555532 12456776652 12 11 1244566777777764 334444 455789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEE
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVE 294 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVE 294 (407)
...+-+.+++++.++...| +|.|.+....... .+..++.+.|+..|+.+++-
T Consensus 273 a~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h 326 (410)
T 2gl5_A 273 ATGERSYTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVH 326 (410)
T ss_dssp EECTTCCTTHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCC
T ss_pred EecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeec
Confidence 9999999999999887776 7999887776644 46678889999999998763
No 414
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=90.87 E-value=0.21 Score=49.56 Aligned_cols=78 Identities=13% Similarity=0.069 Sum_probs=62.0
Q ss_pred CHHHHHHHHHHcCCcEEEEEecC------CcCCC-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEec
Q 015424 198 DPVEIARSYEKGGAACLSILTDE------KYFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIA 269 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~------~~F~G-s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLia 269 (407)
+..++|+.+++. ++.|+|-.-. ..+.| ..+.+..+|+. +++||+.-..|.++.+..++...| ||.|.+.-
T Consensus 231 ~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR 308 (343)
T 3kru_A 231 MMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKR-CNIKTSAVGLITTQELAEEILSNERADLVALGR 308 (343)
T ss_dssp HHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-HTCEEEEESSCCCHHHHHHHHHTTSCSEEEESH
T ss_pred HHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHh-cCcccceeeeeeHHHHHHHHHhchhhHHHHHHH
Confidence 567789999999 9999995211 11233 46778889987 899999999999999999999998 99999988
Q ss_pred cCCCHHHH
Q 015424 270 AVLPDLDI 277 (407)
Q Consensus 270 aiL~~~~L 277 (407)
.+|.+.+|
T Consensus 309 ~~lanPdl 316 (343)
T 3kru_A 309 ELLRNPYW 316 (343)
T ss_dssp HHHHCTTH
T ss_pred HHhcCCeE
Confidence 88766555
No 415
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=90.86 E-value=0.64 Score=45.65 Aligned_cols=121 Identities=15% Similarity=0.137 Sum_probs=84.8
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....+..+.- .|+ . ..+..++++.+++.| +..+-+ .+-.++++.+..+|+. +++||
T Consensus 172 ~v~avR~a~--g~~~~l~vDan-----~~~-~-~~~a~~~~~~L~~~~---i~~iEq-P~~~~d~~~~~~l~~~-~~iPI 237 (354)
T 3jva_A 172 RVKAIREAV--GFDIKLRLDAN-----QAW-T-PKDAVKAIQALADYQ---IELVEQ-PVKRRDLEGLKYVTSQ-VNTTI 237 (354)
T ss_dssp HHHHHHHHH--CTTSEEEEECT-----TCS-C-HHHHHHHHHHTTTSC---EEEEEC-CSCTTCHHHHHHHHHH-CSSEE
T ss_pred HHHHHHHHc--CCCCeEEEECC-----CCC-C-HHHHHHHHHHHHhcC---CCEEEC-CCChhhHHHHHHHHHh-CCCCE
Confidence 445566543 12456777642 122 1 123445667777666 444444 4566789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHc-CCCEEEEeccCC-CHHHHHHHHHHHHHcCCcEEEEeCC
Q 015424 243 LCKEFIVDAWQIYYARTK-GADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEVHD 297 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~-GADaVLLiaaiL-~~~~L~~Li~~a~~LGL~aLVEVht 297 (407)
...+-+.+++++.+.... ++|.|.+..... .-.+...+.+.|+..|+.+++-+..
T Consensus 238 a~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 238 MADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCMA 294 (354)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred EEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 999999999999887665 579999987766 3456788999999999999876543
No 416
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=90.81 E-value=0.47 Score=47.90 Aligned_cols=119 Identities=12% Similarity=0.060 Sum_probs=86.5
Q ss_pred HHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE
Q 015424 164 IGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL 243 (407)
Q Consensus 164 ~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL 243 (407)
..++++.. .....|.++. ..|. . ..+..++++.+++.|...| |+..-..+++.+..+|+. +++||.
T Consensus 210 v~avR~a~--G~d~~l~vDa-----N~~~-~-~~~A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa 275 (418)
T 3r4e_A 210 FEELRKTY--GFDHHLLHDG-----HHRY-T-PQEAANLGKMLEPYQLFWL----EDCTPAENQEAFRLVRQH-TVTPLA 275 (418)
T ss_dssp HHHHHHHH--CSSSEEEEEC-----TTCS-C-HHHHHHHHHHHGGGCCSEE----ESCSCCSSGGGGHHHHHH-CCSCEE
T ss_pred HHHHHHHc--CCCCeEEEeC-----CCCC-C-HHHHHHHHHHHHhhCCCEE----ECCCCccCHHHHHHHHhc-CCCCEE
Confidence 45566543 1235676654 1222 1 2245567888888886655 345556788999999987 899999
Q ss_pred eccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEEeC
Q 015424 244 CKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVH 296 (407)
Q Consensus 244 ~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVEVh 296 (407)
..+-+.++++..++...| +|.|.+....+.. .+...+...|+..|+.+++-+.
T Consensus 276 ~dE~~~~~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 330 (418)
T 3r4e_A 276 VGEIFNTIWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGP 330 (418)
T ss_dssp ECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred EcCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 999999999998888776 8999998887754 5677888999999999876554
No 417
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=90.79 E-value=0.66 Score=46.08 Aligned_cols=105 Identities=10% Similarity=0.015 Sum_probs=79.7
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-----CCEEEEeccCC
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-----ADAVLLIAAVL 272 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-----ADaVLLiaaiL 272 (407)
+..++++.+++.|...| |+.+-..+++.++.+++. +++||...+-+.++.++.++...| +|.|.+.....
T Consensus 225 ~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~ 299 (392)
T 1tzz_A 225 TGIAYAKMLRDYPLFWY----EEVGDPLDYALQAALAEF-YPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALS 299 (392)
T ss_dssp HHHHHHHHHTTSCCSEE----ECCSCTTCHHHHHHHTTT-CCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTT
T ss_pred HHHHHHHHHHHcCCCee----cCCCChhhHHHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECcccc
Confidence 44567777777776643 445566789999999986 899999999999999999988887 99999977766
Q ss_pred -CHHHHHHHHHHHHHcCCc---EEEEeCCHHHHHHHhcc
Q 015424 273 -PDLDIRYMTKICKLLGLT---ALVEVHDEREMDRVLGI 307 (407)
Q Consensus 273 -~~~~L~~Li~~a~~LGL~---aLVEVht~eElerAl~l 307 (407)
+-.+..++.+.|+..|+. +++-.-...++.-+..+
T Consensus 300 GGit~~~~i~~~A~~~gi~~~~~~~~~~~~~~~hl~aa~ 338 (392)
T 1tzz_A 300 YGLCEYQRTLEVLKTHGWSPSRCIPHGGHQMSLNIAAGL 338 (392)
T ss_dssp TCHHHHHHHHHHHHHTTCCGGGBCCSCCBHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCCceEeecHHHHHHHHHHHhC
Confidence 345677889999999998 55432266666555544
No 418
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=90.78 E-value=0.51 Score=46.84 Aligned_cols=119 Identities=9% Similarity=0.076 Sum_probs=83.0
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....|..++- .| +. ..+..++++.+++.|.. -+ |+.+-..+++.++.+++. +++||
T Consensus 188 ~v~avr~a~--G~d~~l~vD~n-----~~-~~-~~~a~~~~~~l~~~~i~---~i-E~P~~~~~~~~~~~l~~~-~~ipI 253 (392)
T 2poz_A 188 RVKAVRDAA--GPEIELMVDLS-----GG-LT-TDETIRFCRKIGELDIC---FV-EEPCDPFDNGALKVISEQ-IPLPI 253 (392)
T ss_dssp HHHHHHHHH--CTTSEEEEECT-----TC-SC-HHHHHHHHHHHGGGCEE---EE-ECCSCTTCHHHHHHHHHH-CSSCE
T ss_pred HHHHHHHhc--CCCCEEEEECC-----CC-CC-HHHHHHHHHHHHhcCCC---EE-ECCCCcccHHHHHHHHhh-CCCCE
Confidence 344555532 12456776652 12 11 12445667777777743 33 344555789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCC-CHHHHHHHHHHHHHcCCcEEEEe
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL-~~~~L~~Li~~a~~LGL~aLVEV 295 (407)
...+-+.+++++.+....| +|.|.+..... +-.+...+.+.|+..|+.+++-+
T Consensus 254 a~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~ 308 (392)
T 2poz_A 254 AVGERVYTRFGFRKIFELQACGIIQPDIGTAGGLMETKKICAMAEAYNMRVAPHV 308 (392)
T ss_dssp EECTTCCHHHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHHHHHTTTCEECCCC
T ss_pred EecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEecCC
Confidence 9999999999998887766 89998877766 44567788999999999987743
No 419
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=90.75 E-value=4.7 Score=41.59 Aligned_cols=177 Identities=16% Similarity=0.133 Sum_probs=108.1
Q ss_pred HHHHHHHcCCcEEEEEecC--CcCCC----CHHHHHHH-H---hcCCCCc----EEeccccCC---------------HH
Q 015424 202 IARSYEKGGAACLSILTDE--KYFKG----SFENLEAV-R---SAGVKCP----LLCKEFIVD---------------AW 252 (407)
Q Consensus 202 iA~ay~~~GA~aISVLTd~--~~F~G----s~edL~~V-r---~a~v~lP----VL~KDFIid---------------~~ 252 (407)
+.++.++.++..|--.|.. ++|+| .++++..+ + +. .++| +|..|-.-+ ..
T Consensus 37 il~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~-~~vPv~pV~LhlDHg~~~~w~~~~~~~am~~a~e 115 (450)
T 3txv_A 37 AMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRFVGAIADR-IEFPREKILLGGDHLGPNPWKHLPADEAMAKAEA 115 (450)
T ss_dssp HHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHHHHHHHHH-TTCCGGGEEEEEEEESSGGGTTSCHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHHHHHHHHH-cCcCcccEEEECCCCCCcccccccHHHHHHHHHH
Confidence 4455555565555444543 23333 23444332 2 22 4678 678887765 56
Q ss_pred HHHHHHHcCCCEEEEeccCCC--------H----HHHHHHHHHHHHc----CCcE-EE-------------------EeC
Q 015424 253 QIYYARTKGADAVLLIAAVLP--------D----LDIRYMTKICKLL----GLTA-LV-------------------EVH 296 (407)
Q Consensus 253 QI~eAr~~GADaVLLiaaiL~--------~----~~L~~Li~~a~~L----GL~a-LV-------------------EVh 296 (407)
.|.++..+|=..|.++++.++ + +...+|+++|++. |..- -. ++.
T Consensus 116 ~i~~aI~AGFtSVMiD~S~~p~eeNi~lt~evva~rtaeL~~~A~~~~~~~g~~e~~yviGtEvpvpGGa~~~~~~~~~T 195 (450)
T 3txv_A 116 MITAYAKAGFTKLHLDTSMGCAGEPTALPDATTAARAARLAAVAEDAVGGRGGVLPVYIIGTEVPIPGGALEELDTLEVT 195 (450)
T ss_dssp HHHHHHTTTCCEEEECCCBCCSSSCSBCCHHHHHHHHHHHHHHHHHTC------CCEEEEECC-------------CCCC
T ss_pred HHHHHHHcCCCEEEECCCCCchhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeeeecCCCCccccccccCCCC
Confidence 788999999999999999873 1 2456788889874 2221 11 245
Q ss_pred CHHHHHHHhcc-------cCC-----cEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCce-EEEeeC
Q 015424 297 DEREMDRVLGI-------EGI-----ELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNII-VVGESG 363 (407)
Q Consensus 297 t~eElerAl~l-------~Ga-----~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~-vVAESG 363 (407)
+.+++++.++. .|. .++|+--- .|+-+++ +.....|++.+.+|.+.+ ++++ +|.+||
T Consensus 196 ~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVq--pGt~f~~-~~v~~y~~e~~~~L~~~v-------~~~P~LVlhgh 265 (450)
T 3txv_A 196 APEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQ--PGVEFGN-ENVIAYDRARAEKLSATL-------GQLHGMVFEAH 265 (450)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECC--CSCEECS-SCEECCCTTTTSHHHHGG-------GTSTTCEEEES
T ss_pred CHHHHHHHHHHHHHHHHHhCcccccCceeEEEec--CCcccCC-CCCCCCCHHHHHHHHHHh-------ccCCCEEEecC
Confidence 66787666542 122 35565210 1222222 233557788888887653 2344 666665
Q ss_pred C---CCHHHHHHHHHcCCCEEEEcccccC
Q 015424 364 L---FTPDDIAYVQEAGVKAVLVGESIVK 389 (407)
Q Consensus 364 I---~t~eD~~~l~~~GadaVLVGeaLmk 389 (407)
= .+.++++++.+.|+..+=||..|+-
T Consensus 266 StDy~~~e~l~~~V~~GiaklNVgp~Lt~ 294 (450)
T 3txv_A 266 STDYQTPDALRELVADGFAILKVGPGLTF 294 (450)
T ss_dssp CCTTCCHHHHHHHHHTTEEEEEECHHHHH
T ss_pred CCCCCCHHHHHHHHHcCCcEEEEChHHHH
Confidence 3 5899999999999999999988874
No 420
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=90.73 E-value=1.6 Score=42.77 Aligned_cols=141 Identities=16% Similarity=0.128 Sum_probs=91.7
Q ss_pred HHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHH
Q 015424 227 FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDR 303 (407)
Q Consensus 227 ~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~eEler 303 (407)
+.-|..+++. ..+|++.- +.|+.++.....+ +|.+-+.+.-+.+-+ |++.+-.+|..+++... +.+|++.
T Consensus 101 L~~L~~~~~e-~GLpv~Te--v~D~~~v~~l~~~-vd~lkIgA~~~~n~~---LLr~va~~gkPVilK~Gms~t~~ei~~ 173 (298)
T 3fs2_A 101 LEVFSDLKKE-YGFPVLTD--IHTEEQCAAVAPV-VDVLQIPAFLCRQTD---LLIAAARTGRVVNVKKGQFLAPWDMKN 173 (298)
T ss_dssp HHHHHHHHHH-HCCCEEEE--CCSHHHHHHHTTT-CSEEEECGGGTTCHH---HHHHHHHTTSEEEEECCTTCCGGGHHH
T ss_pred HHHHHHHHHh-cCCeEEEE--eCCHHHHHHHHhh-CCEEEECccccCCHH---HHHHHHccCCcEEEeCCCCCCHHHHHH
Confidence 5566666655 68999864 4789999888777 999999887776654 44455578999988875 6677766
Q ss_pred Hhcc---cCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEe---------------eCCC
Q 015424 304 VLGI---EGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGE---------------SGLF 365 (407)
Q Consensus 304 Al~l---~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAE---------------SGI~ 365 (407)
|++. .|.+-|.+-.|.. -|+| .++.+|+.....|.+ .+++|+.- +|.+
T Consensus 174 ave~i~~~Gn~~iiL~erg~---~y~~--~~~~vdl~~i~~lk~---------~~~PV~~D~sHsvq~p~~~~~~s~G~r 239 (298)
T 3fs2_A 174 VLAKITESGNPNVLATERGV---SFGY--NTLVSDMRALPIMAG---------LGAPVIFDATHSVQQPGGQGGSTGGQR 239 (298)
T ss_dssp HHHHHHTTTCCCEEEEECCE---ECSS--SCEECCTTHHHHHHT---------TTSCEEEEHHHHTCCCC--------CG
T ss_pred HHHHHHHcCCCeEEEEECCC---CCCC--CCCccCHHHHHHHHH---------cCCcEEEcCCCccccCCcccCCCCCch
Confidence 5442 3666566666654 2333 456688887666543 14455551 2321
Q ss_pred C--HHHHHHHHHcCCCEEEEccccc
Q 015424 366 T--PDDIAYVQEAGVKAVLVGESIV 388 (407)
Q Consensus 366 t--~eD~~~l~~~GadaVLVGeaLm 388 (407)
. +.-......+||||++|-.-+.
T Consensus 240 ~~v~~~a~AAvAlGAdGl~IE~H~t 264 (298)
T 3fs2_A 240 EFVETLARAAVAVGVAGFFIETHED 264 (298)
T ss_dssp GGHHHHHHHHHHHCCSEEEEEEESS
T ss_pred hhHHHHHHHHHHcCCCEEEEEecCC
Confidence 1 2334566788999999965543
No 421
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=90.70 E-value=0.18 Score=45.17 Aligned_cols=79 Identities=16% Similarity=0.038 Sum_probs=51.9
Q ss_pred CHHHHHHHHHHcCCcEE-EEEecCCcCCC-CHHHHHHHHhcCC--CCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCC
Q 015424 198 DPVEIARSYEKGGAACL-SILTDEKYFKG-SFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aI-SVLTd~~~F~G-s~edL~~Vr~a~v--~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~ 273 (407)
+|.+.++.+.+.|++.+ ...+-...|.| ++.. ..+|+. . ++||..-.. +.+..+.++..+|||+|.++.++..
T Consensus 115 ~p~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~-~~i~~~-~~~~~pi~v~GG-I~~~~~~~~~~aGad~vvvGsaI~~ 191 (207)
T 3ajx_A 115 DKATRAQEVRALGAKFVEMHAGLDEQAKPGFDLN-GLLAAG-EKARVPFSVAGG-VKVATIPAVQKAGAEVAVAGGAIYG 191 (207)
T ss_dssp SHHHHHHHHHHTTCSEEEEECCHHHHTSTTCCTH-HHHHHH-HHHTSCEEEESS-CCGGGHHHHHHTTCSEEEESHHHHT
T ss_pred ChHHHHHHHHHhCCCEEEEEecccccccCCCchH-HHHHHh-hCCCCCEEEECC-cCHHHHHHHHHcCCCEEEEeeeccC
Confidence 67777777777899998 44333222333 2322 445543 2 678776544 5577899999999999999988875
Q ss_pred HHHHHH
Q 015424 274 DLDIRY 279 (407)
Q Consensus 274 ~~~L~~ 279 (407)
.++..+
T Consensus 192 ~~dp~~ 197 (207)
T 3ajx_A 192 AADPAA 197 (207)
T ss_dssp SSSHHH
T ss_pred CCCHHH
Confidence 444333
No 422
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=90.68 E-value=0.49 Score=47.80 Aligned_cols=128 Identities=7% Similarity=-0.038 Sum_probs=90.9
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....|..+.- .|+ . ..+..++++.+++.|...| |+..-.++++.++.+|+. +++||
T Consensus 219 ~v~avReav--G~d~~L~vDaN-----~~~-~-~~~Ai~~~~~Le~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPI 284 (412)
T 3stp_A 219 RVEAVREVI--GYDNDLMLECY-----MGW-N-LDYAKRMLPKLAPYEPRWL----EEPVIADDVAGYAELNAM-NIVPI 284 (412)
T ss_dssp HHHHHHHHH--CSSSEEEEECT-----TCS-C-HHHHHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHT-CSSCE
T ss_pred HHHHHHHHc--CCCCeEEEECC-----CCC-C-HHHHHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHhC-CCCCE
Confidence 345566543 12356776641 222 1 2244567888888887655 455667789999999986 89999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEEeCCHHHHHHH
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHDEREMDRV 304 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVEVht~eElerA 304 (407)
...+-+.++++..+....| +|.|.+....... .+...+...|+..|+.+++-+....-+.-+
T Consensus 285 a~dE~~~~~~~~~~li~~~a~D~v~ik~~~~GGit~a~kia~~A~a~gi~v~~h~~~aa~~hla 348 (412)
T 3stp_A 285 SGGEHEFSVIGCAELINRKAVSVLQYDTNRVGGITAAQKINAIAEAAQIPVIPHAGQMHNYHLT 348 (412)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHHTCCBCCSSCSHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEecChhhcCCHHHHHHHHHHHHHcCCEEEeccHHHHHHHHH
Confidence 9999999999999888765 8998888776643 567778889999999988766544444444
No 423
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=90.65 E-value=0.96 Score=44.75 Aligned_cols=134 Identities=16% Similarity=0.203 Sum_probs=83.5
Q ss_pred CCccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEE------E-ecCC-cCCCC-HHH
Q 015424 159 PARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSI------L-TDEK-YFKGS-FEN 229 (407)
Q Consensus 159 ~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISV------L-Td~~-~F~Gs-~ed 229 (407)
..+.|.++++. ....|+.-.|..|--. +. ...+..-||+..-+. + -|.+ .|-|+ -+-
T Consensus 156 ~t~~~v~aa~g------~~~~i~~TRKT~PglR-------~l-~kyAV~~GGg~nHR~gL~d~vlikdnHi~~~G~i~~A 221 (320)
T 3paj_A 156 ATARYVQELKG------TQCRLLDTRKTIPGLR-------SA-LKYAVACGGGYNHRIGVFDAYLIKENHIIACGGIRQA 221 (320)
T ss_dssp HHHHHHHHHTT------SSCEEECCSCCCTTCH-------HH-HHHHHHHTTCBCCCSSSSSCEEECHHHHHHHTSHHHH
T ss_pred HHHHHHHHhCC------CCeEEEeecCCCccch-------HH-HhhhHHhcCccceecccchhhccHHHHHHHhCCHHHH
Confidence 34667777653 3468888888877421 11 123334566532221 1 1111 23344 355
Q ss_pred HHHHHhcCCCCcE--EeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHH
Q 015424 230 LEAVRSAGVKCPL--LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRV 304 (407)
Q Consensus 230 L~~Vr~a~v~lPV--L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~eElerA 304 (407)
++.+|+.....|| ++.. ..|+.+|..+|||.|.|.. .+.+++++.++.. +=.+.+|++ |++.+...
T Consensus 222 v~~ar~~~p~~kIeVEVdt----ldea~eAl~aGaD~I~LDn--~~~~~l~~av~~l---~~~v~ieaSGGIt~~~I~~~ 292 (320)
T 3paj_A 222 ISTAKQLNPGKPVEVETET----LAELEEAISAGADIIMLDN--FSLEMMREAVKIN---AGRAALENSGNITLDNLKEC 292 (320)
T ss_dssp HHHHHHHSTTSCEEEEESS----HHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHH---TTSSEEEEESSCCHHHHHHH
T ss_pred HHHHHHhCCCCeEEEEECC----HHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHh---CCCCeEEEECCCCHHHHHHH
Confidence 5666654234454 4554 3688899999999999976 5666776666543 336888887 88899888
Q ss_pred hcccCCcEEEee
Q 015424 305 LGIEGIELIGIN 316 (407)
Q Consensus 305 l~l~Ga~iIGIN 316 (407)
.+. |+|+|++.
T Consensus 293 a~t-GVD~isvG 303 (320)
T 3paj_A 293 AET-GVDYISVG 303 (320)
T ss_dssp HTT-TCSEEECT
T ss_pred HHc-CCCEEEEC
Confidence 886 99999984
No 424
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=90.63 E-value=7 Score=35.79 Aligned_cols=171 Identities=14% Similarity=0.076 Sum_probs=98.9
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCH-----HHHHHHHhcCCCCcEEe-ccccC-CHHHHHH-HHHcCCCEEEEec
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSF-----ENLEAVRSAGVKCPLLC-KEFIV-DAWQIYY-ARTKGADAVLLIA 269 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~-----edL~~Vr~a~v~lPVL~-KDFIi-d~~QI~e-Ar~~GADaVLLia 269 (407)
++. -|++..++||++|-.. ||..|+ +..+.+.+. +.-.+.. .=|.- ++.+|.+ +..+|.|.|-|--
T Consensus 10 ~~e-da~~a~~~GaD~iGfi----f~~~SpR~V~~~~a~~i~~~-~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG 83 (203)
T 1v5x_A 10 RLE-DALLAEALGAFALGFV----LAPGSRRRIAPEAARAIGEA-LGPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLHG 83 (203)
T ss_dssp CHH-HHHHHHHHTCSEEEEE----CCTTCTTBCCHHHHHHHHHH-SCSSSEEEEEESSCCHHHHHHHHHHTTCSEEEECS
T ss_pred cHH-HHHHHHHcCCCEEEEE----ecCCCCCcCCHHHHHHHHHh-CCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECC
Confidence 444 4667778899999998 344544 445555443 2211221 11432 3556655 5678999999953
Q ss_pred cCCCHHHHHHHHHHHHHcCCcEE--EEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhccc
Q 015424 270 AVLPDLDIRYMTKICKLLGLTAL--VEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGER 347 (407)
Q Consensus 270 aiL~~~~L~~Li~~a~~LGL~aL--VEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~ 347 (407)
--+++.+..| + . |+..| +-+++..++ .+... .++.+=+... .+=|..+| |++....+..
