Your job contains 1 sequence.
>015427
MAWWSSASASSTFNSSFLLRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIV
TNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAV
LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI
FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVL
GVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV
IGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKL
SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015427
(407 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076954 - symbol:AT3G02690 species:3702 "Arabi... 1127 2.8e-114 1
UNIPROTKB|Q3Z7M8 - symbol:DET1056 "Membrane protein, puta... 221 3.3e-18 1
TIGR_CMR|DET_1056 - symbol:DET_1056 "membrane protein, pu... 221 3.3e-18 1
TIGR_CMR|SPO_3584 - symbol:SPO_3584 "membrane protein, dr... 137 2.2e-14 2
UNIPROTKB|Q3AAZ7 - symbol:CHY_1867 "Putative membrane pro... 186 1.9e-12 1
TIGR_CMR|CHY_1867 - symbol:CHY_1867 "putative membrane pr... 186 1.9e-12 1
TIGR_CMR|BA_0829 - symbol:BA_0829 "transporter, EamA fami... 173 7.3e-11 1
UNIPROTKB|P0AA70 - symbol:yedA "putative membrane transpo... 169 2.3e-10 1
TIGR_CMR|BA_3061 - symbol:BA_3061 "transporter, EamA fami... 158 4.4e-09 1
UNIPROTKB|Q5LM21 - symbol:SPO3743 "Membrane protein, puta... 117 7.1e-09 2
TIGR_CMR|SPO_3743 - symbol:SPO_3743 "membrane protein, pu... 117 7.1e-09 2
UNIPROTKB|Q8E8X4 - symbol:SO_4527 "10 TMS drug/metabolite... 99 1.1e-08 2
TIGR_CMR|SO_4527 - symbol:SO_4527 "integral membrane doma... 99 1.1e-08 2
TIGR_CMR|BA_2736 - symbol:BA_2736 "transporter, EamA fami... 153 1.7e-08 1
TIGR_CMR|BA_2672 - symbol:BA_2672 "transporter, EamA fami... 141 4.2e-07 1
UNIPROTKB|P31437 - symbol:yicL "inhibitor of heme biosynt... 141 4.3e-07 1
UNIPROTKB|Q4KB90 - symbol:PFL_3388 "Putative membrane pro... 132 5.1e-06 1
UNIPROTKB|Q723F4 - symbol:LMOf2365_0525 "Putative membran... 89 5.1e-06 2
UNIPROTKB|P0ABT8 - symbol:yijE "predicted permease" speci... 129 9.8e-06 1
TIGR_CMR|BA_1915 - symbol:BA_1915 "transporter, EamA fami... 127 1.6e-05 1
UNIPROTKB|Q47UH2 - symbol:CPS_4912 "Membrane protein" spe... 125 2.7e-05 1
TIGR_CMR|CPS_4912 - symbol:CPS_4912 "membrane protein" sp... 125 2.7e-05 1
UNIPROTKB|Q88B23 - symbol:PSPTO_0210 "Membrane protein, p... 123 4.4e-05 1
TIGR_CMR|BA_1759 - symbol:BA_1759 "transporter, EamA fami... 112 6.1e-05 2
UNIPROTKB|Q47X10 - symbol:CPS_4003 "Membrane protein" spe... 92 8.9e-05 2
TIGR_CMR|CPS_4003 - symbol:CPS_4003 "membrane protein" sp... 92 8.9e-05 2
UNIPROTKB|P31125 - symbol:eamA "O-acetylserine/cysteine e... 120 0.00010 1
UNIPROTKB|Q4KGL8 - symbol:PFL_1488 "Integral membrane pro... 89 0.00019 2
TIGR_CMR|BA_0411 - symbol:BA_0411 "transporter, EamA fami... 118 0.00019 1
UNIPROTKB|Q4KGE1 - symbol:PFL_1566 "Integral membrane pro... 103 0.00022 2
UNIPROTKB|Q5LTZ8 - symbol:SPO1262 "Membrane protein, puta... 116 0.00029 1
TIGR_CMR|SPO_1262 - symbol:SPO_1262 "membrane protein, pu... 116 0.00029 1
UNIPROTKB|Q602U4 - symbol:MCA2967 "Putative membrane prot... 114 0.00047 1
UNIPROTKB|Q3A9Z5 - symbol:CHY_2226 "Putative membrane pro... 101 0.00059 2
TIGR_CMR|CHY_2226 - symbol:CHY_2226 "putative membrane pr... 101 0.00059 2
>TAIR|locus:2076954 [details] [associations]
symbol:AT3G02690 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;ISS] InterPro:IPR000620 Pfam:PF00892 GO:GO:0009507
EMBL:AC021640 EMBL:CP002686 GO:GO:0016020 eggNOG:COG0697
EMBL:AF428434 EMBL:AY045633 EMBL:AY133570 EMBL:AY087405
IPI:IPI00547917 RefSeq:NP_566180.1 UniGene:At.18824
UniGene:At.53162 UniGene:At.75116 IntAct:Q93V85 STRING:Q93V85
PRIDE:Q93V85 EnsemblPlants:AT3G02690.1 GeneID:821274
KEGG:ath:AT3G02690 GeneFarm:3094 TAIR:At3g02690
HOGENOM:HOG000275238 InParanoid:Q93V85 OMA:NGQHVAL PhylomeDB:Q93V85
ProtClustDB:CLSN2688009 Genevestigator:Q93V85 Uniprot:Q93V85
Length = 417
Score = 1127 (401.8 bits), Expect = 2.8e-114, P = 2.8e-114
Identities = 225/345 (65%), Positives = 259/345 (75%)
Query: 61 TNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAV 120
+N +T ++ SSS+VDCV G+DVEC+ + D EE + G+ G LEW V
Sbjct: 73 SNNSTEETESSSSSSSVDCVGMGSDVECVNNGED-EENRSSGILSGGE----GTFLEWTV 127
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L+SPFFFWGTAMVAMKEVLP G FFVAAFRLIPAGLLL+ FA +GR LP G NAW SI
Sbjct: 128 LISPFFFWGTAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSI 187
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
LFALVDA+CFQGFLAQGLQRTSAGLGSVIIDSQPL+VAVLA+ LFGES
Sbjct: 188 ALFALVDATCFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLL 247
Query: 241 XXXXXXXXEAPAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWH 298
E P+ D +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWH
Sbjct: 248 GVAGLLLLEVPSVTSDGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWH 307
Query: 299 MVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXX 358
MVIGGLPL+ ISV+NHDPV+ S+++L+++D++ALLYTSIFGSA+SYGVYFY
Sbjct: 308 MVIGGLPLLAISVINHDPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLT 367
Query: 359 XXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 403
PMFASIFG+LYL ETFS LQLVGAAVT+VAIYLVNF
Sbjct: 368 KLSSLTFLTPMFASIFGYLYLNETFSSLQLVGAAVTLVAIYLVNF 412
>UNIPROTKB|Q3Z7M8 [details] [associations]
symbol:DET1056 "Membrane protein, putative" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0697 RefSeq:YP_181771.1
STRING:Q3Z7M8 GeneID:3229634 KEGG:det:DET1056 PATRIC:21609157
HOGENOM:HOG000184105 OMA:ITRMRLP ProtClustDB:CLSK837118
BioCyc:DETH243164:GJNF-1057-MONOMER Uniprot:Q3Z7M8
Length = 287
Score = 221 (82.9 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 73/286 (25%), Positives = 121/286 (42%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L+ FW +A A++ L +A R + A L L+ +A +LP + +I
Sbjct: 9 LIFTILFWSSAFAAIRVSLADYSPSHLALLRFLVASLALVIYALITRMRLPDKRDL-PAI 67
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
FL L+ S + L G + +AG S+II S P+ +LA + +
Sbjct: 68 FLLGLIGISLYHFALNYGEKTVTAGAASLIIASAPIFSVLLARFFYKDKLTPAGWLGILL 127
Query: 241 XXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVR-WVSKYSDPVMATGWHM 299
E + + +W+LLAA ++ V R + KYS +T +
Sbjct: 128 SFGGIAVI---TLGEGQTLSFEPHAFWVLLAALFTSIYIVFQRPLLKKYSGFEFST--YA 182
Query: 300 VIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXX 359
+ G L+++ P + + E +S LA++Y IF +AISY +Y Y
Sbjct: 183 IWAGTLLLMVGA----PGLLKEISEAPASSTLAVVYLGIFPTAISYLLYSYALSKARISQ 238
Query: 360 XXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 405
P+FA FL+LGE +P+ L+G + + + LVN G
Sbjct: 239 VISFLYLNPVFAIGIAFLWLGEIPAPISLLGGLLALAGVILVNRYG 284
>TIGR_CMR|DET_1056 [details] [associations]
symbol:DET_1056 "membrane protein, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0697 RefSeq:YP_181771.1
STRING:Q3Z7M8 GeneID:3229634 KEGG:det:DET1056 PATRIC:21609157
HOGENOM:HOG000184105 OMA:ITRMRLP ProtClustDB:CLSK837118
BioCyc:DETH243164:GJNF-1057-MONOMER Uniprot:Q3Z7M8
Length = 287
Score = 221 (82.9 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 73/286 (25%), Positives = 121/286 (42%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L+ FW +A A++ L +A R + A L L+ +A +LP + +I
