Query 015428
Match_columns 407
No_of_seqs 191 out of 1712
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 12:27:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015428.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015428hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2woz_A Kelch repeat and BTB do 99.2 2.4E-08 8.3E-13 93.7 27.6 209 152-384 50-293 (318)
2 3ii7_A Kelch-like protein 7; p 99.2 2.1E-08 7.2E-13 93.5 26.0 210 153-387 50-281 (306)
3 4asc_A Kelch repeat and BTB do 99.1 2E-08 6.9E-13 94.1 24.6 209 153-385 40-284 (315)
4 2vpj_A Kelch-like protein 12; 99.0 1.1E-07 3.8E-12 88.2 24.6 209 153-387 57-287 (301)
5 2xn4_A Kelch-like protein 2; s 99.0 2E-07 6.8E-12 86.6 24.7 205 155-385 58-283 (302)
6 1fs1_A SKP2 F-BOX, cyclin A/CD 99.0 2.7E-10 9.3E-15 77.1 3.6 44 63-106 7-50 (53)
7 1zgk_A Kelch-like ECH-associat 98.9 2.3E-07 7.9E-12 86.5 23.8 209 154-388 66-297 (308)
8 3ii7_A Kelch-like protein 7; p 98.9 2.8E-07 9.7E-12 85.7 23.9 202 158-387 11-234 (306)
9 2e31_A FBS1, F-box only protei 98.9 3.7E-10 1.3E-14 103.8 1.6 54 58-111 44-98 (297)
10 1zgk_A Kelch-like ECH-associat 98.8 5.9E-07 2E-11 83.8 21.6 191 172-387 39-249 (308)
11 2uvk_A YJHT; unknown function, 98.8 9E-07 3.1E-11 84.2 22.9 214 153-388 14-304 (357)
12 2vpj_A Kelch-like protein 12; 98.8 1.5E-06 5.1E-11 80.5 23.2 190 172-387 31-240 (301)
13 2xn4_A Kelch-like protein 2; s 98.7 1.4E-06 4.7E-11 80.8 21.6 191 172-387 30-238 (302)
14 4asc_A Kelch repeat and BTB do 98.7 3.7E-06 1.3E-10 78.5 23.9 192 172-387 13-230 (315)
15 2woz_A Kelch repeat and BTB do 98.6 4.9E-06 1.7E-10 77.8 20.4 191 173-387 25-240 (318)
16 2uvk_A YJHT; unknown function, 98.5 2.8E-05 9.7E-10 73.7 22.3 212 153-386 60-350 (357)
17 2zwa_A Leucine carboxyl methyl 98.4 2.7E-05 9.4E-10 80.9 23.2 211 155-385 394-642 (695)
18 2ovr_B FBW7, F-BOX/WD repeat p 98.3 0.00068 2.3E-08 65.8 27.1 47 61-107 15-61 (445)
19 3v7d_B Cell division control p 98.3 0.00078 2.7E-08 65.6 27.6 42 62-103 12-54 (464)
20 1p22_A F-BOX/WD-repeat protein 98.1 0.00021 7E-09 69.5 20.2 46 62-107 8-57 (435)
21 1k3i_A Galactose oxidase precu 98.1 6.2E-05 2.1E-09 77.7 15.5 216 154-387 249-506 (656)
22 1k3i_A Galactose oxidase precu 97.7 0.00077 2.7E-08 69.5 16.8 195 175-383 169-383 (656)
23 2zwa_A Leucine carboxyl methyl 97.7 0.00089 3E-08 69.5 16.2 149 153-316 444-616 (695)
24 2ast_B S-phase kinase-associat 97.5 5.3E-05 1.8E-09 71.1 3.4 45 62-106 6-50 (336)
25 3l2o_B F-box only protein 4; s 97.4 4.8E-05 1.6E-09 69.2 1.7 44 65-108 5-48 (312)
26 2p1m_B Transport inhibitor res 96.9 0.00022 7.5E-09 72.3 1.8 37 62-98 3-40 (594)
27 3ogk_B Coronatine-insensitive 95.8 0.0032 1.1E-07 63.6 2.5 34 66-99 14-48 (592)
28 3dsm_A Uncharacterized protein 92.1 6.9 0.00024 35.6 21.3 191 157-382 52-257 (328)
29 3q7m_A Lipoprotein YFGL, BAMB; 86.4 13 0.00046 34.1 14.1 111 260-384 47-168 (376)
30 3g4e_A Regucalcin; six bladed 85.5 19 0.00065 31.9 18.2 196 156-385 22-237 (297)
31 3v9f_A Two-component system se 83.6 43 0.0015 34.4 22.4 187 172-386 427-619 (781)
32 2bkl_A Prolyl endopeptidase; m 83.3 41 0.0014 34.0 20.6 189 171-386 201-405 (695)
33 3e5z_A Putative gluconolactona 82.2 25 0.00087 30.8 17.2 199 153-384 74-292 (296)
34 2z2n_A Virginiamycin B lyase; 81.9 25 0.00085 30.5 20.6 191 153-382 104-299 (299)
35 3q7m_A Lipoprotein YFGL, BAMB; 81.8 31 0.0011 31.5 22.9 189 154-384 99-302 (376)
36 3e5z_A Putative gluconolactona 81.5 27 0.00092 30.6 19.0 185 170-387 48-255 (296)
37 2z2n_A Virginiamycin B lyase; 77.1 35 0.0012 29.4 16.0 135 153-314 146-283 (299)
38 3dr2_A Exported gluconolactona 76.4 40 0.0014 29.8 15.9 185 170-387 65-276 (305)
39 2hqs_A Protein TOLB; TOLB, PAL 75.0 55 0.0019 30.6 19.5 197 156-387 187-396 (415)
40 2kwv_A RAD30 homolog B, DNA po 73.8 2.3 7.9E-05 26.4 2.4 27 55-81 11-37 (48)
41 3dsm_A Uncharacterized protein 72.3 55 0.0019 29.4 25.8 194 158-384 2-218 (328)
42 1nir_A Nitrite reductase; hemo 69.4 88 0.003 30.6 19.6 192 170-385 300-521 (543)
43 3bws_A Protein LP49; two-domai 67.3 77 0.0026 29.1 18.3 188 156-385 178-397 (433)
44 3no2_A Uncharacterized protein 67.1 65 0.0022 28.2 12.4 57 232-294 16-74 (276)
45 1kb0_A Quinohemoprotein alcoho 65.5 95 0.0033 31.4 14.1 117 260-384 71-205 (677)
46 1w6s_A Methanol dehydrogenase 65.1 72 0.0025 31.9 12.9 31 260-290 56-90 (599)
47 3v9f_A Two-component system se 64.7 1.3E+02 0.0044 30.7 16.3 197 156-385 371-575 (781)
48 2ad6_A Methanol dehydrogenase 62.9 1.2E+02 0.0042 29.9 14.8 116 260-384 56-191 (571)
49 1kv9_A Type II quinohemoprotei 62.2 33 0.0011 34.8 9.8 115 260-384 60-193 (668)
50 3mbr_X Glutamine cyclotransfer 60.0 87 0.003 27.2 14.4 106 263-382 27-137 (243)
51 1yiq_A Quinohemoprotein alcoho 58.1 1.6E+02 0.0055 29.7 15.1 115 260-383 64-197 (689)
52 1pjx_A Dfpase, DIISOPROPYLFLUO 57.6 95 0.0032 26.9 18.4 104 171-291 45-167 (314)
53 3azo_A Aminopeptidase; POP fam 57.2 1.5E+02 0.0052 29.2 18.9 189 172-386 161-377 (662)
54 3hfq_A Uncharacterized protein 56.2 1.1E+02 0.0037 27.1 16.3 147 230-384 17-178 (347)
55 2ghs_A AGR_C_1268P; regucalcin 56.1 1.1E+02 0.0038 27.2 19.9 195 156-386 58-268 (326)
56 4a2l_A BT_4663, two-component 54.8 1.9E+02 0.0065 29.5 23.6 198 156-385 414-621 (795)
57 3dwl_C Actin-related protein 2 54.5 74 0.0025 28.6 10.2 189 171-381 32-239 (377)
58 3nol_A Glutamine cyclotransfer 54.0 1.2E+02 0.004 26.8 12.3 106 263-382 49-159 (262)
59 3v65_B Low-density lipoprotein 51.1 1.5E+02 0.0052 27.3 17.9 138 158-324 87-230 (386)
60 1yr2_A Prolyl oligopeptidase; 50.6 2.1E+02 0.0073 28.9 20.9 162 200-386 271-449 (741)
61 4e54_B DNA damage-binding prot 50.5 1.4E+02 0.0047 27.7 11.6 101 170-288 140-243 (435)
62 2qc5_A Streptogramin B lactona 50.1 1.2E+02 0.0041 25.8 15.9 136 153-315 151-290 (300)
63 3nok_A Glutaminyl cyclase; bet 49.6 1.4E+02 0.0047 26.4 11.3 105 263-382 61-168 (268)
64 3sjl_D Methylamine dehydrogena 49.5 1.6E+02 0.0053 27.6 11.5 117 261-388 230-374 (386)
65 1w6s_A Methanol dehydrogenase 49.3 88 0.003 31.2 10.3 78 231-316 453-535 (599)
66 1flg_A Protein (quinoprotein e 49.2 2.1E+02 0.007 28.3 15.8 118 260-384 62-199 (582)
67 1flg_A Protein (quinoprotein e 48.3 92 0.0032 30.9 10.3 81 231-317 466-549 (582)
68 1nir_A Nitrite reductase; hemo 47.9 2E+02 0.007 27.9 19.9 192 157-386 147-363 (543)
69 2xdw_A Prolyl endopeptidase; a 47.7 2.3E+02 0.0078 28.4 23.3 188 172-385 208-423 (710)
70 3m0c_C LDL receptor, low-densi 47.5 2.6E+02 0.0088 28.9 19.9 135 232-384 494-639 (791)
71 1ri6_A Putative isomerase YBHE 47.0 1.4E+02 0.0049 25.8 18.1 35 353-387 280-319 (343)
72 3bws_A Protein LP49; two-domai 46.1 1.7E+02 0.006 26.6 20.4 194 158-385 133-341 (433)
73 2dg1_A DRP35, lactonase; beta 46.0 1.5E+02 0.0052 25.9 21.0 203 156-386 53-271 (333)
74 2dg1_A DRP35, lactonase; beta 45.9 1.5E+02 0.0051 26.0 10.7 50 266-316 55-106 (333)
75 1l0q_A Surface layer protein; 45.8 1.7E+02 0.0057 26.3 20.5 187 156-383 40-238 (391)
76 1qks_A Cytochrome CD1 nitrite 44.8 2.4E+02 0.0081 27.8 19.8 195 158-387 166-382 (567)
77 3u4y_A Uncharacterized protein 44.4 1.6E+02 0.0054 25.6 16.7 192 173-387 109-313 (331)
78 1l0q_A Surface layer protein; 43.0 1.8E+02 0.0063 25.9 20.9 179 170-385 94-282 (391)
79 4e54_B DNA damage-binding prot 42.4 2.1E+02 0.0071 26.4 13.1 26 358-383 410-435 (435)
80 4gga_A P55CDC, cell division c 42.3 2E+02 0.007 26.3 18.7 108 156-289 114-222 (420)
81 3dr2_A Exported gluconolactona 41.5 1.2E+02 0.0042 26.4 9.3 108 171-295 168-277 (305)
82 2fp8_A Strictosidine synthase; 41.4 1.8E+02 0.0063 25.5 12.0 120 172-316 165-302 (322)
83 2ad6_A Methanol dehydrogenase 41.3 1.4E+02 0.0049 29.3 10.5 81 231-317 444-527 (571)
84 1n7d_A LDL receptor, low-densi 41.1 2.2E+02 0.0074 28.9 12.0 109 266-385 507-621 (699)
85 3jro_A Fusion protein of prote 39.8 3.1E+02 0.011 27.7 17.9 51 232-286 78-133 (753)
86 1rwi_B Serine/threonine-protei 39.4 1.7E+02 0.0058 24.5 19.4 194 152-384 28-228 (270)
87 2fp8_A Strictosidine synthase; 38.7 2E+02 0.0069 25.2 16.2 19 369-387 260-278 (322)
88 1jmx_B Amine dehydrogenase; ox 38.5 2E+02 0.0067 25.0 18.9 25 359-384 266-290 (349)
89 1kv9_A Type II quinohemoprotei 38.0 1.6E+02 0.0056 29.5 10.4 81 231-317 438-521 (668)
90 3ott_A Two-component system se 37.3 2.3E+02 0.0079 28.7 11.6 139 153-315 477-616 (758)
91 1ri6_A Putative isomerase YBHE 37.0 2E+02 0.007 24.8 19.3 117 266-385 139-271 (343)
92 1npe_A Nidogen, entactin; glyc 36.8 1.9E+02 0.0066 24.4 23.5 192 155-385 44-246 (267)
93 1pjx_A Dfpase, DIISOPROPYLFLUO 35.1 1.5E+02 0.005 25.6 8.7 50 266-315 28-90 (314)
94 3sfz_A APAF-1, apoptotic pepti 34.9 4.5E+02 0.015 28.1 23.6 199 155-385 623-835 (1249)
95 3hfq_A Uncharacterized protein 33.7 2.4E+02 0.0083 24.7 19.4 34 353-386 289-327 (347)
96 4g56_B MGC81050 protein; prote 33.6 2.6E+02 0.0089 25.0 11.7 199 156-380 51-260 (357)
97 1evh_A WH1 domain, protein (ME 32.0 1.5E+02 0.0052 22.2 6.8 42 172-221 11-52 (112)
98 3u4y_A Uncharacterized protein 32.0 2.5E+02 0.0085 24.3 20.1 185 158-381 9-210 (331)
99 1yiq_A Quinohemoprotein alcoho 31.6 2.3E+02 0.0078 28.6 10.3 79 231-316 455-537 (689)
100 3v7d_B Cell division control p 31.5 3.1E+02 0.011 25.2 16.8 90 232-326 373-462 (464)
101 3v64_C Agrin; beta propeller, 31.1 2.9E+02 0.01 24.8 20.2 138 158-324 44-187 (349)
102 4a2l_A BT_4663, two-component 30.3 4.5E+02 0.015 26.6 22.4 203 155-385 364-578 (795)
103 4hvt_A Ritya.17583.B, post-pro 30.0 4.5E+02 0.015 26.6 17.3 117 263-386 296-437 (711)
104 3sfz_A APAF-1, apoptotic pepti 29.1 5.5E+02 0.019 27.4 14.9 177 170-382 981-1162(1249)
105 3m0c_C LDL receptor, low-densi 28.3 5.1E+02 0.017 26.7 16.1 64 261-325 561-629 (791)
106 1ddw_A GLGF-domain protein hom 28.3 1.4E+02 0.0049 22.7 6.2 40 172-221 11-51 (120)
107 1kb0_A Quinohemoprotein alcoho 26.9 3.1E+02 0.011 27.5 10.3 79 231-316 457-539 (677)
108 1ijq_A LDL receptor, low-densi 26.6 3.3E+02 0.011 24.0 18.5 58 266-324 88-148 (316)
109 2hqs_A Protein TOLB; TOLB, PAL 25.4 3.9E+02 0.014 24.4 13.6 100 171-291 290-393 (415)
110 3hrp_A Uncharacterized protein 25.0 4.1E+02 0.014 24.5 11.9 114 266-384 141-255 (409)
111 1rwi_B Serine/threonine-protei 25.0 3E+02 0.01 22.9 14.3 111 153-290 72-185 (270)
112 3ott_A Two-component system se 24.5 5.3E+02 0.018 25.9 11.7 107 266-385 73-181 (758)
113 2qc5_A Streptogramin B lactona 24.0 3.2E+02 0.011 22.9 20.3 194 152-384 24-223 (300)
114 3jrp_A Fusion protein of prote 23.4 3.7E+02 0.013 23.4 20.9 51 232-286 80-135 (379)
115 2iwa_A Glutamine cyclotransfer 23.3 3.7E+02 0.013 23.4 13.5 105 266-383 31-140 (266)
116 1got_B GT-beta; complex (GTP-b 23.3 3.8E+02 0.013 23.5 22.0 192 156-382 64-261 (340)
117 2oiz_A Aromatic amine dehydrog 23.3 4.1E+02 0.014 23.8 13.2 34 352-385 307-341 (361)
118 1egx_A VAsp, vasodilator-stimu 23.1 2.1E+02 0.0073 21.5 6.2 57 172-236 11-67 (115)
119 3tc9_A Hypothetical hydrolase; 22.7 4.7E+02 0.016 24.3 14.7 109 266-384 149-263 (430)
120 2hz6_A Endoplasmic reticulum t 22.5 54 0.0019 30.1 3.3 30 261-290 4-35 (369)
121 1n7d_A LDL receptor, low-densi 22.1 6.1E+02 0.021 25.5 11.5 64 261-325 543-611 (699)
122 1k8k_C P40, ARP2/3 complex 41 22.0 3.9E+02 0.013 23.2 19.3 109 157-287 18-129 (372)
123 3sov_A LRP-6, low-density lipo 21.8 4.2E+02 0.014 23.5 12.4 59 266-325 90-151 (318)
124 4a0p_A LRP6, LRP-6, low-densit 21.8 5.9E+02 0.02 25.2 20.2 130 172-324 15-151 (628)
No 1
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.17 E-value=2.4e-08 Score=93.67 Aligned_cols=209 Identities=11% Similarity=0.130 Sum_probs=126.9
Q ss_pred eEEeecCceEEEeeecc--------cCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEec
Q 015428 152 NIRTTCNGLVCCQSVFE--------VGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPV 223 (407)
Q Consensus 152 ~i~~s~~GLll~~~~~~--------~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~ 223 (407)
..+...+|.|++.++.. .....++++||.|++|..+|+.+..+.. . .+..++ + +|+.++..
T Consensus 50 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~-~~~~~~-------~--~iyv~GG~ 118 (318)
T 2woz_A 50 SSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL-F-GLGEVD-------D--KIYVVAGK 118 (318)
T ss_dssp EEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS-C-EEEEET-------T--EEEEEEEE
T ss_pred eEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc-c-ceEEEC-------C--EEEEEcCc
Confidence 34456677777665421 0112388999999999999987654322 1 122222 1 55666554
Q ss_pred cC-CCcceEEEEEEeCCCCcccccCCCCCCCcccccccceEEECCEEEEEec-------CCcEEEEEcCCCeEeeEe-CC
Q 015428 224 DQ-NDVSIIFFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYWTSL-------SGAILVFDLKDEQYGILP-LP 294 (407)
Q Consensus 224 ~~-~~~~~~~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~-------~~~Il~fD~~~e~~~~i~-lP 294 (407)
.. .......+++||+.+++|+.+...+.+. .....+.++|.+|.+.. ...+..||+.+.+|+.++ +|
T Consensus 119 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p 194 (318)
T 2woz_A 119 DLQTEASLDSVLCYDPVAAKWSEVKNLPIKV----YGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMK 194 (318)
T ss_dssp BTTTCCEEEEEEEEETTTTEEEEECCCSSCE----ESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCS
T ss_pred cCCCCcccceEEEEeCCCCCEeECCCCCCcc----cccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCC
Confidence 31 2334567999999999999987543321 23457779999999874 246999999999999985 33
Q ss_pred CCCCCCccEEEecCeEEEEeeeCCCc-eEEEEEc--CCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec----
Q 015428 295 ARSGPYGALTQMHGELCYMLPQIQDG-ECLIGVY--GNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL---- 367 (407)
Q Consensus 295 ~~~~~~~~l~~~~G~L~~v~~~~~~~-~w~l~~~--~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~---- 367 (407)
.. ......+..+|+|+++....... .-.++.+ ..+.|.... .++. .+ ....++..++.++++..
T Consensus 195 ~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~p~---~r---~~~~~~~~~~~i~v~GG~~~~ 265 (318)
T 2woz_A 195 TP-RSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT--EFPQ---ER---SSISLVSLAGSLYAIGGFAMI 265 (318)
T ss_dssp SC-CBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECC--CCSS---CC---BSCEEEEETTEEEEECCBCCB
T ss_pred CC-cccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECC--CCCC---cc---cceEEEEECCEEEEECCeecc
Confidence 33 22345677899999997653221 1223333 345564422 2221 11 11122234444444411
Q ss_pred -----------CCEEEEEECCCCeEEEe
Q 015428 368 -----------PNKVIAYHVKAQKMQVV 384 (407)
Q Consensus 368 -----------~~~l~~yd~~t~~~~~l 384 (407)
...+..||+++++|+++
T Consensus 266 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 266 QLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp C----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCCCceeccceeeeEEEEeCCCCEehhh
Confidence 24689999999999999
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.15 E-value=2.1e-08 Score=93.45 Aligned_cols=210 Identities=14% Similarity=0.121 Sum_probs=129.7
Q ss_pred EEeecCceEEEeeecc-cCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceE
Q 015428 153 IRTTCNGLVCCQSVFE-VGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSII 231 (407)
Q Consensus 153 i~~s~~GLll~~~~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~ 231 (407)
.+...+|.|++.++.. .....++++||.|++|..+|+.+..+.. . .+..++ + +|++++..........
T Consensus 50 ~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~-~~~~~~-------~--~iyv~GG~~~~~~~~~ 118 (306)
T 3ii7_A 50 ACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDS-L-AACAAE-------G--KIYTSGGSEVGNSALY 118 (306)
T ss_dssp EEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBS-C-EEEEET-------T--EEEEECCBBTTBSCCC
T ss_pred EEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccc-e-eEEEEC-------C--EEEEECCCCCCCcEee
Confidence 3345577777665422 1236789999999999999887654322 1 222222 1 5666655432222345
Q ss_pred EEEEEeCCCCcccccCCCCCCCcccccccceEEECCEEEEEec----------CCcEEEEEcCCCeEeeEe-CCCCCCCC
Q 015428 232 FFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYWTSL----------SGAILVFDLKDEQYGILP-LPARSGPY 300 (407)
Q Consensus 232 ~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~----------~~~Il~fD~~~e~~~~i~-lP~~~~~~ 300 (407)
.+++||+.+++|+.+...+.+. .....+.++|.+|.+.. ...+.+||+.+++|+.++ +|.. ...
T Consensus 119 ~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~ 193 (306)
T 3ii7_A 119 LFECYDTRTESWHTKPSMLTQR----CSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA-RKN 193 (306)
T ss_dssp CEEEEETTTTEEEEECCCSSCC----BSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC-CBS
T ss_pred eEEEEeCCCCceEeCCCCcCCc----ceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch-hhc
Confidence 7899999999999987654332 23456788999999864 346999999999999985 3332 224
Q ss_pred ccEEEecCeEEEEeeeCC----CceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec------CCE
Q 015428 301 GALTQMHGELCYMLPQIQ----DGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL------PNK 370 (407)
Q Consensus 301 ~~l~~~~G~L~~v~~~~~----~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~------~~~ 370 (407)
..++..+|+|+++..... .++|.. +...+.|.... .++. .. .....+..++.++++.. ...
T Consensus 194 ~~~~~~~~~i~v~GG~~~~~~~~~~~~y-d~~~~~W~~~~--~~p~---~r---~~~~~~~~~~~i~v~GG~~~~~~~~~ 264 (306)
T 3ii7_A 194 HGLVFVKDKIFAVGGQNGLGGLDNVEYY-DIKLNEWKMVS--PMPW---KG---VTVKCAAVGSIVYVLAGFQGVGRLGH 264 (306)
T ss_dssp CEEEEETTEEEEECCEETTEEBCCEEEE-ETTTTEEEECC--CCSC---CB---SCCEEEEETTEEEEEECBCSSSBCCE
T ss_pred ceEEEECCEEEEEeCCCCCCCCceEEEe-eCCCCcEEECC--CCCC---Cc---cceeEEEECCEEEEEeCcCCCeeeee
Confidence 467778999999865432 234432 22345564322 2221 10 11122234444444421 257
Q ss_pred EEEEECCCCeEEEeccc
Q 015428 371 VIAYHVKAQKMQVVSET 387 (407)
Q Consensus 371 l~~yd~~t~~~~~l~~~ 387 (407)
+..||+++++|+.+...
T Consensus 265 ~~~yd~~~~~W~~~~~~ 281 (306)
T 3ii7_A 265 ILEYNTETDKWVANSKV 281 (306)
T ss_dssp EEEEETTTTEEEEEEEE
T ss_pred EEEEcCCCCeEEeCCCc
Confidence 99999999999998754
No 3
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.13 E-value=2e-08 Score=94.09 Aligned_cols=209 Identities=12% Similarity=0.060 Sum_probs=126.3
Q ss_pred EEeecCceEEEeeecc--------cCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEecc
Q 015428 153 IRTTCNGLVCCQSVFE--------VGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVD 224 (407)
Q Consensus 153 i~~s~~GLll~~~~~~--------~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~ 224 (407)
.+...+|.|++.++.. .....++++||.|++|..+|+.+..+.. . .+..++ + +|++++...
T Consensus 40 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~-~~~~~~-------~--~lyv~GG~~ 108 (315)
T 4asc_A 40 SLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCL-F-GLGEAL-------N--SIYVVGGRE 108 (315)
T ss_dssp EEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEES-C-EEEEET-------T--EEEEECCEE
T ss_pred EEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhc-e-eEEEEC-------C--EEEEEeCCc
Confidence 3445677776655420 0113488999999999999987654321 1 122222 1 566665432
Q ss_pred C--CCcceEEEEEEeCCCCcccccCCCCCCCcccccccceEEECCEEEEEecC-------CcEEEEEcCCCeEeeEe-CC
Q 015428 225 Q--NDVSIIFFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYWTSLS-------GAILVFDLKDEQYGILP-LP 294 (407)
Q Consensus 225 ~--~~~~~~~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~~-------~~Il~fD~~~e~~~~i~-lP 294 (407)
. +......+++||..+++|+.+...+.+. .....+.++|.+|.+... ..+.+||+.+.+|+.++ +|
T Consensus 109 ~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p 184 (315)
T 4asc_A 109 IKDGERCLDSVMCYDRLSFKWGESDPLPYVV----YGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQ 184 (315)
T ss_dssp SSTTCCBCCCEEEEETTTTEEEECCCCSSCC----BSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCS
T ss_pred CCCCCcccceEEEECCCCCcEeECCCCCCcc----cceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCC
Confidence 1 1234457899999999999987654332 234678899999998752 47999999999999885 34
Q ss_pred CCCCCCccEEEecCeEEEEeeeCCCc-eEEEEEcC--CccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec----
Q 015428 295 ARSGPYGALTQMHGELCYMLPQIQDG-ECLIGVYG--NLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL---- 367 (407)
Q Consensus 295 ~~~~~~~~l~~~~G~L~~v~~~~~~~-~w~l~~~~--~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~---- 367 (407)
.. ......+..+|+|+++....... .=.++.++ .+.|.. .-.++. .+ .....+..++.++++..
T Consensus 185 ~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~--~~~~p~---~r---~~~~~~~~~~~l~v~GG~~~~ 255 (315)
T 4asc_A 185 TA-RSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAP--FEAFPQ---ER---SSLSLVSLVGTLYAIGGFATL 255 (315)
T ss_dssp SC-CBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEE--ECCCSS---CC---BSCEEEEETTEEEEEEEEEEE
T ss_pred Cc-hhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEE--CCCCCC---cc---cceeEEEECCEEEEECCcccc
Confidence 33 22346777899999997754321 11233333 345533 222221 11 11122233444444321
Q ss_pred -----------CCEEEEEECCCCeEEEec
Q 015428 368 -----------PNKVIAYHVKAQKMQVVS 385 (407)
Q Consensus 368 -----------~~~l~~yd~~t~~~~~l~ 385 (407)
-..+..||+++++|+.+.