T Consensus 84 -~e~~~~~~~l-~---~-~~~vika~~v~~~~~l-~~~~~-~~d~~LlD~~------~gGtG~~f--dW~~l~~~~~--- 144 (203)
T 1v5x_A 84 -EEPPEWAEAV-G---R-FYPVIKAFPLEGPARP-EWADY-PAQALLLDGK------RPGSGEAY--PRAWAKPLLA--- 144 (203)
T ss_dssp -CCCHHHHHHH-T---T-TSCEEEEEECSSSCCG-GGGGS-SCSEEEEECS------STTSCCCC--CGGGGHHHHH---
T ss_pred -CCCHHHHHHh-c---c-CCCEEEEEEcCChHhh-hhhhc-CCCEEEEcCC------CCCCCCcc--CHHHHHhhhc---
Confidence 3355444333 1 1 56666 455666566 44443 3566555332 12233444 5544444211
Q ss_pred ccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC---CChHHHHHhhh
Q 015424 348 GEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ---DDPGKGITGLF 401 (407)
Q Consensus 348 ~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~---~dp~~~i~~L~ 401 (407)
.+.+++..||| +|+++..+...+++||=|.+.+-.. .|+ .++++++
T Consensus 145 ------~~~p~~LAGGL-~peNV~~ai~~~p~gVDvsSGvE~~pG~KD~-~ki~~fi 193 (203)
T 1v5x_A 145 ------TGRRVILAGGI-APENLEEVLALRPYALDLASGVEEAPGVKSA-EKLRALF 193 (203)
T ss_dssp ------TTSCEEECSSC-CSTTHHHHHHHCCSEEEESGGGEEETTEECH-HHHHHHH
T ss_pred ------cCCcEEEECCC-CHHHHHHHHhcCCCEEEeCCceecCCCCcCH-HHHHHHH
Confidence 13468999999 9999966557799999999999853 243 3445544
No 425
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=90.62 E-value=0.72 Score=46.15 Aligned_cols=72 Identities=22% Similarity=0.152 Sum_probs=53.2
Q ss_pred HHHHHHHHHcCCcEEEEEecCC-----------------------cCC--C--CHHHHHHHHhcCC-CCcEEeccccCCH
Q 015424 200 VEIARSYEKGGAACLSILTDEK-----------------------YFK--G--SFENLEAVRSAGV-KCPLLCKEFIVDA 251 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~-----------------------~F~--G--s~edL~~Vr~a~v-~lPVL~KDFIid~ 251 (407)
.+.|+.+++.||++|.|--=.+ +|. | ...-|..++++ + ++||+.-..|.++
T Consensus 201 ~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~-~~~ipvia~GGI~~~ 279 (368)
T 3vkj_A 201 METAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYS-VPDSFLVGSGGIRSG 279 (368)
T ss_dssp HHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHH-STTCEEEEESSCCSH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHH-cCCCcEEEECCCCCH
Confidence 3679999999999998831100 011 1 11345566665 5 5999999999999
Q ss_pred HHHHHHHHcCCCEEEEeccCC
Q 015424 252 WQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 252 ~QI~eAr~~GADaVLLiaaiL 272 (407)
.++..|.++|||+|.+....|
T Consensus 280 ~d~~kal~lGA~~v~ig~~~l 300 (368)
T 3vkj_A 280 LDAAKAIALGADIAGMALPVL 300 (368)
T ss_dssp HHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHHHHcCCCEEEEcHHHH
Confidence 999999999999999986555
No 426
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=90.61 E-value=5.2 Score=36.09 Aligned_cols=129 Identities=12% Similarity=0.121 Sum_probs=73.3
Q ss_pred HHHHHHHcCCCEEEEeccCCC--------HHHHHHHHHHHHHcCCcEEEEeC--------CHHHHHHHhcccCCcEEEee
Q 015424 253 QIYYARTKGADAVLLIAAVLP--------DLDIRYMTKICKLLGLTALVEVH--------DEREMDRVLGIEGIELIGIN 316 (407)
Q Consensus 253 QI~eAr~~GADaVLLiaaiL~--------~~~L~~Li~~a~~LGL~aLVEVh--------t~eElerAl~l~Ga~iIGIN 316 (407)
.+..|..+||+.|.+....-. -+.|.++.++|++.|+...+|-| +.+++.+.++.-+ +-+|++
T Consensus 90 ~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~l~~~v~-~~~g~~ 168 (272)
T 2q02_A 90 LLRDAQGVGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQQLIREAG-SPFKVL 168 (272)
T ss_dssp HHHHHHHHTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHHHHHHHHHHHT-CCCEEE
T ss_pred HHHHHHHhCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccCHHHHHHHHHHhC-cCeEEE
Confidence 466688999999987543221 44567788888899999999988 4677766665325 567774
Q ss_pred ccccccccccccccccccCchhHHHH-hhccccccccc------------CCceEEEeeC-CCCHHHHHHHHHcCCCEEE
Q 015424 317 NRNLAISIFSYRTETFEVDNSNTKKL-LEGERGEIIRQ------------KNIIVVGESG-LFTPDDIAYVQEAGVKAVL 382 (407)
Q Consensus 317 nRdL~~~~~~~t~~Tf~vDl~~t~~L-~~~~~~~~i~~------------~~v~vVAESG-I~t~eD~~~l~~~GadaVL 382 (407)
- |. ++..-++ .-+. +....+ .+.+..-++.. .....+.+|| |.=.+-++.+.+.|+++.+
T Consensus 169 ~-D~-~h~~~~~--~~~~--~~~~~l~~~~i~~vH~~D~~~~~~~~~~~~~~~~~~G~G~~id~~~~~~~L~~~gy~g~~ 242 (272)
T 2q02_A 169 L-DT-FHHHLYE--EAEK--EFASRIDISAIGLVHLSGVEDTRPTEALADEQRIMLSEKDVMQNYQQVQRLENMGYRGIY 242 (272)
T ss_dssp E-EH-HHHHHCT--THHH--HHHHHCCGGGEEEEEECBCCCCSCGGGCCGGGCBCCCTTCSSCHHHHHHHHHHTTCCSCE
T ss_pred E-Ec-hHhhccC--CCch--hhhhhCCHhHEEEEEeCCCcCCCCchhccccccccCCCCCcccHHHHHHHHHhcCCCCce
Confidence 2 32 1110000 0000 111111 11111000100 0112345677 7666677888899999988
Q ss_pred Eccccc
Q 015424 383 VGESIV 388 (407)
Q Consensus 383 VGeaLm 388 (407)
+=|.+.
T Consensus 243 ~lE~~~ 248 (272)
T 2q02_A 243 AFEPFS 248 (272)
T ss_dssp EECCCC
T ss_pred EEEecC
Confidence 888554
No 427
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=90.59 E-value=0.8 Score=43.19 Aligned_cols=169 Identities=12% Similarity=0.100 Sum_probs=86.9
Q ss_pred cEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE--e--ccccCCHH-HHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHH
Q 015424 212 ACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--C--KEFIVDAW-QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKL 286 (407)
Q Consensus 212 ~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL--~--KDFIid~~-QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~ 286 (407)
.++=|-++= |...+++-++.+++. +.+|+ . -|..-+.. .+..+..+|||.+.+.+ ....+-++.+.+.+++
T Consensus 35 ~~~Kvg~~l-f~~~G~~~v~~L~~~--g~~iflDlK~~DI~nTv~~~~~~~~~~gad~vTvh~-~~G~~~~~~a~~~~~~ 110 (239)
T 3tr2_A 35 CHLKIGSIL-FTRYGPAFVEELMQK--GYRIFLDLKFYDIPQTVAGACRAVAELGVWMMNIHI-SGGRTMMETVVNALQS 110 (239)
T ss_dssp CEEEEEHHH-HHHHHHHHHHHHHHT--TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEG-GGCHHHHHHHHHHHHT
T ss_pred cEEEeCHHH-HHhhCHHHHHHHHhc--CCCEEEEecccccchHHHHHHHHHHhCCCCEEEEec-cCCHHHHHHHHHHHHh
Confidence 344343332 333456777788764 56776 3 36433332 44567789999998854 4556678888887766
Q ss_pred cC---------CcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccc-------cccccCchhHHHHhhcccccc
Q 015424 287 LG---------LTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRT-------ETFEVDNSNTKKLLEGERGEI 350 (407)
Q Consensus 287 LG---------L~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~-------~Tf~vDl~~t~~L~~~~~~~~ 350 (407)
.+ +.+|.+ .+.+++. ++ |.. ..+...-..+.+ .-+-........+.+.
T Consensus 111 ~~~~~~~~l~~Vt~LTS-~~~~~l~---~~-g~~------~~~~~~v~~~A~~a~~~g~~GvV~s~~e~~~ir~~----- 174 (239)
T 3tr2_A 111 ITLKEKPLLIGVTILTS-LDGSDLK---TL-GIQ------EKVPDIVCRMATLAKSAGLDGVVCSAQEAALLRKQ----- 174 (239)
T ss_dssp CCCSSCCEEEEECSCTT-CCHHHHH---HT-TCC------SCHHHHHHHHHHHHHHHTCCEEECCHHHHHHHHTT-----
T ss_pred cCcCCCceEEEEEEEee-CCHHHHH---hc-CCC------CCHHHHHHHHHHHHHHcCCCEEEECchhHHHHHHh-----
Confidence 53 111222 1222332 11 110 000000000000 0111111222233222
Q ss_pred cccCCceEEEeeCCCCHH----------HHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 351 IRQKNIIVVGESGLFTPD----------DIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 351 i~~~~v~vVAESGI~t~e----------D~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
.+.+. ++.--||.-.. .+..+.++|+|-++||.+|++++||.++++++..
T Consensus 175 -~~~~f-l~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~lVvGr~I~~a~dp~~a~~~i~~ 234 (239)
T 3tr2_A 175 -FDRNF-LLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYLVIGRPITQSTDPLKALEAIDK 234 (239)
T ss_dssp -CCTTS-EEEECCBC----------CCBCHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred -cCCCc-EEECCCcCCCCCCcCcccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHH
Confidence 13343 34446664221 1456778999999999999999999999988754
No 428
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=90.53 E-value=0.73 Score=46.22 Aligned_cols=93 Identities=13% Similarity=0.119 Sum_probs=74.3
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCCC-HH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~ 275 (407)
+..++++.+++.|...| |+..-..+++.++.+|+. +++||...+-+.++++..++...| +|.|.+...... -.
T Consensus 223 ~A~~~~~~l~~~~i~~i----EeP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit 297 (404)
T 4e5t_A 223 GAKRLARRLEAYDPLWF----EEPIPPEKPEDMAEVARY-TSIPVATGERLCTKYEFSRVLETGAASILQMNLGRVGGLL 297 (404)
T ss_dssp HHHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-CSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTSSCHH
T ss_pred HHHHHHHHHhhcCCcEE----ECCCCcccHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCccccCCHH
Confidence 45567888888886655 344556789999999987 899999999999999998887666 899999888773 45
Q ss_pred HHHHHHHHHHHcCCcEEEEeCC
Q 015424 276 DIRYMTKICKLLGLTALVEVHD 297 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVEVht 297 (407)
+...+.+.|+.+|+.++ +|+
T Consensus 298 ~~~~ia~~A~~~gi~~~--~h~ 317 (404)
T 4e5t_A 298 EAKKIAAMAECHSAQIA--PHL 317 (404)
T ss_dssp HHHHHHHHHHHTTCEEC--CCC
T ss_pred HHHHHHHHHHHcCCEEe--ecC
Confidence 67788999999999864 454
No 429
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=90.51 E-value=4.7 Score=36.65 Aligned_cols=134 Identities=18% Similarity=0.088 Sum_probs=82.8
Q ss_pred cHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCc
Q 015424 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP 241 (407)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lP 241 (407)
.|.+.|..... .++..+..|+|...... ..-...+++...+ ..-+-+ ..-+.+.|..+|+...++|
T Consensus 81 tL~evl~~~~~-~~~~~l~iEiK~~~~~~-----~~~~~~v~~~l~~--~~~v~i------~Sf~~~~l~~~~~~~p~~~ 146 (224)
T 1vd6_A 81 RLEEVLALKEA-FPQAVFNVELKSFPGLG-----EEAARRLAALLRG--REGVWV------SSFDPLALLALRKAAPGLP 146 (224)
T ss_dssp BHHHHHGGGGT-CTTCEEEEEECCCTTSH-----HHHHHHHHHHTTT--CSSEEE------EESCHHHHHHHHHHCTTSC
T ss_pred CHHHHHHhhhc-cCCceEEEEECCCCCcc-----HHHHHHHHHHHhc--CCcEEE------EeCCHHHHHHHHHHCCCCC
Confidence 34455543320 13578999999644321 0012234444444 222222 1236888999987534566
Q ss_pred E--EeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEE-eCCHHHHHHHhcccCCcEEEeecc
Q 015424 242 L--LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGIELIGINNR 318 (407)
Q Consensus 242 V--L~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVE-Vht~eElerAl~l~Ga~iIGINnR 318 (407)
+ +..+.. ...+...|++++......+++ .+++.+++.|+.+++= |.+.+++.+.+++ |++.|-.|..
T Consensus 147 ~~~l~~~~~-----~~~~~~~~~~~i~~~~~~~~~----~~v~~~~~~G~~v~~wtvn~~~~~~~l~~~-GvdgI~TD~p 216 (224)
T 1vd6_A 147 LGFLMAEDH-----SALLPCLGVEAVHPHHALVTE----EAVAGWRKRGLFVVAWTVNEEGEARRLLAL-GLDGLIGDRP 216 (224)
T ss_dssp EEEEESSCC-----GGGGGGSCCSEEEEBGGGCCH----HHHHHHHHTTCEEEEECCCCHHHHHHHHHT-TCSEEEESCH
T ss_pred EEEEecccc-----HHHHHHcCCcEEecCcccCCH----HHHHHHHHCCCEEEEEeCCCHHHHHHHHhc-CCCEEEcCCH
Confidence 4 333321 223567899999998887764 3778899999988554 6899999999998 9998877644
Q ss_pred c
Q 015424 319 N 319 (407)
Q Consensus 319 d 319 (407)
+
T Consensus 217 ~ 217 (224)
T 1vd6_A 217 E 217 (224)
T ss_dssp H
T ss_pred H
Confidence 3
No 430
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=90.50 E-value=10 Score=34.67 Aligned_cols=175 Identities=19% Similarity=0.169 Sum_probs=100.7
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCH-----HHHHHHHhcCCCCcEEe-ccccC-CHHHHHH-HHHcCCCEEEEec
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSF-----ENLEAVRSAGVKCPLLC-KEFIV-DAWQIYY-ARTKGADAVLLIA 269 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~-----edL~~Vr~a~v~lPVL~-KDFIi-d~~QI~e-Ar~~GADaVLLia 269 (407)
++. -|+...++||++|-.. ||..|+ +..+.+.+. +.-.+.. .=|.- ++.+|.+ +..+|.|.|-|-.
T Consensus 11 ~~e-da~~a~~~GaD~iGfi----f~~~SpR~V~~~~a~~i~~~-~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG 84 (205)
T 1nsj_A 11 NLE-DALFSVESGADAVGFV----FYPKSKRYISPEDARRISVE-LPPFVFRVGVFVNEEPEKILDVASYVQLNAVQLHG 84 (205)
T ss_dssp SHH-HHHHHHHHTCSEEEEE----CCTTCTTBCCHHHHHHHHHH-SCSSSEEEEEESSCCHHHHHHHHHHHTCSEEEECS
T ss_pred cHH-HHHHHHHcCCCEEEEE----ecCCCCCcCCHHHHHHHHHh-CCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECC
Confidence 444 4667778899999998 444554 445555443 2211221 11332 3456655 5678999999953
Q ss_pred cCCCHHHHHHHHHHHHHcCCcEE--EEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhccc
Q 015424 270 AVLPDLDIRYMTKICKLLGLTAL--VEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGER 347 (407)
Q Consensus 270 aiL~~~~L~~Li~~a~~LGL~aL--VEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~ 347 (407)
. -+++.+..| +. ++..| +-+++..+++.+... .++.+=+.... +.+|=|..+| |++....+. .
T Consensus 85 ~-e~~~~~~~l----~~-~~~vika~~v~~~~~l~~~~~~-~~d~~LlD~~~---~~~GGtG~~f--dw~~l~~~~-~-- 149 (205)
T 1nsj_A 85 E-EPIELCRKI----AE-RILVIKAVGVSNERDMERALNY-REFPILLDTKT---PEYGGSGKTF--DWSLILPYR-D-- 149 (205)
T ss_dssp C-CCHHHHHHH----HT-TSEEEEEEEESSHHHHHHHGGG-TTSCEEEEESC---SSSSSCCSCC--CGGGTGGGG-G--
T ss_pred C-CCHHHHHHH----hc-CCCEEEEEEcCCHHHHHHHHHc-CCCEEEECCCC---CCCCCCCCcc--CHHHHHhhh-c--
Confidence 2 244333222 11 56665 567788888776654 36655553321 1123344555 443322210 0
Q ss_pred ccccccCCceEEEeeCCCCHHHHHHH-HHcCCCEEEEcccccCC---CChHHHHHhhh
Q 015424 348 GEIIRQKNIIVVGESGLFTPDDIAYV-QEAGVKAVLVGESIVKQ---DDPGKGITGLF 401 (407)
Q Consensus 348 ~~~i~~~~v~vVAESGI~t~eD~~~l-~~~GadaVLVGeaLmk~---~dp~~~i~~L~ 401 (407)
...+++..||| +|+++..+ ...+++||=|.+.+-.. .|+ .++++++
T Consensus 150 ------~~~p~~LAGGL-~peNV~~ai~~~~p~gVDvsSGvE~~pG~KD~-~ki~~fi 199 (205)
T 1nsj_A 150 ------RFRYLVLSGGL-NPENVRSAIDVVRPFAVDVSSGVEAFPGKKDH-DSIKMFI 199 (205)
T ss_dssp ------GSSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGGEEETTEECH-HHHHHHH
T ss_pred ------CCCcEEEECCC-CHHHHHHHHHhcCCCEEEECCceecCCCCcCH-HHHHHHH
Confidence 13478999999 99999664 55799999999999853 233 3455554
No 431
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=90.47 E-value=1 Score=43.72 Aligned_cols=139 Identities=17% Similarity=0.196 Sum_probs=88.2
Q ss_pred CCccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCC--------cCCCCH-HH
Q 015424 159 PARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEK--------YFKGSF-EN 229 (407)
Q Consensus 159 ~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~--------~F~Gs~-ed 229 (407)
..+.|.+++. +....|..-+|..|-. -+.+- .+..-||+..=+.--... .|.|+. +-
T Consensus 119 ~t~~~v~~~~------g~~~~i~~tRKt~Pgl-------r~l~k-~Av~~GG~~nhR~gl~d~vlikdnHi~~ag~i~~a 184 (284)
T 1qpo_A 119 ATAAWVDAVR------GTKAKIRDTRKTLPGL-------RALQK-YAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDA 184 (284)
T ss_dssp HHHHHHHHTT------TSSCEEECCSCCCTTC-------HHHHH-HHHHHTTCBCCCCSSSSSEEECHHHHHHHSSHHHH
T ss_pred HHHHHHHHhc------CCCcEEEEecccCCCc-------hHHHh-hhhhhcCcccccccchhhhcccHhHHHHcCCHHHH
Confidence 3466776665 2346899999999942 11111 122345543222110001 112443 35
Q ss_pred HHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHhc
Q 015424 230 LEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLG 306 (407)
Q Consensus 230 L~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~eElerAl~ 306 (407)
++.+|+.....||.. +. .+..|+.+|..+|||.|+|.. ++++++++.++..+..+-.+.+|++ |++.+....+
T Consensus 185 v~~ar~~~~~~~I~V-ev-~t~eea~eal~aGaD~I~LDn--~~~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a~ 260 (284)
T 1qpo_A 185 LRAVRNAAPDLPCEV-EV-DSLEQLDAVLPEKPELILLDN--FAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAE 260 (284)
T ss_dssp HHHHHHHCTTSCEEE-EE-SSHHHHHHHGGGCCSEEEEET--CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHH
T ss_pred HHHHHHhCCCCCEEE-Ee-CCHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHHh
Confidence 666665422235554 22 246899999999999999987 6788898888888776556788887 7888888888
Q ss_pred ccCCcEEEee
Q 015424 307 IEGIELIGIN 316 (407)
Q Consensus 307 l~Ga~iIGIN 316 (407)
. |+++|++-
T Consensus 261 t-GVD~isvG 269 (284)
T 1qpo_A 261 T-GVDYLAVG 269 (284)
T ss_dssp T-TCSEEECG
T ss_pred c-CCCEEEEC
Confidence 6 99999984
No 432
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=90.46 E-value=0.67 Score=46.70 Aligned_cols=93 Identities=6% Similarity=0.045 Sum_probs=74.2
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHc-CCCEEEEeccCCCH-H
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK-GADAVLLIAAVLPD-L 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~-GADaVLLiaaiL~~-~ 275 (407)
+..++++.+++.|...| |+..-..+++.+..+|+. +++||...+-+.+++++.++... ++|.|.+....... .