Sbjct: 9 LIFTILFWSSAFAAIRVSLADYSPSHLALLRFLVASLALVIYALITRMRLPDKRDL-PAI 67
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
FL L+ S + L G + +AG S+II S P+ +LA + +
Sbjct: 68 FLLGLIGISLYHFALNYGEKTVTAGAASLIIASAPIFSVLLARFFYKDKLTPAGWLGILL 127
Query: 241 XXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVR-WVSKYSDPVMATGWHM 299
E + + +W+LLAA ++ V R + KYS +T +
Sbjct: 128 SFGGIAVI---TLGEGQTLSFEPHAFWVLLAALFTSIYIVFQRPLLKKYSGFEFST--YA 182
Query: 300 VIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXX 359
+ G L+++ P + + E +S LA++Y IF +AISY +Y Y
Sbjct: 183 IWAGTLLLMVGA----PGLLKEISEAPASSTLAVVYLGIFPTAISYLLYSYALSKARISQ 238
Query: 360 XXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 405
P+FA FL+LGE +P+ L+G + + + LVN G
Sbjct: 239 VISFLYLNPVFAIGIAFLWLGEIPAPISLLGGLLALAGVILVNRYG 284
>TIGR_CMR|SPO_3584 [details] [associations]
symbol:SPO_3584 "membrane protein, drug/metabolite
transporter (DMT) family" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006810
"transport" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR RefSeq:YP_168779.1
ProteinModelPortal:Q5LMH9 GeneID:3193360 KEGG:sil:SPO3584
PATRIC:23380645 HOGENOM:HOG000275237 KO:K15269 OMA:NLTFTAW
Uniprot:Q5LMH9
Length = 306
Score = 137 (53.3 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 272 AQSMAVGTVMVR-WVSKYSDPVMA-TGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSD 329
A SMAVG V+ R W + P++ T W + GGL L+ ++ L G L+ ++
Sbjct: 156 ALSMAVGVVLTRKW--RPDVPLVTFTAWQLTAGGLLLIPVAWLAAPDWPG-----LSLTN 208
Query: 330 ILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLV 389
+ AL + + G A++Y ++F P+ A I G+L LGE SP+Q +
Sbjct: 209 LAALAWLGLIGGALTYILWFRGLARIEPAAVSLLGILSPLTAVILGWLALGEALSPVQGL 268
Query: 390 GAAVTVVAIYL 400
GA + + A+++
Sbjct: 269 GAVIVLGAVWI 279
Score = 112 (44.5 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 30/101 (29%), Positives = 46/101 (45%)
Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVS-IFLFALV 186
WG++ + LP F VA R +PAGLLL+ RKLP W+ + + +
Sbjct: 21 WGSSYFVTTQFLPAHSPFVVALLRALPAGLLLMLLV----RKLPP--RGWIGRLLILGAL 74
Query: 187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFG 227
+ + F L R G+ + + QPL V L+A+ G
Sbjct: 75 NFAVFWSLLFVAAYRLPGGVAATVGAVQPLLVVFLSAVALG 115
>UNIPROTKB|Q3AAZ7 [details] [associations]
symbol:CHY_1867 "Putative membrane protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0697
RefSeq:YP_360687.1 STRING:Q3AAZ7 GeneID:3728099 KEGG:chy:CHY_1867
PATRIC:21276829 HOGENOM:HOG000245425 OMA:HIPPLAY
ProtClustDB:CLSK941309 BioCyc:CHYD246194:GJCN-1866-MONOMER
Uniprot:Q3AAZ7
Length = 303
Score = 186 (70.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 65/263 (24%), Positives = 110/263 (41%)
Query: 145 FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSA 204
FF F L+P L I + KL +G + ++ FL L++ FL G+ T A
Sbjct: 39 FFFGGFVLLPVALSNI---KRKNVKL-TGSD-FLFAFLIGLLNVVLSMSFLQIGINMTKA 93
Query: 205 GLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSG 264
L + I S PL V + A L+ E + S ++G
Sbjct: 94 SLAAAIFSSNPLFVVLFAYLILDEKLNFQKILGLFIGIVGVVIVFYKDLELGISHVYGI- 152
Query: 265 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE 324
++LAA + + TV+ + S+ +D V+ + ++G + L+ I +L H P++
Sbjct: 153 -LMLILAAVTYGLYTVLGKRFSQKTDSVIMNSFSFILGSVFLLPIILLKHYPLFS----- 206
Query: 325 LTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFS 384
L IL + Y + F + ++Y YF P+ AS F + LGE +
Sbjct: 207 LQPKAILPMAYLTFFVTGLAYYTYFLGLTNISAGNGSMVFFIKPVLASFFAWAILGEKIT 266
Query: 385 PLQLVGAAVTVVAIYLVNFRGSV 407
+ G V ++ IY+V + G V
Sbjct: 267 FEFIAGTMVILLGIYIVQWAGQV 289
>TIGR_CMR|CHY_1867 [details] [associations]
symbol:CHY_1867 "putative membrane protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0697 RefSeq:YP_360687.1
STRING:Q3AAZ7 GeneID:3728099 KEGG:chy:CHY_1867 PATRIC:21276829
HOGENOM:HOG000245425 OMA:HIPPLAY ProtClustDB:CLSK941309
BioCyc:CHYD246194:GJCN-1866-MONOMER Uniprot:Q3AAZ7
Length = 303
Score = 186 (70.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 65/263 (24%), Positives = 110/263 (41%)
Query: 145 FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSA 204
FF F L+P L I + KL +G + ++ FL L++ FL G+ T A
Sbjct: 39 FFFGGFVLLPVALSNI---KRKNVKL-TGSD-FLFAFLIGLLNVVLSMSFLQIGINMTKA 93
Query: 205 GLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSG 264
L + I S PL V + A L+ E + S ++G
Sbjct: 94 SLAAAIFSSNPLFVVLFAYLILDEKLNFQKILGLFIGIVGVVIVFYKDLELGISHVYGI- 152
Query: 265 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE 324
++LAA + + TV+ + S+ +D V+ + ++G + L+ I +L H P++
Sbjct: 153 -LMLILAAVTYGLYTVLGKRFSQKTDSVIMNSFSFILGSVFLLPIILLKHYPLFS----- 206
Query: 325 LTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFS 384
L IL + Y + F + ++Y YF P+ AS F + LGE +
Sbjct: 207 LQPKAILPMAYLTFFVTGLAYYTYFLGLTNISAGNGSMVFFIKPVLASFFAWAILGEKIT 266
Query: 385 PLQLVGAAVTVVAIYLVNFRGSV 407
+ G V ++ IY+V + G V
Sbjct: 267 FEFIAGTMVILLGIYIVQWAGQV 289
>TIGR_CMR|BA_0829 [details] [associations]
symbol:BA_0829 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR OMA:IFLGEEL
RefSeq:NP_843346.1 RefSeq:YP_017467.1 RefSeq:YP_027065.1
IntAct:Q81UN5 DNASU:1088044 EnsemblBacteria:EBBACT00000010024
EnsemblBacteria:EBBACT00000015709 EnsemblBacteria:EBBACT00000022247
GeneID:1088044 GeneID:2814609 GeneID:2853121 KEGG:ban:BA_0829
KEGG:bar:GBAA_0829 KEGG:bat:BAS0789 HOGENOM:HOG000084080
ProtClustDB:CLSK915986 BioCyc:BANT260799:GJAJ-869-MONOMER
BioCyc:BANT261594:GJ7F-899-MONOMER Uniprot:Q81UN5
Length = 303
Score = 173 (66.0 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 60/282 (21%), Positives = 114/282 (40%)
Query: 120 VLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVS 179
+L+ WG V K ++ A + + R I A + L+ + +K+ A +
Sbjct: 8 LLLLTSLLWGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWFKEKKIIPPRAAILP 67
Query: 180 IFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXX 239
+ L + + F F L++TSA +I +S+A+ + L E
Sbjct: 68 LILMGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMI 127
Query: 240 XXXXXXXXXEAPA-FDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWH 298
F S + SG+ WM+ A + +V +W +K + P+MAT +
Sbjct: 128 LSFFGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYS 187
Query: 299 MVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXX 358
+ G + L+ ++ + +V + +S I +LLYT + + + +
Sbjct: 188 GIFGVILLLPFNIGSF------TVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGAT 241
Query: 359 XXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL 400
P+F +I FL+LGE + +Q+VG + + YL
Sbjct: 242 TSGIFLNFNPIFTAILAFLFLGEELTWIQIVGTMIVMTGCYL 283
>UNIPROTKB|P0AA70 [details] [associations]
symbol:yedA "putative membrane transport protein"
species:83333 "Escherichia coli K-12" [GO:0055085 "transmembrane
transport" evidence=IMP;RCA] [GO:0022857 "transmembrane transporter
activity" evidence=IMP;RCA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA;RCA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR000620
InterPro:IPR004779 Pfam:PF00892 GO:GO:0016021 GO:GO:0005886
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG0697 GO:GO:0022857 EMBL:X13330
