Your job contains 1 sequence.
>015426
MTYADFCQFCASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLE
EEVCHVLFTVDVQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSF
HCSCISKWTDSSCPVCRYCQQQPEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHW
KETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDSG
TSDALLSSKVEAIVNEYNELLAAQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQ
KMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLR
DLMAYLEAEKTLQQLSISNEIKDGTVLPMSVESSTSTGTKGKGKKIQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015426
(407 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2057469 - symbol:BRIZ2 "AT2G26000" species:370... 1530 5.5e-157 1
TAIR|locus:2060045 - symbol:BRIZ1 "AT2G42160" species:370... 1110 1.8e-112 1
DICTYBASE|DDB_G0270200 - symbol:DDB_G0270200 "BRCA1-assoc... 644 7.5e-78 2
UNIPROTKB|F1NJH4 - symbol:BRAP "Uncharacterized protein" ... 742 1.7e-73 1
UNIPROTKB|F1NR06 - symbol:BRAP "Uncharacterized protein" ... 742 1.7e-73 1
UNIPROTKB|F1PGI5 - symbol:BRAP "Uncharacterized protein" ... 728 5.3e-72 1
ZFIN|ZDB-GENE-040718-168 - symbol:brap "BRCA1 associated ... 728 5.3e-72 1
UNIPROTKB|A6H716 - symbol:BRAP "BRAP protein" species:991... 727 6.7e-72 1
UNIPROTKB|J3KNN7 - symbol:BRAP "BRCA1-associated protein"... 724 1.4e-71 1
UNIPROTKB|Q7Z569 - symbol:BRAP "BRCA1-associated protein"... 724 1.4e-71 1
MGI|MGI:1919649 - symbol:Brap "BRCA1 associated protein" ... 715 1.3e-70 1
FB|FBgn0038686 - symbol:CG5555 species:7227 "Drosophila m... 673 3.6e-66 1
UNIPROTKB|B4DRM1 - symbol:BRAP "cDNA FLJ50182, highly sim... 589 2.0e-63 2
UNIPROTKB|F8VZK5 - symbol:BRAP "BRCA1-associated protein"... 621 1.2e-60 1
POMBASE|SPAC16E8.13 - symbol:SPAC16E8.13 "ubiquitin-prote... 601 1.5e-58 1
WB|WBGene00017144 - symbol:EEED8.16 species:6239 "Caenorh... 570 2.9e-55 1
ASPGD|ASPL0000042460 - symbol:AN10251 species:162425 "Eme... 539 5.6e-52 1
UNIPROTKB|I3L5N8 - symbol:BRAP "Uncharacterized protein" ... 491 6.9e-47 1
SGD|S000001002 - symbol:ETP1 "Putative protein of unknown... 487 1.8e-46 1
CGD|CAL0005604 - symbol:orf19.1576 species:5476 "Candida ... 323 6.0e-46 2
UNIPROTKB|F8VRW0 - symbol:USP44 "Ubiquitin carboxyl-termi... 150 5.4e-10 1
UNIPROTKB|F8VVD6 - symbol:USP44 "Ubiquitin carboxyl-termi... 150 5.4e-10 1
UNIPROTKB|E1BLZ0 - symbol:USP44 "Ubiquitin carboxyl-termi... 163 1.0e-08 1
RGD|1308216 - symbol:Usp44 "ubiquitin specific peptidase ... 158 1.9e-08 1
ZFIN|ZDB-GENE-040426-774 - symbol:usp44 "ubiquitin specif... 159 2.7e-08 1
UNIPROTKB|F8VRI7 - symbol:USP44 "Ubiquitin carboxyl-termi... 155 4.3e-08 1
UNIPROTKB|Q6NTR6 - symbol:usp44-a "Ubiquitin carboxyl-ter... 156 5.7e-08 1
UNIPROTKB|Q5XGZ2 - symbol:usp44-b "Ubiquitin carboxyl-ter... 155 7.3e-08 1
UNIPROTKB|Q9H0E7 - symbol:USP44 "Ubiquitin carboxyl-termi... 155 7.6e-08 1
UNIPROTKB|E2R0T7 - symbol:USP44 "Ubiquitin carboxyl-termi... 154 9.0e-08 1
UNIPROTKB|E2R0W7 - symbol:USP44 "Ubiquitin carboxyl-termi... 154 9.9e-08 1
UNIPROTKB|G8JYB7 - symbol:hda-6 "Protein HDA-6, isoform d... 129 1.0e-07 1
UNIPROTKB|Q0V9G5 - symbol:usp44 "Ubiquitin carboxyl-termi... 153 1.1e-07 1
UNIPROTKB|I3LA47 - symbol:USP44 "Ubiquitin carboxyl-termi... 152 1.6e-07 1
UNIPROTKB|D2HBJ8 - symbol:USP44 "Ubiquitin carboxyl-termi... 152 1.6e-07 1
UNIPROTKB|F1P4C5 - symbol:USP44 "Ubiquitin carboxyl-termi... 152 1.6e-07 1
ZFIN|ZDB-GENE-030131-4153 - symbol:usp16 "ubiquitin speci... 139 4.8e-07 2
UNIPROTKB|Q5T3E1 - symbol:USP49 "Ubiquitin carboxyl-termi... 145 7.3e-07 1
UNIPROTKB|Q70CQ1 - symbol:USP49 "Ubiquitin carboxyl-termi... 145 9.2e-07 1
UNIPROTKB|Q5JV78 - symbol:USP45 "Ubiquitin carboxyl-termi... 128 1.1e-06 1
UNIPROTKB|E1BGQ9 - symbol:USP49 "Ubiquitin carboxyl-termi... 144 1.2e-06 1
MGI|MGI:3045318 - symbol:Usp44 "ubiquitin specific peptid... 144 1.2e-06 1
MGI|MGI:2685391 - symbol:Usp49 "ubiquitin specific peptid... 143 1.5e-06 1
RGD|1310513 - symbol:Usp49 "ubiquitin specific peptidase ... 143 1.5e-06 1
UNIPROTKB|I3LRM6 - symbol:I3LRM6 "Ubiquitin carboxyl-term... 142 1.7e-06 1
UNIPROTKB|E2RP15 - symbol:USP49 "Ubiquitin carboxyl-termi... 142 1.9e-06 1
UNIPROTKB|F1RUW2 - symbol:USP49 "Ubiquitin carboxyl-termi... 142 1.9e-06 1
TAIR|locus:2074678 - symbol:AT3G11110 species:3702 "Arabi... 116 2.7e-06 1
TAIR|locus:2153654 - symbol:AT5G05910 species:3702 "Arabi... 116 2.7e-06 1
UNIPROTKB|I3LPK3 - symbol:USP45 "Uncharacterized protein"... 134 3.0e-06 1
UNIPROTKB|D6RC01 - symbol:USP45 "Ubiquitin carboxyl-termi... 134 4.8e-06 1
UNIPROTKB|C9J1C6 - symbol:RNF181 "E3 ubiquitin-protein li... 112 7.2e-06 1
UNIPROTKB|Q9P0P0 - symbol:RNF181 "E3 ubiquitin-protein li... 112 7.2e-06 1
UNIPROTKB|I3LCU7 - symbol:I3LCU7 "Uncharacterized protein... 112 7.2e-06 1
DICTYBASE|DDB_G0283917 - symbol:sir2A "UBP-type zinc fing... 134 9.8e-06 1
TAIR|locus:1009023242 - symbol:AT3G60966 "AT3G60966" spec... 110 1.2e-05 1
TAIR|locus:2207066 - symbol:AT1G72220 species:3702 "Arabi... 131 1.5e-05 1
UNIPROTKB|D6RBV3 - symbol:USP45 "HCG17265, isoform CRA_a"... 128 1.5e-05 1
TAIR|locus:2062008 - symbol:AT2G47560 species:3702 "Arabi... 125 1.6e-05 1
UNIPROTKB|E9PQP0 - symbol:USP33 "Ubiquitin carboxyl-termi... 123 1.6e-05 1
UNIPROTKB|E2QRF0 - symbol:USP45 "Ubiquitin carboxyl-termi... 134 1.7e-05 1
TAIR|locus:2028436 - symbol:AT1G49230 species:3702 "Arabi... 124 1.8e-05 1
UNIPROTKB|Q70EL2 - symbol:USP45 "Ubiquitin carboxyl-termi... 134 1.9e-05 1
UNIPROTKB|D6RAS2 - symbol:TRIM60 "Tripartite motif-contai... 108 2.0e-05 1
UNIPROTKB|B4DV65 - symbol:USP3 "cDNA FLJ60902, highly sim... 112 2.9e-05 1
TAIR|locus:2169712 - symbol:AT5G05530 species:3702 "Arabi... 120 3.5e-05 1
UNIPROTKB|F1N2E6 - symbol:TRIM34 "Uncharacterized protein... 88 4.2e-05 2
UNIPROTKB|J9P676 - symbol:USP45 "Ubiquitin carboxyl-termi... 129 6.2e-05 1
UNIPROTKB|E2QWZ1 - symbol:USP45 "Ubiquitin carboxyl-termi... 129 6.5e-05 1
UNIPROTKB|Q28CN3 - symbol:usp33 "Ubiquitin carboxyl-termi... 129 7.4e-05 1
UNIPROTKB|Q20296 - symbol:hda-6 "Histone deacetylase 6" s... 129 8.1e-05 1
WB|WBGene00018319 - symbol:hda-6 species:6239 "Caenorhabd... 129 8.1e-05 1
UNIPROTKB|A7LPD8 - symbol:hda-6 "Protein HDA-6, isoform c... 129 8.1e-05 1
TAIR|locus:505006415 - symbol:RHB1A "RING-H2 finger B1A" ... 116 8.5e-05 1
TAIR|locus:2034934 - symbol:AT1G18770 species:3702 "Arabi... 102 8.8e-05 1
UNIPROTKB|E1C214 - symbol:USP16 "Ubiquitin carboxyl-termi... 112 0.00010 2
ZFIN|ZDB-GENE-030131-731 - symbol:hmmr "hyaluronan-mediat... 127 0.00012 1
MGI|MGI:2685640 - symbol:Trim75 "tripartite motif-contain... 100 0.00013 2
UNIPROTKB|F1RHN8 - symbol:TRIM21 "Uncharacterized protein... 96 0.00014 2
RGD|1310896 - symbol:Trim6 "tripartite motif containing 6... 88 0.00014 2
TAIR|locus:2169063 - symbol:AT5G47610 species:3702 "Arabi... 111 0.00014 1
UNIPROTKB|E9PLK7 - symbol:USP33 "Ubiquitin carboxyl-termi... 100 0.00014 1
UNIPROTKB|G3MWZ9 - symbol:TRIM34 "Uncharacterized protein... 88 0.00016 2
MGI|MGI:2159711 - symbol:Usp33 "ubiquitin specific peptid... 126 0.00016 1
MGI|MGI:2137352 - symbol:Trim6 "tripartite motif-containi... 91 0.00016 2
UNIPROTKB|E2QUN1 - symbol:RNF181 "Uncharacterized protein... 107 0.00018 1
UNIPROTKB|H0Y8J5 - symbol:USP45 "Ubiquitin carboxyl-termi... 115 0.00018 1
TAIR|locus:2177866 - symbol:AT5G41430 species:3702 "Arabi... 109 0.00020 1
UNIPROTKB|Q5REG5 - symbol:USP33 "Ubiquitin carboxyl-termi... 125 0.00021 1
UNIPROTKB|K7GLC7 - symbol:LOC100738479 "Uncharacterized p... 84 0.00023 2
UNIPROTKB|F1N541 - symbol:TRIM34 "Uncharacterized protein... 84 0.00023 2
RGD|1561238 - symbol:RGD1561238 "similar to ring finger p... 98 0.00024 1
TAIR|locus:2062502 - symbol:AT2G35420 species:3702 "Arabi... 116 0.00026 1
RGD|1359698 - symbol:Rnf181 "ring finger protein 181" spe... 109 0.00026 1
UNIPROTKB|Q6AXU4 - symbol:Rnf181 "E3 ubiquitin-protein li... 109 0.00026 1
TAIR|locus:4515102621 - symbol:ATL1F species:3702 "Arabid... 118 0.00028 1
POMBASE|SPBC6B1.06c - symbol:ubp14 "ubiquitin C-terminal ... 123 0.00028 1
UNIPROTKB|H0YL81 - symbol:USP3 "Ubiquitin carboxyl-termin... 97 0.00030 1
UNIPROTKB|H0YMP6 - symbol:USP3 "Ubiquitin carboxyl-termin... 97 0.00030 1
TAIR|locus:2177881 - symbol:AT5G41350 species:3702 "Arabi... 113 0.00033 1
WARNING: Descriptions of 44 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2057469 [details] [associations]
symbol:BRIZ2 "AT2G26000" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IC] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0010029 "regulation of seed
germination" evidence=IMP] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA] InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184
SMART:SM00290 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0046982 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0010029 GO:GO:0004842 GO:GO:0000151 GO:GO:0043130
EMBL:AC004747 eggNOG:NOG272422 KO:K10632 OMA:CLQRWED
InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
HOGENOM:HOG000190616 EMBL:BT015082 EMBL:BT015905 EMBL:HQ127734
IPI:IPI00657531 PIR:T02623 RefSeq:NP_001031419.1 UniGene:At.50100
ProteinModelPortal:O80996 SMR:O80996 STRING:O80996 PRIDE:O80996
EnsemblPlants:AT2G26000.2 GeneID:817141 KEGG:ath:AT2G26000
TAIR:At2g26000 PhylomeDB:O80996 ProtClustDB:CLSN2681167
ArrayExpress:O80996 Genevestigator:O80996 Uniprot:O80996
Length = 479
Score = 1530 (543.6 bits), Expect = 5.5e-157, P = 5.5e-157
Identities = 274/386 (70%), Positives = 328/386 (84%)
Query: 1 MTYADFCQFCASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLE 60
MTYADFCQFC SFIQHIL+MR VR D ++++YS+LIRFDSQ+S D F+QHF G+QFNSL+
Sbjct: 71 MTYADFCQFCGSFIQHILDMRTVRNDDIENRYSILIRFDSQESTDTFFQHFRGKQFNSLD 130
Query: 61 EEVCHVLFTVDVQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSF 120
E+VC +LF +DVQFTGY+GS++H QP+ A EQP+CPVCLERLDQDT GILTT+CNHSF
Sbjct: 131 EDVCRLLFALDVQFTGYSGSIDHTQPSAAGPIEQPTCPVCLERLDQDTGGILTTMCNHSF 190
Query: 121 HCSCISKWTDSSCPVCRYCQQQPEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHW 180
HCSCIS W DSSCPVCRYCQQQPE S+C VCQT+ENLWMCVICG VGCGRYK GHA HW
Sbjct: 191 HCSCISNWPDSSCPVCRYCQQQPENSVCCVCQTTENLWMCVICGVVGCGRYKEGHARRHW 250
Query: 181 KETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDSG 240
+ETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSH KD CGSC+ DSG
Sbjct: 251 EETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHGSLSKDGCGSCEYSDSG 310
Query: 241 TSDALLSSKVEAIVNEYNELLAAQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQ 300
+DALL+SKV+ I++EYNELL AQLENQK Y+E LLQ KEETE+ ISEA KAI+Q+LQ
Sbjct: 311 MTDALLNSKVDMIISEYNELLQAQLENQKQYFEKLLQNVKEETEQKISEAASKAISQRLQ 370
Query: 301 KMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLR 360
K+Q + DRCV+EK+FL+DLNENL+KN+++W KI+E++EREK A+RAKD+KIQ E QL
Sbjct: 371 KLQTRFDRCVKEKQFLEDLNENLVKNKDVWSTKITEMKEREKKAVRAKDEKIQGLEEQLG 430
Query: 361 DLMAYLEAEKTLQQLSISNEIKDGTV 386
+LMA ++ E ++S + E++D TV
Sbjct: 431 NLMAQMDGES---EVSETKEVQDATV 453
>TAIR|locus:2060045 [details] [associations]
symbol:BRIZ1 "AT2G42160" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IC] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010029 "regulation of seed germination"
evidence=IMP] [GO:0046982 "protein heterodimerization activity"
evidence=IDA] InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
EMBL:CP002685 GO:GO:0046872 GO:GO:0008270 GO:GO:0016787
GO:GO:0046982 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029
GO:GO:0004842 GO:GO:0000151 KO:K10632 InterPro:IPR011422
Pfam:PF07576 ProDom:PD017029 OMA:CDHSFQC EMBL:HQ127733
IPI:IPI00541428 RefSeq:NP_181746.2 UniGene:At.42743
UniGene:At.42745 ProteinModelPortal:E5KGE0 SMR:E5KGE0 PRIDE:E5KGE0
EnsemblPlants:AT2G42160.1 GeneID:818816 KEGG:ath:AT2G42160
Uniprot:E5KGE0
Length = 488
Score = 1110 (395.8 bits), Expect = 1.8e-112, P = 1.8e-112
Identities = 196/389 (50%), Positives = 278/389 (71%)
Query: 5 DFCQFCASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLEEEVC 64
DF +FC S I + ++ +R DGM+D+YSVLI F Q AD FY + NG++F E EVC
Sbjct: 85 DFIRFCDSRISQVSDILFIRNDGMEDRYSVLITFSDQSEADGFYNNLNGKKFAPSEAEVC 144
Query: 65 HVLFTVDVQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSC 124
H+L+ + V+ T + E AP TE P+CP+CLERLD DTSGI++T+C+HSF CSC
Sbjct: 145 HILYVMSVEHTEFD---EVAAEAPTGFTELPTCPICLERLDPDTSGIVSTLCDHSFQCSC 201
Query: 125 ISKWTDSSCPVCRYCQQQPEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETE 184
SKWT SC VCR CQQQ E C +C +EN+W C++CGFVGCGRYK GH+I HWKET
Sbjct: 202 TSKWTYLSCQVCRLCQQQDEILNCSICGKTENVWACLVCGFVGCGRYKEGHSIRHWKETH 261
Query: 185 HCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCV-DSGTSD 243
HCYSL+L TQ++WDY GD+YVHRL SK DGK VE+++ CL + +CG C+C D+G S
Sbjct: 262 HCYSLDLRTQQIWDYVGDSYVHRLNHSKIDGKSVEMSTSCLSHQGDCGLCECSEDTGISG 321
Query: 244 ALLSSKVEAIVNEYNELLAAQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQ 303
A+ +SKV++IV EYN+LLA+QL+ Q+ YYE+L+ EA+ + E I+EAV++ + +Q++Q
Sbjct: 322 AIFNSKVDSIVIEYNDLLASQLKGQRQYYESLIVEARSKQESSIAEAVEQIVVNTMQELQ 381
Query: 304 AKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLRDLM 363
K+++C EK + ++N L+K Q+ W+ K EIEERE L +KD+ I D + Q+RD+
Sbjct: 382 NKIEKCEEEKSGITEVNTKLIKEQDTWRKKAKEIEEREAALLGSKDEMITDLQEQIRDIT 441
Query: 364 AYLEAEKTLQQLSISNE-IKDGTVLPMSV 391
++EA+KTL+++S + I++GTVLP+ +
Sbjct: 442 VFIEAKKTLKKMSSDTDGIREGTVLPVPI 470
>DICTYBASE|DDB_G0270200 [details] [associations]
symbol:DDB_G0270200 "BRCA1-associated protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184
SMART:SM00290 dictyBase:DDB_G0270200 EMBL:AAFI02000005
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:NOG272422 KO:K10632 InterPro:IPR011422 Pfam:PF07576
ProDom:PD017029 OMA:CLDRLDS RefSeq:XP_646613.1
ProteinModelPortal:Q55C68 EnsemblProtists:DDB0190874 GeneID:8617585
KEGG:ddi:DDB_G0270200 InParanoid:Q55C68 ProtClustDB:CLSZ2497295
Uniprot:Q55C68
Length = 687
Score = 644 (231.8 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 140/303 (46%), Positives = 195/303 (64%)
Query: 82 EHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWT-DSSCPVCRYCQ 140
+ +Q P +S E P+CPVCL+RLD ++SGI+T +C+HSFHC C+SKW D++CPVCRY Q
Sbjct: 373 QQIQ-TPINSIELPNCPVCLDRLDSNSSGIVTVLCHHSFHCDCLSKWKGDNTCPVCRYVQ 431
Query: 141 QQ--PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWD 198
KS+C CQ++E+LW+C+ICG VGC RY HA H++ET H ++LELETQRVWD
Sbjct: 432 VPIVESKSVCSTCQSTESLWICIICGQVGCSRYVNSHANQHYQETMHTFALELETQRVWD 491
Query: 199 YAGDNYVHRLIQSKTDGKLVEL-NSHCLHGKDNCGSCDCVDSGTSDALLSSKVEAIVNEY 257
YAGD YVHRLIQ++TDGK++E N H S D D G+ L K+E+IV EY
Sbjct: 492 YAGDGYVHRLIQNRTDGKVMEFPNPH--------QSSDTRD-GSH--LKEEKIESIVMEY 540
Query: 258 NELLAAQLENQKIYYETLLQEA-KEETEKI--ISEAVKKAIAQ---KLQKMQAKLDRCVR 311
N LL +QLE Q+ Y+E L+ + KE + +I + E ++K ++ KL K + K D +
Sbjct: 541 NFLLTSQLEQQRAYFEQLINKIEKEHSYRINQLKEDIEKNNSKWQLKLLKQKQKGDDGGK 600
Query: 312 EKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLRDLMAYLEAEKT 371
E FL +N L +NQE +K + EE KD I++ +LRDL ++EA+KT
Sbjct: 601 ETTFLKQINSALKENQEKFK----QTEEE-------KDKTIENLSEELRDLRFFIEAQKT 649
Query: 372 LQQ 374
L +
Sbjct: 650 LSE 652
Score = 158 (60.7 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 35/94 (37%), Positives = 51/94 (54%)
Query: 1 MTYADFCQFCASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLE 60
M+ D F S I++M+I+R D ++Y VL+R Q SAD+FYQ FNG+ F+S E
Sbjct: 256 MSIPDLIGFFHSSCDFIIDMKIIR-DSSPNKYMVLLRLKDQISADEFYQLFNGKNFSSFE 314
Query: 61 EEVCHVLFTVDVQFTGYTGSLEHVQPAPASSTEQ 94
E C +LF V+F + + QP +Q
Sbjct: 315 PETCCLLFISKVEFQAISPNYHLFQPKQQQQQQQ 348
Score = 39 (18.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 280 KEETE-KIISEAVKKAIAQKLQKMQAKLDRCV-------REKKFLDDLNENLLKNQEMWK 331
KE T K I+ A+K+ +K ++ + + D+ + R+ +F + + L +N EM
Sbjct: 600 KETTFLKQINSALKEN-QEKFKQTEEEKDKTIENLSEELRDLRFFIEAQKTLSENHEMKD 658
Query: 332 AKI 334
A I
Sbjct: 659 ATI 661
>UNIPROTKB|F1NJH4 [details] [associations]
symbol:BRAP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR011422
Pfam:PF07576 ProDom:PD017029 GeneTree:ENSGT00500000044909
EMBL:AADN02034921 IPI:IPI00810579 Ensembl:ENSGALT00000007407
ArrayExpress:F1NJH4 Uniprot:F1NJH4
Length = 556
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 160/402 (39%), Positives = 244/402 (60%)
Query: 1 MTYADFCQFCASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLE 60
MT D +F ASF + I M+I+R D +QY VLI+F SQ AD FY NGRQFNS+E
Sbjct: 137 MTSHDLMKFVASFYEVIEHMKIIR-DSTPNQYMVLIKFSSQADADSFYMACNGRQFNSIE 195
Query: 61 EEVCHVLFTVDVQ-FTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHS 119
E+VC +++ + F G+ V TE P C VCLER+D+ +GILTT+CNHS
Sbjct: 196 EDVCQLVYVERAEVFKSEDGASLPVMDL----TELPKCTVCLERMDESVNGILTTLCNHS 251
Query: 120 FHCSCISKWTDSSCPVCRYCQQ-QP-EKSICFVCQTSENLWMCVICGFVGCGRYKGGHAI 177
FH C+ +W D++CPVCRYCQ +P E++ CF C ENLW+C+ICG +GCGRY HA
Sbjct: 252 FHSQCLQRWEDTTCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAY 311
Query: 178 IHWKETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCV 237
H++ET+H Y+++L RVWDYAGDNYVHRL+ SKTDGK+V+ C G D C + +
Sbjct: 312 KHFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKIVQYE--C-EG-DMCQE-EKI 366
Query: 238 DSGTSDA--LLSSKVEAI-VNEYNELL------AAQLENQKIYYETLLQEAKEETEKIIS 288
D+ + LL+S++E+ + N+++ A ++ N K ++ +++ + E+ ++
Sbjct: 367 DALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEINNMKTKFKETIEKC-DSLEQRLN 425
Query: 289 EAVKK--AIAQKLQKMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALR 346
+ +K+ ++ +K ++ K+ + E K +LN+ L NQ + + K+ E E K
Sbjct: 426 DLLKEKQSVERKCSQLNNKVAKLSNELKEEQELNKCLRANQALLQNKLKEEERVLKETCE 485
Query: 347 AKDDKIQDSEAQLRDLMAYLEAEKTLQQLSISN--EIKDGTV 386
KD +I + + QLRD+M YLE ++ + L EI++G +
Sbjct: 486 QKDLQISEIQEQLRDVMFYLETQQKINHLPAETRQEIQEGQI 527
>UNIPROTKB|F1NR06 [details] [associations]
symbol:BRAP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000165 "MAPK cascade" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007265 "Ras protein
signal transduction" evidence=IEA] [GO:0008139 "nuclear
localization sequence binding" evidence=IEA] [GO:0009968 "negative
regulation of signal transduction" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
GO:GO:0005737 GO:GO:0000165 GO:GO:0007265 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0009968
OMA:CLQRWED GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576
ProDom:PD017029 GeneTree:ENSGT00500000044909 EMBL:AADN02034921
IPI:IPI00820070 Ensembl:ENSGALT00000039032 ArrayExpress:F1NR06
Uniprot:F1NR06
Length = 585
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 160/402 (39%), Positives = 244/402 (60%)
Query: 1 MTYADFCQFCASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLE 60
MT D +F ASF + I M+I+R D +QY VLI+F SQ AD FY NGRQFNS+E
Sbjct: 166 MTSHDLMKFVASFYEVIEHMKIIR-DSTPNQYMVLIKFSSQADADSFYMACNGRQFNSIE 224
Query: 61 EEVCHVLFTVDVQ-FTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHS 119
E+VC +++ + F G+ V TE P C VCLER+D+ +GILTT+CNHS
Sbjct: 225 EDVCQLVYVERAEVFKSEDGASLPVMDL----TELPKCTVCLERMDESVNGILTTLCNHS 280
Query: 120 FHCSCISKWTDSSCPVCRYCQQ-QP-EKSICFVCQTSENLWMCVICGFVGCGRYKGGHAI 177
FH C+ +W D++CPVCRYCQ +P E++ CF C ENLW+C+ICG +GCGRY HA
Sbjct: 281 FHSQCLQRWEDTTCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAY 340
Query: 178 IHWKETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCV 237
H++ET+H Y+++L RVWDYAGDNYVHRL+ SKTDGK+V+ C G D C + +
Sbjct: 341 KHFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKIVQYE--C-EG-DMCQE-EKI 395
Query: 238 DSGTSDA--LLSSKVEAI-VNEYNELL------AAQLENQKIYYETLLQEAKEETEKIIS 288
D+ + LL+S++E+ + N+++ A ++ N K ++ +++ + E+ ++
Sbjct: 396 DALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEINNMKTKFKETIEKC-DSLEQRLN 454
Query: 289 EAVKK--AIAQKLQKMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALR 346
+ +K+ ++ +K ++ K+ + E K +LN+ L NQ + + K+ E E K
Sbjct: 455 DLLKEKQSVERKCSQLNNKVAKLSNELKEEQELNKCLRANQALLQNKLKEEERVLKETCE 514
Query: 347 AKDDKIQDSEAQLRDLMAYLEAEKTLQQLSISN--EIKDGTV 386
KD +I + + QLRD+M YLE ++ + L EI++G +
Sbjct: 515 QKDLQISEIQEQLRDVMFYLETQQKINHLPAETRQEIQEGQI 556
>UNIPROTKB|F1PGI5 [details] [associations]
symbol:BRAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0009968 "negative regulation of signal
transduction" evidence=IEA] [GO:0008139 "nuclear localization
sequence binding" evidence=IEA] [GO:0007265 "Ras protein signal
transduction" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000165 "MAPK cascade" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001607 InterPro:IPR012677
Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271
SMART:SM00184 SMART:SM00290 GO:GO:0005737 GO:GO:0000165
GO:GO:0007265 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 GO:GO:0009968 CTD:8315 KO:K10632
OMA:CLQRWED GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576
ProDom:PD017029 GeneTree:ENSGT00500000044909 EMBL:AAEX03014674
RefSeq:XP_543397.3 Ensembl:ENSCAFT00000013670 GeneID:486271
KEGG:cfa:486271 Uniprot:F1PGI5
Length = 592
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 156/401 (38%), Positives = 243/401 (60%)
Query: 1 MTYADFCQFCASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLE 60
MT D +F A F + I +M+I+R D +QY VLI+F +Q AD FY NGRQFNS+E
Sbjct: 172 MTSHDLMKFVAPFNEVIEQMKIIR-DSTPNQYMVLIKFSAQADADSFYMACNGRQFNSIE 230
Query: 61 EEVCHVLFTVDVQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSF 120
++VC +++ V+ S + TE P C VCLER+D+ +GILTT+CNHSF
Sbjct: 231 DDVCQLVY---VERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSF 287
Query: 121 HCSCISKWTDSSCPVCRYCQQ-QP-EKSICFVCQTSENLWMCVICGFVGCGRYKGGHAII 178
H C+ +W D++CPVCRYCQ +P E++ CF C ENLW+C+ICG +GCGRY HA
Sbjct: 288 HSQCLQRWDDTTCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYK 347
Query: 179 HWKETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVD 238
H++ET+H Y+++L RVWDYAGDNYVHRL+ SKTDGK+V+ C G D C + +D
Sbjct: 348 HFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKIVQYE--C-EG-DTCQE-EKID 402
Query: 239 SGTSDA--LLSSKVEAI-VNEYNELL------AAQLENQKIYYETLLQEAKEETEKIISE 289
+ + LL+S++E+ + N+++ A ++ N K ++ +++ + E +++
Sbjct: 403 ALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEINNMKTKFKETIEKC-DNLEHRLND 461
Query: 290 AVKK--AIAQKLQKMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRA 347
+K+ ++ +K ++ K+ + E K ++N+ L NQ + + K+ E E K
Sbjct: 462 LLKEKQSVERKCTQLNMKVAKLTTELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQ 521
Query: 348 KDDKIQDSEAQLRDLMAYLEAEKTLQQLSISN--EIKDGTV 386
KD +I + + QLRD+M YLEA++ + L EI++G +
Sbjct: 522 KDLQITEIQEQLRDVMFYLEAQQKINHLPAETRQEIQEGQI 562
>ZFIN|ZDB-GENE-040718-168 [details] [associations]
symbol:brap "BRCA1 associated protein" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001607
InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50271 SMART:SM00184 SMART:SM00290
ZFIN:ZDB-GENE-040718-168 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 Gene3D:3.30.40.10 InterPro:IPR013083 CTD:8315
eggNOG:NOG272422 HOVERGEN:HBG050729 KO:K10632 OrthoDB:EOG4HHP1Z
InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
HOGENOM:HOG000190616 EMBL:BC076350 IPI:IPI00491025
RefSeq:NP_001002466.1 UniGene:Dr.80255 ProteinModelPortal:Q6DGJ4
STRING:Q6DGJ4 PRIDE:Q6DGJ4 GeneID:436739 KEGG:dre:436739
InParanoid:Q6DGJ4 NextBio:20831178 ArrayExpress:Q6DGJ4 Bgee:Q6DGJ4
Uniprot:Q6DGJ4
Length = 578
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 155/401 (38%), Positives = 241/401 (60%)
Query: 1 MTYADFCQFCASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLE 60
MT D +F A + + M+I+R D +QY VL++F SQ AD FY NGRQFNS+E
Sbjct: 156 MTSHDLMKFVAPYNDVMEHMKIIR-DSTPNQYMVLVKFRSQADADSFYTTRNGRQFNSIE 214
Query: 61 EEVCHVLFTVDVQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSF 120
+ VC +++ V+ S E TE P C VCLER+D+ +G+LTT+CNHSF
Sbjct: 215 DAVCQLVY---VERAEVIKSEEGASLPVMDLTELPKCTVCLERMDESVNGVLTTLCNHSF 271
Query: 121 HCSCISKWTDSSCPVCRYCQQ-QP-EKSICFVCQTSENLWMCVICGFVGCGRYKGGHAII 178
H C+ +W D+SCPVCRYCQ +P E++ CF C ENLW+C+ICG +GCGRY HA
Sbjct: 272 HSQCLQRWEDASCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYK 331