T Consensus 193 ~A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~~~GGit 267 (405)
T 3rr1_A 193 MAKVLIKELEPYRPLFI----EEPVLAEQAETYARLAAH-THLPIAAGERMFSRFDFKRVLEAGGVSILQPDLSHAGGIT 267 (405)
T ss_dssp HHHHHHHHHGGGCCSCE----ECSSCCSSTHHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHHCCCSEECCBTTTTTHHH
T ss_pred HHHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHhc-CCCCEEecCCcCCHHHHHHHHHHhCCCeEEEChhhcCCHH
Confidence 44567888888886655 345556789999999986 89999999999999999888765 58999998887754 5
Q ss_pred HHHHHHHHHHHcCCcEEEEe
Q 015424 276 DIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVEV 295 (407)
+...+...|+.+|+.+++-+
T Consensus 268 ea~kia~lA~~~gi~v~~h~ 287 (405)
T 3rr1_A 268 ECVKIAAMAEAYDVALAPHC 287 (405)
T ss_dssp HHHHHHHHHHTTTCEECCBC
T ss_pred HHHHHHHHHHHcCCEEEeCC
Confidence 67788899999999976543
No 433
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=90.41 E-value=1.6 Score=43.94 Aligned_cols=118 Identities=10% Similarity=0.040 Sum_probs=85.4
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCC-cCCCCHHHHHHHHhcCCCCc
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEK-YFKGSFENLEAVRSAGVKCP 241 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~-~F~Gs~edL~~Vr~a~v~lP 241 (407)
...++++.. .....|..+.- .|+ . ..+..++++.+++.|...| |+. .-.++++.++.+|+. +++|
T Consensus 202 ~v~avR~a~--g~d~~l~vDaN-----~~~-~-~~~A~~~~~~L~~~~i~~i----EqP~~~~~~~~~~~~l~~~-~~iP 267 (410)
T 3dip_A 202 PFRKIRAAV--GQRIEIMCELH-----SLW-G-THAAARICNALADYGVLWV----EDPIAKMDNIPAVADLRRQ-TRAP 267 (410)
T ss_dssp HHHHHHHHH--TTSSEEEEECT-----TCB-C-HHHHHHHHHHGGGGTCSEE----ECCBSCTTCHHHHHHHHHH-HCCC
T ss_pred HHHHHHHHc--CCCceEEEECC-----CCC-C-HHHHHHHHHHHHhcCCCEE----ECCCCCcccHHHHHHHHhh-CCCC
Confidence 355666553 12456777642 222 1 1244566788888886554 344 355689999999986 8999
Q ss_pred EEeccccCCHHHHHHHHHcC-CCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEE
Q 015424 242 LLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVE 294 (407)
Q Consensus 242 VL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVE 294 (407)
|...+-+.++++..++...| +|.|.+...... -.+...+.+.|+.+|+.++.-
T Consensus 268 Ia~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h 322 (410)
T 3dip_A 268 ICGGENLAGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAPH 322 (410)
T ss_dssp EEECTTCCSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEEC
T ss_pred EEecCCcCCHHHHHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHcCCEEeee
Confidence 99999999999999887775 799999888774 467788999999999998753
No 434
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=90.39 E-value=1.2 Score=44.30 Aligned_cols=117 Identities=14% Similarity=0.041 Sum_probs=86.7
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. ....+.++.- |-+. ..+..++++.+++.|...| |+.+-..+++.+..+|+. +++||
T Consensus 182 ~v~avR~a~---~~~~l~vDan------~~~~-~~~A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 246 (385)
T 3i6e_A 182 RLELIARDF---PEFRVRVDYN------QGLE-IDEAVPRVLDVAQFQPDFI----EQPVRAHHFELMARLRGL-TDVPL 246 (385)
T ss_dssp HHHHHHHHC---TTSEEEEECT------TCCC-GGGHHHHHHHHHTTCCSCE----ECCSCTTCHHHHHHHHTT-CSSCE
T ss_pred HHHHHHHhC---CCCeEEEECC------CCCC-HHHHHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHHh-CCCCE
Confidence 345666543 2456777752 2222 2356788999999886654 455666789999999986 89999
Q ss_pred EeccccCCHHHHHHHHHc-CCCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEE
Q 015424 243 LCKEFIVDAWQIYYARTK-GADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVE 294 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~-GADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVE 294 (407)
...+-+.+.+++.++... ++|.|.+...... -.+...+.+.|+..|+.+++-
T Consensus 247 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~ 300 (385)
T 3i6e_A 247 LADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGG 300 (385)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred EEeCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEeC
Confidence 999999999999887655 5899998777653 356778899999999999764
No 435
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=90.39 E-value=1.1 Score=44.40 Aligned_cols=120 Identities=13% Similarity=0.094 Sum_probs=86.1
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....+..+. -.|+ . ..+..++++.+++.|...| |+.+-..+++.+..+|+. +.+||
T Consensus 173 ~v~avR~~~--g~~~~l~vDa-----N~~~-~-~~~A~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPI 238 (368)
T 3q45_A 173 RIRMIREAA--GDSITLRIDA-----NQGW-S-VETAIETLTLLEPYNIQHC----EEPVSRNLYTALPKIRQA-CRIPI 238 (368)
T ss_dssp HHHHHHHHH--CSSSEEEEEC-----TTCB-C-HHHHHHHHHHHGGGCCSCE----ECCBCGGGGGGHHHHHHT-CSSCE
T ss_pred HHHHHHHHh--CCCCeEEEEC-----CCCC-C-hHHHHHHHHHHhhcCCCEE----ECCCChhHHHHHHHHHhh-CCCCE
Confidence 345566543 1235677763 1122 1 1244567888888886655 344555678889999986 89999
Q ss_pred EeccccCCHHHHHHHHHc-CCCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEEeC
Q 015424 243 LCKEFIVDAWQIYYARTK-GADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEVH 296 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~-GADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVEVh 296 (407)
...+-+.+++++.+.... ++|.|.+...... -.+...+.+.|+.+|+.+++-+.
T Consensus 239 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 294 (368)
T 3q45_A 239 MADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGGF 294 (368)
T ss_dssp EESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCS
T ss_pred EEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecCc
Confidence 999999999999888765 5899999888774 45678899999999999988554
No 436
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=90.35 E-value=0.36 Score=48.01 Aligned_cols=117 Identities=13% Similarity=0.116 Sum_probs=81.3
Q ss_pred HHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE
Q 015424 164 IGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL 243 (407)
Q Consensus 164 ~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL 243 (407)
..++++.. .....|..++- .| +. ..+..++++.+++.|.. -+ |+.+-..+++.++.+++. +++||.
T Consensus 199 v~avr~av--G~d~~l~vDan-----~~-~~-~~~ai~~~~~l~~~~i~---~i-E~P~~~~d~~~~~~l~~~-~~iPIa 264 (403)
T 2ox4_A 199 VEAIRNAV--GPDVDIIVENH-----GH-TD-LVSAIQFAKAIEEFNIF---FY-EEINTPLNPRLLKEAKKK-IDIPLA 264 (403)
T ss_dssp HHHHHHHH--CTTSEEEEECT-----TC-SC-HHHHHHHHHHHGGGCEE---EE-ECCSCTTSTHHHHHHHHT-CCSCEE
T ss_pred HHHHHHHh--CCCCeEEEECC-----CC-CC-HHHHHHHHHHHHhhCCC---EE-eCCCChhhHHHHHHHHHh-CCCCEE
Confidence 44555532 12466777652 12 11 12445667777777743 33 444556788999999986 899999
Q ss_pred eccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEE
Q 015424 244 CKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVE 294 (407)
Q Consensus 244 ~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVE 294 (407)
..+-+.+++++.++...| +|.|.+....... .+...+.+.|+..|+.+++-
T Consensus 265 ~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h 317 (403)
T 2ox4_A 265 SGERIYSRWGFLPFLEDRSIDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAH 317 (403)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHTTCEECCC
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 999999999999887766 8998887665533 45678889999999998773
No 437
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=90.30 E-value=0.56 Score=47.51 Aligned_cols=119 Identities=10% Similarity=0.082 Sum_probs=86.1
Q ss_pred HHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE
Q 015424 164 IGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL 243 (407)
Q Consensus 164 ~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL 243 (407)
..++++.. .....|..+.- .|. . ..+..++++.+++.|...| |+..-..+++.++.+|+. +++||.
T Consensus 216 v~avR~av--G~d~~l~vDaN-----~~~-~-~~~A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa 281 (424)
T 3v3w_A 216 FAAVRKEF--GPDIHLLHDVH-----HRL-T-PIEAARLGKALEPYHLFWM----EDAVPAENQESFKLIRQH-TTTPLA 281 (424)
T ss_dssp HHHHHHHH--CSSSEEEEECT-----TCC-C-HHHHHHHHHHHGGGCCSEE----ECCSCCSSTTHHHHHHHH-CCSCEE
T ss_pred HHHHHHHc--CCCCcEEEeCC-----CCC-C-HHHHHHHHHHHHhcCCCEE----ECCCChHhHHHHHHHHhh-CCCCEE
Confidence 45566543 12456777631 222 1 2245667888888886655 344555688899999987 899999
Q ss_pred eccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEEeC
Q 015424 244 CKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVH 296 (407)
Q Consensus 244 ~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVEVh 296 (407)
..+-+.++++..++...| +|.|.+....... .+...+...|+..|+.+++-+-
T Consensus 282 ~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 336 (424)
T 3v3w_A 282 VGEVFNSIHDCRELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTGFHGA 336 (424)
T ss_dssp ECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCC
T ss_pred EccCcCCHHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 999999999998887776 8999998887754 5677888999999999776554
No 438
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=90.28 E-value=1.2 Score=43.25 Aligned_cols=118 Identities=17% Similarity=0.193 Sum_probs=82.2
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCc--EEEEEecCCcCCCCHHHHHHHHhcCCCC
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAA--CLSILTDEKYFKGSFENLEAVRSAGVKC 240 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~--aISVLTd~~~F~Gs~edL~~Vr~a~v~l 240 (407)
...++++. .....+..+.- .|+ . ..+..++++.+++.|.. .| |+.+-..+++.++.+|+. +++
T Consensus 172 ~v~avr~~---g~~~~l~vDan-----~~~-~-~~~a~~~~~~l~~~~i~~~~i----E~P~~~~~~~~~~~l~~~-~~i 236 (345)
T 2zad_A 172 AVEEIAKV---TRGAKYIVDAN-----MGY-T-QKEAVEFARAVYQKGIDIAVY----EQPVRREDIEGLKFVRFH-SPF 236 (345)
T ss_dssp HHHHHHHH---STTCEEEEECT-----TCS-C-HHHHHHHHHHHHHTTCCCSEE----ECCSCTTCHHHHHHHHHH-SSS
T ss_pred HHHHHHhh---CCCCeEEEECC-----CCC-C-HHHHHHHHHHHHhcCCCeeee----eCCCCcccHHHHHHHHHh-CCC
Confidence 34555554 12455666542 222 1 12445678888888865 43 344556789999999986 899
Q ss_pred cEEeccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEEeC
Q 015424 241 PLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVH 296 (407)
Q Consensus 241 PVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVEVh 296 (407)
||...+-+.+++++.+....| +|.|.+-..- .. .+...+.+.|+.+|+.+++-+.
T Consensus 237 pia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i~~~A~~~g~~~~~~~~ 293 (345)
T 2zad_A 237 PVAADESARTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAIVEIAESSGLKLMIGCM 293 (345)
T ss_dssp CEEESTTCCSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHHHHHHHTTTCEEEECCS
T ss_pred CEEEeCCcCCHHHHHHHHHhCCCCEEEEeccc-ccHHHHHHHHHHHHHcCCeEEEecC
Confidence 999999999999998887666 8988886554 33 3556788889999999877654
No 439
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=90.28 E-value=0.76 Score=45.63 Aligned_cols=91 Identities=14% Similarity=0.154 Sum_probs=72.0
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCCC-HH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~ 275 (407)
+..++++.+++.|. .| -+| +- +++.+..+|+. +++||...+-+.+++++.++...| +|.|.+...... -.
T Consensus 204 ~a~~~~~~l~~~~i-~i---EqP-~~--~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit 275 (378)
T 3eez_A 204 QALRVMRATEDLHV-MF---EQP-GE--TLDDIAAIRPL-HSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLT 275 (378)
T ss_dssp HHHHHHHHTGGGTC-CE---ECC-SS--SHHHHHHTGGG-CCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHH
T ss_pred HHHHHHHHhccCCe-EE---ecC-CC--CHHHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHH
Confidence 44567777887774 33 344 33 89999999986 899999999999999998887765 899999887763 45
Q ss_pred HHHHHHHHHHHcCCcEEEEeC
Q 015424 276 DIRYMTKICKLLGLTALVEVH 296 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVEVh 296 (407)
+...+.+.|+..|+.+++-..
T Consensus 276 ~~~~ia~~A~~~g~~~~~~~~ 296 (378)
T 3eez_A 276 RAARMRDIALTHGIDMFVMAT 296 (378)
T ss_dssp HHHHHHHHHHHTTCEEEEECS
T ss_pred HHHHHHHHHHHcCCEEEcCCC
Confidence 677889999999999988654
No 440
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=90.25 E-value=9.2 Score=37.08 Aligned_cols=181 Identities=16% Similarity=0.155 Sum_probs=118.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccC----
Q 015424 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV---- 271 (407)
Q Consensus 196 ~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai---- 271 (407)
.-||+..|...+++||++|-|---+.--.=...|+..+|+. +..|+=--- -..+..+.-|...--+.|.|.-.-
T Consensus 52 ~PDpv~aA~~ae~aGAdGITvHlReDrRHI~d~Dv~~L~~~-i~t~lNlEm-a~t~emi~ial~~kP~~vtLVPEkreE~ 129 (278)
T 3gk0_A 52 YPDPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPR-VKTRMNLEC-AVTPEMLDIACEIRPHDACLVPEKRSEL 129 (278)
T ss_dssp CSCHHHHHHHHHHTTCSEEEEECCTTCSSSCHHHHHHHHHH-CSSCEEEEE-CSSHHHHHHHHHHCCSEEEECCCSGGGB
T ss_pred CCCHHHHHHHHHHcCCCEEEeccCCCcccCCHHHHHHHHHH-cCCCEEeec-CCCHHHHHHHHHcCCCEEEECCCCCCCc
Confidence 34999999999999999999943332233357899999986 666653221 246677888999999999997653
Q ss_pred --------C-CHHHHHHHHHHHHHcCCcE--EEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHH
Q 015424 272 --------L-PDLDIRYMTKICKLLGLTA--LVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTK 340 (407)
Q Consensus 272 --------L-~~~~L~~Li~~a~~LGL~a--LVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~ 340 (407)
. ..+.|..+++..+..|+.+ +++ -+.+.++.|.++ ||+.|=+-.-.|+.. +......--++...
T Consensus 130 TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFID-pd~~qI~aA~~~-GAd~IELhTG~YA~a---~~~~~~~~el~rl~ 204 (278)
T 3gk0_A 130 TTEGGLDVVGHFDAVRAACKQLADAGVRVSLFID-PDEAQIRAAHET-GAPVIELHTGRYADA---HDAAEQQREFERIA 204 (278)
T ss_dssp CSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHHHH-TCSEEEECCHHHHTC---SSHHHHHHHHHHHH
T ss_pred CCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHHHh-CcCEEEEecchhhcc---CCchhHHHHHHHHH
Confidence 1 3356888888888899966 554 689999999998 999988743333110 00000001111111
Q ss_pred HHhhcccccccccCCceEEEeeCCCCHHHHHHHHHc-CCCEEEEcccccC
Q 015424 341 KLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEA-GVKAVLVGESIVK 389 (407)
Q Consensus 341 ~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~-GadaVLVGeaLmk 389 (407)
+.+... ..-+.-|-+.-|+ +.+.+..+... +..-+=||.+|+.
T Consensus 205 ~aA~~A-----~~lGL~VnAGHGL-~y~Nv~~ia~ip~i~ElnIGHaiIa 248 (278)
T 3gk0_A 205 TGVDAG-----IALGLKVNAGHGL-HYTNVQAIAALPGIAELNIGHAIVA 248 (278)
T ss_dssp HHHHHH-----HHTTCEEEECTTC-CTTTHHHHHTCTTEEEEEECHHHHH
T ss_pred HHHHHH-----HHcCCEEecCCCC-CHHHHHHHHhCCCCeEEecCHHHHH
Confidence 111110 1236778888888 67777766543 6788888888764
No 441
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=90.24 E-value=0.52 Score=49.87 Aligned_cols=160 Identities=19% Similarity=0.181 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHcCCcEEEEEe---cCC------cCC-C-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEE
Q 015424 198 DPVEIARSYEKGGAACLSILT---DEK------YFK-G-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAV 265 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLT---d~~------~F~-G-s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaV 265 (407)
+..++|+.+++.|++.|+|-. ++. +.. + ..+.++.+|+. +++||+.-..|.++.+..++...| ||.|
T Consensus 229 ~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V 307 (671)
T 1ps9_A 229 ETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGH-VSLPLVTTNRINDPQVADDILSRGDADMV 307 (671)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTS-CSSCEEECSSCCSHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHh-cCceEEEeCCCCCHHHHHHHHHcCCCCEE
Confidence 567889999999999999852 211 111 2 25677888886 899999988889999999999998 9999
Q ss_pred EEeccCCCHHHHHHHHHHHHHcCCc--EEE--EeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHH
Q 015424 266 LLIAAVLPDLDIRYMTKICKLLGLT--ALV--EVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKK 341 (407)
Q Consensus 266 LLiaaiL~~~~L~~Li~~a~~LGL~--aLV--EVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~ 341 (407)
.+.-.++.+.++ .+.+++ |.. .-. -|.. .-......- ......+|.+-. . +..+.
T Consensus 308 ~~gR~~l~~P~l---~~k~~~-g~~~~~~~c~~c~~-~C~~~~~~~-~~~~C~~np~~~---------~--e~~~~---- 366 (671)
T 1ps9_A 308 SMARPFLADAEL---LSKAQS-GRADEINTCIGCNQ-ACLDQIFVG-KVTSCLVNPRAC---------H--ETKMP---- 366 (671)
T ss_dssp EESTHHHHCTTH---HHHHHT-TCGGGCCCCCCCCT-TTHHHHHTT-CCCCCSSCTTTT---------C--TTTSC----
T ss_pred EeCHHHHhCcHH---HHHHHc-CCCCCccccccccc-ccchhccCC-CceEEEeCcccc---------c--ccccC----
Confidence 999888866565 222322 321 111 1211 011111211 111112232211 0 11100
Q ss_pred HhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcc
Q 015424 342 LLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGE 385 (407)
Q Consensus 342 L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGe 385 (407)
..+ .. ...-++|..||.....-+..+.+.|.+-+||..
T Consensus 367 ~~~---~~---~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~ 404 (671)
T 1ps9_A 367 ILP---AV---QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDA 404 (671)
T ss_dssp CCS---CS---SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCC---CC---CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 000 00 012378888999888888899999998888865
No 442
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=90.22 E-value=0.96 Score=45.10 Aligned_cols=123 Identities=13% Similarity=0.032 Sum_probs=87.6
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....+..+.- .|+ . ..+..++++.+++.|...| |+..-..+++.+..+|+. +++||
T Consensus 202 ~v~avR~a~--G~~~~l~vDaN-----~~~-~-~~~A~~~~~~l~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPI 267 (383)
T 3toy_A 202 MIKGLRALL--GPDIALMLDFN-----QSL-D-PAEATRRIARLADYDLTWI----EEPVPQENLSGHAAVRER-SEIPI 267 (383)
T ss_dssp HHHHHHHHH--CTTSEEEEECT-----TCS-C-HHHHHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-CSSCE
T ss_pred HHHHHHHHh--CCCCeEEEeCC-----CCC-C-HHHHHHHHHHHHhhCCCEE----ECCCCcchHHHHHHHHhh-cCCCE
Confidence 345566543 12456777652 122 1 1244567888888886554 455666789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEEeCCHHHH
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHDEREM 301 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVEVht~eEl 301 (407)
...+-+.+++++..+...| +|.|.+....... .+...+.+.|+..|+.++ +|..-++
T Consensus 268 a~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~--~h~~~~a 326 (383)
T 3toy_A 268 QAGENWWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLNVAGQADAASIPMS--SHILPEA 326 (383)
T ss_dssp EECTTCCHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCCBC--CCSCHHH
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEe--ecCHHHH
Confidence 9999999999998887665 8999888887754 567788899999999976 4655444
No 443
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=90.20 E-value=9.4 Score=36.38 Aligned_cols=180 Identities=17% Similarity=0.179 Sum_probs=121.0
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEeccCC----
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL---- 272 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL---- 272 (407)
-||+..|...+++||++|-|---+.--.=...|+..+|+. ++.|+=- +.-..+..+.-|...--+.|.|.-.-.
T Consensus 25 Pdpv~aA~~ae~aGAdgITvHlReDrRHI~d~Dv~~L~~~-~~~~lNl-E~a~t~emi~ia~~~kP~~vtLVPE~r~e~T 102 (243)
T 1m5w_A 25 PDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQT-LDTRMNL-EMAVTEEMLAIAVETKPHFCCLVPEKRQEVT 102 (243)
T ss_dssp SCHHHHHHHHHTTTCSEEEEECCTTCSSSCHHHHHHHHHH-CSSEEEE-EECSSHHHHHHHHHHCCSEEEECCCCSSCSS
T ss_pred CCHHHHHHHHHHcCCCEEEeCCCCCcccCCHHHHHHHHHh-cCCCEEe-ccCCCHHHHHHHHHcCCCEEEECCCCCCCcC
Confidence 4899999999999999999975554445568899999986 6665432 222456677779999999999976521
Q ss_pred ---------CHHHHHHHHHHHHHcCCcEEEEe-CCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHH
Q 015424 273 ---------PDLDIRYMTKICKLLGLTALVEV-HDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKL 342 (407)
Q Consensus 273 ---------~~~~L~~Li~~a~~LGL~aLVEV-ht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L 342 (407)
..+.|...++..+..|+.+=+-+ -+.+.++.|.++ ||+.|=+-.-.|+.. + -+.+...+|
T Consensus 103 TegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDpd~~qi~aA~~~-GA~~IELhTG~Ya~a--------~-~~~~~~~el 172 (243)
T 1m5w_A 103 TEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEV-GAPFIEIHTGCYADA--------K-TDAEQAQEL 172 (243)
T ss_dssp CCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHT-TCSEEEEECHHHHHC--------C-SHHHHHHHH
T ss_pred CCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHh-CcCEEEEechhhhcC--------C-CchhHHHHH
Confidence 23567788888888899884444 599999999998 999998754444111 1 111111122
Q ss_pred hhcccc-cccccCCceEEEeeCCCCHHHHHHHHHc-CCCEEEEcccccC
Q 015424 343 LEGERG-EIIRQKNIIVVGESGLFTPDDIAYVQEA-GVKAVLVGESIVK 389 (407)
Q Consensus 343 ~~~~~~-~~i~~~~v~vVAESGI~t~eD~~~l~~~-GadaVLVGeaLmk 389 (407)
...... ..-..-+.-|-+.-|+ +.+.+..+... +..-+=||.+|+.
T Consensus 173 ~~i~~aa~~A~~lGL~VnAGHgL-~y~Nv~~ia~ip~i~ElnIGHaiia 220 (243)
T 1m5w_A 173 ARIAKAATFAASLGLKVNAGHGL-TYHNVKAIAAIPEMHELNIGHAIIG 220 (243)
T ss_dssp HHHHHHHHHHHHTTCEEEEESSC-CTTTHHHHHTCTTEEEEEECHHHHH
T ss_pred HHHHHHHHHHHHcCCEEecCCCC-CHHHHHHHhhCCCCeEEccCHHHHH
Confidence 111000 0011246778888888 77788877653 6778888888764
No 444
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=90.14 E-value=1.5 Score=42.93 Aligned_cols=86 Identities=19% Similarity=0.291 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhccccccccc
Q 015424 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQ 353 (407)
Q Consensus 274 ~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~ 353 (407)
.+-|+.|.++++++||.++.|++|.+.++.+.++ ++++-|-.++. .++. ...++.+
T Consensus 98 ~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~--vd~lkIgA~~~---------~n~~----LLr~va~--------- 153 (298)
T 3fs2_A 98 EKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV--VDVLQIPAFLC---------RQTD----LLIAAAR--------- 153 (298)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT--CSEEEECGGGT---------TCHH----HHHHHHH---------
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh--CCEEEECcccc---------CCHH----HHHHHHc---------
Confidence 3567889999999999999999999999998775 89999988887 5443 2333332
Q ss_pred CCceEEEeeCCC-CHHHHHH----HHHcCCCEEEE
Q 015424 354 KNIIVVGESGLF-TPDDIAY----VQEAGVKAVLV 383 (407)
Q Consensus 354 ~~v~vVAESGI~-t~eD~~~----l~~~GadaVLV 383 (407)
.+.+|+..=|.+ |++|+.. +.+.|.+-|++
T Consensus 154 ~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL 188 (298)
T 3fs2_A 154 TGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLA 188 (298)
T ss_dssp TTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEE
T ss_pred cCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEE
Confidence 367899999995 8877644 45668877776
No 445
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=90.13 E-value=0.32 Score=49.16 Aligned_cols=78 Identities=15% Similarity=0.118 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHcC------CcEEEEEecC-------C--cCC-C--CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHH
Q 015424 198 DPVEIARSYEKGG------AACLSILTDE-------K--YFK-G--SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYART 259 (407)
Q Consensus 198 dp~~iA~ay~~~G------A~aISVLTd~-------~--~F~-G--s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~ 259 (407)
+..++|+.+++.| ++.|+|..-. . ++. | ..+.+..||+. +++||+.-..| ++.+..++..