PIR:JS0266 RefSeq:NP_416468.1 RefSeq:YP_490212.1
ProteinModelPortal:P0AA70 EnsemblBacteria:EBESCT00000001675
EnsemblBacteria:EBESCT00000014501 GeneID:12932061 GeneID:946461
KEGG:ecj:Y75_p1928 KEGG:eco:b1959 PATRIC:32119247 EchoBASE:EB1131
EcoGene:EG11141 HOGENOM:HOG000258419 OMA:AYMALVQ
ProtClustDB:PRK11272 BioCyc:EcoCyc:EG11141-MONOMER
BioCyc:ECOL316407:JW1942-MONOMER Genevestigator:P0AA70
TIGRFAMs:TIGR00950 Uniprot:P0AA70
Length = 306
Score = 169 (64.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 72/297 (24%), Positives = 121/297 (40%)
Query: 110 MELGMLLE-WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGR 168
M LL + L + + WG+ ++ + +A R + AG+LL+ F +G
Sbjct: 1 MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGH 60
Query: 169 KLPSGFNAWVSIFLFALVDASCFQGFLAQGL-QRTSAGLGSVIIDSQPLSVAVLAALLFG 227
KLP ++ L L+ + G + Q +G+ +V++ + PL + L FG
Sbjct: 61 KLPP-LRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FG 118
Query: 228 ESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK 287
+ N WG+ +L+ + S A G+V + S+
Sbjct: 119 IKTRKLEWVGIAIGLAGIIMLNSGGNLSGNP--WGA--ILILIGSISWAFGSV---YGSR 171
Query: 288 YSDPV--MATGWHMVIGGLPLMVISVLNHDPVYGESVKELTS-SDILALLYTSIFGSAIS 344
+ PV MA M+ G+ LM+ S+ + GE + L S S LA+ Y ++FGS I+
Sbjct: 172 ITLPVGMMAGAIEMLAAGVVLMIASM-----IAGEKLTALPSLSGFLAVGYLALFGSIIA 226
Query: 345 YGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV 401
Y Y P+ A + G GET S ++ + V V A+ LV
Sbjct: 227 INAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLV 283
>TIGR_CMR|BA_3061 [details] [associations]
symbol:BA_3061 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR OMA:NTLTWPV
HOGENOM:HOG000093012 ProtClustDB:CLSK916911 RefSeq:NP_845391.1
RefSeq:YP_019702.1 RefSeq:YP_029105.1 DNASU:1088199
EnsemblBacteria:EBBACT00000010502 EnsemblBacteria:EBBACT00000015515
EnsemblBacteria:EBBACT00000023157 GeneID:1088199 GeneID:2817371
GeneID:2850052 KEGG:ban:BA_3061 KEGG:bar:GBAA_3061 KEGG:bat:BAS2848
BioCyc:BANT260799:GJAJ-2910-MONOMER
BioCyc:BANT261594:GJ7F-3013-MONOMER Uniprot:Q81NW1
Length = 303
Score = 158 (60.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 66/297 (22%), Positives = 119/297 (40%)
Query: 116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAG--LLLITFASSQGRKLPSG 173
+EW +LVS WG K + + + R + A LLLITF + ++
Sbjct: 6 MEW-LLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSLRIER- 63
Query: 174 FNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE--SXX 231
W+ + +V + +Q ++ TSA S++I P+ +LA L E S
Sbjct: 64 -KDWLRLVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHKQERFSMK 122
Query: 232 XXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVR-WVSKYSD 290
+ W G L+AA + ++ + ++KYS
Sbjct: 123 VQIGSIVAFIGAAFVLLTGHTGGATYEYAW-LGNIIGLVAAIAWGWYPILAQPLITKYS- 180
Query: 291 PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFY 350
+ T W +IG +PL++ + N + + V L+ +L Y+ IF + +++
Sbjct: 181 AMRVTSWSTLIGIVPLVIYCLFNVNSLTWP-VDTLSWG---SLAYSIIFATIFGLAMWYV 236
Query: 351 XXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV 407
P+FA IF + +GE + +QLVG + V +Y+V +G +
Sbjct: 237 GISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVK-KGGI 292
>UNIPROTKB|Q5LM21 [details] [associations]
symbol:SPO3743 "Membrane protein, putative" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR RefSeq:YP_168937.1 GeneID:3194042
KEGG:sil:SPO3743 PATRIC:23380979 HOGENOM:HOG000138901 OMA:IMGARIT
ProtClustDB:CLSK934262 Uniprot:Q5LM21
Length = 292
Score = 117 (46.2 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 27/103 (26%), Positives = 49/103 (47%)
Query: 126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFAL 185
F W +A + + ++ A F A R + +GLL + A + G+ N W + +F +
Sbjct: 14 FMWSSAFSSARIIVADASPLFSLACRFLISGLLGVIIARAMGQTWRLTRNQWKATIVFGI 73
Query: 186 VDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
+ + G +Q A + ++I + PL VA+ + LFGE
Sbjct: 74 CQNALYLGLNFYAMQTVEASVAAIIASTMPLLVALASWGLFGE 116
Score = 81 (33.6 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 29/133 (21%), Positives = 52/133 (39%)
Query: 270 LAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSD 329
L A ++A T+ +R + + +M G M++G L + + P++ E+V +
Sbjct: 155 LGALALAAATLALRGATSGGNFMMVVGLQMLVGSAVLFLAT-----PIF-ETVHVTPTLP 208
Query: 330 I-LALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQL 388
+ LA YT++ + V+ P+F LGE L
Sbjct: 209 LALAFAYTTLVPGLTATFVWVLLLNRIGAIRAATFHFLNPVFGVAIAAALLGERLGALDA 268
Query: 389 VGAAVTVVAIYLV 401
+G A+T I V
Sbjct: 269 IGVAITTAGILAV 281
>TIGR_CMR|SPO_3743 [details] [associations]
symbol:SPO_3743 "membrane protein, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR RefSeq:YP_168937.1 GeneID:3194042
KEGG:sil:SPO3743 PATRIC:23380979 HOGENOM:HOG000138901 OMA:IMGARIT
ProtClustDB:CLSK934262 Uniprot:Q5LM21
Length = 292
Score = 117 (46.2 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 27/103 (26%), Positives = 49/103 (47%)
Query: 126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFAL 185
F W +A + + ++ A F A R + +GLL + A + G+ N W + +F +
Sbjct: 14 FMWSSAFSSARIIVADASPLFSLACRFLISGLLGVIIARAMGQTWRLTRNQWKATIVFGI 73
Query: 186 VDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
+ + G +Q A + ++I + PL VA+ + LFGE
Sbjct: 74 CQNALYLGLNFYAMQTVEASVAAIIASTMPLLVALASWGLFGE 116
Score = 81 (33.6 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 29/133 (21%), Positives = 52/133 (39%)
Query: 270 LAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSD 329
L A ++A T+ +R + + +M G M++G L + + P++ E+V +
Sbjct: 155 LGALALAAATLALRGATSGGNFMMVVGLQMLVGSAVLFLAT-----PIF-ETVHVTPTLP 208
Query: 330 I-LALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQL 388
+ LA YT++ + V+ P+F LGE L
Sbjct: 209 LALAFAYTTLVPGLTATFVWVLLLNRIGAIRAATFHFLNPVFGVAIAAALLGERLGALDA 268
Query: 389 VGAAVTVVAIYLV 401
+G A+T I V
Sbjct: 269 IGVAITTAGILAV 281
>UNIPROTKB|Q8E8X4 [details] [associations]
symbol:SO_4527 "10 TMS drug/metabolite efflux pump (DME)
family" species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:AE014299 GenomeReviews:AE014299_GR HOGENOM:HOG000275237
KO:K15269 RefSeq:NP_720046.1 DNASU:1172117 GeneID:1172117
KEGG:son:SO_4527 PATRIC:23528723 OMA:TINIAAF ProtClustDB:CLSK907692
Uniprot:Q8E8X4
Length = 284
Score = 99 (39.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L++P F WGT + L ++VA +R +PAG+LL+ +LP+ AW +
Sbjct: 7 LLAPVF-WGTTYALVSLYLQDMSPYWVAVWRALPAGVLLLMLRP----RLPT--LAWSKL 59
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALL 225
L A + F L G R + + + PL +LA L+
Sbjct: 60 SLLAFCNIGAFFTLLFIGAYRLPGAVAGTLGATLPLIFLILAWLI 104
Score = 99 (39.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 27/122 (22%), Positives = 58/122 (47%)
Query: 283 RWVSKYS--DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDIL-ALLYTSIF 339
RW+ ++ D ++ T W +++GGL L+ ++ L P ++ S D++ +L++ +
Sbjct: 154 RWMQRWDVGDFLVLTAWQLLLGGLMLIPLAWLMAGP------PQIPSMDVVPSLIWLATA 207
Query: 340 GSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIY 399
+A++Y + + P+ A G L +GET Q G V ++++
Sbjct: 208 NTAVAYWAWLWSMRNLGPEIMGMVALVNPVVAVSLGVLIVGETLDMRQWAGILVILLSLL 267