Query: 179 HWKETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVD 238
H++ET+H Y+++L RVWDYAGDNYVHRL+ SKTDGK+V+ C G D C + +D
Sbjct: 332 HFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKMVQYE--C-EG-DTCQD-EKID 386
Query: 239 SGTSDA--LLSSKVEAI-VNEYNELL------AAQLENQKIYYETLLQEAKEETEKIISE 289
+ + LL+S++E+ + N+++ A ++ N K ++ + + + E+ ++E
Sbjct: 387 ALQLEYSYLLTSQLESQRIYWENKIVHLEKDTAEEINNMKAKFKETIDKC-DSLERKLNE 445
Query: 290 AVK--KAIAQKLQKMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRA 347
K ++I +K ++ K+ + +E + ++N L NQ +A++ E E R +
Sbjct: 446 LAKDKQSIDKKCSQLNNKVAKLSQELREEQEMNRCLRANQSQLQAQLQEEERRVQDTAAN 505
Query: 348 KDDKIQDSEAQLRDLMAYLEAEKTLQQLSISN--EIKDGTV 386
KDD+I + + QLRD+M YLE ++ + ++ EI++G +
Sbjct: 506 KDDQIAELQEQLRDVMFYLETQQQIDRMPADTRQEIQEGQI 546
>UNIPROTKB|A6H716 [details] [associations]
symbol:BRAP "BRAP protein" species:9913 "Bos taurus"
[GO:0009968 "negative regulation of signal transduction"
evidence=IEA] [GO:0008139 "nuclear localization sequence binding"
evidence=IEA] [GO:0007265 "Ras protein signal transduction"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000165 "MAPK
cascade" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
GO:GO:0005737 GO:GO:0000165 GO:GO:0007265 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0009968
CTD:8315 eggNOG:NOG272422 HOVERGEN:HBG050729 KO:K10632 OMA:CLQRWED
OrthoDB:EOG4HHP1Z GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576
ProDom:PD017029 GeneTree:ENSGT00500000044909 HOGENOM:HOG000190616
EMBL:DAAA02045293 EMBL:BC146079 IPI:IPI00854454
RefSeq:NP_001092478.1 UniGene:Bt.103041 STRING:A6H716
Ensembl:ENSBTAT00000001552 GeneID:518844 KEGG:bta:518844
InParanoid:A6H716 NextBio:20872746 Uniprot:A6H716
Length = 592
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 156/401 (38%), Positives = 242/401 (60%)
Query: 1 MTYADFCQFCASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLE 60
MT D +F A F + I +M+I+R D +QY VLI+F +Q AD FY NGRQFNS+E
Sbjct: 172 MTSHDLMKFVAPFNEVIEQMKIIR-DSTPNQYMVLIKFSAQADADSFYMACNGRQFNSIE 230
Query: 61 EEVCHVLFTVDVQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSF 120
++VC +++ V+ S + TE P C VCLER+D+ +GILTT+CNHSF
Sbjct: 231 DDVCQLVY---VERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSF 287
Query: 121 HCSCISKWTDSSCPVCRYCQQ-QP-EKSICFVCQTSENLWMCVICGFVGCGRYKGGHAII 178
H C+ +W D++CPVCRYCQ +P E++ CF C ENLW+C+ICG +GCGRY HA
Sbjct: 288 HSQCLQRWDDTTCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYK 347
Query: 179 HWKETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVD 238
H++ET+H Y+++L RVWDYAGDNYVHRL+ SKTDGKLV+ C G D C + +D
Sbjct: 348 HFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKLVQYE--C-EG-DTCQE-EKID 402
Query: 239 SGTSDA--LLSSKVEAI-VNEYNELL------AAQLENQKIYYETLLQEAKEETEKIISE 289
+ + LL+S++E+ + N+++ A ++ N K ++ +++ + E +++
Sbjct: 403 ALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEINNMKTKFKETIEKC-DSLEHRLND 461
Query: 290 AVKK--AIAQKLQKMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRA 347
+K+ ++ +K ++ K+ + E K ++N+ L NQ + + K+ E E K
Sbjct: 462 LLKEKQSVERKCTQLNTKVAKLTTELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQ 521
Query: 348 KDDKIQDSEAQLRDLMAYLEAEKTLQQLSISN--EIKDGTV 386
KD +I + + QLRD+M YLE ++ + L EI++G +
Sbjct: 522 KDLQITEIQEQLRDVMFYLETQQKINHLPAETRQEIQEGQI 562
>UNIPROTKB|J3KNN7 [details] [associations]
symbol:BRAP "BRCA1-associated protein" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
EMBL:AC002996 Gene3D:3.30.40.10 InterPro:IPR013083 HGNC:HGNC:1099
ChiTaRS:BRAP InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
EMBL:AC137055 ProteinModelPortal:J3KNN7 Ensembl:ENST00000327551
Uniprot:J3KNN7
Length = 562
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 155/401 (38%), Positives = 242/401 (60%)
Query: 1 MTYADFCQFCASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLE 60
MT D +F A F + I +M+I+R D +QY VLI+F +Q AD FY NGRQFNS+E
Sbjct: 142 MTSHDLMKFVAPFNEVIEQMKIIR-DSTPNQYMVLIKFRAQADADSFYMTCNGRQFNSIE 200
Query: 61 EEVCHVLFTVDVQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSF 120
++VC +++ V+ S + TE P C VCLER+D+ +GILTT+CNHSF
Sbjct: 201 DDVCQLVY---VERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSF 257
Query: 121 HCSCISKWTDSSCPVCRYCQQ-QP-EKSICFVCQTSENLWMCVICGFVGCGRYKGGHAII 178
H C+ +W D++CPVCRYCQ +P E++ CF C ENLW+C+ICG +GCGRY HA
Sbjct: 258 HSQCLQRWDDTTCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYK 317
Query: 179 HWKETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVD 238
H++ET+H Y+++L RVWDYAGDNYVHRL+ SKTDGK+V+ C G D C + +D
Sbjct: 318 HFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKIVQYE--C-EG-DTCQE-EKID 372
Query: 239 SGTSDA--LLSSKVEAI-VNEYNELL------AAQLENQKIYYETLLQEAKEETEKIISE 289
+ + LL+S++E+ + N+++ A ++ N K ++ +++ + E +++
Sbjct: 373 ALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEINNMKTKFKETIEKC-DNLEHKLND 431
Query: 290 AVKK--AIAQKLQKMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRA 347
+K+ ++ +K ++ K+ + E K ++N+ L NQ + + K+ E E K
Sbjct: 432 LLKEKQSVERKCTQLNTKVAKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQ 491
Query: 348 KDDKIQDSEAQLRDLMAYLEAEKTLQQLSISN--EIKDGTV 386
KD +I + + QLRD+M YLE ++ + L EI++G +
Sbjct: 492 KDLQITEIQEQLRDVMFYLETQQKINHLPAETRQEIQEGQI 532
>UNIPROTKB|Q7Z569 [details] [associations]
symbol:BRAP "BRCA1-associated protein" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009968 "negative regulation
of signal transduction" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000151 "ubiquitin ligase complex"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=IDA] [GO:0007265
"Ras protein signal transduction" evidence=IDA] [GO:0008139
"nuclear localization sequence binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0000165
GO:GO:0007265 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 EMBL:CH471054 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0009968
EMBL:AF035620 EMBL:AY332222 EMBL:BC136698 EMBL:BC136699
EMBL:AF035950 IPI:IPI00396089 RefSeq:NP_006759.3 UniGene:Hs.530940
ProteinModelPortal:Q7Z569 SMR:Q7Z569 IntAct:Q7Z569 STRING:Q7Z569
PhosphoSite:Q7Z569 DMDM:296434410 PaxDb:Q7Z569 PRIDE:Q7Z569
Ensembl:ENST00000419234 GeneID:8315 KEGG:hsa:8315 UCSC:uc001tsn.4
CTD:8315 GeneCards:GC12M112080 H-InvDB:HIX0036684 HGNC:HGNC:1099
HPA:HPA040357 MIM:604986 neXtProt:NX_Q7Z569 PharmGKB:PA25410
eggNOG:NOG272422 HOVERGEN:HBG050729 InParanoid:Q7Z569 KO:K10632
OMA:CLQRWED OrthoDB:EOG4HHP1Z PhylomeDB:Q7Z569 ChiTaRS:BRAP
GenomeRNAi:8315 NextBio:31141 ArrayExpress:Q7Z569 Bgee:Q7Z569
CleanEx:HS_BRAP Genevestigator:Q7Z569 GermOnline:ENSG00000089234
GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
Uniprot:Q7Z569
Length = 592
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 155/401 (38%), Positives = 242/401 (60%)
Query: 1 MTYADFCQFCASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLE 60
MT D +F A F + I +M+I+R D +QY VLI+F +Q AD FY NGRQFNS+E
Sbjct: 172 MTSHDLMKFVAPFNEVIEQMKIIR-DSTPNQYMVLIKFRAQADADSFYMTCNGRQFNSIE 230
Query: 61 EEVCHVLFTVDVQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSF 120
++VC +++ V+ S + TE P C VCLER+D+ +GILTT+CNHSF
Sbjct: 231 DDVCQLVY---VERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSF 287
Query: 121 HCSCISKWTDSSCPVCRYCQQ-QP-EKSICFVCQTSENLWMCVICGFVGCGRYKGGHAII 178
H C+ +W D++CPVCRYCQ +P E++ CF C ENLW+C+ICG +GCGRY HA
Sbjct: 288 HSQCLQRWDDTTCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYK 347
Query: 179 HWKETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVD 238
H++ET+H Y+++L RVWDYAGDNYVHRL+ SKTDGK+V+ C G D C + +D
Sbjct: 348 HFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKIVQYE--C-EG-DTCQE-EKID 402
Query: 239 SGTSDA--LLSSKVEAI-VNEYNELL------AAQLENQKIYYETLLQEAKEETEKIISE 289
+ + LL+S++E+ + N+++ A ++ N K ++ +++ + E +++
Sbjct: 403 ALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEINNMKTKFKETIEKC-DNLEHKLND 461
Query: 290 AVKK--AIAQKLQKMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRA 347
+K+ ++ +K ++ K+ + E K ++N+ L NQ + + K+ E E K
Sbjct: 462 LLKEKQSVERKCTQLNTKVAKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQ 521
Query: 348 KDDKIQDSEAQLRDLMAYLEAEKTLQQLSISN--EIKDGTV 386
KD +I + + QLRD+M YLE ++ + L EI++G +
Sbjct: 522 KDLQITEIQEQLRDVMFYLETQQKINHLPAETRQEIQEGQI 562
>MGI|MGI:1919649 [details] [associations]
symbol:Brap "BRCA1 associated protein" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
[GO:0000165 "MAPK cascade" evidence=ISO] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0007265 "Ras protein signal transduction" evidence=ISO]
[GO:0008139 "nuclear localization sequence binding" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009968 "negative
regulation of signal transduction" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001607
InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50271 SMART:SM00184 SMART:SM00290 UniPathway:UPA00143
MGI:MGI:1919649 Prosite:PS00518 GO:GO:0005737 GO:GO:0000165
GO:GO:0007265 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 GO:GO:0009968 CTD:8315 eggNOG:NOG272422
HOVERGEN:HBG050729 KO:K10632 OMA:CLQRWED OrthoDB:EOG4HHP1Z
GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
EMBL:AF321920 EMBL:AF321921 EMBL:BC038490 EMBL:AK013885
EMBL:AK034212 IPI:IPI00117933 IPI:IPI00453542 IPI:IPI00453543
RefSeq:NP_082503.2 UniGene:Mm.153372 ProteinModelPortal:Q99MP8
SMR:Q99MP8 STRING:Q99MP8 PhosphoSite:Q99MP8 PaxDb:Q99MP8
PRIDE:Q99MP8 Ensembl:ENSMUST00000031414 Ensembl:ENSMUST00000111765
Ensembl:ENSMUST00000127703 GeneID:72399 KEGG:mmu:72399
UCSC:uc008zkc.1 UCSC:uc008zkd.1 GeneTree:ENSGT00500000044909
HOGENOM:HOG000190616 InParanoid:Q99MP8 NextBio:336190 Bgee:Q99MP8
CleanEx:MM_BRAP Genevestigator:Q99MP8 GermOnline:ENSMUSG00000029458
Uniprot:Q99MP8
Length = 591
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 154/401 (38%), Positives = 242/401 (60%)
Query: 1 MTYADFCQFCASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLE 60
MT D +F A F I +M+I+R D +QY VLI+F +Q AD FY NGRQFNS+E
Sbjct: 171 MTSHDLMKFVAPFNDVIEQMKIIR-DSTPNQYMVLIKFSAQADADSFYMACNGRQFNSIE 229
Query: 61 EEVCHVLFTVDVQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSF 120
++VC +++ V+ S + TE P C VCLER+D+ +GILTT+CNHSF
Sbjct: 230 DDVCQLVY---VERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSF 286
Query: 121 HCSCISKWTDSSCPVCRYCQQ-QP-EKSICFVCQTSENLWMCVICGFVGCGRYKGGHAII 178
H C+ +W D++CPVCRYCQ +P E++ CF C ENLW+C+ICG +GCGRY HA
Sbjct: 287 HSQCLQRWDDTTCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYK 346
Query: 179 HWKETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVD 238
H++ET+H Y+++L RVWDYAGDNYVHRL+ SKTDGK+V+ C G D C + +D
Sbjct: 347 HFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKIVQYE--C-EG-DTCQE-EKID 401
Query: 239 SGTSDA--LLSSKVEAI-VNEYNELL------AAQLENQKIYYETLLQEAKEETEKIISE 289
+ + LL+S++E+ + N+++ A ++ N K ++ +++ + E +S+
Sbjct: 402 ALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEINNMKTKFKETIEKC-DSLELRLSD 460
Query: 290 AVKK--AIAQKLQKMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRA 347
+K+ ++ +K ++ ++ + E + +LN+ L NQ + + ++ E E+ K
Sbjct: 461 LLKEKQSVERKCTQLNTRVAKLSTELQEEQELNKCLRANQLVLQNQLKEEEKLLKETCAQ 520
Query: 348 KDDKIQDSEAQLRDLMAYLEAEKTLQQLSISN--EIKDGTV 386
KD +I + + QLRD+M YLE ++ + L EI++G +
Sbjct: 521 KDLQITEIQEQLRDVMFYLETQQQISHLPAETRQEIQEGQI 561
>FB|FBgn0038686 [details] [associations]
symbol:CG5555 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50271 SMART:SM00184 SMART:SM00290 EMBL:AE014297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
KO:K10632 OMA:CLQRWED InterPro:IPR011422 Pfam:PF07576
ProDom:PD017029 GeneTree:ENSGT00500000044909 eggNOG:COG5207
EMBL:AY047557 RefSeq:NP_650789.1 UniGene:Dm.4649 SMR:Q9VDZ1
IntAct:Q9VDZ1 MINT:MINT-759759 STRING:Q9VDZ1
EnsemblMetazoa:FBtr0083746 GeneID:42302 KEGG:dme:Dmel_CG5555
UCSC:CG5555-RA FlyBase:FBgn0038686 InParanoid:Q9VDZ1
OrthoDB:EOG4R7SS3 GenomeRNAi:42302 NextBio:828132 Uniprot:Q9VDZ1
Length = 555
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 148/392 (37%), Positives = 236/392 (60%)
Query: 5 DFCQFCASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLE-EEV 63
+F C + I+HI +IVR DG +Q+ VL+ F S +SA +FY+ +NG +NSLE + +
Sbjct: 166 NFIAPCHAEIKHI---QIVR-DGSPNQFMVLLEFRSNESALEFYKSYNGSTYNSLEPDSL 221
Query: 64 CHVLFTVDVQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCS 123
CH ++ +V+ + EH P P TE P+CPVCLER+D+ G+LT +CNH+FH S
Sbjct: 222 CHAVWVSEVERS------EHGAP-PMGHTELPTCPVCLERMDESVDGVLTILCNHAFHAS 274
Query: 124 CISKWTDSSCPVCRYCQQQP--EKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWK 181
C+ KW DS+CPVCR+ Q E S+C C+ +++LW+C+ICG VGCGRY+GGHA H++
Sbjct: 275 CLMKWGDSTCPVCRHVQTPGLVEDSVCMECEGTDSLWICLICGHVGCGRYQGGHAAAHFR 334
Query: 182 ETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDSGT 241
T H ++++L T VWDYAGDN+VHRL Q+K+DGKLV + KD + +DS
Sbjct: 335 ATNHTFAMQLGTSSVWDYAGDNFVHRLFQNKSDGKLVASQTE----KDERE--EKIDSMQ 388
Query: 242 SDA--LLSSKVEAIVNEYNELLAAQLENQKIYYETLLQEAKEETEKI--ISEAVKKA--- 294
+ LL+S+++ Y E + +LE + ++ +AK E ++ + + ++K
Sbjct: 389 MEFTYLLTSQLDTQRKYYEERME-RLEQEWQNHKATANDAKTEVSELQQLQQNMQKEKVN 447
Query: 295 IAQKLQKMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQD 354
+ +KL + AKL ++ +L++ L NQ W K +E++ + D ++ +
Sbjct: 448 LERKLAQHTAKLKDVQKQLNEERELSKALQSNQSSWHGKYKLLEQQYNEFKQTHDAEVTE 507
Query: 355 SEAQLRDLMAYLEAEKTLQQLSISNEIKDGTV 386
+ QLRD+M +L+ + Q+L+ + EI GTV
Sbjct: 508 LKEQLRDIMFFLDNQ---QKLA-NTEIAGGTV 535
>UNIPROTKB|B4DRM1 [details] [associations]
symbol:BRAP "cDNA FLJ50182, highly similar to
BRCA1-associated protein (EC 6.3.2.-)" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50271 SMART:SM00184 SMART:SM00290 GO:GO:0046872
GO:GO:0008270 EMBL:AC002996 Gene3D:3.30.40.10 InterPro:IPR013083
UniGene:Hs.530940 HGNC:HGNC:1099 HOVERGEN:HBG050729 ChiTaRS:BRAP
InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
HOGENOM:HOG000190616 EMBL:AC137055 EMBL:AK299326 IPI:IPI00908635
SMR:B4DRM1 STRING:B4DRM1 Ensembl:ENST00000539060 UCSC:uc010syh.2
Uniprot:B4DRM1
Length = 413
Score = 589 (212.4 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 121/310 (39%), Positives = 192/310 (61%)
Query: 92 TEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDSSCPVCRYCQQ-QP-EKSICF 149
TE P C VCLER+D+ +GILTT+CNHSFH C+ +W D++CPVCRYCQ +P E++ CF
Sbjct: 80 TELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTCPVCRYCQTPEPVEENKCF 139
Query: 150 VCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGDNYVHRLI 209
C ENLW+C+ICG +GCGRY HA H++ET+H Y+++L RVWDYAGDNYVHRL+
Sbjct: 140 ECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLV 199
Query: 210 QSKTDGKLVELNSHCLHGKDNCGSCDCVDSGTSDA--LLSSKVEAI-VNEYNELL----- 261
SKTDGK+V+ C G D C + +D+ + LL+S++E+ + N+++
Sbjct: 200 ASKTDGKIVQYE--C-EG-DTCQE-EKIDALQLEYSYLLTSQLESQRIYWENKIVRIEKD 254
Query: 262 -AAQLENQKIYYETLLQEAKEETEKIISEAVKK--AIAQKLQKMQAKLDRCVREKKFLDD 318
A ++ N K ++ +++ + E +++ +K+ ++ +K ++ K+ + E K +
Sbjct: 255 TAEEINNMKTKFKETIEKC-DNLEHKLNDLLKEKQSVERKCTQLNTKVAKLTNELKEEQE 313
Query: 319 LNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLRDLMAYLEAEKTLQQLSIS 378
+N+ L NQ + + K+ E E K KD +I + + QLRD+M YLE ++ + L
Sbjct: 314 MNKCLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFYLETQQKINHLPAE 373
Query: 379 N--EIKDGTV 386
EI++G +
Sbjct: 374 TRQEIQEGQI 383
Score = 76 (31.8 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 1 MTYADFCQFCASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSA 44
MT D +F A F + I +M+I+R D +QY VLI+F +Q ++
Sbjct: 31 MTSHDLMKFVAPFNEVIEQMKIIR-DSTPNQYMVLIKFRAQGAS 73
>UNIPROTKB|F8VZK5 [details] [associations]
symbol:BRAP "BRCA1-associated protein" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 EMBL:AC002996 Gene3D:3.30.40.10
InterPro:IPR013083 HGNC:HGNC:1099 ChiTaRS:BRAP InterPro:IPR011422
Pfam:PF07576 ProDom:PD017029 EMBL:AC137055 IPI:IPI01022318
ProteinModelPortal:F8VZK5 SMR:F8VZK5 Ensembl:ENST00000547043
ArrayExpress:F8VZK5 Bgee:F8VZK5 Uniprot:F8VZK5
Length = 328
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 129/334 (38%), Positives = 205/334 (61%)
Query: 52 NGRQFNSLEEEVCHVLFTVDVQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGI 111
NGRQFNS+E++VC +++ V+ S + TE P C VCLER+D+ +GI
Sbjct: 4 NGRQFNSIEDDVCQLVY---VERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGI 60
Query: 112 LTTICNHSFHCSCISKWTDSSCPVCRYCQQ-QP-EKSICFVCQTSENLWMCVICGFVGCG 169
LTT+CNHSFH C+ +W D++CPVCRYCQ +P E++ CF C ENLW+C+ICG +GCG
Sbjct: 61 LTTLCNHSFHSQCLQRWDDTTCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCG 120
Query: 170 RYKGGHAIIHWKETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKD 229
RY HA H++ET+H Y+++L RVWDYAGDNYVHRL+ SKTDGK+V+ C G D
Sbjct: 121 RYVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKIVQYE--C-EG-D 176
Query: 230 NCGSCDCVDSGTSDA--LLSSKVEAI-VNEYNELL------AAQLENQKIYYETLLQEAK 280
C + +D+ + LL+S++E+ + N+++ A ++ N K ++ +++
Sbjct: 177 TCQE-EKIDALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEINNMKTKFKETIEKC- 234
Query: 281 EETEKIISEAVKK--AIAQKLQKMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIE 338
+ E +++ +K+ ++ +K ++ K+ + E K ++N+ L NQ + + K+ E E
Sbjct: 235 DNLEHKLNDLLKEKQSVERKCTQLNTKVAKLTNELKEEQEMNKCLRANQVLLQNKLKEEE 294
Query: 339 EREKMALRAKDDKIQDSEAQLRDLMAYLEAEKTL 372
K KD +I + + QLRD+M YLE ++ +
Sbjct: 295 RVLKETCDQKDLQITEIQEQLRDVMFYLETQQKI 328
>POMBASE|SPAC16E8.13 [details] [associations]
symbol:SPAC16E8.13 "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005829
"cytosol" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=ISM]
InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
PomBase:SPAC16E8.13 Prosite:PS00518 GO:GO:0005829 EMBL:CU329670
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 eggNOG:NOG272422 KO:K10632 InterPro:IPR011422
Pfam:PF07576 ProDom:PD017029 HOGENOM:HOG000190616 PIR:T37793
RefSeq:NP_594226.1 ProteinModelPortal:O13747 STRING:O13747
EnsemblFungi:SPAC16E8.13.1 GeneID:2542333 KEGG:spo:SPAC16E8.13
OMA:CLDRLDS OrthoDB:EOG4H75M9 NextBio:20803394 Uniprot:O13747
Length = 547
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 156/418 (37%), Positives = 231/418 (55%)
Query: 10 CASFIQHILEM------RIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLEEEV 63
C S IQHI + RI+ DQ SV IRF ++ + F Q + + L +
Sbjct: 112 CKS-IQHIRLLKTKDPNRIMALLKFKDQASV-IRFYTEFNGKAFSQ-IDPETCHVLHIDK 168
Query: 64 CHVLFTVDVQFTGYTGSLEHVQPA--PASST-----EQPSCPVCLERLDQDTSGILTTIC 116
++ + ++ + T + V P+ P +ST E P+C VCLER+D +G++T +C
Sbjct: 169 VNIKYPMESSDSSSTEQ-QLVGPSSKPFASTTPALIELPTCVVCLERMDSSITGLITIVC 227
Query: 117 NHSFHCSCISKWTDSSCPVCRYCQ--QQPE-KSICFVCQTSENLWMCVICGFVGCGRYKG 173
H+FHC C+ KW +SSCPVCRY Q Q E +S C VC ++LW+C+ICG +GCGRY
Sbjct: 228 QHTFHCPCLQKWGNSSCPVCRYTQKVQSSEFQSKCTVCCYDKDLWICLICGNIGCGRYHD 287
Query: 174 GHAIIHWKETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGS 233
HA H+ +T HCY++ELETQRVWDYAGDNYVHRL+QS+TDGKLVEL++ GK S
Sbjct: 288 AHAKQHYVDTAHCYAMELETQRVWDYAGDNYVHRLLQSETDGKLVELSTD---GK----S 340
Query: 234 CDCVDSGTSDALLSSKVEAIVNEYNELLAAQLENQKIYYETLLQEAKEETEKIISEAVKK 293
S +++ L K+ EY ++L +QLE+Q++YYE+ L ++ ++ E V K
Sbjct: 341 SGWTGSSATESKLRDKMGL---EYTQILVSQLESQRLYYESHLSNMSQKLSRVNEELVLK 397
Query: 294 A-IA-----------QKLQKMQAKL----DRCVREKKFLDDLNENLLKNQEMWKAKISEI 337
IA ++ ++KL D+ R L+ L N + + M + + I
Sbjct: 398 TKIATASSNANTDLRSRVDISESKLKKRDDKLKRVSSQLEHLKHNYEEEKSMNENLLVRI 457
Query: 338 EEREKMALRAKDD------KIQDSEAQLRDLMAYLEAEKTLQQLSISNEIKDGT-VLP 388
+ EK D +I D QLRDLM + A + +Q++ S E+++GT VLP
Sbjct: 458 QTLEKQNTTKSDQIVSMQFQINDLNEQLRDLMFTISASQEIQKMGQSEELQNGTIVLP 515
>WB|WBGene00017144 [details] [associations]
symbol:EEED8.16 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50271 SMART:SM00184 SMART:SM00290 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:NOG272422 KO:K10632 OMA:CLQRWED InterPro:IPR011422
Pfam:PF07576 ProDom:PD017029 GeneTree:ENSGT00500000044909
HOGENOM:HOG000190616 EMBL:FO081042 RefSeq:NP_495016.1
ProteinModelPortal:Q95QN6 SMR:Q95QN6 DIP:DIP-24711N IntAct:Q95QN6
MINT:MINT-1123262 STRING:Q95QN6 PaxDb:Q95QN6
EnsemblMetazoa:EEED8.16.1 EnsemblMetazoa:EEED8.16.2 GeneID:173917
KEGG:cel:CELE_EEED8.16 UCSC:EEED8.16 CTD:173917 WormBase:EEED8.16
InParanoid:Q95QN6 NextBio:881657 Uniprot:Q95QN6
Length = 590
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 131/346 (37%), Positives = 194/346 (56%)
Query: 10 CASFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLEEEVCHVLFT 69
C S + I+ +++VR D +QY ++I+F + A FY+ FN FN LE C + F
Sbjct: 178 CIS-LPMIVSIKVVR-DPAPNQYMLIIKFKEHNDAVTFYEEFNNCPFNDLESYCCTLFFV 235
Query: 70 VDVQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWT 129
++ T S + S TE P+C VCLER+D +L +CNHSFH C+ +W
Sbjct: 236 DRIECTT---SNDLFSSDDTSLTELPTCAVCLERMDDS---VLAILCNHSFHARCLEQWA 289
Query: 130 DSSCPVCRYCQQQPE---KSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHC 186
D++CPVCRY Q PE + C C S +LW+C+ICG +GCGRY HA HW+ T H
Sbjct: 290 DNTCPVCRYVQS-PEVVAEQRCNDCGMSNDLWICLICGNIGCGRYAEQHAQRHWELTSHT 348
Query: 187 YSLELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDSGTSDALL 246
YSL++ +RVWDYAGDNYVHRLI++ DGKLVE + +++ S D + D
Sbjct: 349 YSLKVGGERVWDYAGDNYVHRLIENGADGKLVE------YQRESNASFDDKNQKGGD--- 399
Query: 247 SSKVEAIVNEYNELLAAQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKL 306
K+E I EY LL +QLE+Q+ Y+E L + + E+ +S+ K A AQ ++ ++ +L
Sbjct: 400 --KLEGIKLEYTLLLTSQLEDQRKYFEGL----RHDMEQTMSKMEKTAYAQ-VENLEHQL 452
Query: 307 -DRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDK 351
+R K DL++ + + K E+ K+A KD++
Sbjct: 453 TERSTELKSLKGDLDDTVTARKVAEKRATQTNEKVNKLANELKDER 498
Score = 135 (52.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 34/150 (22%), Positives = 76/150 (50%)
Query: 246 LSSKVEAIVNEYNELLAAQLEN---QKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKM 302
L +E +++ + AQ+EN Q T L+ K + + ++ +K ++ +
Sbjct: 426 LRHDMEQTMSKMEKTAYAQVENLEHQLTERSTELKSLKGDLDDTVT--ARKVAEKRATQT 483
Query: 303 QAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLRDL 362
K+++ E K ++N+ L K+Q++WK ++ ++ E +K A + KI+D ++Q+ DL
Sbjct: 484 NEKVNKLANELKDEREINQMLRKDQQVWKGQVEKLIESQKTARTEYEKKIEDLQSQVNDL 543
Query: 363 MAYLEAEKTLQQLSISNEIKDGTVLPMSVE 392
+ + E + L++ + +I + VE
Sbjct: 544 LMHFETQNKLKEQLDAGKITQEEITESQVE 573
>ASPGD|ASPL0000042460 [details] [associations]
symbol:AN10251 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0008139 "nuclear localization sequence binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045471 "response
to ethanol" evidence=IEA] InterPro:IPR001841 InterPro:IPR001607
Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271
SMART:SM00184 SMART:SM00290 GO:GO:0046872 EMBL:BN001307
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
HOGENOM:HOG000190616 EnsemblFungi:CADANIAT00008666 OMA:AHAFAHY
Uniprot:C8VLC6
Length = 503
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 123/312 (39%), Positives = 175/312 (56%)
Query: 80 SLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDSSCPVCRYC 139
S + + P S E P+CPVCLER+D+ T+G+LT IC H FHC+C+ KW S CPVCRY
Sbjct: 156 STKPLAPPTPSLIELPTCPVCLERMDE-TTGLLTIICQHVFHCTCLQKWKGSGCPVCRYT 214
Query: 140 QQQPEKSI-----------CFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYS 188
Q K+ C VC + NLW+C+ICG VGCGRY G HA H+ +T H ++
Sbjct: 215 QDDFRKTSQGFPFDDGNVECSVCHSDVNLWVCLICGNVGCGRYDGAHAFAHYSQTSHAFA 274
Query: 189 LELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDSGTSDALLSS 248
++L TQRVWDY GD YVHR+IQSKTDGKLVEL + DN + D D +DA+
Sbjct: 275 MDLSTQRVWDYIGDAYVHRIIQSKTDGKLVELPA-----ADN-SALDPPD--WTDAVPRE 326
Query: 249 KVEAIVNEYNELLAAQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDR 308
K+E + EY LL +QLE+Q+ Y+E +L+ A ++ + S A A + A L
Sbjct: 327 KLENMSVEYTHLLTSQLESQRAYFEGILERAVDKASQA-STAATSA-QEAADTATATLHS 384
Query: 309 CVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLRDLMAYLE- 367
E + L L ++ + E KA+ + E+ + R + + ++ + LMA +E