T Consensus 256 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 284 (315)
T 4asc_A 256 ETESGELVPTELNDIWRYNEEEKKWEGVL 284 (315)
T ss_dssp ECTTSCEEEEEEEEEEEEETTTTEEEEEE
T ss_pred CcCCccccccccCcEEEecCCCChhhhhc
Confidence 135889999999999994
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.02 E-value=1.1e-07 Score=88.22 Aligned_cols=209 Identities=8% Similarity=0.033 Sum_probs=128.1
Q ss_pred EEeecCceEEEeeecc--cCCeEEEEEcCcccc---eeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCC
Q 015428 153 IRTTCNGLVCCQSVFE--VGNFFYYICNPVTKE---WHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQND 227 (407)
Q Consensus 153 i~~s~~GLll~~~~~~--~~~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~ 227 (407)
.....+|.+++.++.. .....++++||.|++ |..+|+.+..+... .+..++ + +|+.++.... .
T Consensus 57 ~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~--~~~~~~-------~--~lyv~GG~~~-~ 124 (301)
T 2vpj_A 57 ASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA--GATTLG-------D--MIYVSGGFDG-S 124 (301)
T ss_dssp EEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC--EEEEET-------T--EEEEECCBCS-S
T ss_pred cEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce--eEEEEC-------C--EEEEEcccCC-C
Confidence 3344567776655421 122568999999999 99998876543221 222222 1 5666654431 2
Q ss_pred cceEEEEEEeCCCCcccccCCCCCCCcccccccceEEECCEEEEEec------CCcEEEEEcCCCeEeeEe-CCCCCCCC
Q 015428 228 VSIIFFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYWTSL------SGAILVFDLKDEQYGILP-LPARSGPY 300 (407)
Q Consensus 228 ~~~~~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~------~~~Il~fD~~~e~~~~i~-lP~~~~~~ 300 (407)
.....+++||..+++|+.+...+.+. .....+.++|.+|.+.. ...+.+||+.+.+|+.+. +|.. ...
T Consensus 125 ~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~ 199 (301)
T 2vpj_A 125 RRHTSMERYDPNIDQWSMLGDMQTAR----EGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK-RSG 199 (301)
T ss_dssp CBCCEEEEEETTTTEEEEEEECSSCC----BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC-CBS
T ss_pred cccceEEEEcCCCCeEEECCCCCCCc----ccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc-ccc
Confidence 22457999999999999987543322 23457788999999864 257999999999999985 3333 224
Q ss_pred ccEEEecCeEEEEeeeCC----CceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec--C----CE
Q 015428 301 GALTQMHGELCYMLPQIQ----DGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL--P----NK 370 (407)
Q Consensus 301 ~~l~~~~G~L~~v~~~~~----~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~--~----~~ 370 (407)
..++..+|+|+++..... .++|.. +...+.|... -.++. .+ .....+..++.++++.. + ..
T Consensus 200 ~~~~~~~~~i~v~GG~~~~~~~~~v~~y-d~~~~~W~~~--~~~p~---~r---~~~~~~~~~~~i~v~GG~~~~~~~~~ 270 (301)
T 2vpj_A 200 AGVALLNDHIYVVGGFDGTAHLSSVEAY-NIRTDSWTTV--TSMTT---PR---CYVGATVLRGRLYAIAGYDGNSLLSS 270 (301)
T ss_dssp CEEEEETTEEEEECCBCSSSBCCCEEEE-ETTTTEEEEE--CCCSS---CC---BSCEEEEETTEEEEECCBCSSSBEEE
T ss_pred ceEEEECCEEEEEeCCCCCcccceEEEE-eCCCCcEEEC--CCCCC---cc---cceeEEEECCEEEEEcCcCCCccccc
Confidence 467778999999876532 234443 2334556432 22221 11 11122234444444421 1 46
Q ss_pred EEEEECCCCeEEEeccc
Q 015428 371 VIAYHVKAQKMQVVSET 387 (407)
Q Consensus 371 l~~yd~~t~~~~~l~~~ 387 (407)
+..||+++++|+.+...
T Consensus 271 v~~yd~~~~~W~~~~~~ 287 (301)
T 2vpj_A 271 IECYDPIIDSWEVVTSM 287 (301)
T ss_dssp EEEEETTTTEEEEEEEE
T ss_pred EEEEcCCCCeEEEcCCC
Confidence 89999999999998654
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.98 E-value=2e-07 Score=86.57 Aligned_cols=205 Identities=13% Similarity=0.114 Sum_probs=126.9
Q ss_pred eecCceEEEeeecc--cCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEE
Q 015428 155 TTCNGLVCCQSVFE--VGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIF 232 (407)
Q Consensus 155 ~s~~GLll~~~~~~--~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~ 232 (407)
...+|.|++.++.. .....++++||.|++|..+|+.+..+.. . .+..++ + +|+.++.... ......
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~-~~~~~~-------~--~iyv~GG~~~-~~~~~~ 125 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST-L-GAAVLN-------G--LLYAVGGFDG-STGLSS 125 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-C-EEEEET-------T--EEEEEEEECS-SCEEEE
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc-e-EEEEEC-------C--EEEEEcCCCC-CccCce
Confidence 34577777665421 1125688999999999999987654322 1 222222 2 4555554421 234467
Q ss_pred EEEEeCCCCcccccCCCCCCCcccccccceEEECCEEEEEec--------CCcEEEEEcCCCeEeeEe-CCCCCCCCccE
Q 015428 233 FEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYWTSL--------SGAILVFDLKDEQYGILP-LPARSGPYGAL 303 (407)
Q Consensus 233 ~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~--------~~~Il~fD~~~e~~~~i~-lP~~~~~~~~l 303 (407)
+++||..++.|+.+...+.+. .....+.++|.+|.+.. ...+..||+.+++|+.+. +|.. .....+
T Consensus 126 ~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~ 200 (302)
T 2xn4_A 126 VEAYNIKSNEWFHVAPMNTRR----SSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR-RSGAGV 200 (302)
T ss_dssp EEEEETTTTEEEEECCCSSCC----BSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC-CBSCEE
T ss_pred EEEEeCCCCeEeecCCCCCcc----cCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc-cccccE
Confidence 999999999999987554322 23456788999999864 246999999999999985 3333 223467
Q ss_pred EEecCeEEEEeeeCC----CceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec------CCEEEE
Q 015428 304 TQMHGELCYMLPQIQ----DGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL------PNKVIA 373 (407)
Q Consensus 304 ~~~~G~L~~v~~~~~----~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~------~~~l~~ 373 (407)
+..+|+|+++..... .++|.. +...+.|.... .++. .+ ....++..++.++++.. -..+..
T Consensus 201 ~~~~~~iyv~GG~~~~~~~~~~~~y-d~~~~~W~~~~--~~~~---~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v~~ 271 (302)
T 2xn4_A 201 GVLNNLLYAVGGHDGPLVRKSVEVY-DPTTNAWRQVA--DMNM---CR---RNAGVCAVNGLLYVVGGDDGSCNLASVEY 271 (302)
T ss_dssp EEETTEEEEECCBSSSSBCCCEEEE-ETTTTEEEEEC--CCSS---CC---BSCEEEEETTEEEEECCBCSSSBCCCEEE
T ss_pred EEECCEEEEECCCCCCcccceEEEE-eCCCCCEeeCC--CCCC---cc---ccCeEEEECCEEEEECCcCCCcccccEEE
Confidence 778999999976432 244443 23345564322 2221 11 11122334544444421 145999
Q ss_pred EECCCCeEEEec
Q 015428 374 YHVKAQKMQVVS 385 (407)
Q Consensus 374 yd~~t~~~~~l~ 385 (407)
||+++++|+.+.
T Consensus 272 yd~~~~~W~~~~ 283 (302)
T 2xn4_A 272 YNPTTDKWTVVS 283 (302)
T ss_dssp EETTTTEEEECS
T ss_pred EcCCCCeEEECC
Confidence 999999999986
No 6
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.98 E-value=2.7e-10 Score=77.14 Aligned_cols=44 Identities=23% Similarity=0.228 Sum_probs=39.2
Q ss_pred ccCCCCchHHHHHhcCCCCchhhhhhhcccHhhhhhhcCCcccc
Q 015428 63 KKNIGLSDVTMEHVLPFLPAKSLCRFKAVSKEWNRWISSPFLAH 106 (407)
Q Consensus 63 ~~~~~Lpd~lle~IL~rLP~~sl~r~r~VCK~Wr~li~sp~F~~ 106 (407)
..|..||++++.+||++||++++.++++|||+|+.++.++.|.+
T Consensus 7 ~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp --CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 36789999999999999999999999999999999999988764
No 7
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.95 E-value=2.3e-07 Score=86.54 Aligned_cols=209 Identities=9% Similarity=0.095 Sum_probs=127.8
Q ss_pred EeecCceEEEeeecc------cCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCC
Q 015428 154 RTTCNGLVCCQSVFE------VGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQND 227 (407)
Q Consensus 154 ~~s~~GLll~~~~~~------~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~ 227 (407)
+...+|.|++.++.. .....++++||.|++|..+|+.+..+.. . .+..++ + +|++++.... .
T Consensus 66 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~-~~~~~~-------~--~iyv~GG~~~-~ 133 (308)
T 1zgk_A 66 GCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNR-I-GVGVID-------G--HIYAVGGSHG-C 133 (308)
T ss_dssp EEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBT-C-EEEEET-------T--EEEEECCEET-T
T ss_pred EEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccc-c-EEEEEC-------C--EEEEEcCCCC-C
Confidence 345577777665420 1124588999999999999987654322 1 222222 1 5666654321 1
Q ss_pred cceEEEEEEeCCCCcccccCCCCCCCcccccccceEEECCEEEEEec------CCcEEEEEcCCCeEeeEe-CCCCCCCC
Q 015428 228 VSIIFFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYWTSL------SGAILVFDLKDEQYGILP-LPARSGPY 300 (407)
Q Consensus 228 ~~~~~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~------~~~Il~fD~~~e~~~~i~-lP~~~~~~ 300 (407)
.....+++||..+++|+.+...+.+. .....+.++|.+|.+.. ...+..||+.+++|..++ +|.. ...
T Consensus 134 ~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~ 208 (308)
T 1zgk_A 134 IHHNSVERYEPERDEWHLVAPMLTRR----IGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTI-RSG 208 (308)
T ss_dssp EECCCEEEEETTTTEEEECCCCSSCC----BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSC-CBS
T ss_pred cccccEEEECCCCCeEeECCCCCccc----cceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCc-ccc
Confidence 12346899999999999987544322 23467788999999864 257999999999999885 3332 223
Q ss_pred ccEEEecCeEEEEeeeCC----CceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEe------cCCE
Q 015428 301 GALTQMHGELCYMLPQIQ----DGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIIL------LPNK 370 (407)
Q Consensus 301 ~~l~~~~G~L~~v~~~~~----~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~------~~~~ 370 (407)
...+..+|+|+++..... .++|.. +.....|.... .++. .+ .....+..++.++++. ....
T Consensus 209 ~~~~~~~~~iyv~GG~~~~~~~~~v~~y-d~~~~~W~~~~--~~p~---~r---~~~~~~~~~~~i~v~GG~~~~~~~~~ 279 (308)
T 1zgk_A 209 AGVCVLHNCIYAAGGYDGQDQLNSVERY-DVETETWTFVA--PMKH---RR---SALGITVHQGRIYVLGGYDGHTFLDS 279 (308)
T ss_dssp CEEEEETTEEEEECCBCSSSBCCCEEEE-ETTTTEEEECC--CCSS---CC---BSCEEEEETTEEEEECCBCSSCBCCE
T ss_pred ceEEEECCEEEEEeCCCCCCccceEEEE-eCCCCcEEECC--CCCC---Cc---cceEEEEECCEEEEEcCcCCCcccce
Confidence 456777999999875432 344443 23345564322 2221 11 1112223454444442 1256
Q ss_pred EEEEECCCCeEEEecccC
Q 015428 371 VIAYHVKAQKMQVVSETG 388 (407)
Q Consensus 371 l~~yd~~t~~~~~l~~~~ 388 (407)
+..||+++++|+.+....
T Consensus 280 v~~yd~~~~~W~~~~~~p 297 (308)
T 1zgk_A 280 VECYDPDTDTWSEVTRMT 297 (308)
T ss_dssp EEEEETTTTEEEEEEECS
T ss_pred EEEEcCCCCEEeecCCCC
Confidence 999999999999997653
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.94 E-value=2.8e-07 Score=85.71 Aligned_cols=202 Identities=13% Similarity=0.074 Sum_probs=122.3
Q ss_pred CceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEe
Q 015428 158 NGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYS 237 (407)
Q Consensus 158 ~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~ 237 (407)
.+.|++.++. .....++++||.|++|..+++.+..+.. . .+..++ + +|+.++... ......+++|+
T Consensus 11 ~~~l~~~GG~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~-~~~~~~-------~--~lyv~GG~~--~~~~~~~~~~d 76 (306)
T 3ii7_A 11 HDYRIALFGG-SQPQSCRYFNPKDYSWTDIRCPFEKRRD-A-ACVFWD-------N--VVYILGGSQ--LFPIKRMDCYN 76 (306)
T ss_dssp CCEEEEEECC-SSTTSEEEEETTTTEEEECCCCSCCCBS-C-EEEEET-------T--EEEEECCBS--SSBCCEEEEEE
T ss_pred cceEEEEeCC-CCCceEEEecCCCCCEecCCCCCcccce-e-EEEEEC-------C--EEEEEeCCC--CCCcceEEEEe
Confidence 3444444332 1145688999999999999987654322 1 222222 1 455555432 23345789999
Q ss_pred CCCCcccccCCCCCCCcccccccceEEECCEEEEEecC-------CcEEEEEcCCCeEeeEe-CCCCCCCCccEEEecCe
Q 015428 238 SRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYWTSLS-------GAILVFDLKDEQYGILP-LPARSGPYGALTQMHGE 309 (407)
Q Consensus 238 s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~~-------~~Il~fD~~~e~~~~i~-lP~~~~~~~~l~~~~G~ 309 (407)
..+++|+.+...+.+. .....+.++|.+|.+... ..+..||+.+.+|..++ +|.. ......+..+|+
T Consensus 77 ~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~ 151 (306)
T 3ii7_A 77 VVKDSWYSKLGPPTPR----DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ-RCSHGMVEANGL 151 (306)
T ss_dssp TTTTEEEEEECCSSCC----BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTE
T ss_pred CCCCeEEECCCCCccc----cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC-cceeEEEEECCE
Confidence 9999999987544322 234667889999998641 46999999999999984 3433 234466778999
Q ss_pred EEEEeeeCC--------CceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEe--c----CCEEEEEE
Q 015428 310 LCYMLPQIQ--------DGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIIL--L----PNKVIAYH 375 (407)
Q Consensus 310 L~~v~~~~~--------~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~--~----~~~l~~yd 375 (407)
|+++..... .++|.. +.....|... -.++. .. .....+..++.++++. . ...+..||
T Consensus 152 iyv~GG~~~~~~~~~~~~~~~~y-d~~~~~W~~~--~~~p~---~r---~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd 222 (306)
T 3ii7_A 152 IYVCGGSLGNNVSGRVLNSCEVY-DPATETWTEL--CPMIE---AR---KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYD 222 (306)
T ss_dssp EEEECCEESCTTTCEECCCEEEE-ETTTTEEEEE--CCCSS---CC---BSCEEEEETTEEEEECCEETTEEBCCEEEEE
T ss_pred EEEECCCCCCCCcccccceEEEe-CCCCCeEEEC--CCccc---hh---hcceEEEECCEEEEEeCCCCCCCCceEEEee
Confidence 999875421 223332 2234555432 22221 11 1112222344444431 1 25699999
Q ss_pred CCCCeEEEeccc
Q 015428 376 VKAQKMQVVSET 387 (407)
Q Consensus 376 ~~t~~~~~l~~~ 387 (407)
+++++|+.+...
T Consensus 223 ~~~~~W~~~~~~ 234 (306)
T 3ii7_A 223 IKLNEWKMVSPM 234 (306)
T ss_dssp TTTTEEEECCCC
T ss_pred CCCCcEEECCCC
Confidence 999999999754
No 9
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.87 E-value=3.7e-10 Score=103.80 Aligned_cols=54 Identities=20% Similarity=0.252 Sum_probs=45.7
Q ss_pred CccccccCCCCchHHHHHhcCCCCchhhh-hhhcccHhhhhhhcCCccccccccc
Q 015428 58 GLVKLKKNIGLSDVTMEHVLPFLPAKSLC-RFKAVSKEWNRWISSPFLAHLQTTH 111 (407)
Q Consensus 58 ~~~~~~~~~~Lpd~lle~IL~rLP~~sl~-r~r~VCK~Wr~li~sp~F~~~~~~~ 111 (407)
+.+.+.....||++|+++||+|||+++|+ ||++|||+|+.+|+++.|.+.+..+
T Consensus 44 ~~~~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~ 98 (297)
T 2e31_A 44 EAEAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQ 98 (297)
T ss_dssp ---CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHH
T ss_pred ccccccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhc
Confidence 34444567799999999999999999999 9999999999999999999876543
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.82 E-value=5.9e-07 Score=83.76 Aligned_cols=191 Identities=9% Similarity=0.083 Sum_probs=116.5
Q ss_pred eEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEecc---CCCcceEEEEEEeCCCCcccccCC
Q 015428 172 FFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVD---QNDVSIIFFEIYSSRSRSWRTTDT 248 (407)
Q Consensus 172 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~---~~~~~~~~~~vy~s~t~~W~~~~~ 248 (407)
..++++||.|++|..++..+..+.. . .+...+ + +|+.++... ........+++||..+++|+.+..
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~-~-~~~~~~-------~--~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 107 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSG-L-AGCVVG-------G--LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAP 107 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBS-C-EEEEET-------T--EEEEECCEEEETTEEEECCCEEEEETTTTEEEECCC
T ss_pred ceEEEEcCCCCeEeECCCCCccccc-c-eEEEEC-------C--EEEEECCCcCCCCCCeecceEEEECCCCCeEeECCC
Confidence 4688999999999999876654322 1 111222 1 455554331 001122468999999999999875
Q ss_pred CCCCCcccccccceEEECCEEEEEec------CCcEEEEEcCCCeEeeEe-CCCCCCCCccEEEecCeEEEEeeeCC---
Q 015428 249 ICSEPDVLKLSINGFYMKGFVYWTSL------SGAILVFDLKDEQYGILP-LPARSGPYGALTQMHGELCYMLPQIQ--- 318 (407)
Q Consensus 249 ~~~~~~~~~~~~~~v~~~G~lYwl~~------~~~Il~fD~~~e~~~~i~-lP~~~~~~~~l~~~~G~L~~v~~~~~--- 318 (407)
.+.+. .....+.++|.+|.+.. ...+..||+.+.+|+.++ +|... .....+..+|+|+++.....
T Consensus 108 ~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~ 182 (308)
T 1zgk_A 108 MSVPR----NRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRR-IGVGVAVLNRLLYAVGGFDGTNR 182 (308)
T ss_dssp CSSCC----BTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCC-BSCEEEEETTEEEEECCBCSSCB
T ss_pred CCcCc----cccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccc-cceEEEEECCEEEEEeCCCCCCc
Confidence 54322 23456778999999864 257999999999999884 44332 23456677999999876432
Q ss_pred -CceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec------CCEEEEEECCCCeEEEeccc
Q 015428 319 -DGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL------PNKVIAYHVKAQKMQVVSET 387 (407)
Q Consensus 319 -~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~------~~~l~~yd~~t~~~~~l~~~ 387 (407)
.++|.. +.....|.... .++. .+ .....+..++.++++.. ...+..||+++++|+.+...
T Consensus 183 ~~~~~~y-d~~~~~W~~~~--~~p~---~r---~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 249 (308)
T 1zgk_A 183 LNSAECY-YPERNEWRMIT--AMNT---IR---SGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM 249 (308)
T ss_dssp CCCEEEE-ETTTTEEEECC--CCSS---CC---BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC
T ss_pred CceEEEE-eCCCCeEeeCC--CCCC---cc---ccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCC
Confidence 234443 23345564322 2221 11 11122234444444421 25699999999999998754
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.81 E-value=9e-07 Score=84.18 Aligned_cols=214 Identities=13% Similarity=0.063 Sum_probs=123.5
Q ss_pred EEeecCceEEEeeecccCCeEEEEEcCc--ccceeecCCCC-cCCCCcceEEEEecCCCCCCCCCeEEEEEEeccC--C-
Q 015428 153 IRTTCNGLVCCQSVFEVGNFFYYICNPV--TKEWHVLPQPK-FFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQ--N- 226 (407)
Q Consensus 153 i~~s~~GLll~~~~~~~~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~--~- 226 (407)
.....+|.|.+.++. ....++++||. +++|..+|+.+ ..+. .. .+..++ + +|+.++.... .
T Consensus 14 ~~~~~~~~iyv~GG~--~~~~~~~~d~~~~~~~W~~~~~~p~~~R~-~~-~~~~~~-------~--~lyv~GG~~~~~~~ 80 (357)
T 2uvk_A 14 TGAIDNDTVYIGLGS--AGTAWYKLDTQAKDKKWTALAAFPGGPRD-QA-TSAFID-------G--NLYVFGGIGKNSEG 80 (357)
T ss_dssp EEEEETTEEEEECGG--GTTCEEEEETTSSSCCEEECCCCTTCCCB-SC-EEEEET-------T--EEEEECCEEECTTS
T ss_pred EEEEECCEEEEEeCc--CCCeEEEEccccCCCCeeECCCCCCCcCc-cc-eEEEEC-------C--EEEEEcCCCCCCCc
Confidence 344458888776653 33468899998 59999999866 3331 12 222222 1 4555554311 0
Q ss_pred -CcceEEEEEEeCCCCcccccCCCCCCCcccccccceEEECCEEEEEecC------------------------------
Q 015428 227 -DVSIIFFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYWTSLS------------------------------ 275 (407)
Q Consensus 227 -~~~~~~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~~------------------------------ 275 (407)
......+++||..+++|+.+...+ +... .....+.++|.+|.+...
T Consensus 81 ~~~~~~~v~~yd~~~~~W~~~~~~~-p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (357)
T 2uvk_A 81 LTQVFNDVHKYNPKTNSWVKLMSHA-PMGM--AGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYF 157 (357)
T ss_dssp CEEECCCEEEEETTTTEEEECSCCC-SSCC--SSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cceeeccEEEEeCCCCcEEECCCCC-Cccc--ccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhc
Confidence 112346899999999999987654 1111 233467799999998752
Q ss_pred ----------CcEEEEEcCCCeEeeEe-CCCCCCCCccEEEecCeEEEEeeeC-----CCceEEEEE-cCCccceeeEee
Q 015428 276 ----------GAILVFDLKDEQYGILP-LPARSGPYGALTQMHGELCYMLPQI-----QDGECLIGV-YGNLDMSLKCVI 338 (407)
Q Consensus 276 ----------~~Il~fD~~~e~~~~i~-lP~~~~~~~~l~~~~G~L~~v~~~~-----~~~~w~l~~-~~~~~W~~~~~i 338 (407)
..+.+||+.+.+|+.+. +|........++..+|+|+++.... ..++|...- -....|....
T Consensus 158 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~-- 235 (357)
T 2uvk_A 158 DKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLA-- 235 (357)
T ss_dssp SSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECC--
T ss_pred cccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecC--
Confidence 47999999999999884 5543333356778899999986532 235555431 1335564322
Q ss_pred eeecccccCcCCcceEEEeecCCEEEEec--C---------------------CEEEEEECCCCeEEEecccC
Q 015428 339 PVEHEVLGETFSDCRVLTCVNSDILIILL--P---------------------NKVIAYHVKAQKMQVVSETG 388 (407)
Q Consensus 339 ~l~~~~~~~~~~~~~~~~~~~g~~lll~~--~---------------------~~l~~yd~~t~~~~~l~~~~ 388 (407)
.++.. .+ ......+..++.++++.. . ..+..||+++++|+.+....
T Consensus 236 ~~~~~-~~---~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p 304 (357)
T 2uvk_A 236 PVSSP-DG---VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELS 304 (357)
T ss_dssp CSSTT-TC---CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECS
T ss_pred CCCCC-cc---cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCC
Confidence 22110 00 001112234444444321 0 24789999999999997543
No 12
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.79 E-value=1.5e-06 Score=80.51 Aligned_cols=190 Identities=12% Similarity=0.107 Sum_probs=117.7
Q ss_pred eEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCc---ccccCC
Q 015428 172 FFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRS---WRTTDT 248 (407)
Q Consensus 172 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~---W~~~~~ 248 (407)
..++++||.|++|..+|..+..+.. . .+...+ + +|+.++... +......+++|+..++. |+.+..
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~-~-~~~~~~-------~--~l~v~GG~~-~~~~~~~~~~~d~~~~~~~~W~~~~~ 98 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRY-V-ASVSLH-------D--RIYVIGGYD-GRSRLSSVECLDYTADEDGVWYSVAP 98 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBS-C-EEEEET-------T--EEEEECCBC-SSCBCCCEEEEETTCCTTCCCEEECC
T ss_pred eEEEEEcCCCCeEEeCCCCChhhcc-c-cEEEEC-------C--EEEEEcCCC-CCccCceEEEEECCCCCCCeeEECCC
Confidence 4688999999999999976653321 1 222222 1 556555432 12233468999999999 999875
Q ss_pred CCCCCcccccccceEEECCEEEEEec------CCcEEEEEcCCCeEeeEe-CCCCCCCCccEEEecCeEEEEeeeCC---
Q 015428 249 ICSEPDVLKLSINGFYMKGFVYWTSL------SGAILVFDLKDEQYGILP-LPARSGPYGALTQMHGELCYMLPQIQ--- 318 (407)
Q Consensus 249 ~~~~~~~~~~~~~~v~~~G~lYwl~~------~~~Il~fD~~~e~~~~i~-lP~~~~~~~~l~~~~G~L~~v~~~~~--- 318 (407)
.+.+. .....+.++|.+|.+.. ...+..||+.+.+|+.++ +|... .....+..+|+|+++.....
T Consensus 99 ~p~~r----~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~ 173 (301)
T 2vpj_A 99 MNVRR----GLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAR-EGAGLVVASGVIYCLGGYDGLNI 173 (301)
T ss_dssp CSSCC----BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC-BSCEEEEETTEEEEECCBCSSCB
T ss_pred CCCCc----cceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCc-ccceEEEECCEEEEECCCCCCcc
Confidence 44322 23467788999999874 246999999999999885 44332 23456777999999875432
Q ss_pred -CceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec------CCEEEEEECCCCeEEEeccc
Q 015428 319 -DGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL------PNKVIAYHVKAQKMQVVSET 387 (407)
Q Consensus 319 -~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~------~~~l~~yd~~t~~~~~l~~~ 387 (407)
.++|.. +.....|... -.++. .. .....+..++.++++.. ...+..||+++++|+.+...