Query: 400 LV 401
L+
Sbjct: 268 LM 269
>TIGR_CMR|SO_4527 [details] [associations]
symbol:SO_4527 "integral membrane domain protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:AE014299 GenomeReviews:AE014299_GR HOGENOM:HOG000275237
KO:K15269 RefSeq:NP_720046.1 DNASU:1172117 GeneID:1172117
KEGG:son:SO_4527 PATRIC:23528723 OMA:TINIAAF ProtClustDB:CLSK907692
Uniprot:Q8E8X4
Length = 284
Score = 99 (39.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
L++P F WGT + L ++VA +R +PAG+LL+ +LP+ AW +
Sbjct: 7 LLAPVF-WGTTYALVSLYLQDMSPYWVAVWRALPAGVLLLMLRP----RLPT--LAWSKL 59
Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALL 225
L A + F L G R + + + PL +LA L+
Sbjct: 60 SLLAFCNIGAFFTLLFIGAYRLPGAVAGTLGATLPLIFLILAWLI 104
Score = 99 (39.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 27/122 (22%), Positives = 58/122 (47%)
Query: 283 RWVSKYS--DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDIL-ALLYTSIF 339
RW+ ++ D ++ T W +++GGL L+ ++ L P ++ S D++ +L++ +
Sbjct: 154 RWMQRWDVGDFLVLTAWQLLLGGLMLIPLAWLMAGP------PQIPSMDVVPSLIWLATA 207
Query: 340 GSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIY 399
+A++Y + + P+ A G L +GET Q G V ++++
Sbjct: 208 NTAVAYWAWLWSMRNLGPEIMGMVALVNPVVAVSLGVLIVGETLDMRQWAGILVILLSLL 267
Query: 400 LV 401
L+
Sbjct: 268 LM 269
>TIGR_CMR|BA_2736 [details] [associations]
symbol:BA_2736 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000258419 RefSeq:NP_845086.1 RefSeq:YP_019376.1
RefSeq:YP_028809.1 DNASU:1087282 EnsemblBacteria:EBBACT00000011317
EnsemblBacteria:EBBACT00000018593 EnsemblBacteria:EBBACT00000023481
GeneID:1087282 GeneID:2815576 GeneID:2848087 KEGG:ban:BA_2736
KEGG:bar:GBAA_2736 KEGG:bat:BAS2549 OMA:PHIFSKR
ProtClustDB:CLSK916775 BioCyc:BANT260799:GJAJ-2614-MONOMER
BioCyc:BANT261594:GJ7F-2707-MONOMER Uniprot:Q81PR5
Length = 305
Score = 153 (58.9 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 62/290 (21%), Positives = 116/290 (40%)
Query: 120 VLVSPFFFWGTAMVAMKEVLPKAGT--FFVAAFRLIPAG-LLLITFASSQGRKLPSGFNA 176
+LV F GT + +K + +AG F A R AG +L+I F + +P F+
Sbjct: 7 ILVCIIF--GTTFLTIKIGI-EAGAPPLFSAGIRFFLAGVILMIIFKLKRKEIMPHIFSR 63
Query: 177 WVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXX 236
+ F L + + A+ Q S+GL +V+ + P+ + +L
Sbjct: 64 RIIYAGFCLTFMTFATLYWAE--QYISSGLAAVLSATGPMMILLLQTKRNKTKLKKEQLL 121
Query: 237 XXXXXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPV---M 293
P + S +W + +++ +G++ + + V +
Sbjct: 122 ALIIALIGVVFVSLPGMHQEISFIWSIACFVLIIGELFYGIGSIRSKEILSDLQSVSLFL 181
Query: 294 ATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDIL-ALLYTSIFGSAISYGVYFYXX 352
G M GG+ L+++S + P +V L S + +LY GS +G+Y++
Sbjct: 182 INGIQMFYGGVLLLIVSFIVEQP----NVTVLASWSVQWPILYLIFIGSIGGHGLYYWLL 237
Query: 353 XXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 402
P+ A I G++ LGE +P+ +GA +V ++L N
Sbjct: 238 SKTNPVFPSTWLYVSPLIAIIVGYIILGEPLNPIMGIGACFILVGVFLAN 287
>TIGR_CMR|BA_2672 [details] [associations]
symbol:BA_2672 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000184105 RefSeq:NP_845031.1 RefSeq:YP_019313.1
RefSeq:YP_028749.1 DNASU:1086514 EnsemblBacteria:EBBACT00000009562
EnsemblBacteria:EBBACT00000017603 EnsemblBacteria:EBBACT00000020207
GeneID:1086514 GeneID:2819334 GeneID:2848829 KEGG:ban:BA_2672
KEGG:bar:GBAA_2672 KEGG:bat:BAS2489 OMA:FILNENI
ProtClustDB:CLSK886770 BioCyc:BANT260799:GJAJ-2554-MONOMER
BioCyc:BANT261594:GJ7F-2647-MONOMER Uniprot:Q81PX0
Length = 304
Score = 141 (54.7 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 54/276 (19%), Positives = 115/276 (41%)
Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVD 187
WG+A A++ L + RL+ A ++L+ F+ +LP +IF+F +
Sbjct: 21 WGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYKLRLPD-LKDIPAIFIFGALG 79
Query: 188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXXXX 247
+ + L G + +AG S+I+ P+ A+ A++ E
Sbjct: 80 FTFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWIGGVISFIGIAF 139
Query: 248 XEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVR-WVSKYSDPVMATGWHMVIGGLPL 306
+F + ++ SG ++LLAA S ++ V ++ KY + + ++
Sbjct: 140 I---SFSQGDAIQLNSGALFILLAAISESLFFVFQSSYLKKYG--FLPFTIYTILSSTVC 194
Query: 307 MVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXX 366
M+I + +Y E + + L+++Y +F + + Y Y
Sbjct: 195 MLIFLPG---MYQEILAAPLEVN-LSVIYLGVFPTVLPYIALAYIISRAGASEATSSLYL 250
Query: 367 XPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 402
P+ A +++LGE + + ++G +T++ I +V+
Sbjct: 251 TPITACFVAWIWLGEVPTLVSIIGGGITILGIVIVH 286
>UNIPROTKB|P31437 [details] [associations]
symbol:yicL "inhibitor of heme biosynthesis" species:83333
"Escherichia coli K-12" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000620 InterPro:IPR004779 Pfam:PF00892 GO:GO:0016021
GO:GO:0005886 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006810 EMBL:L10328 eggNOG:COG0697
TIGRFAMs:TIGR00950 PIR:E65167 RefSeq:NP_418116.1 RefSeq:YP_491775.1
ProteinModelPortal:P31437 EnsemblBacteria:EBESCT00000004055
EnsemblBacteria:EBESCT00000015184 GeneID:12930633 GeneID:948176
KEGG:ecj:Y75_p3515 KEGG:eco:b3660 PATRIC:32122809 EchoBASE:EB1639
EcoGene:EG11688 HOGENOM:HOG000083322 OMA:NRPARDE
ProtClustDB:CLSK880756 BioCyc:EcoCyc:EG11688-MONOMER
BioCyc:ECOL316407:JW3634-MONOMER Genevestigator:P31437
Uniprot:P31437
Length = 307
Score = 141 (54.7 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 64/294 (21%), Positives = 129/294 (43%)
Query: 120 VLVSPFFFWGTAMVAMKEVLPKA--GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAW 177
VL++ WG++ V + ++ ++ + F+ RLI AGL+L+T + G K+ S N
Sbjct: 11 VLIAAVL-WGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGDKIFSIINNH 69
Query: 178 ---VSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAAL--LFGESXXX 232
+S+ +F++V A Q +++++A +V+ Q LS ++ A L +S
Sbjct: 70 KDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVL---QFLSPTIIVAWFSLVRKSRPG 126
Query: 233 XXXXXXXXXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRW-VSKYSD- 290
+ ++ S+ + +W + +A + A T +++Y
Sbjct: 127 ILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLIARYGTL 186
Query: 291 PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE--LTSSDILALLYTSIFGSAISYGVY 348
PV+ GW M+IGGL L+ P Y + S ILA Y + G+++++ +Y
Sbjct: 187 PVV--GWSMLIGGLILL--------PFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLY 236
Query: 349 FYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 402
P+ +++ L LG TF+ +G + + ++ L++
Sbjct: 237 LKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILIS 290
>UNIPROTKB|Q4KB90 [details] [associations]
symbol:PFL_3388 "Putative membrane protein" species:220664
"Pseudomonas protegens Pf-5" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000076
GenomeReviews:CP000076_GR HOGENOM:HOG000184106 RefSeq:YP_260493.1
STRING:Q4KB90 GeneID:3476281 KEGG:pfl:PFL_3388 PATRIC:19876105
eggNOG:NOG311597 OMA:IFFYNLC ProtClustDB:CLSK300052
BioCyc:PFLU220664:GIX8-3403-MONOMER Uniprot:Q4KB90
Length = 318
Score = 132 (51.5 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 65/290 (22%), Positives = 112/290 (38%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL--PS--GFNA 176