Sbjct: 385 L--EAQHLK-LTSEVIPSLERDKARAEKRAEKFETMARKMEREWREEKTMNESLMARIEH 441
Query: 368 AEKTLQQLSISN 379
++ L SN
Sbjct: 442 LTSEVEALKASN 453
Score = 131 (51.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 40/158 (25%), Positives = 70/158 (44%)
Query: 1 MTYADFCQFCA-SFIQHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSL 59
M+ +D F + + + R++RT ++Y VL++F S A ++ + +NG+ FNS+
Sbjct: 38 MSASDLLGFVGEATMDDVSHFRMIRT-ARANRYMVLMKFRSGKKAREWQKEWNGKVFNSM 96
Query: 60 EEEVCHVLFTVDVQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHS 119
E E CHV+F V+ G + P P P+ V + TS +T+
Sbjct: 97 EPETCHVVFVKSVEIQGVDPDAQGSNP-PGQQASLPTTSVQRPGVSS-TSPQPSTLAAAP 154
Query: 120 FHCSCISKWTDS-----SCPVCRYCQQQPEKSICFVCQ 152
++ T S +CPVC + + +CQ
Sbjct: 155 LSTKPLAPPTPSLIELPTCPVCLERMDETTGLLTIICQ 192
>UNIPROTKB|I3L5N8 [details] [associations]
symbol:BRAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00500000044909 Ensembl:ENSSSCT00000027806 OMA:GVENDEK
Uniprot:I3L5N8
Length = 185
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 88/165 (53%), Positives = 119/165 (72%)
Query: 92 TEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDSSCPVCRYCQQ-QP-EKSICF 149
TE P C VCLER+D+ +GILTT+CNHSFH C+ +W D++CPVCRYCQ +P E++ CF
Sbjct: 4 TELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTCPVCRYCQTPEPVEENKCF 63
Query: 150 VCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGDNYVHRLI 209
C ENLW+C+ICG +GCGRY HA H++ET+H Y+++L RVWDYAGDNYVHRL+
Sbjct: 64 ECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLV 123
Query: 210 QSKTDGKLVELNSHCLHGKDNCGSCDCVDSGTSDA--LLSSKVEA 252
SKTDGK+V+ C G D C + +D+ + LL+S++E+
Sbjct: 124 ASKTDGKIVQYE--C-EG-DTCQE-EKIDALQLEYSYLLTSQLES 163
>SGD|S000001002 [details] [associations]
symbol:ETP1 "Putative protein of unknown function required
for growth on ethanol" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0045471 "response to ethanol"
evidence=IMP] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008139 "nuclear
localization sequence binding" evidence=IDA] [GO:0043130 "ubiquitin
binding" evidence=IDA] InterPro:IPR001841 InterPro:IPR001607
Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271
SMART:SM00184 SMART:SM00290 SGD:S000001002 Prosite:PS00518
GO:GO:0005737 GO:GO:0045471 GO:GO:0046872 EMBL:BK006934
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:U11582
GO:GO:0043130 eggNOG:NOG272422 KO:K10632 GO:GO:0008139
InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
GeneTree:ENSGT00500000044909 HOGENOM:HOG000190616 OrthoDB:EOG4H75M9
EMBL:AY558115 PIR:S46825 RefSeq:NP_011853.1
ProteinModelPortal:P38748 SMR:P38748 DIP:DIP-2987N IntAct:P38748
MINT:MINT-436947 STRING:P38748 EnsemblFungi:YHL010C GeneID:856376
KEGG:sce:YHL010C CYGD:YHL010c OMA:CDHSFQC NextBio:981864
Genevestigator:P38748 GermOnline:YHL010C Uniprot:P38748
Length = 585
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 109/302 (36%), Positives = 173/302 (57%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDSSCPVCRYC----------QQQ 142
E P+CPVCLER+D +T+G++T C H+FHC C++KW +S CPVCR+ +Q
Sbjct: 236 ELPTCPVCLERMDSETTGLVTIPCQHTFHCQCLNKWKNSRCPVCRHSSLRLSRESLLKQA 295
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
+ + C C +++NLW+C+ICG VGCGRY HAI H++ET HC+++++ TQRVWDYAGD
Sbjct: 296 GDSAHCATCGSTDNLWICLICGNVGCGRYNSKHAIKHYEETLHCFAMDIRTQRVWDYAGD 355
Query: 203 NYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDSGTSDALLSSKVEAIVNEYNELLA 262
NYVHRL+Q++ DGKLVE+ ++ G+ D + + + ++ N+ + LA
Sbjct: 356 NYVHRLVQNEVDGKLVEVGGSGDDDNNDIGNSDELQNVVYGNRSKNGEKSNSNKKDGELA 415
Query: 263 AQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQ-KMQAKLDRCVRE--KKFLDDL 319
A + Y+ +Q + E + ++ KLQ K Q D E KK ++DL
Sbjct: 416 ANFLRHREYHLEYVQVLISQLE-----SQREYYELKLQEKDQTASDSSNVESLKKSMEDL 470
Query: 320 NENLLKNQEMWK----AKISEIEEREKM--ALRAKDDKIQDSEAQL-RDLMAYLEAEKTL 372
Q+ W+ A+ S++EE + L+A D + + QL R+ A E+++ L
Sbjct: 471 KLQFQVTQKEWQKREMAQKSKLEEDMLVIEGLQANLDHLSKKQEQLERENKALEESKQDL 530
Query: 373 QQ 374
++
Sbjct: 531 EE 532
Score = 248 (92.4 bits), Expect = 6.2e-30, Sum P(2) = 6.2e-30
Identities = 52/167 (31%), Positives = 86/167 (51%)
Query: 15 QHILEMRIVRTD--GMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLEEEVCHVLFTVDV 72
+ + RI+R GM ++VLI+F + A F + FNG+ F+ ++ E CHV+ ++
Sbjct: 141 KQVSNFRILRNQQKGMGFNFTVLIKFRNALDAKNFKEEFNGKSFSRMDPETCHVISVKEI 200
Query: 73 QFT-------GYTGSLEHVQPAPAS--------STEQPSCPVCLERLDQDTSGILTTICN 117
F ++ P + E P+CPVCLER+D +T+G++T C
Sbjct: 201 VFQKKLFQRPAANEDFPYLLTDPFTVKKKKELVKVELPTCPVCLERMDSETTGLVTIPCQ 260
Query: 118 HSFHCSCISKWTDSSCPVCRYCQQQPEKSICFVCQTSENLWMCVICG 164
H+FHC C++KW +S CPVCR+ + + + Q ++ C CG
Sbjct: 261 HTFHCQCLNKWKNSRCPVCRHSSLRLSRE-SLLKQAGDSAH-CATCG 305
Score = 148 (57.2 bits), Expect = 6.2e-30, Sum P(2) = 6.2e-30
Identities = 44/138 (31%), Positives = 80/138 (57%)
Query: 256 EYNELLAAQLENQKIYYETLLQEAKEETEKIIS--EAVKKAIAQ-KLQKMQAKLDRCVRE 312
EY ++L +QLE+Q+ YYE LQE K++T S E++KK++ KLQ + + RE
Sbjct: 427 EYVQVLISQLESQREYYELKLQE-KDQTASDSSNVESLKKSMEDLKLQFQVTQKEWQKRE 485
Query: 313 KKFLDDLNENLLKNQEMWKAKISEIEEREKMALR---AKDDKIQDSEAQLRDLMAYLEAE 369
L E++L + + +A + + ++++ R A ++ QD E Q++DLM YL+++
Sbjct: 486 MAQKSKLEEDMLVIEGL-QANLDHLSKKQEQLERENKALEESKQDLEEQVKDLMFYLDSQ 544
Query: 370 KTLQQLSISNEIKDGTVL 387
+ + S +K+GT+L
Sbjct: 545 EKFKDADES--VKEGTIL 560
>CGD|CAL0005604 [details] [associations]
symbol:orf19.1576 species:5476 "Candida albicans" [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0008139 "nuclear localization
sequence binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50271 SMART:SM00184 SMART:SM00290 CGD:CAL0005604
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AACQ01000008 EMBL:AACQ01000007 eggNOG:NOG272422 KO:K10632
InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029 RefSeq:XP_722477.1
RefSeq:XP_722618.1 ProteinModelPortal:Q5ALK2 STRING:Q5ALK2
GeneID:3635818 GeneID:3635931 KEGG:cal:CaO19.1576
KEGG:cal:CaO19.9149 Uniprot:Q5ALK2
Length = 622
Score = 323 (118.8 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 77/237 (32%), Positives = 133/237 (56%)
Query: 147 ICFVCQTSENLWMCVICGFVGCGRYKGG-HAIIHWKETEHCYSLELETQRVWDYAGDNYV 205
IC C +ENLW+C+ICG +GC RY H++ H+ +T HC+++E+ T RVWDYAGD YV
Sbjct: 328 ICMECDETENLWICLICGNIGCSRYAPEQHSLKHFVDTGHCFAMEIATSRVWDYAGDKYV 387
Query: 206 HRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDSGTSDALLSSKVEAIVNEYNELLAAQL 265
HRL+ +++DGKLVEL K N GS + D T D KV+ + EY++LL +QL
Sbjct: 388 HRLVTNESDGKLVELPDK--DDKSNGGSSNRNDP-TFD-----KVDEVGFEYSQLLISQL 439
Query: 266 ENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNENLLK 325
+Q+ YYE+LL++ + + + + + + ++ L +L +K
Sbjct: 440 ASQREYYESLLEQQQTAPKSRRGSSNNTKNNNHITNSSSGSNTNKINQEMLTELE---IK 496
Query: 326 NQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLRDLMAYLEAEKTLQQLSISNEIK 382
+++ +K+S++ L+ +KIQ + +L +M L +L + ++S +++
Sbjct: 497 VEDL-NSKLSDLTNSLIPQLK---EKIQSKDEKLNKVMRELNISNSLNE-ALSKKVE 548
Score = 190 (71.9 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDSSCPVCRY 138
E P+CPVCLER+D +G+LT C H+FHC C++KW D +CPVCRY
Sbjct: 216 ELPTCPVCLERMDATVTGLLTIPCQHTFHCQCLTKWKDDTCPVCRY 261
Score = 119 (46.9 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 15 QHILEMRIVRTDGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLEEEVCHVLFTVDVQF 74
++I +RI++++ +++ VLI+F A +F HFNG+ FNS+E E CHV++ VQ
Sbjct: 104 KNISHLRILKSN-KPNRFLVLIKFRDVMKAAEFQYHFNGKPFNSMEPETCHVVYVKTVQV 162
Query: 75 TGYTGSLEHVQPAPASSTEQPSCPVCLERLDQ----DTSGILTTICNHSFHCSCISKWTD 130
V + P + +SG+ T N+++H +
Sbjct: 163 MNSHKDNSVVDSMIPFLLQDPFTSAAASSGESGSSSSSSGVSTNNHNNNYHLIELP---- 218
Query: 131 SSCPVC 136
+CPVC
Sbjct: 219 -TCPVC 223
Score = 107 (42.7 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 38/160 (23%), Positives = 79/160 (49%)
Query: 228 KDNCGSCDCVDSGTSDALLSSKVEAIVNEYNELLAAQLENQKIYYETLLQEAKEETEKII 287
K GS + ++ ++ + +S + N+ N+ + +LE I E L + + T +I
Sbjct: 458 KSRRGSSN--NTKNNNHITNSSSGSNTNKINQEMLTELE---IKVEDLNSKLSDLTNSLI 512
Query: 288 SEAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRA 347
+ + +K+Q KL++ +RE + LNE L K E ++++ E K +
Sbjct: 513 PQ-----LKEKIQSKDEKLNKVMRELNISNSLNEALSKKVE----HLTKVGEDYKTTIEK 563
Query: 348 KDDKIQDSEAQLRDLMAYLEAEKTLQQLSISNEIKDGTVL 387
+ + Q+ DLM +L++++ + + S E+KDGT++
Sbjct: 564 LTGENKALNEQVTDLMFFLDSQEKFK--NESQEVKDGTIV 601
>UNIPROTKB|F8VRW0 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
assembly checkpoint" evidence=IEA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC018475 HGNC:HGNC:20064 IPI:IPI01022557
ProteinModelPortal:F8VRW0 SMR:F8VRW0 Ensembl:ENST00000551837
ArrayExpress:F8VRW0 Bgee:F8VRW0 Uniprot:F8VRW0
Length = 164
Score = 150 (57.9 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++E+ H +LE+ V+ Y D
Sbjct: 24 PQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCD 83
Query: 203 NYVHRLIQSKTDGKL 217
+YV + T G L
Sbjct: 84 DYV---LNDNTTGDL 95
>UNIPROTKB|F8VVD6 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
assembly checkpoint" evidence=IEA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC018475 HGNC:HGNC:20064 IPI:IPI01021117
ProteinModelPortal:F8VVD6 SMR:F8VVD6 Ensembl:ENST00000549639
ArrayExpress:F8VVD6 Bgee:F8VVD6 Uniprot:F8VVD6
Length = 111
Score = 150 (57.9 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++E+ H +LE+ V+ Y D
Sbjct: 24 PQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCD 83
Query: 203 NYVHRLIQSKTDGKL 217
+YV + T G L
Sbjct: 84 DYV---LNDNTTGDL 95
>UNIPROTKB|E1BLZ0 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0090266 "regulation of mitotic cell
cycle spindle assembly checkpoint" evidence=IEA] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=IEA] [GO:0051322 "anaphase" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0090231 GO:GO:0051322 GO:GO:0060564
GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834 OMA:AIKSQNY
EMBL:DAAA02012807 IPI:IPI00703062 RefSeq:NP_001192766.1
UniGene:Bt.36835 PRIDE:E1BLZ0 Ensembl:ENSBTAT00000026571
GeneID:517022 KEGG:bta:517022 NextBio:20872356 Uniprot:E1BLZ0
Length = 709
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 58/207 (28%), Positives = 98/207 (47%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++E+ H +LE+ V+ Y D
Sbjct: 24 PQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALGHFQESSHPVALEVNEMYVFCYLCD 83
Query: 203 NYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDSGTSDALLSSKVEAIVNEYNELLA 262
+YV + G L L S K+ C ++ +S +++ + L
Sbjct: 84 DYV---LNDNATGDLKLLRSTLSAIKNQNYHCTTRSGRVLRSMGTSDDSYFLHDGTQSLL 140
Query: 263 AQLENQKIYYETLLQEAKEETEKIISEAVKKA-IAQKLQKM-QAKLDRCVREKKFLDDLN 320
Q E+Q Y L + KI +++ I +K Q+ Q KL + RE+K
Sbjct: 141 -QHEDQM--YTALWHRRRILMGKIFRTWFEQSPIGRKRQEQFQEKLAK--REEK---KRR 192
Query: 321 ENLLKNQEMWKAKISEIEEREKMALRA 347
+ LL++Q KA++ + R+ + L+A
Sbjct: 193 QELLEHQA--KAELESMPPRKSLRLQA 217
>RGD|1308216 [details] [associations]
symbol:Usp44 "ubiquitin specific peptidase 44" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051322 "anaphase"
evidence=IEA] [GO:0060564 "negative regulation of mitotic
anaphase-promoting complex activity" evidence=IEA] [GO:0090266
"regulation of mitotic cell cycle spindle assembly checkpoint"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 RGD:1308216
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0090231 EMBL:CH473960 GO:GO:0051322
GO:GO:0060564 GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834
OrthoDB:EOG4XGZZK IPI:IPI00870073 RefSeq:NP_001101553.1
UniGene:Rn.64954 Ensembl:ENSRNOT00000007465 GeneID:314746
KEGG:rno:314746 UCSC:RGD:1308216 NextBio:668165 Uniprot:D4A251
Length = 481
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 40/118 (33%), Positives = 61/118 (51%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C VC T+E++W C+ C V CG+Y HA+ H++E+ H + E+ V+ Y +
Sbjct: 21 PQKWFCMVCNTTESIWACLSCSHVACGQYIQEHALKHFEESSHPVAFEVNDMYVFCYLCN 80
Query: 203 NYVHRLIQSKTDGKLVELNS--HCLHGKDNCGSCDCVDSGTSDALLSSKVEAIVNEYN 258
+YV + T G L L S + GK S CV SD++L V A + Y+
Sbjct: 81 DYV---LNDNTAGDLKSLRSTLSAIKGK----SYPCVVQ--SDSVLQP-VNAQADSYS 128
>ZFIN|ZDB-GENE-040426-774 [details] [associations]
symbol:usp44 "ubiquitin specific peptidase 44"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0051322 "anaphase" evidence=ISS] [GO:0090231 "regulation of
spindle checkpoint" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=ISS] [GO:0060564 "negative regulation of
mitotic anaphase-promoting complex activity" evidence=ISS]
[GO:0021551 "central nervous system morphogenesis" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 ZFIN:ZDB-GENE-040426-774 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0021551 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 CTD:84101 HOGENOM:HOG000015084 KO:K11834
EMBL:BC048060 IPI:IPI00512839 RefSeq:NP_956551.1 UniGene:Dr.78996
ProteinModelPortal:Q7ZUM8 MEROPS:C19.073 PRIDE:Q7ZUM8 GeneID:393227
KEGG:dre:393227 HOVERGEN:HBG018027 InParanoid:Q7ZUM8
NextBio:20814291 ArrayExpress:Q7ZUM8 Uniprot:Q7ZUM8
Length = 695
Score = 159 (61.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 49/178 (27%), Positives = 80/178 (44%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H+KE H +LE+ V+ Y D
Sbjct: 21 PQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALQHFKEQHHPLALEVNELYVYCYLCD 80
Query: 203 NYVHRLIQSKT-DGKLVE-----LNSHCLHGKDNCGSCDCVDSGTSDALLSSKVEAIVNE 256
+YV L + T D KL+ + S C G S D L S E + +
Sbjct: 81 DYV--LNDNATGDLKLLRSTLSAIKSQCYEVTTRSGRTLRSSSANGDQLSPSTQELQLRD 138
Query: 257 YNELLAAQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVREKK 314
+ + A ++ L + +TE+ K+ ++ Q+ + + R RE++
Sbjct: 139 EDRMFTALWHRRRALIGRLFRLWFAQTER----GKKRLEEERQQEEEEERKREARERR 192
>UNIPROTKB|F8VRI7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 EMBL:AC018475 HGNC:HGNC:20064
IPI:IPI01022768 ProteinModelPortal:F8VRI7 SMR:F8VRI7
Ensembl:ENST00000552440 ArrayExpress:F8VRI7 Bgee:F8VRI7
Uniprot:F8VRI7
Length = 496
Score = 155 (59.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 56/237 (23%), Positives = 111/237 (46%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++E+ H +LE+ V+ Y D
Sbjct: 24 PQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCD 83
Query: 203 NYVHRLIQSKTDG--KLVE-----LNSHCLHGKDNCGS-CDCVDSGTSDALLSSKVEAIV 254
+YV + T G KL+ + S H G + +G L ++++
Sbjct: 84 DYV---LNDNTTGDLKLLRRTLSAIKSQNYHCTTRSGRFLRSMGTGDDSYFLHDGAQSLL 140
Query: 255 NEYNELLAAQLENQKIY----YETLLQEA---KEETEKIISEAVKKAIAQKLQKMQAKLD 307
++L A ++I + T +++ +++ E+ E + + ++++K + +L+
Sbjct: 141 QSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPFQEKI--VVKREVKKRRQELE 198
Query: 308 RCVREKKFLDDLN-ENLLKNQEMWKAKISEIEE----REKMALRAKDDKIQDSEAQL 359
V+ + L+ + L+ Q + ++ I EI + A AKD + SE ++
Sbjct: 199 YQVKAE--LESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASPAKDKVLSTSENEI 253
>UNIPROTKB|Q6NTR6 [details] [associations]
symbol:usp44-a "Ubiquitin carboxyl-terminal hydrolase 44-A"
species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0060564 "negative regulation of
mitotic anaphase-promoting complex activity" evidence=ISS]
[GO:0090231 "regulation of spindle checkpoint" evidence=ISS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 KO:K11834 HOVERGEN:HBG018027 EMBL:BC068889
RefSeq:NP_001084641.1 UniGene:Xl.6668 ProteinModelPortal:Q6NTR6
GeneID:414600 KEGG:xla:414600 CTD:414600 Xenbase:XB-GENE-1014118
Uniprot:Q6NTR6
Length = 690
Score = 156 (60.0 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 56/211 (26%), Positives = 96/211 (45%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H+++++H +LE+ V+ Y D
Sbjct: 21 PQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALRHFQDSKHPLALEVNELYVFCYLCD 80
Query: 203 NYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDSGTSDALLSSKVEAIVNEYNELLA 262
+YV + T G L L S K C T +++++ I +E +
Sbjct: 81 DYV---LNDNTTGDLKLLRSTLSAIKSQNYDCTTRSGRTLRSMVTADDSFISHEGAQ--- 134
Query: 263 AQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNEN 322
A L+N+ + L K+ A+ K K + + +R +RE+ + E
Sbjct: 135 AFLQNEDRAFTALWHRRHALLGKVFRSWF--ALTPK-GKQRLEEER-LREEA--EQKREE 188
Query: 323 LLKNQEMWKAKISEIEEREKMALRAKDDKIQ 353
K ++ K K+ E E E + R K ++Q
Sbjct: 189 ARKKRQQLKRKLKE--EMESTSPR-KSSRLQ 216
>UNIPROTKB|Q5XGZ2 [details] [associations]
symbol:usp44-b "Ubiquitin carboxyl-terminal hydrolase 44-B"
species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0060564 "negative regulation of
mitotic anaphase-promoting complex activity" evidence=ISS]
[GO:0090231 "regulation of spindle checkpoint" evidence=ISS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 KO:K11834 HOVERGEN:HBG018027 EMBL:BC084285
RefSeq:NP_001088277.1 UniGene:Xl.49566 ProteinModelPortal:Q5XGZ2
GeneID:495110 KEGG:xla:495110 CTD:495110 Xenbase:XB-GENE-6254317
Uniprot:Q5XGZ2
Length = 690
Score = 155 (59.6 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 57/211 (27%), Positives = 95/211 (45%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H+++++H +LE+ V+ Y D
Sbjct: 21 PQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALRHFQDSKHPLALEVNELYVFCYLCD 80
Query: 203 NYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDSGTSDALLSSKVEAIVNEYNELLA 262
+YV + T G L L S K C T +++S+ I +E +
Sbjct: 81 DYV---LNDNTTGDLKLLRSTLSAIKSQNYDCTTRSGRTLRSMVSADDSFISHEGAQ--- 134
Query: 263 AQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNEN 322
A L+N+ + L K+ A+ K K + + +R +RE+ + E
Sbjct: 135 AFLQNEDRAFTALWHRRHALLGKVFRSWF--ALTPK-GKQRLEEER-LREEA--EHKREE 188
Query: 323 LLKNQEMWKAKISEIEEREKMALRAKDDKIQ 353
K ++ K K+ E E E R K ++Q
Sbjct: 189 ARKRRQQLKHKLKE--EMESTPPR-KSSRLQ 216
>UNIPROTKB|Q9H0E7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0051322 "anaphase" evidence=IMP]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP]
[GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=IMP] [GO:0090231 "regulation of spindle
checkpoint" evidence=IMP] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0090266 "regulation of mitotic cell cycle spindle assembly
checkpoint" evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0043161 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0090266 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
eggNOG:COG5077 GO:GO:0051322 GO:GO:0060564 CTD:84101
HOGENOM:HOG000015084 KO:K11834 OMA:AIKSQNY HOVERGEN:HBG018027
EMBL:AL136825 EMBL:AK315697 EMBL:AC018475 EMBL:BC030704
IPI:IPI00030306 RefSeq:NP_001035862.1 RefSeq:NP_115523.2
UniGene:Hs.646421 ProteinModelPortal:Q9H0E7 SMR:Q9H0E7
IntAct:Q9H0E7 STRING:Q9H0E7 MEROPS:C19.057 PhosphoSite:Q9H0E7
DMDM:300669621 PaxDb:Q9H0E7 PRIDE:Q9H0E7 DNASU:84101
Ensembl:ENST00000258499 Ensembl:ENST00000393091
Ensembl:ENST00000537435 GeneID:84101 KEGG:hsa:84101 UCSC:uc001teg.3
GeneCards:GC12M095910 H-InvDB:HIX0010895 HGNC:HGNC:20064
HPA:HPA026543 MIM:610993 neXtProt:NX_Q9H0E7 PharmGKB:PA134931457
InParanoid:Q9H0E7 OrthoDB:EOG4XGZZK PhylomeDB:Q9H0E7
GenomeRNAi:84101 NextBio:73349 ArrayExpress:Q9H0E7 Bgee:Q9H0E7
CleanEx:HS_USP44 Genevestigator:Q9H0E7 GermOnline:ENSG00000136014
Uniprot:Q9H0E7
Length = 712
Score = 155 (59.6 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 56/237 (23%), Positives = 111/237 (46%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++E+ H +LE+ V+ Y D
Sbjct: 24 PQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCD 83
Query: 203 NYVHRLIQSKTDG--KLVE-----LNSHCLHGKDNCGS-CDCVDSGTSDALLSSKVEAIV 254
+YV + T G KL+ + S H G + +G L ++++
Sbjct: 84 DYV---LNDNTTGDLKLLRRTLSAIKSQNYHCTTRSGRFLRSMGTGDDSYFLHDGAQSLL 140
Query: 255 NEYNELLAAQLENQKIY----YETLLQEA---KEETEKIISEAVKKAIAQKLQKMQAKLD 307
++L A ++I + T +++ +++ E+ E + + ++++K + +L+
Sbjct: 141 QSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPFQEKI--VVKREVKKRRQELE 198
Query: 308 RCVREKKFLDDLN-ENLLKNQEMWKAKISEIEE----REKMALRAKDDKIQDSEAQL 359
V+ + L+ + L+ Q + ++ I EI + A AKD + SE ++
Sbjct: 199 YQVKAE--LESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASPAKDKVLSTSENEI 253
>UNIPROTKB|E2R0T7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 EMBL:AAEX03009951
Ensembl:ENSCAFT00000010306 Uniprot:E2R0T7
Length = 668
Score = 154 (59.3 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 61/230 (26%), Positives = 113/230 (49%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++E+ H +LE+ V+ Y D
Sbjct: 24 PQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCD 83
Query: 203 NYVHRLIQSKT-DGKLVELNSHCLHGKD-NCG--SCDCVDS-GTSDAL--LSSKVEAIVN 255
+YV L + T D KL+ + ++ C S + S GTSD L + ++
Sbjct: 84 DYV--LNDNATGDLKLLRNMLSAIKSQNYQCTTRSGRVLRSVGTSDDTYYLPDGTQFLLQ 141
Query: 256 EYNELLAAQLENQKIYYETLLQEAKEETE---KIISEAVKKAIAQK-LQKMQAKLDRCVR 311
+++ A ++I + + E++ K E ++ IA++ ++K Q +L+ V+
Sbjct: 142 NEDQMYTALWHRRRILMGKIFRIWFEQSSIGRKRQEEQFQEKIAKREVKKRQQELEYQVK 201
Query: 312 EKKFLDDLN-ENLLKNQEMWKAKISEIEE----REKMALRAKDDKIQDSE 356
+ L++++ L+ Q + ++ EI ++ A AKD + SE
Sbjct: 202 AE--LENIHPRKSLRLQSLAQSTTVEIVPVQVPQQTPASPAKDKVVSTSE 249
>UNIPROTKB|E2R0W7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0090266 "regulation of
mitotic cell cycle spindle assembly checkpoint" evidence=IEA]
[GO:0060564 "negative regulation of mitotic anaphase-promoting
complex activity" evidence=IEA] [GO:0051322 "anaphase"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834
OMA:AIKSQNY EMBL:AAEX03009951 RefSeq:XP_532654.1
ProteinModelPortal:E2R0W7 Ensembl:ENSCAFT00000010298 GeneID:475430
KEGG:cfa:475430 NextBio:20851273 Uniprot:E2R0W7
Length = 711
Score = 154 (59.3 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 61/230 (26%), Positives = 113/230 (49%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++E+ H +LE+ V+ Y D
Sbjct: 24 PQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCD 83
Query: 203 NYVHRLIQSKT-DGKLVELNSHCLHGKD-NCG--SCDCVDS-GTSDAL--LSSKVEAIVN 255
+YV L + T D KL+ + ++ C S + S GTSD L + ++
Sbjct: 84 DYV--LNDNATGDLKLLRNMLSAIKSQNYQCTTRSGRVLRSVGTSDDTYYLPDGTQFLLQ 141
Query: 256 EYNELLAAQLENQKIYYETLLQEAKEETE---KIISEAVKKAIAQK-LQKMQAKLDRCVR 311
+++ A ++I + + E++ K E ++ IA++ ++K Q +L+ V+
Sbjct: 142 NEDQMYTALWHRRRILMGKIFRIWFEQSSIGRKRQEEQFQEKIAKREVKKRQQELEYQVK 201
Query: 312 EKKFLDDLN-ENLLKNQEMWKAKISEIEE----REKMALRAKDDKIQDSE 356
+ L++++ L+ Q + ++ EI ++ A AKD + SE
Sbjct: 202 AE--LENIHPRKSLRLQSLAQSTTVEIVPVQVPQQTPASPAKDKVVSTSE 249
>UNIPROTKB|G8JYB7 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform d" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 PANTHER:PTHR10625 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 GO:GO:0033558
RefSeq:NP_001255270.1 ProteinModelPortal:G8JYB7 SMR:G8JYB7
EnsemblMetazoa:F41H10.6d WormBase:F41H10.6d Uniprot:G8JYB7
Length = 138
Score = 129 (50.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 28/90 (31%), Positives = 43/90 (47%)
Query: 131 SSCPVCRYCQQQPEKSI-----CFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEH 185
++CP + + P I C CQ +W C+ C CGR+ HA++H + H
Sbjct: 36 ATCPHLKEVKPLPPAKINARTACSECQIGAEVWTCLTCYKYNCGRFVNEHAMMHHLSSSH 95
Query: 186 CYSLELETQRVWDYAGDNYVHR--LIQSKT 213
+L + VW Y D+YVH LI +K+
Sbjct: 96 PMALSMADLSVWCYPCDSYVHNPALIGAKS 125
>UNIPROTKB|Q0V9G5 [details] [associations]
symbol:usp44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0051322 "anaphase" evidence=ISS] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=ISS] [GO:0090231 "regulation of spindle
checkpoint" evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 GO:GO:0090231
eggNOG:COG5533 GO:GO:0051322 GO:GO:0060564 CTD:84101
HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 EMBL:BC121579
RefSeq:NP_001072389.1 UniGene:Str.5094 ProteinModelPortal:Q0V9G5
GeneID:779843 KEGG:xtr:779843 Xenbase:XB-GENE-1014112
Uniprot:Q0V9G5
Length = 652
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 52/195 (26%), Positives = 88/195 (45%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H+++++H +LE+ V+ Y D
Sbjct: 21 PQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALRHFQDSKHPLALEVNELYVFCYLCD 80
Query: 203 NYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDSGTSDALLSSKVEAIVNEYNELLA 262
+YV + T G L L S K C T +++++ I +E +