T Consensus 174 ~~~~~~~-d~~~~~W~~~--~~~p~---~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 240 (301)
T 2vpj_A 174 LNSVEKY-DPHTGHWTNV--TPMAT---KR---SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM 240 (301)
T ss_dssp CCCEEEE-ETTTTEEEEE--CCCSS---CC---BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred cceEEEE-eCCCCcEEeC--CCCCc---cc---ccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC
Confidence 234433 2234555432 22221 10 11122234444444421 24699999999999999754
No 13
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.75 E-value=1.4e-06 Score=80.83 Aligned_cols=191 Identities=7% Similarity=0.039 Sum_probs=116.9
Q ss_pred eEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCcccccCCCCC
Q 015428 172 FFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRSWRTTDTICS 251 (407)
Q Consensus 172 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~~ 251 (407)
..+.++||.+++|..++..+..+.. . .+..++ . +|+.++.... ......+++||..+++|+.+...+.
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~-~-~~~~~~--------~-~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~ 97 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCR-A-GMVYMA--------G-LVFAVGGFNG-SLRVRTVDSYDPVKDQWTSVANMRD 97 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBS-C-EEEEET--------T-EEEEESCBCS-SSBCCCEEEEETTTTEEEEECCCSS
T ss_pred CcEEEEcCcCCcEeEcccCCccccc-c-eEEEEC--------C-EEEEEeCcCC-CccccceEEECCCCCceeeCCCCCc
Confidence 4578999999999999876654321 1 112222 1 4555554321 2233468999999999999876543
Q ss_pred CCcccccccceEEECCEEEEEecC------CcEEEEEcCCCeEeeEeCCCCCCCCccEEEecCeEEEEeeeCC------C
Q 015428 252 EPDVLKLSINGFYMKGFVYWTSLS------GAILVFDLKDEQYGILPLPARSGPYGALTQMHGELCYMLPQIQ------D 319 (407)
Q Consensus 252 ~~~~~~~~~~~v~~~G~lYwl~~~------~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~~G~L~~v~~~~~------~ 319 (407)
+. .....+.++|.+|.+... ..+..||+.+.+|+.++-.+........+..+|+|+++..... .
T Consensus 98 ~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 173 (302)
T 2xn4_A 98 RR----STLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLS 173 (302)
T ss_dssp CC----BSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECC
T ss_pred cc----cceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCcccc
Confidence 22 234677789999998741 3688999999999998532222223456778999999875421 2
Q ss_pred ceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec------CCEEEEEECCCCeEEEeccc
Q 015428 320 GECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL------PNKVIAYHVKAQKMQVVSET 387 (407)
Q Consensus 320 ~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~------~~~l~~yd~~t~~~~~l~~~ 387 (407)
++|.. +...+.|... -.++. .. .....+..++.++++.. ...+..||+++++|+.+...
T Consensus 174 ~~~~y-d~~~~~W~~~--~~~p~---~r---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 238 (302)
T 2xn4_A 174 TVECY-NATTNEWTYI--AEMST---RR---SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADM 238 (302)
T ss_dssp CEEEE-ETTTTEEEEE--CCCSS---CC---BSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCC
T ss_pred EEEEE-eCCCCcEEEC--CCCcc---cc---ccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCC
Confidence 34432 2334556432 22221 11 11122234444444421 24699999999999999754
No 14
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.73 E-value=3.7e-06 Score=78.51 Aligned_cols=192 Identities=11% Similarity=0.054 Sum_probs=112.8
Q ss_pred eEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEecc-----CCCcceEEEEEEeCCCCccccc
Q 015428 172 FFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVD-----QNDVSIIFFEIYSSRSRSWRTT 246 (407)
Q Consensus 172 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~-----~~~~~~~~~~vy~s~t~~W~~~ 246 (407)
..++++||.|++|.. ++.+..... ...+.... .+ +|+.++... ........+++|+..+++|+.+
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r-~~~~~~~~------~~--~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 82 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPK-NHVSLVTK------EN--QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM 82 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCS-SEEEEECT------TC--CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred CceEEECCCCCeEec-CCCCCCCCc-cceEEEEE------CC--EEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence 568899999999986 332221111 11222221 12 344444321 1112234589999999999988
Q ss_pred CCCCCCCcccccccceEEECCEEEEEec---------CCcEEEEEcCCCeEeeEe-CCCCCCCCccEEEecCeEEEEeee
Q 015428 247 DTICSEPDVLKLSINGFYMKGFVYWTSL---------SGAILVFDLKDEQYGILP-LPARSGPYGALTQMHGELCYMLPQ 316 (407)
Q Consensus 247 ~~~~~~~~~~~~~~~~v~~~G~lYwl~~---------~~~Il~fD~~~e~~~~i~-lP~~~~~~~~l~~~~G~L~~v~~~ 316 (407)
+..+.+. .....+.++|.+|.+.. ...+..||+.+.+|+.+. +|... .....+..+|+|+++...
T Consensus 83 ~~~p~~r----~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~ 157 (315)
T 4asc_A 83 PPLPSPR----CLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV-YGHTVLSHMDLVYVIGGK 157 (315)
T ss_dssp CCBSSCE----ESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC-BSCEEEEETTEEEEECCB
T ss_pred CCCCcch----hceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc-cceeEEEECCEEEEEeCC
Confidence 7654322 23467788999999865 146999999999999884 44332 234667789999998765
Q ss_pred C-C----CceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec--C----CEEEEEECCCCeEEEec
Q 015428 317 I-Q----DGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL--P----NKVIAYHVKAQKMQVVS 385 (407)
Q Consensus 317 ~-~----~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~--~----~~l~~yd~~t~~~~~l~ 385 (407)
. . .++|... .....|... -.++. .+ .....+..++.++++.. + ..+..||+++++|+.+.
T Consensus 158 ~~~~~~~~~~~~yd-~~~~~W~~~--~~~p~---~r---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 158 GSDRKCLNKMCVYD-PKKFEWKEL--APMQT---AR---SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp CTTSCBCCCEEEEE-TTTTEEEEC--CCCSS---CC---BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC
T ss_pred CCCCcccceEEEEe-CCCCeEEEC--CCCCC---ch---hceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECC
Confidence 2 1 3445432 233555432 22221 11 11122234444444421 1 36999999999999997
Q ss_pred cc
Q 015428 386 ET 387 (407)
Q Consensus 386 ~~ 387 (407)
..
T Consensus 229 ~~ 230 (315)
T 4asc_A 229 AF 230 (315)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.59 E-value=4.9e-06 Score=77.78 Aligned_cols=191 Identities=13% Similarity=0.102 Sum_probs=111.2
Q ss_pred EEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCC--C---cceEEEEEEeCCCCcccccC
Q 015428 173 FYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQN--D---VSIIFFEIYSSRSRSWRTTD 247 (407)
Q Consensus 173 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~--~---~~~~~~~vy~s~t~~W~~~~ 247 (407)
.+.++||.|++|...|.+.... . ...+.... + =+|++++....+ . .....+++||..+++|+.++
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~-r-~~~~~~~~-------~-~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIP-R-NHSSIVTQ-------Q-NQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSC-S-SEEEEECS-------S-SCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred ceEEECCCCCceecccCCccCC-c-cceEEEEE-------C-CEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 4789999999998854332111 1 11222211 1 145555542110 1 11124889999999999987
Q ss_pred CCCCCCcccccccceEEECCEEEEEecC--------CcEEEEEcCCCeEeeEe-CCCCCCCCccEEEecCeEEEEeeeCC
Q 015428 248 TICSEPDVLKLSINGFYMKGFVYWTSLS--------GAILVFDLKDEQYGILP-LPARSGPYGALTQMHGELCYMLPQIQ 318 (407)
Q Consensus 248 ~~~~~~~~~~~~~~~v~~~G~lYwl~~~--------~~Il~fD~~~e~~~~i~-lP~~~~~~~~l~~~~G~L~~v~~~~~ 318 (407)
..+.+. .....+.++|.+|.+... ..+.+||+.+.+|+.+. +|.... ....+..+|+|+++.....
T Consensus 95 ~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~ 169 (318)
T 2woz_A 95 PLPSAR----CLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVY-GHNVISHNGMIYCLGGKTD 169 (318)
T ss_dssp CBSSCB----CSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEE-SCEEEEETTEEEEECCEES
T ss_pred CCCccc----cccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccc-ccEEEEECCEEEEEcCCCC
Confidence 554332 234567889999998642 35899999999999884 444322 3356668999999876421
Q ss_pred -----CceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEe--c----CCEEEEEECCCCeEEEeccc
Q 015428 319 -----DGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIIL--L----PNKVIAYHVKAQKMQVVSET 387 (407)
Q Consensus 319 -----~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~--~----~~~l~~yd~~t~~~~~l~~~ 387 (407)
.++|.. +.....|.... .++. .+ .....+..++.++++. . ...+..||+++++|+.+...
T Consensus 170 ~~~~~~~~~~y-d~~~~~W~~~~--~~p~---~r---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 240 (318)
T 2woz_A 170 DKKCTNRVFIY-NPKKGDWKDLA--PMKT---PR---SMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEF 240 (318)
T ss_dssp SSCBCCCEEEE-ETTTTEEEEEC--CCSS---CC---BSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCC
T ss_pred CCCccceEEEE-cCCCCEEEECC--CCCC---Cc---ccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCC
Confidence 344543 23345564322 2221 11 1112223444444442 1 14588999999999999754
No 16
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.46 E-value=2.8e-05 Score=73.66 Aligned_cols=212 Identities=14% Similarity=0.066 Sum_probs=119.4
Q ss_pred EEeecCceEEEeeec-c------cCCeEEEEEcCcccceeecCCCC-cCCCCcceEEEEecCCCCCCCCCeEEEEEEecc
Q 015428 153 IRTTCNGLVCCQSVF-E------VGNFFYYICNPVTKEWHVLPQPK-FFHGPETAVALVFEPSALGFSAHYEVVCAVPVD 224 (407)
Q Consensus 153 i~~s~~GLll~~~~~-~------~~~~~~~V~NP~T~~~~~LP~~~-~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~ 224 (407)
.+...+|.|.+.++. . .....++++||.|++|..+++.+ ..+ ... .+..++ + +|++++...
T Consensus 60 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r-~~~-~~~~~~-------~--~iyv~GG~~ 128 (357)
T 2uvk_A 60 TSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGM-AGH-VTFVHN-------G--KAYVTGGVN 128 (357)
T ss_dssp EEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCC-SSE-EEEEET-------T--EEEEEECCC
T ss_pred eEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCccc-ccc-eEEEEC-------C--EEEEEeCcC
Confidence 344567777776543 1 01245889999999999999865 322 111 222232 2 566665432
Q ss_pred CCC---------------------------------cceEEEEEEeCCCCcccccCCCCCCCcccccccceEEECCEEEE
Q 015428 225 QND---------------------------------VSIIFFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYW 271 (407)
Q Consensus 225 ~~~---------------------------------~~~~~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYw 271 (407)
... .....+++||..++.|+.+...+.+.. .....+.++|.+|.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~---~~~~~~~~~~~iyv 205 (357)
T 2uvk_A 129 QNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGT---AGAAVVNKGDKTWL 205 (357)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCC---BSCEEEEETTEEEE
T ss_pred CCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCc---ccccEEEECCEEEE
Confidence 100 012589999999999999865433211 12467788999999
Q ss_pred Eec-------CCcEEEEEc--CCCeEeeEe-CCCCCCC-CccEEEecCeEEEEeeeCC------------------CceE
Q 015428 272 TSL-------SGAILVFDL--KDEQYGILP-LPARSGP-YGALTQMHGELCYMLPQIQ------------------DGEC 322 (407)
Q Consensus 272 l~~-------~~~Il~fD~--~~e~~~~i~-lP~~~~~-~~~l~~~~G~L~~v~~~~~------------------~~~w 322 (407)
+.. ...+..||+ .+.+|+.+. +|..... ....+..+|+|+++..... ....
T Consensus 206 ~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~ 285 (357)
T 2uvk_A 206 INGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSY 285 (357)
T ss_dssp ECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEE
T ss_pred EeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceecccccccee
Confidence 864 346888987 899999874 3433322 3357888999999875321 1123
Q ss_pred EEEEc--CCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec----C---CEEEEEECCCCeEEEecc
Q 015428 323 LIGVY--GNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL----P---NKVIAYHVKAQKMQVVSE 386 (407)
Q Consensus 323 ~l~~~--~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~----~---~~l~~yd~~t~~~~~l~~ 386 (407)
.++.+ +...|... -.++. ++ .....+..++.++++.. + ..++.+++++++|.++..
T Consensus 286 ~~~~yd~~~~~W~~~--~~~p~---~r---~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 286 STDIHLWHNGKWDKS--GELSQ---GR---AYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp CCEEEECC---CEEE--EECSS---CC---BSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred eEEEEecCCCceeeC--CCCCC---Cc---ccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 33333 34566443 22321 11 11122234555555421 1 358889999999887754
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.44 E-value=2.7e-05 Score=80.95 Aligned_cols=211 Identities=8% Similarity=0.035 Sum_probs=121.7
Q ss_pred eecCceEEEeeecc-cCCeEEEEEcCcccceeecC-CC-----CcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCC
Q 015428 155 TTCNGLVCCQSVFE-VGNFFYYICNPVTKEWHVLP-QP-----KFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQND 227 (407)
Q Consensus 155 ~s~~GLll~~~~~~-~~~~~~~V~NP~T~~~~~LP-~~-----~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~ 227 (407)
...+|.|++.++.. .....++++||.|++|..++ +. +..+ ....+..+.. .-+|+++++.....
T Consensus 394 ~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R--~~hs~~~~~~-------~~~lyv~GG~~~~~ 464 (695)
T 2zwa_A 394 DVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVAR--MCHTFTTISR-------NNQLLLIGGRKAPH 464 (695)
T ss_dssp EECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCC--BSCEEEEETT-------TTEEEEECCBSSTT
T ss_pred EEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccc--cceEEEEEcc-------CCEEEEEcCCCCCC
Confidence 33567777665421 12246889999999999998 42 2221 1112222210 11466666543222
Q ss_pred cceEEEEEEeCCCCcccccCCCCCCCcccccccceEEE-CCEEEEEecC---CcEEEEEcCCCeEeeEe----CCCCCCC
Q 015428 228 VSIIFFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYM-KGFVYWTSLS---GAILVFDLKDEQYGILP----LPARSGP 299 (407)
Q Consensus 228 ~~~~~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~-~G~lYwl~~~---~~Il~fD~~~e~~~~i~----lP~~~~~ 299 (407)
.....+++||..++.|+.+...+.+. .....+.+ +|.+|.++.. ..+.+||+.+.+|+.+. +|....
T Consensus 465 ~~~~dv~~yd~~t~~W~~~~~~p~~R----~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~- 539 (695)
T 2zwa_A 465 QGLSDNWIFDMKTREWSMIKSLSHTR----FRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSL- 539 (695)
T ss_dssp CBCCCCEEEETTTTEEEECCCCSBCC----BSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCC-
T ss_pred CccccEEEEeCCCCcEEECCCCCCCc----ccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCccc-
Confidence 23346899999999999987543322 23345554 9999998752 27999999999999886 343332
Q ss_pred CccEEEec---CeEEEEeeeCC------CceEEEEEcCCccc----eeeEeeeeecccccCcCCcceEEEeec-CCEEEE
Q 015428 300 YGALTQMH---GELCYMLPQIQ------DGECLIGVYGNLDM----SLKCVIPVEHEVLGETFSDCRVLTCVN-SDILII 365 (407)
Q Consensus 300 ~~~l~~~~---G~L~~v~~~~~------~~~w~l~~~~~~~W----~~~~~i~l~~~~~~~~~~~~~~~~~~~-g~~lll 365 (407)
....+.++ |+|+++..... .++|... .....| .|...-.++. .++ ........+ +.++++
T Consensus 540 ~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd-~~~~~w~~~~~W~~~~~~p~--~~R---~~~~~~~~~~~~iyv~ 613 (695)
T 2zwa_A 540 VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFK-YDAENATEPITVIKKLQHPL--FQR---YGSQIKYITPRKLLIV 613 (695)
T ss_dssp BSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEE-ECTTCSSCCEEEEEEEECGG--GCC---BSCEEEEEETTEEEEE
T ss_pred ceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEE-ccCCccccceEEEEcCCCCC--CCc---ccceEEEeCCCEEEEE
Confidence 22334444 88999876521 2355433 334554 2333332211 111 112223344 444444
Q ss_pred ec---------CCEEEEEECCCCeEEEec
Q 015428 366 LL---------PNKVIAYHVKAQKMQVVS 385 (407)
Q Consensus 366 ~~---------~~~l~~yd~~t~~~~~l~ 385 (407)
.. ...+..||+++++|+.+.
T Consensus 614 GG~~~~~~~~~~~~v~~yd~~t~~W~~~~ 642 (695)
T 2zwa_A 614 GGTSPSGLFDRTNSIISLDPLSETLTSIP 642 (695)
T ss_dssp CCBCSSCCCCTTTSEEEEETTTTEEEECC
T ss_pred CCccCCCCCCCCCeEEEEECCCCeEEEee
Confidence 21 245999999999999664
No 18
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.26 E-value=0.00068 Score=65.84 Aligned_cols=47 Identities=19% Similarity=0.127 Sum_probs=41.7
Q ss_pred ccccCCCCchHHHHHhcCCCCchhhhhhhcccHhhhhhhcCCccccc
Q 015428 61 KLKKNIGLSDVTMEHVLPFLPAKSLCRFKAVSKEWNRWISSPFLAHL 107 (407)
Q Consensus 61 ~~~~~~~Lpd~lle~IL~rLP~~sl~r~r~VCK~Wr~li~sp~F~~~ 107 (407)
..+....||++++..||+.|++++|.++..|||+|+.++.++.+.+.
T Consensus 15 ~~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~ 61 (445)
T 2ovr_B 15 QRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWRE 61 (445)
T ss_dssp CCSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHH
T ss_pred cCChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhh
Confidence 34467789999999999999999999999999999999999877654
No 19
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.26 E-value=0.00078 Score=65.61 Aligned_cols=42 Identities=17% Similarity=0.202 Sum_probs=37.4
Q ss_pred cccCCCCchHHHHHhcCCCCchhhhhhhcccHhhhhhhcC-Cc
Q 015428 62 LKKNIGLSDVTMEHVLPFLPAKSLCRFKAVSKEWNRWISS-PF 103 (407)
Q Consensus 62 ~~~~~~Lpd~lle~IL~rLP~~sl~r~r~VCK~Wr~li~s-p~ 103 (407)
.+....||++++.+||+.||+++|+++..|||+|+.++.+ +.
T Consensus 12 ~d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~ 54 (464)
T 3v7d_B 12 RDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTS 54 (464)
T ss_dssp CCHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHH
T ss_pred cCChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHH
Confidence 3355679999999999999999999999999999999998 43
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.13 E-value=0.00021 Score=69.47 Aligned_cols=46 Identities=35% Similarity=0.437 Sum_probs=39.6
Q ss_pred cccCCCCchH----HHHHhcCCCCchhhhhhhcccHhhhhhhcCCccccc
Q 015428 62 LKKNIGLSDV----TMEHVLPFLPAKSLCRFKAVSKEWNRWISSPFLAHL 107 (407)
Q Consensus 62 ~~~~~~Lpd~----lle~IL~rLP~~sl~r~r~VCK~Wr~li~sp~F~~~ 107 (407)
.+....||++ |+..||+.|++++|.++.+|||+|+.++.++.+.+.
T Consensus 8 ~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~ 57 (435)
T 1p22_A 8 RDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKK 57 (435)
T ss_dssp CCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHH
T ss_pred cChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHH
Confidence 3345678998 999999999999999999999999999998866543
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.05 E-value=6.2e-05 Score=77.71 Aligned_cols=216 Identities=9% Similarity=-0.002 Sum_probs=116.4
Q ss_pred EeecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEE
Q 015428 154 RTTCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFF 233 (407)
Q Consensus 154 ~~s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~ 233 (407)
....+|.|++.++. ....+.++||.|++|..+|+++..+.. . .+..+ +. + ||++++....+......+
T Consensus 249 ~~~~~g~lyv~GG~--~~~~v~~yd~~t~~W~~~~~~~~~R~~-~-s~~~~-~d-----g--~iyv~GG~~~~~~~~~~~ 316 (656)
T 1k3i_A 249 SMDGNGQIVVTGGN--DAKKTSLYDSSSDSWIPGPDMQVARGY-Q-SSATM-SD-----G--RVFTIGGSWSGGVFEKNG 316 (656)
T ss_dssp EECTTSCEEEECSS--STTCEEEEEGGGTEEEECCCCSSCCSS-C-EEEEC-TT-----S--CEEEECCCCCSSSCCCCE
T ss_pred cCCCCCCEEEeCCC--CCCceEEecCcCCceeECCCCCccccc-c-ceEEe-cC-----C--eEEEEeCcccCCcccccc
Confidence 33568888887652 334789999999999999977654422 1 22222 11 1 566665532112234568
Q ss_pred EEEeCCCCcccccCCCCCCCcccccccceEEECCEEEEEe----------cCCcEEEEEcCCCeEeeEeCCCCC------
Q 015428 234 EIYSSRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYWTS----------LSGAILVFDLKDEQYGILPLPARS------ 297 (407)
Q Consensus 234 ~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~----------~~~~Il~fD~~~e~~~~i~lP~~~------ 297 (407)
++||..++.|+.+................+..+|.+|.+. ....+..||+.+..|.....+...
T Consensus 317 e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~ 396 (656)
T 1k3i_A 317 EVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAP 396 (656)
T ss_dssp EEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECC
T ss_pred eEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCC
Confidence 9999999999987432110000000111222455555544 235789999999988643211111
Q ss_pred CCCccEE----EecCeEEEEeeeCC-------CceEEEEEcCCccceeeEee--eeecccccCcCCcceEEEee-cCCEE
Q 015428 298 GPYGALT----QMHGELCYMLPQIQ-------DGECLIGVYGNLDMSLKCVI--PVEHEVLGETFSDCRVLTCV-NSDIL 363 (407)
Q Consensus 298 ~~~~~l~----~~~G~L~~v~~~~~-------~~~w~l~~~~~~~W~~~~~i--~l~~~~~~~~~~~~~~~~~~-~g~~l 363 (407)
......+ ..+|+|+++..... .....++.++.....|.... .++. ++ .....++. +|.++
T Consensus 397 ~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~---~R---~~~~~~~l~~g~i~ 470 (656)
T 1k3i_A 397 DAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYF---AR---TFHTSVVLPDGSTF 470 (656)
T ss_dssp CCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSS---CC---BSCEEEECTTSCEE
T ss_pred CCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCC---Cc---ccCCeEECCCCCEE
Confidence 1111222 24899999876421 22334555554322233322 2221 11 11222233 66666
Q ss_pred EEec------------CCEEEEEECCCCeEEEeccc
Q 015428 364 IILL------------PNKVIAYHVKAQKMQVVSET 387 (407)
Q Consensus 364 ll~~------------~~~l~~yd~~t~~~~~l~~~ 387 (407)
++.. -..+..||+++++|+.+...
T Consensus 471 v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~ 506 (656)
T 1k3i_A 471 ITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN 506 (656)
T ss_dssp EECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC
T ss_pred EECCcccCcCcCCCCcccceEEEcCCCCceeecCCC
Confidence 5532 14589999999999988643
No 22
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.72 E-value=0.00077 Score=69.46 Aligned_cols=195 Identities=9% Similarity=0.026 Sum_probs=106.2
Q ss_pred EEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCC-----cceEEEEEEeCCCCcccccCCC
Q 015428 175 YICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQND-----VSIIFFEIYSSRSRSWRTTDTI 249 (407)
Q Consensus 175 ~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~-----~~~~~~~vy~s~t~~W~~~~~~ 249 (407)
...+|.+++|..+++.|... ...+ +-+. .=+|+.++...... .....+++||..+++|+.....
T Consensus 169 ~~~dp~~~~W~~~~~~P~~~---~~~a--v~~~------~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~ 237 (656)
T 1k3i_A 169 TAPQPGLGRWGPTIDLPIVP---AAAA--IEPT------SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT 237 (656)
T ss_dssp CCCCTTSCEEEEEEECSSCC---SEEE--EETT------TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE
T ss_pred ccCCCCCCeeeeeccCCCCc---eeEE--EEec------CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCccc
Confidence 34689999999877765421 2222 2221 12566665432211 1345789999999999987654
Q ss_pred CCCCcccccccceEEECCEEEEEec--CCcEEEEEcCCCeEeeEe-CCCCCCCCccEEEe-cCeEEEEeeeCC-----Cc
Q 015428 250 CSEPDVLKLSINGFYMKGFVYWTSL--SGAILVFDLKDEQYGILP-LPARSGPYGALTQM-HGELCYMLPQIQ-----DG 320 (407)
Q Consensus 250 ~~~~~~~~~~~~~v~~~G~lYwl~~--~~~Il~fD~~~e~~~~i~-lP~~~~~~~~l~~~-~G~L~~v~~~~~-----~~ 320 (407)
+.+.... .....+..+|.+|.+.. ...+..||+.+.+|..+. +|.. ......+.+ +|+|+++....+ .+
T Consensus 238 ~~~~~~~-~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~-R~~~s~~~~~dg~iyv~GG~~~~~~~~~~ 315 (656)
T 1k3i_A 238 VTKHDMF-CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVA-RGYQSSATMSDGRVFTIGGSWSGGVFEKN 315 (656)
T ss_dssp ECSCCCS-SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSC-CSSCEEEECTTSCEEEECCCCCSSSCCCC
T ss_pred CCCCCCc-cccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcc-ccccceEEecCCeEEEEeCcccCCccccc
Confidence 3322111 01122335899999875 347999999999998874 3322 223456677 999999987321 22
Q ss_pred eEEEEEcCCccceeeEeeeeecccccCcC------CcceEEEeecCCEEEEecCCEEEEEECCCCeEEE
Q 015428 321 ECLIGVYGNLDMSLKCVIPVEHEVLGETF------SDCRVLTCVNSDILIILLPNKVIAYHVKAQKMQV 383 (407)
Q Consensus 321 ~w~l~~~~~~~W~~~~~i~l~~~~~~~~~------~~~~~~~~~~g~~lll~~~~~l~~yd~~t~~~~~ 383 (407)
++. .+...+.|.........+....... +..-.++..+|.++.......+..||+++++|..
T Consensus 316 ~e~-yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~ 383 (656)
T 1k3i_A 316 GEV-YSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK 383 (656)
T ss_dssp EEE-EETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE
T ss_pred ceE-eCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceee
Confidence 222 3334455643211111111011000 0011111124443333334678999999998764
No 23
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.66 E-value=0.00089 Score=69.54 Aligned_cols=149 Identities=11% Similarity=-0.021 Sum_probs=93.4
Q ss_pred EEeec--CceEEEeeecccC---CeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCC
Q 015428 153 IRTTC--NGLVCCQSVFEVG---NFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQND 227 (407)
Q Consensus 153 i~~s~--~GLll~~~~~~~~---~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~ 227 (407)
..... +|.+++.++.... ...++++||.|++|..+++.+..+.. . .+.... .-+|+++++...
T Consensus 444 s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h-~~~~~~--------~~~iyv~GG~~~-- 511 (695)
T 2zwa_A 444 TFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-H-SACSLP--------DGNVLILGGVTE-- 511 (695)
T ss_dssp EEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-C-EEEECT--------TSCEEEECCBCS--
T ss_pred EEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-c-eEEEEc--------CCEEEEECCCCC--
Confidence 34444 7877776653221 25689999999999999887654322 2 222211 114555554431
Q ss_pred cceEEEEEEeCCCCcccccCCCCCCCcccccccceEEEC---CEEEEEecC--------CcEEEEEcCCCe------Eee
Q 015428 228 VSIIFFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMK---GFVYWTSLS--------GAILVFDLKDEQ------YGI 290 (407)
Q Consensus 228 ~~~~~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~---G~lYwl~~~--------~~Il~fD~~~e~------~~~ 290 (407)
.. .+++||..++.|+.+..... .+.......++.++ |.+|.++.. ..+.+||+.+.+ |..