T Consensus 261 ~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~-~~iPvi~~G~i-~~~~a~~~l~ 338 (402)
T 2hsa_B 261 LGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNA-YQGTFICSGGY-TRELGIEAVA 338 (402)
T ss_dssp HHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHH-CSSCEEEESSC-CHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHH-CCCCEEEeCCC-CHHHHHHHHH
Confidence 3678899999999 9999996311 1 111 1 23456778887 89999987766 8999999998
Q ss_pred cC-CCEEEEeccCCCHHHH
Q 015424 260 KG-ADAVLLIAAVLPDLDI 277 (407)
Q Consensus 260 ~G-ADaVLLiaaiL~~~~L 277 (407)
.| ||.|.+.-.+|.+.+|
T Consensus 339 ~g~aD~V~igR~~l~dP~l 357 (402)
T 2hsa_B 339 QGDADLVSYGRLFISNPDL 357 (402)
T ss_dssp TTSCSEEEESHHHHHCTTH
T ss_pred CCCCceeeecHHHHhCchH
Confidence 88 9999998777766555
No 446
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=89.96 E-value=1.4 Score=42.57 Aligned_cols=164 Identities=13% Similarity=0.102 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCcEEEEE------------ecCCcCCC-----CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC
Q 015424 199 PVEIARSYEKGGAACLSIL------------TDEKYFKG-----SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG 261 (407)
Q Consensus 199 p~~iA~ay~~~GA~aISVL------------Td~~~F~G-----s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G 261 (407)
..++|+.+.+.||.+. +. |-+..|+| .++.+..+++. ..+|++.-= .|+.++.....+
T Consensus 31 a~~~a~~lk~~ga~~~-~~~v~k~~f~k~prts~~~~~g~~l~~gl~~l~~~~~~-~Gl~~~te~--~d~~~~~~l~~~- 105 (280)
T 2qkf_A 31 TLQTCAHYVEVTRKLG-IPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAE-FGIPVITDV--HEPHQCQPVAEV- 105 (280)
T ss_dssp HHHHHHHHHHHHHHHT-CCEEEEEESCCSSCSSSSSCCCSCHHHHHHHHHHHHHH-HCCCEEEEC--CSGGGHHHHHHH-
T ss_pred HHHHHHHHHHhhhhcc-eeEEEeeeeecCCCCChHHhhccchHHHHHHHHHHHHH-cCCcEEEec--CCHHHHHHHHhh-
Q ss_pred CCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHhcc---cCCcEEEeeccccccccccccccccccC
Q 015424 262 ADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLGI---EGIELIGINNRNLAISIFSYRTETFEVD 335 (407)
Q Consensus 262 ADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~eElerAl~l---~Ga~iIGINnRdL~~~~~~~t~~Tf~vD 335 (407)
+|.+-+.+.-+.+-+ |++.+..+|+.+++... |.+|+..|.+. .|..-+-+-.|.- .|+-....+|
T Consensus 106 ~d~~kIga~~~~n~~---ll~~~a~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~-----~~~~~~~~~d 177 (280)
T 2qkf_A 106 CDVIQLPAFLARQTD---LVVAMAKTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGS-----SFGYDNLVVD 177 (280)
T ss_dssp CSEEEECGGGTTBHH---HHHHHHHTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCE-----ECSTTCEECC
T ss_pred CCEEEECcccccCHH---HHHHHHcCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCC-----CCCCCccccC
Q ss_pred chhHHHHhhcccccccccC-CceEEE-eeCC-----------CC-----HHHHHHHHHcCCCEEEE
Q 015424 336 NSNTKKLLEGERGEIIRQK-NIIVVG-ESGL-----------FT-----PDDIAYVQEAGVKAVLV 383 (407)
Q Consensus 336 l~~t~~L~~~~~~~~i~~~-~v~vVA-ESGI-----------~t-----~eD~~~l~~~GadaVLV 383 (407)
+.....|.+. . +.+|+. .+-- .. +.-+.....+|++|++|
T Consensus 178 l~~i~~lk~~--------~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~I 235 (280)
T 2qkf_A 178 MLGFGVMKQT--------CGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFL 235 (280)
T ss_dssp TTHHHHHHHH--------TTTCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHh--------CCCCCEEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEE
No 447
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=89.94 E-value=1.4 Score=42.28 Aligned_cols=140 Identities=17% Similarity=0.110 Sum_probs=85.4
Q ss_pred CCccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCc--------EEEEEe-cCCcCCCCHHH
Q 015424 159 PARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAA--------CLSILT-DEKYFKGSFEN 229 (407)
Q Consensus 159 ~~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~--------aISVLT-d~~~F~Gs~ed 229 (407)
..+.+..+++. ....|+.-.|..|.-. ...+++...+|+. ++-+-. .-.+|+|-.+.
T Consensus 106 ~t~~~v~a~~~------~~~~~~~tRkt~p~~r--------~~~~~A~~~gG~~~hr~~l~d~vlik~~Hi~~~g~~~~a 171 (273)
T 2b7n_A 106 LTSRFVEALNS------HKVRLLDTRKTRPLLR--------IFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSF 171 (273)
T ss_dssp HHHHHHHHHCC------SSSEEECCSCCCTTCH--------HHHHHHHHTTTCCCCCSSTTTCEEECHHHHTTCSSHHHH
T ss_pred HHHHHHHHhCC------CCeEEEEcCCCChhhH--------HHHHHHHHhCCCcceEcCccceEEeeCCHHHHhCCHHHH
Confidence 34566666653 3467888888777421 1234555567765 332211 12334444677
Q ss_pred HHHHHhcCCC-CcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHh
Q 015424 230 LEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVL 305 (407)
Q Consensus 230 L~~Vr~a~v~-lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~eElerAl 305 (407)
++.+|+.... ++|.. -+-+..|+.+|..+|||.|.|.. .+.++++.+.+......-.+-+++. |++.+....
T Consensus 172 i~~~r~~~~~~~~i~v--ev~tlee~~~A~~aGaD~I~ld~--~~~~~l~~~v~~l~~~~~~~~i~AsGGI~~~ni~~~~ 247 (273)
T 2b7n_A 172 LTHARKNLPFTAKIEI--ECESFEEAKNAMNAGADIVMCDN--LSVLETKEIAAYRDAHYPFVLLEASGNISLESINAYA 247 (273)
T ss_dssp HHHHGGGSCTTCCEEE--EESSHHHHHHHHHHTCSEEEEET--CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHH
T ss_pred HHHHHHhCCCCceEEE--EcCCHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhhccCCCcEEEEECCCCHHHHHHHH
Confidence 8888875211 34432 11234688899999999999986 6777787777766542112345544 777888888
Q ss_pred cccCCcEEEeec
Q 015424 306 GIEGIELIGINN 317 (407)
Q Consensus 306 ~l~Ga~iIGINn 317 (407)
+. |++.||+-.
T Consensus 248 ~a-GaD~i~vGs 258 (273)
T 2b7n_A 248 KS-GVDAISVGA 258 (273)
T ss_dssp TT-TCSEEECTH
T ss_pred Hc-CCcEEEEcH
Confidence 86 999999953
No 448
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=89.87 E-value=0.72 Score=46.62 Aligned_cols=92 Identities=10% Similarity=0.033 Sum_probs=73.3
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCC-CcEEeccccCCHHHHHHHHHcC-CCEEEEeccCC-CH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PD 274 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~-lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL-~~ 274 (407)
+..++++.+++.|...| |+.+-..+++.++.+++. ++ +||...+-+.++.++.++...| +|.|.+-.... +-
T Consensus 244 eai~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 318 (428)
T 3bjs_A 244 DARRVLPVLAEIQAGWL----EEPFACNDFASYREVAKI-TPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGI 318 (428)
T ss_dssp HHHHHHHHHHHTTCSCE----ECCSCTTCHHHHHHHTTT-CSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCH
T ss_pred HHHHHHHHHHhcCCCEE----ECCCCccCHHHHHHHHHh-CCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCH
Confidence 45567788888887654 445556789999999986 88 9999999999999999888776 78888877766 44
Q ss_pred HHHHHHHHHHHHcCCcEEEE
Q 015424 275 LDIRYMTKICKLLGLTALVE 294 (407)
Q Consensus 275 ~~L~~Li~~a~~LGL~aLVE 294 (407)
.+...+.+.|+..|+.+++-
T Consensus 319 tea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 319 TEGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp HHHHHHHHHHHHTTCCBCCB
T ss_pred HHHHHHHHHHHHcCCeEEec
Confidence 56778999999999998766
No 449
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=89.76 E-value=0.61 Score=46.22 Aligned_cols=92 Identities=15% Similarity=0.144 Sum_probs=73.5
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHc-CCCEEEEeccCCCH-H
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK-GADAVLLIAAVLPD-L 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~-GADaVLLiaaiL~~-~ 275 (407)
+..++++.+++.|...| |+....++++.+..+|+. +++||...+-+.++++..++... ++|.|.+....... .
T Consensus 209 ~A~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit 283 (374)
T 3sjn_A 209 HSAMMAKRLEEFNLNWI----EEPVLADSLISYEKLSRQ-VSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGIT 283 (374)
T ss_dssp HHHHHHHHSGGGCCSEE----ECSSCTTCHHHHHHHHHH-CSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHH
T ss_pred HHHHHHHHhhhcCceEE----ECCCCcccHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHH
Confidence 34567788888886655 445566789999999987 89999999999999998887654 68999998888754 5
Q ss_pred HHHHHHHHHHHcCCcEEEE
Q 015424 276 DIRYMTKICKLLGLTALVE 294 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVE 294 (407)
+...+...|+.+|+.+++-
T Consensus 284 ~~~~ia~~A~~~gi~~~~h 302 (374)
T 3sjn_A 284 EMKKIYDIAQMNGTQLIPH 302 (374)
T ss_dssp HHHHHHHHHHHHTCEECCB
T ss_pred HHHHHHHHHHHcCCEEEec
Confidence 6778889999999997653
No 450
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=89.71 E-value=1 Score=45.34 Aligned_cols=117 Identities=15% Similarity=0.134 Sum_probs=83.8
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....|..+. ..|+ . ..+..++++.+++.|...| |+..-..+++.++.+|+. +++||
T Consensus 190 ~v~avR~a~--G~d~~l~vDa-----N~~~-~-~~~A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPI 255 (412)
T 4e4u_A 190 FCRRVREAV--GSKADLLFGT-----HGQM-V-PSSAIRLAKRLEKYDPLWF----EEPVPPGQEEAIAQVAKH-TSIPI 255 (412)
T ss_dssp HHHHHHHHH--TTSSEEEECC-----CSCB-C-HHHHHHHHHHHGGGCCSEE----ECCSCSSCHHHHHHHHHT-CSSCE
T ss_pred HHHHHHHHh--CCCCeEEEEC-----CCCC-C-HHHHHHHHHHhhhcCCcEE----ECCCChhhHHHHHHHHhh-CCCCE
Confidence 345566543 1235666653 1222 1 1244567888888886554 344566789999999986 89999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEE
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALV 293 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLV 293 (407)
...+-+.++++..++...| +|.|.+...... -.+...+...|+.+|+.++.
T Consensus 256 a~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~v~~ 308 (412)
T 4e4u_A 256 ATGERLTTKYEFHKLLQAGGASILQLNVARVGGLLEAKKIATLAEVHYAQIAP 308 (412)
T ss_dssp EECTTCCHHHHHHHHHHTTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCEECC
T ss_pred EecCccCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe
Confidence 9999999999998887776 899999888774 45677889999999998653
No 451
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=89.68 E-value=0.71 Score=46.24 Aligned_cols=118 Identities=11% Similarity=0.081 Sum_probs=84.6
Q ss_pred HHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE
Q 015424 164 IGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL 243 (407)
Q Consensus 164 ~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL 243 (407)
..++++.. .....|.++.- .|. . ..+..++++.+++.|...| |+..-..+++.+..+|+. +++||.
T Consensus 191 v~avR~a~--G~d~~l~vDan-----~~~-~-~~~A~~~~~~L~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPIa 256 (401)
T 3sbf_A 191 FKSLREKY--GNQFHILHDVH-----ERL-F-PNQAIQFAKEVEQYKPYFI----EDILPPNQTEWLDNIRSQ-SSVSLG 256 (401)
T ss_dssp HHHHHHHH--TTSSEEEEECT-----TCS-C-HHHHHHHHHHHGGGCCSCE----ECSSCTTCGGGHHHHHTT-CCCCEE
T ss_pred HHHHHHHc--CCCCEEEEECC-----CCC-C-HHHHHHHHHHHHhcCCCEE----ECCCChhHHHHHHHHHhh-CCCCEE
Confidence 45566543 12456776642 222 1 2245567788888886655 344556788999999986 899999
Q ss_pred eccccCCHHHHHHHHHcC-CCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEEe
Q 015424 244 CKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 244 ~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVEV 295 (407)
..+-+.++++..++...| +|.|.+...... -.+...+.+.|+.+|+.+++-+
T Consensus 257 ~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~ 310 (401)
T 3sbf_A 257 LGELFNNPEEWKSLIANRRIDFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHC 310 (401)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCC
T ss_pred eCCccCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 999999999999887765 899988877763 4567788899999999876433
No 452
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=89.68 E-value=0.99 Score=45.01 Aligned_cols=97 Identities=13% Similarity=0.060 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCC-CHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDL 275 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL-~~~ 275 (407)
+..++++.+++.|...| |+.+-..+++.++.+++. +++||...+-+.+++++.++...| +|.|.+-.... +-.
T Consensus 235 ~ai~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 309 (398)
T 2pp0_A 235 TAIRMGRKMEQFNLIWI----EEPLDAYDIEGHAQLAAA-LDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGIS 309 (398)
T ss_dssp HHHHHHHHHGGGTCSCE----ECCSCTTCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHH
T ss_pred HHHHHHHHHHHcCCcee----eCCCChhhHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHH
Confidence 45567777788887654 444556789999999987 899999999999999999887766 88888866554 345
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCHHHH
Q 015424 276 DIRYMTKICKLLGLTALVEVHDEREM 301 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVEVht~eEl 301 (407)
+...+.+.|+..|+.++ .|...+.
T Consensus 310 e~~~i~~~A~~~gi~~~--~h~~~~~ 333 (398)
T 2pp0_A 310 PFLKIMDLAAKHGRKLA--PHFAMEV 333 (398)
T ss_dssp HHHHHHHHHHHTTCEEC--CCSCHHH
T ss_pred HHHHHHHHHHHcCCeEe--ecCccHH
Confidence 67788999999999977 5654443
No 453
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=89.65 E-value=1.3 Score=44.35 Aligned_cols=119 Identities=9% Similarity=0.060 Sum_probs=87.5
Q ss_pred cHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCc
Q 015424 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP 241 (407)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lP 241 (407)
....++++... ....|.++.- |-+.. .+ .++++.+++.|...| |+..-.++++.+..+++. +++|
T Consensus 193 ~~v~avR~a~G--~~~~L~vDaN------~~w~~-~~-~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iP 257 (400)
T 3mwc_A 193 EPLQETRRAVG--DHFPLWTDAN------SSFEL-DQ-WETFKAMDAAKCLFH----EQPLHYEALLDLKELGER-IETP 257 (400)
T ss_dssp HHHHHHHHHHC--TTSCEEEECT------TCCCG-GG-HHHHHHHGGGCCSCE----ESCSCTTCHHHHHHHHHH-SSSC
T ss_pred HHHHHHHHhcC--CCCEEEEeCC------CCCCH-HH-HHHHHHHHhcCCCEE----eCCCChhhHHHHHHHHhh-CCCC
Confidence 35566766531 2356777642 22232 24 678888988886654 455667789999999987 8999
Q ss_pred EEeccccCCHHHHHHHHHcC-CCEEEEeccCC-CHHHHHHHHHHHHHcCCcEEEEe
Q 015424 242 LLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 242 VL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL-~~~~L~~Li~~a~~LGL~aLVEV 295 (407)
|...+-+.+.+++..+...| +|.|.+..... .-.+...+.+.|+..|+.+++-+
T Consensus 258 Ia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 313 (400)
T 3mwc_A 258 ICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWGGT 313 (400)
T ss_dssp EEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 99999999999998887765 79998877766 34567888999999999987654
No 454
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=89.63 E-value=0.71 Score=45.76 Aligned_cols=91 Identities=13% Similarity=0.124 Sum_probs=69.9
Q ss_pred HHHHHHHHHHc-CCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCCCH-H
Q 015424 199 PVEIARSYEKG-GAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-L 275 (407)
Q Consensus 199 p~~iA~ay~~~-GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~ 275 (407)
..++++.+++. | |..+ |+.+-..+++.++.+++. +++||...+-+.+++++.++...| +|.|.+-...... .
T Consensus 200 a~~~~~~l~~~~~---i~~i-EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 274 (382)
T 2gdq_A 200 AFKWERYFSEWTN---IGWL-EEPLPFDQPQDYAMLRSR-LSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGID 274 (382)
T ss_dssp HHTTHHHHTTCSC---EEEE-ECCSCSSCHHHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHH
T ss_pred HHHHHHHHhhccC---CeEE-ECCCCcccHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 34456666666 5 3333 444556789999999986 899999999999999998887765 8999887777644 4
Q ss_pred HHHHHHHHHHHcCCcEEEE
Q 015424 276 DIRYMTKICKLLGLTALVE 294 (407)
Q Consensus 276 ~L~~Li~~a~~LGL~aLVE 294 (407)
+...+.+.|+..|+.+++-
T Consensus 275 ~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 275 EFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp HHHHHHHHHHHHTCEECCC
T ss_pred HHHHHHHHHHHcCCEEeec
Confidence 5678889999999987765
No 455
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=89.55 E-value=1 Score=45.08 Aligned_cols=119 Identities=13% Similarity=-0.039 Sum_probs=83.9
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCC-HHHHHHHHhcCCCCc
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGS-FENLEAVRSAGVKCP 241 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs-~edL~~Vr~a~v~lP 241 (407)
...++++.. .....+..+.- |-+. ..+..++++.+++.|...| |+.+-.++ ++.+..+|+. +++|
T Consensus 188 ~v~avR~a~--g~~~~l~vDaN------~~~~-~~~A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~~l~~~-~~iP 253 (392)
T 3ddm_A 188 NALHVRELL--GAATPLMADAN------QGWD-LPRARQMAQRLGPAQLDWL----EEPLRADRPAAEWAELAQA-APMP 253 (392)
T ss_dssp HHHHHHHHH--CSSSCEEEECT------TCCC-HHHHHHHHHHHGGGCCSEE----ECCSCTTSCHHHHHHHHHH-CSSC
T ss_pred HHHHHHHhc--CCCceEEEeCC------CCCC-HHHHHHHHHHHHHhCCCEE----ECCCCccchHHHHHHHHHh-cCCC
Confidence 345565543 12345777641 1111 1244567788888886655 44566677 9999999987 8999
Q ss_pred EEeccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEEeCC
Q 015424 242 LLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHD 297 (407)
Q Consensus 242 VL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVEVht 297 (407)
|...+-+.+++++.++...| +|.|.+....... .+...+...|+.+|+.++ .|.
T Consensus 254 Ia~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~--~h~ 309 (392)
T 3ddm_A 254 LAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVARAVVAAGLRYC--PHY 309 (392)
T ss_dssp EEECTTCCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHHHHHHHTTCEEC--CEE
T ss_pred EEeCCCCCCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEE--ecC
Confidence 99999999999998887655 7888887776644 467788999999999975 454
No 456
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=89.55 E-value=1.2 Score=43.46 Aligned_cols=86 Identities=14% Similarity=0.249 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhccccccccc
Q 015424 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQ 353 (407)
Q Consensus 274 ~~~L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~ 353 (407)
.+-|+.|.++++++||.++.|++|.+.++.+.++ ++++-|-.++. .++. ...++.+
T Consensus 77 ~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~--vd~lqIgA~~~---------~n~~----LLr~va~--------- 132 (285)
T 3sz8_A 77 DEGLKIFAEVKARFGVPVITDVHEAEQAAPVAEI--ADVLQVPAFLA---------RQTD----LVVAIAK--------- 132 (285)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTT--CSEEEECGGGT---------TCHH----HHHHHHH---------
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh--CCEEEECcccc---------CCHH----HHHHHHc---------
Confidence 4568889999999999999999999999999885 89999988887 5443 3333332
Q ss_pred CCceEEEeeCCC-CHHHHH----HHHHcCCCEEEE
Q 015424 354 KNIIVVGESGLF-TPDDIA----YVQEAGVKAVLV 383 (407)
Q Consensus 354 ~~v~vVAESGI~-t~eD~~----~l~~~GadaVLV 383 (407)
.+.+|+..=|.+ |++|+. ++.+.|.+-|++
T Consensus 133 ~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L 167 (285)
T 3sz8_A 133 AGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVML 167 (285)
T ss_dssp TSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEE
T ss_pred cCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEE
Confidence 356899999996 887664 456678887777
No 457
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=89.55 E-value=3.7 Score=40.19 Aligned_cols=167 Identities=14% Similarity=0.128 Sum_probs=98.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEE-------ecCCc---CCCCHHHHHHHHhcCCCCcEEec---cccCCHHHHHHHHHcCCC
Q 015424 197 FDPVEIARSYEKGGAACLSIL-------TDEKY---FKGSFENLEAVRSAGVKCPLLCK---EFIVDAWQIYYARTKGAD 263 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVL-------Td~~~---F~Gs~edL~~Vr~a~v~lPVL~K---DFIid~~QI~eAr~~GAD 263 (407)
.+-.++++.+.+.|+..|=+= .++.| -.+.++.++.+++...+.|+..- .. -....+..|.++|+|
T Consensus 30 e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~-~~~~~i~~a~~aGvd 108 (345)
T 1nvm_A 30 DDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGI-GSVHDLKNAYQAGAR 108 (345)
T ss_dssp HHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTT-BCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCc-ccHHHHHHHHhCCcC
Confidence 356778888999999888772 12211 12356667777754235555422 21 135578889999999
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHcCCcEEEEe-----CCHHHH----HHHhcccCCcEEEeecccccccccccccccccc
Q 015424 264 AVLLIAAVLPDLDIRYMTKICKLLGLTALVEV-----HDEREM----DRVLGIEGIELIGINNRNLAISIFSYRTETFEV 334 (407)
Q Consensus 264 aVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEV-----ht~eEl----erAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~v 334 (407)
.|.+-...=.-+...++++++++.|+++..-+ .+.+.+ +.+.++ |++.|.+. |- +-..