Sbjct: 81 DYV---LNDNTTGDLKLLRSTLSAIKSQNYDCTTRSGRTLRSMVTADDSFISHEGAQ--- 134
Query: 263 AQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQK-LQKMQAKLDRCVREKKFLDDLNE 321
A L+N+ + L K+ A+ K Q+++ + R V E+K E
Sbjct: 135 AFLQNEDRAFTALWHRRHALLGKVFRSWF--ALTPKGKQRLEEERLREVAEQK-----RE 187
Query: 322 NLLKNQEMWKAKISE 336
K ++ K K+ E
Sbjct: 188 EARKRRQQLKRKLKE 202
>UNIPROTKB|I3LA47 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0090266 "regulation of mitotic cell
cycle spindle assembly checkpoint" evidence=IEA] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=IEA] [GO:0051322 "anaphase" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0090231 GO:GO:0051322 GO:GO:0060564
GeneTree:ENSGT00690000101718 KO:K11834 OMA:AIKSQNY EMBL:FP340372
RefSeq:XP_003126758.2 Ensembl:ENSSSCT00000025589 GeneID:100516911
KEGG:ssc:100516911 Uniprot:I3LA47
Length = 709
Score = 152 (58.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 45/181 (24%), Positives = 88/181 (48%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++E+ H +LE+ V+ Y D
Sbjct: 24 PQKWHCVDCNTTESIWACLSCPHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYFCD 83
Query: 203 NYVHRLIQSKT-DGKLVE-----LNSHCLHGKDNCGSCDCVDSGTSDA--LLSSKVEAIV 254
+YV L + T D KL+ + S H G GTSD L ++++
Sbjct: 84 DYV--LNDNATGDLKLLRSTLSAIKSQSYHCTTRSGRV-LRSVGTSDDSDFLHDGAQSLL 140
Query: 255 NEYNELLAAQLENQKIY----YETLLQEA----KEETEKIISEAVKKAIAQKLQKMQAKL 306
+++ A ++I + T +++ K + ++ + K+ + ++ Q+++ ++
Sbjct: 141 QNEDQMYTALWHRRRILMGKIFRTWFEQSPIGRKRQEDQFQEKIAKREVKKRRQELEYQV 200
Query: 307 D 307
+
Sbjct: 201 E 201
>UNIPROTKB|D2HBJ8 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9646 "Ailuropoda melanoleuca" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0051322 "anaphase"
evidence=ISS] [GO:0060564 "negative regulation of mitotic
anaphase-promoting complex activity" evidence=ISS] [GO:0090231
"regulation of spindle checkpoint" evidence=ISS] [GO:0090266
"regulation of mitotic cell cycle spindle assembly checkpoint"
evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0043161 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0090266 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
GO:GO:0051322 GO:GO:0060564 GeneTree:ENSGT00690000101718
EMBL:GL192660 RefSeq:XP_002919284.1 Ensembl:ENSAMET00000002387
GeneID:100470180 KEGG:aml:100470180 CTD:84101 HOGENOM:HOG000015084
KO:K11834 OMA:AIKSQNY Uniprot:D2HBJ8
Length = 711
Score = 152 (58.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 44/177 (24%), Positives = 81/177 (45%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++E+ H +LE+ V+ Y D
Sbjct: 24 PQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCD 83
Query: 203 NYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDS------GTSDAL--LSSKVEAIV 254
+YV + G L L S K C GTSD L ++++
Sbjct: 84 DYV---LNDNATGDLKLLRSMLSAIKSQNYQCTTRSGRVLRSMGTSDDTYYLHDGTQSLL 140
Query: 255 NEYNELLAAQLENQKIY----YETLLQEA----KEETEKIISEAVKKAIAQKLQKMQ 303
+++ A ++I + T +++ K + E+ + K+ + ++ Q+++
Sbjct: 141 QNEDQMYTALWHRRRILMSKIFRTWFEQSPTGRKRQEEQFQEKIAKREVKKRRQELE 197
>UNIPROTKB|F1P4C5 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051322 "anaphase" evidence=IEA] [GO:0060564 "negative
regulation of mitotic anaphase-promoting complex activity"
evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
assembly checkpoint" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 GeneTree:ENSGT00690000101718 EMBL:AADN02005945
IPI:IPI00600923 Ensembl:ENSGALT00000018595 Uniprot:F1P4C5
Length = 717
Score = 152 (58.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 60/255 (23%), Positives = 120/255 (47%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++E H +LE+ V+ Y D
Sbjct: 24 PQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALKHFQENGHPVALEVNELYVFCYLCD 83
Query: 203 NYVHRLIQSKT-DGKLVELNSHCLHG-KDNCG--SCDCVDS-GTSD-ALLSSK-VEAIVN 255
+YV L + T D KL+ + K C S + S G SD + LS +A++
Sbjct: 84 DYV--LNDNATGDIKLLRSTLSAIKSQKYECTTRSGRTLRSMGASDDSYLSHDGAQALLR 141
Query: 256 EYNELLAAQLENQKIYYETLLQEAKEETE--KIISEAVKKAIAQKLQKMQAKLDRCVREK 313
+ + A ++ + + + + T K I E K+ ++ ++ +A+ R R++
Sbjct: 142 NQDRMFTALWHRRRAFMGKIFRSWFQLTPSGKKILEEEKRLEEEEERRNKARKRRQERKR 201
Query: 314 KFLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLRDLMAYLEAEKTLQ 373
+ +++ + + ++ + + + ++ K + +S ++L++ Y E L+
Sbjct: 202 QLKEEMEK--MPPRKSCRLQNQMRMSSQTASVTQKTSQSTESVSELKE--TYTSDEVRLK 257
Query: 374 QLSISNEIKDGTVLP 388
++ S + TV P
Sbjct: 258 KIGDSPIKRRPTVTP 272
>ZFIN|ZDB-GENE-030131-4153 [details] [associations]
symbol:usp16 "ubiquitin specific protease 16"
species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA;ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISS] [GO:0016578 "histone deubiquitination"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0051289 "protein homotetramerization"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0007067 "mitosis" evidence=IEA;ISS] [GO:0045901
"positive regulation of translational elongation" evidence=ISS]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0043130 "ubiquitin
binding" evidence=ISS] [GO:0070537 "histone H2A K63-linked
deubiquitination" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
ZFIN:ZDB-GENE-030131-4153 GO:GO:0005634 GO:GO:0045893 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0006974 GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0042393 GO:GO:0043130
GO:GO:0004197 GO:GO:0004843 GO:GO:0004221 GO:GO:0070537
GO:GO:0045901 eggNOG:COG5560 CTD:10600 HOGENOM:HOG000154755
HOVERGEN:HBG062704 KO:K11844 OrthoDB:EOG495ZRD EMBL:CR854897
IPI:IPI00851694 RefSeq:NP_001139569.1 UniGene:Dr.99665
ProteinModelPortal:A8HAL1 SMR:A8HAL1 STRING:A8HAL1
Ensembl:ENSDART00000085645 GeneID:569700 KEGG:dre:569700
GeneTree:ENSGT00690000102047 OMA:CKNVAEE NextBio:20889807
ArrayExpress:A8HAL1 Bgee:A8HAL1 Uniprot:A8HAL1
Length = 815
Score = 139 (54.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 39/105 (37%), Positives = 55/105 (52%)
Query: 123 SCISK-WTDSSCPVCRYCQQQPEKSICFVCQT---SENLWMCVICGFVGCGRYKGGHAII 178
+C+++ W SSC C Q +PE+ QT S +WMC+ CG GCGR HAI
Sbjct: 39 ACLNEHW--SSCQDCE--QDKPEEKQILEDQTDGESPAVWMCLKCGHRGCGRSGNQHAIK 94
Query: 179 HWK--ETE-HCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVEL 220
H++ +E HC L L+ VW Y D+ V Q + G+L +L
Sbjct: 95 HYETPRSEPHCLVLSLDVWSVWCYICDDEV----QYSSTGQLAQL 135
Score = 55 (24.4 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 267 NQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNENLLKN 326
+Q Y LL++ EE S ++ A++ +L +Q +L+R + L +
Sbjct: 227 SQTQYLRELLKQIAEEKS---SFSITPALSSELDPLQIQLERPGSLTLAMCQLMNEI--- 280
Query: 327 QEMWKAKISEIE---EREKMALRAKDDKIQDSEAQLRDLMAYLEAEK 370
QE K ++ E + K A R K + QDS+ LR L+ + AE+
Sbjct: 281 QETKKGVVTPKELFTQVCKKAPRFKGFQQQDSQELLRYLLDGMRAEE 327
>UNIPROTKB|Q5T3E1 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase 49"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
EMBL:AL160163 EMBL:AL365205 HOGENOM:HOG000015084 HOVERGEN:HBG018027
UniGene:Hs.665742 HGNC:HGNC:20078 IPI:IPI00639902 SMR:Q5T3E1
STRING:Q5T3E1 Ensembl:ENST00000373010 Uniprot:Q5T3E1
Length = 585
Score = 145 (56.1 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++ET H ++E+ V+ Y
Sbjct: 21 PQKWCCLECATTESVWACLKCSHVACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCK 80
Query: 203 NYVHRLIQSKTDGKLVELNSHCL 225
+YV + +G L L S L
Sbjct: 81 DYV---LNDNPEGDLKLLRSSLL 100
>UNIPROTKB|Q70CQ1 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase 49"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0005737 EMBL:CH471081 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 eggNOG:COG5077 EMBL:AL365205
HOGENOM:HOG000015084 KO:K11834 MEROPS:C19.073 HOVERGEN:HBG018027
OrthoDB:EOG4XGZZK EMBL:AJ586139 EMBL:BC014176 IPI:IPI00156871
IPI:IPI00455818 RefSeq:NP_061031.2 UniGene:Hs.665742
ProteinModelPortal:Q70CQ1 SMR:Q70CQ1 IntAct:Q70CQ1 STRING:Q70CQ1
PhosphoSite:Q70CQ1 DMDM:52000871 PaxDb:Q70CQ1 PRIDE:Q70CQ1
DNASU:25862 Ensembl:ENST00000297229 Ensembl:ENST00000373006
Ensembl:ENST00000373009 Ensembl:ENST00000394253 GeneID:25862
KEGG:hsa:25862 UCSC:uc003ori.3 CTD:25862 GeneCards:GC06M041762
H-InvDB:HIX0164985 HGNC:HGNC:20078 HPA:HPA030254 HPA:HPA030255
neXtProt:NX_Q70CQ1 PharmGKB:PA134954570 InParanoid:Q70CQ1
OMA:VRGQKQD GenomeRNAi:25862 NextBio:47231 ArrayExpress:Q70CQ1
Bgee:Q70CQ1 CleanEx:HS_USP49 Genevestigator:Q70CQ1
GermOnline:ENSG00000164663 Uniprot:Q70CQ1
Length = 688
Score = 145 (56.1 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++ET H ++E+ V+ Y
Sbjct: 21 PQKWCCLECATTESVWACLKCSHVACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCK 80
Query: 203 NYVHRLIQSKTDGKLVELNSHCL 225
+YV + +G L L S L
Sbjct: 81 DYV---LNDNPEGDLKLLRSSLL 100
>UNIPROTKB|Q5JV78 [details] [associations]
symbol:USP45 "Ubiquitin carboxyl-terminal hydrolase 45"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL137784
EMBL:AL513550 UniGene:Hs.143410 HGNC:HGNC:20080 ChiTaRS:USP45
HOGENOM:HOG000138193 IPI:IPI00553181 SMR:Q5JV78 STRING:Q5JV78
Ensembl:ENST00000369231 HOVERGEN:HBG056331 Uniprot:Q5JV78
Length = 182
Score = 128 (50.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/144 (25%), Positives = 67/144 (46%)
Query: 86 PAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW-TDSSCPVCRYCQQQPE 144
P A +++P+ P + D G+ +H+ + + + ++ VC C ++
Sbjct: 11 PEKAKRSKRPTVPHDEDSSDDIAVGLTCQHVSHAISVNHVKRAIAENLWSVCSECLKERR 70
Query: 145 KSICFVCQTSENLWMCVICGFVGCGRY-KGGHAIIHWKE--TE-HCYSLELETQRVWDYA 200
+ TS+ +W+C+ CGF GCG+ + H++ H+K TE HC + L T +W Y
Sbjct: 71 FYDGQLVLTSD-IWLCLKCGFQGCGKNSESQHSLKHFKSSRTEPHCIIINLSTWIIWCYE 129
Query: 201 GDNYVHRLIQSKTDGKLVE-LNSH 223
D + K ++V+ L H
Sbjct: 130 CDEKLSTHCNKKVLAQIVDFLQKH 153
>UNIPROTKB|E1BGQ9 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862
OMA:VRGQKQD EMBL:DAAA02055061 IPI:IPI00716640 RefSeq:XP_002697284.1
RefSeq:XP_595518.4 ProteinModelPortal:E1BGQ9
Ensembl:ENSBTAT00000011820 GeneID:517349 KEGG:bta:517349
NextBio:20872416 Uniprot:E1BGQ9
Length = 683
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++ET H ++E+ V+ Y
Sbjct: 21 PQKWYCRECATTESVWACLKCSHVACGRYIEDHALKHFEETRHPLAMEVRDLYVFCYLCK 80
Query: 203 NYVHRLIQSKTDGKLVELNSHCL 225
+YV + +G L L S L
Sbjct: 81 DYV---LNDNPEGDLKLLRSSLL 100
>MGI|MGI:3045318 [details] [associations]
symbol:Usp44 "ubiquitin specific peptidase 44" species:10090
"Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0051322 "anaphase"
evidence=ISO] [GO:0060564 "negative regulation of mitotic
anaphase-promoting complex activity" evidence=ISO] [GO:0090231
"regulation of spindle checkpoint" evidence=ISO] [GO:0090266
"regulation of mitotic cell cycle spindle assembly checkpoint"
evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS50271
MGI:MGI:3045318 GO:GO:0005634 GO:GO:0043161 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0090266 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0051322 GO:GO:0060564 CTD:84101
HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK
EMBL:AK088109 EMBL:CJ236846 EMBL:AC124686 EMBL:BC111886
IPI:IPI00224757 RefSeq:NP_001193780.1 UniGene:Mm.276331
ProteinModelPortal:Q8C2S0 SMR:Q8C2S0 STRING:Q8C2S0
PhosphoSite:Q8C2S0 GeneID:327799 KEGG:mmu:327799 UCSC:uc011xlw.1
eggNOG:KOG1867 InParanoid:Q8C2S0 NextBio:397964 Bgee:Q8C2S0
Genevestigator:Q8C2S0 Uniprot:Q8C2S0
Length = 711
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C VC T+E++W C+ C V CG+Y HA+ H++E+ H + E+ + Y +
Sbjct: 21 PQKWYCMVCNTTESIWACLSCSHVACGKYIQEHALKHFQESSHPVAFEVNDMYAFCYLCN 80
Query: 203 NYVHRLIQSKTDGKLVELNS 222
+YV + G L L S
Sbjct: 81 DYV---LNDNAAGDLKSLRS 97
>MGI|MGI:2685391 [details] [associations]
symbol:Usp49 "ubiquitin specific peptidase 49" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 MGI:MGI:2685391 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 UniGene:Mm.59393
GeneTree:ENSGT00690000101718 HOGENOM:HOG000015084 KO:K11834
MEROPS:C19.073 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK CTD:25862
OMA:VRGQKQD EMBL:BC060712 IPI:IPI00420459 RefSeq:NP_940813.1
ProteinModelPortal:Q6P9L4 SMR:Q6P9L4 STRING:Q6P9L4
PhosphoSite:Q6P9L4 PRIDE:Q6P9L4 Ensembl:ENSMUST00000024779
GeneID:224836 KEGG:mmu:224836 UCSC:uc008cvv.1 InParanoid:Q6P9L4
NextBio:377415 Bgee:Q6P9L4 CleanEx:MM_USP49 Genevestigator:Q6P9L4
GermOnline:ENSMUSG00000023984 Uniprot:Q6P9L4
Length = 685
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E+ W C+ C V CGRY HA+ H++ET H ++E+ V+ Y
Sbjct: 21 PQKWCCLQCATTESAWACLKCSHVACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCK 80
Query: 203 NYVHRLIQSKTDGKLVELNSHCL 225
+YV + +G L L S L
Sbjct: 81 DYV---LNDNPEGDLKLLRSSLL 100
>RGD|1310513 [details] [associations]
symbol:Usp49 "ubiquitin specific peptidase 49" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
RGD:1310513 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11834
OrthoDB:EOG4XGZZK CTD:25862 OMA:VRGQKQD EMBL:AC129162
IPI:IPI00371730 RefSeq:NP_001129942.1 UniGene:Rn.147913
Ensembl:ENSRNOT00000018550 GeneID:316211 KEGG:rno:316211
UCSC:RGD:1310513 NextBio:670532 Uniprot:D3ZJ49
Length = 685
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E+ W C+ C V CGRY HA+ H++ET H ++E+ V+ Y
Sbjct: 21 PQKWCCLECATTESAWACLKCSHVACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCK 80
Query: 203 NYVHRLIQSKTDGKLVELNSHCL 225
+YV + +G L L S L
Sbjct: 81 DYV---LNDNPEGDLKLLRSSLL 100
>UNIPROTKB|I3LRM6 [details] [associations]
symbol:I3LRM6 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 OMA:VRGQKQD EMBL:CU468691
Ensembl:ENSSSCT00000023974 Uniprot:I3LRM6
Length = 628
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++ET H ++E+ V+ Y
Sbjct: 21 PQKWCCRECATTESVWACLKCSHVACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCK 80
Query: 203 NYVHRLIQSKTDGKLVELNSHCL 225
+YV + +G L L S L
Sbjct: 81 DYV---LNDNPEGDLKLLRSSLL 100
>UNIPROTKB|E2RP15 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862 OMA:VRGQKQD
EMBL:AAEX03008323 RefSeq:XP_532134.3 Ensembl:ENSCAFT00000002525
GeneID:474899 KEGG:cfa:474899 NextBio:20850836 Uniprot:E2RP15
Length = 681
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++ET H ++E+ V+ Y
Sbjct: 21 PQKWCCRECATTESVWACLKCSHVACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCK 80
Query: 203 NYVHRLIQSKTDGKLVELNSHCL 225
+YV + +G L L S L
Sbjct: 81 DYV---LNDNPEGDLKLLRSSLL 100
>UNIPROTKB|F1RUW2 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862 EMBL:CU914409
RefSeq:XP_003128438.3 Ensembl:ENSSSCT00000001812 GeneID:100520499
KEGG:ssc:100520499 OMA:INCKISE Uniprot:F1RUW2
Length = 682
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+K C C T+E++W C+ C V CGRY HA+ H++ET H ++E+ V+ Y
Sbjct: 21 PQKWCCRECATTESVWACLKCSHVACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCK 80
Query: 203 NYVHRLIQSKTDGKLVELNSHCL 225
+YV + +G L L S L
Sbjct: 81 DYV---LNDNPEGDLKLLRSSLL 100
>TAIR|locus:2074678 [details] [associations]
symbol:AT3G11110 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC009991 EMBL:AC073395 EMBL:BT031381 IPI:IPI00524656
RefSeq:NP_187722.1 UniGene:At.53265 ProteinModelPortal:Q9SRM0
SMR:Q9SRM0 EnsemblPlants:AT3G11110.1 GeneID:820282
KEGG:ath:AT3G11110 TAIR:At3g11110 eggNOG:NOG241452
HOGENOM:HOG000238431 InParanoid:Q9SRM0 OMA:EKECCIC PhylomeDB:Q9SRM0
ProtClustDB:CLSN2684057 Genevestigator:Q9SRM0 GermOnline:AT3G11110
Uniprot:Q9SRM0
Length = 158
Score = 116 (45.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 89 ASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW--TDSSCPVCR 137
A E+ C +CL ++ + C+H +HC C+ +W T+SSCP+CR
Sbjct: 99 AEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCR 149
>TAIR|locus:2153654 [details] [associations]
symbol:AT5G05910 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 InterPro:IPR024766
Pfam:PF12678 EMBL:AB017060 IPI:IPI00547246 RefSeq:NP_196210.1
UniGene:At.54737 ProteinModelPortal:Q9FI95 SMR:Q9FI95
EnsemblPlants:AT5G05910.1 GeneID:830476 KEGG:ath:AT5G05910
TAIR:At5g05910 eggNOG:NOG274459 HOGENOM:HOG000152485
InParanoid:Q9FI95 OMA:HEDFTLM PhylomeDB:Q9FI95
ProtClustDB:CLSN2916389 Genevestigator:Q9FI95 Uniprot:Q9FI95
Length = 151
Score = 116 (45.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 97 CPVCLE---RLDQDTSGILTTI--CNHSFHCSCISKWTDSS--CPVCR 137
CP+CLE ++D D ++ + CNHSFH +CI W S CP+CR
Sbjct: 92 CPICLEDLKKVDNDDDKVVVCLSKCNHSFHMNCIFSWLRESQDCPICR 139
>UNIPROTKB|I3LPK3 [details] [associations]
symbol:USP45 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS50271
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00690000102047 EMBL:CU041276
Ensembl:ENSSSCT00000030684 Uniprot:I3LPK3
Length = 282
Score = 134 (52.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 36/149 (24%), Positives = 67/149 (44%)
Query: 89 ASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW-TDSSCPVCRYCQQQPEKSI 147
A +++P+ P + D G +H+ + + + + T++ VC C ++ S
Sbjct: 14 AKRSKRPTIPHDEDSSDDIAVGFTCQHVSHAINVNHVKRAITENLWSVCSECLKERRFSD 73
Query: 148 CFVCQTSENLWMCVICGFVGCGRY-KGGHAIIH---WKETEHCYSLELETQRVWDYAGDN 203
S+ +W+C+ CGF GCG+ + H++ H W+ HC + L T +W Y D
Sbjct: 74 GQPVLLSD-IWLCLKCGFQGCGKNSESQHSVKHFNSWRAELHCIIISLSTWIIWCYECDE 132
Query: 204 YVHRLIQSKTDGKLVE-LNSHCLHGKDNC 231
+ K ++V+ L H + NC
Sbjct: 133 KLSTHCNKKVLAQIVDFLQKHVSKTQTNC 161
>UNIPROTKB|D6RC01 [details] [associations]
symbol:USP45 "Ubiquitin carboxyl-terminal hydrolase 45"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 EMBL:AL137784 EMBL:AL513550 IPI:IPI00967505
HGNC:HGNC:20080 ChiTaRS:USP45 HOGENOM:HOG000138193
ProteinModelPortal:D6RC01 SMR:D6RC01 Ensembl:ENST00000506871
ArrayExpress:D6RC01 Bgee:D6RC01 Uniprot:D6RC01
Length = 345
Score = 134 (52.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 78/325 (24%), Positives = 137/325 (42%)
Query: 86 PAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW-TDSSCPVCRYCQQQPE 144
P A +++P+ P + D G+ +H+ + + + ++ VC C ++
Sbjct: 11 PEKAKRSKRPTVPHDEDSSDDIAVGLTCQHVSHAISVNHVKRAIAENLWSVCSECLKERR 70
Query: 145 KSICFVCQTSENLWMCVICGFVGCGRY-KGGHAIIHWKE--TE-HCYSLELETQRVWDYA 200
+ TS+ +W+C+ CGF GCG+ + H++ H+K TE HC + L T +W Y
Sbjct: 71 FYDGQLVLTSD-IWLCLKCGFQGCGKNSESQHSLKHFKSSRTEPHCIIINLSTWIIWCYE 129
Query: 201 GDNYVHRLIQSKTDGKLVE-LNSHCLHGKDNCGS-----CD--C----VDSGTSDALLSS 248
D + K ++V+ L H + + S C+ C + G LS
Sbjct: 130 CDEKLSTHCNKKVLAQIVDFLQKHASKTQTSAFSRIMKLCEEKCETDEIQKGGKCRNLS- 188
Query: 249 KVEAIVNEYNE-LLAAQLEN-QKIYYET-LLQEAKEETEKIISEAVKKAIAQKLQKMQAK 305
V I N N A ++N + Y T L+ E KE + K+ + + +L + +
Sbjct: 189 -VRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKL---KIFPSSDSQLDPLVVE 244
Query: 306 LDRCVREKK----FLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLRD 361
L R FL + E K K +++ ++ A R KD + QDS+ L
Sbjct: 245 LSRPGPLTSALFLFLHSMKETE-KGPLSPKVLFNQLCQK---APRFKDFQQQDSQELLHY 300
Query: 362 LMAYLEAEKTLQ-QLSISNEIKDGT 385
L+ + E+T + Q SI + T
Sbjct: 301 LLDAVRTEETKRIQASILKAFNNPT 325
>UNIPROTKB|C9J1C6 [details] [associations]
symbol:RNF181 "E3 ubiquitin-protein ligase RNF181"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC016753 HOGENOM:HOG000031081
OrthoDB:EOG40VVQW HGNC:HGNC:28037 IPI:IPI00926363
ProteinModelPortal:C9J1C6 SMR:C9J1C6 STRING:C9J1C6
Ensembl:ENST00000441634 ArrayExpress:C9J1C6 Bgee:C9J1C6
Uniprot:C9J1C6
Length = 139
Score = 112 (44.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 91 STEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTD--SSCPVCRY 138
S + CPVCL +++ + I C+H FH SCI W +SCP+CRY
Sbjct: 70 SQAELKCPVCLLEFEEEETAIEMP-CHHLFHSSCILPWLSKTNSCPLCRY 118
>UNIPROTKB|Q9P0P0 [details] [associations]
symbol:RNF181 "E3 ubiquitin-protein ligase RNF181"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC016753 CTD:51255 eggNOG:NOG294567
HOGENOM:HOG000031081 HOVERGEN:HBG108412 OMA:EEQYRQN EMBL:AF151072
EMBL:CR457165 EMBL:AK222700 EMBL:BC002803 IPI:IPI00292354
RefSeq:NP_057578.1 UniGene:Hs.356187 ProteinModelPortal:Q9P0P0
SMR:Q9P0P0 IntAct:Q9P0P0 STRING:Q9P0P0 PhosphoSite:Q9P0P0
DMDM:74761852 PaxDb:Q9P0P0 PRIDE:Q9P0P0 DNASU:51255
Ensembl:ENST00000306368 GeneID:51255 KEGG:hsa:51255 UCSC:uc002spv.1
GeneCards:GC02P085822 HGNC:HGNC:28037 HPA:HPA046112 MIM:612490
neXtProt:NX_Q9P0P0 PharmGKB:PA162401586 InParanoid:Q9P0P0
PhylomeDB:Q9P0P0 GenomeRNAi:51255 NextBio:54406 ArrayExpress:Q9P0P0
Bgee:Q9P0P0 CleanEx:HS_RNF181 Genevestigator:Q9P0P0 Uniprot:Q9P0P0
Length = 153
Score = 112 (44.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 91 STEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTD--SSCPVCRY 138
S + CPVCL +++ + I C+H FH SCI W +SCP+CRY
Sbjct: 70 SQAELKCPVCLLEFEEEETAIEMP-CHHLFHSSCILPWLSKTNSCPLCRY 118
>UNIPROTKB|I3LCU7 [details] [associations]
symbol:I3LCU7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CU914208
Ensembl:ENSSSCT00000028774 Uniprot:I3LCU7
Length = 95
Score = 112 (44.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 116 CNHSFHCSCISKWTDSSCPVCRYCQQQPEKSICFVCQTSENLWMCVICGFVGCGRYKGGH 175
C H CI+ DS+ ++ P C VC+++++ W+C+ C V CGRY GH
Sbjct: 3 CPHLSSSVCIAP--DSA----KFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGH 56
Query: 176 AIIHWKETE 184
A H+++ +
Sbjct: 57 AKKHYEDAQ 65
>DICTYBASE|DDB_G0283917 [details] [associations]
symbol:sir2A "UBP-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0070403 "NAD+
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001607
InterPro:IPR003000 Pfam:PF02146 Pfam:PF02148 PROSITE:PS50271
dictyBase:DDB_G0283917 GenomeReviews:CM000153_GR GO:GO:0070403
GO:GO:0046872 GO:GO:0008270 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AAFI02000058 eggNOG:COG0846
Gene3D:3.30.1600.10 InterPro:IPR026591 InterPro:IPR026590
PANTHER:PTHR11085 PROSITE:PS50305 RefSeq:XP_638798.1
ProteinModelPortal:Q54QE6 SMR:Q54QE6 EnsemblProtists:DDB0216430
GeneID:8624322 KEGG:ddi:DDB_G0283917 InParanoid:Q54QE6 KO:K11412
OMA:CNDESEN Uniprot:Q54QE6
Length = 512
Score = 134 (52.2 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 22/59 (37%), Positives = 28/59 (47%)
Query: 148 CFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGDNYVH 206
C C W+C+ CG V C R+ GHA H++ T+H S W Y D YVH
Sbjct: 34 CHACNDESENWICMTCGVVSCSRHVNGHAGEHFENTKHPISASFSDHSFWCYTCDTYVH 92
>TAIR|locus:1009023242 [details] [associations]
symbol:AT3G60966 "AT3G60966" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:DQ487553 IPI:IPI00656861
RefSeq:NP_001030907.1 UniGene:At.70726 UniGene:At.73258
ProteinModelPortal:Q1G3N1 SMR:Q1G3N1 EnsemblPlants:AT3G60966.1
GeneID:3769752 KEGG:ath:AT3G60966 TAIR:At3g60966 OMA:CEYITVS
PhylomeDB:Q1G3N1 Genevestigator:Q2V3M4 Uniprot:Q1G3N1
Length = 139
Score = 110 (43.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 20/53 (37%), Positives = 25/53 (47%)
Query: 87 APASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTD--SSCPVCR 137
A + P C VCL+ ++ TIC H FH CI W S CP+CR
Sbjct: 52 AENDDSSPPFCAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCR 104
>TAIR|locus:2207066 [details] [associations]
symbol:AT1G72220 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:AC067754 EMBL:AY052232 EMBL:BT002303 EMBL:AY084564
IPI:IPI00537254 PIR:G96745 RefSeq:NP_177367.1 UniGene:At.26428
ProteinModelPortal:Q8LFY8 SMR:Q8LFY8 EnsemblPlants:AT1G72220.1
GeneID:843554 KEGG:ath:AT1G72220 TAIR:At1g72220
HOGENOM:HOG000034163 InParanoid:Q8LFY8 OMA:INSITIC PhylomeDB:Q8LFY8
ProtClustDB:CLSN2912699 Genevestigator:Q8LFY8 GermOnline:AT1G72220
Uniprot:Q8LFY8
Length = 413
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDS--SCPVCR 137
E+ CPVCL ++D S L CNH+FH SCI W S +CP+CR
Sbjct: 173 ERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCR 219
>UNIPROTKB|D6RBV3 [details] [associations]
symbol:USP45 "HCG17265, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS50271
EMBL:CH471051 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 EMBL:AL137784 EMBL:AL513550
HGNC:HGNC:20080 ChiTaRS:USP45 IPI:IPI00552770 SMR:D6RBV3
Ensembl:ENST00000329966 Ensembl:ENST00000472914 UCSC:uc003pqa.3
HOGENOM:HOG000138193 Uniprot:D6RBV3
Length = 289