T Consensus 512 ~~--~v~~yd~~t~~W~~~~~~g~-~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~ 588 (695)
T 2zwa_A 512 GP--AMLLYNVTEEIFKDVTPKDE-FFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIK 588 (695)
T ss_dssp SC--SEEEEETTTTEEEECCCSSG-GGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEE
T ss_pred CC--CEEEEECCCCceEEccCCCC-CCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEE
Confidence 11 79999999999998875210 11111223446667 899998742 469999999999 877
Q ss_pred EeC-CCCCCCCccEEEec-CeEEEEeee
Q 015428 291 LPL-PARSGPYGALTQMH-GELCYMLPQ 316 (407)
Q Consensus 291 i~l-P~~~~~~~~l~~~~-G~L~~v~~~ 316 (407)
+.- |.........+..+ |+|+++...
T Consensus 589 ~~~~p~~~R~~~~~~~~~~~~iyv~GG~ 616 (695)
T 2zwa_A 589 KLQHPLFQRYGSQIKYITPRKLLIVGGT 616 (695)
T ss_dssp EEECGGGCCBSCEEEEEETTEEEEECCB
T ss_pred cCCCCCCCcccceEEEeCCCEEEEECCc
Confidence 743 43333344667777 999998764
No 24
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.46 E-value=5.3e-05 Score=71.06 Aligned_cols=45 Identities=22% Similarity=0.191 Sum_probs=40.3
Q ss_pred cccCCCCchHHHHHhcCCCCchhhhhhhcccHhhhhhhcCCcccc
Q 015428 62 LKKNIGLSDVTMEHVLPFLPAKSLCRFKAVSKEWNRWISSPFLAH 106 (407)
Q Consensus 62 ~~~~~~Lpd~lle~IL~rLP~~sl~r~r~VCK~Wr~li~sp~F~~ 106 (407)
...|..|||+++.+||.+|+.+++.+++.|||+|+.++.+|...+
T Consensus 6 ~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~~ 50 (336)
T 2ast_B 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (336)
T ss_dssp -CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTSS
T ss_pred cCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhhe
Confidence 347899999999999999999999999999999999998887554
No 25
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.37 E-value=4.8e-05 Score=69.17 Aligned_cols=44 Identities=23% Similarity=0.384 Sum_probs=39.5
Q ss_pred CCCCchHHHHHhcCCCCchhhhhhhcccHhhhhhhcCCcccccc
Q 015428 65 NIGLSDVTMEHVLPFLPAKSLCRFKAVSKEWNRWISSPFLAHLQ 108 (407)
Q Consensus 65 ~~~Lpd~lle~IL~rLP~~sl~r~r~VCK~Wr~li~sp~F~~~~ 108 (407)
+..||++++..||+.|++++|+++.+|||+||.+++++...+.+
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~ 48 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYF 48 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHH
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 34799999999999999999999999999999999999766543
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.95 E-value=0.00022 Score=72.26 Aligned_cols=37 Identities=22% Similarity=0.442 Sum_probs=29.4
Q ss_pred cccCCCCchHHHHHhcCCCC-chhhhhhhcccHhhhhh
Q 015428 62 LKKNIGLSDVTMEHVLPFLP-AKSLCRFKAVSKEWNRW 98 (407)
Q Consensus 62 ~~~~~~Lpd~lle~IL~rLP-~~sl~r~r~VCK~Wr~l 98 (407)
...|..|||+++.+||++|| .+++.+++.|||+|+.+
T Consensus 3 ~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 3 KRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred ccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 45889999999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.82 E-value=0.0032 Score=63.60 Aligned_cols=34 Identities=18% Similarity=0.332 Sum_probs=31.7
Q ss_pred CCCchHHHHHhcCCC-CchhhhhhhcccHhhhhhh
Q 015428 66 IGLSDVTMEHVLPFL-PAKSLCRFKAVSKEWNRWI 99 (407)
Q Consensus 66 ~~Lpd~lle~IL~rL-P~~sl~r~r~VCK~Wr~li 99 (407)
..|||+++++||.+| |.+++.+++.|||+|+.+.
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 479999999999999 8999999999999999884
No 28
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=92.06 E-value=6.9 Score=35.61 Aligned_cols=191 Identities=9% Similarity=-0.005 Sum_probs=103.7
Q ss_pred cCceEEEeeecccCCeEEEEEcCcccce-eecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEE
Q 015428 157 CNGLVCCQSVFEVGNFFYYICNPVTKEW-HVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEI 235 (407)
Q Consensus 157 ~~GLll~~~~~~~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~v 235 (407)
.++.+.+.. .....+.|+|+.|++. ..+|... ...++.+++. + ++.+.... .-.+.+
T Consensus 52 ~~~~lyv~~---~~~~~v~viD~~t~~~~~~i~~~~------~p~~i~~~~~-----g--~lyv~~~~------~~~v~~ 109 (328)
T 3dsm_A 52 RDGIGWIVV---NNSHVIFAIDINTFKEVGRITGFT------SPRYIHFLSD-----E--KAYVTQIW------DYRIFI 109 (328)
T ss_dssp ETTEEEEEE---GGGTEEEEEETTTCCEEEEEECCS------SEEEEEEEET-----T--EEEEEEBS------CSEEEE
T ss_pred ECCEEEEEE---cCCCEEEEEECcccEEEEEcCCCC------CCcEEEEeCC-----C--eEEEEECC------CCeEEE
Confidence 466666655 2456799999999987 4464321 1234555543 2 45444321 126788
Q ss_pred EeCCCCcccc-cCCCCCCCcccccccceEEECCEEEEEec--CCcEEEEEcCCCeE-eeEeCCCCCCCCccEEEecCeEE
Q 015428 236 YSSRSRSWRT-TDTICSEPDVLKLSINGFYMKGFVYWTSL--SGAILVFDLKDEQY-GILPLPARSGPYGALTQMHGELC 311 (407)
Q Consensus 236 y~s~t~~W~~-~~~~~~~~~~~~~~~~~v~~~G~lYwl~~--~~~Il~fD~~~e~~-~~i~lP~~~~~~~~l~~~~G~L~ 311 (407)
+|..++.-.. +.... ..........-++.+|.+|.... ++.|.++|+.+.+. ..++.... .......-+|+|+
T Consensus 110 iD~~t~~~~~~i~~g~-~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~--p~~i~~~~dG~l~ 186 (328)
T 3dsm_A 110 INPKTYEITGYIECPD-MDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ--PTSLVMDKYNKMW 186 (328)
T ss_dssp EETTTTEEEEEEECTT-CCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC--BCCCEECTTSEEE
T ss_pred EECCCCeEEEEEEcCC-ccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC--ccceEEcCCCCEE
Confidence 9988875321 11111 00000011223346788888753 67899999998765 44554322 1222223368988
Q ss_pred EEeeeC---------CCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEee-cCCEEEEecCCEEEEEECCCCeE
Q 015428 312 YMLPQI---------QDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCV-NSDILIILLPNKVIAYHVKAQKM 381 (407)
Q Consensus 312 ~v~~~~---------~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~-~g~~lll~~~~~l~~yd~~t~~~ 381 (407)
+++... ...+..+ +.... .....+.++. + .....+++. +++.+++... .++.+|++++++
T Consensus 187 v~~~~~~~~~~~~~~~~~v~~i-d~~t~--~v~~~~~~~~---g---~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~ 256 (328)
T 3dsm_A 187 TITDGGYEGSPYGYEAPSLYRI-DAETF--TVEKQFKFKL---G---DWPSEVQLNGTRDTLYWINN-DIWRMPVEADRV 256 (328)
T ss_dssp EEBCCBCTTCSSCBCCCEEEEE-ETTTT--EEEEEEECCT---T---CCCEEEEECTTSCEEEEESS-SEEEEETTCSSC
T ss_pred EEECCCccCCccccCCceEEEE-ECCCC--eEEEEEecCC---C---CCceeEEEecCCCEEEEEcc-EEEEEECCCCce
Confidence 877642 1223332 22222 2334444421 1 123455664 5777777655 899999999886
Q ss_pred E
Q 015428 382 Q 382 (407)
Q Consensus 382 ~ 382 (407)
.
T Consensus 257 ~ 257 (328)
T 3dsm_A 257 P 257 (328)
T ss_dssp C
T ss_pred e
Confidence 3
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=86.43 E-value=13 Score=34.06 Aligned_cols=111 Identities=14% Similarity=0.184 Sum_probs=61.4
Q ss_pred cceEEECCEEEEEecCCcEEEEEcCCC--eEeeEeCCCCC--------CCCccEEEecCeEEEEeeeCCCceEEEEEcCC
Q 015428 260 INGFYMKGFVYWTSLSGAILVFDLKDE--QYGILPLPARS--------GPYGALTQMHGELCYMLPQIQDGECLIGVYGN 329 (407)
Q Consensus 260 ~~~v~~~G~lYwl~~~~~Il~fD~~~e--~~~~i~lP~~~--------~~~~~l~~~~G~L~~v~~~~~~~~w~l~~~~~ 329 (407)
..++..+|.+|..+.++.|.+||..+. .|+. +++... .....+...+|+|++.... ..+..+. ..+
T Consensus 47 ~~p~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~--g~l~a~d-~~t 122 (376)
T 3q7m_A 47 LHPALADNVVYAADRAGLVKALNADDGKEIWSV-SLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK--AQVYALN-TSD 122 (376)
T ss_dssp CCCEEETTEEEEECTTSEEEEEETTTCCEEEEE-ECCC---CCSCCCCCEEEEEEEETTEEEEEETT--SEEEEEE-TTT
T ss_pred eccEEECCEEEEEcCCCeEEEEEccCCceeeee-cCccccccccccCcccccCceEeCCEEEEEcCC--CEEEEEE-CCC
Confidence 467889999999887889999999754 4543 444321 1122345567777775543 3344333 222
Q ss_pred ccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec-CCEEEEEECCCCeEEEe
Q 015428 330 LDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL-PNKVIAYHVKAQKMQVV 384 (407)
Q Consensus 330 ~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~-~~~l~~yd~~t~~~~~l 384 (407)
++-.|+. .+..... ..| . ..++.|++.+ +..++.+|.++++...-
T Consensus 123 G~~~W~~--~~~~~~~------~~p-~-~~~~~v~v~~~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 123 GTVAWQT--KVAGEAL------SRP-V-VSDGLVLIHTSNGQLQALNEADGAVKWT 168 (376)
T ss_dssp CCEEEEE--ECSSCCC------SCC-E-EETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEE--eCCCceE------cCC-E-EECCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 3222222 2211111 111 1 2345566654 57799999998875543
No 30
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=85.52 E-value=19 Score=31.91 Aligned_cols=196 Identities=11% Similarity=0.036 Sum_probs=94.1
Q ss_pred ecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEE
Q 015428 156 TCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEI 235 (407)
Q Consensus 156 s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~v 235 (407)
..+|.|++.. .....++.+||.|++...+..+. ...++++++. +.+ +++ . . ..+.+
T Consensus 22 ~~~~~l~~~d---~~~~~i~~~d~~~~~~~~~~~~~------~~~~i~~~~d-----G~l-~v~-~-~-------~~l~~ 77 (297)
T 3g4e_A 22 EVSNSLLFVD---IPAKKVCRWDSFTKQVQRVTMDA------PVSSVALRQS-----GGY-VAT-I-G-------TKFCA 77 (297)
T ss_dssp TTTTEEEEEE---TTTTEEEEEETTTCCEEEEECSS------CEEEEEEBTT-----SSE-EEE-E-T-------TEEEE
T ss_pred CCCCEEEEEE---CCCCEEEEEECCCCcEEEEeCCC------ceEEEEECCC-----CCE-EEE-E-C-------CeEEE
Confidence 3356666654 34578899999998876554321 2356777875 442 222 2 1 15788
Q ss_pred EeCCCCcccccCCCCCCCcccccccceEEE--CCEEEEEec------------CCcEEEEEcCCCeEeeEeCCCCCCCCc
Q 015428 236 YSSRSRSWRTTDTICSEPDVLKLSINGFYM--KGFVYWTSL------------SGAILVFDLKDEQYGILPLPARSGPYG 301 (407)
Q Consensus 236 y~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lYwl~~------------~~~Il~fD~~~e~~~~i~lP~~~~~~~ 301 (407)
|+..++.++.+........ . .....+.+ +|.+|+-.. .+.|..+|.....-.... ......
T Consensus 78 ~d~~~g~~~~~~~~~~~~~-~-~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~---~~~~pn 152 (297)
T 3g4e_A 78 LNWKEQSAVVLATVDNDKK-N-NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD---QVDISN 152 (297)
T ss_dssp EETTTTEEEEEEECCTTCS-S-EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE---EESBEE
T ss_pred EECCCCcEEEEEecCCCCC-C-CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee---cccccc
Confidence 9999888876543211111 0 11123333 588766431 246888887643222111 000011
Q ss_pred cEEEe-cCeEEEEeeeCCCceEEEEEc-CCccceeeEee-eeecccccCcCCcceEEEee-cCCEEEEe-cCCEEEEEEC
Q 015428 302 ALTQM-HGELCYMLPQIQDGECLIGVY-GNLDMSLKCVI-PVEHEVLGETFSDCRVLTCV-NSDILIIL-LPNKVIAYHV 376 (407)
Q Consensus 302 ~l~~~-~G~L~~v~~~~~~~~w~l~~~-~~~~W~~~~~i-~l~~~~~~~~~~~~~~~~~~-~g~~lll~-~~~~l~~yd~ 376 (407)
.++.. +|+..++.......+|..... .++...-...+ .+.. ..+....+++. +|.+.+-. .+..+..||+
T Consensus 153 gi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~-----~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 153 GLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK-----EEQIPDGMCIDAEGKLWVACYNGGRVIRLDP 227 (297)
T ss_dssp EEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG-----GGCEEEEEEEBTTSCEEEEEETTTEEEEECT
T ss_pred ceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC-----CCCCCCeeEECCCCCEEEEEcCCCEEEEEcC
Confidence 22222 465333333333455654321 22322111111 1110 01223445554 45443333 3567999999
Q ss_pred CCCeE-EEec
Q 015428 377 KAQKM-QVVS 385 (407)
Q Consensus 377 ~t~~~-~~l~ 385 (407)
+++++ ..+.
T Consensus 228 ~tG~~~~~i~ 237 (297)
T 3g4e_A 228 VTGKRLQTVK 237 (297)
T ss_dssp TTCCEEEEEE
T ss_pred CCceEEEEEE
Confidence 96664 4444
No 31
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=83.59 E-value=43 Score=34.41 Aligned_cols=187 Identities=7% Similarity=0.025 Sum_probs=92.1
Q ss_pred eEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCcccccCCCCC
Q 015428 172 FFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRSWRTTDTICS 251 (407)
Q Consensus 172 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~~ 251 (407)
..++++||.|+++..++.... .......+..|+. + ++. ++.. ..+..|+..++.|+.......
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~--~~~~v~~i~~d~~-----g--~lw-igt~-------~Gl~~~~~~~~~~~~~~~~~~ 489 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKN--ELLDVRVFYEDKN-----K--KIW-IGTH-------AGVFVIDLASKKVIHHYDTSN 489 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTT--CCCCEEEEEECTT-----S--EEE-EEET-------TEEEEEESSSSSCCEEECTTT
T ss_pred CCEEEEcCCCCcEEEeccCCC--CCCeEEEEEECCC-----C--CEE-EEEC-------CceEEEeCCCCeEEecccCcc
Confidence 567788888887777654311 1112234444533 2 222 2211 157788999988876542210
Q ss_pred CCcccccccceEEE--CCEEEEEec-CCcEEEEEcCCCeEeeEeCCCCCCCC--ccEEE-ecCeEEEEeeeCCCceEEEE
Q 015428 252 EPDVLKLSINGFYM--KGFVYWTSL-SGAILVFDLKDEQYGILPLPARSGPY--GALTQ-MHGELCYMLPQIQDGECLIG 325 (407)
Q Consensus 252 ~~~~~~~~~~~v~~--~G~lYwl~~-~~~Il~fD~~~e~~~~i~lP~~~~~~--~~l~~-~~G~L~~v~~~~~~~~w~l~ 325 (407)
.........+++. +|.+ |++. .+.|..||..++++..+..+...... ..+.+ .+|+|.+.+.. .+ +.
T Consensus 490 -~~~~~~~i~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~---Gl--v~ 562 (781)
T 3v9f_A 490 -SQLLENFVRSIAQDSEGRF-WIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGE---GL--VC 562 (781)
T ss_dssp -SSCSCSCEEEEEECTTCCE-EEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEETT---EE--EE
T ss_pred -cccccceeEEEEEcCCCCE-EEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEECC---Cc--eE
Confidence 0000011233444 4665 5554 46899999999999887653322111 12222 24555554331 11 01
Q ss_pred EcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEecCCEEEEEECCCCeEEEecc
Q 015428 326 VYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILLPNKVIAYHVKAQKMQVVSE 386 (407)
Q Consensus 326 ~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~~~~l~~yd~~t~~~~~l~~ 386 (407)
.++...-.. ..+.... |.....+..+.....+.|.+.+...|..||+++++++....
T Consensus 563 ~~d~~~~~~-~~~~~~~---gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~~~~~~~~~~ 619 (781)
T 3v9f_A 563 FPSARNFDY-QVFQRKE---GLPNTHIRAISEDKNGNIWASTNTGISCYITSKKCFYTYDH 619 (781)
T ss_dssp ESCTTTCCC-EEECGGG---TCSCCCCCEEEECSSSCEEEECSSCEEEEETTTTEEEEECG
T ss_pred EECCCCCcE-EEccccC---CCCCceEEEEEECCCCCEEEEcCCceEEEECCCCceEEecc
Confidence 121111011 1111111 11011233444444455677778889999999999887653
No 32
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=83.25 E-value=41 Score=33.97 Aligned_cols=189 Identities=10% Similarity=-0.014 Sum_probs=97.0
Q ss_pred CeEEEEEcCccccee--ecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCcccccCC
Q 015428 171 NFFYYICNPVTKEWH--VLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRSWRTTDT 248 (407)
Q Consensus 171 ~~~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~ 248 (407)
...+++++.-|++.. .+-..+. .........+.|. ++|-++..... .....+.+++..++.|+.+..
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~~~~--~~~~~~~~~~SpD-----G~~l~~~~~~~----~~~~~l~~~~~~~~~~~~l~~ 269 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHERTG--DPTTFLQSDLSRD-----GKYLFVYILRG----WSENDVYWKRPGEKDFRLLVK 269 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEECCCC--CTTCEEEEEECTT-----SCCEEEEEEET----TTEEEEEEECTTCSSCEEEEE
T ss_pred CCEEEEEECCCCchhceEEEecCC--CCEEEEEEEECCC-----CCEEEEEEeCC----CCceEEEEEcCCCCceEEeec
Confidence 356889998887632 2221111 1123345667765 56665554321 134456666776777876653
Q ss_pred CCCCCcccccccceEEECCEEEEEec----CCcEEEEEcCCCe---EeeEeCCCCCCCCccEEEecCeEEEEeeeCC-Cc
Q 015428 249 ICSEPDVLKLSINGFYMKGFVYWTSL----SGAILVFDLKDEQ---YGILPLPARSGPYGALTQMHGELCYMLPQIQ-DG 320 (407)
Q Consensus 249 ~~~~~~~~~~~~~~v~~~G~lYwl~~----~~~Il~fD~~~e~---~~~i~lP~~~~~~~~l~~~~G~L~~v~~~~~-~~ 320 (407)
... ....++..+|.+|..+. ...|..+|+.+.. |..+-.+.....-..+...+|.|.+...... ..
T Consensus 270 ~~~------~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~ 343 (695)
T 2bkl_A 270 GVG------AKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSE 343 (695)
T ss_dssp CSS------CCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEE
T ss_pred CCC------ceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEE
Confidence 211 11233446777777664 4689999997643 6666433322111123344778776665432 34
Q ss_pred eEEEEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCCEEEEec-----CCEEEEEECCCCeEEEecc
Q 015428 321 ECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSDILIILL-----PNKVIAYHVKAQKMQVVSE 386 (407)
Q Consensus 321 ~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll~~-----~~~l~~yd~~t~~~~~l~~ 386 (407)
+|.+.. + +. ..+.+.++. . +....+.+ .+++.+++.. ...++.||+++++.+.+..
T Consensus 344 l~~~~~-~-g~--~~~~l~~~~--~----~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~ 405 (695)
T 2bkl_A 344 VRVATL-K-GK--PVRTVQLPG--V----GAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAK 405 (695)
T ss_dssp EEEEET-T-CC--EEEECCCSS--S----SEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEE
T ss_pred EEEEeC-C-CC--eeEEecCCC--C----eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEec
Confidence 454431 1 11 122233220 0 11111222 2455555431 3579999999988777653
No 33
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=82.22 E-value=25 Score=30.79 Aligned_cols=199 Identities=10% Similarity=0.011 Sum_probs=96.2
Q ss_pred EEeecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEE--Eecc------
Q 015428 153 IRTTCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCA--VPVD------ 224 (407)
Q Consensus 153 i~~s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~--~~~~------ 224 (407)
+.-+.+|.+++.. .....++++||.|++...+..............+.+++. +.+-+.-. +...
T Consensus 74 l~~~~dg~l~v~~---~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~-----G~l~vtd~~~g~~~~~~~~~ 145 (296)
T 3e5z_A 74 HCLNKQGHLIACS---HGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPD-----GSLWFSDPTYGIDKPEEGYG 145 (296)
T ss_dssp EEECTTCCEEEEE---TTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTT-----SCEEEEECSHHHHCGGGSSC
T ss_pred eeECCCCcEEEEe---cCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC-----CCEEEECCcccccccccccc
Confidence 4445577776654 244679999999998877643211100111123556765 33222100 1000
Q ss_pred -CCCcceEEEEEEeCCCCcccccCCCCCCCcccccccceEEE--CCEEEEEec-CCcEEEEEcC-CCeE----eeEeCCC
Q 015428 225 -QNDVSIIFFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYM--KGFVYWTSL-SGAILVFDLK-DEQY----GILPLPA 295 (407)
Q Consensus 225 -~~~~~~~~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lYwl~~-~~~Il~fD~~-~e~~----~~i~lP~ 295 (407)
..+.....+..|+.. +.-+..... . ....++.+ +|.+++... .+.|..||+. +..+ ..+ ..
T Consensus 146 ~~~~~~~~~l~~~~~~-g~~~~~~~~---~----~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~--~~ 215 (296)
T 3e5z_A 146 GEMELPGRWVFRLAPD-GTLSAPIRD---R----VKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF--TV 215 (296)
T ss_dssp CCCCSSSCEEEEECTT-SCEEEEECC---C----SSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE--CC
T ss_pred ccccCCCcEEEEECCC-CCEEEeecC---C----CCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe--eC
Confidence 000111245555555 443322110 0 01134444 576665433 4689999986 4444 222 11
Q ss_pred CCCCCccEEE-ecCeEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEe--ecCCEEEEecCCEEE
Q 015428 296 RSGPYGALTQ-MHGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC--VNSDILIILLPNKVI 372 (407)
Q Consensus 296 ~~~~~~~l~~-~~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~--~~g~~lll~~~~~l~ 372 (407)
....-..+.. .+|+|++.. ...+..+ +.+ ++ ....+..+. + ...++| .+++.|++.+...++
T Consensus 216 ~~~~p~~i~~d~~G~l~v~~---~~~v~~~-~~~-g~--~~~~~~~~~-------~-~~~~~f~~~d~~~L~v~t~~~l~ 280 (296)
T 3e5z_A 216 EPGKTDGLRVDAGGLIWASA---GDGVHVL-TPD-GD--ELGRVLTPQ-------T-TSNLCFGGPEGRTLYMTVSTEFW 280 (296)
T ss_dssp SSSCCCSEEEBTTSCEEEEE---TTEEEEE-CTT-SC--EEEEEECSS-------C-CCEEEEESTTSCEEEEEETTEEE
T ss_pred CCCCCCeEEECCCCCEEEEc---CCeEEEE-CCC-CC--EEEEEECCC-------C-ceeEEEECCCCCEEEEEcCCeEE
Confidence 1111113333 367877766 2333322 111 21 222333221 1 233445 256688888889999
Q ss_pred EEECCCCeEEEe
Q 015428 373 AYHVKAQKMQVV 384 (407)
Q Consensus 373 ~yd~~t~~~~~l 384 (407)
.++++++++++.
T Consensus 281 ~~~~~~~~~~~~ 292 (296)
T 3e5z_A 281 SIETNVRGLEHH 292 (296)
T ss_dssp EEECSCCBCCC-
T ss_pred EEEccccccccc
Confidence 999999998764
No 34
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=81.87 E-value=25 Score=30.46 Aligned_cols=191 Identities=8% Similarity=-0.012 Sum_probs=95.3
Q ss_pred EEeecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEE
Q 015428 153 IRTTCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIF 232 (407)
Q Consensus 153 i~~s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~ 232 (407)
+.-..+|.+.+.. .....++++|| +++......+.. .....++.+++. +. +...... ...
T Consensus 104 i~~~~~g~l~v~~---~~~~~i~~~d~-~g~~~~~~~~~~---~~~~~~i~~~~~-----g~--l~v~~~~------~~~ 163 (299)
T 2z2n_A 104 ITEGPNGDIWFTE---MNGNRIGRITD-DGKIREYELPNK---GSYPSFITLGSD-----NA--LWFTENQ------NNA 163 (299)
T ss_dssp EEECTTSCEEEEE---TTTTEEEEECT-TCCEEEEECSST---TCCEEEEEECTT-----SC--EEEEETT------TTE
T ss_pred eEECCCCCEEEEe---cCCceEEEECC-CCCEEEecCCCC---CCCCceEEEcCC-----CC--EEEEeCC------CCE
Confidence 4444578777755 24567899999 877765543221 112356677765 22 2222211 125
Q ss_pred EEEEeCCCCcccccCCCCCCCcccccccceEEE--CCEEEEEec-CCcEEEEEcCCCeEeeEeCCCCCCCCccEEE-ecC
Q 015428 233 FEIYSSRSRSWRTTDTICSEPDVLKLSINGFYM--KGFVYWTSL-SGAILVFDLKDEQYGILPLPARSGPYGALTQ-MHG 308 (407)
Q Consensus 233 ~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lYwl~~-~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~-~~G 308 (407)
+.+|+. ++........ ... ....++.+ +|.+|+... .+.|..||+ +.++..+.+|.....-..+.. -+|
T Consensus 164 i~~~~~-~g~~~~~~~~-~~~----~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g 236 (299)
T 2z2n_A 164 IGRITE-SGDITEFKIP-TPA----SGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGI 236 (299)
T ss_dssp EEEECT-TCCEEEEECS-STT----CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTT
T ss_pred EEEEcC-CCcEEEeeCC-CCC----CcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCC
Confidence 677777 6666543211 011 11124444 478766553 578999999 777777766643222123333 257
Q ss_pred eEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEe-cCCEEEEEECCCCeEE
Q 015428 309 ELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIIL-LPNKVIAYHVKAQKMQ 382 (407)
Q Consensus 309 ~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~-~~~~l~~yd~~t~~~~ 382 (407)
+|++.... ...++.+.. .+. . ..+.++ +. ......+++ .++.|++. ....++.||+++++++
T Consensus 237 ~l~v~~~~-~~~i~~~d~--~g~--~-~~~~~~----~~-~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 237 DLWFTEWG-ANKIGRLTS--NNI--I-EEYPIQ----IK-SAEPHGICF-DGETIWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp CEEEEETT-TTEEEEEET--TTE--E-EEEECS----SS-SCCEEEEEE-CSSCEEEEETTTEEEEEEEC-----
T ss_pred CEEEeccC-CceEEEECC--CCc--e-EEEeCC----CC-CCccceEEe-cCCCEEEEecCCcEEEEEcCcccCC
Confidence 76665432 223333321 111 1 122221 10 012344455 44445554 4689999999998764
No 35
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=81.79 E-value=31 Score=31.51 Aligned_cols=189 Identities=10% Similarity=0.019 Sum_probs=95.0
Q ss_pred EeecCceEEEeeecccCCeEEEEEcCcccceee-cCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEE
Q 015428 154 RTTCNGLVCCQSVFEVGNFFYYICNPVTKEWHV-LPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIF 232 (407)
Q Consensus 154 ~~s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~ 232 (407)
....+|.|.+.. ....++.+|+.|++.+. .+...... .... .+ +. +|++... + -.