T Consensus 109 ~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~-Ga~~i~l~--DT----------~G~~ 175 (345)
T 1nvm_A 109 VVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESY-GATCIYMA--DS----------GGAM 175 (345)
T ss_dssp EEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHH-TCSEEEEE--CT----------TCCC
T ss_pred EEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHC-CCCEEEEC--CC----------cCcc
Confidence 99886444333578889999999999986665 244443 334444 88888774 22 1111
Q ss_pred CchhHHHHhhcccccccccCCceEEEe-----eCCCCHHHHHHHHHcCCCEE
Q 015424 335 DNSNTKKLLEGERGEIIRQKNIIVVGE-----SGLFTPDDIAYVQEAGVKAV 381 (407)
Q Consensus 335 Dl~~t~~L~~~~~~~~i~~~~v~vVAE-----SGI~t~eD~~~l~~~GadaV 381 (407)
.++...++++.++.. + ++++++ +- .|. .........++||+.|
T Consensus 176 ~P~~v~~lv~~l~~~-~-~~~~pi-~~H~Hn~~G~-avAn~laA~~aGa~~v 223 (345)
T 1nvm_A 176 SMNDIRDRMRAFKAV-L-KPETQV-GMHAHHNLSL-GVANSIVAVEEGCDRV 223 (345)
T ss_dssp CHHHHHHHHHHHHHH-S-CTTSEE-EEECBCTTSC-HHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHHHHh-c-CCCceE-EEEECCCccH-HHHHHHHHHHcCCCEE
Confidence 244555555543321 2 123333 32 255 3344556677898654
No 458
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=89.54 E-value=1.4 Score=43.15 Aligned_cols=134 Identities=22% Similarity=0.267 Sum_probs=77.8
Q ss_pred CccHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEE------EEe-cC-CcCCCCH-HHH
Q 015424 160 ARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLS------ILT-DE-KYFKGSF-ENL 230 (407)
Q Consensus 160 ~~~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aIS------VLT-d~-~~F~Gs~-edL 230 (407)
.+.|.++++. ....|+.-.|..|--. +.+ -.+..-||+..-+ |+- |. -.+.|+. +-+
T Consensus 135 t~~~v~a~~g------~~~~i~~TRKt~Pglr-------~l~-kyAv~~GGg~nHR~gL~d~vlikdNHi~~~G~i~~Av 200 (298)
T 3gnn_A 135 TRQYVDRIAD------TRARILDTRKTLPGLR-------LAQ-KYAVRVGGGANQRLALYAGILIKENHIAAAGGVGEAL 200 (298)
T ss_dssp HHHHHHHTTT------SSCCEECCSCCCTTCH-------HHH-HHHHHHTTCCCC-------------------CHHHHH
T ss_pred HHHHHHHhCC------CCeEEEEecCCCcchH-------HHH-HhhHHhcCccceecCCCcEEEEeHHHHHHcCCHHHHH
Confidence 4556666542 2456777777777421 111 2222345553222 111 11 1244554 445
Q ss_pred HHHHhcCCCCc--EEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHh
Q 015424 231 EAVRSAGVKCP--LLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVL 305 (407)
Q Consensus 231 ~~Vr~a~v~lP--VL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~eElerAl 305 (407)
+.+|+.....| |++.. ..|+.+|..+|||.|+|.- .+.+++++.++.. .=.+.+|++ |++.+....
T Consensus 201 ~~~r~~~p~~~ieVEvdt----lde~~eAl~aGaD~I~LDn--~~~~~l~~av~~i---~~~v~ieaSGGI~~~~i~~~a 271 (298)
T 3gnn_A 201 DAAFALNAEVPVQIEVET----LDQLRTALAHGARSVLLDN--FTLDMMRDAVRVT---EGRAVLEVSGGVNFDTVRAIA 271 (298)
T ss_dssp HHHHHHC--CCCEEEESS----HHHHHHHHHTTCEEEEEES--CCHHHHHHHHHHH---TTSEEEEEESSCSTTTHHHHH
T ss_pred HHHHHhCCCCCEEEEeCC----HHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHh---CCCCeEEEEcCCCHHHHHHHH
Confidence 66665422344 34544 3589999999999999976 5666776666654 446888887 788888878
Q ss_pred cccCCcEEEeec
Q 015424 306 GIEGIELIGINN 317 (407)
Q Consensus 306 ~l~Ga~iIGINn 317 (407)
+. |+|+|++..
T Consensus 272 ~t-GVD~isvG~ 282 (298)
T 3gnn_A 272 ET-GVDRISIGA 282 (298)
T ss_dssp HT-TCSEEECGG
T ss_pred Hc-CCCEEEECC
Confidence 86 999999954
No 459
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=89.49 E-value=15 Score=35.07 Aligned_cols=162 Identities=15% Similarity=0.148 Sum_probs=96.9
Q ss_pred HHHHHHHHHcCCcEEEEEe-cCCcCCCCHH-HHHHH---Hhc-CCCCcEEeccccCCHH----HHHHHHHcCCCEEEEec
Q 015424 200 VEIARSYEKGGAACLSILT-DEKYFKGSFE-NLEAV---RSA-GVKCPLLCKEFIVDAW----QIYYARTKGADAVLLIA 269 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLT-d~~~F~Gs~e-dL~~V---r~a-~v~lPVL~KDFIid~~----QI~eAr~~GADaVLLia 269 (407)
.++++.+.+.|+++|-++. -..++.=|.+ ..+.+ ++. ...+||+..=.-.+.. +...|..+|||+|++..
T Consensus 27 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 106 (294)
T 3b4u_A 27 IAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAP 106 (294)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcC
Confidence 4556677899999999872 2222222333 22222 332 1368999664444443 23446788999999987
Q ss_pred cC----CCHHHHHH-HHHHHHHc---CCcEEE-Ee-------CCHHHHHHHh-cccCCc-EEEeeccccccccccccccc
Q 015424 270 AV----LPDLDIRY-MTKICKLL---GLTALV-EV-------HDEREMDRVL-GIEGIE-LIGINNRNLAISIFSYRTET 331 (407)
Q Consensus 270 ai----L~~~~L~~-Li~~a~~L---GL~aLV-EV-------ht~eElerAl-~l~Ga~-iIGINnRdL~~~~~~~t~~T 331 (407)
-. .+++.+.. +-..+... ++.+++ .+ =+.+.+.+.. +. .. ++|| ++
T Consensus 107 P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~--pn~ivgi--------------Kd 170 (294)
T 3b4u_A 107 PSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAF--PGIVTGV--------------KD 170 (294)
T ss_dssp CCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHC--TTTEEEE--------------EE
T ss_pred CcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHhC--CCcEEEE--------------EE
Confidence 64 35555544 44556667 887765 21 1455565655 44 46 9999 44
Q ss_pred cccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEccccc
Q 015424 332 FEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIV 388 (407)
Q Consensus 332 f~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLm 388 (407)
-.-|+....+++... + ++.+ -+|- -+.+.....+|++|++-|.+=+
T Consensus 171 s~gd~~~~~~~~~~~------~-~f~v--~~G~--d~~~l~~l~~G~~G~is~~~n~ 216 (294)
T 3b4u_A 171 SSGNWSHTERLLKEH------G-DLAI--LIGD--ERDLARGVRLGGQGAISGVANF 216 (294)
T ss_dssp CCCCHHHHHHHHHHH------T-TSEE--EECC--HHHHHHHHHTTCCEEEESGGGT
T ss_pred CCCCHHHHHHHHHhC------C-CeEE--EEcc--HHHHHHHHHCCCCEEEeCHHHh
Confidence 455777777776541 2 4333 3443 2334556679999999886644
No 460
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=89.46 E-value=0.93 Score=44.86 Aligned_cols=117 Identities=7% Similarity=-0.036 Sum_probs=81.5
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....+..+.- |-+. ..+..++++.+++.| +..+-+ .+-..+++.+..+|+. +++||
T Consensus 186 ~v~avR~~~--g~~~~l~vDan------~~~~-~~~a~~~~~~l~~~~---i~~iEq-P~~~~d~~~~~~l~~~-~~iPI 251 (372)
T 3tj4_A 186 RLTAVRERV--DSAVRIAIDGN------GKWD-LPTCQRFCAAAKDLD---IYWFEE-PLWYDDVTSHARLARN-TSIPI 251 (372)
T ss_dssp HHHHHHHHS--CTTCEEEEECT------TCCC-HHHHHHHHHHTTTSC---EEEEES-CSCTTCHHHHHHHHHH-CSSCE
T ss_pred HHHHHHHHc--CCCCcEEeeCC------CCCC-HHHHHHHHHHHhhcC---CCEEEC-CCCchhHHHHHHHHhh-cCCCE
Confidence 455666543 12356777641 1111 113345566666665 444444 4556789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEE
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALV 293 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLV 293 (407)
...+-+.+++++.++...| +|.|.+....... .+...+...|+..|+.+++
T Consensus 252 a~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~ 304 (372)
T 3tj4_A 252 ALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVP 304 (372)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCCBCC
T ss_pred EeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe
Confidence 9999999999998887765 7998888877754 5677888999999998764
No 461
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=89.41 E-value=0.28 Score=49.03 Aligned_cols=76 Identities=18% Similarity=0.101 Sum_probs=58.4
Q ss_pred HHHHHHHHHHcCCcEEEEEecCCcCC-----CCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCC
Q 015424 199 PVEIARSYEKGGAACLSILTDEKYFK-----GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL 272 (407)
Q Consensus 199 p~~iA~ay~~~GA~aISVLTd~~~F~-----Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL 272 (407)
..++|+.+++.|++.|+|-. ..+.. ...+.+..+|+. +++||+.-..| ++.+..++...| ||.|.+.-.+|
T Consensus 258 ~~~la~~le~~Gvd~i~v~~-~~~~~~~~~~~~~~~~~~vr~~-~~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l 334 (376)
T 1icp_A 258 GLYMVESLNKYDLAYCHVVE-PRMKTAWEKIECTESLVPMRKA-YKGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFI 334 (376)
T ss_dssp HHHHHHHHGGGCCSEEEEEC-CSCCC------CCCCSHHHHHH-CCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcC-CcccCCCCccccHHHHHHHHHH-cCCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHH
Confidence 57889999999999999963 21111 123456788887 89999977766 899999998887 99999988777
Q ss_pred CHHHH
Q 015424 273 PDLDI 277 (407)
Q Consensus 273 ~~~~L 277 (407)
.+.+|
T Consensus 335 ~~P~l 339 (376)
T 1icp_A 335 SNPDL 339 (376)
T ss_dssp HCTTH
T ss_pred hCccH
Confidence 65555
No 462
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=89.32 E-value=1.4 Score=42.96 Aligned_cols=94 Identities=14% Similarity=0.047 Sum_probs=62.1
Q ss_pred ceEEEEecccCCCcCCCCCCCCHH---HHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccC-CH-
Q 015424 177 PALIAEVKKASPSRGILREDFDPV---EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIV-DA- 251 (407)
Q Consensus 177 ~~vIAEvKraSPSkG~i~~~~dp~---~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIi-d~- 251 (407)
+.+|+|. |-.+.+ ..|+. ..|+...+.||+-|-+- |.+ +.++.+++. +.+||++-..+- ++
T Consensus 172 lpvIie~----~~G~~~--~~d~e~i~~aariA~elGAD~VKt~-----~t~--e~~~~vv~~-~~vPVv~~GG~~~~~~ 237 (295)
T 3glc_A 172 MPTMAVT----GVGKDM--VRDQRYFSLATRIAAEMGAQIIKTY-----YVE--KGFERIVAG-CPVPIVIAGGKKLPER 237 (295)
T ss_dssp CCEEEEE----CC------CCSHHHHHHHHHHHHHTTCSEEEEE-----CCT--TTHHHHHHT-CSSCEEEECCSCCCHH
T ss_pred CEEEEEC----CCCCcc--CCCHHHHHHHHHHHHHhCCCEEEeC-----CCH--HHHHHHHHh-CCCcEEEEECCCCCHH
Confidence 5688896 221122 23444 35677789999987763 223 467788875 789999877765 44
Q ss_pred ---HHHHHHHHcCCCEEEEeccCCCHHHHHHHHHHH
Q 015424 252 ---WQIYYARTKGADAVLLIAAVLPDLDIRYMTKIC 284 (407)
Q Consensus 252 ---~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~a 284 (407)
.++++|..+||+++..+-.++..++-..+++..
T Consensus 238 ~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~~~al 273 (295)
T 3glc_A 238 EALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAV 273 (295)
T ss_dssp HHHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHHHHHH
Confidence 267788899999999999888443334444433
No 463
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=89.31 E-value=0.96 Score=43.80 Aligned_cols=193 Identities=15% Similarity=0.114 Sum_probs=108.5
Q ss_pred CceEEEEecccCCCcCCCCCCCCHHHHHHHHHHc---CCcEEEEEecCCcCCCCHHHHHHHHhc--CCCCcEEecc----
Q 015424 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKG---GAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLCKE---- 246 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~---GA~aISVLTd~~~F~Gs~edL~~Vr~a--~v~lPVL~KD---- 246 (407)
++-|++..|=. .+. .+..++++.+... ....+-|+.-|. +-+|..+++. +.++.|=..|
T Consensus 27 k~~i~gNWKMn-~t~------~~~~~l~~~l~~~~~~~~~~veVvV~PP-----~~~L~~v~~~~~~~~i~vgAQN~~~~ 94 (272)
T 4g1k_A 27 IKRVIGNWKMH-GRL------SGNQALLTEVAQGAQAVHDNVAIGVCVP-----FPYLAQAQAQLQGGRVSWGSQDVSAH 94 (272)
T ss_dssp CEEEEEECCBC-CCH------HHHHHHHHHHHHHHTTSCTTEEEEEECC-----GGGHHHHHHHHTTSSEEEEESCCCSS
T ss_pred CCEEEEEhhhC-cCH------HHHHHHHHHHHhccccccCCceEEEeCC-----HHHHHHHHHHhcCCCceEEecccCCC
Confidence 35567776643 221 1345566665542 112345544454 5678777653 1345555555
Q ss_pred ----c--cCCHHHHHHHHHcCCCEEEEecc----CC--CHHHHHHHHHHHHHcCCcEEEEeC-CHHH-------------
Q 015424 247 ----F--IVDAWQIYYARTKGADAVLLIAA----VL--PDLDIRYMTKICKLLGLTALVEVH-DERE------------- 300 (407)
Q Consensus 247 ----F--Iid~~QI~eAr~~GADaVLLiaa----iL--~~~~L~~Li~~a~~LGL~aLVEVh-t~eE------------- 300 (407)
| =+.+.++ +++||+.|+|+.+ .+ +++.+..=++.|.+.||.++++|- +++|
T Consensus 95 ~~GAfTGEISa~ML---kd~G~~~VIiGHSERR~~fgEtde~V~~K~~~Al~~GL~pIlCVGEtleeReag~t~~vv~~Q 171 (272)
T 4g1k_A 95 EQGAYTGEVAAGMV---AEFGAAYAIVGHSERRAYHGESNETVAAKARRALAAGLTPIVCVGETLAEREAGTTEQVVGAQ 171 (272)
T ss_dssp SSBSCTTCCCHHHH---HTTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHH
T ss_pred CCCCCcCcCCHHHH---HHcCCCEEEECchhcccccCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHhCCCHHHHHHHH
Confidence 1 1555555 5679999999998 33 455555556888899999999997 4333
Q ss_pred HHHHhcccC-----CcEEEeeccccccccccccccccccCchhHHHHhhcccc---cccccCCceEEEeeCCCCHHHHHH
Q 015424 301 MDRVLGIEG-----IELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERG---EIIRQKNIIVVGESGLFTPDDIAY 372 (407)
Q Consensus 301 lerAl~l~G-----a~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~---~~i~~~~v~vVAESGI~t~eD~~~ 372 (407)
++.++..-+ --+|....-=-||||.. .+.+...+.-..+|. ..+ ...+.++-.|.+ +++++..
T Consensus 172 l~~~l~~~~~~~~~~vVIAYEPVWAIGTG~t-------At~e~aqevh~~IR~~l~~~~-a~~~rIlYGGSV-~~~N~~e 242 (272)
T 4g1k_A 172 LDAVLAVLSPDEAARIVVAYEPVWAIGTGKS-------ATAEQAQQVHAFLRGRLAAKG-AGHVSLLYGGSV-KADNAAE 242 (272)
T ss_dssp HHHHHTTSCHHHHTTCEEEECCGGGSSSSCC-------CCHHHHHHHHHHHHHHHHHHT-CTTSCEEECSCC-CTTTHHH
T ss_pred HHHHHhCCCHHHcCCEEEEECcHhhccCCCC-------CCHHHHHHHHHHHHHHHHHhh-cCCceEEEcCCc-CHhHHHH
Confidence 222332101 12566554433333321 122333332222221 111 235566666666 8888888
Q ss_pred HHHc-CCCEEEEcccccCCCC
Q 015424 373 VQEA-GVKAVLVGESIVKQDD 392 (407)
Q Consensus 373 l~~~-GadaVLVGeaLmk~~d 392 (407)
+... .+||+|||.+=.++++
T Consensus 243 l~~~~dIDG~LVGgASL~~~~ 263 (272)
T 4g1k_A 243 LFGQPDIDGGLIGGASLKSGD 263 (272)
T ss_dssp HHTSTTCCEEEECGGGGSHHH
T ss_pred HhcCCCCCEEEechHhcCHHH
Confidence 8765 8999999999877543
No 464
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=89.27 E-value=5.6 Score=32.79 Aligned_cols=98 Identities=18% Similarity=0.166 Sum_probs=62.8
Q ss_pred HHHHHHHHHHcCCcEEEEeCCHHHHHHHhccc--CCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccC
Q 015424 277 IRYMTKICKLLGLTALVEVHDEREMDRVLGIE--GIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQK 354 (407)
Q Consensus 277 L~~Li~~a~~LGL~aLVEVht~eElerAl~l~--Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~ 354 (407)
...+.+..++.|..+...+.+.+|+...+.-. .+++|=+.. ++ .+. -.++...+|.+. ..
T Consensus 49 ~~~l~~~L~~~g~~v~~~~~~~~~al~~l~~~~~~~dliilD~-~l---------~~~-~g~~~~~~lr~~-------~~ 110 (157)
T 3hzh_A 49 VKQLTQIFTSEGFNIIDTAADGEEAVIKYKNHYPNIDIVTLXI-TM---------PKM-DGITCLSNIMEF-------DK 110 (157)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGCCEEEECS-SC---------SSS-CHHHHHHHHHHH-------CT
T ss_pred HHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCCCCCEEEEec-cC---------CCc-cHHHHHHHHHhh-------CC
Confidence 34455556678998866899999998777643 456666532 12 110 012333344332 13
Q ss_pred CceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHH
Q 015424 355 NIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGI 397 (407)
Q Consensus 355 ~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i 397 (407)
.+.+|.-++-.+.+.+..+.++|++++|. |+-++....
T Consensus 111 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-----KP~~~~~l~ 148 (157)
T 3hzh_A 111 NARVIMISALGKEQLVKDCLIKGAKTFIV-----KPLDRAKVL 148 (157)
T ss_dssp TCCEEEEESCCCHHHHHHHHHTTCSEEEE-----SSCCHHHHH
T ss_pred CCcEEEEeccCcHHHHHHHHHcCCCEEEe-----CCCCHHHHH
Confidence 56788889999999999999999999854 555554433
No 465
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=89.22 E-value=0.67 Score=46.95 Aligned_cols=100 Identities=14% Similarity=0.079 Sum_probs=58.5
Q ss_pred HHHHHHHHHHcC--CcEEEEeCCH-HHHHHHhcc--c--CCcEEEeeccccccccccccccccccCchhHH-HHhhcccc
Q 015424 277 IRYMTKICKLLG--LTALVEVHDE-REMDRVLGI--E--GIELIGINNRNLAISIFSYRTETFEVDNSNTK-KLLEGERG 348 (407)
Q Consensus 277 L~~Li~~a~~LG--L~aLVEVht~-eElerAl~l--~--Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~-~L~~~~~~ 348 (407)
.+.+....+.++ ....+||.|. .+++.|++. . +++.|-+-|-+. . .=|+.... ++.+.+..
T Consensus 197 ~~A~~~~~~~~p~~~~~~vlvDT~d~~~~~al~~a~~l~~~d~IrlDs~~~---------~--~gd~~~~v~~v~~~ld~ 265 (398)
T 2i1o_A 197 EEAWKLTLENTKNGQKSVLLIDTYMDEKFAAIKIAEMFDKVDYIRLDTPSS---------R--RGNFEALIREVRWELAL 265 (398)
T ss_dssp HHHHHHHHHTCCTTSCCEEECCSSSCHHHHHHHHHTTCSCCCEEEECCCGG---------G--CSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCchHHHHHHHHHHHhhcCCcEEEeCCCCC---------C--cccHHHHHHHHHHHHHh
Confidence 344555555554 3467777775 344444442 2 677777755211 0 01222211 12111100
Q ss_pred cccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCC
Q 015424 349 EIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQ 390 (407)
Q Consensus 349 ~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~ 390 (407)
..+ +.+.+++.||| +.+.+..+.+.|+|.+-||+.+...
T Consensus 266 ~G~--~~~~I~aSggl-~~~~i~~l~~~GvD~~gvGt~l~~~ 304 (398)
T 2i1o_A 266 RGR--SDIKIMVSGGL-DENTVKKLREAGAEAFGVGTSISSA 304 (398)
T ss_dssp TTC--TTSEEEEESSC-CHHHHHHHHHTTCCEEEECHHHHTC
T ss_pred CCC--CceEEEEeCCC-CHHHHHHHHHcCCCEEEeCcccCCC
Confidence 012 24789999999 8999999999999999999988754
No 466
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=89.18 E-value=0.49 Score=43.00 Aligned_cols=100 Identities=10% Similarity=-0.028 Sum_probs=66.2
Q ss_pred HHHHHHHHcCCCEEEEeccCCCHHHHHHHHHH-HHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeecccccccccccccc
Q 015424 252 WQIYYARTKGADAVLLIAAVLPDLDIRYMTKI-CKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTE 330 (407)
Q Consensus 252 ~QI~eAr~~GADaVLLiaaiL~~~~L~~Li~~-a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~ 330 (407)
.++.++...|++.|-|...-++.+++.++++. ++.+|...++. +.++.|..+ |++.|-++..|+ .
T Consensus 17 ~~~~~a~~~Gv~~v~lr~k~~~~~~~~~~i~~l~~~~~~~livn----d~~~~A~~~-gadgvhl~~~~~---------~ 82 (210)
T 3ceu_A 17 KIITALFEEGLDILHLRKPETPAMYSERLLTLIPEKYHRRIVTH----EHFYLKEEF-NLMGIHLNARNP---------S 82 (210)
T ss_dssp HHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCGGGGGGEEES----SCTTHHHHT-TCSEEECCSSSC---------S
T ss_pred HHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHHhCCeEEEe----CCHHHHHHc-CCCEEEECcccc---------c
Confidence 34666788999999998777777666555433 44568777773 344667776 888887765554 1
Q ss_pred ccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccc
Q 015424 331 TFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESI 387 (407)
Q Consensus 331 Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaL 387 (407)
.. .. .+.+ ..-+++|++++..+. +|+|.+.+|--+
T Consensus 83 ~~-----------~~--------~~~~--ig~s~~t~~e~~~A~-~GaDyv~~g~vf 117 (210)
T 3ceu_A 83 EP-----------HD--------YAGH--VSCSCHSVEEVKNRK-HFYDYVFMSPIY 117 (210)
T ss_dssp CC-----------TT--------CCSE--EEEEECSHHHHHTTG-GGSSEEEECCCC
T ss_pred cc-----------cc--------cCCE--EEEecCCHHHHHHHh-hCCCEEEECCcC
Confidence 10 00 1212 233468999998887 999999988643
No 467
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=88.98 E-value=4.2 Score=40.16 Aligned_cols=175 Identities=13% Similarity=0.131 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHH-HHhcC-CC---CcEEeccccCCHHHHHHHHHcCCCEEEEeccCC
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEA-VRSAG-VK---CPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~-Vr~a~-v~---lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL 272 (407)
+|. .++.....|+++|-+-.|.. -.+.+.+.. ++... .. .|++.+=.-.++.+|..+..+|+++|++ -.+-
T Consensus 52 ~p~-~~e~a~~~GaD~vilDlEha--~~~~e~~~~~l~a~~~~~~~~~~~~VRv~~~~~~di~~~LdaGa~gIml-P~V~ 127 (339)
T 1izc_A 52 STF-VTKVLAATKPDFVWIDVEHG--MFNRLELHDAIHAAQHHSEGRSLVIVRVPKHDEVSLSTALDAGAAGIVI-PHVE 127 (339)
T ss_dssp CHH-HHHHHHHTCCSEEEEETTTS--CCCHHHHHHHHHHHHHHTTTCSEEEEECCTTCHHHHHHHHHHTCSEEEE-TTCC
T ss_pred CHH-HHHHHHhCCCCEEEEECCCC--CCcHHHHHHHHHHhhhcCCCCCeEEEEeCCCCHHHHHHHHhCCCCEEEe-CCCC
Confidence 444 44455667999876644432 224443322 22110 12 5555433336889999999999999766 6677
Q ss_pred CHHHHHHHHHHHHH--------------cC--------------------CcEEEEeCCHHHH---HHHhcccCCcEEEe
Q 015424 273 PDLDIRYMTKICKL--------------LG--------------------LTALVEVHDEREM---DRVLGIEGIELIGI 315 (407)
Q Consensus 273 ~~~~L~~Li~~a~~--------------LG--------------------L~aLVEVht~eEl---erAl~l~Ga~iIGI 315 (407)
+.++++.+.+.++. +| +.+++-+-|.+-+ +..+..++.+.+-|
T Consensus 128 saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt~~av~nldeIaa~~~vD~l~i 207 (339)
T 1izc_A 128 TVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESVKGVENVDAIAAMPEIHGLMF 207 (339)
T ss_dssp CHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECSHHHHHTHHHHHTCTTCCCEEE
T ss_pred CHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEChHHHHHHHHHHhcCCCCCEEEE
Confidence 88889888887753 12 1233333443333 22233346777777
Q ss_pred ecccccccc-------ccccccccccCchhH-HHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEccc
Q 015424 316 NNRNLAISI-------FSYRTETFEVDNSNT-KKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGES 386 (407)
Q Consensus 316 NnRdL~~~~-------~~~t~~Tf~vDl~~t-~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGea 386 (407)
-.-||.... .++.. .+.+... .+++...+ ..++.+ ..-..+++++..+...|++++.++..