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/144 (25%), Positives = 67/144 (46%)
Query: 86 PAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW-TDSSCPVCRYCQQQPE 144
P A +++P+ P + D G+ +H+ + + + ++ VC C ++
Sbjct: 11 PEKAKRSKRPTVPHDEDSSDDIAVGLTCQHVSHAISVNHVKRAIAENLWSVCSECLKERR 70
Query: 145 KSICFVCQTSENLWMCVICGFVGCGRY-KGGHAIIHWKE--TE-HCYSLELETQRVWDYA 200
+ TS+ +W+C+ CGF GCG+ + H++ H+K TE HC + L T +W Y
Sbjct: 71 FYDGQLVLTSD-IWLCLKCGFQGCGKNSESQHSLKHFKSSRTEPHCIIINLSTWIIWCYE 129
Query: 201 GDNYVHRLIQSKTDGKLVE-LNSH 223
D + K ++V+ L H
Sbjct: 130 CDEKLSTHCNKKVLAQIVDFLQKH 153
>TAIR|locus:2062008 [details] [associations]
symbol:AT2G47560 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000034169 ProtClustDB:CLSN2683616 EMBL:AC002535
EMBL:BT003983 EMBL:BT005009 IPI:IPI00533213 PIR:T00428
RefSeq:NP_182278.1 UniGene:At.12430 UniGene:At.66383
ProteinModelPortal:O22255 SMR:O22255 EnsemblPlants:AT2G47560.1
GeneID:819369 KEGG:ath:AT2G47560 TAIR:At2g47560 eggNOG:NOG326521
InParanoid:O22255 OMA:PIENGSK PhylomeDB:O22255
Genevestigator:O22255 GermOnline:AT2G47560 Uniprot:O22255
Length = 227
Score = 125 (49.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 23/58 (39%), Positives = 30/58 (51%)
Query: 88 PASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW--TDSSCPVCRYCQQQP 143
P E+ C VCL +++ G L C HSFH CI W + S+CP+CR Q P
Sbjct: 99 PPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPP 156
>UNIPROTKB|E9PQP0 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0016477
"cell migration" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50271 GO:GO:0007411 GO:GO:0016477 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0044297
GO:GO:0004221 HGNC:HGNC:20059 ChiTaRS:USP33 EMBL:AC114487
IPI:IPI00975608 ProteinModelPortal:E9PQP0 SMR:E9PQP0
Ensembl:ENST00000524536 ArrayExpress:E9PQP0 Bgee:E9PQP0
Uniprot:E9PQP0
Length = 202
Score = 123 (48.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 144 EKSI--CFVCQTS-ENLWMCVI--CGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWD 198
+KS+ C C+ NLW C+ C +VGCG + H+ IH +ET+H ++ L T RVW
Sbjct: 55 QKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWC 114
Query: 199 YA 200
YA
Sbjct: 115 YA 116
>UNIPROTKB|E2QRF0 [details] [associations]
symbol:USP45 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 EMBL:AL137784 EMBL:AL513550
HGNC:HGNC:20080 ChiTaRS:USP45 IPI:IPI00966628
ProteinModelPortal:E2QRF0 SMR:E2QRF0 Ensembl:ENST00000369233
ArrayExpress:E2QRF0 Bgee:E2QRF0 Uniprot:E2QRF0
Length = 766
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 78/325 (24%), Positives = 137/325 (42%)
Query: 86 PAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW-TDSSCPVCRYCQQQPE 144
P A +++P+ P + D G+ +H+ + + + ++ VC C ++
Sbjct: 11 PEKAKRSKRPTVPHDEDSSDDIAVGLTCQHVSHAISVNHVKRAIAENLWSVCSECLKERR 70
Query: 145 KSICFVCQTSENLWMCVICGFVGCGRY-KGGHAIIHWKE--TE-HCYSLELETQRVWDYA 200
+ TS+ +W+C+ CGF GCG+ + H++ H+K TE HC + L T +W Y
Sbjct: 71 FYDGQLVLTSD-IWLCLKCGFQGCGKNSESQHSLKHFKSSRTEPHCIIINLSTWIIWCYE 129
Query: 201 GDNYVHRLIQSKTDGKLVE-LNSHCLHGKDNCGS-----CD--C----VDSGTSDALLSS 248
D + K ++V+ L H + + S C+ C + G LS
Sbjct: 130 CDEKLSTHCNKKVLAQIVDFLQKHASKTQTSAFSRIMKLCEEKCETDEIQKGGKCRNLS- 188
Query: 249 KVEAIVNEYNE-LLAAQLEN-QKIYYET-LLQEAKEETEKIISEAVKKAIAQKLQKMQAK 305
V I N N A ++N + Y T L+ E KE + K+ + + +L + +
Sbjct: 189 -VRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKL---KIFPSSDSQLDPLVVE 244
Query: 306 LDRCVREKK----FLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLRD 361
L R FL + E K K +++ ++ A R KD + QDS+ L
Sbjct: 245 LSRPGPLTSALFLFLHSMKETE-KGPLSPKVLFNQLCQK---APRFKDFQQQDSQELLHY 300
Query: 362 LMAYLEAEKTLQ-QLSISNEIKDGT 385
L+ + E+T + Q SI + T
Sbjct: 301 LLDAVRTEETKRIQASILKAFNNPT 325
>TAIR|locus:2028436 [details] [associations]
symbol:AT1G49230 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
EMBL:AC016041 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
PIR:G96528 HOGENOM:HOG000237642 ProtClustDB:CLSN2682468
EMBL:BT010489 EMBL:AK176235 EMBL:AK176512 IPI:IPI00522198
RefSeq:NP_175349.1 UniGene:At.43788 ProteinModelPortal:Q6NQG7
SMR:Q6NQG7 EnsemblPlants:AT1G49230.1 GeneID:841346
KEGG:ath:AT1G49230 TAIR:At1g49230 InParanoid:Q6NQG7 OMA:NTGVKRK
PhylomeDB:Q6NQG7 Genevestigator:Q6NQG7 GermOnline:AT1G49230
Uniprot:Q6NQG7
Length = 219
Score = 124 (48.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/70 (41%), Positives = 38/70 (54%)
Query: 88 PASSTEQPSCPVCL-ERLDQDTSGILTTICNHSFHCSCISKW--TDSSCPVCRYCQQQPE 144
P TE C +CL E + ++ +L T C+H FH CI KW + SSCP CR+C Q
Sbjct: 125 PGLDTE---CAICLSEFVAEERVKLLPT-CHHGFHVRCIDKWLSSHSSCPTCRHCLIQTC 180
Query: 145 KSICFVCQTS 154
+ I QTS
Sbjct: 181 EKIADCSQTS 190
>UNIPROTKB|Q70EL2 [details] [associations]
symbol:USP45 "Ubiquitin carboxyl-terminal hydrolase 45"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 EMBL:AL137784 EMBL:AL513550 HSSP:P40818
eggNOG:COG5207 HOGENOM:HOG000154755 HOVERGEN:HBG062704 KO:K11844
EMBL:AJ583819 EMBL:AL713747 EMBL:AL832030 EMBL:BC005991
EMBL:BC150648 EMBL:BC157838 IPI:IPI00736634 IPI:IPI00738106
IPI:IPI00967505 RefSeq:NP_001073950.1 UniGene:Hs.143410
ProteinModelPortal:Q70EL2 SMR:Q70EL2 IntAct:Q70EL2 STRING:Q70EL2
MEROPS:C19.064 PhosphoSite:Q70EL2 DMDM:296453002 PaxDb:Q70EL2
PRIDE:Q70EL2 DNASU:85015 Ensembl:ENST00000327681
Ensembl:ENST00000392738 Ensembl:ENST00000500704 GeneID:85015
KEGG:hsa:85015 UCSC:uc003ppw.2 UCSC:uc003ppx.2 CTD:85015
GeneCards:GC06M099925 H-InvDB:HIX0006090 HGNC:HGNC:20080
HPA:HPA029602 HPA:HPA029604 neXtProt:NX_Q70EL2 PharmGKB:PA134889604
InParanoid:Q70EL2 OMA:CEEKCET ChiTaRS:USP45 GenomeRNAi:85015
NextBio:75631 ArrayExpress:Q70EL2 Bgee:Q70EL2 CleanEx:HS_USP45
Genevestigator:Q70EL2 Uniprot:Q70EL2
Length = 814
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 78/325 (24%), Positives = 137/325 (42%)
Query: 86 PAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW-TDSSCPVCRYCQQQPE 144
P A +++P+ P + D G+ +H+ + + + ++ VC C ++
Sbjct: 11 PEKAKRSKRPTVPHDEDSSDDIAVGLTCQHVSHAISVNHVKRAIAENLWSVCSECLKERR 70
Query: 145 KSICFVCQTSENLWMCVICGFVGCGRY-KGGHAIIHWKE--TE-HCYSLELETQRVWDYA 200
+ TS+ +W+C+ CGF GCG+ + H++ H+K TE HC + L T +W Y
Sbjct: 71 FYDGQLVLTSD-IWLCLKCGFQGCGKNSESQHSLKHFKSSRTEPHCIIINLSTWIIWCYE 129
Query: 201 GDNYVHRLIQSKTDGKLVE-LNSHCLHGKDNCGS-----CD--C----VDSGTSDALLSS 248
D + K ++V+ L H + + S C+ C + G LS
Sbjct: 130 CDEKLSTHCNKKVLAQIVDFLQKHASKTQTSAFSRIMKLCEEKCETDEIQKGGKCRNLS- 188
Query: 249 KVEAIVNEYNE-LLAAQLEN-QKIYYET-LLQEAKEETEKIISEAVKKAIAQKLQKMQAK 305
V I N N A ++N + Y T L+ E KE + K+ + + +L + +
Sbjct: 189 -VRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKL---KIFPSSDSQLDPLVVE 244
Query: 306 LDRCVREKK----FLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLRD 361
L R FL + E K K +++ ++ A R KD + QDS+ L
Sbjct: 245 LSRPGPLTSALFLFLHSMKETE-KGPLSPKVLFNQLCQK---APRFKDFQQQDSQELLHY 300
Query: 362 LMAYLEAEKTLQ-QLSISNEIKDGT 385
L+ + E+T + Q SI + T
Sbjct: 301 LLDAVRTEETKRIQASILKAFNNPT 325
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 108 (43.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCIS-KWTDSS----CPVCRYC 139
E+ SCP+CLE L +D +T C H+F SC+S W D CPVCR+C
Sbjct: 12 EESSCPICLEYL-KDP---VTINCGHNFCRSCLSVSWKDLDDTFPCPVCRFC 59
>UNIPROTKB|B4DV65 [details] [associations]
symbol:USP3 "cDNA FLJ60902, highly similar to Ubiquitin
carboxyl-terminal hydrolase 3 (EC 3.1.2.15)" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 GO:GO:0008270 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC118274 EMBL:AC007950 UniGene:Hs.458499
HGNC:HGNC:12626 ChiTaRS:USP3 EMBL:AK300948 IPI:IPI01009992
SMR:B4DV65 STRING:B4DV65 Ensembl:ENST00000536001 Uniprot:B4DV65
Length = 156
Score = 112 (44.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 116 CNHSFHCSCISKWTDSSCPVCRYCQQQPEKSICFVCQTSENLWMCVICGFVGCGRYKGGH 175
C H CI+ DS+ ++ P C VC+++++ W+C+ C V CGRY GH
Sbjct: 3 CPHLSSSVCIAP--DSA----KFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGH 56
Query: 176 AIIHWKETE 184
A H+++ +
Sbjct: 57 AKKHYEDAQ 65
>TAIR|locus:2169712 [details] [associations]
symbol:AT5G05530 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB005241
HSSP:P28990 EMBL:BT005669 EMBL:AK118964 IPI:IPI00524026
RefSeq:NP_196172.1 UniGene:At.32987 ProteinModelPortal:Q9FFG2
SMR:Q9FFG2 EnsemblPlants:AT5G05530.1 GeneID:830436
KEGG:ath:AT5G05530 TAIR:At5g05530 eggNOG:NOG261368
HOGENOM:HOG000152441 OMA:NECTICL PhylomeDB:Q9FFG2
ProtClustDB:CLSN2916375 Genevestigator:Q9FFG2 Uniprot:Q9FFG2
Length = 199
Score = 120 (47.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 33/88 (37%), Positives = 44/88 (50%)
Query: 53 GRQFNSLEEEVCHVLFTVDVQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGIL 112
GR F L+ E V + + + G+T + PA S T C +CLE L D I
Sbjct: 110 GRAFE-LKAEAEDVEYHLMEESKGWTTCI----PAK-SITPVNECTICLEELCHDEESIE 163
Query: 113 TTICNHSFHCSCISKW--TDSSCPVCRY 138
T C H FH C+ +W T SSCP+CR+
Sbjct: 164 THDCCHVFHKLCLWRWIRTKSSCPLCRH 191
>UNIPROTKB|F1N2E6 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
EMBL:DAAA02040907 EMBL:DAAA02040908 IPI:IPI00732393
UniGene:Bt.43398 ProteinModelPortal:F1N2E6
Ensembl:ENSBTAT00000007366 ArrayExpress:F1N2E6 Uniprot:F1N2E6
Length = 488
Score = 88 (36.0 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 36/143 (25%), Positives = 70/143 (48%)
Query: 249 KVEAIVNEYNELLAAQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDR 308
K V+ +LL E++K+ L E +E + +++A+ + + +QA L R
Sbjct: 91 KTGLCVHHEEKLLLFCKEDRKVICR--LCERSQEHHGHHTFLMEEALKESQEMLQAALTR 148
Query: 309 CVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDK-IQDSEAQLRDLMAYLE 367
+E++ + L ++ + + WK +I ER+++ + I DSE Q R+L E
Sbjct: 149 LRKEQQKAEKLEADIREERTSWKYQIQT--ERQRIQTEFNQLRSILDSEEQ-RELQKLEE 205
Query: 368 AEK-TLQQLSISNE--IKDGTVL 387
EK TL L+++ ++ G +L
Sbjct: 206 EEKKTLDSLAVAEAELVQQGELL 228
Score = 85 (35.0 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCIS-KWTD------SSCPVC 136
E+ SCP+C E L + L+ C HSF +CI+ K TD SSCPVC
Sbjct: 11 EEVSCPICRELLTEP----LSLGCGHSFCQTCITNKETDISLGGDSSCPVC 57
>UNIPROTKB|J9P676 [details] [associations]
symbol:USP45 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 KO:K11844 GeneTree:ENSGT00690000102047
CTD:85015 EMBL:AAEX03008557 RefSeq:XP_539054.3
Ensembl:ENSCAFT00000045531 GeneID:481933 KEGG:cfa:481933
Uniprot:J9P676
Length = 778
Score = 129 (50.5 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 38/145 (26%), Positives = 64/145 (44%)
Query: 86 PAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW-TDSSCPVCRYCQQQPE 144
P A ++P+ P + D G +H+ + + K ++ VC C + E
Sbjct: 11 PEKAKRNKRPAIPRDEDSSDDIPVGFTCQHISHAISVNHVKKAIAENVWSVCSECLK--E 68
Query: 145 KSICFVCQT-SENLWMCVICGFVGCGRY-KGGHAIIHWKE--TE-HCYSLELETQRVWDY 199
+ C ++W+C+ CGF GCGR + H++ H+K TE HC ++ L T +W Y
Sbjct: 69 RRFCDGQPVLPSDVWLCLKCGFQGCGRNSENHHSLRHYKSRRTESHCITISLSTWVIWCY 128
Query: 200 AGDNYVHRLIQSKTDGKLVE-LNSH 223
D + K + V+ L H
Sbjct: 129 ECDEKLSTHCNKKVLAQTVDFLQKH 153
>UNIPROTKB|E2QWZ1 [details] [associations]
symbol:USP45 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000102047
OMA:CEEKCET EMBL:AAEX03008557 Ensembl:ENSCAFT00000005638
Uniprot:E2QWZ1
Length = 798
Score = 129 (50.5 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 38/145 (26%), Positives = 64/145 (44%)
Query: 86 PAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW-TDSSCPVCRYCQQQPE 144
P A ++P+ P + D G +H+ + + K ++ VC C + E
Sbjct: 11 PEKAKRNKRPAIPRDEDSSDDIPVGFTCQHISHAISVNHVKKAIAENVWSVCSECLK--E 68
Query: 145 KSICFVCQT-SENLWMCVICGFVGCGRY-KGGHAIIHWKE--TE-HCYSLELETQRVWDY 199
+ C ++W+C+ CGF GCGR + H++ H+K TE HC ++ L T +W Y
Sbjct: 69 RRFCDGQPVLPSDVWLCLKCGFQGCGRNSENHHSLRHYKSRRTESHCITISLSTWVIWCY 128
Query: 200 AGDNYVHRLIQSKTDGKLVE-LNSH 223
D + K + V+ L H
Sbjct: 129 ECDEKLSTHCNKKVLAQTVDFLQKH 153
>UNIPROTKB|Q28CN3 [details] [associations]
symbol:usp33 "Ubiquitin carboxyl-terminal hydrolase 33"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004197
"cysteine-type endopeptidase activity" evidence=ISS] [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISS] [GO:0007411 "axon
guidance" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
protein signaling pathway" evidence=ISS] [GO:0016477 "cell
migration" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
GO:GO:0004221 eggNOG:COG5560 HOGENOM:HOG000286031
HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 EMBL:CR926290
EMBL:BC171081 RefSeq:NP_001016228.1 UniGene:Str.42260
ProteinModelPortal:Q28CN3 SMR:Q28CN3 GeneID:548982 KEGG:xtr:548982
Xenbase:XB-GENE-1016674 Uniprot:Q28CN3
Length = 892
Score = 129 (50.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 57/246 (23%), Positives = 97/246 (39%)
Query: 148 CFVCQT-SENLWMCVI--CGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGDNY 204
C C+ NLW C+ C +VGCG H+ +H ++T+HC ++ L T RVW Y
Sbjct: 30 CQDCRVRGPNLWACLENGCSYVGCGESHVDHSTLHSQDTKHCLTVNLTTLRVWCYTCSKE 89
Query: 205 V---HRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDSGTSDALLSSKVEAIVNEYNELL 261
V +L T KL + SH K + + + A++S ++ + E +EL
Sbjct: 90 VFLDRKLSTQPTSAKLQD--SHTQESKMSSSLTLKIPA----AVVSENLDIELEEEDELK 143
Query: 262 AAQLENQKIYYETLLQEAKEETEKIISEAVKKAI-AQKLQKMQAKLDRCVREKKFLDDLN 320
L K T A + + L + K C +K + D+
Sbjct: 144 TRGLTGLKNIGNTCYMNAALQALSNCPPLTHYFLDCGGLARTDKKPALCKSYQKLMSDIW 203
Query: 321 ENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLRDLMAYLEAEKTLQQLSISNE 380
KN+ + + + + + + QD++ LR LM L E Q + + +
Sbjct: 204 H---KNRPGFVIPTNLFQGIKSVNPTFRGYSQQDAQEFLRCLMDVLHEELKEQIVEVEED 260
Query: 381 IKDGTV 386
+ G V
Sbjct: 261 AQTGIV 266
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 129 (50.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 28/90 (31%), Positives = 43/90 (47%)
Query: 131 SSCPVCRYCQQQPEKSI-----CFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEH 185
++CP + + P I C CQ +W C+ C CGR+ HA++H + H
Sbjct: 853 ATCPHLKEVKPLPPAKINARTACSECQIGAEVWTCLTCYKYNCGRFVNEHAMMHHLSSSH 912
Query: 186 CYSLELETQRVWDYAGDNYVHR--LIQSKT 213
+L + VW Y D+YVH LI +K+
Sbjct: 913 PMALSMADLSVWCYPCDSYVHNPALIGAKS 942
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 129 (50.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 28/90 (31%), Positives = 43/90 (47%)
Query: 131 SSCPVCRYCQQQPEKSI-----CFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEH 185
++CP + + P I C CQ +W C+ C CGR+ HA++H + H
Sbjct: 855 ATCPHLKEVKPLPPAKINARTACSECQIGAEVWTCLTCYKYNCGRFVNEHAMMHHLSSSH 914
Query: 186 CYSLELETQRVWDYAGDNYVHR--LIQSKT 213
+L + VW Y D+YVH LI +K+
Sbjct: 915 PMALSMADLSVWCYPCDSYVHNPALIGAKS 944
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 129 (50.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 28/90 (31%), Positives = 43/90 (47%)
Query: 131 SSCPVCRYCQQQPEKSI-----CFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEH 185
++CP + + P I C CQ +W C+ C CGR+ HA++H + H
Sbjct: 855 ATCPHLKEVKPLPPAKINARTACSECQIGAEVWTCLTCYKYNCGRFVNEHAMMHHLSSSH 914
Query: 186 CYSLELETQRVWDYAGDNYVHR--LIQSKT 213
+L + VW Y D+YVH LI +K+
Sbjct: 915 PMALSMADLSVWCYPCDSYVHNPALIGAKS 944
>TAIR|locus:505006415 [details] [associations]
symbol:RHB1A "RING-H2 finger B1A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000005881
EMBL:BT024583 EMBL:AK228408 IPI:IPI00549137 RefSeq:NP_567171.1
RefSeq:NP_974488.1 UniGene:At.10854 ProteinModelPortal:Q2HIJ8
SMR:Q2HIJ8 PRIDE:Q2HIJ8 EnsemblPlants:AT4G00335.1
EnsemblPlants:AT4G00335.2 GeneID:828093 KEGG:ath:AT4G00335
TAIR:At4g00335 eggNOG:NOG324180 InParanoid:Q2HIJ8 OMA:WIERSDR
PhylomeDB:Q2HIJ8 ProtClustDB:CLSN2697998 Genevestigator:Q2HIJ8
Uniprot:Q2HIJ8
Length = 190
Score = 116 (45.9 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDSS--CPVC 136
E+ CP+C E D + LTT C H FH SC+ +W + S CP+C
Sbjct: 135 EEDCCPICFEDYDVENPR-LTTKCEHEFHLSCLLEWIERSDRCPIC 179
>TAIR|locus:2034934 [details] [associations]
symbol:AT1G18770 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC011809
eggNOG:NOG268870 IPI:IPI00542029 RefSeq:NP_173312.1
UniGene:At.51668 ProteinModelPortal:Q3ED97 SMR:Q3ED97
EnsemblPlants:AT1G18770.1 GeneID:838459 KEGG:ath:AT1G18770
TAIR:At1g18770 HOGENOM:HOG000131773 InParanoid:Q3ED97 OMA:NAKIDGY
PhylomeDB:Q3ED97 ProtClustDB:CLSN2914190 Genevestigator:Q3ED97
Uniprot:Q3ED97
Length = 106
Score = 102 (41.0 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 90 SSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW--TDSSCPVCRY 138
SST + C +CLE + ++T C H F C+ KW T+ SCP+CR+
Sbjct: 53 SSTGE-MCIICLEEFSEGRR-VVTLPCGHDFDDECVLKWFETNHSCPLCRF 101
>UNIPROTKB|E1C214 [details] [associations]
symbol:USP16 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045901 "positive regulation of translational
elongation" evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0005634
GO:GO:0045893 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004197 GO:GO:0016578 GO:GO:0004843
GO:GO:0004221 EMBL:AC147443 GeneTree:ENSGT00690000102047
OMA:CKNVAEE IPI:IPI00591883 Ensembl:ENSGALT00000025494
Uniprot:E1C214
Length = 809
Score = 112 (44.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 27/77 (35%), Positives = 38/77 (49%)
Query: 133 CPVCRYCQQQPEKSICFVCQTSENLWMCVICGFVGCGRY-KGGHAIIHW---KETEHCYS 188
C C+ + EKS S ++W+C+ CG GCGR + HA+ H+ + HC
Sbjct: 32 CQDCKADNKTQEKSE-EETDESPSIWLCLKCGHRGCGRNSQEQHALKHYTTPRSDPHCLV 90
Query: 189 LELETQRVWDYAGDNYV 205
L L+ VW Y DN V
Sbjct: 91 LSLDNWSVWCYICDNEV 107
Score = 61 (26.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 20/87 (22%), Positives = 46/87 (52%)
Query: 279 AKEETEKIISEAVKKAIAQKLQ-KMQAKL----DRCVREKKFLDDLNENLLKNQEMWKAK 333
+K +K +A K+A +Q+ Q K+Q K+ D C E+ D + + + + ++
Sbjct: 419 SKHLQKKAKKQAKKQAKSQRRQQKLQGKVLQLTDICATEESEKDVVCDQ--EGEAEINSE 476
Query: 334 ISEIEEREKMALRAKDDKIQDSEAQLR 360
IS++++ E+ + KDD + ++ ++
Sbjct: 477 ISDVKQEEESSNDCKDDYLTQNDLNIQ 503
Score = 58 (25.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 26/106 (24%), Positives = 56/106 (52%)
Query: 275 LLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNEN---LLKNQEMWK 331
LL+EAK + ++ + ++ +L K+ + +FL ++ E ++ +E++
Sbjct: 209 LLKEAKMPDTTVKIDSPELSMEPQLVKLDQPGPLTLAMHQFLTEMQETKRGVVTPKELF- 267
Query: 332 AKISEIEEREKMALRAKDDKIQDSEAQLRDLMAYLEAEKTLQQLSI 377
A++ K A+R K + QDS+ LR L+ + AE+ +Q++S+
Sbjct: 268 AQVC------KKAIRFKGYQQQDSQELLRYLLDGMRAEE-IQRISV 306
>ZFIN|ZDB-GENE-030131-731 [details] [associations]
symbol:hmmr "hyaluronan-mediated motility receptor
(RHAMM)" species:7955 "Danio rerio" [GO:0005540 "hyaluronic acid
binding" evidence=IEA] InterPro:IPR026203 ZFIN:ZDB-GENE-030131-731
GO:GO:0005540 PANTHER:PTHR18956 GeneTree:ENSGT00390000007135
EMBL:BX088535 IPI:IPI00961899 Ensembl:ENSDART00000105902
Bgee:F1R2Q6 Uniprot:F1R2Q6
Length = 904
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 44/171 (25%), Positives = 91/171 (53%)
Query: 210 QSKTDGKLVELNSHCL--HGKDNCGSCDCVDSGTSDALLSSKVEAIVNEYNELLAAQ--L 265
++K D K EL+ + GK D + T+ +L + + + + + E A L
Sbjct: 184 KNKLDAKDKELSFLQISSEGKVKVLETDLETAKTTFRVLQDRNKDLEDLHQETRAQNELL 243
Query: 266 ENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKL-DRCVREKKFLDDLNENLL 324
EN+ ++QE +EE + + ++ + +++Q ++ KL D+ E++ + D ENL
Sbjct: 244 ENEMDKLHNIIQELREEIKAL--QSYLDSANEEIQDLRIKLQDKSTMERR-VSDAQENLS 300
Query: 325 KNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLRDLMAYLEA-EKTLQQ 374
+ ++ + +E++E ++ AL+ K+D++Q S+ +LRD LE EK ++Q
Sbjct: 301 EVEQKLEKCTAELQECQE-ALKVKEDEVQRSKQELRDSQNALEEKEKEIEQ 350
>MGI|MGI:2685640 [details] [associations]
symbol:Trim75 "tripartite motif-containing 75" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:2685640 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HSSP:Q9CQJ4 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00700000104307 OrthoDB:EOG4NP73C eggNOG:NOG254111
EMBL:AK136018 IPI:IPI00339960 RefSeq:NP_001028601.1
UniGene:Mm.334557 ProteinModelPortal:Q3UWZ0 SMR:Q3UWZ0 PRIDE:Q3UWZ0
Ensembl:ENSMUST00000095295 GeneID:333307 KEGG:mmu:333307 CTD:391714
InParanoid:Q3UWZ0 KO:K12037 OMA:NILVETI NextBio:399957 Bgee:Q3UWZ0
Genevestigator:Q3UWZ0 Uniprot:Q3UWZ0
Length = 467
Score = 100 (40.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 81 LEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISK-WTD----SSCPV 135
+ HV+ A ++ CP+CL+ D + +T C H+F SCI W SSCPV
Sbjct: 1 MAHVEVL-ARLQKETKCPICLD----DLTDPVTVECGHNFCRSCIKDFWAGQQATSSCPV 55
Query: 136 CRY-CQQQPEKS 146
CR+ CQ + +S
Sbjct: 56 CRHQCQHRNLRS 67
Score = 67 (28.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 30/129 (23%), Positives = 62/129 (48%)
Query: 262 AAQLENQKIY-YETLLQEAKEETEKIISEAVKKAIA--QKLQKMQAKL-DRCVREKKFLD 317
AA L + + Y LL+ +E + ++S K+ + ++ + +++L C + +FLD
Sbjct: 134 AASLHRKHLQDYSKLLKWEVKEIQGLMSALNKRTVTLREQAEAQRSQLTSECEKLMRFLD 193
Query: 318 DLNENLLKNQEMWKAKISEIEERE-KMALRAKDD--KIQDSEAQLRDLMAYLEAEKTLQQ 374
QE +A S +E+ E ++ R D+ ++ + LRDL+ +L L +
Sbjct: 194 ---------QEE-RAAFSRLEDEEMRLEKRLLDNIAALEHHGSSLRDLLRHLMLTGELSE 243
Query: 375 LSISNEIKD 383
+ + +KD
Sbjct: 244 AKMLSTVKD 252
>UNIPROTKB|F1RHN8 [details] [associations]
symbol:TRIM21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090086 "negative regulation of protein
deubiquitination" evidence=IEA] [GO:0070206 "protein trimerization"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0019005 GO:GO:0032088 GO:GO:0004842
GO:GO:0000209 GO:GO:0070206 InterPro:IPR017907 GO:GO:0051865
GO:GO:0045787 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 GO:GO:0031648 GO:GO:0006513 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0090086
GeneTree:ENSGT00690000101646 EMBL:CU915729
Ensembl:ENSSSCT00000016131 OMA:HITRIEA Uniprot:F1RHN8
Length = 469
Score = 96 (38.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 41/138 (29%), Positives = 66/138 (47%)
Query: 250 VEAIVNEYNELLAAQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQA-KL-- 306
+E EY E L LE L+ +E+ EK+ ++ K A K K++A KL
Sbjct: 128 IEEAAQEYQEKLQVALEK--------LRNKQEQAEKLEADIATKRAAWK-GKVEAHKLRI 178
Query: 307 -DRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKM-ALRAKDDKIQDSEAQLRDLMA 364
+ VR+K FL + + L+ K+ E EERE++ AL A + ++ L++L+A
Sbjct: 179 HEEFVRQKNFLAEEEQRQLQ-------KLEE-EEREQLKALGATEARLAQQSQALQELIA 230
Query: 365 YLEAEKTLQQLSISNEIK 382
LE L + E+K
Sbjct: 231 ELERRSRGPMLELLQEVK 248
Score = 71 (30.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCIS---KWTDSSCPVCR 137
++ +C +CL+ + + S C HSF CIS K S CPVCR
Sbjct: 12 DEVTCSICLDPMVEPVS----IECGHSFCQECISEVGKDGGSVCPVCR 55
>RGD|1310896 [details] [associations]
symbol:Trim6 "tripartite motif containing 6" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0070206 "protein trimerization" evidence=IEA;ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 RGD:1310896 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646
OrthoDB:EOG4229JJ KO:K11999 CTD:117854 EMBL:AC113720
IPI:IPI00394064 RefSeq:NP_001163932.1 UniGene:Rn.80076
ProteinModelPortal:D4A3L4 Ensembl:ENSRNOT00000023043 GeneID:293294
KEGG:rno:293294 UCSC:RGD:1310896 NextBio:635769 Uniprot:D4A3L4
Length = 488
Score = 88 (36.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 30/124 (24%), Positives = 67/124 (54%)
Query: 266 ENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNE--NL 323
E Q ++ E+L + +E+ E +E +K I +K + +++++ + + N+ ++
Sbjct: 139 EYQDMFQESLKKLRREQQE---AEKLKALIQEKRESWKSQVEP--ERHRIQTEFNQLRSI 193
Query: 324 LKNQEMWKAKISEIEEREKMAL--RAKDDKIQDSEAQLRDLMAYLEAEKTLQQLSISNEI 381
L +E + K E+EER+ +++ +A+ D I S+A L+DL++ LE + + ++
Sbjct: 194 LDREEQRELKKLEVEERKGLSVIEKAEGDLIHQSQA-LKDLISDLEHRCRGSTVELLQDV 252
Query: 382 KDGT 385
D T
Sbjct: 253 GDVT 256
Score = 80 (33.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTD---------SSCPVCRYCQQ 141
++ +CP+CLE L + L+ C HSF +CI +D SSCPVCR Q
Sbjct: 11 DEVTCPICLELLTEP----LSIDCGHSFCQACIIGNSDNSVLNPEGKSSCPVCRTVYQ 64
>TAIR|locus:2169063 [details] [associations]
symbol:AT5G47610 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AB025628 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 EMBL:AK175469 EMBL:AK176643 EMBL:AY085503
IPI:IPI00529585 RefSeq:NP_199572.1 UniGene:At.29885