L + WG VA + + A+ R + A L L+ F + L PS F
Sbjct: 23 LATVTMIWGGTFVAGRYLAGGLSPLLAASLRFLLASLALLGFMAVARIPLVRPSLRQFGQ 82
Query: 177 WVSIFLFALVDAS-CFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXX 235
+ F + + CF FL GL++ A S+I+ P +A+ + LF E
Sbjct: 83 LALLGFFGIFFYNLCF--FL--GLEQVKASRASLIVALNPAVIALASWALFKERLGRRKL 138
Query: 236 XXXXX---XXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPV 292
P+ + + W G+ +L V ++ R ++ +
Sbjct: 139 LGIALCLCGAALVICSRDPSALAAQAGSW-QGDLLILGCVLGWGVYSLFSRGLNHSLGSL 197
Query: 293 MATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXX 352
+++G L L +++ + ++V L + L+LLY + GSA++Y Y+
Sbjct: 198 QTVTCSILLGTLMLCAATLIRGEFDL-QAVARLNLAQGLSLLYLGVLGSALAYIWYYDGL 256
Query: 353 XXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 402
P+ A I G L LGE SP+ +G A+ + IY N
Sbjct: 257 RRIGATRCGVFIALNPLTAVILGALVLGEQLSPVMGLGGALILGGIYQCN 306
>UNIPROTKB|Q723F4 [details] [associations]
symbol:LMOf2365_0525 "Putative membrane protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000620 Pfam:PF00892
GO:GO:0016020 EMBL:AE017262 GenomeReviews:AE017262_GR
eggNOG:COG0697 RefSeq:YP_013130.1 STRING:Q723F4 GeneID:2799617
KEGG:lmf:LMOf2365_0525 PATRIC:20322255 HOGENOM:HOG000237988
OMA:QYATSAV ProtClustDB:CLSK695291 Uniprot:Q723F4
Length = 319
Score = 89 (36.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 29/137 (21%), Positives = 56/137 (40%)
Query: 264 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVK 323
G+ + +A S A ++++ ++ D + TG+ + +G + L +S E V
Sbjct: 155 GDIDIFIAMASQAFSFIIIKKLAGSMDTGLMTGYMLFLGSVMLFGLSRFMEPGGMSELVA 214
Query: 324 ELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETF 383
+ L + +++ +A VY Y P+F+ I L+LGE
Sbjct: 215 VHSWKLWLLFVVSAVVATAFGNFVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAI 274
Query: 384 SPLQLVGAAVTVVAIYL 400
QLVG ++ + L
Sbjct: 275 KIPQLVGFGFIIIGVLL 291
Score = 86 (35.3 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 27/111 (24%), Positives = 55/111 (49%)
Query: 120 VLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGL--LLITFASSQGRKLPSGFNAW 177
+L++ WG + K ++ T + +FR+ A + ++I F + + R LP+ +
Sbjct: 13 LLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKKLR-LPTK-REF 70
Query: 178 VSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
IFL ++ + FL+ GL+ T+ +I+ S P+ VA+ + + E
Sbjct: 71 GLIFLASIFNIVIHHFFLSNGLKLTTGTNAGLILGSAPIVVAIFSVVFLRE 121
>UNIPROTKB|P0ABT8 [details] [associations]
symbol:yijE "predicted permease" species:83333 "Escherichia
coli K-12" [GO:0055085 "transmembrane transport" evidence=RCA]
[GO:0022857 "transmembrane transporter activity" evidence=RCA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA;RCA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR000620
Pfam:PF00892 GO:GO:0016021 GO:GO:0005886 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006810
EMBL:U00006 eggNOG:COG0697 PIR:I78664 RefSeq:NP_418378.4
RefSeq:YP_491508.1 ProteinModelPortal:P0ABT8
EnsemblBacteria:EBESCT00000004522 EnsemblBacteria:EBESCT00000017207
GeneID:12932109 GeneID:948445 KEGG:ecj:Y75_p3244 KEGG:eco:b3943
PATRIC:32123407 EchoBASE:EB1847 EcoGene:EG11902
HOGENOM:HOG000277404 OMA:EGNDTTI ProtClustDB:CLSK880819
BioCyc:EcoCyc:EG11902-MONOMER BioCyc:ECOL316407:JW5557-MONOMER
Genevestigator:P0ABT8 Uniprot:P0ABT8
Length = 301
Score = 129 (50.5 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 60/286 (20%), Positives = 111/286 (38%)
Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL-PSGFNAWVS 179
LV W + + MK+V G F A R I L+L +GR + P+ F ++
Sbjct: 15 LVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRGMRPTPFKYTLA 74
Query: 180 IFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXX 239
I AL+ G L AG +++ + P V + AAL GE
Sbjct: 75 I---ALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 131
Query: 240 XXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMV-RWVSKYS--DPVMATG 296
P + SS+ +L+ S ++ R +++ D + T
Sbjct: 132 IAAFGLFLVLQP-WQLDFSSM--KSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTS 188
Query: 297 WHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXX 356
W M+ L + V+++L V + + + AL Y++I +A+++ ++ +
Sbjct: 189 WQMLYAALVMSVVALL----VPQREI-DWQPTVFWALAYSAILATALAWSLWLFVLKNLP 243
Query: 357 XXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 402
P+ +F + LGE ++ G + V+A+ LV+
Sbjct: 244 ASIASLSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 289
>TIGR_CMR|BA_1915 [details] [associations]
symbol:BA_1915 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_844324.1 RefSeq:YP_018559.1 RefSeq:YP_028041.1
DNASU:1087054 EnsemblBacteria:EBBACT00000013050
EnsemblBacteria:EBBACT00000016903 EnsemblBacteria:EBBACT00000020730
GeneID:1087054 GeneID:2819760 GeneID:2850777 KEGG:ban:BA_1915
KEGG:bar:GBAA_1915 KEGG:bat:BAS1777 HOGENOM:HOG000088120
OMA:CLALAIC ProtClustDB:CLSK887895
BioCyc:BANT260799:GJAJ-1846-MONOMER
BioCyc:BANT261594:GJ7F-1919-MONOMER Uniprot:Q81RX2
Length = 301
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 65/290 (22%), Positives = 108/290 (37%)
Query: 120 VLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVS 179
+L F WG K L A R + G +L+ FA + ++L W
Sbjct: 12 ILTFLVFMWGINWPLSKFALHYTPPVLFAGVRTLIGGFILLLFALPKYKELHLK-ETWHL 70
Query: 180 IFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXX 239
+ +L++ F G GLQ AGL S I+ QP+ + + + + ES
Sbjct: 71 YVISSLLNIIIFYGLQTVGLQYMPAGLFSAIVFLQPVLLGIFSWIWLEESMYGLKIFGLI 130
Query: 240 XXXXXXXXXEAPAFDESNSSLWGSGEWWMLLA---AQSMAVGTVMVRWVSKYSDPVMATG 296
+ + + S+ G +LLA A A+GTV ++ + +
Sbjct: 131 LGFIGVGVISSSSLT-GHISIIG-----ILLAIGCAIGWALGTVFIKKTGHRVNSIWMVT 184
Query: 297 WHMVIGGLPLMVISVLNHDPVYGESVKELTSSD--ILALLYTSIFGSAISYGVYFYXXXX 354
++IGGL L + + ES + S + LL+ S F A+ + YF
Sbjct: 185 LQLIIGGLCL-----IGFGSEF-ESWSSIAWSMPFVSVLLFISFFVIAMGWLAYFTLVGA 238
Query: 355 XXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 404
P+ A I ++L E + +G VV+I VN +
Sbjct: 239 GEASKVGAYTFLIPLIAIIVSSIFLHEAITISLFIGLLFIVVSICFVNIK 288
>UNIPROTKB|Q47UH2 [details] [associations]
symbol:CPS_4912 "Membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0697 RefSeq:YP_271551.1
STRING:Q47UH2 GeneID:3519404 KEGG:cps:CPS_4912 PATRIC:21472621
HOGENOM:HOG000224242 OMA:LAPIWVW ProtClustDB:CLSK768097
BioCyc:CPSY167879:GI48-4913-MONOMER Uniprot:Q47UH2
Length = 298
Score = 125 (49.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 69/294 (23%), Positives = 119/294 (40%)
Query: 113 GML--LEWAVLVSP---FFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQG 167
GML L +L++P W T + EVL G FF F I +L+ S+
Sbjct: 13 GMLYSLLGVLLLTPDALILRWVT--IEHSEVLLWRGIFFSLGFSFI----VLVRHRSNAV 66
Query: 168 RKL-PSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLF 226
R L +G+ ++ F FA+ + C+ Q LQ+T A +II + P+ A++A L
Sbjct: 67 RALINAGWPGIITGFFFAM-NTYCY----TQALQQTGAATAMMIISTAPVFAALIAWLWL 121
Query: 227 GESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVS 286
GE + D+ NS L+G+ ++A + W
Sbjct: 122 GERISLPVGLTITMTLLGMAIIVSDG-DDGNS-LFGN-----MMAMGCAIFMAINFNWAR 174