T Consensus 208 G~~DLs~~~~~~~~~~lG~~~---~p~v~~a~~~iv~aar-----aaGk~~--g~~~~d~~~a~~~~~~Gf~~l~~~~d 276 (339)
T 1izc_A 208 GPGDYMIDAGLDLNGALSGVP---HPTFVEAMTKFSTAAQ-----RNGVPI--FGGALSVDMVPSLIEQGYRAIAVQFD 276 (339)
T ss_dssp CHHHHHHHTTCCTTCCTTSCC---CHHHHHHHHHHHHHHH-----HTTCCE--EEECSSGGGHHHHHHTTEEEEEEEEH
T ss_pred CHHHHHhhhhcccchhhCCCC---CHHHHHHHHHHHHHHH-----HhCCce--eEecCCHHHHHHHHHhCCCEEEecHH
Confidence 666884431 12221 1111111 12222211 124443 22236889999999999999888863
No 468
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=88.96 E-value=1 Score=45.05 Aligned_cols=123 Identities=17% Similarity=0.190 Sum_probs=86.6
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....+..+.- .|+ . ..+..++++.+++.|...| |+..-.++++.+..+|+. +++||
T Consensus 208 ~v~avR~a~--G~~~~l~vDaN-----~~~-~-~~~A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 273 (390)
T 3ugv_A 208 TAEAVWDAV--GRDTALMVDFN-----QGL-D-MAEAMHRTRQIDDLGLEWI----EEPVVYDNFDGYAQLRHD-LKTPL 273 (390)
T ss_dssp HHHHHHHHH--CTTSEEEEECT-----TCC-C-HHHHHHHHHHHTTSCCSEE----ECCSCTTCHHHHHHHHHH-CSSCE
T ss_pred HHHHHHHHh--CCCCEEEEECC-----CCC-C-HHHHHHHHHHHHhhCCCEE----ECCCCcccHHHHHHHHHh-cCCCE
Confidence 345666543 12456777642 121 1 1234567778888776554 455666789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEEeCCHHHH
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHDEREM 301 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVEVht~eEl 301 (407)
...+-+.+++++.++...| +|.|.+....... .+...+...|+..|+.++ +|+.-++
T Consensus 274 a~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~--~h~~~~a 332 (390)
T 3ugv_A 274 MIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGWMRAAGVAGAWGIPMS--THLYPEV 332 (390)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHHHTCCBC--CBSCHHH
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEe--ecCHHHH
Confidence 9999999999998887775 7988887776643 456778889999999976 4555444
No 469
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=88.95 E-value=0.53 Score=47.67 Aligned_cols=119 Identities=9% Similarity=0.095 Sum_probs=86.0
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....|.++. ..|. . ..+..++++.+++.|...| |+..-..+++.++.+|+. +++||
T Consensus 216 ~v~avR~a~--G~d~~l~vDa-----N~~~-~-~~~A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 281 (425)
T 3vcn_A 216 LFERAREVL--GWDVHLLHDV-----HHRL-T-PIEAARLGKDLEPYRLFWL----EDSVPAENQAGFRLIRQH-TTTPL 281 (425)
T ss_dssp HHHHHHHHH--CSSSEEEEEC-----TTCC-C-HHHHHHHHHHHGGGCCSEE----ECCSCCSSTTHHHHHHHH-CCSCE
T ss_pred HHHHHHHHc--CCCCEEEEEC-----CCCC-C-HHHHHHHHHHHHhcCCCEE----ECCCChhhHHHHHHHHhc-CCCCE
Confidence 356666653 1245677654 1222 1 2245567888888886655 344555688899999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEEe
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVEV 295 (407)
...+-+.++++..++...| +|.|.+....... .+...+...|+..|+.+++-+
T Consensus 282 a~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 336 (425)
T 3vcn_A 282 AVGEIFAHVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAAFADLHHVKTGCHG 336 (425)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHGGGTCEECCCC
T ss_pred EeCCCcCCHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHHHHHHcCCEEeecc
Confidence 9999999999998887776 8999998887754 567778889999999876544
No 470
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=88.93 E-value=1.4 Score=43.67 Aligned_cols=119 Identities=11% Similarity=0.077 Sum_probs=84.9
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++... ....+..+.- |-+. ..+..++++.+++.|...| |+.+-..+++.+..+|+. +++||
T Consensus 183 ~v~avR~a~g--~~~~l~vDaN------~~~~-~~~A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~ipI 248 (382)
T 3dgb_A 183 HVIAIKKALG--DSASVRVDVN------QAWD-EAVALRACRILGGNGIDLI----EQPISRNNRAGMVRLNAS-SPAPI 248 (382)
T ss_dssp HHHHHHHHHG--GGSEEEEECT------TCBC-HHHHHHHHHHHHTTTCCCE----ECCBCTTCHHHHHHHHHH-CSSCE
T ss_pred HHHHHHHHcC--CCCeEEEeCC------CCCC-HHHHHHHHHHHhhcCcCee----eCCCCccCHHHHHHHHHh-CCCCE
Confidence 3455665431 1356777642 1122 1245567888888885544 455667789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHc-CCCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEEe
Q 015424 243 LCKEFIVDAWQIYYARTK-GADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~-GADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVEV 295 (407)
...+-+.+.+++.++... ++|.|.+...... -.+...+.+.|+.+|+.+++-+
T Consensus 249 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 303 (382)
T 3dgb_A 249 MADESIECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGGT 303 (382)
T ss_dssp EESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 999999999999887665 5899988876653 4567788899999999987654
No 471
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=88.76 E-value=0.6 Score=42.85 Aligned_cols=75 Identities=16% Similarity=0.163 Sum_probs=53.4
Q ss_pred HHHHHHHHc--CCcEEEEEecCCcCCC------CHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCCCEEEEeccC
Q 015424 201 EIARSYEKG--GAACLSILTDEKYFKG------SFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (407)
Q Consensus 201 ~iA~ay~~~--GA~aISVLTd~~~F~G------s~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (407)
+..+.|... |++.+-+.+-..-|+| .++.++.+|+. + ++||..-. .+.+..+.++..+|||.+..+.++
T Consensus 127 e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~-~~~~pi~v~G-GI~~~ni~~~~~aGaD~vvvGsai 204 (228)
T 1h1y_A 127 EEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKK-YPSLDIEVDG-GLGPSTIDVAASAGANCIVAGSSI 204 (228)
T ss_dssp GGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHH-CTTSEEEEES-SCSTTTHHHHHHHTCCEEEESHHH
T ss_pred HHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHh-cCCCCEEEEC-CcCHHHHHHHHHcCCCEEEECHHH
Confidence 345667665 8898888764433444 35778888876 5 78876544 466678988889999999999998
Q ss_pred CCHHHH
Q 015424 272 LPDLDI 277 (407)
Q Consensus 272 L~~~~L 277 (407)
...++.
T Consensus 205 ~~~~d~ 210 (228)
T 1h1y_A 205 FGAAEP 210 (228)
T ss_dssp HTSSCH
T ss_pred HCCCCH
Confidence 854333
No 472
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=88.70 E-value=1.6 Score=43.30 Aligned_cols=119 Identities=12% Similarity=0.109 Sum_probs=84.9
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....+..+.-. | +. ..+..++++.+++.|...| |+..-..+++.+..+|+. +++||
T Consensus 182 ~v~avR~a~--g~~~~l~vDaN~-----~-~~-~~~A~~~~~~l~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~ipI 247 (381)
T 3fcp_A 182 HTRAIVEAL--GDRASIRVDVNQ-----A-WD-AATGAKGCRELAAMGVDLI----EQPVSAHDNAALVRLSQQ-IETAI 247 (381)
T ss_dssp HHHHHHHHT--CTTCEEEEECTT-----C-BC-HHHHHHHHHHHHHTTCSEE----ECCBCTTCHHHHHHHHHH-SSSEE
T ss_pred HHHHHHHHc--CCCCeEEEECCC-----C-CC-HHHHHHHHHHHhhcCccce----eCCCCcccHHHHHHHHHh-CCCCE
Confidence 345565543 123567776521 1 11 1245567888888886544 555667889999999987 89999
Q ss_pred EeccccCCHHHHHHHHHc-CCCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEEe
Q 015424 243 LCKEFIVDAWQIYYARTK-GADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~-GADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVEV 295 (407)
...+-+.+.+++.++... ++|.|.+...... -.+...+.+.|+..|+.+++-+
T Consensus 248 a~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 302 (381)
T 3fcp_A 248 LADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGT 302 (381)
T ss_dssp EESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECC
T ss_pred EECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCC
Confidence 999999999999888765 5899888776542 3456788899999999987654
No 473
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=88.70 E-value=0.81 Score=46.52 Aligned_cols=117 Identities=11% Similarity=0.103 Sum_probs=83.7
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....|..+.- .|. . ..+..++++.+++.|...| |+..-..+++.++.+|+. +++||
T Consensus 192 ~v~avR~av--G~d~~L~vDan-----~~~-t-~~~A~~~~~~Le~~~i~~i----EeP~~~~~~~~~~~l~~~-~~iPI 257 (433)
T 3rcy_A 192 FCRKIRAAV--GDKADLLFGTH-----GQF-T-TAGAIRLGQAIEPYSPLWY----EEPVPPDNVGAMAQVARA-VRIPV 257 (433)
T ss_dssp HHHHHHHHH--TTSSEEEECCC-----SCB-C-HHHHHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-SSSCE
T ss_pred HHHHHHHHh--CCCCeEEEeCC-----CCC-C-HHHHHHHHHHhhhcCCCEE----ECCCChhhHHHHHHHHhc-cCCCE
Confidence 355666543 12356666531 222 1 2245567888888886655 344556789999999987 89999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEE
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALV 293 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLV 293 (407)
...+-+.++++..++...| +|.|.+....... .+...+...|+.+|+.+++
T Consensus 258 a~dE~~~~~~~~~~~l~~g~~D~v~~d~~~~GGit~~~kia~lA~~~gv~~~~ 310 (433)
T 3rcy_A 258 ATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAP 310 (433)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHTTTCEECC
T ss_pred EecCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEe
Confidence 9999999999999888776 8998887776643 4677788899999998654
No 474
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=88.67 E-value=1.7 Score=43.44 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=83.9
Q ss_pred HHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE
Q 015424 164 IGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL 243 (407)
Q Consensus 164 ~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL 243 (407)
..++++... ....|..+.- .|+ . ..+..++++.+++.|...|- +..-..+++.++.+|+. +++||.
T Consensus 200 v~avR~a~g--~~~~l~vDaN-----~~~-~-~~~A~~~~~~L~~~~i~~iE----eP~~~~~~~~~~~l~~~-~~iPIa 265 (400)
T 4dxk_A 200 FEKIRKAVG--DKMDIMVEFH-----SMW-Q-LLPAMQIAKALTPYQTFWHE----DPIKMDSLSSLTRYAAV-SPAPIS 265 (400)
T ss_dssp HHHHHHHHG--GGSEEEEECT-----TCB-C-HHHHHHHHHHTGGGCCSEEE----CCBCTTSGGGHHHHHHH-CSSCEE
T ss_pred HHHHHHHcC--CCceEEEECC-----CCC-C-HHHHHHHHHHHhhcCCCEEE----cCCCcccHHHHHHHHHh-CCCCEE
Confidence 455665431 1356776632 222 1 12445667888888865553 34455688999999987 899999
Q ss_pred eccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEE
Q 015424 244 CKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVE 294 (407)
Q Consensus 244 ~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVE 294 (407)
..+-+.++++..++...| +|.|.+....... .+...+...|+.+|+.+++-
T Consensus 266 ~dE~~~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~~~~h 318 (400)
T 4dxk_A 266 ASETLGSRWAFRDLLETGAAGVVMLDISWCGGLSEARKIASMAEAWHLPVAPH 318 (400)
T ss_dssp ECTTCCHHHHHHHHHHTTCCCEEEECTTTTTHHHHHHHHHHHHHHTTCCEEEC
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 999999999999888776 7999998888754 56778889999999998763
No 475
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=88.51 E-value=0.9 Score=45.37 Aligned_cols=119 Identities=15% Similarity=0.114 Sum_probs=82.7
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....|..++- .| +. ..+..++++.+++.|...| |+.+-..+++.++.+++. +++||
T Consensus 199 ~v~avRea~--G~d~~l~vDan-----~~-~~-~~~a~~~~~~l~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPI 264 (410)
T 2qq6_A 199 RVAAVREAV--GPEVEVAIDMH-----GR-FD-IPSSIRFARAMEPFGLLWL----EEPTPPENLDALAEVRRS-TSTPI 264 (410)
T ss_dssp HHHHHHHHH--CSSSEEEEECT-----TC-CC-HHHHHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHTT-CSSCE
T ss_pred HHHHHHHhc--CCCCEEEEECC-----CC-CC-HHHHHHHHHHHhhcCCCeE----ECCCChhhHHHHHHHHhh-CCCCE
Confidence 345555543 12456777662 12 11 1244566777778776543 344555789999999986 89999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCCCH-HHHHHHHHHHHHcCCcEEEEe
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~-~~L~~Li~~a~~LGL~aLVEV 295 (407)
...+-+.+++++.++...| +|.|.+....... .+...+.+.|+..|+.+++-+
T Consensus 265 a~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~ 319 (410)
T 2qq6_A 265 CAGENVYTRFDFRELFAKRAVDYVMPDVAKCGGLAEAKRIANLAELDYIPFAPHN 319 (410)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBC
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 9999999999999887766 8988887665533 456778889999999987743
No 476
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=88.46 E-value=0.46 Score=46.70 Aligned_cols=120 Identities=10% Similarity=0.103 Sum_probs=86.6
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....+..+.- .|+ . ..+..++++.+++.|...| |+.+-.++++.+..+|+. +++||
T Consensus 173 ~v~avR~~~--g~~~~l~vDan-----~~~-~-~~~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 238 (356)
T 3ro6_B 173 RLRRLHETL--AGRAVVRVDPN-----QSY-D-RDGLLRLDRLVQELGIEFI----EQPFPAGRTDWLRALPKA-IRRRI 238 (356)
T ss_dssp HHHHHHHHH--TTSSEEEEECT-----TCC-C-HHHHHHHHHHHHHTTCCCE----ECCSCTTCHHHHHTSCHH-HHHTE
T ss_pred HHHHHHHHh--CCCCEEEEeCC-----CCC-C-HHHHHHHHHHHHhcCCCEE----ECCCCCCcHHHHHHHHhc-CCCCE
Confidence 345566543 12456777642 121 1 1244567888898886655 455666788999888876 78999
Q ss_pred EeccccCCHHHHHHHHHcC--CCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEEeC
Q 015424 243 LCKEFIVDAWQIYYARTKG--ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEVH 296 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G--ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVEVh 296 (407)
...+-+.+++++.+....| +|.|.+...... -.+...+.+.|+..|+.+++-+.
T Consensus 239 a~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~ 295 (356)
T 3ro6_B 239 AADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARRIATIAETAGIDLMWGCM 295 (356)
T ss_dssp EESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHHHHHHHHHHTCEEEECCC
T ss_pred EeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 9999999999999888765 999999877663 45677888999999999987654
No 477
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=88.37 E-value=6.7 Score=31.82 Aligned_cols=87 Identities=13% Similarity=0.083 Sum_probs=57.4
Q ss_pred HHHHHHHHHcC-CcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccC-chhHHHHhhcccccccccCC
Q 015424 278 RYMTKICKLLG-LTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVD-NSNTKKLLEGERGEIIRQKN 355 (407)
Q Consensus 278 ~~Li~~a~~LG-L~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vD-l~~t~~L~~~~~~~~i~~~~ 355 (407)
..+.+.....| ...+.++++.+|+...+.-..+++|=+... + . ..| ++....|... ...
T Consensus 29 ~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~-l---------~--~~~g~~~~~~l~~~-------~~~ 89 (152)
T 3eul_A 29 EGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYR-M---------P--GMDGAQVAAAVRSY-------ELP 89 (152)
T ss_dssp HHHHHHHHHHSSEEEEEEESSHHHHHHHHHHHCCSEEEEETT-C---------S--SSCHHHHHHHHHHT-------TCS
T ss_pred HHHHHHHhhCCCeEEEEEeCCHHHHHHHHHhcCCCEEEEeCC-C---------C--CCCHHHHHHHHHhc-------CCC
Confidence 33555556677 444558999999987775446777766421 2 1 111 2233333332 235
Q ss_pred ceEEEeeCCCCHHHHHHHHHcCCCEEEE
Q 015424 356 IIVVGESGLFTPDDIAYVQEAGVKAVLV 383 (407)
Q Consensus 356 v~vVAESGI~t~eD~~~l~~~GadaVLV 383 (407)
+.+|.-++-.+.+.+..+.++|++++|.
T Consensus 90 ~~ii~~s~~~~~~~~~~~~~~g~~~~l~ 117 (152)
T 3eul_A 90 TRVLLISAHDEPAIVYQALQQGAAGFLL 117 (152)
T ss_dssp CEEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred CeEEEEEccCCHHHHHHHHHcCCCEEEe
Confidence 7888899999999999999999999865
No 478
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=88.31 E-value=1.4 Score=43.88 Aligned_cols=91 Identities=11% Similarity=0.089 Sum_probs=70.5
Q ss_pred CHHHHHHHHHHcCC--cEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEEEeccCCC-
Q 015424 198 DPVEIARSYEKGGA--ACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP- 273 (407)
Q Consensus 198 dp~~iA~ay~~~GA--~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~- 273 (407)
+..++++.+++.|. ..| |+.+-..+++.+..+|+. +++|| .+-+.+++++.++...| +|.|.+......
T Consensus 202 ~A~~~~~~l~~~~i~~~~i----EqP~~~~d~~~~~~l~~~-~~iPI--dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GG 274 (391)
T 3gd6_A 202 DAHRAIKRLTKYDLGLEMI----ESPAPRNDFDGLYQLRLK-TDYPI--SEHVWSFKQQQEMIKKDAIDIFNISPVFIGG 274 (391)
T ss_dssp HHHHHHHHHTTCCSSCCEE----ECCSCTTCHHHHHHHHHH-CSSCE--EEECCCHHHHHHHHHHTCCSEEEECHHHHTS
T ss_pred HHHHHHHHHHhcCCCccee----cCCCChhhHHHHHHHHHH-cCCCc--CCCCCCHHHHHHHHHcCCCCEEEECchhcCC
Confidence 44567788888775 433 344556789999999987 89999 66788999998887665 899999877663
Q ss_pred HHHHHHHHHHHHHcCCcEEEEe
Q 015424 274 DLDIRYMTKICKLLGLTALVEV 295 (407)
Q Consensus 274 ~~~L~~Li~~a~~LGL~aLVEV 295 (407)
-.+...+.+.|+.+|+.+++-+
T Consensus 275 it~~~~ia~~A~~~gi~~~~~~ 296 (391)
T 3gd6_A 275 LTSAKKAAYAAEVASKDVVLGT 296 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHHcCCEEEecC
Confidence 4567788999999999988754
No 479
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=88.18 E-value=1.4 Score=43.08 Aligned_cols=120 Identities=10% Similarity=0.045 Sum_probs=86.0
Q ss_pred cHHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCc
Q 015424 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP 241 (407)
Q Consensus 162 ~f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lP 241 (407)
....++++.. ....+..+.- |-+.. .+ .++++.+++.|...| -+| +-..+++.+..+++. +.+|
T Consensus 171 ~~v~avr~a~---~~~~l~vDan------~~~~~-~~-~~~~~~l~~~~i~~i---EqP-~~~~d~~~~~~l~~~-~~ip 234 (369)
T 2zc8_A 171 EVLKAVREAF---PEATLTADAN------SAYSL-AN-LAQLKRLDELRLDYI---EQP-LAYDDLLDHAKLQRE-LSTP 234 (369)
T ss_dssp HHHHHHHHHC---TTSCEEEECT------TCCCG-GG-HHHHHGGGGGCCSCE---ECC-SCTTCSHHHHHHHHH-CSSC
T ss_pred HHHHHHHHHc---CCCeEEEecC------CCCCH-HH-HHHHHHHHhCCCcEE---ECC-CCcccHHHHHHHHhh-CCCC
Confidence 3456666643 2345666652 22232 34 778888888875543 344 455788999999986 8999
Q ss_pred EEeccccCCHHHHHHHHHcC-CCEEEEeccCC-CHHHHHHHHHHHHHcCCcEEEEeCC
Q 015424 242 LLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEVHD 297 (407)
Q Consensus 242 VL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL-~~~~L~~Li~~a~~LGL~aLVEVht 297 (407)
|...+-+.+++++.++...| +|.|.+-.... +-.+...+.+.|+..|+.+++-...
T Consensus 235 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 292 (369)
T 2zc8_A 235 ICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWMGGML 292 (369)
T ss_dssp EEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred EEEcCccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 99999999999999987776 89999976655 3456778899999999998776543
No 480
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=88.18 E-value=3.9 Score=37.45 Aligned_cols=120 Identities=13% Similarity=0.118 Sum_probs=74.2
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecC--CcCCCCHHHHHHHHh----cCCCCcEEeccc--cCC--------H--HHHHHHH
Q 015424 197 FDPVEIARSYEKGGAACLSILTDE--KYFKGSFENLEAVRS----AGVKCPLLCKEF--IVD--------A--WQIYYAR 258 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~--~~F~Gs~edL~~Vr~----a~v~lPVL~KDF--Iid--------~--~QI~eAr 258 (407)
.+..+..+...+.|..+|-+.... .+...+..++..+++ .+..+..+.-.+ -.+ . ..+..|.