ProteinModelPortal:Q9FGJ6 SMR:Q9FGJ6 EnsemblPlants:AT5G47610.1
GeneID:834811 KEGG:ath:AT5G47610 TAIR:At5g47610 eggNOG:NOG304426
InParanoid:Q9FGJ6 OMA:VISALIC PhylomeDB:Q9FGJ6
ProtClustDB:CLSN2714317 Genevestigator:Q9FGJ6 GermOnline:AT5G47610
Uniprot:Q9FGJ6
Length = 166
Score = 111 (44.1 bits), Expect = 0.00014, P = 0.00014
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 94 QPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW--TDSSCPVCR 137
+ C +CL +Q S + C H FH CI KW T SSCP CR
Sbjct: 104 EAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCR 149
>UNIPROTKB|E9PLK7 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0016477
"cell migration" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
GO:GO:0007411 GO:GO:0016477 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0044297 HGNC:HGNC:20059 ChiTaRS:USP33
EMBL:AC114487 IPI:IPI00976300 ProteinModelPortal:E9PLK7 SMR:E9PLK7
Ensembl:ENST00000530709 ArrayExpress:E9PLK7 Bgee:E9PLK7
Uniprot:E9PLK7
Length = 111
Score = 100 (40.3 bits), Expect = 0.00014, P = 0.00014
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 144 EKSI--CFVCQTS-ENLWMCVI--CGFVGCGRYKGGHAIIHWKETEHCYSLELETQR 195
+KS+ C C+ NLW C+ C +VGCG + H+ IH +ET+H ++ L T R
Sbjct: 55 QKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLR 111
>UNIPROTKB|G3MWZ9 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
EMBL:DAAA02040907 EMBL:DAAA02040908 Ensembl:ENSBTAT00000063426
Uniprot:G3MWZ9
Length = 844
Score = 88 (36.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 36/143 (25%), Positives = 70/143 (48%)
Query: 249 KVEAIVNEYNELLAAQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDR 308
K V+ +LL E++K+ L E +E + +++A+ + + +QA L R
Sbjct: 447 KTGLCVHHEEKLLLFCKEDRKVICR--LCERSQEHHGHHTFLMEEALKESQEMLQAALTR 504
Query: 309 CVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDK-IQDSEAQLRDLMAYLE 367
+E++ + L ++ + + WK +I ER+++ + I DSE Q R+L E
Sbjct: 505 LRKEQQKAEKLEADIREERTSWKYQIQT--ERQRIQTEFNQLRSILDSEEQ-RELQKLEE 561
Query: 368 AEK-TLQQLSISNE--IKDGTVL 387
EK TL L+++ ++ G +L
Sbjct: 562 EEKKTLDSLAVAEAELVQQGELL 584
Score = 85 (35.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCIS-KWTD------SSCPVC 136
E+ SCP+C E L + L+ C HSF +CI+ K TD SSCPVC
Sbjct: 367 EEVSCPICRELLTEP----LSLGCGHSFCQTCITNKETDISLGGDSSCPVC 413
Score = 84 (34.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDSSCPVCRYCQQQPEKSICFVCQ 152
++ +CP+CLE L + L+ C HSF +CI+ S P Q +S C VCQ
Sbjct: 39 DEVTCPICLELLTEP----LSIDCGHSFCQACITADNKESMP------GQEGQSRCPVCQ 88
Query: 153 TSENLWM 159
TS W+
Sbjct: 89 TS--YWL 93
Score = 82 (33.9 bits), Expect = 0.00085, Sum P(2) = 0.00084
Identities = 32/105 (30%), Positives = 59/105 (56%)
Query: 266 ENQKIYYETL--LQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNENL 323
E Q+ + E+L L++ ++E EK+ + +K I+ K Q M+ + R +K+F D L L
Sbjct: 167 EYQEKFQESLKKLRQEQQEAEKLAAVIREKRISWKNQ-MEPERHRI--QKQF-DHLRSIL 222
Query: 324 LKNQEMWKAKISEIEERE-KMALRAKDDKIQDSEAQLRDLMAYLE 367
K ++ K+ E E R + A+ + +Q S++ LR+L++ LE
Sbjct: 223 DKEEQRQLKKLEEEERRGLNIIAEAEVELVQQSQS-LRELISDLE 266
>MGI|MGI:2159711 [details] [associations]
symbol:Usp33 "ubiquitin specific peptidase 33" species:10090
"Mus musculus" [GO:0001664 "G-protein coupled receptor binding"
evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0008152 "metabolic
process" evidence=ISA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=ISO]
[GO:0008277 "regulation of G-protein coupled receptor protein
signaling pathway" evidence=ISO] [GO:0016477 "cell migration"
evidence=IMP] [GO:0016579 "protein deubiquitination" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0044297 "cell
body" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISO]
[GO:0071108 "protein K48-linked deubiquitination" evidence=ISO]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 MGI:MGI:2159711 GO:GO:0048471
GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
GO:GO:0044297 GO:GO:0004843 GO:GO:0004221 HSSP:Q93009
eggNOG:COG5560 GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 OMA:TMEEDKS
OrthoDB:EOG4B8JC9 EMBL:AF383174 EMBL:BC005506 EMBL:BC031366
EMBL:BC089315 EMBL:AK143844 IPI:IPI00319995 IPI:IPI00798461
RefSeq:NP_001239415.1 RefSeq:NP_573510.2 UniGene:Mm.258320
ProteinModelPortal:Q8R5K2 SMR:Q8R5K2 STRING:Q8R5K2
PhosphoSite:Q8R5K2 PaxDb:Q8R5K2 PRIDE:Q8R5K2 DNASU:170822
Ensembl:ENSMUST00000026507 Ensembl:ENSMUST00000117492 GeneID:170822
KEGG:mmu:170822 UCSC:uc008rti.1 UCSC:uc008rtj.1 InParanoid:Q8R5K2
NextBio:370477 Bgee:Q8R5K2 Genevestigator:Q8R5K2 Uniprot:Q8R5K2
Length = 909
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 112 LTTICNHSFHCSCISKWTDSSCPVCRYCQQQPEKSICFVCQT-SENLWMCVI--CGFVGC 168
+TT NH H + + T Q C C+ NLW C+ C +VGC
Sbjct: 1 MTTFRNHCPHLDSVGEITKEDLI-------QKSLGACQDCKVRGPNLWACLENRCSYVGC 53
Query: 169 GRYKGGHAIIHWKETEHCYSLELETQRVWDYA 200
G + H+ IH +ET+H ++ L T RVW YA
Sbjct: 54 GESQVDHSTIHSQETKHYLTVNLTTLRVWCYA 85
>MGI|MGI:2137352 [details] [associations]
symbol:Trim6 "tripartite motif-containing 6" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070206 "protein
trimerization" evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:2137352
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ KO:K11999 CTD:117854
EMBL:AK033396 EMBL:AK049238 EMBL:BC138965 EMBL:AF220031
IPI:IPI00407811 RefSeq:NP_001013637.1 UniGene:Mm.274843
ProteinModelPortal:Q8BGE7 SMR:Q8BGE7 PhosphoSite:Q8BGE7
PRIDE:Q8BGE7 Ensembl:ENSMUST00000098180 GeneID:94088 KEGG:mmu:94088
UCSC:uc009ivq.1 eggNOG:NOG238217 InParanoid:B2RSQ8 OMA:KSQMEPE
NextBio:352065 Bgee:Q8BGE7 CleanEx:MM_TRIM6 Genevestigator:Q8BGE7
Uniprot:Q8BGE7
Length = 488
Score = 91 (37.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 40/177 (22%), Positives = 88/177 (49%)
Query: 215 GKLVELNSHCLHGKDNCGSCDCVDSGTSDALLSSKVEAIVNEYNELL--AAQLENQKIYY 272
GK +E+ LHG+ C + G L + + + L+ AQ E Q ++
Sbjct: 89 GKQLEVIFCALHGEKL--QLFCKEDGKLICWLCERSQEHRGHHTFLMEEVAQ-EYQDMFQ 145
Query: 273 ETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNE--NLLKNQEMW 330
E+L + +E+ E +E +K I +K + +++++ +++ + + ++L +E
Sbjct: 146 ESLKKLRREQQE---AEKLKALIQEKRESWKSQVEP--EKRRIQTEFKQLRSILDREEQR 200
Query: 331 KAKISEIEEREKMAL--RAKDDKIQDSEAQLRDLMAYLEAEKTLQQLSISNEIKDGT 385
+ K E+EER+ +++ +A+ D I S++ L+DL++ LE + + ++ D T
Sbjct: 201 ELKKLEVEERKGLSIIEKAEGDLIHQSQS-LKDLISDLEHRCQGSTVELLQDVGDVT 256
Score = 76 (31.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 23/81 (28%), Positives = 37/81 (45%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCI---------SKWTDSSCPVCRYCQQ-- 141
++ +CP+CLE L + L+ C HSF CI + SSCPVCR Q
Sbjct: 11 DEVTCPICLELLTEP----LSIDCGHSFCQVCIIGNSNNSVFGQGGRSSCPVCRTSYQPG 66
Query: 142 --QPEKSICFVCQTSENLWMC 160
+P + + + + + +C
Sbjct: 67 NLRPNRHLAAIVKRLREVALC 87
>UNIPROTKB|E2QUN1 [details] [associations]
symbol:RNF181 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:51255 OMA:EEQYRQN
EMBL:AAEX03010937 RefSeq:XP_532978.2 ProteinModelPortal:E2QUN1
Ensembl:ENSCAFT00000012302 GeneID:475768 KEGG:cfa:475768
Uniprot:E2QUN1
Length = 153
Score = 107 (42.7 bits), Expect = 0.00018, P = 0.00018
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 90 SSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTD--SSCPVCRY 138
SS + CPVCL +++ + I C H FH +CI W +SCP+CR+
Sbjct: 69 SSQAELKCPVCLLEFEEEETAIEMP-CRHLFHSNCILPWLSKTNSCPLCRH 118
>UNIPROTKB|H0Y8J5 [details] [associations]
symbol:USP45 "Ubiquitin carboxyl-terminal hydrolase 45"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50271 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 EMBL:AL137784 EMBL:AL513550
HGNC:HGNC:20080 ChiTaRS:USP45 Ensembl:ENST00000496518
Uniprot:H0Y8J5
Length = 209
Score = 115 (45.5 bits), Expect = 0.00018, P = 0.00018
Identities = 32/117 (27%), Positives = 54/117 (46%)
Query: 116 CNHSFHCSCISKW----TDSSCPVCRYCQQQPEKSICFVCQTSENLWMCVICGFVGCGRY 171
C H H ++ ++ VC C ++ + TS+ +W+C+ CGF GCG+
Sbjct: 5 CQHVSHAISVNHVKRAIAENLWSVCSECLKERRFYDGQLVLTSD-IWLCLKCGFQGCGKN 63
Query: 172 -KGGHAIIHWKE--TE-HCYSLELETQRVWDYAGDNYVHRLIQSKTDGKLVE-LNSH 223
+ H++ H+K TE HC + L T +W Y D + K ++V+ L H
Sbjct: 64 SESQHSLKHFKSSRTEPHCIIINLSTWIIWCYECDEKLSTHCNKKVLAQIVDFLQKH 120
>TAIR|locus:2177866 [details] [associations]
symbol:AT5G41430 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AB006707 HOGENOM:HOG000141530 IPI:IPI00536823
RefSeq:NP_198958.1 UniGene:At.65616 ProteinModelPortal:Q9FN58
SMR:Q9FN58 EnsemblPlants:AT5G41430.1 GeneID:834144
KEGG:ath:AT5G41430 TAIR:At5g41430 eggNOG:NOG301420
InParanoid:Q9FN58 OMA:HEIIRIK PhylomeDB:Q9FN58
ProtClustDB:CLSN2686368 Genevestigator:Q9FN58 Uniprot:Q9FN58
Length = 161
Score = 109 (43.4 bits), Expect = 0.00020, P = 0.00020
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 60 EEEVCHVL-FTVDVQFT-GYTGSLEHVQ--PAPASSTEQPSCPVCLERLDQDTSGILTTI 115
+ E H++ ++F GY S+E ++ ++ C +CLE L+ I
Sbjct: 76 DNETGHLMPLHSQLEFKIGYRASIEEMEFKDIEKEGFDEIGCSICLEELEDGHEIIRIKK 135
Query: 116 CNHSFHCSCISKWT--DSSCPVCR 137
C H FH SCI W + SCP CR
Sbjct: 136 CRHVFHRSCIDSWLKQNRSCPNCR 159
>UNIPROTKB|Q5REG5 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
species:9601 "Pongo abelii" [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0007411 "axon guidance"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008277 "regulation of G-protein coupled receptor protein
signaling pathway" evidence=ISS] [GO:0016477 "cell migration"
evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0071108 "protein K48-linked deubiquitination" evidence=ISS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0007411
GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 GO:GO:0006897
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
HOGENOM:HOG000286031 HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037
CTD:23032 EMBL:CR857564 EMBL:CR860104 RefSeq:NP_001124855.1
UniGene:Pab.19411 ProteinModelPortal:Q5REG5 SMR:Q5REG5
GeneID:100171716 KEGG:pon:100171716 InParanoid:Q5REG5
Uniprot:Q5REG5
Length = 914
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 142 QPEKSICFVCQT-SENLWMCVI--CGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWD 198
Q + C C+ NLW C+ C +VGCG + H+ IH +ET+H ++ L T RVW
Sbjct: 24 QKSQGTCQDCKVRGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWC 83
Query: 199 YA 200
YA
Sbjct: 84 YA 85
>UNIPROTKB|K7GLC7 [details] [associations]
symbol:LOC100738479 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR000679 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50114 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 EMBL:CU856599
Ensembl:ENSSSCT00000034639 Uniprot:K7GLC7
Length = 487
Score = 84 (34.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 33/122 (27%), Positives = 67/122 (54%)
Query: 266 ENQKIYYETL--LQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNENL 323
E Q+ + E+L L++ ++E EK+ + +K + K Q M+ + R +K+F D L L
Sbjct: 139 EYQERFQESLKKLRQEQQEAEKLAALIREKRASWKNQ-MEPERHRI--QKQF-DQLRSIL 194
Query: 324 LKNQEMWKAKISEIEEREKMAL--RAKDDKIQDSEAQLRDLMAYLEAEKTLQQLSISNEI 381
K ++ K+ E EER+ +++ A+ + +Q S++ LR+L++ LE + ++
Sbjct: 195 DKEEQRQLRKLEE-EERKGLSVIAEAEGELLQQSQS-LRELISDLERRCQGSMTELLQDV 252
Query: 382 KD 383
+D
Sbjct: 253 RD 254
Score = 82 (33.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCISK----WT-----DSSCPVCR 137
E+ +CP+CLE L L+ C HSF +CI++ W +SSCPVC+
Sbjct: 11 EEVTCPLCLELLTDP----LSIDCGHSFCQACITQNSEEWRMDQGGESSCPVCQ 60
Score = 79 (32.9 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 31/140 (22%), Positives = 69/140 (49%)
Query: 249 KVEAIVNEYNEL---LAAQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAK 305
K++ E +L L + + + ++ L++E +E ++ E++KK + Q+ Q+ + K
Sbjct: 103 KLQLFCREDGQLICWLCERAQEHRGHHTFLMEEVAQEYQERFQESLKK-LRQEQQEAE-K 160
Query: 306 LDRCVREKK--FLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLRDLM 363
L +REK+ + + + + Q+ + S +++ E+ LR K+++ E + ++
Sbjct: 161 LAALIREKRASWKNQMEPERHRIQKQFDQLRSILDKEEQRQLR----KLEEEERKGLSVI 216
Query: 364 AYLEAEKTLQQLSISNEIKD 383
A E E Q S+ I D
Sbjct: 217 AEAEGELLQQSQSLRELISD 236
>UNIPROTKB|F1N541 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101646 KO:K11999
CTD:117854 EMBL:DAAA02040907 EMBL:DAAA02040908 IPI:IPI00883463
RefSeq:NP_001192118.1 UniGene:Bt.111657 Ensembl:ENSBTAT00000015712
GeneID:514492 KEGG:bta:514492 OMA:HHKHEYR NextBio:20871361
ArrayExpress:F1N541 Uniprot:F1N541
Length = 487
Score = 84 (34.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDSSCPVCRYCQQQPEKSICFVCQ 152
++ +CP+CLE L + L+ C HSF +CI+ S P Q +S C VCQ
Sbjct: 11 DEVTCPICLELLTEP----LSIDCGHSFCQACITADNKESMP------GQEGQSRCPVCQ 60
Query: 153 TSENLWM 159
TS W+
Sbjct: 61 TS--YWL 65
Score = 82 (33.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 32/105 (30%), Positives = 59/105 (56%)
Query: 266 ENQKIYYETL--LQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNENL 323
E Q+ + E+L L++ ++E EK+ + +K I+ K Q M+ + R +K+F D L L
Sbjct: 139 EYQEKFQESLKKLRQEQQEAEKLAAVIREKRISWKNQ-MEPERHRI--QKQF-DHLRSIL 194
Query: 324 LKNQEMWKAKISEIEERE-KMALRAKDDKIQDSEAQLRDLMAYLE 367
K ++ K+ E E R + A+ + +Q S++ LR+L++ LE
Sbjct: 195 DKEEQRQLKKLEEEERRGLNIIAEAEVELVQQSQS-LRELISDLE 238
>RGD|1561238 [details] [associations]
symbol:RGD1561238 "similar to ring finger protein 122 homolog"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1561238 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
IPI:IPI00394572 Ensembl:ENSRNOT00000031701 Uniprot:F1LZF5
Length = 95
Score = 98 (39.6 bits), Expect = 0.00024, P = 0.00024
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 96 SCPVCLERLD-QDTSGILTTICNHSFHCSCISKWTDSSCPVCRYCQQQPEKSICFVCQTS 154
+C VCLE +D G+L C H+FH C+ KW + C VC C K I +TS
Sbjct: 32 TCAVCLEDFKGKDELGVLP--CQHAFHRKCLVKWLEVRC-VCPMCN----KPIAGPTETS 84
Query: 155 ENL 157
+++
Sbjct: 85 QSI 87
>TAIR|locus:2062502 [details] [associations]
symbol:AT2G35420 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005314
EMBL:BT012632 IPI:IPI00523782 PIR:D84768 RefSeq:NP_181085.2
UniGene:At.48551 UniGene:At.66436 UniGene:At.67876
ProteinModelPortal:Q6NKR1 SMR:Q6NKR1 EnsemblPlants:AT2G35420.1
GeneID:818108 KEGG:ath:AT2G35420 TAIR:At2g35420 eggNOG:NOG326691
HOGENOM:HOG000034167 InParanoid:Q6NKR1 OMA:HISRIEV PhylomeDB:Q6NKR1
ProtClustDB:CLSN2915128 Genevestigator:Q6NKR1 Uniprot:Q6NKR1
Length = 254
Score = 116 (45.9 bits), Expect = 0.00026, P = 0.00026
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 97 CPVCLERL-DQDTSGILTTICNHSFHCSCISKWTD--SSCPVCRYCQQQP 143
C +CL D+DT ++T +C H FH +CI W + +CPVCR C+ P
Sbjct: 103 CAICLSEFSDEDTVRLIT-VCRHPFHSNCIDLWFELHKTCPVCR-CELDP 150
>RGD|1359698 [details] [associations]
symbol:Rnf181 "ring finger protein 181" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 RGD:1359698
Prosite:PS00518 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00530000062967 CTD:51255 eggNOG:NOG294567
HOGENOM:HOG000031081 HOVERGEN:HBG108412 OMA:EEQYRQN
OrthoDB:EOG40VVQW EMBL:BC079313 IPI:IPI00191490
RefSeq:NP_001007648.1 UniGene:Rn.94883 ProteinModelPortal:Q6AXU4
PRIDE:Q6AXU4 Ensembl:ENSRNOT00000016699 GeneID:297337
KEGG:rno:297337 UCSC:RGD:1359698 InParanoid:Q6AXU4 NextBio:642113
ArrayExpress:Q6AXU4 Genevestigator:Q6AXU4 Uniprot:Q6AXU4
Length = 165
Score = 109 (43.4 bits), Expect = 0.00026, P = 0.00026
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 90 SSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTD--SSCPVCRY 138
SS + CPVCL +++ + ++ C+H FH +CI W +SCP+CR+
Sbjct: 81 SSKAELKCPVCLLEFEEEET-VIEMPCHHLFHSNCILPWLSKTNSCPLCRH 130
>UNIPROTKB|Q6AXU4 [details] [associations]
symbol:Rnf181 "E3 ubiquitin-protein ligase RNF181"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 RGD:1359698 Prosite:PS00518
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00530000062967 CTD:51255 eggNOG:NOG294567
HOGENOM:HOG000031081 HOVERGEN:HBG108412 OMA:EEQYRQN
OrthoDB:EOG40VVQW EMBL:BC079313 IPI:IPI00191490
RefSeq:NP_001007648.1 UniGene:Rn.94883 ProteinModelPortal:Q6AXU4
PRIDE:Q6AXU4 Ensembl:ENSRNOT00000016699 GeneID:297337
KEGG:rno:297337 UCSC:RGD:1359698 InParanoid:Q6AXU4 NextBio:642113
ArrayExpress:Q6AXU4 Genevestigator:Q6AXU4 Uniprot:Q6AXU4
Length = 165
Score = 109 (43.4 bits), Expect = 0.00026, P = 0.00026
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 90 SSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTD--SSCPVCRY 138
SS + CPVCL +++ + ++ C+H FH +CI W +SCP+CR+
Sbjct: 81 SSKAELKCPVCLLEFEEEET-VIEMPCHHLFHSNCILPWLSKTNSCPLCRH 130
>TAIR|locus:4515102621 [details] [associations]
symbol:ATL1F species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GO:GO:0046872 GO:GO:0008270 EMBL:AC007767
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC084110
EMBL:DQ487502 EMBL:EF183179 IPI:IPI00519561 PIR:E86448
RefSeq:NP_001117398.1 UniGene:At.69078 ProteinModelPortal:Q9LQM2
SMR:Q9LQM2 PRIDE:Q9LQM2 EnsemblPlants:AT1G32361.1 GeneID:6240625
KEGG:ath:AT1G32361 TAIR:At1g32361 eggNOG:NOG250632 OMA:TIRLIST
PhylomeDB:Q9LQM2 ProtClustDB:CLSN2925449 Genevestigator:Q9LQM2
Uniprot:Q9LQM2
Length = 332
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 92 TEQPSCPVCL-ERLDQDTSGILTTICNHSFHCSCISKWTDS--SCPVCR 137
T+Q C +CL E +D DT +++T CNHSFH CI W + +CPVCR
Sbjct: 151 TDQ--CSICLTEFMDDDTIRLIST-CNHSFHTICIDLWFEGHKTCPVCR 196
>POMBASE|SPBC6B1.06c [details] [associations]
symbol:ubp14 "ubiquitin C-terminal hydrolase Ubp14"
species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 PomBase:SPBC6B1.06c GO:GO:0005654 GO:GO:0043161
GO:GO:0046872 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
GO:GO:0008270 GenomeReviews:CU329671_GR InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083
SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 EMBL:D83659 KO:K11836 eggNOG:COG5207
HOGENOM:HOG000162311 OMA:DDMVEDP PIR:T40647 RefSeq:NP_596085.1
ProteinModelPortal:Q11119 STRING:Q11119 MEROPS:C19.A65
EnsemblFungi:SPBC6B1.06c.1 GeneID:2541157 KEGG:spo:SPBC6B1.06c
OrthoDB:EOG470XRN NextBio:20802270 Uniprot:Q11119
Length = 775
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 42/140 (30%), Positives = 65/140 (46%)
Query: 95 PSCPVCLERLD-QDT--SGILTTICN--HSFHCSCISKWTDSSCPVCRYCQQQPEK---- 145
P C VC LD QD S L + N + + S ++ W ++ C + PE
Sbjct: 108 PKCLVCNIILDIQDPLLSLSLEAMKNATKASNKSQLTAW-ENELTTCDHIINLPENETYV 166
Query: 146 -----SICFVCQTSENLWMCVICGFVGCGR--YKGG----HAIIHWKETEHCYSLELETQ 194
+ C C +ENLWMC+ CG + CGR Y GG HA+ H+ +T H +++L++
Sbjct: 167 TNLDNATCSKCDLAENLWMCLTCGALSCGRKQYGGGGGNGHALSHYDDTGHPLAVKLKSI 226
Query: 195 RVWDYAGDNYVHRLIQSKTD 214
D D Y + + + D
Sbjct: 227 SP-DGQADIYCYSCDEERID 245
>UNIPROTKB|H0YL81 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC118274
EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3 Ensembl:ENST00000559771
Bgee:H0YL81 Uniprot:H0YL81
Length = 126
Score = 97 (39.2 bits), Expect = 0.00030, P = 0.00030
Identities = 14/35 (40%), Positives = 25/35 (71%)
Query: 150 VCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETE 184
VC+++++ W+C+ C V CGRY GHA H+++ +
Sbjct: 9 VCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQ 43
>UNIPROTKB|H0YMP6 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC118274
EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3 Ensembl:ENST00000561442
Bgee:H0YMP6 Uniprot:H0YMP6
Length = 132
Score = 97 (39.2 bits), Expect = 0.00030, P = 0.00030
Identities = 14/35 (40%), Positives = 25/35 (71%)
Query: 150 VCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETE 184
VC+++++ W+C+ C V CGRY GHA H+++ +
Sbjct: 62 VCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQ 96
>TAIR|locus:2177881 [details] [associations]
symbol:AT5G41350 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006914 "autophagy" evidence=RCA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005739 EMBL:CP002688 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 ProtClustDB:CLSN2697998
EMBL:AY048293 EMBL:AY143828 IPI:IPI00528415 RefSeq:NP_568590.1
UniGene:At.6481 ProteinModelPortal:Q94AB7 SMR:Q94AB7 IntAct:Q94AB7
PRIDE:Q94AB7 EnsemblPlants:AT5G41350.1 GeneID:834137
KEGG:ath:AT5G41350 TAIR:At5g41350 eggNOG:NOG314203
InParanoid:Q94AB7 OMA:AYYYYPR PhylomeDB:Q94AB7
Genevestigator:Q94AB7 Uniprot:Q94AB7
Length = 212
Score = 113 (44.8 bits), Expect = 0.00033, P = 0.00033
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDSS--CPVC 136
E+ CP+CLE D + ++ C+H FH +CI +W + S CPVC
Sbjct: 157 EEEDCPICLEEYDIENPKLVAK-CDHHFHLACILEWMERSETCPVC 201
>TAIR|locus:2076542 [details] [associations]
symbol:AT3G02290 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC009755 EMBL:AK221581 EMBL:BT024610 EMBL:AY085549
IPI:IPI00535295 IPI:IPI00846182 RefSeq:NP_566169.1
RefSeq:NP_974210.2 UniGene:At.41159 ProteinModelPortal:Q8LE94
SMR:Q8LE94 EnsemblPlants:AT3G02290.1 GeneID:821179
KEGG:ath:AT3G02290 TAIR:At3g02290 eggNOG:NOG311478
HOGENOM:HOG000005881 InParanoid:Q8LE94 OMA:RIYIREP PhylomeDB:Q8LE94
ProtClustDB:CLSN2917067 Genevestigator:Q8LE94 Uniprot:Q8LE94
Length = 231
Score = 114 (45.2 bits), Expect = 0.00033, P = 0.00033
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 91 STEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDSS--CPVC 136
S ++ CP CLE + I+T C+H FH SCI +W + S CPVC
Sbjct: 175 SEDEDVCPTCLEEYTSENPKIVTK-CSHHFHLSCIYEWMERSENCPVC 221
>UNIPROTKB|J9NW59 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
EMBL:AAEX03004889 Ensembl:ENSCAFT00000045024 Uniprot:J9NW59
Length = 912
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 142 QPEKSICFVCQT-SENLWMCVI--CGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWD 198
Q C C+ NLW C+ C +VGCG + H+ IH +ET+H ++ L T RVW
Sbjct: 24 QKSHGTCQDCKVRGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWC 83
Query: 199 YA 200
YA
Sbjct: 84 YA 85
>UNIPROTKB|E1BWB2 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008277
"regulation of G-protein coupled receptor protein signaling
pathway" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0044297 "cell body" evidence=IEA] [GO:0070536 "protein
K63-linked deubiquitination" evidence=IEA] [GO:0071108 "protein
K48-linked deubiquitination" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
SMART:SM00695 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0044297
GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11848 CTD:23032
EMBL:AADN02012750 IPI:IPI00598742 RefSeq:XP_422389.2
UniGene:Gga.26668 ProteinModelPortal:E1BWB2
Ensembl:ENSGALT00000014598 GeneID:424553 KEGG:gga:424553
NextBio:20826873 Uniprot:E1BWB2
Length = 910
Score = 124 (48.7 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 142 QPEKSICFVCQT-SENLWMCVI--CGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWD 198
Q C C+ NLW C+ C +VGCG H+ H +ET+HC ++ L T RVW
Sbjct: 24 QKSHGSCQDCKVRGPNLWACLENRCTYVGCGETHVDHSTTHSQETKHCLTVNLTTLRVWC 83
Query: 199 YA 200
YA
Sbjct: 84 YA 85
Score = 44 (20.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 14/63 (22%), Positives = 30/63 (47%)
Query: 229 DNCGSCDCVDS-GTSDALLSSKVEAIV----NEYNELLAAQLENQKIYYETLLQ-EAKEE 282
++CG+CD +++ +L E + +E N + + + +KI L + + E+
Sbjct: 288 ESCGTCDKIENDAVFKPVLEDPAETTMLIQDDENNSITSKDWQKEKISSNKLNRANSMED 347
Query: 283 TEK 285
EK
Sbjct: 348 LEK 350
>UNIPROTKB|Q8TEY7 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
species:9606 "Homo sapiens" [GO:0006897 "endocytosis" evidence=IEA]
[GO:0044297 "cell body" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0030891 "VCB complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=TAS] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0008277 "regulation of G-protein coupled receptor
protein signaling pathway" evidence=IMP] [GO:0070536 "protein
K63-linked deubiquitination" evidence=IDA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IDA] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0001664 "G-protein coupled receptor
binding" evidence=IPI] [GO:0071108 "protein K48-linked
deubiquitination" evidence=IDA] [GO:0016477 "cell migration"
evidence=ISS] [GO:0007411 "axon guidance" evidence=ISS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 EMBL:AF383172 GO:GO:0048471
GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
GO:GO:0044297 GO:GO:0004843 GO:GO:0004221 GO:GO:0030891
eggNOG:COG5560 HOGENOM:HOG000286031 HOVERGEN:HBG054196 KO:K11848
MEROPS:C19.037 CTD:23032 OMA:TMEEDKS EMBL:AF383173 EMBL:AB029020
EMBL:AK022864 EMBL:BC016663 IPI:IPI00236901 IPI:IPI00377264
IPI:IPI00402757 RefSeq:NP_055832.3 RefSeq:NP_963918.1
RefSeq:NP_963920.1 UniGene:Hs.480597 PDB:2UZG PDBsum:2UZG
ProteinModelPortal:Q8TEY7 SMR:Q8TEY7 DIP:DIP-48942N IntAct:Q8TEY7
MINT:MINT-1370210 STRING:Q8TEY7 PhosphoSite:Q8TEY7 DMDM:116242838
PaxDb:Q8TEY7 PRIDE:Q8TEY7 DNASU:23032 Ensembl:ENST00000357428
Ensembl:ENST00000370792 Ensembl:ENST00000370793
Ensembl:ENST00000370794 GeneID:23032 KEGG:hsa:23032 UCSC:uc001dhs.3
UCSC:uc001dhw.3 GeneCards:GC01M078161 H-InvDB:HIX0159957
HGNC:HGNC:20059 HPA:HPA005719 neXtProt:NX_Q8TEY7
PharmGKB:PA134955343 InParanoid:Q8TEY7 PhylomeDB:Q8TEY7
ChiTaRS:USP33 EvolutionaryTrace:Q8TEY7 GenomeRNAi:23032
NextBio:44018 ArrayExpress:Q8TEY7 Bgee:Q8TEY7 CleanEx:HS_USP33
Genevestigator:Q8TEY7 GermOnline:ENSG00000077254 Uniprot:Q8TEY7
Length = 942
Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 144 EKSI--CFVCQTS-ENLWMCVI--CGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWD 198
+KS+ C C+ NLW C+ C +VGCG + H+ IH +ET+H ++ L T RVW
Sbjct: 55 QKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWC 114
Query: 199 YA 200
YA
Sbjct: 115 YA 116
>UNIPROTKB|F1P6Y2 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0071108 "protein
K48-linked deubiquitination" evidence=IEA] [GO:0070536 "protein
K63-linked deubiquitination" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0008277 "regulation of G-protein coupled receptor protein
signaling pathway" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0007411
GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
GeneTree:ENSGT00690000101718 OMA:TMEEDKS EMBL:AAEX03004889
Ensembl:ENSCAFT00000032445 Uniprot:F1P6Y2
Length = 947
Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 142 QPEKSICFVCQT-SENLWMCVI--CGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWD 198
Q C C+ NLW C+ C +VGCG + H+ IH +ET+H ++ L T RVW
Sbjct: 55 QKSHGTCQDCKVRGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWC 114
Query: 199 YA 200
YA
Sbjct: 115 YA 116
>TAIR|locus:2097890 [details] [associations]
symbol:AT3G48030 "AT3G48030" species:3702 "Arabidopsis
thaliana" [GO:0001666 "response to hypoxia" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Pfam:PF04588 Prosite:PS00518
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL049658 EMBL:AB099346 EMBL:BT008566 EMBL:BT008679
IPI:IPI00518659 IPI:IPI00656859 IPI:IPI00656975 PIR:T06680
RefSeq:NP_190386.1 UniGene:At.35746 ProteinModelPortal:Q7X843
SMR:Q7X843 PaxDb:Q7X843 PRIDE:Q7X843 EnsemblPlants:AT3G48030.1
GeneID:823958 KEGG:ath:AT3G48030 TAIR:At3g48030 eggNOG:NOG250531
HOGENOM:HOG000034172 InParanoid:Q7X843 OMA:RFKSTNE PhylomeDB:Q7X843
ProtClustDB:CLSN2913369 Genevestigator:Q7X843 GermOnline:AT3G48030
InterPro:IPR007667 PROSITE:PS51503 Uniprot:Q7X843
Length = 349
Score = 117 (46.2 bits), Expect = 0.00039, P = 0.00039
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 91 STEQP-SCPVCLERLDQDTSGI-LTTICNHSFHCSCISKW--TDSSCPVCRYCQQQPEKS 146
S EQP C VCL DT + L +C+H+FH CI W ++S+CP+CR + +
Sbjct: 200 SLEQPFDCAVCLNEFS-DTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCR--RSLSTSN 256
Query: 147 ICF 149
+C+
Sbjct: 257 VCY 259
>TAIR|locus:2143251 [details] [associations]
symbol:AT5G15790 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL391144
HOGENOM:HOG000005881 UniGene:At.10163 UniGene:At.49025
EMBL:AY140056 EMBL:BT006270 EMBL:AK229146 IPI:IPI00521018
PIR:T51408 RefSeq:NP_197083.1 RefSeq:NP_974785.1
ProteinModelPortal:Q9LFU7 SMR:Q9LFU7 IntAct:Q9LFU7
EnsemblPlants:AT5G15790.1 EnsemblPlants:AT5G15790.2 GeneID:831435
KEGG:ath:AT5G15790 TAIR:At5g15790 eggNOG:NOG273668
InParanoid:Q9LFU7 OMA:SHSHEEA PhylomeDB:Q9LFU7
ProtClustDB:CLSN2687490 Genevestigator:Q9LFU7 Uniprot:Q9LFU7
Length = 232
Score = 113 (44.8 bits), Expect = 0.00044, P = 0.00044
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 90 SSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDSS--CPVC 136
+S ++ CP CLE + I+T C+H FH SCI +W + S CPVC
Sbjct: 175 TSDDEDVCPTCLEEYISENPKIVTK-CSHHFHLSCIYEWMERSENCPVC 222
>UNIPROTKB|A6QNM7 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
species:9913 "Bos taurus" [GO:0016477 "cell migration"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=ISS]
[GO:0008277 "regulation of G-protein coupled receptor protein
signaling pathway" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=ISS] [GO:0071108 "protein K48-linked
deubiquitination" evidence=ISS] [GO:0007411 "axon guidance"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0044297 "cell body" evidence=IEA] [GO:0001664
"G-protein coupled receptor binding" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
SMART:SM00695 GO:GO:0048471 GO:GO:0007411 GO:GO:0016477
GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
eggNOG:COG5560 GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
HOVERGEN:HBG054196 KO:K11848 EMBL:BC148905 IPI:IPI00708909
RefSeq:NP_001094609.1 UniGene:Bt.46098 ProteinModelPortal:A6QNM7
SMR:A6QNM7 STRING:A6QNM7 MEROPS:C19.037 Ensembl:ENSBTAT00000027667
GeneID:531706 KEGG:bta:531706 CTD:23032 InParanoid:A6QNM7
OMA:TMEEDKS OrthoDB:EOG4B8JC9 NextBio:20875513 Uniprot:A6QNM7
Length = 912
Score = 122 (48.0 bits), Expect = 0.00044, P = 0.00044
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 142 QPEKSICFVCQT-SENLWMCVI--CGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWD 198
Q C C+ NLW C+ C +VGCG + H+ IH +ET+H ++ L T RVW
Sbjct: 24 QKSHGSCQDCKVRGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWC 83
Query: 199 YA 200
YA
Sbjct: 84 YA 85
>TAIR|locus:2081740 [details] [associations]
symbol:ATL5 "AtL5" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006461 "protein complex assembly"
evidence=TAS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 EMBL:AL162651 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000034169 EMBL:AF132015 EMBL:BT009649
IPI:IPI00522876 PIR:T48058 RefSeq:NP_191828.1 UniGene:At.4826
ProteinModelPortal:Q9LZJ6 SMR:Q9LZJ6 EnsemblPlants:AT3G62690.1
GeneID:825443 KEGG:ath:AT3G62690 GeneFarm:4973 TAIR:At3g62690
eggNOG:NOG304339 InParanoid:Q9LZJ6 OMA:PMEACER
ProtClustDB:CLSN2683616 Genevestigator:Q9LZJ6 GermOnline:AT3G62690
Uniprot:Q9LZJ6
Length = 257
Score = 114 (45.2 bits), Expect = 0.00045, P = 0.00045
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 93 EQP--SCPVCLERLDQDTSGILTTICNHSFHCSCISKW--TDSSCPVCRYCQQQPEKSI 147
E P C VCL ++D G + C H FH CI W + SSCP+CR QP + +
Sbjct: 107 ESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCR-APVQPAQPV 164
>UNIPROTKB|I3L7M6 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
deubiquitination" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0008277 "regulation of G-protein coupled receptor protein
signaling pathway" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0007411
GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
GeneTree:ENSGT00690000101718 OMA:TMEEDKS EMBL:CU915644
Ensembl:ENSSSCT00000026836 Uniprot:I3L7M6
Length = 901
Score = 123 (48.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 142 QPEKSICFVCQT-SENLWMCVI--CGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWD 198
Q C C+ NLW C+ C +VGCG + H+ IH +ET+H ++ L T RVW
Sbjct: 24 QKSHGCCQDCKVRGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWC 83
Query: 199 YA 200
YA
Sbjct: 84 YA 85
Score = 44 (20.5 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 274 TLLQEAKEETEKIISEAVKKAIAQKLQKM--QAKLDRCVREKKFLDDLNENL-LKNQEMW 330
T+L + E +I+ + K+ + K+ K+ + +LD K D ++E + L +QE
Sbjct: 315 TMLIQDDENNSEILKDWQKEKMCNKINKVNSEGELD------KDRDSVSETVDLNSQETV 368
Query: 331 KAKI 334
K +I
Sbjct: 369 KVQI 372
>UNIPROTKB|F1P646 [details] [associations]
symbol:TRIM39 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104307
OMA:KESNRCE EMBL:AAEX03008197 ProteinModelPortal:F1P646
Ensembl:ENSCAFT00000000617 Uniprot:F1P646
Length = 488
Score = 86 (35.3 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 94 QPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW-----TDSSCPVCR----YCQQQPE 144
+ SC VCLE L + I+ C H+F +CI++W D CPVCR Y +P
Sbjct: 26 EASCSVCLEYLKEPV--IIE--CGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPN 81
Query: 145 KSICFVCQTSENL 157
+ + + + ++ L
Sbjct: 82 RQLGSMVEIAKQL 94
Score = 77 (32.2 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 31/125 (24%), Positives = 56/125 (44%)
Query: 252 AIVNEYNELLAAQLENQKIYYETLLQEAKEETEKIISEAVK-KAIAQKLQKMQAKLDRCV 310
AI + + L++ Y+ LQ+ E E+ + E + K+ +K +L C
Sbjct: 130 AISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVECR 189
Query: 311 REK--KFLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQLRDLMAYLEA 368
R++ K ++L+ L + Q+M +++ E E+ LR + D L L A +E
Sbjct: 190 RQQILKEFEELHRRLDEEQQMLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEG 249
Query: 369 EKTLQ 373
K LQ
Sbjct: 250 -KCLQ 253
>UNIPROTKB|C9JIU5 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00884241 ProteinModelPortal:C9JIU5 SMR:C9JIU5 STRING:C9JIU5
Ensembl:ENST00000414641 ArrayExpress:C9JIU5 Bgee:C9JIU5
Uniprot:C9JIU5
Length = 227
Score = 74 (31.1 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCIS---KWT------DSSCPVCR 137
++ +CP+CLE L + L+ C HSF +CI+ K + +SSCPVC+
Sbjct: 11 KEVTCPICLELLTEP----LSLDCGHSFCQACITAKIKESVIISRGESSCPVCQ 60
Score = 73 (30.8 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 30/108 (27%), Positives = 54/108 (50%)
Query: 275 LLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKI 334
L QE + I+E VK+ +K+Q L R ++E + + L +++ + + WK I
Sbjct: 121 LSQEHQGHQTFRINEVVKEC----QEKLQVALQRLIKEDQEAEKLEDDIRQERTAWKNYI 176
Query: 335 SEIEEREKMALRAKDDK-IQDSEAQLRDLMAYLEAE-KTLQQLSISNE 380
+IE R+K+ + + I D+E Q R+L E E L L+ + +
Sbjct: 177 -QIE-RQKILKGFNEMRVILDNEEQ-RELQKLEEGEVNVLDNLAAATD 221
Score = 41 (19.5 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 138 YCQQQPEKSICFVCQTSE 155
+C++ K IC+VC+ S+
Sbjct: 107 FCKEDG-KVICWVCELSQ 123
>TAIR|locus:2064905 [details] [associations]
symbol:AT2G39100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 UniGene:At.37212
InterPro:IPR017907 HSSP:P28990 eggNOG:NOG244178 EMBL:AY065197
EMBL:AY081521 IPI:IPI00536162 RefSeq:NP_850310.1 UniGene:At.20141
ProteinModelPortal:Q8VZ73 SMR:Q8VZ73 IntAct:Q8VZ73 PaxDb:Q8VZ73
PRIDE:Q8VZ73 EnsemblPlants:AT2G39100.1 GeneID:818496
KEGG:ath:AT2G39100 TAIR:At2g39100 HOGENOM:HOG000093087
InParanoid:Q8VZ73 OMA:FWHELRC PhylomeDB:Q8VZ73
ProtClustDB:CLSN2680124 Genevestigator:Q8VZ73 Uniprot:Q8VZ73
Length = 296
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 96 SCPVCLERLDQDTSGILTTICNHSFHCSCISKWTD--SSCPVC 136
SCP+CLE L + S + T+C H + +CI KW+ +CP+C
Sbjct: 38 SCPICLENLTERRSAAVITVCKHGYCLACIRKWSSFKRNCPLC 80
>TAIR|locus:2181032 [details] [associations]
symbol:DAFL2 "DAF-Like gene 2" species:3702 "Arabidopsis
thaliana" [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000237642 EMBL:AL162351 EMBL:BT010682 EMBL:BT010973
IPI:IPI00526186 PIR:T48209 RefSeq:NP_195808.1 UniGene:At.33488
UniGene:At.70718 ProteinModelPortal:Q9LZV8 SMR:Q9LZV8
EnsemblPlants:AT5G01880.1 GeneID:831691 KEGG:ath:AT5G01880
TAIR:At5g01880 InParanoid:Q9LZV8 OMA:ATECAIC PhylomeDB:Q9LZV8
ProtClustDB:CLSN2916663 Genevestigator:Q9LZV8 GermOnline:AT5G01880
Uniprot:Q9LZV8
Length = 159
Score = 106 (42.4 bits), Expect = 0.00049, P = 0.00049
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 97 CPVCL-ERLDQDTSGILTTICNHSFHCSCISKW--TDSSCPVCRY 138
C +CL E D + +L CNHSFH SCI W + SSCP CR+
Sbjct: 105 CAICLGEFADGERVRVLPP-CNHSFHMSCIDTWLVSHSSCPNCRH 148
>UNIPROTKB|I3L7L2 [details] [associations]
symbol:LOC100514278 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 EMBL:CU466452
Ensembl:ENSSSCT00000026253 Uniprot:I3L7L2
Length = 180
Score = 109 (43.4 bits), Expect = 0.00049, P = 0.00049
Identities = 34/124 (27%), Positives = 48/124 (38%)
Query: 26 DGMDDQYSVLIRFDSQDSADKFYQHFNGRQFNSLEEEVCHV-LFTVDVQFTGYTGSLEHV 84
DG D V D Y R ++E + H+ VDV+ S E +
Sbjct: 26 DGFADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESI 85
Query: 85 QPAPASST--------EQPSCPVCLERLDQDTSGILTTI-CNHSFHCSCISKWTDSS--C 133
P + ++ CP+C +D I T + C+H FH C+S W S C
Sbjct: 86 DGLPETLVLEDHTAIGQEQCCPICCSEYIKDD--IATELPCHHFFHKPCVSIWLQKSGTC 143
Query: 134 PVCR 137
PVCR
Sbjct: 144 PVCR 147
>ZFIN|ZDB-GENE-030616-560 [details] [associations]
symbol:si:dkey-51a16.9 "si:dkey-51a16.9"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-030616-560 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
EMBL:BX530079 IPI:IPI00882963 Ensembl:ENSDART00000057687
ArrayExpress:F1Q9J1 Bgee:F1Q9J1 Uniprot:F1Q9J1
Length = 155
Score = 105 (42.0 bits), Expect = 0.00050, P = 0.00050
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 96 SCPVCLERL-DQDTSGILTTICNHSFHCSCISKWTD--SSCPVCR--YCQQQPE 144
+C VCLE +D G+ C+H+FH C+ KW + S CP+C C+ QP+
Sbjct: 90 TCAVCLEEFRSRDELGVCP--CSHAFHKKCLVKWLEIRSVCPMCNKPICRLQPD 141
>TAIR|locus:2193874 [details] [associations]
symbol:AT1G55530 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC005223
eggNOG:NOG235630 HOGENOM:HOG000237766 EMBL:AY039608 EMBL:AF424578
EMBL:BT000502 IPI:IPI00534528 PIR:F96597 RefSeq:NP_564693.1
UniGene:At.19898 ProteinModelPortal:Q9ZVU8 SMR:Q9ZVU8 STRING:Q9ZVU8
PRIDE:Q9ZVU8 EnsemblPlants:AT1G55530.1 GeneID:842000
KEGG:ath:AT1G55530 TAIR:At1g55530 InParanoid:Q9ZVU8 OMA:FVEEMED
PhylomeDB:Q9ZVU8 ProtClustDB:CLSN2917296 Genevestigator:Q9ZVU8
Uniprot:Q9ZVU8
Length = 351
Score = 116 (45.9 bits), Expect = 0.00051, P = 0.00051
Identities = 26/66 (39%), Positives = 31/66 (46%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTD--SSCPVCRYCQQQPEKSICFV 150
E C VCL+ + T L C H FH C+ W + SSCPVCRY E V
Sbjct: 219 ETLQCSVCLDDFEIGTEAKLMP-CTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSV 277
Query: 151 CQTSEN 156
TS+N
Sbjct: 278 TTTSDN 283
>TAIR|locus:2055435 [details] [associations]
symbol:AT2G34000 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC002341
EMBL:DQ059092 EMBL:BT029341 IPI:IPI00544559 PIR:B84751
RefSeq:NP_180947.1 UniGene:At.53025 ProteinModelPortal:O22953
SMR:O22953 PRIDE:O22953 EnsemblPlants:AT2G34000.1 GeneID:817961
KEGG:ath:AT2G34000 TAIR:At2g34000 eggNOG:NOG251402
HOGENOM:HOG000114083 InParanoid:O22953 OMA:WLESHAT PhylomeDB:O22953
ProtClustDB:CLSN2913116 Genevestigator:O22953 Uniprot:O22953
Length = 151
Score = 104 (41.7 bits), Expect = 0.00053, P = 0.00053
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 88 PASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDS--SCPVCR 137
P S+ ++ CPVCL + ++ + C H F CI KW +S +CPVCR
Sbjct: 82 PESNNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEECIGKWLESHATCPVCR 133
>FB|FBgn0035411 [details] [associations]
symbol:Girdin "Girdin" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] [GO:0045793 "positive regulation of
cell size" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] InterPro:IPR008636 Pfam:PF05622 GO:GO:0005737
GO:GO:0000226 EMBL:AE014296 GO:GO:0007015 GO:GO:0045793 HSSP:P03069
GeneTree:ENSGT00690000101702 UniGene:Dm.10802 GeneID:38385
KEGG:dme:Dmel_CG12734 CTD:38385 FlyBase:FBgn0035411
GenomeRNAi:38385 NextBio:808356 RefSeq:NP_647780.1
ProteinModelPortal:Q9VZT7 SMR:Q9VZT7 IntAct:Q9VZT7 PRIDE:Q9VZT7
EnsemblMetazoa:FBtr0073035 UCSC:CG12734-RA InParanoid:Q9VZT7
OMA:NRRSWVD PhylomeDB:Q9VZT7 ArrayExpress:Q9VZT7 Bgee:Q9VZT7
Uniprot:Q9VZT7
Length = 1381
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 55/219 (25%), Positives = 104/219 (47%)
Query: 181 KETEHCYSLELET----QRVWDYAGDNYVHR-----LIQSKTDGKLVELNSHCLHGKDNC 231
K +EH SLE E Q++ D A + V R L++ + +LV N + D
Sbjct: 374 KRSEHAISLESEIIKYKQKINDMALERDVDRSKLEELLEENSQLQLVARNLNSTMDLDKS 433
Query: 232 GSCDCVDSGTSDALLSSKVEAIVNEYNELLAAQLENQKIY--YETLLQEA-KEETEKIIS 288
S + D + D LS ++ N L +LEN+++ E L + + E T K++
Sbjct: 434 FSENEDDCNSGDNSLSEQLTN--NAQTRALKLELENRRLTAALEQLKESSFHESTSKMLE 491
Query: 289 -EAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNENLLK-NQEMWKAKISEIEEREKMALR 346
E KK ++ K+++MQ ++R ++ L+ + +N L+ N+++ A + + ++ +L
Sbjct: 492 LEKEKKKLSLKIEQMQENINRLTQQNVELEGVFKNALEENKKLQDAVDNRQKSYDRQSLE 551
Query: 347 AKDD--KIQDSEAQLRDLMAYLEAEKTLQQLSISNEIKD 383
+ D K+ D+E + L + +TL + SI D
Sbjct: 552 READRQKLSDAEQHVETLNKEKQRIQTLNE-SIQRRADD 589
>ZFIN|ZDB-GENE-070705-379 [details] [associations]
symbol:btr27 "bloodthirsty-related gene family,
member 27" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070705-379 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
eggNOG:NOG252602 OrthoDB:EOG4BVRTF HOVERGEN:HBG106862 EMBL:CR853286
IPI:IPI00962937 Ensembl:ENSDART00000132370
GeneTree:ENSGT00660000095328 Uniprot:A5WUZ3
Length = 549
Score = 91 (37.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 77 YTGSLEHVQPAPASST----EQPSCPVCLERLDQDTSGILTTICNHSFHCSCISK-WTDS 131
+ GS + + P +SS+ E+ C +CLE S T C H+F SC++K W +S
Sbjct: 15 WRGSQDVLPPYMSSSSNPLSEELQCSICLEVFTDPVS----TPCGHNFCKSCLNKCWNNS 70
Query: 132 SCPVCRYCQQ 141
C YC++
Sbjct: 71 QTCSCPYCKE 80
Score = 72 (30.4 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 24/108 (22%), Positives = 59/108 (54%)
Query: 265 LENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNENLL 324
LE + +T L + +++ +++I + +KK K K++ +EK ++ +L+
Sbjct: 201 LEEESKEKKTELMKTQKDVQQMIQDRIKKIQDVKHSAGVRKINS-EKEKATHVEIFTDLI 259
Query: 325 KNQEMWKAKISEI-EEREKMALRAKDDKIQDSEAQLRDL-MAYLEAEK 370
+ E + ++ E+ EE++K A + +++ I++ E ++ +L M E E+
Sbjct: 260 RAIERCQTELLEMMEEQQKAAEKQEEELIEELEQEITELKMRNTELEQ 307
>TAIR|locus:2193992 [details] [associations]
symbol:ATL3 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:AC067754 EMBL:AF132013 EMBL:AC016529 EMBL:BT010140
IPI:IPI00529429 PIR:H96746 RefSeq:NP_177375.1 UniGene:At.11694
UniGene:At.71796 ProteinModelPortal:Q9XF63 SMR:Q9XF63
EnsemblPlants:AT1G72310.1 GeneID:843563 KEGG:ath:AT1G72310
GeneFarm:4970 TAIR:At1g72310 HOGENOM:HOG000034162 InParanoid:Q9XF63
OMA:YAKRYLG PhylomeDB:Q9XF63 ProtClustDB:CLSN2715378
Genevestigator:Q9XF63 GermOnline:AT1G72310 Uniprot:Q9XF63
Length = 324
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 97 CPVCLERLDQDTSGILTTICNHSFHCSCISKW--TDSSCPVCRYCQQQPEKS 146
C +CL L + L CNHSFH CI W + S+CP+CR PE++
Sbjct: 127 CSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQA 178
>TAIR|locus:2053776 [details] [associations]
symbol:AT2G42350 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005956
EMBL:BT010853 EMBL:BT011323 IPI:IPI00542284 PIR:H84852
RefSeq:NP_181764.1 UniGene:At.42716 ProteinModelPortal:Q9SLC4
SMR:Q9SLC4 EnsemblPlants:AT2G42350.1 GeneID:818836
KEGG:ath:AT2G42350 TAIR:At2g42350 eggNOG:NOG298426
HOGENOM:HOG000034168 InParanoid:Q9SLC4 OMA:VAGTECA PhylomeDB:Q9SLC4
ProtClustDB:CLSN2683918 Genevestigator:Q9SLC4 GermOnline:AT2G42350
Uniprot:Q9SLC4
Length = 217
Score = 111 (44.1 bits), Expect = 0.00061, P = 0.00061
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 97 CPVCLERLDQDTSGILTTICNHSFHCSCISKW--TDSSCPVCR 137
C VCL L++ + + C H FH SC+ W T S+CPVCR
Sbjct: 100 CAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCR 142
>UNIPROTKB|A7Z056 [details] [associations]
symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
protein signaling pathway" evidence=ISS] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0071108 "protein
K48-linked deubiquitination" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0001664 "G-protein coupled
receptor binding" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560
EMBL:BC153254 IPI:IPI00700030 RefSeq:NP_001098803.1
UniGene:Bt.26746 ProteinModelPortal:A7Z056 SMR:A7Z056 STRING:A7Z056
PRIDE:A7Z056 Ensembl:ENSBTAT00000027070 GeneID:505839
KEGG:bta:505839 CTD:10868 GeneTree:ENSGT00690000101718
HOGENOM:HOG000286031 HOVERGEN:HBG054196 InParanoid:A7Z056 KO:K11848
OMA:ADYGQIS OrthoDB:EOG4D52WZ NextBio:20867329 ArrayExpress:A7Z056
Uniprot:A7Z056
Length = 912
Score = 119 (46.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 26/64 (40%), Positives = 34/64 (53%)
Query: 145 KSICFVCQTS-ENLWMC--VICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAG 201
KS C C S NLW C V C +VGCG H+ +H + +H ++ L T RVW YA
Sbjct: 27 KSTCQSCGVSGPNLWACLQVSCSYVGCGESFADHSTLHAQAKKHNLTVNLTTFRVWCYAC 86
Query: 202 DNYV 205
+ V
Sbjct: 87 EKEV 90
Score = 47 (21.6 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 254 VNEYNELLAAQLENQKIYYETLLQEAKEETEKIISEAVKK 293
V E +E + E ++Y +EA E ++++S A +
Sbjct: 662 VTEVHETVVQNAEAYVLFYRKSSEEAVRERQQVVSLAAMR 701
>ZFIN|ZDB-GENE-050208-484 [details] [associations]
symbol:usp49 "ubiquitin specific peptidase 49"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
ZFIN:ZDB-GENE-050208-484 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
eggNOG:COG5077 EMBL:AL645789 GeneTree:ENSGT00690000101718
HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK
CTD:25862 OMA:VRGQKQD EMBL:BC171546 EMBL:BC171548 IPI:IPI00503837
RefSeq:NP_001038361.1 UniGene:Dr.13979 Ensembl:ENSDART00000037069
GeneID:559473 KEGG:dre:559473 InParanoid:Q1MTK1 NextBio:20882985
Uniprot:Q1MTK1
Length = 649
Score = 124 (48.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 143 PEKSICFVCQTSENLWMCVICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAGD 202
P+ C C T+E++W C+ C V CGRY H+ H+++T+H ++++ V+ +A
Sbjct: 21 PQMWRCVDCDTTESVWACLKCTHVACGRYMEEHSRSHYQQTQHPLAMDVRELDVFCFACG 80
Query: 203 NYV 205
+YV
Sbjct: 81 DYV 83
Score = 38 (18.4 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 295 IAQKLQKMQAKLDRCVREKKFLDDLNENLLKNQ 327
+ + L K+Q +L+ K FL + + L Q
Sbjct: 396 LCELLDKVQQELESDAPRKHFLIPITQRKLSKQ 428
>UNIPROTKB|F1N2B1 [details] [associations]
symbol:USP16 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0070537 "histone H2A K63-linked
deubiquitination" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0045901 "positive regulation
of translational elongation" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0005634
GO:GO:0045893 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004197 GO:GO:0016578 GO:GO:0004843
GO:GO:0004221 IPI:IPI00706867 UniGene:Bt.51616
GeneTree:ENSGT00690000102047 OMA:CKNVAEE EMBL:DAAA02000173
EMBL:DAAA02000172 Ensembl:ENSBTAT00000026801 Uniprot:F1N2B1
Length = 826
Score = 118 (46.6 bits), Expect = 0.00064, Sum P(2) = 0.00063
Identities = 35/123 (28%), Positives = 56/123 (45%)
Query: 107 DTSGILTTICNH---SFHCSCISK-WTDSSCPVCRYCQQQPEKSICFVCQTSEN--LWMC 160
D+S L +C H + K + +C+ C+ + +T EN +W+C
Sbjct: 15 DSSESLEPVCRHIRKGLEQGNLKKALVNVEWNICQDCKTDNKVKDKSEEETEENPSVWLC 74
Query: 161 VICGFVGCGRY-KGGHAIIHW---KETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGK 216
+ CG GCGR + HA+ H+ + HC L L+ VW Y D+ VH S G+
Sbjct: 75 LKCGHQGCGRNSQEQHALKHYMKPRSEPHCLVLSLDNWSVWCYLCDDEVH-YCNSNRLGQ 133
Query: 217 LVE 219
+V+
Sbjct: 134 VVD 136
Score = 47 (21.6 bits), Expect = 0.00064, Sum P(2) = 0.00063
Identities = 13/41 (31%), Positives = 26/41 (63%)
Query: 320 NENL-LKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQL 359
N N+ L+N+++ K +E +EREK A+++ +S +Q+
Sbjct: 153 NGNIELENKKLEKESKNE-QEREKKENMARENPSMNSTSQI 192
Score = 44 (20.5 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 342 KMALRAKDDKIQDSEAQLRDLMAYLEAEK 370
K A+R K + QDS+ LR L+ + AE+
Sbjct: 286 KKAVRFKGYQQQDSQELLRYLLDGMRAEE 314
Score = 41 (19.5 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 264 QLENQKIYYETLLQEAKEETEKIISE 289
+LEN+K+ E+ ++ +E+ E + E
Sbjct: 157 ELENKKLEKESKNEQEREKKENMARE 182
>UNIPROTKB|Q08DA3 [details] [associations]
symbol:USP16 "Ubiquitin carboxyl-terminal hydrolase 16"
species:9913 "Bos taurus" [GO:0051289 "protein homotetramerization"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISS] [GO:0016578 "histone deubiquitination" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0043130 "ubiquitin binding"