Query: 287 KYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYG 346
+Y+ + G ++ GGL ++ + N SV +I A+ ++ I +
Sbjct: 175 RYASLDITPG--LIFGGLFIIALGWFN------TSVVAARPDEIGAMFLSAAIAMPIGFV 226
Query: 347 VYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL 400
+ + A I+ +L LGET S + L+G+ + +VA+ L
Sbjct: 227 LLQIAPRYISATEVSLFLLLESIIAPIWVWLGLGETPSNITLLGSVIVLVALLL 280
>TIGR_CMR|CPS_4912 [details] [associations]
symbol:CPS_4912 "membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=ISS] InterPro:IPR000620
Pfam:PF00892 GO:GO:0016020 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0697 RefSeq:YP_271551.1 STRING:Q47UH2 GeneID:3519404
KEGG:cps:CPS_4912 PATRIC:21472621 HOGENOM:HOG000224242 OMA:LAPIWVW
ProtClustDB:CLSK768097 BioCyc:CPSY167879:GI48-4913-MONOMER
Uniprot:Q47UH2
Length = 298
Score = 125 (49.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 69/294 (23%), Positives = 119/294 (40%)
Query: 113 GML--LEWAVLVSP---FFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQG 167
GML L +L++P W T + EVL G FF F I +L+ S+
Sbjct: 13 GMLYSLLGVLLLTPDALILRWVT--IEHSEVLLWRGIFFSLGFSFI----VLVRHRSNAV 66
Query: 168 RKL-PSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLF 226
R L +G+ ++ F FA+ + C+ Q LQ+T A +II + P+ A++A L
Sbjct: 67 RALINAGWPGIITGFFFAM-NTYCY----TQALQQTGAATAMMIISTAPVFAALIAWLWL 121
Query: 227 GESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVS 286
GE + D+ NS L+G+ ++A + W
Sbjct: 122 GERISLPVGLTITMTLLGMAIIVSDG-DDGNS-LFGN-----MMAMGCAIFMAINFNWAR 174
Query: 287 KYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYG 346
+Y+ + G ++ GGL ++ + N SV +I A+ ++ I +
Sbjct: 175 RYASLDITPG--LIFGGLFIIALGWFN------TSVVAARPDEIGAMFLSAAIAMPIGFV 226
Query: 347 VYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL 400
+ + A I+ +L LGET S + L+G+ + +VA+ L
Sbjct: 227 LLQIAPRYISATEVSLFLLLESIIAPIWVWLGLGETPSNITLLGSVIVLVALLL 280
>UNIPROTKB|Q88B23 [details] [associations]
symbol:PSPTO_0210 "Membrane protein, putative"
species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000620 Pfam:PF00892
GO:GO:0016020 EMBL:AE016853 GenomeReviews:AE016853_GR
eggNOG:COG0697 RefSeq:NP_790061.1 GeneID:1181818
KEGG:pst:PSPTO_0210 PATRIC:19991580 HOGENOM:HOG000219095
OMA:FLHEKIN ProtClustDB:CLSK870500
BioCyc:PSYR223283:GJIX-205-MONOMER Uniprot:Q88B23
Length = 291
Score = 123 (48.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 65/296 (21%), Positives = 115/296 (38%)
Query: 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGF 174
++ + +++ F WGT+ VA K A + R AGL + R +PS
Sbjct: 1 MIPYLYVLAAAFLWGTSFVAGKIAFGVADAPLIVLARFAMAGLFWLPVFCRSVRSVPS-- 58
Query: 175 NAWVSIFL--FALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXX 232
+ W ++ L F ++ A+ F+ GLQ TSA +++I +PL V ++ L++ E
Sbjct: 59 SRWGALLLLSFLMIPATFLLQFM--GLQYTSATSATLMIGFEPLMVMLVGWLIWREQMTA 116
Query: 233 XXXXXXXXXXXXXXXXEAPAFDESNSSLWGSGEWWM--LLAAQSMAVGTVMVRW--VSKY 288
W SG ++ LL S V + VRW +
Sbjct: 117 LHLLLGTVALAGVLLVMG----------WPSGANFLGCLLVLLSTVVVAIWVRWSKIWMQ 166
Query: 289 SDPVMA-TGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYG- 346
S V A T V+G + L+ ++ + + L++ ALLY + G ++ G
Sbjct: 167 SLSVNAFTALTTVLGTIMLIPFALF----LTNDWQVNLSTQGASALLYLGV-GCSLGAGW 221
Query: 347 VYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 402
++ P+F IF L E L G + V+ + +++
Sbjct: 222 LWNMGMRSIPANAGGMFLALEPIFGVIFAVALLYEPLGATTLAGIGLVVIPVLVIS 277
>TIGR_CMR|BA_1759 [details] [associations]
symbol:BA_1759 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000083322 RefSeq:NP_844189.1 RefSeq:YP_027897.1
RefSeq:YP_052624.1 IntAct:Q81SA6 DNASU:1086541
EnsemblBacteria:EBBACT00000009207 EnsemblBacteria:EBBACT00000015226
EnsemblBacteria:EBBACT00000021776 GeneID:1086541 GeneID:2820885
GeneID:2852628 KEGG:ban:BA_1759 KEGG:bar:GBAA_1759 KEGG:bat:BAS1631
OMA:VSTEWLV ProtClustDB:CLSK916350
BioCyc:BANT260799:GJAJ-1702-MONOMER
BioCyc:BANT261594:GJ7F-1773-MONOMER Uniprot:Q81SA6
Length = 322
Score = 112 (44.5 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 31/138 (22%), Positives = 66/138 (47%)
Query: 267 WMLLAAQSMAVGTVMVRWV-SKYSDPVMATGWHMVIGGLPLMVISVLN-HDPVYGESVKE 324
W +L+ S+A ++ + + ++S V+ GW M+IGG+ + ++ ++ + + +VK
Sbjct: 165 WGILSGLSLAFYSLYSKGLLERWSSSVIV-GWGMIIGGIGVTIVHFISTKEFILLSTVKY 223
Query: 325 LTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFS 384
+ S + + + IFG+ I++ +Y P+ A I L L F
Sbjct: 224 VKLSTLPLITFVVIFGTLIAFYLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQ 283
Query: 385 PLQLVGAAVTVVAIYLVN 402
QL+GA +V + +++
Sbjct: 284 SFQLLGAFCVIVMVLILS 301
Score = 50 (22.7 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 23/107 (21%), Positives = 44/107 (41%)
Query: 128 WGTAMVAMKEVLP--KAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAW------VS 179
WG + A +++ T ++ RL+ +G++L+ AS G F W
Sbjct: 20 WGLSGTAAQQLFQYDNISTEWLVTIRLLISGIILLIIASF-GTSKKEIFGIWKQRSDAYK 78
Query: 180 IFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLF 226
+ LF L Q ++ +A + +++ P+ + V LLF
Sbjct: 79 MILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVY--LLF 123
>UNIPROTKB|Q47X10 [details] [associations]
symbol:CPS_4003 "Membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0697 RefSeq:YP_270661.1
STRING:Q47X10 GeneID:3522261 KEGG:cps:CPS_4003 PATRIC:21470887
HOGENOM:HOG000217314 OMA:CGGIDWR ProtClustDB:CLSK2768413
BioCyc:CPSY167879:GI48-4016-MONOMER Uniprot:Q47X10
Length = 307
Score = 92 (37.4 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 120 VLVSPFFF---WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNA 176
+ PFFF +G+ V K LP + + R + AGL+L+ A G +LP+ A
Sbjct: 16 IFALPFFFVLLYGSGFVGAKLGLPHSTPLSFLSLRFMAAGLILLIIAKLIGNQLPNWREA 75
Query: 177 WVSIFLFALVDASCFQ-GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
+ I + + F G S + ++I+ QP+ VA+ A L E
Sbjct: 76 -IHISVAGSLTVCLFSVGVFVSIDMGLSPAVSALIVALQPILVALFARKLVNE 127
Score = 70 (29.7 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 320 ESVKEL-TSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLY 378
ES K + T I++L+Y + S + + + P+ A++ +L
Sbjct: 211 ESFKVVWTGEFIISLVYMVVGVSLGALSLLYIMIQRGEVSRVASVFYLVPVSAAVSAYLL 270
Query: 379 LGETFSPLQLVGAAVTVVAIYLVN 402
GET L GA++ + I+L N
Sbjct: 271 FGETIESTTLFGASIIALGIFLTN 294
>TIGR_CMR|CPS_4003 [details] [associations]
symbol:CPS_4003 "membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=ISS] InterPro:IPR000620
Pfam:PF00892 GO:GO:0016020 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0697 RefSeq:YP_270661.1 STRING:Q47X10 GeneID:3522261
KEGG:cps:CPS_4003 PATRIC:21470887 HOGENOM:HOG000217314 OMA:CGGIDWR
ProtClustDB:CLSK2768413 BioCyc:CPSY167879:GI48-4016-MONOMER
Uniprot:Q47X10
Length = 307
Score = 92 (37.4 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 120 VLVSPFFF---WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNA 176
+ PFFF +G+ V K LP + + R + AGL+L+ A G +LP+ A
Sbjct: 16 IFALPFFFVLLYGSGFVGAKLGLPHSTPLSFLSLRFMAAGLILLIIAKLIGNQLPNWREA 75
Query: 177 WVSIFLFALVDASCFQ-GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
+ I + + F G S + ++I+ QP+ VA+ A L E
Sbjct: 76 -IHISVAGSLTVCLFSVGVFVSIDMGLSPAVSALIVALQPILVALFARKLVNE 127