T Consensus 99 ~~~~~~~v~v~~----~~g~l~a~d~~tG~~~W~~~~~~~~~-~~p~----~~-------~~-~v~v~~~----~---g~ 154 (376)
T 3q7m_A 99 VTVSGGHVYIGS----EKAQVYALNTSDGTVAWQTKVAGEAL-SRPV----VS-------DG-LVLIHTS----N---GQ 154 (376)
T ss_dssp EEEETTEEEEEE----TTSEEEEEETTTCCEEEEEECSSCCC-SCCE----EE-------TT-EEEEECT----T---SE
T ss_pred ceEeCCEEEEEc----CCCEEEEEECCCCCEEEEEeCCCceE-cCCE----EE-------CC-EEEEEcC----C---Ce
Confidence 345678887754 34678999999998532 22111111 0011 01 11 3333221 1 15
Q ss_pred EEEEeCCCCc--ccccCCCCCCCcccccccceEEECCEEEEEecCCcEEEEEcCCC--eEeeEeCCCC--C-------CC
Q 015428 233 FEIYSSRSRS--WRTTDTICSEPDVLKLSINGFYMKGFVYWTSLSGAILVFDLKDE--QYGILPLPAR--S-------GP 299 (407)
Q Consensus 233 ~~vy~s~t~~--W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~~~~Il~fD~~~e--~~~~i~lP~~--~-------~~ 299 (407)
+..||..++. |+.....+. ........++..+|.+|.-+.++.|.+||..+. .|+. +.+.. . ..
T Consensus 155 l~~~d~~tG~~~W~~~~~~~~--~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~-~~~~~~~~~~~~~~~~~ 231 (376)
T 3q7m_A 155 LQALNEADGAVKWTVNLDMPS--LSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQ-RISQATGSTEIDRLSDV 231 (376)
T ss_dssp EEEEETTTCCEEEEEECCC-------CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEE-ECCC-----------CC
T ss_pred EEEEECCCCcEEEEEeCCCCc--eeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEE-ecccCCCCccccccccc
Confidence 7778887775 876543211 111123456777899888666789999999764 4543 33221 1 01
Q ss_pred CccEEEecCeEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEe-cCCEEEEEECCC
Q 015428 300 YGALTQMHGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIIL-LPNKVIAYHVKA 378 (407)
Q Consensus 300 ~~~l~~~~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~-~~~~l~~yd~~t 378 (407)
.......+|.+++.... ..+..+.. .+++-.|+.. .. ....+. ..++.|++. .+..++.+|.++
T Consensus 232 ~~~p~~~~~~v~~~~~~--g~l~~~d~-~tG~~~w~~~--~~---------~~~~~~-~~~~~l~~~~~~g~l~~~d~~t 296 (376)
T 3q7m_A 232 DTTPVVVNGVVFALAYN--GNLTALDL-RSGQIMWKRE--LG---------SVNDFI-VDGNRIYLVDQNDRVMALTIDG 296 (376)
T ss_dssp CCCCEEETTEEEEECTT--SCEEEEET-TTCCEEEEEC--CC---------CEEEEE-EETTEEEEEETTCCEEEEETTT
T ss_pred CCCcEEECCEEEEEecC--cEEEEEEC-CCCcEEeecc--CC---------CCCCce-EECCEEEEEcCCCeEEEEECCC
Confidence 22334456777776533 33333322 2222112111 11 111122 235556654 456899999999
Q ss_pred CeEEEe
Q 015428 379 QKMQVV 384 (407)
Q Consensus 379 ~~~~~l 384 (407)
++...-
T Consensus 297 G~~~w~ 302 (376)
T 3q7m_A 297 GVTLWT 302 (376)
T ss_dssp CCEEEE
T ss_pred CcEEEe
Confidence 886543
No 36
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=81.52 E-value=27 Score=30.61 Aligned_cols=185 Identities=8% Similarity=-0.003 Sum_probs=93.4
Q ss_pred CCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCcccccCCC
Q 015428 170 GNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRSWRTTDTI 249 (407)
Q Consensus 170 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~ 249 (407)
....++++||.++ ...+..+. ....++.+++. +. +++.... ...+.+|+..++..+.....
T Consensus 48 ~~~~i~~~~~~~~-~~~~~~~~-----~~~~~l~~~~d-----g~--l~v~~~~------~~~i~~~d~~~g~~~~~~~~ 108 (296)
T 3e5z_A 48 RQNRTWAWSDDGQ-LSPEMHPS-----HHQNGHCLNKQ-----GH--LIACSHG------LRRLERQREPGGEWESIADS 108 (296)
T ss_dssp GGTEEEEEETTSC-EEEEESSC-----SSEEEEEECTT-----CC--EEEEETT------TTEEEEECSTTCCEEEEECE
T ss_pred CCCEEEEEECCCC-eEEEECCC-----CCcceeeECCC-----Cc--EEEEecC------CCeEEEEcCCCCcEEEEeec
Confidence 4467899999998 55554322 12356778875 33 3332211 12578888888876654221
Q ss_pred CCCCcccccccceEEE--CCEEEEEec------------------CCcEEEEEcCCCeEeeEeCCCCCCCCccEEEe-cC
Q 015428 250 CSEPDVLKLSINGFYM--KGFVYWTSL------------------SGAILVFDLKDEQYGILPLPARSGPYGALTQM-HG 308 (407)
Q Consensus 250 ~~~~~~~~~~~~~v~~--~G~lYwl~~------------------~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~-~G 308 (407)
... ... .....+.+ +|.+|+... .+.|..||.. .++..+.-.. .....++.. +|
T Consensus 109 ~~~-~~~-~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~~~~gi~~s~dg 183 (296)
T 3e5z_A 109 FEG-KKL-NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR--VKPNGLAFLPSG 183 (296)
T ss_dssp ETT-EEC-CCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC--SSEEEEEECTTS
T ss_pred cCC-CCC-CCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC--CCCccEEECCCC
Confidence 110 000 01122333 588766421 3479999987 5554443111 111123332 57
Q ss_pred eEEEEeeeCCCceEEEEEcCCccc-eeeEeeeeecccccCcCCcceEEEee-cCCEEEEecCCEEEEEECCCCeEEEecc
Q 015428 309 ELCYMLPQIQDGECLIGVYGNLDM-SLKCVIPVEHEVLGETFSDCRVLTCV-NSDILIILLPNKVIAYHVKAQKMQVVSE 386 (407)
Q Consensus 309 ~L~~v~~~~~~~~w~l~~~~~~~W-~~~~~i~l~~~~~~~~~~~~~~~~~~-~g~~lll~~~~~l~~yd~~t~~~~~l~~ 386 (407)
++. +.......+|.....+.+.. .-...+ .. . .+....+++. +|. |++..+..+..||++++.++.+..
T Consensus 184 ~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~--~~---~--~~~p~~i~~d~~G~-l~v~~~~~v~~~~~~g~~~~~~~~ 254 (296)
T 3e5z_A 184 NLL-VSDTGDNATHRYCLNARGETEYQGVHF--TV---E--PGKTDGLRVDAGGL-IWASAGDGVHVLTPDGDELGRVLT 254 (296)
T ss_dssp CEE-EEETTTTEEEEEEECSSSCEEEEEEEE--CC---S--SSCCCSEEEBTTSC-EEEEETTEEEEECTTSCEEEEEEC
T ss_pred CEE-EEeCCCCeEEEEEECCCCcCcCCCeEe--eC---C--CCCCCeEEECCCCC-EEEEcCCeEEEECCCCCEEEEEEC
Confidence 665 44443445554433223332 112222 10 1 1222345554 555 455448899999999887777754
Q ss_pred c
Q 015428 387 T 387 (407)
Q Consensus 387 ~ 387 (407)
.
T Consensus 255 ~ 255 (296)
T 3e5z_A 255 P 255 (296)
T ss_dssp S
T ss_pred C
Confidence 3
No 37
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=77.07 E-value=35 Score=29.42 Aligned_cols=135 Identities=7% Similarity=-0.053 Sum_probs=73.4
Q ss_pred EEeecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEE
Q 015428 153 IRTTCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIF 232 (407)
Q Consensus 153 i~~s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~ 232 (407)
+.-..+|.+.+.. .....+++++| +++...++.+.. .....++.+++. +. +...... ...
T Consensus 146 i~~~~~g~l~v~~---~~~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~-----g~--l~v~~~~------~~~ 205 (299)
T 2z2n_A 146 ITLGSDNALWFTE---NQNNAIGRITE-SGDITEFKIPTP---ASGPVGITKGND-----DA--LWFVEII------GNK 205 (299)
T ss_dssp EEECTTSCEEEEE---TTTTEEEEECT-TCCEEEEECSST---TCCEEEEEECTT-----SS--EEEEETT------TTE
T ss_pred EEEcCCCCEEEEe---CCCCEEEEEcC-CCcEEEeeCCCC---CCcceeEEECCC-----CC--EEEEccC------Cce
Confidence 4445577777654 24567899999 888776533221 112356777765 33 2222211 125
Q ss_pred EEEEeCCCCcccccCCCCCCCcccccccceEEE--CCEEEEEe-cCCcEEEEEcCCCeEeeEeCCCCCCCCccEEEecCe
Q 015428 233 FEIYSSRSRSWRTTDTICSEPDVLKLSINGFYM--KGFVYWTS-LSGAILVFDLKDEQYGILPLPARSGPYGALTQMHGE 309 (407)
Q Consensus 233 ~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lYwl~-~~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~~G~ 309 (407)
+.+|+. ++........ ... ....++.+ +|.+|.-. ..+.|..||+ +.++..+.+|.....-..+..-+|+
T Consensus 206 i~~~~~-~g~~~~~~~~-~~~----~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~g~ 278 (299)
T 2z2n_A 206 IGRITT-SGEITEFKIP-TPN----ARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICFDGET 278 (299)
T ss_dssp EEEECT-TCCEEEEECS-STT----CCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEECSSC
T ss_pred EEEECC-CCcEEEEECC-CCC----CCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEecCCC
Confidence 677887 6666543211 010 11234555 57877655 3578999999 5677777776432221223334566
Q ss_pred EEEEe
Q 015428 310 LCYML 314 (407)
Q Consensus 310 L~~v~ 314 (407)
|++..
T Consensus 279 l~v~~ 283 (299)
T 2z2n_A 279 IWFAM 283 (299)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66654
No 38
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=76.40 E-value=40 Score=29.76 Aligned_cols=185 Identities=8% Similarity=-0.074 Sum_probs=88.4
Q ss_pred CCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCcccccCCC
Q 015428 170 GNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRSWRTTDTI 249 (407)
Q Consensus 170 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~ 249 (407)
....++.++| +++...+..+. ....++.+|+. ++ +++.... . ..+.+|+.. ++.+.....
T Consensus 65 ~~~~i~~~~~-~g~~~~~~~~~-----~~~~gl~~d~d-----G~--l~v~~~~---~---~~v~~~~~~-g~~~~~~~~ 124 (305)
T 3dr2_A 65 VGRRVLGWRE-DGTVDVLLDAT-----AFTNGNAVDAQ-----QR--LVHCEHG---R---RAITRSDAD-GQAHLLVGR 124 (305)
T ss_dssp TTTEEEEEET-TSCEEEEEESC-----SCEEEEEECTT-----SC--EEEEETT---T---TEEEEECTT-SCEEEEECE
T ss_pred CCCEEEEEeC-CCCEEEEeCCC-----CccceeeECCC-----CC--EEEEECC---C---CEEEEECCC-CCEEEEEec
Confidence 4567888898 66655443321 12356777765 33 3332211 1 145666664 555443211
Q ss_pred CCCCcccccccceEEE--CCEEEEEe----c--------------CCcEEEEEcCCCeEeeEeCCCCCCCCccEEEe-cC
Q 015428 250 CSEPDVLKLSINGFYM--KGFVYWTS----L--------------SGAILVFDLKDEQYGILPLPARSGPYGALTQM-HG 308 (407)
Q Consensus 250 ~~~~~~~~~~~~~v~~--~G~lYwl~----~--------------~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~-~G 308 (407)
.. .... ..-..+.+ +|.+|+.. . .+.|..||+.+.++..+. .. .....++.. +|
T Consensus 125 ~~-~~~~-~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~--~~p~gl~~spdg 199 (305)
T 3dr2_A 125 YA-GKRL-NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DL--DHPNGLAFSPDE 199 (305)
T ss_dssp ET-TEEC-SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EE--SSEEEEEECTTS
T ss_pred cC-CCcc-CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cC--CCCcceEEcCCC
Confidence 10 0000 00112222 68877631 1 257999999887776654 11 111123332 56
Q ss_pred e-EEEEeeeC----CCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEee-cCCEEEEecCCEEEEEECCCCeEE
Q 015428 309 E-LCYMLPQI----QDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCV-NSDILIILLPNKVIAYHVKAQKMQ 382 (407)
Q Consensus 309 ~-L~~v~~~~----~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~-~g~~lll~~~~~l~~yd~~t~~~~ 382 (407)
+ |+++.... ...+|.+...+.. ..-...+ .. . . .+....+.+. +|. |++.....|..||++++.+.
T Consensus 200 ~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~-~~--~-~--~~~pdgi~~d~~G~-lwv~~~~gv~~~~~~g~~~~ 271 (305)
T 3dr2_A 200 QTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHF-AS--V-P--DGLPDGFCVDRGGW-LWSSSGTGVCVFDSDGQLLG 271 (305)
T ss_dssp SEEEEEECCC---CCCEEEEEEEETTE-EEEEEEE-EC--C-S--SSCCCSEEECTTSC-EEECCSSEEEEECTTSCEEE
T ss_pred CEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEE-EE--C-C--CCCCCeEEECCCCC-EEEecCCcEEEECCCCCEEE
Confidence 5 55444321 1345554332222 1111111 10 0 1 1222344553 444 66666778999999888888
Q ss_pred Eeccc
Q 015428 383 VVSET 387 (407)
Q Consensus 383 ~l~~~ 387 (407)
.+...
T Consensus 272 ~~~~~ 276 (305)
T 3dr2_A 272 HIPTP 276 (305)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 77644
No 39
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=74.96 E-value=55 Score=30.58 Aligned_cols=197 Identities=9% Similarity=-0.024 Sum_probs=99.8
Q ss_pred ecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEE
Q 015428 156 TCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEI 235 (407)
Q Consensus 156 s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~v 235 (407)
|-+|-.++......+...++++|..|++...+.... .....+.+.|. +++-++... . .....+.+
T Consensus 187 Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~-----~~~~~~~~spd-----g~~la~~~~-~----~g~~~i~~ 251 (415)
T 2hqs_A 187 SPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP-----RHNGAPAFSPD-----GSKLAFALS-K----TGSLNLYV 251 (415)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCS-----SCEEEEEECTT-----SSEEEEEEC-T----TSSCEEEE
T ss_pred cCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCC-----CcccCEEEcCC-----CCEEEEEEe-c----CCCceEEE
Confidence 556654443321123368999999999887765432 13456777775 444333322 1 12346888
Q ss_pred EeCCCCcccccCCCCCCCcccccccceEEE--CCE-EEEEecCC---cEEEEEcCCCeEeeEeCCCCCCCCccEEE-ecC
Q 015428 236 YSSRSRSWRTTDTICSEPDVLKLSINGFYM--KGF-VYWTSLSG---AILVFDLKDEQYGILPLPARSGPYGALTQ-MHG 308 (407)
Q Consensus 236 y~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G~-lYwl~~~~---~Il~fD~~~e~~~~i~lP~~~~~~~~l~~-~~G 308 (407)
++..++..+.+..... ....+.+ +|. +++.+..+ .|..+|+.+.....+.... .....+.- -+|
T Consensus 252 ~d~~~~~~~~l~~~~~-------~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~spdG 322 (415)
T 2hqs_A 252 MDLASGQIRQVTDGRS-------NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEG--SQNQDADVSSDG 322 (415)
T ss_dssp EETTTCCEEECCCCSS-------CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSS--SEEEEEEECTTS
T ss_pred EECCCCCEEeCcCCCC-------cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCC--CcccCeEECCCC
Confidence 8998887655442211 0111222 453 55555422 6888899887644332211 11111222 256
Q ss_pred eEEEEeeeCC-CceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCCEEEEec-CC---EEEEEECCCCeEE
Q 015428 309 ELCYMLPQIQ-DGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSDILIILL-PN---KVIAYHVKAQKMQ 382 (407)
Q Consensus 309 ~L~~v~~~~~-~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll~~-~~---~l~~yd~~t~~~~ 382 (407)
+..++....+ .....+++...+.. ..+. .. .....+.+ .+|..|+... +. .|+.+|+.++..+
T Consensus 323 ~~l~~~~~~~g~~~i~~~d~~~~~~-----~~l~----~~--~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~ 391 (415)
T 2hqs_A 323 KFMVMVSSNGGQQHIAKQDLATGGV-----QVLS----ST--FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKA 391 (415)
T ss_dssp SEEEEEEECSSCEEEEEEETTTCCE-----EECC----CS--SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEE
T ss_pred CEEEEEECcCCceEEEEEECCCCCE-----EEec----CC--CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEE
Confidence 6444444321 12222333333321 1121 11 12233344 4677666543 22 7999999999988
Q ss_pred Eeccc
Q 015428 383 VVSET 387 (407)
Q Consensus 383 ~l~~~ 387 (407)
.+...
T Consensus 392 ~l~~~ 396 (415)
T 2hqs_A 392 RLPAT 396 (415)
T ss_dssp ECCCS
T ss_pred EeeCC
Confidence 88654
No 40
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=73.84 E-value=2.3 Score=26.43 Aligned_cols=27 Identities=19% Similarity=0.051 Sum_probs=23.0
Q ss_pred CCCCccccccCCCCchHHHHHhcCCCC
Q 015428 55 NFPGLVKLKKNIGLSDVTMEHVLPFLP 81 (407)
Q Consensus 55 ~~~~~~~~~~~~~Lpd~lle~IL~rLP 81 (407)
.-|+..+.+....||.|+.+|||+--.
T Consensus 11 ~lP~~VD~eVF~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 11 ALPEGVDQEVFKQLPADIQEEILSGKS 37 (48)
T ss_dssp SSCTTCCGGGTTTSCHHHHHHHTTCCC
T ss_pred cCCCCCCHHHHHHCcHHHHHHHHhcch
Confidence 557888999999999999999997644
No 41
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=72.33 E-value=55 Score=29.38 Aligned_cols=194 Identities=11% Similarity=-0.038 Sum_probs=99.6
Q ss_pred CceEEEeeec-ccCCeEEEEEcCcccceee-cCCC--CcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEE
Q 015428 158 NGLVCCQSVF-EVGNFFYYICNPVTKEWHV-LPQP--KFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFF 233 (407)
Q Consensus 158 ~GLll~~~~~-~~~~~~~~V~NP~T~~~~~-LP~~--~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~ 233 (407)
+|+..+..+. ......+.++||.|++... ++.. ....+ .....+.++. . ++...... .-.+
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg-~~~~~i~~~~-------~-~lyv~~~~------~~~v 66 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLG-DVAQSMVIRD-------G-IGWIVVNN------SHVI 66 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCB-SCEEEEEEET-------T-EEEEEEGG------GTEE
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccC-ccceEEEEEC-------C-EEEEEEcC------CCEE
Confidence 4555554321 1235789999999998754 2110 00001 1112334442 2 23333322 1268
Q ss_pred EEEeCCCCcc-cccCCCCCCCcccccccceEE-ECCEEEEEe-cCCcEEEEEcCCCeEe-eEeCCCCCC---CCccEEEe
Q 015428 234 EIYSSRSRSW-RTTDTICSEPDVLKLSINGFY-MKGFVYWTS-LSGAILVFDLKDEQYG-ILPLPARSG---PYGALTQM 306 (407)
Q Consensus 234 ~vy~s~t~~W-~~~~~~~~~~~~~~~~~~~v~-~~G~lYwl~-~~~~Il~fD~~~e~~~-~i~lP~~~~---~~~~l~~~ 306 (407)
.++|..++.- +.++.. . ....-++ -+|.+|... .++.|.++|+.+.+.. .++++.... .-..++..
T Consensus 67 ~viD~~t~~~~~~i~~~--~-----~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~ 139 (328)
T 3dsm_A 67 FAIDINTFKEVGRITGF--T-----SPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQY 139 (328)
T ss_dssp EEEETTTCCEEEEEECC--S-----SEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE
T ss_pred EEEECcccEEEEEcCCC--C-----CCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEE
Confidence 8899988764 222211 0 1112223 589998877 5789999999987764 567665211 11244456
Q ss_pred cCeEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEee-cCCEEEEecC-----------CEEEEE
Q 015428 307 HGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCV-NSDILIILLP-----------NKVIAY 374 (407)
Q Consensus 307 ~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~-~g~~lll~~~-----------~~l~~y 374 (407)
+|+|+++....+..+..+ +...+ .....+.+.. ....+.+. +|.+.+...+ ..++.+
T Consensus 140 ~~~lyv~~~~~~~~v~vi-D~~t~--~~~~~i~~g~--------~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~i 208 (328)
T 3dsm_A 140 GKYVYVNCWSYQNRILKI-DTETD--KVVDELTIGI--------QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRI 208 (328)
T ss_dssp TTEEEEEECTTCCEEEEE-ETTTT--EEEEEEECSS--------CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEE
T ss_pred CCEEEEEcCCCCCEEEEE-ECCCC--eEEEEEEcCC--------CccceEEcCCCCEEEEECCCccCCccccCCceEEEE
Confidence 788887754222334433 22222 2333343311 11223343 4443333322 479999
Q ss_pred ECCCCeEEEe
Q 015428 375 HVKAQKMQVV 384 (407)
Q Consensus 375 d~~t~~~~~l 384 (407)
|++++++...
T Consensus 209 d~~t~~v~~~ 218 (328)
T 3dsm_A 209 DAETFTVEKQ 218 (328)
T ss_dssp ETTTTEEEEE
T ss_pred ECCCCeEEEE
Confidence 9999987743
No 42
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=69.35 E-value=88 Score=30.58 Aligned_cols=192 Identities=14% Similarity=0.075 Sum_probs=89.5
Q ss_pred CCeEEEEEcCccccee---ecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCccccc
Q 015428 170 GNFFYYICNPVTKEWH---VLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRSWRTT 246 (407)
Q Consensus 170 ~~~~~~V~NP~T~~~~---~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~W~~~ 246 (407)
....+.++|..+++.. .++... ....++++|. ++|-+++.... ..+.|+|..++.=...
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~~~~------~~~~~~~spd-----g~~l~va~~~~-------~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIGAAP------FLHDGGWDSS-----HRYFMTAANNS-------NKVAVIDSKDRRLSAL 361 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEECCS------SCCCEEECTT-----SCEEEEEEGGG-------TEEEEEETTTTEEEEE
T ss_pred CCCeEEEEEecCCCcceeEEeccCc------CccCceECCC-----CCEEEEEecCC-------CeEEEEECCCCeEEEe
Confidence 4567777777665432 222111 1124577875 66655543322 2677899988753221
Q ss_pred CCCCCCCcccccccce-EEE--C-CEEEEEec--CCcEEEEEcCCC-----eEeeEe-CCCCCCCCccEEE-ecCeEEEE
Q 015428 247 DTICSEPDVLKLSING-FYM--K-GFVYWTSL--SGAILVFDLKDE-----QYGILP-LPARSGPYGALTQ-MHGELCYM 313 (407)
Q Consensus 247 ~~~~~~~~~~~~~~~~-v~~--~-G~lYwl~~--~~~Il~fD~~~e-----~~~~i~-lP~~~~~~~~l~~-~~G~L~~v 313 (407)
..... .+....+ .++ + |.+|.... ++.|..+|+.++ .|.++. ++-.......+.. -+|+..++
T Consensus 362 --i~~g~--~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v 437 (543)
T 1nir_A 362 --VDVGK--TPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYV 437 (543)
T ss_dssp --EECSS--SBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEE
T ss_pred --eccCC--CCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEE
Confidence 11110 0111112 122 3 55544432 478999999873 255442 2221111112222 25655555
Q ss_pred ee--eCC---CceEEEEEcCCccceeeEeeeeecccccCcCCc--ceEEEe-ecCCEEEEec------CCEEEEEECCCC
Q 015428 314 LP--QIQ---DGECLIGVYGNLDMSLKCVIPVEHEVLGETFSD--CRVLTC-VNSDILIILL------PNKVIAYHVKAQ 379 (407)
Q Consensus 314 ~~--~~~---~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~--~~~~~~-~~g~~lll~~------~~~l~~yd~~t~ 379 (407)
.. ..+ .....+++..+.+- ....+.+. ..-|...+. ..-+.| .+|+.|++.. +..|..||.+|.
T Consensus 438 ~~~~~~~~~~~~~v~v~d~~~~~~-~~~~~~v~-~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 438 DTTFNPDARISQSVAVFDLKNLDA-KYQVLPIA-EWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp CCTTCSSHHHHTCEEEEETTCTTS-CCEEECHH-HHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred ecCCCCCcccCceEEEEECCCCCC-CeEEeech-hhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCc
Confidence 44 111 22333344333331 11333331 111111112 223345 4788777642 377999999999
Q ss_pred eEEEec
Q 015428 380 KMQVVS 385 (407)
Q Consensus 380 ~~~~l~ 385 (407)
++.+.-
T Consensus 516 ~~~~~i 521 (543)
T 1nir_A 516 KLKAVV 521 (543)
T ss_dssp EEEEEE
T ss_pred eEEEee
Confidence 976553
No 43
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=67.27 E-value=77 Score=29.12 Aligned_cols=188 Identities=8% Similarity=0.040 Sum_probs=92.4
Q ss_pred ecCceEEEeeecccCCeEEEEEcCcccceee-cCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEE
Q 015428 156 TCNGLVCCQSVFEVGNFFYYICNPVTKEWHV-LPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFE 234 (407)
Q Consensus 156 s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~ 234 (407)
+.+|.+++... ....+.+||+-+++... ++.. ......+.++|. +.+-++. ... + ..+.