evidence=ISS] [GO:0007067 "mitosis" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=ISS] [GO:0051301 "cell division"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0005634
GO:GO:0045893 GO:GO:0051301 GO:GO:0007067 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0003713 GO:GO:0051289
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0042393
GO:GO:0043130 GO:GO:0004197 GO:GO:0016578 GO:GO:0004843
GO:GO:0004221 eggNOG:COG5207 EMBL:BC123861 IPI:IPI00706867
RefSeq:NP_001070335.1 UniGene:Bt.51616 ProteinModelPortal:Q08DA3
SMR:Q08DA3 MEROPS:C19.021 PRIDE:Q08DA3 GeneID:519992
KEGG:bta:519992 CTD:10600 HOGENOM:HOG000154755 HOVERGEN:HBG062704
InParanoid:Q08DA3 KO:K11844 OrthoDB:EOG495ZRD NextBio:20872996
Uniprot:Q08DA3
Length = 826
Score = 118 (46.6 bits), Expect = 0.00064, Sum P(2) = 0.00063
Identities = 35/123 (28%), Positives = 56/123 (45%)
Query: 107 DTSGILTTICNH---SFHCSCISK-WTDSSCPVCRYCQQQPEKSICFVCQTSEN--LWMC 160
D+S L +C H + K + +C+ C+ + +T EN +W+C
Sbjct: 15 DSSESLEPVCRHIRKGLEQGNLKKALVNVEWNICQDCKTDNKVKDKSEEETEENPSVWLC 74
Query: 161 VICGFVGCGRY-KGGHAIIHW---KETEHCYSLELETQRVWDYAGDNYVHRLIQSKTDGK 216
+ CG GCGR + HA+ H+ + HC L L+ VW Y D+ VH S G+
Sbjct: 75 LKCGHQGCGRNSQEQHALKHYMKPRSEPHCLVLSLDNWSVWCYLCDDEVH-YCNSNRLGQ 133
Query: 217 LVE 219
+V+
Sbjct: 134 VVD 136
Score = 47 (21.6 bits), Expect = 0.00064, Sum P(2) = 0.00063
Identities = 13/41 (31%), Positives = 26/41 (63%)
Query: 320 NENL-LKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQL 359
N N+ L+N+++ K +E +EREK A+++ +S +Q+
Sbjct: 153 NGNIELENKKLEKESKNE-QEREKKENMARENPSMNSTSQI 192
Score = 44 (20.5 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 342 KMALRAKDDKIQDSEAQLRDLMAYLEAEK 370
K A+R K + QDS+ LR L+ + AE+
Sbjct: 286 KKAVRFKGYQQQDSQELLRYLLDGMRAEE 314
Score = 41 (19.5 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 264 QLENQKIYYETLLQEAKEETEKIISE 289
+LEN+K+ E+ ++ +E+ E + E
Sbjct: 157 ELENKKLEKESKNEQEREKKENMARE 182
>UNIPROTKB|Q3T0W3 [details] [associations]
symbol:RNF181 "E3 ubiquitin-protein ligase RNF181"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 EMBL:BC102230 IPI:IPI00699256
RefSeq:NP_001029682.1 UniGene:Bt.44205 ProteinModelPortal:Q3T0W3
Ensembl:ENSBTAT00000024336 GeneID:515743 KEGG:bta:515743 CTD:51255
eggNOG:NOG294567 HOGENOM:HOG000031081 HOVERGEN:HBG108412
InParanoid:Q3T0W3 OMA:EEQYRQN OrthoDB:EOG40VVQW NextBio:20871984
Uniprot:Q3T0W3
Length = 153
Score = 104 (41.7 bits), Expect = 0.00064, P = 0.00064
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 91 STEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTD--SSCPVCRY 138
S + CPVCL +++ + I C+H FH +CI W +SCP+CR+
Sbjct: 70 SQAELKCPVCLLEFEEEETAIEMP-CHHLFHSNCILPWLSKTNSCPLCRH 118
>TAIR|locus:1006230202 [details] [associations]
symbol:AT3G51325 "AT3G51325" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL132980
EMBL:BT024629 EMBL:AK229345 IPI:IPI00523157 RefSeq:NP_974410.1
UniGene:At.47960 ProteinModelPortal:Q3E7K1 SMR:Q3E7K1
EnsemblPlants:AT3G51325.1 GeneID:2745959 KEGG:ath:AT3G51325
TAIR:At3g51325 eggNOG:NOG267143 InParanoid:Q3E7K1 OMA:GREEECC
PhylomeDB:Q3E7K1 ProtClustDB:CLSN2915205 Genevestigator:Q3E7K1
Uniprot:Q3E7K1
Length = 90
Score = 94 (38.1 bits), Expect = 0.00064, P = 0.00064
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 93 EQPSCPVCLERLDQDTSGILTTI-CNHSFHCSCISKWTDSS----CPVCRY 138
E+ C VCL R++ ++ ++ C+H FH C+ W + S CP+CR+
Sbjct: 22 EEECCSVCLMRME--AKDVIKSLPCSHEFHSLCVDTWFNVSRKICCPLCRF 70
>UNIPROTKB|G4MXB0 [details] [associations]
symbol:MGG_08270 "Ubiquitin carboxyl-terminal hydrolase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000449
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR009060
InterPro:IPR016652 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627
Pfam:PF02148 PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
EMBL:CM001232 SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004221 KO:K11836
RefSeq:XP_003715815.1 ProteinModelPortal:G4MXB0
EnsemblFungi:MGG_08270T0 GeneID:2678560 KEGG:mgr:MGG_08270
Uniprot:G4MXB0
Length = 787
Score = 109 (43.4 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 144 EKSICFVCQTSENLWMCVICGFVGCGRYK-GG-----HAIIHWKETEHCYSLELETQRVW 197
E C C +ENLW+C+ CG +GCGR + GG HA+ H E+ H +++L +
Sbjct: 170 ELGTCSKCDLNENLWLCLQCGALGCGRAQFGGVSGHSHALAHATESGHGVAVKLGSITP- 228
Query: 198 DYAGDNYVHRLIQSKTDGKL 217
+ D Y + + + D L
Sbjct: 229 EGTADVYCYSCDEERVDENL 248
Score = 56 (24.8 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 80 SLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISK 127
SL P PA S + C C + +D G+ +C F+ C+ +
Sbjct: 8 SLSLQPPTPAQSVYREDCTQCFDSID-GPDGL--DVCLQCFNGGCVGE 52
>UNIPROTKB|F1PD56 [details] [associations]
symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0071108 "protein
K48-linked deubiquitination" evidence=IEA] [GO:0070536 "protein
K63-linked deubiquitination" evidence=IEA] [GO:0008277 "regulation
of G-protein coupled receptor protein signaling pathway"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
GO:GO:0004221 CTD:10868 GeneTree:ENSGT00690000101718 KO:K11848
OMA:ADYGQIS EMBL:AAEX03006844 RefSeq:XP_537816.3
Ensembl:ENSCAFT00000031793 GeneID:480696 KEGG:cfa:480696
Uniprot:F1PD56
Length = 915
Score = 117 (46.2 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 26/64 (40%), Positives = 33/64 (51%)
Query: 145 KSICFVCQ-TSENLWMC--VICGFVGCGRYKGGHAIIHWKETEHCYSLELETQRVWDYAG 201
K C C T NLW C V C +VGCG H+ IH + +H ++ L T RVW YA
Sbjct: 27 KGACQSCGVTGPNLWACLQVACPYVGCGESFADHSTIHAQAKKHNLTVNLTTFRVWCYAC 86
Query: 202 DNYV 205
+ V
Sbjct: 87 EKEV 90
Score = 49 (22.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 254 VNEYNELLAAQLENQKIYYETLLQEAKEETEKIISEAVKK 293
V E +E + E ++Y +EA +E ++++S A +
Sbjct: 665 VTEVHETVVQSAEAYVLFYRKSSEEAVQERQQVVSLAAMR 704
>TAIR|locus:4515103413 [details] [associations]
symbol:ATL4H species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
EMBL:AL161547 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL021889 eggNOG:COG5540 HOGENOM:HOG000239376 IPI:IPI00537985
PIR:T05077 RefSeq:NP_001119003.1 UniGene:At.74353
ProteinModelPortal:P0C041 SMR:P0C041 EnsemblPlants:AT4G17905.1
GeneID:6241286 KEGG:ath:AT4G17905 TAIR:At4g17905 PhylomeDB:P0C041
Genevestigator:P0C041 Uniprot:P0C041
Length = 310
Score = 114 (45.2 bits), Expect = 0.00068, P = 0.00068
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 97 CPVCLERLDQDTSGILTTICNHSFHCSCISKW--TDSSCPVCRY-----CQQQPEKSI 147
C +CL ++D S L CNH+FH CI +W + S+CP+CR QQPE +
Sbjct: 155 CSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQQPEHHV 212
>UNIPROTKB|F1RXY2 [details] [associations]
symbol:USP45 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 KO:K11844 GeneTree:ENSGT00690000102047
CTD:85015 OMA:CEEKCET EMBL:CU041276 RefSeq:XP_001925615.1
Ensembl:ENSSSCT00000004808 GeneID:100152458 KEGG:ssc:100152458
Uniprot:F1RXY2
Length = 817
Score = 126 (49.4 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 36/151 (23%), Positives = 67/151 (44%)
Query: 89 ASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW-TDSSCPVCRYCQQQPEKSI 147
A +++P+ P + D G +H+ + + + + T++ VC C ++ S
Sbjct: 14 AKRSKRPTIPHDEDSSDDIAVGFTCQHVSHAINVNHVKRAITENLWSVCSECLKERRFSD 73
Query: 148 CFVCQTSENLWMCVICGFVGCGRY-KGGHAIIH---WKETEHCYSLELETQRVWDYAGDN 203
S+ +W+C+ CGF GCG+ + H++ H W+ HC + L T +W Y D
Sbjct: 74 GQPVLLSD-IWLCLKCGFQGCGKNSESQHSVKHFNSWRAELHCIIISLSTWIIWCYECDE 132
Query: 204 YVHRLIQSKTDGKLVE-LNSHCLHGKDNCGS 233
+ K ++V+ L H + N S
Sbjct: 133 KLSTHCNKKVLAQIVDFLQKHVSKTQTNAFS 163
Score = 38 (18.4 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 258 NELLAAQLENQKIYYETLLQEAKEETEKIISEAVKKAI 295
N+LL +K Y+ A+++ E + + A K+ +
Sbjct: 640 NKLLCEHCTEKKQKYQKETSSAEKKAEGVYTNARKQLL 677
>UNIPROTKB|F6UMQ8 [details] [associations]
symbol:USP16 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000102047
OMA:CKNVAEE Ensembl:ENSCAFT00000013702 EMBL:AAEX03016478
Uniprot:F6UMQ8
Length = 825
Score = 110 (43.8 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 135 VCRYCQQQPEKSICFVCQTSEN--LWMCVICGFVGCGR-YKGGHAIIHW---KETEHCYS 188
+C+ C+ + +T EN +W+C+ CG GCGR + HA+ H+ + HC
Sbjct: 47 ICQDCKTDNKVKDKSEEETEENPSVWLCLKCGHQGCGRDSQEQHALKHYMTPRSEPHCLV 106
Query: 189 LELETQRVWDYAGDNYVHRLIQSKTDGKLVE 219
L L+ VW Y D+ V + S G++V+
Sbjct: 107 LSLDNWSVWCYLCDDEV-QYCSSNRLGQVVD 136
Score = 55 (24.4 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 26/106 (24%), Positives = 45/106 (42%)
Query: 210 QSKTDGKLVELNSHCL--HGKDNCGSCDCVDSGTSDALLS--SKVEAIVNEYNELLAAQL 265
Q K GK++ LN C H +DN + G D + S+ E EY + L
Sbjct: 455 QQKIQGKVLHLNDICTIDHPEDNECEVEMSLQGEVDVKSNHISEEEITHKEYC-VNQKDL 513
Query: 266 ENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVR 311
Q+ E+++ K TE++ + V + L+ +++ C R
Sbjct: 514 NGQEKMIESVIDNQKS-TEEVDMDNVN--MDNDLEVLESSPTECTR 556
>UNIPROTKB|E2QS22 [details] [associations]
symbol:USP16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070537 "histone H2A K63-linked
deubiquitination" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0045901 "positive regulation
of translational elongation" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0005634
GO:GO:0045893 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004197 GO:GO:0016578 GO:GO:0004843
GO:GO:0004221 CTD:10600 KO:K11844 RefSeq:XP_848330.1
ProteinModelPortal:E2QS22 Ensembl:ENSCAFT00000013702 GeneID:478398
KEGG:cfa:478398 NextBio:20853737 Uniprot:E2QS22
Length = 826
Score = 110 (43.8 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 135 VCRYCQQQPEKSICFVCQTSEN--LWMCVICGFVGCGR-YKGGHAIIHW---KETEHCYS 188
+C+ C+ + +T EN +W+C+ CG GCGR + HA+ H+ + HC
Sbjct: 47 ICQDCKTDNKVKDKSEEETEENPSVWLCLKCGHQGCGRDSQEQHALKHYMTPRSEPHCLV 106
Query: 189 LELETQRVWDYAGDNYVHRLIQSKTDGKLVE 219
L L+ VW Y D+ V + S G++V+
Sbjct: 107 LSLDNWSVWCYLCDDEV-QYCSSNRLGQVVD 136
Score = 55 (24.4 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 26/106 (24%), Positives = 45/106 (42%)
Query: 210 QSKTDGKLVELNSHCL--HGKDNCGSCDCVDSGTSDALLS--SKVEAIVNEYNELLAAQL 265
Q K GK++ LN C H +DN + G D + S+ E EY + L
Sbjct: 456 QQKIQGKVLHLNDICTIDHPEDNECEVEMSLQGEVDVKSNHISEEEITHKEYC-VNQKDL 514
Query: 266 ENQKIYYETLLQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVR 311
Q+ E+++ K TE++ + V + L+ +++ C R
Sbjct: 515 NGQEKMIESVIDNQKS-TEEVDMDNVN--MDNDLEVLESSPTECTR 557
>TAIR|locus:2053863 [details] [associations]
symbol:RHA3A "RING-H2 finger A3A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC007584
HOGENOM:HOG000237642 EMBL:AF078824 EMBL:AF370239 EMBL:AY062961
IPI:IPI00548768 PIR:T51844 RefSeq:NP_179337.1 UniGene:At.25384
ProteinModelPortal:O22755 SMR:O22755 STRING:O22755
EnsemblPlants:AT2G17450.1 GeneID:816251 KEGG:ath:AT2G17450
GeneFarm:4094 TAIR:At2g17450 eggNOG:NOG257865 InParanoid:O22755
OMA:DSTECAI PhylomeDB:O22755 ProtClustDB:CLSN2683892
Genevestigator:O22755 GermOnline:AT2G17450 Uniprot:O22755
Length = 185
Score = 108 (43.1 bits), Expect = 0.00075, P = 0.00075
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 82 EHVQPAPASSTEQPSCPVCL-ERLDQDTSGILTTICNHSFHCSCISKW--TDSSCPVCR 137
E A A + C +CL + D + +L +C HSFH CI KW + SSCP CR
Sbjct: 87 ESTSGAAAEEGDSTECAICLTDFADGEEIRVLP-LCGHSFHVECIDKWLVSRSSCPSCR 144
>UNIPROTKB|Q6PAW2 [details] [associations]
symbol:usp16 "Ubiquitin carboxyl-terminal hydrolase 16"
species:8355 "Xenopus laevis" [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0007067 "mitosis" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016578 "histone deubiquitination" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0043130 "ubiquitin binding"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0051289 "protein
homotetramerization" evidence=ISS] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
GO:GO:0005634 GO:GO:0045893 GO:GO:0051301 GO:GO:0007067
GO:GO:0009952 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0042393 GO:GO:0043130 GO:GO:0004197
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 HSSP:P40818 CTD:10600
HOVERGEN:HBG062704 KO:K11844 EMBL:BC060022 RefSeq:NP_001083244.1
UniGene:Xl.32808 ProteinModelPortal:Q6PAW2 SMR:Q6PAW2 GeneID:398823
KEGG:xla:398823 Xenbase:XB-GENE-1007170 Uniprot:Q6PAW2
Length = 901
Score = 120 (47.3 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 47/168 (27%), Positives = 76/168 (45%)
Query: 135 VCRYCQQQPEKSICFVCQTSEN--LWMCVICGFVGCGRYK-GGHAIIHW---KETEHCYS 188
+C+ CQ ++ +++E+ +W+C+ CG GCGR HA+ H+ + HC
Sbjct: 44 MCQDCQADNKEKNNSEDESAEDPSVWLCLKCGHRGCGRNSVAQHALNHYNTPRSEPHCLV 103
Query: 189 LELETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDSGTSDALLSS 248
L ++ W Y DN V S+ G+LV+ K N S V +
Sbjct: 104 LNVDMWSAWCYLCDNEVPYNRTSRL-GQLVDYLQRKAKAK-NKNSNSVVSNE------EV 155
Query: 249 KVEAIVNEYNELLAAQLENQKIYYETLLQEAKEETEKIISEAVKKAIA 296
K E IV E NE+ Q +++K + QE T+KI +E K ++
Sbjct: 156 KTE-IVTE-NEVKKIQYQDEKPDVQAK-QEKASSTQKISTEPTVKGLS 200
Score = 45 (20.9 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 342 KMALRAKDDKIQDSEAQLRDLMAYLEAEKTLQQLSIS 378
K A+R K + QDS+ LR L+ + E+ +Q+++++
Sbjct: 289 KKAIRFKGYQQQDSQELLRYLLDGMRGEE-IQRVTLA 324
>ZFIN|ZDB-GENE-040426-1024 [details] [associations]
symbol:rnf181 "ring finger protein 181"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 ZFIN:ZDB-GENE-040426-1024 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:COG5540
GeneTree:ENSGT00530000062967 CTD:51255 HOGENOM:HOG000031081
HOVERGEN:HBG108412 OMA:EEQYRQN OrthoDB:EOG40VVQW EMBL:CU041374
EMBL:BC050161 IPI:IPI00492404 IPI:IPI00890554 RefSeq:NP_956600.1
UniGene:Dr.84789 ProteinModelPortal:Q7ZW78 STRING:Q7ZW78
Ensembl:ENSDART00000029450 Ensembl:ENSDART00000134728
Ensembl:ENSDART00000140392 GeneID:393276 KEGG:dre:393276
InParanoid:Q7ZW78 NextBio:20814333 Bgee:Q7ZW78 Uniprot:Q7ZW78
Length = 156
Score = 104 (41.7 bits), Expect = 0.00080, P = 0.00080
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 80 SLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTD--SSCPVCR 137
SL V +P + + CPVCL ++ S + C H FH CI W + +SCP+CR
Sbjct: 62 SLPVVIISPEQADKGVKCPVCLLEFEEQES-VREMPCKHLFHTGCILPWLNKTNSCPLCR 120
>ASPGD|ASPL0000044927 [details] [associations]
symbol:AN1658 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 EMBL:BN001307 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AACD01000026
eggNOG:NOG265447 OrthoDB:EOG42NN8X RefSeq:XP_659262.1
ProteinModelPortal:Q5BCS2 EnsemblFungi:CADANIAT00008299
GeneID:2875458 KEGG:ani:AN1658.2 Uniprot:Q5BCS2
Length = 238
Score = 111 (44.1 bits), Expect = 0.00081, P = 0.00081
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 78 TGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW---TDSSCP 134
+ S+EH + A + C +C+E D D S I C+H +H +C+ W + CP
Sbjct: 149 SASVEH-EVASSHGDAHRECAICMEDFDDDDS-IRALTCDHIYHATCLDPWFTKRQARCP 206
Query: 135 VCRYCQQQPE 144
+C+ C PE
Sbjct: 207 LCKTCYY-PE 215
>UNIPROTKB|F1RJD9 [details] [associations]
symbol:LOC100738479 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR000679 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50114
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 OMA:ACITQNS EMBL:CU856599
Ensembl:ENSSSCT00000016023 Uniprot:F1RJD9
Length = 831
Score = 84 (34.6 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 33/122 (27%), Positives = 67/122 (54%)
Query: 266 ENQKIYYETL--LQEAKEETEKIISEAVKKAIAQKLQKMQAKLDRCVREKKFLDDLNENL 323
E Q+ + E+L L++ ++E EK+ + +K + K Q M+ + R +K+F D L L
Sbjct: 167 EYQERFQESLKKLRQEQQEAEKLAALIREKRASWKNQ-MEPERHRI--QKQF-DQLRSIL 222
Query: 324 LKNQEMWKAKISEIEEREKMAL--RAKDDKIQDSEAQLRDLMAYLEAEKTLQQLSISNEI 381
K ++ K+ E EER+ +++ A+ + +Q S++ LR+L++ LE + ++
Sbjct: 223 DKEEQRQLRKLEE-EERKGLSVIAEAEGELLQQSQS-LRELISDLERRCQGSMTELLQDV 280
Query: 382 KD 383
+D
Sbjct: 281 RD 282
Score = 82 (33.9 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCISK----WT-----DSSCPVCR 137
E+ +CP+CLE L L+ C HSF +CI++ W +SSCPVC+
Sbjct: 39 EEVTCPLCLELLTDP----LSIDCGHSFCQACITQNSEEWRMDQGGESSCPVCQ 88
>UNIPROTKB|E1BC35 [details] [associations]
symbol:USP45 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 KO:K11844 GeneTree:ENSGT00690000102047
CTD:85015 OMA:CEEKCET EMBL:DAAA02026216 IPI:IPI00710359
RefSeq:NP_001193110.1 UniGene:Bt.61674 PRIDE:E1BC35
Ensembl:ENSBTAT00000037865 GeneID:540972 KEGG:bta:540972
NextBio:20878940 Uniprot:E1BC35
Length = 817
Score = 125 (49.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 36/145 (24%), Positives = 62/145 (42%)
Query: 86 PAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKW-TDSSCPVCRYCQQQPE 144
P A +++P P + D G +H+ + K ++ VC C + E
Sbjct: 11 PEKAKRSKRPPIPHDEDSSDDVAVGFTCQHISHAVSVHHVKKAIAENLWSVCLECVK--E 68
Query: 145 KSICFVCQTS-ENLWMCVICGFVGCGRY-KGGHAIIH---WKETEHCYSLELETQRVWDY 199
+ C ++W+C+ CGF GCG+ +G H++ H W+ HC + L T +W Y
Sbjct: 69 RRFCDGQPVLLPDIWLCLKCGFQGCGKNSEGQHSLKHFKSWRAELHCIIINLSTWIIWCY 128
Query: 200 AGDNYVHRLIQSKTDGKLVE-LNSH 223
D + K ++V+ L H
Sbjct: 129 ECDEKLSTHCNKKVLAQIVDFLQKH 153
Score = 38 (18.4 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 20/90 (22%), Positives = 35/90 (38%)
Query: 206 HRLIQSKTDGKLVELNSHCLHGKDNCGSCDCVDSGTSDALLSSKVEAIVNEYNELLAAQL 265
H + QS + S+ K+ C C+ TS LL N+LL
Sbjct: 597 HMVSQSPQNAFQTLSQSYITTSKE-CSVQSCLYQFTSMELLMGN--------NKLLCENC 647
Query: 266 ENQKIYYETLLQEAKEETEKIISEAVKKAI 295
+K Y+ A+++ E + + A K+ +
Sbjct: 648 TEKKQKYQKETTSAEKKAEGVYTNARKQLL 677
>RGD|1304579 [details] [associations]
symbol:Trim5 "tripartite motif-containing 5" species:10116
"Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0002218 "activation of innate immune response"
evidence=ISO] [GO:0002221 "pattern recognition receptor signaling
pathway" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008329 "pattern recognition receptor activity" evidence=ISO]
[GO:0031664 "regulation of lipopolysaccharide-mediated signaling
pathway" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISO] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0070206 "protein trimerization" evidence=IEA;ISO]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
RGD:1304579 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
EMBL:CH473956 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
HOVERGEN:HBG001357 HOGENOM:HOG000234134 eggNOG:NOG310455
OrthoDB:EOG4229JJ CTD:85363 KO:K10648 EMBL:AC113720 EMBL:BC078926
IPI:IPI00475551 RefSeq:NP_001014045.1 UniGene:Rn.12117 SMR:Q6AYT1
STRING:Q6AYT1 Ensembl:ENSRNOT00000023100 GeneID:308906
KEGG:rno:308906 UCSC:RGD:1304579 InParanoid:Q6AYT1 NextBio:659774
Genevestigator:Q6AYT1 Uniprot:Q6AYT1
Length = 511
Score = 81 (33.6 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 25/93 (26%), Positives = 48/93 (51%)
Query: 291 VKKAIAQKLQKMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDD 350
+++ + + +K+QA L + + +KK ++ ++L K + W+ +I + E + + D
Sbjct: 132 IEEVVQEYKEKLQAALQKLMADKKEFENWKDDLQKERTYWQNQIQKDVENVQSEFKGMRD 191
Query: 351 KIQDSEA--QLRDLMAYLEAEKTLQQLSIS-NE 380
I DSE +L+ LM E E + L S NE
Sbjct: 192 -IMDSEEKKELQKLMQ--EKEDIMSSLEESENE 221
Score = 80 (33.2 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 93 EQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDSSCPVCRYCQQQPEKSICFVCQ 152
E+ +CP+CL+ + + SG C HSF +CI+ +SS C Q ++ IC VC+
Sbjct: 11 EEVTCPICLDLMVEPVSGD----CGHSFCQACITLNYESS-----KCNQ--DEFICPVCR 59
Query: 153 TS 154
S
Sbjct: 60 VS 61
>UNIPROTKB|F1SVB7 [details] [associations]
symbol:RNF181 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:51255 OMA:EEQYRQN EMBL:FP325280
EMBL:CU928286 RefSeq:NP_001230307.1 RefSeq:XP_003124989.1
UniGene:Ssc.18173 Ensembl:ENSSSCT00000009015
Ensembl:ENSSSCT00000028874 GeneID:100518605 GeneID:100628060
KEGG:ssc:100518605 KEGG:ssc:100628060 Uniprot:F1SVB7
Length = 153
Score = 103 (41.3 bits), Expect = 0.00089, P = 0.00089
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 91 STEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTD--SSCPVCRY 138
S + CPVCL +++ + I C+H FH CI W +SCP+CR+
Sbjct: 70 SQAELKCPVCLLEFEEEETAIEMP-CHHLFHSGCILPWLSKTNSCPLCRH 118
>TAIR|locus:2015248 [details] [associations]
symbol:AT1G63170 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC010795 eggNOG:NOG277561 HOGENOM:HOG000240958
ProtClustDB:CLSN2682050 EMBL:AY058092 EMBL:AY086095 IPI:IPI00547063
PIR:C96657 RefSeq:NP_564810.1 UniGene:At.26656
ProteinModelPortal:Q8LDB8 SMR:Q8LDB8 EnsemblPlants:AT1G63170.1
GeneID:842621 KEGG:ath:AT1G63170 TAIR:At1g63170 InParanoid:Q8LDB8
OMA:ANTMISF PhylomeDB:Q8LDB8 Genevestigator:Q8LDB8 Uniprot:Q8LDB8
Length = 381
Score = 114 (45.2 bits), Expect = 0.00099, P = 0.00099
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 76 GYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWT--DSSC 133
G +EH P E C +CL + +T + C H FHC C+ KW +++C
Sbjct: 309 GTDSPVEHALPH-----EDAECCICLSAYEDETE-LRELPCGHHFHCGCVDKWLYINATC 362
Query: 134 PVCRY 138
P+C+Y
Sbjct: 363 PLCKY 367
>WB|WBGene00001328 [details] [associations]
symbol:epi-1 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007414 "axonal
defasciculation" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0071711 "basement membrane organization"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0009408 "response to heat" evidence=IMP]
[GO:0010950 "positive regulation of endopeptidase activity"
evidence=IMP] [GO:0051788 "response to misfolded protein"
evidence=IMP] InterPro:IPR010307 Pfam:PF06009 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0001764 GO:GO:0002119 GO:GO:0010171 GO:GO:0040017
GO:GO:0007155 GO:GO:0009408 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042127 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0040035 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0010950
GO:GO:0005604 GO:GO:0071711 GO:GO:0040027 Pfam:PF02210
GO:GO:0051788 EMBL:Z70286 UniGene:Cel.18380 GeneID:177956
KEGG:cel:CELE_K08C7.3 CTD:177956 GeneTree:ENSGT00700000104140
NextBio:899114 GO:GO:0007414 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 EMBL:AB001074
EMBL:AB016806 PIR:T37316 RefSeq:NP_001023281.1 HSSP:Q92956
ProteinModelPortal:G5EEV6 SMR:G5EEV6 PRIDE:G5EEV6
EnsemblMetazoa:K08C7.3a.1 EnsemblMetazoa:K08C7.3a.2
WormBase:K08C7.3a OMA:CHHALLD Uniprot:G5EEV6
Length = 3704
Score = 92 (37.4 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 47/187 (25%), Positives = 69/187 (36%)
Query: 72 VQFTGYTGSLEHVQPAPASSTEQPSCPVCLERLDQDTSGILTTICNHSFHCSCISKWTDS 131
VQ + G+ + S+T P +C + + +T+G CN H + +
Sbjct: 1818 VQSGSFLGACVPCECNGHSATCDPDTGICTD-CEHNTNGDHCEFCNEG-HYGNATNGSPY 1875
Query: 132 SCPVCRYCQQQPEKSICFVCQTSEN--LWMCVIC--GFVG--CGRYKGG---HAIIHWKE 182
C C C P + C SE L C C G+ G C R G H I +
Sbjct: 1876 DCMACA-CPFAPTNNFAKSCDVSEEGQLLQCN-CKPGYTGDRCDRCASGFFGHPQISGES 1933
Query: 183 TEHCY---SLELETQR-VWDYAGDNYVHRLIQSKTDGKLVELNSHCLHGK----DNCGSC 234
C + L R +GD Y L + TDG+ E + +G NC SC
Sbjct: 1934 CSPCQCNGNNNLTDSRSCHPNSGDCY---LCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 235 DCVDSGT 241
+C G+
Sbjct: 1991 ECSQCGS 1997
Score = 86 (35.3 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 36/129 (27%), Positives = 68/129 (52%)
Query: 239 SGTSDALLSSKVEAIVNEYNELLAAQLENQKIYYETLLQEAKEETEKIISEAVKKAIAQK 298
S +D L ++K + I N Y E L+A+ + + +ET++ I +A+ K ++Q
Sbjct: 2486 SNLTDTLKNAKAQ-IDNAY-EALSAEPAFAESVQNARDKPFPDETKEKI-DALSKTVSQD 2542
Query: 299 LQKMQAKLDRCVREKKFLDDLNENLLKNQEMWKAKISEIEEREKMALRAKDDKIQDSEAQ 358
L++ + KL + + + L +L+E L K +E KA I + K L + D+K+Q+ E
Sbjct: 2543 LKETE-KLKKQLEQ---LTELSEKLRKRKEAVKAGIPKYS---KNTLDSIDEKVQEVEKL 2595
Query: 359 LRDLMAYLE 367
++ A +E
Sbjct: 2596 KAEIDANIE 2604
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.132 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 407 394 0.00095 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 144
No. of states in DFA: 623 (66 KB)
Total size of DFA: 289 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.25u 0.15s 44.40t Elapsed: 00:00:02
Total cpu time: 44.28u 0.15s 44.43t Elapsed: 00:00:02
Start: Sat May 11 00:17:51 2013 End: Sat May 11 00:17:53 2013
WARNINGS ISSUED: 1