T Consensus 15 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~ 94 (286)
T 3dx5_A 15 ISFTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILAN 94 (286)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHH
Confidence 577788888888888888874320 011112355555553 223333332211 111 0 1456688
Q ss_pred HcCCCEEEEeccCCCH------------HHHHHHHHHHHHcCCcEEEEeC------CHHHHHHHhcccCCcEEEee
Q 015424 259 TKGADAVLLIAAVLPD------------LDIRYMTKICKLLGLTALVEVH------DEREMDRVLGIEGIELIGIN 316 (407)
Q Consensus 259 ~~GADaVLLiaaiL~~------------~~L~~Li~~a~~LGL~aLVEVh------t~eElerAl~l~Ga~iIGIN 316 (407)
.+||..|.+....... +.|.++.++|++.|+...+|.| +.+++.+.++.-+..-+|++
T Consensus 95 ~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l~~~~~~~~vg~~ 170 (286)
T 3dx5_A 95 WFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLELLGEVDHPNLKIN 170 (286)
T ss_dssp HHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHHHHCCTTEEEE
T ss_pred HhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHHHHhcCCCCeEEE
Confidence 9999999886544321 3466777888889999999998 67888777764355567774
No 481
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=87.91 E-value=2.1 Score=42.63 Aligned_cols=120 Identities=12% Similarity=0.112 Sum_probs=84.6
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHH--cCCcEEEEEecCCcCCCCHHHHHHHHhcCCCC
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEK--GGAACLSILTDEKYFKGSFENLEAVRSAGVKC 240 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~--~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~l 240 (407)
...++++.. .....+..+.- .|+ . ..+..++++.+++ .| +.-+-+| .-..+++.+..+++. +.+
T Consensus 175 ~v~avR~a~--g~~~~L~vDaN-----~~w-~-~~~A~~~~~~l~~~~~~---l~~iEeP-~~~~d~~~~~~l~~~-~~i 240 (379)
T 3r0u_A 175 LLKALDNEF--SKNIKFRFDAN-----QGW-N-LAQTKQFIEEINKYSLN---VEIIEQP-VKYYDIKAMAEITKF-SNI 240 (379)
T ss_dssp HHHHHHHHC--CTTSEEEEECT-----TCC-C-HHHHHHHHHHHHTSCCC---EEEEECC-SCTTCHHHHHHHHHH-CSS
T ss_pred HHHHHHHhc--CCCCeEEEeCC-----CCc-C-HHHHHHHHHHHhhcCCC---cEEEECC-CCcccHHHHHHHHhc-CCC
Confidence 455666543 12356777632 121 1 1244566777777 44 5555454 555689999999987 899
Q ss_pred cEEeccccCCHHHHHHHHHcC-CCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEEeC
Q 015424 241 PLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEVH 296 (407)
Q Consensus 241 PVL~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVEVh 296 (407)
||...+-+.+.+++..+...| +|.|.+...... -.+...+.+.|+.+|+.+++-+.
T Consensus 241 PIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia~~A~~~gi~~~~~~~ 298 (379)
T 3r0u_A 241 PVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKIKKLADSAGISCMVGCM 298 (379)
T ss_dssp CEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CEEeCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEEeCC
Confidence 999999999999998888776 799888777664 45677889999999999887543
No 482
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=87.85 E-value=1.3 Score=41.32 Aligned_cols=80 Identities=14% Similarity=0.052 Sum_probs=58.8
Q ss_pred CCHHHHHHHHHHcCCcEEEEEecCCcCC----CCHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHH-cCCCEEEEecc
Q 015424 197 FDPVEIARSYEKGGAACLSILTDEKYFK----GSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYART-KGADAVLLIAA 270 (407)
Q Consensus 197 ~dp~~iA~ay~~~GA~aISVLTd~~~F~----Gs~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~-~GADaVLLiaa 270 (407)
.+|.++.++ .+.||+.|-+ |. |+++.|+.++.. . ++|++.=+. |++..+.+... .|||+|. +.+
T Consensus 127 ~t~~e~~~A-~~~Gad~vk~------FPa~~~~G~~~lk~i~~~-~~~ipvvaiGG-I~~~N~~~~l~~~Ga~~v~-gSa 196 (225)
T 1mxs_A 127 STPSEIMMG-YALGYRRFKL------FPAEISGGVAAIKAFGGP-FGDIRFCPTGG-VNPANVRNYMALPNVMCVG-TTW 196 (225)
T ss_dssp CSHHHHHHH-HTTTCCEEEE------TTHHHHTHHHHHHHHHTT-TTTCEEEEBSS-CCTTTHHHHHHSTTBCCEE-ECT
T ss_pred CCHHHHHHH-HHCCCCEEEE------ccCccccCHHHHHHHHhh-CCCCeEEEECC-CCHHHHHHHHhccCCEEEE-Ech
Confidence 467676555 4679999988 43 468999999976 5 899987665 56677888888 6999999 998
Q ss_pred CCCHH-----HHHHHHHHHHH
Q 015424 271 VLPDL-----DIRYMTKICKL 286 (407)
Q Consensus 271 iL~~~-----~L~~Li~~a~~ 286 (407)
+...+ ++..+.+.+++
T Consensus 197 i~~~~~i~~~~~~~i~~~a~~ 217 (225)
T 1mxs_A 197 MLDSSWIKNGDWARIEACSAE 217 (225)
T ss_dssp TSCHHHHHTTCHHHHHHHHHH
T ss_pred hcCchhhccCCHHHHHHHHHH
Confidence 88753 34456555554
No 483
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=87.69 E-value=2.3 Score=41.83 Aligned_cols=88 Identities=14% Similarity=0.125 Sum_probs=66.1
Q ss_pred HHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHc-CCCEEEEeccCC-CHHHH
Q 015424 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK-GADAVLLIAAVL-PDLDI 277 (407)
Q Consensus 200 ~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~-GADaVLLiaaiL-~~~~L 277 (407)
.++++.++ .| + .+-+| +. +++.++.+|+. +++||...+-+.+++++.++... ++|.|.+-.... +-.+.
T Consensus 207 ~~~~~~l~-~~---i-~iEqP-~~--d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~ 277 (378)
T 2qdd_A 207 VEVLNSVR-AR---D-WIEQP-CQ--TLDQCAHVARR-VANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRA 277 (378)
T ss_dssp HHHHTSCC-CC---C-EEECC-SS--SHHHHHHHHTT-CCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHhC-CC---c-EEEcC-CC--CHHHHHHHHHh-CCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHH
Confidence 34444444 44 3 33444 33 89999999986 89999999999999998887655 589999977665 44567
Q ss_pred HHHHHHHHHcCCcEEEEeC
Q 015424 278 RYMTKICKLLGLTALVEVH 296 (407)
Q Consensus 278 ~~Li~~a~~LGL~aLVEVh 296 (407)
..+.+.|+..|+.+++-+.
T Consensus 278 ~~i~~~A~~~g~~~~~~~~ 296 (378)
T 2qdd_A 278 RQIRDFGVSVGWQMHIEDV 296 (378)
T ss_dssp HHHHHHHHHHTCEEEECCS
T ss_pred HHHHHHHHHcCCeEEecCC
Confidence 7888999999999887643
No 484
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=87.67 E-value=3.9 Score=39.79 Aligned_cols=164 Identities=16% Similarity=0.154 Sum_probs=0.0
Q ss_pred HHHHHHHHHHc----CCcEEEE-------EecCCcCCC-----CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCC
Q 015424 199 PVEIARSYEKG----GAACLSI-------LTDEKYFKG-----SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGA 262 (407)
Q Consensus 199 p~~iA~ay~~~----GA~aISV-------LTd~~~F~G-----s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GA 262 (407)
..++|+.+.+. |...+-= -|-+..|+| .+.-|+.+++. ..+|++.-= .|+.++.....+ +
T Consensus 33 ~~e~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e-~Glp~~tev--~d~~~v~~l~~~-v 108 (288)
T 3tml_A 33 TIDTAGRLKEICEKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQ-LGLPVLTDV--HSIDEIEQVASV-V 108 (288)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECBC--------------CHHHHHHHHHHHHHH-HCCCEEEEC--CSGGGHHHHHHH-C
T ss_pred HHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHh-cCCeEEEEe--CCHHHHHHHHHh-C
Q ss_pred CEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHhcc---cCC------cEEEeecccccccccccccc
Q 015424 263 DAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLGI---EGI------ELIGINNRNLAISIFSYRTE 330 (407)
Q Consensus 263 DaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVh---t~eElerAl~l---~Ga------~iIGINnRdL~~~~~~~t~~ 330 (407)
|.+-+.+.-+.+.+ |++.+-.+|..+++... +.+|++.|++. .|. +-|.+-.|.. .|+..
T Consensus 109 d~lkIgA~~~~n~~---LLr~~a~~gkPVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~-----~y~~~ 180 (288)
T 3tml_A 109 DVLQTPAFLCRQTD---FIHACARSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGV-----SFGYN 180 (288)
T ss_dssp SEEEECGGGTTCHH---HHHHHHTSSSCEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCE-----ECSSS
T ss_pred CEEEECcccccCHH---HHHHHHccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCC-----CCCCC
Q ss_pred ccccCchhHHHHhhcccccccccCCceEEE-eeCC-----------CC-----HHHHHHHHHcCCCEEEE
Q 015424 331 TFEVDNSNTKKLLEGERGEIIRQKNIIVVG-ESGL-----------FT-----PDDIAYVQEAGVKAVLV 383 (407)
Q Consensus 331 Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVA-ESGI-----------~t-----~eD~~~l~~~GadaVLV 383 (407)
++.+|+.....|.+. +++|+. .+-- .. +.-......+||||++|
T Consensus 181 ~~~vdl~~i~~lk~~---------~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~i 241 (288)
T 3tml_A 181 NLVSDMRSLAIMRET---------NAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFM 241 (288)
T ss_dssp CEECCHHHHHHGGGG---------SSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEE
T ss_pred cCcCCHHHHHHHHhc---------CCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEE
No 485
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=87.58 E-value=1.8 Score=43.51 Aligned_cols=117 Identities=10% Similarity=0.018 Sum_probs=83.1
Q ss_pred HHHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcE
Q 015424 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (407)
Q Consensus 163 f~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPV 242 (407)
...++++.. .....|..+. ..|+ . ..+..++++.+++.|...|- +|. .+++.+..+|+. +++||
T Consensus 202 ~v~avR~av--G~d~~l~vDa-----N~~~-~-~~~A~~~~~~L~~~~i~~iE---~P~---~d~~~~~~l~~~-~~iPI 265 (409)
T 3go2_A 202 HLEALRDGA--GPDVEILLDL-----NFNA-K-PEGYLKILRELADFDLFWVE---IDS---YSPQGLAYVRNH-SPHPI 265 (409)
T ss_dssp HHHHHHHHH--CTTSEEEEEC-----TTCS-C-HHHHHHHHHHTTTSCCSEEE---CCC---SCHHHHHHHHHT-CSSCE
T ss_pred HHHHHHHHh--CCCCEEEEEC-----CCCC-C-HHHHHHHHHHHhhcCCeEEE---eCc---CCHHHHHHHHhh-CCCCE
Confidence 355666543 1245677764 1122 1 12345578888888877665 453 389999999986 89999
Q ss_pred EeccccCCHHHHHHHHHcC-CCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEEeCC
Q 015424 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHD 297 (407)
Q Consensus 243 L~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVEVht 297 (407)
...+-+.++++..++...| +|.|.+....=.-.+...+...|+..|+.+++ |.
T Consensus 266 a~dE~~~~~~~~~~~i~~~~~d~v~~k~~~GGit~~~~ia~~A~~~gi~~~~--h~ 319 (409)
T 3go2_A 266 SSCETLFGIREFKPFFDANAVDVAIVDTIWNGVWQSMKIAAFADAHDINVAP--HN 319 (409)
T ss_dssp EECTTCCHHHHHHHHHHTTCCSEEEECHHHHCHHHHHHHHHHHHHTTCEEEE--CC
T ss_pred EeCCCcCCHHHHHHHHHhCCCCEEEeCCCCCCHHHHHHHHHHHHHcCCEEee--cC
Confidence 9999999999999888776 79998877651224667788899999999985 65
No 486
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=87.56 E-value=1.5 Score=42.08 Aligned_cols=117 Identities=17% Similarity=0.254 Sum_probs=77.6
Q ss_pred HHHcCCCEEEEe--c-cCCCHHHHHHHHHHHHHcCCcE-----EEEeC----CHHH-HHHHhcccCCcEEEeeccccccc
Q 015424 257 ARTKGADAVLLI--A-AVLPDLDIRYMTKICKLLGLTA-----LVEVH----DERE-MDRVLGIEGIELIGINNRNLAIS 323 (407)
Q Consensus 257 Ar~~GADaVLLi--a-aiL~~~~L~~Li~~a~~LGL~a-----LVEVh----t~eE-lerAl~l~Ga~iIGINnRdL~~~ 323 (407)
....=.|.+=+. + ++.+.+-|++.++.+|++|+.+ |.|+. ..++ ++.+.++ |++.|=|++
T Consensus 34 ~~g~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~l-Gf~~iEiS~------ 106 (251)
T 1qwg_A 34 VCGDYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKL-GFEAVEISD------ 106 (251)
T ss_dssp HHGGGCSEEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHH-TCCEEEECC------
T ss_pred HhhhhcceEEecCceeeecCHHHHHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHc-CCCEEEECC------
Confidence 333345666664 2 2335566888888888888876 33321 2333 4566666 888888864
Q ss_pred cccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCH------------HHHHHHHHcCCCEEEEcc------
Q 015424 324 IFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTP------------DDIAYVQEAGVKAVLVGE------ 385 (407)
Q Consensus 324 ~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~------------eD~~~l~~~GadaVLVGe------ 385 (407)
.+.+++.+.-.++++... ..+..+++|-|.+.+ +.+++..++||+-|+|=.
T Consensus 107 ------G~i~l~~~~~~~~I~~~~-----~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~~ 175 (251)
T 1qwg_A 107 ------GSSDISLEERNNAIKRAK-----DNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGKG 175 (251)
T ss_dssp ------SSSCCCHHHHHHHHHHHH-----HTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECCTTTCCS
T ss_pred ------CcccCCHHHHHHHHHHHH-----HCCCEEeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEeeecccCC
Confidence 455666666666766532 356899999999988 356778899999999965
Q ss_pred -cccCCC
Q 015424 386 -SIVKQD 391 (407)
Q Consensus 386 -aLmk~~ 391 (407)
.|+++.
T Consensus 176 iGi~~~~ 182 (251)
T 1qwg_A 176 KGLFDKE 182 (251)
T ss_dssp STTBCTT
T ss_pred cccCCCC
Confidence 566655
No 487
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=87.50 E-value=4.3 Score=32.01 Aligned_cols=105 Identities=11% Similarity=0.020 Sum_probs=63.0
Q ss_pred HHHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccC-chhHHHHhhcccccccccCC
Q 015424 277 IRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVD-NSNTKKLLEGERGEIIRQKN 355 (407)
Q Consensus 277 L~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vD-l~~t~~L~~~~~~~~i~~~~ 355 (407)
...+.+...+.|..+...+.+.+++...+.-..+++|=+.. ++ . ..| ++....|... ..+
T Consensus 14 ~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~-~l---------~--~~~g~~~~~~l~~~-------~~~ 74 (134)
T 3f6c_A 14 IAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDV-DI---------P--GVNGIQVLETLRKR-------QYS 74 (134)
T ss_dssp HHHHHHHHHHTTEEEEEEESSSTTHHHHHHHHCCSEEEEET-TC---------S--SSCHHHHHHHHHHT-------TCC
T ss_pred HHHHHHHHhhCCcEEEEEcCCHHHHHHHHHhcCCCEEEEec-CC---------C--CCChHHHHHHHHhc-------CCC
Confidence 34455556678977766888888887766544677776632 12 1 111 2233334332 235
Q ss_pred ceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHHHhhhc
Q 015424 356 IIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGITGLFG 402 (407)
Q Consensus 356 v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i~~L~~ 402 (407)
+++|.-++-.+.+....+.++|+++++.-. +.......+++.++.
T Consensus 75 ~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp--~~~~~l~~~i~~~~~ 119 (134)
T 3f6c_A 75 GIIIIVSAKNDHFYGKHCADAGANGFVSKK--EGMNNIIAAIEAAKN 119 (134)
T ss_dssp SEEEEEECC---CTHHHHHHTTCSEEEEGG--GCTHHHHHHHHHHHT
T ss_pred CeEEEEeCCCChHHHHHHHHhCCCEEEeCC--CCHHHHHHHHHHHHC
Confidence 778888898899999999999999987643 233444455555544
No 488
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=87.48 E-value=5.7 Score=38.03 Aligned_cols=133 Identities=13% Similarity=0.025 Sum_probs=81.3
Q ss_pred CceEEEEecccCCCcCCCCC--CCCHHHHHHHHHHcCCc-EEEEEecCCcCCCCHHHHHHHHhcCCCCcEE--eccccC-
Q 015424 176 LPALIAEVKKASPSRGILRE--DFDPVEIARSYEKGGAA-CLSILTDEKYFKGSFENLEAVRSAGVKCPLL--CKEFIV- 249 (407)
Q Consensus 176 ~~~vIAEvKraSPSkG~i~~--~~dp~~iA~ay~~~GA~-aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL--~KDFIi- 249 (407)
+..+..|+|......+. .. ..-...+++...+.|.. .+-+- .-+.+.|..+|+...++|+- ..+...
T Consensus 143 ~~~l~IEiK~~~~~~~~-~~~~~~~~~~v~~~l~~~~~~~~v~i~------SF~~~~l~~~~~~~p~~~~~~l~~~~~~~ 215 (313)
T 3l12_A 143 APYLLLELKSDPALMHD-HAARAEMVAAVLADVRRYRMEPRTVMH------SFDWALLGECRRQAPDLPTSYLSQLPENA 215 (313)
T ss_dssp CCEEEEEECCCGGGTTC-HHHHHHHHHHHHHHHHHTTCGGGEEEE------ESCHHHHHHHHHHCTTSCEEEEECCCC--
T ss_pred CceEEEEEccCCccccc-cccHHHHHHHHHHHHHHcCCCCCEEEE------cCCHHHHHHHHHHCCCCcEEEEecccccc
Confidence 57899999975432111 00 00123455666666643 22221 12678899998753456643 322110
Q ss_pred ------CHH-----------H-HHHHHHcCCCEEEEeccCCCHHHHHHHHHHHHHcCCcEEEE-eCCHHHHHHHhcccCC
Q 015424 250 ------DAW-----------Q-IYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGI 310 (407)
Q Consensus 250 ------d~~-----------Q-I~eAr~~GADaVLLiaaiL~~~~L~~Li~~a~~LGL~aLVE-Vht~eElerAl~l~Ga 310 (407)
.++ . ...+...|++.+......++. ++++.+|+.|+.+.+= |.+.+++++++++ |+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~Gl~V~~WTVn~~~~~~~l~~~-GV 290 (313)
T 3l12_A 216 DDPGEDSAKPVGPDYDRMTESLPQAVASAGGQLWCPYFLDVTP----ELVAEAHDLGLIVLTWTVNEPEDIRRMATT-GV 290 (313)
T ss_dssp -----------CCCTTTCCSCHHHHHHHHTCSEEEEBGGGCCH----HHHHHHHHTTCEEEEBCCCSHHHHHHHHHH-TC
T ss_pred ccccccccccccccchhccccHHHHHHHhCCcEEecchhcCCH----HHHHHHHHCCCEEEEEcCCCHHHHHHHHHc-CC
Confidence 011 0 233567899999998877765 3778899999988442 6889999999998 99
Q ss_pred cEEEeecccc
Q 015424 311 ELIGINNRNL 320 (407)
Q Consensus 311 ~iIGINnRdL 320 (407)
+-|-.|..++
T Consensus 291 DgIiTD~P~~ 300 (313)
T 3l12_A 291 DGIVTDYPGR 300 (313)
T ss_dssp SEEEESCHHH
T ss_pred CEEEeCCHHH
Confidence 9887754443
No 489
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=87.39 E-value=2.7 Score=41.22 Aligned_cols=111 Identities=15% Similarity=0.114 Sum_probs=73.4
Q ss_pred CCHHHHHH-HHHHcCCcEEEEEecCCcCCCCH---HHHHHHHhc-----CC---CCcEEeccccCCHHHHHHHHHcCCCE
Q 015424 197 FDPVEIAR-SYEKGGAACLSILTDEKYFKGSF---ENLEAVRSA-----GV---KCPLLCKEFIVDAWQIYYARTKGADA 264 (407)
Q Consensus 197 ~dp~~iA~-ay~~~GA~aISVLTd~~~F~Gs~---edL~~Vr~a-----~v---~lPVL~KDFIid~~QI~eAr~~GADa 264 (407)
.+-.++++ .+.+.|...|=+ .||.-+. +.++.+++. .. .+..++.- ...+..|.++|+|.
T Consensus 41 ~~k~~i~~~~L~~~Gv~~IE~----g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~----~~~i~~a~~~g~~~ 112 (337)
T 3ble_A 41 SEKLNIAKFLLQKLNVDRVEI----ASARVSKGELETVQKIMEWAATEQLTERIEILGFVDG----NKTVDWIKDSGAKV 112 (337)
T ss_dssp HHHHHHHHHHHHTTCCSEEEE----EETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESST----THHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHcCCCEEEE----eCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccc----hhhHHHHHHCCCCE
Confidence 36677899 999999998887 3444345 556666541 11 12223222 12688899999999
Q ss_pred EEEeccCCCH--------------HHHHHHHHHHHHcCCcEEEEeCC--------HH----HHHHHhcccCCcEEEee
Q 015424 265 VLLIAAVLPD--------------LDIRYMTKICKLLGLTALVEVHD--------ER----EMDRVLGIEGIELIGIN 316 (407)
Q Consensus 265 VLLiaaiL~~--------------~~L~~Li~~a~~LGL~aLVEVht--------~e----ElerAl~l~Ga~iIGIN 316 (407)
|-+-.+.-+. +.+.+.++++++.|+.+-+.+.+ .+ -++++.++ |++.|.+-
T Consensus 113 v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Ga~~i~l~ 189 (337)
T 3ble_A 113 LNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKE-HIERIFLP 189 (337)
T ss_dssp EEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTS-CCSEEEEE
T ss_pred EEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHc-CCCEEEEe
Confidence 9886543211 46677888899999998877756 33 34555665 99988874
No 490
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=87.35 E-value=2.4 Score=40.17 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=73.9
Q ss_pred HHHHHHHcCCcEEEEEecCCcC-CCCH----HHHHHHHhcCCC---CcEE-eccccCCHHHHHHH----HHcCCCEEEEe
Q 015424 202 IARSYEKGGAACLSILTDEKYF-KGSF----ENLEAVRSAGVK---CPLL-CKEFIVDAWQIYYA----RTKGADAVLLI 268 (407)
Q Consensus 202 iA~ay~~~GA~aISVLTd~~~F-~Gs~----edL~~Vr~a~v~---lPVL-~KDFIid~~QI~eA----r~~GADaVLLi 268 (407)
-++.+.+.||+.|.++-.-.++ .|.+ ++|..|+++ .+ ++|+ --.+ +++.++..| ..+|||.|=--
T Consensus 100 Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a-~~~~~lKVIlEt~~-Lt~eei~~a~~ia~~aGADfVKTS 177 (239)
T 3ngj_A 100 ETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDA-SGKALTKVIIECCY-LTNEEKVEVCKRCVAAGAEYVKTS 177 (239)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHH-HTTSEEEEECCGGG-SCHHHHHHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHH-hcCCceEEEEecCC-CCHHHHHHHHHHHHHHCcCEEECC
Confidence 3555677799999998766543 3555 467777765 33 4544 2345 577778776 78999999886
Q ss_pred ccCC----CHHHHHHHHHHHH-HcCCcEEEEeCCHHHHHHHhcccCCcEEEee
Q 015424 269 AAVL----PDLDIRYMTKICK-LLGLTALVEVHDEREMDRVLGIEGIELIGIN 316 (407)
Q Consensus 269 aaiL----~~~~L~~Li~~a~-~LGL~aLVEVht~eElerAl~l~Ga~iIGIN 316 (407)
+-.- +.++.+.|.+... ..|+.+==-++|.+++...+++ ||+-||+.