T Consensus 178 ~~~~~~~~s~~---~d~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~-----~~~l~~~-~~~---~---~~i~ 237 (433)
T 3bws_A 178 PEHNELWVSQM---QANAVHVFDLKTLAYKATVDLT-----GKWSKILLYDPI-----RDLVYCS-NWI---S---EDIS 237 (433)
T ss_dssp GGGTEEEEEEG---GGTEEEEEETTTCCEEEEEECS-----SSSEEEEEEETT-----TTEEEEE-ETT---T---TEEE
T ss_pred cCCCEEEEEEC---CCCEEEEEECCCceEEEEEcCC-----CCCeeEEEEcCC-----CCEEEEE-ecC---C---CcEE
Confidence 55777776653 45789999998876543 3311 123356677775 4433222 211 1 1688
Q ss_pred EEeCCCCcccccCCCCCCCcccccccceEEE--CCE-EEEEe--------cCCcEEEEEcCCCeEee-EeCCCCCCCCcc
Q 015428 235 IYSSRSRSWRTTDTICSEPDVLKLSINGFYM--KGF-VYWTS--------LSGAILVFDLKDEQYGI-LPLPARSGPYGA 302 (407)
Q Consensus 235 vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G~-lYwl~--------~~~~Il~fD~~~e~~~~-i~lP~~~~~~~~ 302 (407)
+||.+++.....-. .... ..++.+ +|. ++... .++.|..||+.+.+... +..+.. ...
T Consensus 238 ~~d~~~~~~~~~~~--~~~~-----~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~---~~~ 307 (433)
T 3bws_A 238 VIDRKTKLEIRKTD--KIGL-----PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN---KRH 307 (433)
T ss_dssp EEETTTTEEEEECC--CCSE-----EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC---EEE
T ss_pred EEECCCCcEEEEec--CCCC-----ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC---cce
Confidence 89988875432211 1110 122333 453 43333 24588899998765432 221211 111
Q ss_pred EEE-ecCe-EEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCCEEEEecC-----------
Q 015428 303 LTQ-MHGE-LCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSDILIILLP----------- 368 (407)
Q Consensus 303 l~~-~~G~-L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll~~~----------- 368 (407)
+.. -+|+ |++.... + ....+++...+ .....+.. + .....+++ .+|+.++....
T Consensus 308 ~~~~~~g~~l~~~~~~-~-~~v~v~d~~~~--~~~~~~~~-----~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 375 (433)
T 3bws_A 308 IVSGNTENKIYVSDMC-C-SKIEVYDLKEK--KVQKSIPV-----F---DKPNTIALSPDGKYLYVSCRGPNHPTEGYLK 375 (433)
T ss_dssp EEECSSTTEEEEEETT-T-TEEEEEETTTT--EEEEEEEC-----S---SSEEEEEECTTSSEEEEEECCCCCTTTCTTS
T ss_pred EEECCCCCEEEEEecC-C-CEEEEEECCCC--cEEEEecC-----C---CCCCeEEEcCCCCEEEEEecCCCcccccccc
Confidence 222 2453 4333222 2 22233433322 22222221 1 12334455 35666666432
Q ss_pred -----CEEEEEECCCCeEEEec
Q 015428 369 -----NKVIAYHVKAQKMQVVS 385 (407)
Q Consensus 369 -----~~l~~yd~~t~~~~~l~ 385 (407)
+.++.||+++++.....
T Consensus 376 ~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 376 KGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp CCSSCCEEEEEETTTTEEEEEE
T ss_pred ccccceEEEEEECCCCcEEEEe
Confidence 38999999998866544
No 44
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=67.06 E-value=65 Score=28.20 Aligned_cols=57 Identities=12% Similarity=0.092 Sum_probs=32.7
Q ss_pred EEEEEeCCCCc--ccccCCCCCCCcccccccceEEECCEEEEEecCCcEEEEEcCCCeEeeEeCC
Q 015428 232 FFEIYSSRSRS--WRTTDTICSEPDVLKLSINGFYMKGFVYWTSLSGAILVFDLKDEQYGILPLP 294 (407)
Q Consensus 232 ~~~vy~s~t~~--W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~~~~Il~fD~~~e~~~~i~lP 294 (407)
.+.++|.+++. |+......... ....+.-+|.++. +....|.+||...+.-..+..|
T Consensus 16 ~v~~~d~~tG~~~w~~~~~~~~~~-----~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~~~ 74 (276)
T 3no2_A 16 KIAIINKDTKEIVWEYPLEKGWEC-----NSVAATKAGEILF-SYSKGAKMITRDGRELWNIAAP 74 (276)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCC-----CEEEECTTSCEEE-ECBSEEEEECTTSCEEEEEECC
T ss_pred EEEEEECCCCeEEEEeCCCccCCC-----cCeEECCCCCEEE-eCCCCEEEECCCCCEEEEEcCC
Confidence 66788877764 77643210001 1112223777766 5567899999955444445665
No 45
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=65.49 E-value=95 Score=31.39 Aligned_cols=117 Identities=8% Similarity=-0.056 Sum_probs=61.2
Q ss_pred cceEEECCEEEEEecCCcEEEEEcCC--CeEeeEeCCCCC---------CCCccEEEecCeEEEEeeeCCCceEEEEEcC
Q 015428 260 INGFYMKGFVYWTSLSGAILVFDLKD--EQYGILPLPARS---------GPYGALTQMHGELCYMLPQIQDGECLIGVYG 328 (407)
Q Consensus 260 ~~~v~~~G~lYwl~~~~~Il~fD~~~--e~~~~i~lP~~~---------~~~~~l~~~~G~L~~v~~~~~~~~w~l~~~~ 328 (407)
..++..+|.+|..+..+.|.++|..+ +.|+. +.+... .....++..+|+|++.... ..+..+. ..
T Consensus 71 ~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d--g~l~alD-~~ 146 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTY-DPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD--GRLIALD-AA 146 (677)
T ss_dssp CCCEEETTEEEEECGGGCEEEEETTTTEEEEEE-CCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT--SEEEEEE-TT
T ss_pred eCCEEECCEEEEECCCCeEEEEECCCCcEEEEE-cCCCCccccccccccCCCCCceEECCEEEEEcCC--CEEEEEE-CC
Confidence 46788999999988888999999876 46654 322210 1122455567777765433 3333332 22
Q ss_pred CccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec-------CCEEEEEECCCCeEEEe
Q 015428 329 NLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL-------PNKVIAYHVKAQKMQVV 384 (407)
Q Consensus 329 ~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~-------~~~l~~yd~~t~~~~~l 384 (407)
+++-.|+........ .+. .....|+ ..++.|++.. +..++.||.+|++...-
T Consensus 147 tG~~~W~~~~~~~~~-~~~-~~~~~p~--v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 147 TGKEVWHQNTFEGQK-GSL-TITGAPR--VFKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp TCCEEEEEETTTTCC-SSC-BCCSCCE--EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCCEEeeecCCcCcC-cCc-ccccCcE--EECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 222112211110000 000 0001122 2356666643 36799999999986643
No 46
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=65.12 E-value=72 Score=31.85 Aligned_cols=31 Identities=10% Similarity=0.104 Sum_probs=25.2
Q ss_pred cceEEECCEEEEEec-CCcEEEEEc-CC--CeEee
Q 015428 260 INGFYMKGFVYWTSL-SGAILVFDL-KD--EQYGI 290 (407)
Q Consensus 260 ~~~v~~~G~lYwl~~-~~~Il~fD~-~~--e~~~~ 290 (407)
..++..+|.+|..+. ++.|.++|. .+ +.|+.
T Consensus 56 ~tP~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~ 90 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPNNTFALGLDDPGTILWQD 90 (599)
T ss_dssp SCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEE
T ss_pred eccEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEE
Confidence 467889999999887 789999999 54 46755
No 47
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=64.70 E-value=1.3e+02 Score=30.75 Aligned_cols=197 Identities=9% Similarity=0.042 Sum_probs=94.2
Q ss_pred ecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEE
Q 015428 156 TCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEI 235 (407)
Q Consensus 156 s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~v 235 (407)
..+|-|.+.. ....++++||-+++...+..+... .......+..|+. +. + -++.. ...+..
T Consensus 371 d~~g~lWigt----~~~Gl~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~d~~-----g~--l-Wigt~------~~Gl~~ 431 (781)
T 3v9f_A 371 DGQGKLWIGT----DGGGINVFENGKRVAIYNKENREL-LSNSVLCSLKDSE-----GN--L-WFGTY------LGNISY 431 (781)
T ss_dssp CTTSCEEEEE----BSSCEEEEETTEEEEECC-----C-CCSBEEEEEECTT-----SC--E-EEEET------TEEEEE
T ss_pred cCCCCEEEEe----CCCcEEEEECCCCeEEEccCCCCC-CCcceEEEEECCC-----CC--E-EEEec------cCCEEE
Confidence 3456666643 124578889988877665322111 1123344555543 22 1 12211 125778
Q ss_pred EeCCCCcccccCCCCCCCcccccccceEEE--CCEEEEEecCCcEEEEEcCCCeEeeEeCCCCCC---CC-ccEEE-ecC
Q 015428 236 YSSRSRSWRTTDTICSEPDVLKLSINGFYM--KGFVYWTSLSGAILVFDLKDEQYGILPLPARSG---PY-GALTQ-MHG 308 (407)
Q Consensus 236 y~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lYwl~~~~~Il~fD~~~e~~~~i~lP~~~~---~~-~~l~~-~~G 308 (407)
|+..++.++......... ....+++. +|.+ |++....|..||..+.+|..+....... .. ..+.+ .+|
T Consensus 432 ~~~~~~~~~~~~~~~~~~----~~v~~i~~d~~g~l-wigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g 506 (781)
T 3v9f_A 432 YNTRLKKFQIIELEKNEL----LDVRVFYEDKNKKI-WIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEG 506 (781)
T ss_dssp ECSSSCEEEECCSTTTCC----CCEEEEEECTTSEE-EEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTC
T ss_pred EcCCCCcEEEeccCCCCC----CeEEEEEECCCCCE-EEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCC
Confidence 888888887654310110 11234444 4665 5555588999999999887765332111 00 11211 245
Q ss_pred eEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEecCCEE-EEEECCCCeEEEec
Q 015428 309 ELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILLPNKV-IAYHVKAQKMQVVS 385 (407)
Q Consensus 309 ~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~~~~l-~~yd~~t~~~~~l~ 385 (407)
+|.+.+.. ..+..+. .+... +++ +.... +.....+..+....++.|.+.+...+ +.||.++++++...
T Consensus 507 ~lWigt~~--~Gl~~~~-~~~~~--~~~-~~~~~---~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~~~~~~~~~ 575 (781)
T 3v9f_A 507 RFWIGTFG--GGVGIYT-PDMQL--VRK-FNQYE---GFCSNTINQIYRSSKGQMWLATGEGLVCFPSARNFDYQVFQ 575 (781)
T ss_dssp CEEEEESS--SCEEEEC-TTCCE--EEE-ECTTT---TCSCSCEEEEEECTTSCEEEEETTEEEEESCTTTCCCEEEC
T ss_pred CEEEEEcC--CCEEEEe-CCCCe--EEE-ccCCC---CCCCCeeEEEEECCCCCEEEEECCCceEEECCCCCcEEEcc
Confidence 55554432 1121111 11111 111 11100 10011223333333455666666788 99999999887764
No 48
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=62.88 E-value=1.2e+02 Score=29.85 Aligned_cols=116 Identities=9% Similarity=0.049 Sum_probs=61.8
Q ss_pred cceEEECCEEEEEec-CCcEEEEEc-CC--CeEeeEeCCCCC---------CCCccEEEecCeEEEEeeeCCCceEEEEE
Q 015428 260 INGFYMKGFVYWTSL-SGAILVFDL-KD--EQYGILPLPARS---------GPYGALTQMHGELCYMLPQIQDGECLIGV 326 (407)
Q Consensus 260 ~~~v~~~G~lYwl~~-~~~Il~fD~-~~--e~~~~i~lP~~~---------~~~~~l~~~~G~L~~v~~~~~~~~w~l~~ 326 (407)
..++..+|.+|..+. ++.|.++|. .+ +.|+. +++... .....++..+|++++.... ..+..+..
T Consensus 56 ~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d--g~l~alD~ 132 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN--GHLLALDA 132 (571)
T ss_dssp SCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT--SEEEEEET
T ss_pred cccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeCC--CEEEEEEC
Confidence 467889999999887 789999998 54 46654 333211 1122355567777766432 33333332
Q ss_pred cCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec-------CCEEEEEECCCCeEEEe
Q 015428 327 YGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL-------PNKVIAYHVKAQKMQVV 384 (407)
Q Consensus 327 ~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~-------~~~l~~yd~~t~~~~~l 384 (407)
.+++-.|+.. +...-.+. .....|+. .++.|++.. +..++.||.+|++...-
T Consensus 133 -~tG~~~W~~~--~~~~~~~~-~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 133 -KTGKINWEVE--VCDPKVGS-TLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp -TTCCEEEEEE--CCCGGGTC-BCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred -CCCCEEEEec--CCCCCccc-eeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 2222122221 11100000 00112221 245666643 46899999999886543
No 49
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=62.15 E-value=33 Score=34.81 Aligned_cols=115 Identities=11% Similarity=0.019 Sum_probs=60.7
Q ss_pred cceEEECCEEEEEecCCcEEEEEcCC--CeEeeEeCCCCC---------CCCccEEEecCeEEEEeeeCCCceEEEEE-c
Q 015428 260 INGFYMKGFVYWTSLSGAILVFDLKD--EQYGILPLPARS---------GPYGALTQMHGELCYMLPQIQDGECLIGV-Y 327 (407)
Q Consensus 260 ~~~v~~~G~lYwl~~~~~Il~fD~~~--e~~~~i~lP~~~---------~~~~~l~~~~G~L~~v~~~~~~~~w~l~~-~ 327 (407)
..++..+|.+|..+..+.|.++|..+ +.|+. +.+... .....++..+|++++.... ..+..+.. .
T Consensus 60 ~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d--g~l~alD~~t 136 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSWSRVIAVDAASGKELWRY-DPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD--GRLIALDAKT 136 (668)
T ss_dssp CCCEEETTEEEEEEGGGEEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT--SEEEEEETTT
T ss_pred cCCEEECCEEEEECCCCeEEEEECCCChhceEE-CCCCCccccccccccCCccceEEECCEEEEEcCC--CEEEEEECCC
Confidence 46788999999998888999999865 46764 222211 0112345567777665432 33333321 1
Q ss_pred CCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec-------CCEEEEEECCCCeEEEe
Q 015428 328 GNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL-------PNKVIAYHVKAQKMQVV 384 (407)
Q Consensus 328 ~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~-------~~~l~~yd~~t~~~~~l 384 (407)
+...|.. ... ....... ....|+ ..++.|++.. ...++.||.+|++...-
T Consensus 137 G~~~W~~--~~~-~~~~~~~--~~~~P~--v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 137 GKAIWSQ--QTT-DPAKPYS--ITGAPR--VVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp CCEEEEE--ECS-CTTSSCB--CCSCCE--EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEeeee--ccC-CCCCcce--ecCCCE--EECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 2223322 111 0000000 001122 2345566643 26799999999986543
No 50
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=60.05 E-value=87 Score=27.24 Aligned_cols=106 Identities=10% Similarity=0.115 Sum_probs=60.9
Q ss_pred EEECCEEEEEecC---CcEEEEEcCCCeE-eeEeCCCCCCCCccEEEecCeEEEEeeeCCCceEEEEEcCCccceeeEee
Q 015428 263 FYMKGFVYWTSLS---GAILVFDLKDEQY-GILPLPARSGPYGALTQMHGELCYMLPQIQDGECLIGVYGNLDMSLKCVI 338 (407)
Q Consensus 263 v~~~G~lYwl~~~---~~Il~fD~~~e~~-~~i~lP~~~~~~~~l~~~~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i 338 (407)
.+.+|.||.-+.. ..|..+|+.+.+- ..+++|...- ..-+...+++|+++... +..+|++. ...-.....|
T Consensus 27 ~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f-geGi~~~~~~ly~ltw~-~~~v~v~D---~~tl~~~~ti 101 (243)
T 3mbr_X 27 FYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYF-GAGIVAWRDRLIQLTWR-NHEGFVYD---LATLTPRARF 101 (243)
T ss_dssp EEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCC-EEEEEEETTEEEEEESS-SSEEEEEE---TTTTEEEEEE
T ss_pred EEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcc-eeEEEEeCCEEEEEEee-CCEEEEEE---CCcCcEEEEE
Confidence 4556788776543 4899999998655 6677876432 12355567888887643 23344322 2222344444
Q ss_pred eeecccccCcCCcceEEEeecCCEEEEec-CCEEEEEECCCCeEE
Q 015428 339 PVEHEVLGETFSDCRVLTCVNSDILIILL-PNKVIAYHVKAQKMQ 382 (407)
Q Consensus 339 ~l~~~~~~~~~~~~~~~~~~~g~~lll~~-~~~l~~yd~~t~~~~ 382 (407)
..+ +.-..+. .+++.+++.. ...|..+|++|.+..
T Consensus 102 ~~~--------~~Gwglt-~dg~~L~vSdgs~~l~~iDp~t~~~~ 137 (243)
T 3mbr_X 102 RYP--------GEGWALT-SDDSHLYMSDGTAVIRKLDPDTLQQV 137 (243)
T ss_dssp ECS--------SCCCEEE-ECSSCEEEECSSSEEEEECTTTCCEE
T ss_pred eCC--------CCceEEe-eCCCEEEEECCCCeEEEEeCCCCeEE
Confidence 432 1112222 3556666654 367888998886644
No 51
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=58.14 E-value=1.6e+02 Score=29.74 Aligned_cols=115 Identities=14% Similarity=0.091 Sum_probs=60.0
Q ss_pred cceEEECCEEEEEecCCcEEEEEcCC--CeEeeEeCCCCC---------CCCccEEEecCeEEEEeeeCCCceEEEEE-c
Q 015428 260 INGFYMKGFVYWTSLSGAILVFDLKD--EQYGILPLPARS---------GPYGALTQMHGELCYMLPQIQDGECLIGV-Y 327 (407)
Q Consensus 260 ~~~v~~~G~lYwl~~~~~Il~fD~~~--e~~~~i~lP~~~---------~~~~~l~~~~G~L~~v~~~~~~~~w~l~~-~ 327 (407)
..++..+|.+|..+..+.|.++|..+ +.|+. +.+... .....++..+|+|++...+ ..+..+.. .
T Consensus 64 ~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d--g~l~AlDa~T 140 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPFSVVYALDARDGRLIWKY-DPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD--GRLEAIDAKT 140 (689)
T ss_dssp CCCEEETTEEEEECGGGCEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT--SEEEEEETTT
T ss_pred ecCEEECCEEEEEcCCCeEEEEECCCCceeEEE-cCCCCccccccccccCCCCccEEECCEEEEEccC--CEEEEEECCC
Confidence 46788999999988888999999865 56764 322211 1122345567777665533 23333321 1
Q ss_pred CCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec-------CCEEEEEECCCCeEEE
Q 015428 328 GNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL-------PNKVIAYHVKAQKMQV 383 (407)
Q Consensus 328 ~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~-------~~~l~~yd~~t~~~~~ 383 (407)
+...|... .......... ....|+ ..++.|++.. +..++.||.+|++...
T Consensus 141 G~~~W~~~--~~~~~~~~~~--~~~sP~--v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 141 GQRAWSVD--TRADHKRSYT--ITGAPR--VVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp CCEEEEEE--CCSCTTSCCB--CCSCCE--EETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred CCEeeeec--CcCCCCCCcc--ccCCcE--EECCEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 22223221 1101000000 011122 1245556542 3679999999998553
No 52
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=57.55 E-value=95 Score=26.89 Aligned_cols=104 Identities=11% Similarity=0.021 Sum_probs=53.5
Q ss_pred CeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCccccc-CCC
Q 015428 171 NFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRSWRTT-DTI 249 (407)
Q Consensus 171 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~W~~~-~~~ 249 (407)
...++++||.+++...+..+..........++.+++. .+ ++...... + .+.+|+.. +..+.. ...
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~----~g--~l~v~~~~---~----~l~~~d~~-g~~~~~~~~~ 110 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRD----AN--QLFVADMR---L----GLLVVQTD-GTFEEIAKKD 110 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSS----SS--EEEEEETT---T----EEEEEETT-SCEEECCSBC
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecC----CC--cEEEEECC---C----CEEEEeCC-CCEEEEEecc
Confidence 3578999999998876543211000112356667754 12 23332211 1 57778887 666544 221
Q ss_pred CCCCcccccccceEEE--CCEEEEEecC----------------CcEEEEEcCCCeEeeE
Q 015428 250 CSEPDVLKLSINGFYM--KGFVYWTSLS----------------GAILVFDLKDEQYGIL 291 (407)
Q Consensus 250 ~~~~~~~~~~~~~v~~--~G~lYwl~~~----------------~~Il~fD~~~e~~~~i 291 (407)
..... . .....+.+ +|.+|+.... +.|..+|.. .++..+
T Consensus 111 ~~~~~-~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 111 SEGRR-M-QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp TTSCB-C-BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred CCCcc-c-cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 11100 0 11234444 5887765532 479999987 555443
No 53
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=57.16 E-value=1.5e+02 Score=29.15 Aligned_cols=189 Identities=9% Similarity=-0.029 Sum_probs=94.2
Q ss_pred eEEEEEcCcc------cceeecC-CCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCC-CCc-
Q 015428 172 FFYYICNPVT------KEWHVLP-QPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSR-SRS- 242 (407)
Q Consensus 172 ~~~~V~NP~T------~~~~~LP-~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~-t~~- 242 (407)
..++++|..+ ++.+.|. ... .......+.|. +++-++.-............+.+++.. ++.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~SpD-----G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~ 230 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAH-----RFVTGPRLSPD-----GRQAVWLAWDHPRMPWEGTELKTARVTEDGRF 230 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCS-----SEECCCEECTT-----SSEEEEEEECTTCCTTTCEEEEEEEECTTSCE
T ss_pred eEEEEEECCCCccccCCceeEEEecCC-----CcccCceECCC-----CCEEEEEECCCCCCCCCCcEEEEEEECCCCcc
Confidence 5799999999 7777776 322 12223445554 444333322211001134678888988 573
Q ss_pred --ccccCCCCCCCcccccccceEEE-CCEEEEEecC-C--cEEEEEcCCCeEeeEe-CCCCCC---C---CccEEEe-cC
Q 015428 243 --WRTTDTICSEPDVLKLSINGFYM-KGFVYWTSLS-G--AILVFDLKDEQYGILP-LPARSG---P---YGALTQM-HG 308 (407)
Q Consensus 243 --W~~~~~~~~~~~~~~~~~~~v~~-~G~lYwl~~~-~--~Il~fD~~~e~~~~i~-lP~~~~---~---~~~l~~~-~G 308 (407)
.+.+.... .. ......+. +|.+|+.+.. + .|..+|+.+.++..+. ...... . ...+... +|
T Consensus 231 ~~~~~l~~~~-~~----~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~ 305 (662)
T 3azo_A 231 ADTRTLLGGP-EE----AIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANG 305 (662)
T ss_dssp EEEEEEEEET-TB----CEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTS
T ss_pred cccEEeCCCC-Cc----eEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCC
Confidence 33322100 00 01122222 7888887753 3 7999999777765542 111110 0 1234444 67
Q ss_pred eEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEE-EeecCCEEEEec-C---CEEEEEECCCCeEEE
Q 015428 309 ELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVL-TCVNSDILIILL-P---NKVIAYHVKAQKMQV 383 (407)
Q Consensus 309 ~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~-~~~~g~~lll~~-~---~~l~~yd~~t~~~~~ 383 (407)
++.+........+|.+.. +.+. . +.+..+ .+.+..+ .+..+.+++... . ..++.+|+.+++.+.
T Consensus 306 ~~~~~~~~~~~~l~~~d~-~~~~--~-~~l~~~-------~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~ 374 (662)
T 3azo_A 306 LIAVVHGKGAAVLGILDP-ESGE--L-VDAAGP-------WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRART 374 (662)
T ss_dssp CEEEEEBSSSCEEEEEET-TTTE--E-EECCSS-------CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred EEEEEEEcCccEEEEEEC-CCCc--E-EEecCC-------CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEE
Confidence 776665542245665532 2222 1 222111 1223344 333333444432 2 369999999999888
Q ss_pred ecc
Q 015428 384 VSE 386 (407)
Q Consensus 384 l~~ 386 (407)
+..
T Consensus 375 l~~ 377 (662)
T 3azo_A 375 IGA 377 (662)
T ss_dssp EES
T ss_pred eec
Confidence 753
No 54
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=56.17 E-value=1.1e+02 Score=27.13 Aligned_cols=147 Identities=14% Similarity=0.167 Sum_probs=68.8
Q ss_pred eEEEEEEeCCCCcccccCCCCCCCcccccccceEEECCEEEEEec---CCcEEEEEcCCCeEeeEeC-CCCCCCCccEEE
Q 015428 230 IIFFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYWTSL---SGAILVFDLKDEQYGILPL-PARSGPYGALTQ 305 (407)
Q Consensus 230 ~~~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~---~~~Il~fD~~~e~~~~i~l-P~~~~~~~~l~~ 305 (407)
...+..++..++.++........... ..-.+.-+|.+|.... ++.|..||+.+.....+.. +.....-..++.
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~~~~~p---~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLAATQNP---TYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEEECSCC---CCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CEEEEEEcCCCCeEEEeeeeeccCCc---ceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 34556667777877654321100000 0011122688887765 3689999998877766542 222222223443
Q ss_pred e-cCeEEEEeeeCC--CceEEEEEcCCccceeeEeeeeecccccC----cCCcceEEEe-ecCCEEEEe-c-CCEEEEEE
Q 015428 306 M-HGELCYMLPQIQ--DGECLIGVYGNLDMSLKCVIPVEHEVLGE----TFSDCRVLTC-VNSDILIIL-L-PNKVIAYH 375 (407)
Q Consensus 306 ~-~G~L~~v~~~~~--~~~w~l~~~~~~~W~~~~~i~l~~~~~~~----~~~~~~~~~~-~~g~~lll~-~-~~~l~~yd 375 (407)
. +|+..++....+ ..+|.+.. ++.......+.... .+. .......+++ .+|+ +++. . ...+..||
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~--~g~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAA--DGALTLTDTVQHSG--HGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYN 168 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECT--TSCEEEEEEEECCC--CCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEE
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCC--CCCeeecceeecCC--CCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEE
Confidence 3 576444444322 23444322 22222222221110 010 0011233455 3666 4543 2 46788999
Q ss_pred CC-CCeEEEe
Q 015428 376 VK-AQKMQVV 384 (407)
Q Consensus 376 ~~-t~~~~~l 384 (407)
++ ++++..+
T Consensus 169 ~~~~g~~~~~ 178 (347)
T 3hfq_A 169 VSDAGQLSEQ 178 (347)
T ss_dssp ECTTSCEEEE
T ss_pred ECCCCcEEEe
Confidence 88 6666544
No 55
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=56.10 E-value=1.1e+02 Score=27.22 Aligned_cols=195 Identities=10% Similarity=-0.022 Sum_probs=92.6
Q ss_pred ecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEE
Q 015428 156 TCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEI 235 (407)
Q Consensus 156 s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~v 235 (407)
..+|.+++... ....++++||.+++...+..+. ...++++++. +.+ ++.. . + .+.+
T Consensus 58 ~~~~~l~~~d~---~~~~i~~~d~~~~~~~~~~~~~------~v~~i~~~~d-----g~l--~v~~-~---~----gl~~ 113 (326)
T 2ghs_A 58 PASGTAWWFNI---LERELHELHLASGRKTVHALPF------MGSALAKISD-----SKQ--LIAS-D---D----GLFL 113 (326)
T ss_dssp TTTTEEEEEEG---GGTEEEEEETTTTEEEEEECSS------CEEEEEEEET-----TEE--EEEE-T---T----EEEE
T ss_pred CCCCEEEEEEC---CCCEEEEEECCCCcEEEEECCC------cceEEEEeCC-----CeE--EEEE-C---C----CEEE
Confidence 33466666542 3467899999998876654321 2345667664 332 2222 1 1 3778
Q ss_pred EeCCCCcccccCCCCCCCcccccccceEEE--CCEEEEEec-------CCcEEEEEcCCCeEeeEeCCCCCCCCccEEEe
Q 015428 236 YSSRSRSWRTTDTICSEPDVLKLSINGFYM--KGFVYWTSL-------SGAILVFDLKDEQYGILPLPARSGPYGALTQM 306 (407)
Q Consensus 236 y~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lYwl~~-------~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~ 306 (407)
|+..++..+........... .....+.+ +|.+|+-.. ...|..+| +.++..+.- .......++..