Score = 70 (29.7 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 320 ESVKEL-TSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLY 378
ES K + T I++L+Y + S + + + P+ A++ +L
Sbjct: 211 ESFKVVWTGEFIISLVYMVVGVSLGALSLLYIMIQRGEVSRVASVFYLVPVSAAVSAYLL 270
Query: 379 LGETFSPLQLVGAAVTVVAIYLVN 402
GET L GA++ + I+L N
Sbjct: 271 FGETIESTTLFGASIIALGIFLTN 294
>UNIPROTKB|P31125 [details] [associations]
symbol:eamA "O-acetylserine/cysteine export protein"
species:83333 "Escherichia coli K-12" [GO:0015562 "efflux
transmembrane transporter activity" evidence=IMP] [GO:0033228
"cysteine export" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA;IDA]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016021 GO:GO:0005886
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0015562 eggNOG:COG0697 GO:GO:0033228
EMBL:M96235 PIR:H64907 RefSeq:NP_416050.4 RefSeq:YP_489796.1
ProteinModelPortal:P31125 TCDB:2.A.7.3.2 PRIDE:P31125
EnsemblBacteria:EBESCT00000002443 EnsemblBacteria:EBESCT00000017587
GeneID:12930118 GeneID:946081 KEGG:ecj:Y75_p1508 KEGG:eco:b1533
PATRIC:32118364 EchoBASE:EB1594 EcoGene:EG11639
HOGENOM:HOG000184107 KO:K15268 OMA:WIILNES ProtClustDB:PRK11453
BioCyc:EcoCyc:EG11639-MONOMER BioCyc:ECOL316407:JW5250-MONOMER
Genevestigator:P31125 Uniprot:P31125
Length = 299
Score = 120 (47.3 bits), Expect = 0.00010, P = 0.00010
Identities = 61/281 (21%), Positives = 106/281 (37%)
Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPS----GFNAWVSIFLF 183
WG V +K L +A R + I F + K+P G+ +S F
Sbjct: 16 WGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARP--KVPLNLLLGYGLTISFAQF 73
Query: 184 ALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXX 243
A + C F G+ AGL S+++ +Q +L A FGE
Sbjct: 74 AFL--FCAINF---GMP---AGLASLVLQAQAFFTIMLGAFTFGERLHGKQLAGIALAIF 125
Query: 244 XXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSD-P-VMATG-WHMV 300
+ + + ++ G L AA S A G + + + +S P VM+ W +
Sbjct: 126 GVLVLIEDSLNGQHVAMLGF--MLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVIWSAL 183
Query: 301 IGGLPLMVIS-VLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXX 359
I +P V S +L+ S+ + + IL+L+Y + + + YG++
Sbjct: 184 IPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWR 243
Query: 360 XXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL 400
P+ L L E + LQ +GA + + +Y+
Sbjct: 244 VAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMTGLYI 284
>UNIPROTKB|Q4KGL8 [details] [associations]
symbol:PFL_1488 "Integral membrane protein, DUF6 family"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:CP000076 GenomeReviews:CP000076_GR eggNOG:COG0697 OMA:VMAYTYL
RefSeq:YP_258615.1 STRING:Q4KGL8 GeneID:3478326 KEGG:pfl:PFL_1488
PATRIC:19872195 BioCyc:PFLU220664:GIX8-1495-MONOMER Uniprot:Q4KGL8
Length = 302
Score = 89 (36.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 28/116 (24%), Positives = 52/116 (44%)
Query: 291 PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFY 350
P T W+M+ G L L V S+ + S L +D+L LLY ++F + ++ +
Sbjct: 184 PAAMTFWNMLFGSLFLFVASLASGG---WRSAALLRGNDLLWLLYLALFATLATFWLLHR 240
Query: 351 XXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 406
+F ++F +L+LG+ +++GA + + + L RGS
Sbjct: 241 AIGVIAPSTVISYIYLSTLFLTLFHWLWLGQGPQLTEMLGALLVALGM-LGLVRGS 295
Score = 70 (29.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 35/114 (30%), Positives = 48/114 (42%)
Query: 112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLP 171
LGMLL WAVL++ FF A EV + A RL+ + L+ + +G P
Sbjct: 11 LGMLL-WAVLIAASFF------AAAEVSQAIDPVLLTALRLLFSALMFVPLLWLKG-SAP 62
Query: 172 SGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALL 225
+ L L+ A F G L + L+ TSA + PL V A L
Sbjct: 63 MTLAGLRAHGLLGLLLALYF-GSLFEALRYTSAVNTGTLFTLVPLLTLVFEAWL 115
>TIGR_CMR|BA_0411 [details] [associations]
symbol:BA_0411 "transporter, EamA family" species:198094
"Bacillus anthracis str. Ames" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_842955.1 RefSeq:YP_017033.1 RefSeq:YP_026678.1
DNASU:1086104 EnsemblBacteria:EBBACT00000008694
EnsemblBacteria:EBBACT00000013921 EnsemblBacteria:EBBACT00000022329
GeneID:1086104 GeneID:2819583 GeneID:2853201 KEGG:ban:BA_0411
KEGG:bar:GBAA_0411 KEGG:bat:BAS0398 HOGENOM:HOG000082967
OMA:DPTVMTG ProtClustDB:CLSK915823
BioCyc:BANT260799:GJAJ-440-MONOMER
BioCyc:BANT261594:GJ7F-449-MONOMER Uniprot:Q81Z61
Length = 316
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 69/297 (23%), Positives = 108/297 (36%)
Query: 119 AVLVSPFFFWGTAMVAMK----E--VLPK-AGT-FFVAAFRLIPAGLLLITFASSQGRKL 170
A +V+ F WG+A +K E + PK G A +R +G++L+ F G+ +
Sbjct: 16 AAIVATFL-WGSAFPFIKLSYAELGIQPKEVGEQILFAGYRFFLSGVMLLFFFKLLGKDM 74
Query: 171 PSGFNAWVSIFLFALVDASCFQGFLAQ-----GLQRTSAGLGSVIIDSQPLSVAVLAALL 225
F LV FQ FL G+ +S G++I + +LA L
Sbjct: 75 --NFKKGTGK---QLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQIILAHFL 129
Query: 226 FGESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWV 285
+ + D S S +G G +L AA + G ++ +
Sbjct: 130 YKDDALNMRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKEG 189
Query: 286 SKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISY 345
SK D T + M+ G + L+ I L G + IL L+Y S F SA +
Sbjct: 190 SKTLDVGYMTAYQMIFGSIGLLCIGALQ----VGIMPFTFSVHAILMLIYLS-FLSAAGF 244
Query: 346 GVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 402
++ P+F + + LGE L G A I +VN
Sbjct: 245 CIWNTIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVN 301
>UNIPROTKB|Q4KGE1 [details] [associations]
symbol:PFL_1566 "Integral membrane protein, DUF6 family"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:CP000076 GenomeReviews:CP000076_GR eggNOG:COG0697
HOGENOM:HOG000264326 RefSeq:YP_258692.1 STRING:Q4KGE1
GeneID:3476610 KEGG:pfl:PFL_1566 PATRIC:19872355 OMA:AAHMSVF
ProtClustDB:CLSK866549 BioCyc:PFLU220664:GIX8-1575-MONOMER
Uniprot:Q4KGE1
Length = 309
Score = 103 (41.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 37/137 (27%), Positives = 66/137 (48%)
Query: 269 LLAAQSMAVGTVMVRWVSKYSD-PVMATGWH-MVIGGLPLMVISVLNHDPVYGESVK-EL 325
LLA + TV+VR S+ S+ P T ++ +++G + L++I+VL+ G+ + L
Sbjct: 166 LLAGLAWGATTVVVR-ASRLSEAPATLTLFYQLIVGFVGLLLIAVLS-----GQVTQVSL 219
Query: 326 TSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSP 385
T + ++L+ + S SY +F+ PMF FG L L E S
Sbjct: 220 TPVAVASVLFQGLVVSFFSYLTWFWLLRRYLAANLAVFSFMTPMFGVTFGVLLLDEPLSL 279
Query: 386 LQLVGAAVTVVAIYLVN 402
++GA + ++ I V+
Sbjct: 280 NFVLGAMLVLLGITFVS 296
Score = 54 (24.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 27/102 (26%), Positives = 41/102 (40%)
Query: 120 VLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRL-IPAGLLLITFASSQGRKLPSGFNAWV 178
V++ WG V +K AA R I A L+ + G S + W
Sbjct: 17 VMLGLCLIWGVQQVMIKWAAADIAPIMQAAARSGISALLVALLMCWKGGWSQVS--STWR 74
Query: 179 SIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAV 220
L + F F+A+GL+ TSA SV + + P+ A+
Sbjct: 75 GGLLAGALFGLEFL-FIAEGLKLTSAAHMSVFLYTAPIFTAL 115
>UNIPROTKB|Q5LTZ8 [details] [associations]
symbol:SPO1262 "Membrane protein, putative" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR RefSeq:YP_166507.1 GeneID:3192911