T Consensus 178 TGf~~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~a-GA~riGtS 229 (239)
T 3ngj_A 178 TGFGTHGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINN-GASRIGAS 229 (239)
T ss_dssp CSSSSCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHT-TEEEEEES
T ss_pred CCCCCCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHh-cccceecc
Confidence 4433 3345555555442 1233322237899999999998 99999984
No 491
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=87.33 E-value=8.4 Score=29.59 Aligned_cols=95 Identities=16% Similarity=0.181 Sum_probs=60.0
Q ss_pred HHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccC-chhHHHHhhcccccccccCCce
Q 015424 279 YMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVD-NSNTKKLLEGERGEIIRQKNII 357 (407)
Q Consensus 279 ~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vD-l~~t~~L~~~~~~~~i~~~~v~ 357 (407)
.+.......|.+++..+++.+++...+....+++|=+.- ++ . ..| ++...+|.+. ...+.
T Consensus 17 ~l~~~l~~~g~~vv~~~~~~~~a~~~~~~~~~dlil~D~-~l---------~--~~~g~~~~~~l~~~-------~~~~~ 77 (120)
T 1tmy_A 17 MLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDI-TM---------P--EMNGIDAIKEIMKI-------DPNAK 77 (120)
T ss_dssp HHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEEC-SC---------G--GGCHHHHHHHHHHH-------CTTCC
T ss_pred HHHHHHhhcCcEEEEEECCHHHHHHHHHhcCCCEEEEeC-CC---------C--CCcHHHHHHHHHhh-------CCCCe
Confidence 344445568998877899998887766533566665531 12 1 111 2233344332 13567
Q ss_pred EEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCCChHHHH
Q 015424 358 VVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQDDPGKGI 397 (407)
Q Consensus 358 vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~dp~~~i 397 (407)
+|.-++-.+.+....+.++|+++++. |+-++.+..
T Consensus 78 ii~~s~~~~~~~~~~~~~~g~~~~l~-----KP~~~~~l~ 112 (120)
T 1tmy_A 78 IIVCSAMGQQAMVIEAIKAGAKDFIV-----KPFQPSRVV 112 (120)
T ss_dssp EEEEECTTCHHHHHHHHHTTCCEEEE-----SSCCHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHhCcceeEe-----CCCCHHHHH
Confidence 88888888999999999999999854 555655443
No 492
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=87.31 E-value=0.96 Score=42.28 Aligned_cols=73 Identities=11% Similarity=0.094 Sum_probs=55.2
Q ss_pred HHHHHHHHHcC-CcEEEEEecCCcCCC------CHHHHHHHHhcCC-CCcEEeccccCCHHHHHHHHHcCCCEEEEeccC
Q 015424 200 VEIARSYEKGG-AACLSILTDEKYFKG------SFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (407)
Q Consensus 200 ~~iA~ay~~~G-A~aISVLTd~~~F~G------s~edL~~Vr~a~v-~lPVL~KDFIid~~QI~eAr~~GADaVLLiaai 271 (407)
.+..+.|...| ++.|-+.|-..-|+| .++.++.+|+. . +++|. =|+.+++..+.++..+|||.+..+.++
T Consensus 127 ~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~-~~~~~I~-VdGGI~~~ti~~~~~aGAd~~V~GsaI 204 (227)
T 1tqx_A 127 VQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKK-YKNLNIQ-VDGGLNIETTEISASHGANIIVAGTSI 204 (227)
T ss_dssp GGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHH-CTTCEEE-EESSCCHHHHHHHHHHTCCEEEESHHH
T ss_pred HHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHh-ccCCeEE-EECCCCHHHHHHHHHcCCCEEEEeHHH
Confidence 34567777755 999988876666777 36777788865 4 45544 466788999999999999999999998
Q ss_pred CCH
Q 015424 272 LPD 274 (407)
Q Consensus 272 L~~ 274 (407)
...
T Consensus 205 f~~ 207 (227)
T 1tqx_A 205 FNA 207 (227)
T ss_dssp HTC
T ss_pred hCC
Confidence 854
No 493
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=87.16 E-value=11 Score=36.29 Aligned_cols=164 Identities=17% Similarity=0.170 Sum_probs=95.1
Q ss_pred HHHHHHHcCCcEEEEEecCC-cCCC-------CH----HHHHHHHhcCCCCcEEe-cccc--CCHHHHHH----HHHcCC
Q 015424 202 IARSYEKGGAACLSILTDEK-YFKG-------SF----ENLEAVRSAGVKCPLLC-KEFI--VDAWQIYY----ARTKGA 262 (407)
Q Consensus 202 iA~ay~~~GA~aISVLTd~~-~F~G-------s~----edL~~Vr~a~v~lPVL~-KDFI--id~~QI~e----Ar~~GA 262 (407)
.|+..++.|..+|-|=.+.- +..| ++ ...+.|.+. +++||+. -||. .++.++.+ ...+||
T Consensus 28 sA~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~-~~~pviaD~d~Gyg~~~~~~~~~v~~l~~aGa 106 (275)
T 2ze3_A 28 SARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRA-VAIPVNADIEAGYGHAPEDVRRTVEHFAALGV 106 (275)
T ss_dssp HHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHH-CSSCEEEECTTCSSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhh-cCCCEEeecCCCCCCCHHHHHHHHHHHHHcCC
Confidence 45666666776665531110 1122 11 344555565 7899985 4444 56766543 346899
Q ss_pred CEEEEecc-------CCCHHHHHHHHHHHHHc----CCcEEEEeCCHH-----------HHHHH-------hcccCCcEE
Q 015424 263 DAVLLIAA-------VLPDLDIRYMTKICKLL----GLTALVEVHDER-----------EMDRV-------LGIEGIELI 313 (407)
Q Consensus 263 DaVLLiaa-------iL~~~~L~~Li~~a~~L----GL~aLVEVht~e-----------ElerA-------l~l~Ga~iI 313 (407)
++|.|=-. +.+.++..+-++.+..- |.+.++-.+|.. .++.+ .++ ||+.|
T Consensus 107 agv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eA-GAd~i 185 (275)
T 2ze3_A 107 AGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYADA-GADGI 185 (275)
T ss_dssp SEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHT-TCSEE
T ss_pred cEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHHC-CCCEE
Confidence 99998433 23444554545554443 888877766533 23322 233 99988
Q ss_pred EeeccccccccccccccccccCchhHHHHhhcccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcccccCCC
Q 015424 314 GINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQD 391 (407)
Q Consensus 314 GINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGeaLmk~~ 391 (407)
=+. .. ++.+...++.+.++ -.+.++.-.+..+. ..+.++|+.-|+.|.++++..
T Consensus 186 ~~e--------------~~-~~~~~~~~i~~~~~------~P~n~~~~~~~~~~---~eL~~lGv~~v~~~~~~~raa 239 (275)
T 2ze3_A 186 FVP--------------LA-LQSQDIRALADALR------VPLNVMAFPGSPVP---RALLDAGAARVSFGQSLMLAT 239 (275)
T ss_dssp ECT--------------TC-CCHHHHHHHHHHCS------SCEEEECCTTSCCH---HHHHHTTCSEEECTTHHHHHH
T ss_pred EEC--------------CC-CCHHHHHHHHHhcC------CCEEEecCCCCCCH---HHHHHcCCcEEEEChHHHHHH
Confidence 773 21 45556667766532 12333322345454 678899999999998887653
No 494
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=86.94 E-value=6 Score=36.78 Aligned_cols=113 Identities=17% Similarity=0.112 Sum_probs=72.8
Q ss_pred HHHHHHHcCCcEEEEEecCCcC-CCCH----HHHHHHHhcC--CCCcEEeccccCCHHHHHH----HHHcCCCEEEEecc
Q 015424 202 IARSYEKGGAACLSILTDEKYF-KGSF----ENLEAVRSAG--VKCPLLCKEFIVDAWQIYY----ARTKGADAVLLIAA 270 (407)
Q Consensus 202 iA~ay~~~GA~aISVLTd~~~F-~Gs~----edL~~Vr~a~--v~lPVL~KDFIid~~QI~e----Ar~~GADaVLLiaa 270 (407)
-++...+.||+.|.+...-.++ .|.. ++|..|+++. ..+||+.----.++.+|.. +.++|||.|=--.-
T Consensus 76 e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsTG 155 (220)
T 1ub3_A 76 EAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTSTG 155 (220)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred HHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 3566678899999999876655 3544 5777777651 1356543222245666654 45889999987643
Q ss_pred CC----CHHHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhcccCCcEEEee
Q 015424 271 VL----PDLDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGIN 316 (407)
Q Consensus 271 iL----~~~~L~~Li~~a~~LGL~aLV--EVht~eElerAl~l~Ga~iIGIN 316 (407)
.- +.++.+.|.+.. ...+.+.+ -++|.+++...+++ |++-||+.
T Consensus 156 f~~~gat~~dv~~m~~~v-g~~v~VkaaGGirt~~~al~~i~a-Ga~RiG~S 205 (220)
T 1ub3_A 156 FGPRGASLEDVALLVRVA-QGRAQVKAAGGIRDRETALRMLKA-GASRLGTS 205 (220)
T ss_dssp SSSCCCCHHHHHHHHHHH-TTSSEEEEESSCCSHHHHHHHHHT-TCSEEEET
T ss_pred CCCCCCCHHHHHHHHHhh-CCCCeEEEECCCCCHHHHHHHHHC-CCcccchh
Confidence 33 345666566544 32233222 36899999999997 99988883
No 495
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=86.90 E-value=0.82 Score=43.42 Aligned_cols=114 Identities=14% Similarity=0.211 Sum_probs=72.1
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcCCCEEEEecc-------
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA------- 270 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~GADaVLLiaa------- 270 (407)
+|..+.+.|.++||+.|+|..+.. .--.+.++.+|+.+..+=|-.+- -. |.+..+....+.|.||+++-
T Consensus 97 ~p~~~i~~~~~aGAd~itvH~Ea~--~~~~~~i~~ir~~G~k~Gvalnp-~T-p~e~l~~~l~~vD~VlvMsV~PGfgGQ 172 (246)
T 3inp_A 97 PVDALIESFAKAGATSIVFHPEAS--EHIDRSLQLIKSFGIQAGLALNP-AT-GIDCLKYVESNIDRVLIMSVNPGFGGQ 172 (246)
T ss_dssp SCHHHHHHHHHHTCSEEEECGGGC--SCHHHHHHHHHTTTSEEEEEECT-TC-CSGGGTTTGGGCSEEEEECSCTTC--C
T ss_pred CHHHHHHHHHHcCCCEEEEccccc--hhHHHHHHHHHHcCCeEEEEecC-CC-CHHHHHHHHhcCCEEEEeeecCCCCCc
Confidence 567788999999999999987653 11246788888764322111111 01 22222233347999998653
Q ss_pred -CCCH--HHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHhcccCCcEEEee
Q 015424 271 -VLPD--LDIRYMTKICKLLGLTALVEVH---DEREMDRVLGIEGIELIGIN 316 (407)
Q Consensus 271 -iL~~--~~L~~Li~~a~~LGL~aLVEVh---t~eElerAl~l~Ga~iIGIN 316 (407)
..+. +.++++.+...+.|.+..+||. +.+-+..+.++ ||+++-+-
T Consensus 173 ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~a-GAD~~V~G 223 (246)
T 3inp_A 173 KFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVC-GVNAFVAG 223 (246)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTT-TCCEEEES
T ss_pred ccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHc-CCCEEEEe
Confidence 1121 3455555555566888888886 67778888997 99987663
No 496
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=86.88 E-value=0.12 Score=48.13 Aligned_cols=73 Identities=14% Similarity=0.083 Sum_probs=50.2
Q ss_pred CCcEEEEEecCCcCCC------CHHHHHHHHhcCC-----CCcEEeccccCCHHHHHHHHHcCCCEEEEeccCCCHHHHH
Q 015424 210 GAACLSILTDEKYFKG------SFENLEAVRSAGV-----KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (407)
Q Consensus 210 GA~aISVLTd~~~F~G------s~edL~~Vr~a~v-----~lPVL~KDFIid~~QI~eAr~~GADaVLLiaaiL~~~~L~ 278 (407)
|++.|-+.+-..-|+| .++.++.+|+. . ++||.. ||.|.+.++.+...+|||.+..+.++...++..
T Consensus 134 ~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~-~~~~~~~~~I~v-~GGI~~~~~~~~~~aGad~vvvGSai~~a~d~~ 211 (230)
T 1tqj_A 134 VCDLILIMSVNPGFGGQSFIPEVLPKIRALRQM-CDERGLDPWIEV-DGGLKPNNTWQVLEAGANAIVAGSAVFNAPNYA 211 (230)
T ss_dssp GCSEEEEESSCC----CCCCGGGHHHHHHHHHH-HHHHTCCCEEEE-ESSCCTTTTHHHHHHTCCEEEESHHHHTSSCHH
T ss_pred cCCEEEEEEeccccCCccCcHHHHHHHHHHHHH-HHhcCCCCcEEE-ECCcCHHHHHHHHHcCCCEEEECHHHHCCCCHH
Confidence 6788876655444444 36778888865 4 788776 566777889999999999999999988654444
Q ss_pred HHHHHH
Q 015424 279 YMTKIC 284 (407)
Q Consensus 279 ~Li~~a 284 (407)
+-++..
T Consensus 212 ~~~~~l 217 (230)
T 1tqj_A 212 EAIAGV 217 (230)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 497
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=86.79 E-value=8.3 Score=30.68 Aligned_cols=86 Identities=19% Similarity=0.139 Sum_probs=57.0
Q ss_pred HHHHHHHHHcCCcEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhhcccccccccCCce
Q 015424 278 RYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLEGERGEIIRQKNII 357 (407)
Q Consensus 278 ~~Li~~a~~LGL~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~~~~~~~i~~~~v~ 357 (407)
..+.+.....|.++. .+.+.+++...+....+++|=+.. + .+.. .++....|.+. ..+++
T Consensus 18 ~~l~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~--~---------~~~~-g~~~~~~l~~~-------~~~~p 77 (142)
T 2qxy_A 18 LAVKNALEKDGFNVI-WAKNEQEAFTFLRREKIDLVFVDV--F---------EGEE-SLNLIRRIREE-------FPDTK 77 (142)
T ss_dssp HHHHHHHGGGTCEEE-EESSHHHHHHHHTTSCCSEEEEEC--T---------TTHH-HHHHHHHHHHH-------CTTCE
T ss_pred HHHHHHHHhCCCEEE-EECCHHHHHHHHhccCCCEEEEeC--C---------CCCc-HHHHHHHHHHH-------CCCCC
Confidence 334455556798766 889999988877654677776653 3 1110 12223333322 13578
Q ss_pred EEEeeCCCCHHHHHHHHHcCCCEEEE
Q 015424 358 VVGESGLFTPDDIAYVQEAGVKAVLV 383 (407)
Q Consensus 358 vVAESGI~t~eD~~~l~~~GadaVLV 383 (407)
+|.-++-.+.+.+..+.++|++++|.
T Consensus 78 ii~ls~~~~~~~~~~~~~~g~~~~l~ 103 (142)
T 2qxy_A 78 VAVLSAYVDKDLIINSVKAGAVDYIL 103 (142)
T ss_dssp EEEEESCCCHHHHHHHHHHTCSCEEE
T ss_pred EEEEECCCCHHHHHHHHHCCcceeEe
Confidence 88889999999999999999998754
No 498
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=86.64 E-value=2.3 Score=41.50 Aligned_cols=90 Identities=20% Similarity=0.217 Sum_probs=62.3
Q ss_pred CHHHHHHHHHHcCCcEEEEEecCCcCCC---------CHHH-HHHH-------HhcCCCCcEEecc-ccCCHHHHHHHHH
Q 015424 198 DPVEIARSYEKGGAACLSILTDEKYFKG---------SFEN-LEAV-------RSAGVKCPLLCKE-FIVDAWQIYYART 259 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd~~~F~G---------s~ed-L~~V-------r~a~v~lPVL~KD-FIid~~QI~eAr~ 259 (407)
++ +.|+++.+.|++.|-+ ++++-.| |.++ ...| ++...++-|||.. .|..+.+++.+..
T Consensus 172 ~~-eeA~amA~agpDiI~~--h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~ 248 (286)
T 2p10_A 172 SP-EDAVAMAKAGADILVC--HMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILD 248 (286)
T ss_dssp SH-HHHHHHHHHTCSEEEE--ECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHH
T ss_pred CH-HHHHHHHHcCCCEEEE--CCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHh
Confidence 44 5778889999999877 3443222 5666 3333 2323578999987 8999999999999
Q ss_pred c--CCCEEEEeccCC--C-HHHHHHHHHHHHHcCCc
Q 015424 260 K--GADAVLLIAAVL--P-DLDIRYMTKICKLLGLT 290 (407)
Q Consensus 260 ~--GADaVLLiaaiL--~-~~~L~~Li~~a~~LGL~ 290 (407)
. |+|+++.-.++- + ..-+.++++..+.+.+.
T Consensus 249 ~t~G~~G~~gASsier~p~e~ai~~~~~~fk~~~~~ 284 (286)
T 2p10_A 249 SCQGCHGFYGASSMERLPAEEAIRSQTLAFKAIRRQ 284 (286)
T ss_dssp HCTTCCEEEESHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred cCCCccEEEeehhhhcCCHHHHHHHHHHHHHhcccC
Confidence 8 999999977654 2 33466676666666654
No 499
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=86.58 E-value=0.47 Score=50.47 Aligned_cols=165 Identities=10% Similarity=0.034 Sum_probs=95.1
Q ss_pred CHHHHHHHHHHcCCcEEEEEec-------CC-cCC-C-CHHHHHHHHhcCCCCcEEeccccCCHHHHHHHHHcC-CCEEE
Q 015424 198 DPVEIARSYEKGGAACLSILTD-------EK-YFK-G-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVL 266 (407)
Q Consensus 198 dp~~iA~ay~~~GA~aISVLTd-------~~-~F~-G-s~edL~~Vr~a~v~lPVL~KDFIid~~QI~eAr~~G-ADaVL 266 (407)
+..++|+.+++ |+++|.|-.- +. |.. | ..+....+|+. +++||+.-..|.++.+..++...| ||.|.
T Consensus 245 ~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~ 322 (690)
T 3k30_A 245 DIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKL-TTKPVVGVGRFTSPDAMVRQIKAGILDLIG 322 (690)
T ss_dssp HHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGG-CSSCEEECSCCCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHH-cCCeEEEeCCCCCHHHHHHHHHCCCcceEE
Confidence 56778999888 7899887641 11 211 2 24666777886 899999988889999999999888 99999
Q ss_pred EeccCCCHHHHHHHHHHHHHcCC--cEEEEeCCHHHHHHHhcccCCcEEEeeccccccccccccccccccCchhHHHHhh
Q 015424 267 LIAAVLPDLDIRYMTKICKLLGL--TALVEVHDEREMDRVLGIEGIELIGINNRNLAISIFSYRTETFEVDNSNTKKLLE 344 (407)
Q Consensus 267 LiaaiL~~~~L~~Li~~a~~LGL--~aLVEVht~eElerAl~l~Ga~iIGINnRdL~~~~~~~t~~Tf~vDl~~t~~L~~ 344 (407)
+.-..+.+.+| .+.+++ |- +...+++...=+.+... +..+...-|... + ...+..... ..+.+
T Consensus 323 ~gR~~~~~P~~---~~~~~~-g~~~~i~~c~~c~~C~~~~~~--~~~~~C~vnp~~-----g---~e~~~~~~~-~~~~~ 387 (690)
T 3k30_A 323 AARPSIADPFL---PNKIRD-GRLNLIRECIGCNICVSGDLT--MSPIRCTQNPSM-----G---EEWRRGWHP-ERIRA 387 (690)
T ss_dssp ESHHHHHCTTH---HHHHHT-TCGGGCCCCCCCCHHHHHHHT--TSCCCCSSCTTT-----T---TTTTTCCCS-SCCCC
T ss_pred EcHHhHhCccH---HHHHHc-CCccccccccchhhhhhcccC--CCcccCCcCccc-----C---cccccccCc-cccCc
Confidence 98888866565 233332 21 11222222121122111 211212122211 0 000000000 00000
Q ss_pred cccccccccCCceEEEeeCCCCHHHHHHHHHcCCCEEEEcc
Q 015424 345 GERGEIIRQKNIIVVGESGLFTPDDIAYVQEAGVKAVLVGE 385 (407)
Q Consensus 345 ~~~~~~i~~~~v~vVAESGI~t~eD~~~l~~~GadaVLVGe 385 (407)
. ....-++|.-||+....-+..+.+.|.+-+|+-.
T Consensus 388 ~------~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~ 422 (690)
T 3k30_A 388 K------ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEA 422 (690)
T ss_dssp C------SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECS
T ss_pred c------cccceEEEECCCHHHHHHHHHHHHCCCeEEEEec
Confidence 0 0122478889999999999999999999777754
No 500
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=86.53 E-value=1.1 Score=45.63 Aligned_cols=119 Identities=13% Similarity=0.082 Sum_probs=83.8
Q ss_pred HHHHHhhhhcCCCceEEEEecccCCCcCCCCCCCCHHHHHHHHHHcCCcEEEEEecCCcCCCCHHHHHHHHhcCCCCcEE
Q 015424 164 IGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL 243 (407)
Q Consensus 164 ~~aL~~~~~~~~~~~vIAEvKraSPSkG~i~~~~dp~~iA~ay~~~GA~aISVLTd~~~F~Gs~edL~~Vr~a~v~lPVL 243 (407)
..++++.. .....|.++.- .|+ . ..+..++++.+++.|...| |+..-..+++.+..+|+. +++||.
T Consensus 230 v~avR~a~--G~d~~L~vDaN-----~~~-~-~~~A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPIa 295 (440)
T 3t6c_A 230 FDHLRNKL--GFSVELLHDAH-----ERI-T-PINAIHMAKALEPYQLFFL----EDPVAPENTEWLKMLRQQ-SSTPIA 295 (440)
T ss_dssp HHHHHHHH--CSSSEEEEECT-----TCS-C-HHHHHHHHHHTGGGCCSEE----ECSSCGGGGGGHHHHHHH-CCSCEE
T ss_pred HHHHHHhc--CCCCeEEEECC-----CCC-C-HHHHHHHHHHhhhcCCCEE----ECCCChhhHHHHHHHHhh-cCCCEE
Confidence 45566543 12456777642 122 1 1244566777888776555 344555678889999987 899999
Q ss_pred eccccCCHHHHHHHHHcC-CCEEEEeccCCC-HHHHHHHHHHHHHcCCcEEEEeC
Q 015424 244 CKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEVH 296 (407)
Q Consensus 244 ~KDFIid~~QI~eAr~~G-ADaVLLiaaiL~-~~~L~~Li~~a~~LGL~aLVEVh 296 (407)
..+-+.+.++..++...| +|.|.+...... -.+...+...|+.+|+.+++-+.
T Consensus 296 ~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 350 (440)
T 3t6c_A 296 MGELFVNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAIYSELNGVRTAWHSP 350 (440)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCS
T ss_pred eCcccCCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHHHHHHcCCEEEeccC
Confidence 999999999998887765 899988877764 45677889999999998765443
Done!