T Consensus 114 ~d~~~g~~~~~~~~~~~~~~--~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s 187 (326)
T 2ghs_A 114 RDTATGVLTLHAELESDLPG--NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFS 187 (326)
T ss_dssp EETTTCCEEEEECSSTTCTT--EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEEC
T ss_pred EECCCCcEEEEeeCCCCCCC--CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEc
Confidence 89888887654322111100 01122333 577755432 25788898 455554421 11111123333
Q ss_pred -cCe-EEEEeeeCCCceEEEEEc-CCc-cceeeEee-eeecccccCcCCcceEEEee-cCCEEEEec-CCEEEEEECCCC
Q 015428 307 -HGE-LCYMLPQIQDGECLIGVY-GNL-DMSLKCVI-PVEHEVLGETFSDCRVLTCV-NSDILIILL-PNKVIAYHVKAQ 379 (407)
Q Consensus 307 -~G~-L~~v~~~~~~~~w~l~~~-~~~-~W~~~~~i-~l~~~~~~~~~~~~~~~~~~-~g~~lll~~-~~~l~~yd~~t~ 379 (407)
+|+ |+++ ......+|..... ..+ ...-...+ .+. ...+....+.+. +|.+.+-.. ...|..||+.++
T Consensus 188 ~dg~~lyv~-~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~-----~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~ 261 (326)
T 2ghs_A 188 PDGTTGYFV-DTKVNRLMRVPLDARTGLPTGKAEVFIDST-----GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGN 261 (326)
T ss_dssp TTSCEEEEE-ETTTCEEEEEEBCTTTCCBSSCCEEEEECT-----TSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCC
T ss_pred CCCCEEEEE-ECCCCEEEEEEcccccCCcccCceEEEECC-----CCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCC
Confidence 564 4443 3223455554321 122 21111111 111 001122334443 444433332 478999999777
Q ss_pred eEEEecc
Q 015428 380 KMQVVSE 386 (407)
Q Consensus 380 ~~~~l~~ 386 (407)
.++.+..
T Consensus 262 ~~~~i~~ 268 (326)
T 2ghs_A 262 HIARYEV 268 (326)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 6666653
No 56
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=54.78 E-value=1.9e+02 Score=29.52 Aligned_cols=198 Identities=10% Similarity=0.002 Sum_probs=96.8
Q ss_pred ecCce-EEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEE
Q 015428 156 TCNGL-VCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFE 234 (407)
Q Consensus 156 s~~GL-ll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~ 234 (407)
..+|- |.+.. ....++++||-|++...++.............+..|+. +. + -++.. ..+.
T Consensus 414 d~~g~~lWigt----~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-----g~--l-wigt~-------~Gl~ 474 (795)
T 4a2l_A 414 DEKKSLVYIGT----HAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGE-----GN--L-WLGTL-------SALV 474 (795)
T ss_dssp ETTTTEEEEEE----TTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSS-----SC--E-EEEES-------SCEE
T ss_pred cCCCCEEEEEe----CcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCC-----CC--E-EEEec-------Ccee
Confidence 34565 55543 23468899999998887764211111122344555543 22 1 12211 1467
Q ss_pred EEeCCCCcccccCCCCCCCcccc-cccceEEE--CCEEEEEecCCcEEEEEcCCCeEeeEeC-CCCCC----CCccEEE-
Q 015428 235 IYSSRSRSWRTTDTICSEPDVLK-LSINGFYM--KGFVYWTSLSGAILVFDLKDEQYGILPL-PARSG----PYGALTQ- 305 (407)
Q Consensus 235 vy~s~t~~W~~~~~~~~~~~~~~-~~~~~v~~--~G~lYwl~~~~~Il~fD~~~e~~~~i~l-P~~~~----~~~~l~~- 305 (407)
+|+..++.|+.......+. .+. ....+++. +|.+ |++..+.|..||..+.++ .+.. +.... .-..+.+
T Consensus 475 ~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~d~~g~l-Wigt~~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d 551 (795)
T 4a2l_A 475 RFNPEQRSFTTIEKEKDGT-PVVSKQITTLFRDSHKRL-WIGGEEGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEA 551 (795)
T ss_dssp EEETTTTEEEECCBCTTCC-BCCCCCEEEEEECTTCCE-EEEESSCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEEC
T ss_pred EEeCCCCeEEEcccccccc-ccCCceEEEEEECCCCCE-EEEeCCceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEEC
Confidence 8899999888764321000 110 11233444 4665 444447899999999888 4321 11100 0112222
Q ss_pred ecCeEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEecCCEEEEEECCCCeEEEec
Q 015428 306 MHGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILLPNKVIAYHVKAQKMQVVS 385 (407)
Q Consensus 306 ~~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~~~~l~~yd~~t~~~~~l~ 385 (407)
.+|+|.+.+.. .+..+ +..... .+ .+... -|.....+..+.....+.|.+.+...|..||+++++++...
T Consensus 552 ~~g~lWigT~~---Gl~~~-d~~~~~--~~-~~~~~---~gl~~~~i~~i~~d~~g~lWi~t~~Gl~~~~~~~~~~~~~~ 621 (795)
T 4a2l_A 552 SNGIIWVGTRE---GFYCF-NEKDKQ--IK-RYNTT---NGLPNNVVYGILEDSFGRLWLSTNRGISCFNPETEKFRNFT 621 (795)
T ss_dssp TTSCEEEEESS---CEEEE-ETTTTE--EE-EECGG---GTCSCSCEEEEEECTTSCEEEEETTEEEEEETTTTEEEEEC
T ss_pred CCCCEEEEeCC---CceeE-CCCCCc--EE-EeCCC---CCCchhheEEEEECCCCCEEEEcCCceEEEcCCCCcEEEcC
Confidence 24555554432 22211 111111 11 11111 11101122333333445667777889999999999988764
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=54.50 E-value=74 Score=28.56 Aligned_cols=189 Identities=12% Similarity=-0.043 Sum_probs=76.2
Q ss_pred CeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCc-ccccCCC
Q 015428 171 NFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRS-WRTTDTI 249 (407)
Q Consensus 171 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~-W~~~~~~ 249 (407)
...+.|||..++.+..+-.... .......+.+.|. +.+- +.... + ..+.+|+..++. |......
T Consensus 32 d~~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~s~~-----~~~l-~s~s~----d---~~v~vwd~~~~~~~~~~~~~ 96 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHARTFSD--HDKIVTCVDWAPK-----SNRI-VTCSQ----D---RNAYVYEKRPDGTWKQTLVL 96 (377)
T ss_dssp SSCBCEEEEETTEEEECCCBCC--CSSCEEEEEECTT-----TCCE-EEEET----T---SSEEEC------CCCCEEEC
T ss_pred CCEEEEEEccCCceEEEEEEec--CCceEEEEEEeCC-----CCEE-EEEeC----C---CeEEEEEcCCCCceeeeeEe
Confidence 4567788888875444333221 1223456777775 3332 22221 1 157888888776 5543221
Q ss_pred CCCCcccccccceEEE--CCE-EEEEecCCcEEEEEcCCCe----EeeEeCCCCCCCCccEEEe-cCeEEEEeee-CCCc
Q 015428 250 CSEPDVLKLSINGFYM--KGF-VYWTSLSGAILVFDLKDEQ----YGILPLPARSGPYGALTQM-HGELCYMLPQ-IQDG 320 (407)
Q Consensus 250 ~~~~~~~~~~~~~v~~--~G~-lYwl~~~~~Il~fD~~~e~----~~~i~lP~~~~~~~~l~~~-~G~L~~v~~~-~~~~ 320 (407)
.... ....++.+ +|. +..-+.++.|..+|+.+.. ...+..|.. ..-..+.-. +|++.+.... ....
T Consensus 97 ~~~~----~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~d~~i~ 171 (377)
T 3dwl_C 97 LRLN----RAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLR-STILSLDWHPNNVLLAAGCADRKAY 171 (377)
T ss_dssp CCCS----SCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCC-SCEEEEEECTTSSEEEEEESSSCEE
T ss_pred cccC----CceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccC-CCeEEEEEcCCCCEEEEEeCCCEEE
Confidence 1110 01112222 343 3333446788889988764 233333211 111122222 4554444433 2345
Q ss_pred eEEEEEcC------CccceeeEe-eeeecccccCcCCcceEEEe-ecCCEEEEe-cCCEEEEEECCCCeE
Q 015428 321 ECLIGVYG------NLDMSLKCV-IPVEHEVLGETFSDCRVLTC-VNSDILIIL-LPNKVIAYHVKAQKM 381 (407)
Q Consensus 321 ~w~l~~~~------~~~W~~~~~-i~l~~~~~~~~~~~~~~~~~-~~g~~lll~-~~~~l~~yd~~t~~~ 381 (407)
+|.+...+ ...|..... -.+...+ +. ......+.+ .++..|+.. .++.+..||+++++.
T Consensus 172 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 172 VLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PS-GGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CC-SSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEEEEecccCCCccccccccccchhhhhhcc-cC-CceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 56653111 011211100 0000011 11 122344455 356655543 457888899888763
No 58
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=53.98 E-value=1.2e+02 Score=26.80 Aligned_cols=106 Identities=12% Similarity=0.075 Sum_probs=58.6
Q ss_pred EEECCEEEEEecC---CcEEEEEcCCCeE-eeEeCCCCCCCCccEEEecCeEEEEeeeCCCceEEEEEcCCccceeeEee
Q 015428 263 FYMKGFVYWTSLS---GAILVFDLKDEQY-GILPLPARSGPYGALTQMHGELCYMLPQIQDGECLIGVYGNLDMSLKCVI 338 (407)
Q Consensus 263 v~~~G~lYwl~~~---~~Il~fD~~~e~~-~~i~lP~~~~~~~~l~~~~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i 338 (407)
.+.+|.||--+.. ..|..+|+++.+- ..+++|...- ..-+...+++|+++... +..++++. . ..-.....|
T Consensus 49 ~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~F-geGit~~g~~ly~ltw~-~~~v~v~D-~--~t~~~~~ti 123 (262)
T 3nol_A 49 FYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYF-GEGISDWKDKIVGLTWK-NGLGFVWN-I--RNLRQVRSF 123 (262)
T ss_dssp EEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCC-EEEEEEETTEEEEEESS-SSEEEEEE-T--TTCCEEEEE
T ss_pred EEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccc-eeEEEEeCCEEEEEEee-CCEEEEEE-C--ccCcEEEEE
Confidence 3457888875543 3899999998654 6677765321 12355567888887553 23344322 2 222233444
Q ss_pred eeecccccCcCCcceEEEeecCCEEEEec-CCEEEEEECCCCeEE
Q 015428 339 PVEHEVLGETFSDCRVLTCVNSDILIILL-PNKVIAYHVKAQKMQ 382 (407)
Q Consensus 339 ~l~~~~~~~~~~~~~~~~~~~g~~lll~~-~~~l~~yd~~t~~~~ 382 (407)
..+. .-..+. .+++.++... ...+..+|++|.++.
T Consensus 124 ~~~~--------eG~glt-~dg~~L~~SdGs~~i~~iDp~T~~v~ 159 (262)
T 3nol_A 124 NYDG--------EGWGLT-HNDQYLIMSDGTPVLRFLDPESLTPV 159 (262)
T ss_dssp ECSS--------CCCCEE-ECSSCEEECCSSSEEEEECTTTCSEE
T ss_pred ECCC--------CceEEe-cCCCEEEEECCCCeEEEEcCCCCeEE
Confidence 4321 111222 3456666654 356888888875543
No 59
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=51.06 E-value=1.5e+02 Score=27.29 Aligned_cols=138 Identities=15% Similarity=0.069 Sum_probs=67.3
Q ss_pred CceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEe
Q 015428 158 NGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYS 237 (407)
Q Consensus 158 ~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~ 237 (407)
.+.|++.. ...+...++-+++...+-.. .....++.+|+. .+ +|+..... ...+..++
T Consensus 87 ~~~l~~~~-----~~~I~~i~~~~~~~~~~~~~-----~~~~~gl~~d~~----~~--~ly~~D~~------~~~I~r~~ 144 (386)
T 3v65_B 87 EPVLLFAN-----RIDIRQVLPHRSEYTLLLNN-----LENAIALDFHHR----RE--LVFWSDVT------LDRILRAN 144 (386)
T ss_dssp CCEEEEEC-----BSCEEEECTTSCCCEEEECS-----CSCEEEEEEETT----TT--EEEEEETT------TTEEEEEE
T ss_pred cceeEeec-----CccceeeccCCCcEEEEecC-----CCccEEEEEecC----CC--eEEEEeCC------CCcEEEEe
Confidence 45565543 24566777766655443321 123477888865 22 33332211 12566677
Q ss_pred CCCCcccccCCCCCCCcccccccceEEE---CCEEEEEec-CCcEEEEEcCCCeEeeEeCCCCCCCCccEEEe--cCeEE
Q 015428 238 SRSRSWRTTDTICSEPDVLKLSINGFYM---KGFVYWTSL-SGAILVFDLKDEQYGILPLPARSGPYGALTQM--HGELC 311 (407)
Q Consensus 238 s~t~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lYwl~~-~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~--~G~L~ 311 (407)
...+..+.+...... ...++.+ +|.|||.-. ...|.++|+....-..+- ......-..++.- +|.|+
T Consensus 145 ~~g~~~~~~~~~~~~------~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~-~~~l~~P~giavdp~~g~ly 217 (386)
T 3v65_B 145 LNGSNVEEVVSTGLE------SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGTIY 217 (386)
T ss_dssp TTSCCEEEEECSSCS------CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE-CSSCSCEEEEEEETTTTEEE
T ss_pred cCCCCcEEEEeCCCC------CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee-cCCCCCCcEEEEEcCCCeEE
Confidence 666554433211110 1123333 689999764 568999998765433332 1111111233332 46666
Q ss_pred EEeeeCCCceEEE
Q 015428 312 YMLPQIQDGECLI 324 (407)
Q Consensus 312 ~v~~~~~~~~w~l 324 (407)
+........++.+
T Consensus 218 ~td~~~~~~I~r~ 230 (386)
T 3v65_B 218 WTDWGNTPRIEAS 230 (386)
T ss_dssp EEECSSSCEEEEE
T ss_pred EeccCCCCEEEEE
Confidence 6544322344444
No 60
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=50.63 E-value=2.1e+02 Score=28.87 Aligned_cols=162 Identities=7% Similarity=0.009 Sum_probs=83.7
Q ss_pred EEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCC--c-ccccCCCCCCCcccccccceE-EECCEEEEEecC
Q 015428 200 VALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSR--S-WRTTDTICSEPDVLKLSINGF-YMKGFVYWTSLS 275 (407)
Q Consensus 200 ~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~--~-W~~~~~~~~~~~~~~~~~~~v-~~~G~lYwl~~~ 275 (407)
....+.|. ++|-++...... .....+.+++..++ . |+.+.... ... ...+ --++.+|+.+..
T Consensus 271 ~~~~~SpD-----G~~l~~~~~~~~---~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~-----~~~~~~dg~~l~~~s~~ 336 (741)
T 1yr2_A 271 HGASVSSD-----GRWVVITSSEGT---DPVNTVHVARVTNGKIGPVTALIPDL-KAQ-----WDFVDGVGDQLWFVSGD 336 (741)
T ss_dssp EEEEECTT-----SCEEEEEEECTT---CSCCEEEEEEEETTEECCCEEEECSS-SSC-----EEEEEEETTEEEEEECT
T ss_pred EEEEECCC-----CCEEEEEEEccC---CCcceEEEEECCCCCCcccEEecCCC-Cce-----EEEEeccCCEEEEEECC
Confidence 45556554 566555443211 12346777788776 6 77765321 111 1122 245688888753
Q ss_pred ----CcEEEEEcCC--CeEeeEeCCCCCCCCccEEEecCeEEEEeeeCC-CceEEEEEcCCccceeeEeeeeecccccCc
Q 015428 276 ----GAILVFDLKD--EQYGILPLPARSGPYGALTQMHGELCYMLPQIQ-DGECLIGVYGNLDMSLKCVIPVEHEVLGET 348 (407)
Q Consensus 276 ----~~Il~fD~~~--e~~~~i~lP~~~~~~~~l~~~~G~L~~v~~~~~-~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~ 348 (407)
..|..+|+.+ +.|..+- |.....-..+...+|.|.+...... ..+|.+.. + +. ..+.+.++.
T Consensus 337 ~~~~~~l~~~d~~~~~~~~~~l~-~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~-~-g~--~~~~l~~~~------ 405 (741)
T 1yr2_A 337 GAPLKKIVRVDLSGSTPRFDTVV-PESKDNLESVGIAGNRLFASYIHDAKSQVLAFDL-D-GK--PAGAVSLPG------ 405 (741)
T ss_dssp TCTTCEEEEEECSSSSCEEEEEE-CCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEET-T-SC--EEEECBCSS------
T ss_pred CCCCCEEEEEeCCCCccccEEEe-cCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeC-C-CC--ceeeccCCC------
Confidence 4699999988 5787664 4332211123334677766655432 34554431 1 11 122232210
Q ss_pred CCcceEEEe-ecCCEEEEe-----cCCEEEEEECCCCeEEEecc
Q 015428 349 FSDCRVLTC-VNSDILIIL-----LPNKVIAYHVKAQKMQVVSE 386 (407)
Q Consensus 349 ~~~~~~~~~-~~g~~lll~-----~~~~l~~yd~~t~~~~~l~~ 386 (407)
.+....+.+ .+++.|++. ....++.||+.+++.+.+..
T Consensus 406 ~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 406 IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSC
T ss_pred CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEec
Confidence 012223333 245544432 23679999999999777643
No 61
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=50.46 E-value=1.4e+02 Score=27.70 Aligned_cols=101 Identities=8% Similarity=-0.017 Sum_probs=49.2
Q ss_pred CCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCcccccCCC
Q 015428 170 GNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRSWRTTDTI 249 (407)
Q Consensus 170 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~ 249 (407)
..+.+.|||..+++...+-.... + ......+.|.|. .+.+ ++..... -.+.++|.+++.-+.....
T Consensus 140 ~dg~i~lWd~~~~~~~~~~~~~g-H-~~~V~~l~f~p~----~~~~-l~s~s~D-------~~v~iwd~~~~~~~~~~~~ 205 (435)
T 4e54_B 140 KGGDIMLWNFGIKDKPTFIKGIG-A-GGSITGLKFNPL----NTNQ-FYASSME-------GTTRLQDFKGNILRVFASS 205 (435)
T ss_dssp TTSCEEEECSSCCSCCEEECCCS-S-SCCCCEEEECSS----CTTE-EEEECSS-------SCEEEEETTSCEEEEEECC
T ss_pred CCCEEEEEECCCCCceeEEEccC-C-CCCEEEEEEeCC----CCCE-EEEEeCC-------CEEEEeeccCCceeEEecc
Confidence 34567889988876533222111 1 123356677775 2333 3333322 1577888877654433221
Q ss_pred CCCCcccccccceEE--ECCEEEEE-ecCCcEEEEEcCCCeE
Q 015428 250 CSEPDVLKLSINGFY--MKGFVYWT-SLSGAILVFDLKDEQY 288 (407)
Q Consensus 250 ~~~~~~~~~~~~~v~--~~G~lYwl-~~~~~Il~fD~~~e~~ 288 (407)
.... ....++. -+|.+... +.++.|..+|+.++..
T Consensus 206 ~~~~----~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~ 243 (435)
T 4e54_B 206 DTIN----IWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL 243 (435)
T ss_dssp SSCS----CCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC
T ss_pred CCCC----ccEEEEEECCCCCEEEEEeCCCcEeeeccCccee
Confidence 1000 1111222 24443333 3467899999876543
No 62
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=50.12 E-value=1.2e+02 Score=25.84 Aligned_cols=136 Identities=10% Similarity=0.022 Sum_probs=72.3
Q ss_pred EEeecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEE
Q 015428 153 IRTTCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIF 232 (407)
Q Consensus 153 i~~s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~ 232 (407)
+.-..+|-+.+.. .....++++++ +++...+..+.. .....++.+|+. +. +...... ...
T Consensus 151 i~~d~~g~l~v~~---~~~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~d~~-----g~--l~v~~~~------~~~ 210 (300)
T 2qc5_A 151 ITLGSDNALWFTE---NQNNSIGRITN-TGKLEEYPLPTN---AAAPVGITSGND-----GA--LWFVEIM------GNK 210 (300)
T ss_dssp EEECTTSSEEEEE---TTTTEEEEECT-TCCEEEEECSST---TCCEEEEEECTT-----SS--EEEEETT------TTE
T ss_pred EEECCCCCEEEEe---cCCCeEEEECC-CCcEEEeeCCCC---CCCcceEEECCC-----CC--EEEEccC------CCE
Confidence 4334566666654 24567889999 777766543221 123356677764 22 2222211 114
Q ss_pred EEEEeCCCCcccccCCCCCCCcccccccceEEE--CCEEEEEec-CCcEEEEEcCCCeEeeEeCCCCCCCCccEEEe-cC
Q 015428 233 FEIYSSRSRSWRTTDTICSEPDVLKLSINGFYM--KGFVYWTSL-SGAILVFDLKDEQYGILPLPARSGPYGALTQM-HG 308 (407)
Q Consensus 233 ~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lYwl~~-~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~-~G 308 (407)
+.+|+. ++........ ... ....++.+ +|.+|+... .+.|..||+ +.++..+.+|.....-..+... +|
T Consensus 211 i~~~~~-~g~~~~~~~~-~~~----~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g 283 (300)
T 2qc5_A 211 IGRITT-TGEISEYDIP-TPN----ARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDG 283 (300)
T ss_dssp EEEECT-TCCEEEEECS-STT----CCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTS
T ss_pred EEEEcC-CCcEEEEECC-CCC----CCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCC
Confidence 677777 5555443211 011 11134554 578776654 478999999 5677777777433222334443 57
Q ss_pred eEEEEee
Q 015428 309 ELCYMLP 315 (407)
Q Consensus 309 ~L~~v~~ 315 (407)
+|++...
T Consensus 284 ~l~v~~~ 290 (300)
T 2qc5_A 284 SVWFALK 290 (300)
T ss_dssp CEEEECS
T ss_pred CEEEEcc
Confidence 7666543
No 63
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=49.61 E-value=1.4e+02 Score=26.41 Aligned_cols=105 Identities=8% Similarity=-0.072 Sum_probs=59.3
Q ss_pred EEECCEEEEEec-CCcEEEEEcCCCeE-eeEeCCCCCCCCccEEEecCeEEEEeeeCCCceEEEEEcCCccceeeEeeee
Q 015428 263 FYMKGFVYWTSL-SGAILVFDLKDEQY-GILPLPARSGPYGALTQMHGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPV 340 (407)
Q Consensus 263 v~~~G~lYwl~~-~~~Il~fD~~~e~~-~~i~lP~~~~~~~~l~~~~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l 340 (407)
.+.+|.||.-+. .+.|..+|+++.+- ..+ +|... ...-+...+++|+++... +..+|++. ...-.....|..
T Consensus 61 ~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~-FgeGit~~g~~Ly~ltw~-~~~v~V~D---~~Tl~~~~ti~~ 134 (268)
T 3nok_A 61 VFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNI-FAEGLASDGERLYQLTWT-EGLLFTWS---GMPPQRERTTRY 134 (268)
T ss_dssp EEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTC-CEEEEEECSSCEEEEESS-SCEEEEEE---TTTTEEEEEEEC
T ss_pred EEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCc-ceeEEEEeCCEEEEEEcc-CCEEEEEE---CCcCcEEEEEeC
Confidence 345678887664 35799999998655 445 66432 112355567788777543 23334322 222234444443
Q ss_pred ecccccCcCCcceEEEeecCCEEEEec-CCEEEEEECCCCeEE
Q 015428 341 EHEVLGETFSDCRVLTCVNSDILIILL-PNKVIAYHVKAQKMQ 382 (407)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~g~~lll~~-~~~l~~yd~~t~~~~ 382 (407)
.. .-..++ .+++.++... ...+..+|++|.+..
T Consensus 135 ~~--------eGwGLt-~Dg~~L~vSdGs~~l~~iDp~T~~v~ 168 (268)
T 3nok_A 135 SG--------EGWGLC-YWNGKLVRSDGGTMLTFHEPDGFALV 168 (268)
T ss_dssp SS--------CCCCEE-EETTEEEEECSSSEEEEECTTTCCEE
T ss_pred CC--------ceeEEe-cCCCEEEEECCCCEEEEEcCCCCeEE
Confidence 21 112222 4567777665 467999999986644
No 64
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=49.49 E-value=1.6e+02 Score=27.58 Aligned_cols=117 Identities=13% Similarity=0.197 Sum_probs=65.8
Q ss_pred ceEEE--CCEEEEEecCCcEEEEEcCCCeEeeE---eC-C-----CC--CCCCccEEEe--cCeEEEEeeeC--------
Q 015428 261 NGFYM--KGFVYWTSLSGAILVFDLKDEQYGIL---PL-P-----AR--SGPYGALTQM--HGELCYMLPQI-------- 317 (407)
Q Consensus 261 ~~v~~--~G~lYwl~~~~~Il~fD~~~e~~~~i---~l-P-----~~--~~~~~~l~~~--~G~L~~v~~~~-------- 317 (407)
.+.+. +|.++|.+..+.+.++|+.++.-.++ .+ . .. ......++.. .++|+++....