KEGG:sil:SPO1262 PATRIC:23375827 HOGENOM:HOG000121668 OMA:AFWLYLI
ProtClustDB:CLSK757166 Uniprot:Q5LTZ8
Length = 299
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 61/284 (21%), Positives = 114/284 (40%)
Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVD 187
WG+A V +++L + + +L+ + +L+ A+ + L
Sbjct: 21 WGSATVMSRDLLVSMTSIQLLLVQLMASVCVLLALAAPRFPWTYRSREMTKGALCGVLEP 80
Query: 188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXXXX 247
+ LA GL +T+AG S+I S+P+ + ++A +LF +
Sbjct: 81 GLAYVVGLA-GLAQTTAGRASIISASEPVLIVLVAWVLFNQRPGLRLMAAIAIAVGGLVL 139
Query: 248 XE-APAFDESNSSLWGSGEWWMLLAAQSMAVGTVMV--RWVSKYSDPVMATGWHMVIGGL 304
+P ++ + G M++ A A G V++ R V + +A+G MV GL
Sbjct: 140 VSWSPVVEDRGGAFRGD---MMVVLATLFAAGYVVISSRIVGSFPAASLASGQQMV--GL 194
Query: 305 PLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGS---AISYGVYFYXXXXXXXXXXX 361
++ V +G+ + + L Y ++ G A+++ +Y
Sbjct: 195 AFAML-VYAGAMAHGDDMGGFGAIPGGTLAYAALSGVVQYALAFWLYLIGLRYLSAGAAG 253
Query: 362 XXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 405
P+F +L+LGE L ++GA V V A+ L N RG
Sbjct: 254 LWLTLIPVFGLAGAWLWLGERPGLLTVLGAIVIVSAVVLGN-RG 296
>TIGR_CMR|SPO_1262 [details] [associations]
symbol:SPO_1262 "membrane protein, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR RefSeq:YP_166507.1 GeneID:3192911
KEGG:sil:SPO1262 PATRIC:23375827 HOGENOM:HOG000121668 OMA:AFWLYLI
ProtClustDB:CLSK757166 Uniprot:Q5LTZ8
Length = 299
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 61/284 (21%), Positives = 114/284 (40%)
Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVD 187
WG+A V +++L + + +L+ + +L+ A+ + L
Sbjct: 21 WGSATVMSRDLLVSMTSIQLLLVQLMASVCVLLALAAPRFPWTYRSREMTKGALCGVLEP 80
Query: 188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXXXX 247
+ LA GL +T+AG S+I S+P+ + ++A +LF +
Sbjct: 81 GLAYVVGLA-GLAQTTAGRASIISASEPVLIVLVAWVLFNQRPGLRLMAAIAIAVGGLVL 139
Query: 248 XE-APAFDESNSSLWGSGEWWMLLAAQSMAVGTVMV--RWVSKYSDPVMATGWHMVIGGL 304
+P ++ + G M++ A A G V++ R V + +A+G MV GL
Sbjct: 140 VSWSPVVEDRGGAFRGD---MMVVLATLFAAGYVVISSRIVGSFPAASLASGQQMV--GL 194
Query: 305 PLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGS---AISYGVYFYXXXXXXXXXXX 361
++ V +G+ + + L Y ++ G A+++ +Y
Sbjct: 195 AFAML-VYAGAMAHGDDMGGFGAIPGGTLAYAALSGVVQYALAFWLYLIGLRYLSAGAAG 253
Query: 362 XXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 405
P+F +L+LGE L ++GA V V A+ L N RG
Sbjct: 254 LWLTLIPVFGLAGAWLWLGERPGLLTVLGAIVIVSAVVLGN-RG 296
>UNIPROTKB|Q602U4 [details] [associations]
symbol:MCA2967 "Putative membrane protein" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:AE017282 GenomeReviews:AE017282_GR HOGENOM:HOG000220020
RefSeq:YP_115356.1 GeneID:3104107 KEGG:mca:MCA2967 PATRIC:22609824
OMA:HEHALAG ProtClustDB:CLSK711458 Uniprot:Q602U4
Length = 293
Score = 114 (45.2 bits), Expect = 0.00047, P = 0.00047
Identities = 62/285 (21%), Positives = 107/285 (37%)
Query: 122 VSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIF 181
+S W T +A+K G F R+ L ++ R++P A V +
Sbjct: 8 LSVILLWATTPLAIKWSGEGPGYLFGVTSRMAIGTLCVLLVMLMLRRRMPWHRKA-VHTY 66
Query: 182 LFALVDASCFQGFLAQ--GLQRTSAGLGSVIIDSQPLSVAVLAALLFGE-SXXXXXXXXX 238
L A + + LA Q +G SV+ PL A++AA L GE S
Sbjct: 67 LLASIQV--YGAMLAVYWASQFIPSGWISVVFGLSPLLTALMAAALLGERSLTAGKLSGY 124
Query: 239 XXXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWH 298
A + ++G +LL+A + V ++ ++ P + T
Sbjct: 125 VLGLGGLGAIFGSALELGPQGVYGIAG--VLLSAFLQCLSAVGIKRLNAKL-PALTT--- 178
Query: 299 MVIGGLPLMVISVL-NHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXX 357
V GGL + + + L V GE + L +S I A+ Y + + + +Y+Y
Sbjct: 179 -VAGGLMIALPAYLATWAAVDGEWPELLPTSSIAAIAYLGAIATTLGFALYYYVLSRLSA 237
Query: 358 XXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 402
P+ A G + E S ++VG ++A L++
Sbjct: 238 TRVAMISLISPVLALYLGHVLNDEPLS-FRIVGGTALILAALLLH 281
>UNIPROTKB|Q3A9Z5 [details] [associations]
symbol:CHY_2226 "Putative membrane protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0697
RefSeq:YP_361039.1 STRING:Q3A9Z5 GeneID:3727481 KEGG:chy:CHY_2226
PATRIC:21277519 HOGENOM:HOG000184106 OMA:AGMHILT
ProtClustDB:CLSK2396890 BioCyc:CHYD246194:GJCN-2225-MONOMER
Uniprot:Q3A9Z5
Length = 308
Score = 101 (40.6 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 27/113 (23%), Positives = 52/113 (46%)
Query: 116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFN 175
L + +LV W +A VA +EV+ + A R + +GL+++ A + + G
Sbjct: 8 LTYILLVIVAMLWASAFVAAREVVREVPPVVAATLRFLLSGLIIMPLALYREKNRRYGLK 67
Query: 176 AWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
++ + + + F G++ A S++I P+ V++LAAL E
Sbjct: 68 NYLYLVIMGFTGIFLYNLFFFFGVKFNPASDSSLVIAVNPIVVSLLAALFLKE 120
Score = 52 (23.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 18/128 (14%), Positives = 54/128 (42%)
Query: 271 AAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDI 330
A S A+ +V+ + V P+ T + + G + + + V ++ +++
Sbjct: 164 AVISWAIYSVISKKVMGTVSPLATTAFSIFFGAIFFLPWGIGEMQHV---NMLKISLKSY 220
Query: 331 LALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVG 390
L +++ ++F + +++ + P+F I ++LGE + +++G
Sbjct: 221 LLIIHLAVFPTVLAFFWWNLGIKKVGAQKSALFINLIPIFTLILSAVFLGEKITLPRVLG 280
Query: 391 AAVTVVAI 398
+ ++ +
Sbjct: 281 GLLVILGV 288
>TIGR_CMR|CHY_2226 [details] [associations]
symbol:CHY_2226 "putative membrane protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR000620 Pfam:PF00892 GO:GO:0016020 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0697 RefSeq:YP_361039.1
STRING:Q3A9Z5 GeneID:3727481 KEGG:chy:CHY_2226 PATRIC:21277519
HOGENOM:HOG000184106 OMA:AGMHILT ProtClustDB:CLSK2396890
BioCyc:CHYD246194:GJCN-2225-MONOMER Uniprot:Q3A9Z5
Length = 308
Score = 101 (40.6 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 27/113 (23%), Positives = 52/113 (46%)
Query: 116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFN 175
L + +LV W +A VA +EV+ + A R + +GL+++ A + + G
Sbjct: 8 LTYILLVIVAMLWASAFVAAREVVREVPPVVAATLRFLLSGLIIMPLALYREKNRRYGLK 67
Query: 176 AWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
++ + + + F G++ A S++I P+ V++LAAL E
Sbjct: 68 NYLYLVIMGFTGIFLYNLFFFFGVKFNPASDSSLVIAVNPIVVSLLAALFLKE 120
Score = 52 (23.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 18/128 (14%), Positives = 54/128 (42%)
Query: 271 AAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDI 330
A S A+ +V+ + V P+ T + + G + + + V ++ +++
Sbjct: 164 AVISWAIYSVISKKVMGTVSPLATTAFSIFFGAIFFLPWGIGEMQHV---NMLKISLKSY 220
Query: 331 LALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVG 390
L +++ ++F + +++ + P+F I ++LGE + +++G
Sbjct: 221 LLIIHLAVFPTVLAFFWWNLGIKKVGAQKSALFINLIPIFTLILSAVFLGEKITLPRVLG 280
Query: 391 AAVTVVAI 398
+ ++ +
Sbjct: 281 GLLVILGV 288
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 407 339 0.00094 116 3 11 22 0.49 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 621 (66 KB)
Total size of DFA: 224 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.72u 0.08s 26.80t Elapsed: 00:00:03
Total cpu time: 26.73u 0.08s 26.81t Elapsed: 00:00:03
Start: Sat May 11 00:22:01 2013 End: Sat May 11 00:22:04 2013