T Consensus 230 ~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~ 309 (386)
T 3sjl_D 230 HPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA 309 (386)
T ss_dssp CCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSC
T ss_pred cceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCC
Confidence 34554 79999999889999999987643222 21 0 00 0112234443 36677765421
Q ss_pred CCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCC-EEEEe-c-CCEEEEEECCCCeEE-EecccC
Q 015428 318 QDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSD-ILIIL-L-PNKVIAYHVKAQKMQ-VVSETG 388 (407)
Q Consensus 318 ~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~-~lll~-~-~~~l~~yd~~t~~~~-~l~~~~ 388 (407)
..++|++.. ..+....+|.+.. ....+++ .++. .+|.. . .+.+..||..++++. .+...+
T Consensus 310 ~~~V~viD~---~t~kv~~~i~vg~--------~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~ 374 (386)
T 3sjl_D 310 SRFVVVLDA---KTGERLAKFEMGH--------EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLG 374 (386)
T ss_dssp EEEEEEEET---TTCCEEEEEEEEE--------EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCC
T ss_pred CCEEEEEEC---CCCeEEEEEECCC--------CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCC
Confidence 135666543 3344555666542 1223555 3555 66663 3 478999999998854 444333
No 65
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=49.26 E-value=88 Score=31.21 Aligned_cols=78 Identities=12% Similarity=0.173 Sum_probs=51.4
Q ss_pred EEEEEEeCCCCc--ccccCCCCCCCcccccccc-eEEECCEEEEEecCCcEEEEEcCCC--eEeeEeCCCCCCCCccEEE
Q 015428 231 IFFEIYSSRSRS--WRTTDTICSEPDVLKLSIN-GFYMKGFVYWTSLSGAILVFDLKDE--QYGILPLPARSGPYGALTQ 305 (407)
Q Consensus 231 ~~~~vy~s~t~~--W~~~~~~~~~~~~~~~~~~-~v~~~G~lYwl~~~~~Il~fD~~~e--~~~~i~lP~~~~~~~~l~~ 305 (407)
-.+..+|..|++ |+.....+ .... .+..+|.+|.-+.++.|.+||.++. .|+ .++|.........-+
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~~-------~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~-~~l~~g~~~~P~~y~ 524 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERFA-------VWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWK-FKIPSGAIGYPMTYT 524 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESSC-------CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE-EECSSCCCSCCEEEE
T ss_pred CeEEEEECCCCCEEeEecCCCC-------ccCcceEecCCEEEEECCCCeEEEEECCCCCEEEE-eeCCCCcEeccEEEE
Confidence 356667877764 87643211 1122 3445788888777889999999864 444 488876554444456
Q ss_pred ecCeEEEEeee
Q 015428 306 MHGELCYMLPQ 316 (407)
Q Consensus 306 ~~G~L~~v~~~ 316 (407)
.+|+++++...
T Consensus 525 ~~G~qyv~~~~ 535 (599)
T 1w6s_A 525 HKGTQYVAIYY 535 (599)
T ss_dssp ETTEEEEEEEE
T ss_pred eCCEEEEEEEc
Confidence 89999998775
No 66
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=49.21 E-value=2.1e+02 Score=28.29 Aligned_cols=118 Identities=8% Similarity=0.014 Sum_probs=60.2
Q ss_pred cceEEECCEEEEEecCCcEEEEEcCC--CeEeeEeCCCCCC-------CCccEEEecCeEEEEeeeCCCceEEEEEcCCc
Q 015428 260 INGFYMKGFVYWTSLSGAILVFDLKD--EQYGILPLPARSG-------PYGALTQMHGELCYMLPQIQDGECLIGVYGNL 330 (407)
Q Consensus 260 ~~~v~~~G~lYwl~~~~~Il~fD~~~--e~~~~i~lP~~~~-------~~~~l~~~~G~L~~v~~~~~~~~w~l~~~~~~ 330 (407)
..+++.+|.+|..+..+.|.++|..+ +.|+. .++.... ....++..+|++++.... ..+..+.. .++
T Consensus 62 ~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d--g~l~AlD~-~TG 137 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYSRLFALDAKTGKRLWTY-NHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD--ASVVALNK-NTG 137 (582)
T ss_dssp CCCEEETTEEEEEETTTEEEEEESSSCCEEEEE-ECCCCTTCCCSSCSCCCCCEEETTEEEEEETT--TEEEEEES-SSC
T ss_pred eccEEECCEEEEEcCCCCEEEEECCCCcEEEEE-cCCCCcccccccccCCCccEEECCEEEEEeCC--CEEEEEEC-CCC
Confidence 46788999999988756699999865 46765 3322111 112344567777665432 33333332 122
Q ss_pred cceeeEeeeeecccccCcCCcceEEEeec---CC-EEEEec-------CCEEEEEECCCCeEEEe
Q 015428 331 DMSLKCVIPVEHEVLGETFSDCRVLTCVN---SD-ILIILL-------PNKVIAYHVKAQKMQVV 384 (407)
Q Consensus 331 ~W~~~~~i~l~~~~~~~~~~~~~~~~~~~---g~-~lll~~-------~~~l~~yd~~t~~~~~l 384 (407)
+-.|+..+.-.. .+ ......|+...+ |. .|++.. ...++.||.+|++....
T Consensus 138 ~~~W~~~~~~~~--~~-~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 138 KVVWKKKFADHG--AG-YTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp CEEEEEECSCGG--GT-CBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred CEEeeecCCCCC--cC-cccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 212222211100 00 000112332221 22 566643 46899999999886543
No 67
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=48.29 E-value=92 Score=30.86 Aligned_cols=81 Identities=11% Similarity=-0.022 Sum_probs=52.0
Q ss_pred EEEEEEeCCCCc--ccccCCCCCCCcccccccceEEECCEEEEEecCCcEEEEEcCCC-eEeeEeCCCCCCCCccEEEec
Q 015428 231 IFFEIYSSRSRS--WRTTDTICSEPDVLKLSINGFYMKGFVYWTSLSGAILVFDLKDE-QYGILPLPARSGPYGALTQMH 307 (407)
Q Consensus 231 ~~~~vy~s~t~~--W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~~~~Il~fD~~~e-~~~~i~lP~~~~~~~~l~~~~ 307 (407)
-.+..+|..|++ |+.....+. .....+..+|.+|.-+.++.|.+||.++. ..-.+++|.........-+.+
T Consensus 466 G~l~A~D~~tG~~~W~~~~~~~~------~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~ 539 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKEHLPL------WAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQD 539 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC------CSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred ceEEEEECCCCCEEEEecCCCCC------cccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEEC
Confidence 356677887774 886432211 12233455788888667899999999864 334467776544333344579
Q ss_pred CeEEEEeeeC
Q 015428 308 GELCYMLPQI 317 (407)
Q Consensus 308 G~L~~v~~~~ 317 (407)
|+++++....
T Consensus 540 G~qYv~~~~G 549 (582)
T 1flg_A 540 GEQYLGVTVG 549 (582)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEcc
Confidence 9999987763
No 68
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=47.87 E-value=2e+02 Score=27.88 Aligned_cols=192 Identities=10% Similarity=0.000 Sum_probs=99.5
Q ss_pred cCceEEEeeecccCCeEEEEEcCcccceee-cCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEE
Q 015428 157 CNGLVCCQSVFEVGNFFYYICNPVTKEWHV-LPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEI 235 (407)
Q Consensus 157 ~~GLll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~v 235 (407)
-+|.+++.. .....+.|+|+.|++... ++.. .. ...+.++|. ++|-.+. . . + -.+.+
T Consensus 147 p~~~~~vs~---~~d~~V~v~D~~t~~~~~~i~~g-----~~-~~~v~~spd-----g~~l~v~-~-~---d---~~V~v 204 (543)
T 1nir_A 147 LPNLFSVTL---RDAGQIALVDGDSKKIVKVIDTG-----YA-VHISRMSAS-----GRYLLVI-G-R---D---ARIDM 204 (543)
T ss_dssp GGGEEEEEE---GGGTEEEEEETTTCCEEEEEECS-----TT-EEEEEECTT-----SCEEEEE-E-T---T---SEEEE
T ss_pred CCCEEEEEE---cCCCeEEEEECCCceEEEEEecC-----cc-cceEEECCC-----CCEEEEE-C-C---C---CeEEE
Confidence 367776665 355778999999988643 3321 11 346678875 5554333 2 1 1 36888
Q ss_pred EeC--CCCcccccCCCCCCCcccccccceEEE------CCE-EEEEec-CCcEEEEEcCCCe-EeeEeCCCCC-------
Q 015428 236 YSS--RSRSWRTTDTICSEPDVLKLSINGFYM------KGF-VYWTSL-SGAILVFDLKDEQ-YGILPLPARS------- 297 (407)
Q Consensus 236 y~s--~t~~W~~~~~~~~~~~~~~~~~~~v~~------~G~-lYwl~~-~~~Il~fD~~~e~-~~~i~lP~~~------- 297 (407)
||. .++.- +....... ....+.+ +|. +|.... ++.|..+|..+.+ ...++.+...
T Consensus 205 ~D~~~~t~~~--~~~i~~g~-----~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~ 277 (543)
T 1nir_A 205 IDLWAKEPTK--VAEIKIGI-----EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYH 277 (543)
T ss_dssp EETTSSSCEE--EEEEECCS-----EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEE
T ss_pred EECcCCCCcE--EEEEecCC-----CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccc
Confidence 998 55432 11111111 0122222 464 444432 6889999998754 4556653210
Q ss_pred -CCC-ccEEEe-cCeEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCCEEEEe--cCCEE
Q 015428 298 -GPY-GALTQM-HGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSDILIIL--LPNKV 371 (407)
Q Consensus 298 -~~~-~~l~~~-~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll~--~~~~l 371 (407)
... ..+... +|...++.......+|.+ ++....-.....+.. + ...+.++| .+|..++.. ....+
T Consensus 278 ~~~~v~~i~~s~~~~~~~vs~~~~g~i~vv-d~~~~~~l~~~~i~~-----~---~~~~~~~~spdg~~l~va~~~~~~v 348 (543)
T 1nir_A 278 PEPRVAAIIASHEHPEFIVNVKETGKVLLV-NYKDIDNLTVTSIGA-----A---PFLHDGGWDSSHRYFMTAANNSNKV 348 (543)
T ss_dssp SCCCEEEEEECSSSSEEEEEETTTTEEEEE-ECTTSSSCEEEEEEC-----C---SSCCCEEECTTSCEEEEEEGGGTEE
T ss_pred cCCceEEEEECCCCCEEEEEECCCCeEEEE-EecCCCcceeEEecc-----C---cCccCceECCCCCEEEEEecCCCeE
Confidence 101 123333 356666666555666654 333322111112221 1 12233455 366766654 34789
Q ss_pred EEEECCCCeEEEecc
Q 015428 372 IAYHVKAQKMQVVSE 386 (407)
Q Consensus 372 ~~yd~~t~~~~~l~~ 386 (407)
..+|.+++++.....
T Consensus 349 ~v~D~~tg~l~~~i~ 363 (543)
T 1nir_A 349 AVIDSKDRRLSALVD 363 (543)
T ss_dssp EEEETTTTEEEEEEE
T ss_pred EEEECCCCeEEEeec
Confidence 999999998766543
No 69
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=47.74 E-value=2.3e+02 Score=28.39 Aligned_cols=188 Identities=9% Similarity=0.001 Sum_probs=92.1
Q ss_pred eEEEEEcCccccee--ecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCC------C--
Q 015428 172 FFYYICNPVTKEWH--VLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRS------R-- 241 (407)
Q Consensus 172 ~~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t------~-- 241 (407)
..+++++.-|++.. .+-..+. .........+.|. ++|-++...... + ....+.+++..+ +
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~~~--~~~~~~~~~~SpD-----g~~l~~~~~~~~--~-~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEFPD--EPKWMGGAELSDD-----GRYVLLSIREGC--D-PVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECCTT--CTTCEEEEEECTT-----SCEEEEEEECSS--S-SCCEEEEEEGGGSSSSSCSSC
T ss_pred CEEEEEECCCCcccceEEeccCC--CCeEEEEEEEcCC-----CCEEEEEEEccC--C-CccEEEEEECcccccccCCcc
Confidence 45778887776632 1111110 0112345566664 566555543211 1 134677788765 4
Q ss_pred cccccCCCCCCCcccccccceEEE-CCEEEEEecC----CcEEEEEcCCC---eEeeEeCCCCCCCCccEEEe-cCeEEE
Q 015428 242 SWRTTDTICSEPDVLKLSINGFYM-KGFVYWTSLS----GAILVFDLKDE---QYGILPLPARSGPYGALTQM-HGELCY 312 (407)
Q Consensus 242 ~W~~~~~~~~~~~~~~~~~~~v~~-~G~lYwl~~~----~~Il~fD~~~e---~~~~i~lP~~~~~~~~l~~~-~G~L~~ 312 (407)
.++.+..... . ....+.- ++.+|+.+.. ..|..+|+.+. .|..+-.+.....-..+... +|.|.+
T Consensus 278 ~~~~l~~~~~-~-----~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~ 351 (710)
T 2xdw_A 278 KWVKLIDNFE-G-----EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVL 351 (710)
T ss_dssp CCEEEECSSS-S-----CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEE
T ss_pred ceEEeeCCCC-c-----EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEE
Confidence 5666543111 0 0112332 4678888753 46999999875 47666433321111123334 566666
Q ss_pred EeeeCC-CceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEee-cCCEEEEe-----cCCEEEEEECCCCe--EEE
Q 015428 313 MLPQIQ-DGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCV-NSDILIIL-----LPNKVIAYHVKAQK--MQV 383 (407)
Q Consensus 313 v~~~~~-~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~-~g~~lll~-----~~~~l~~yd~~t~~--~~~ 383 (407)
...... ..+|.+ +..++. ..+.+.++ .+....+.+. +++.+++. ....++.||+.+++ .+.
T Consensus 352 ~~~~~g~~~l~~~-~~~~g~--~~~~l~~~-------~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~ 421 (710)
T 2xdw_A 352 CYLHDVKNTLQLH-DLATGA--LLKIFPLE-------VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRV 421 (710)
T ss_dssp EEEETTEEEEEEE-ETTTCC--EEEEECCC-------SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEE
T ss_pred EEEECCEEEEEEE-ECCCCC--EEEecCCC-------CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEE
Confidence 655432 234433 221222 12333322 1222233332 55555543 24689999999887 665
Q ss_pred ec
Q 015428 384 VS 385 (407)
Q Consensus 384 l~ 385 (407)
+.
T Consensus 422 l~ 423 (710)
T 2xdw_A 422 FR 423 (710)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 70
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=47.52 E-value=2.6e+02 Score=28.93 Aligned_cols=135 Identities=13% Similarity=0.107 Sum_probs=67.3
Q ss_pred EEEEEeCCCCcccccCCCCCCCcccccccceEEE---CCEEEEEec--CCcEEEEEcCCCeEeeEeCCCCCCCCccEEEe
Q 015428 232 FFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYM---KGFVYWTSL--SGAILVFDLKDEQYGILPLPARSGPYGALTQM 306 (407)
Q Consensus 232 ~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lYwl~~--~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~ 306 (407)
.+++++.....-+.+..... ..-.++.+ +|.|||.-. ...|.++++....-..+-. .....-..|+.-
T Consensus 494 ~I~v~~ldG~~~~~l~~~~l------~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~-~~l~~P~GLavD 566 (791)
T 3m0c_C 494 TVSVADTKGVKRKTLFRENG------SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-ENIQWPNGITLD 566 (791)
T ss_dssp EEEEEETTSSSEEEEEECTT------CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-SSCSCEEEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCCC------CCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe-CCCCCceEEEEe
Confidence 67777776544333321100 11245555 589999763 2689999998755444321 111111234333
Q ss_pred --cCeEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCCEEEEec--CCEEEEEECCCCe-
Q 015428 307 --HGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSDILIILL--PNKVIAYHVKAQK- 380 (407)
Q Consensus 307 --~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll~~--~~~l~~yd~~t~~- 380 (407)
+|+|+++-.. ...++.+...+... +.++.- . + ....|+++ ..++.||+.. ...|..+|..+++
T Consensus 567 ~~~~~LYwaD~~-~~~I~~~d~dG~~~---~~v~~~-~---~---~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 567 LLSGRLYWVDSK-LHSISSIDVNGGNR---KTILED-E---K---RLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp TTTTEEEEEETT-TTEEEEEETTSCSC---EEEEEC-T---T---TTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCC
T ss_pred cCCCeEEEEeCC-CCcEEEEecCCCce---EEEecC-C---C---ccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcc
Confidence 6888887543 23455554333221 111110 0 0 01134433 2455666643 3678889976664
Q ss_pred EEEe
Q 015428 381 MQVV 384 (407)
Q Consensus 381 ~~~l 384 (407)
.+.+
T Consensus 636 ~~~l 639 (791)
T 3m0c_C 636 VNLL 639 (791)
T ss_dssp CEEE
T ss_pred eEEe
Confidence 3444
No 71
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=46.99 E-value=1.4e+02 Score=25.85 Aligned_cols=35 Identities=11% Similarity=0.078 Sum_probs=22.2
Q ss_pred eEEEe-ecCCEEEEec--CCEEEEE--ECCCCeEEEeccc
Q 015428 353 RVLTC-VNSDILIILL--PNKVIAY--HVKAQKMQVVSET 387 (407)
Q Consensus 353 ~~~~~-~~g~~lll~~--~~~l~~y--d~~t~~~~~l~~~ 387 (407)
..+++ .+|+.|++.. +..+..| |.++++++.+...
T Consensus 280 ~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 280 RGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp CCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEE
T ss_pred ceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccc
Confidence 34455 3677777654 3566666 7788888777543
No 72
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=46.13 E-value=1.7e+02 Score=26.58 Aligned_cols=194 Identities=13% Similarity=0.039 Sum_probs=91.9
Q ss_pred CceEEEeeecccCCeEEEEEcCcccceeecCCCCc-CCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEE
Q 015428 158 NGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKF-FHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIY 236 (407)
Q Consensus 158 ~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~-~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy 236 (407)
+|.+++.. .....+.+||+.+++....-+... .........+.+.+. + ++++.... ...+.+|
T Consensus 133 ~~~~~~~~---~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~-----~--~~~~s~~~------d~~v~~~ 196 (433)
T 3bws_A 133 NTRLAIPL---LEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH-----N--ELWVSQMQ------ANAVHVF 196 (433)
T ss_dssp SSEEEEEB---TTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG-----T--EEEEEEGG------GTEEEEE
T ss_pred CCeEEEEe---CCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC-----C--EEEEEECC------CCEEEEE
Confidence 67666654 244568999999998876443321 111223345566543 2 23333322 1267889
Q ss_pred eCCCCcccccCCCCCCCcccccccceEEE--CC-EEEEEe-cCCcEEEEEcCCCeEeeEeCCCCCCCCccEEEe-cCeEE
Q 015428 237 SSRSRSWRTTDTICSEPDVLKLSINGFYM--KG-FVYWTS-LSGAILVFDLKDEQYGILPLPARSGPYGALTQM-HGELC 311 (407)
Q Consensus 237 ~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G-~lYwl~-~~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~-~G~L~ 311 (407)
+.+++.-...-.. .. ....++.+ +| .+|... .++.|..+|+.+.+... .++.... -..+... +|+..
T Consensus 197 d~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~-~~~~~~~~~g~~l 268 (433)
T 3bws_A 197 DLKTLAYKATVDL--TG----KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR-KTDKIGL-PRGLLLSKDGKEL 268 (433)
T ss_dssp ETTTCCEEEEEEC--SS----SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-ECCCCSE-EEEEEECTTSSEE
T ss_pred ECCCceEEEEEcC--CC----CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE-EecCCCC-ceEEEEcCCCCEE
Confidence 9877643221100 00 01122222 34 455555 36789999998775522 2222111 1122222 45444
Q ss_pred EEeeeCC------CceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCCEEEEe--cCCEEEEEECCCCeEE
Q 015428 312 YMLPQIQ------DGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSDILIIL--LPNKVIAYHVKAQKMQ 382 (407)
Q Consensus 312 ~v~~~~~------~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll~--~~~~l~~yd~~t~~~~ 382 (407)
++..... .....+++...+. ....+... .....+.+ .+++.+++. .+..+..||+++++..
T Consensus 269 ~~~~~~~~~~~~~dg~i~~~d~~~~~--~~~~~~~~--------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 269 YIAQFSASNQESGGGRLGIYSMDKEK--LIDTIGPP--------GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ 338 (433)
T ss_dssp EEEEEESCTTCSCCEEEEEEETTTTE--EEEEEEEE--------ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEECCCCccccCCCeEEEEECCCCc--EEeeccCC--------CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE
Confidence 4333211 1122233332221 12222111 11223444 356666554 3578999999988765
Q ss_pred Eec
Q 015428 383 VVS 385 (407)
Q Consensus 383 ~l~ 385 (407)
...
T Consensus 339 ~~~ 341 (433)
T 3bws_A 339 KSI 341 (433)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 73
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=46.04 E-value=1.5e+02 Score=25.89 Aligned_cols=203 Identities=11% Similarity=0.076 Sum_probs=95.5
Q ss_pred ecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEE
Q 015428 156 TCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEI 235 (407)
Q Consensus 156 s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~v 235 (407)
+.+|-+++.. .....++++||.+++...+.... .....++.+++. +. +++..... ......+.+
T Consensus 53 ~~~g~l~~~~---~~~~~i~~~d~~~~~~~~~~~~~----~~~~~~i~~~~d-----g~--l~v~~~~~--~~~~~~i~~ 116 (333)
T 2dg1_A 53 DRQGQLFLLD---VFEGNIFKINPETKEIKRPFVSH----KANPAAIKIHKD-----GR--LFVCYLGD--FKSTGGIFA 116 (333)
T ss_dssp CTTSCEEEEE---TTTCEEEEECTTTCCEEEEEECS----SSSEEEEEECTT-----SC--EEEEECTT--SSSCCEEEE
T ss_pred CCCCCEEEEE---CCCCEEEEEeCCCCcEEEEeeCC----CCCcceEEECCC-----Cc--EEEEeCCC--CCCCceEEE
Confidence 4567766544 24568999999999877653211 113456777765 33 22222110 001135778
Q ss_pred EeCCCCccccc-CCCCCCCcccccccceEEE--CCEEEEEec-------CCcEEEEEcCCCeEeeEeCCCCCCCCccEEE
Q 015428 236 YSSRSRSWRTT-DTICSEPDVLKLSINGFYM--KGFVYWTSL-------SGAILVFDLKDEQYGILPLPARSGPYGALTQ 305 (407)
Q Consensus 236 y~s~t~~W~~~-~~~~~~~~~~~~~~~~v~~--~G~lYwl~~-------~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~ 305 (407)
|+..++.-+.. .... .. .....+.+ +|.+|.... ...|..+|+.+.++..+.-. ......+..
T Consensus 117 ~d~~~~~~~~~~~~~~-~~----~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~ 189 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLS-TA----YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIAL 189 (333)
T ss_dssp ECTTSCSCEEEECSSS-SC----CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEE
T ss_pred EeCCCCEEEEEEccCc-cC----CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEE
Confidence 88877765422 1110 00 11122333 577766544 25799999887666554211 011112222
Q ss_pred e-cCe-EEEEeeeCCCceEEEEEcCCcc-c-eeeEeeeeecccccCcCCcceEEEee-cCCEEEEec-CCEEEEEECCCC
Q 015428 306 M-HGE-LCYMLPQIQDGECLIGVYGNLD-M-SLKCVIPVEHEVLGETFSDCRVLTCV-NSDILIILL-PNKVIAYHVKAQ 379 (407)
Q Consensus 306 ~-~G~-L~~v~~~~~~~~w~l~~~~~~~-W-~~~~~i~l~~~~~~~~~~~~~~~~~~-~g~~lll~~-~~~l~~yd~~t~ 379 (407)
. +|+ |+++... ...++.+.....+. . .....+... ..+. .....+++. +|.+.+-.. ...|..||++++
T Consensus 190 ~~dg~~l~v~~~~-~~~i~~~d~~~~g~~~~~~~~~~~~~--~~~~--~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 190 STDEKVLWVTETT-ANRLHRIALEDDGVTIQPFGATIPYY--FTGH--EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp CTTSSEEEEEEGG-GTEEEEEEECTTSSSEEEEEEEEEEE--CCSS--SEEEEEEEBTTCCEEEEEETTTEEEEECTTSC
T ss_pred CCCCCEEEEEeCC-CCeEEEEEecCCCcCcccccceEEEe--cCCC--CCCCceEECCCCCEEEEEcCCCEEEEECCCCC
Confidence 2 454 5444322 23344433211111 1 111111110 0110 122345553 455433333 478999999877
Q ss_pred eEEEecc
Q 015428 380 KMQVVSE 386 (407)
Q Consensus 380 ~~~~l~~ 386 (407)
.++.+..
T Consensus 265 ~~~~~~~ 271 (333)
T 2dg1_A 265 PIGQILI 271 (333)
T ss_dssp EEEEEEC
T ss_pred EEEEEEc
Confidence 7776653
No 74
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=45.87 E-value=1.5e+02 Score=25.95 Aligned_cols=50 Identities=12% Similarity=0.192 Sum_probs=30.4
Q ss_pred CCEEEEEec-CCcEEEEEcCCCeEeeEeCCCCCCCCccEEEe-cCeEEEEeee
Q 015428 266 KGFVYWTSL-SGAILVFDLKDEQYGILPLPARSGPYGALTQM-HGELCYMLPQ 316 (407)
Q Consensus 266 ~G~lYwl~~-~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~-~G~L~~v~~~ 316 (407)
+|.+||... .+.|..||+.+.++..+..+.... -..+... +|+|.++...
T Consensus 55 ~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~i~~~~dg~l~v~~~~ 106 (333)
T 2dg1_A 55 QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKAN-PAAIKIHKDGRLFVCYLG 106 (333)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSS-EEEEEECTTSCEEEEECT
T ss_pred CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCC-cceEEECCCCcEEEEeCC
Confidence 688888754 578999999988876654222111 1133332 5777766543
No 75
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=45.80 E-value=1.7e+02 Score=26.25 Aligned_cols=187 Identities=12% Similarity=0.041 Sum_probs=91.0
Q ss_pred ecCce-EEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEE
Q 015428 156 TCNGL-VCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFE 234 (407)
Q Consensus 156 s~~GL-ll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~ 234 (407)
+.+|- +++.. .....+.+||+.|++....-.... ....+.+.|. +++-++. ... + ..+.
T Consensus 40 s~dg~~l~~~~---~~d~~i~v~d~~~~~~~~~~~~~~-----~v~~~~~spd-----g~~l~~~-~~~---~---~~v~ 99 (391)
T 1l0q_A 40 SPDGTKVYVAN---AHSNDVSIIDTATNNVIATVPAGS-----SPQGVAVSPD-----GKQVYVT-NMA---S---STLS 99 (391)
T ss_dssp CTTSSEEEEEE---GGGTEEEEEETTTTEEEEEEECSS-----SEEEEEECTT-----SSEEEEE-ETT---T---TEEE
T ss_pred CCCCCEEEEEC---CCCCeEEEEECCCCeEEEEEECCC-----CccceEECCC-----CCEEEEE-ECC---C---CEEE
Confidence 44554 33433 244678999999988755332211 3356777775 4443333 211 1 2688
Q ss_pred EEeCCCCcccccCCCCCCCcccccccceEEE--CCE-EEEEec-CCcEEEEEcCCCeEee-EeCCCCCCCCccEEEe-cC
Q 015428 235 IYSSRSRSWRTTDTICSEPDVLKLSINGFYM--KGF-VYWTSL-SGAILVFDLKDEQYGI-LPLPARSGPYGALTQM-HG 308 (407)
Q Consensus 235 vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G~-lYwl~~-~~~Il~fD~~~e~~~~-i~lP~~~~~~~~l~~~-~G 308 (407)
+|+..++.-...-.. .. ...++.+ +|. +|.... ++.|..+|+.+.+... +..... . ..+... +|
T Consensus 100 v~d~~~~~~~~~~~~--~~-----~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~-~~~~~~~dg 169 (391)
T 1l0q_A 100 VIDTTSNTVAGTVKT--GK-----SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS--P-KGIAVTPDG 169 (391)
T ss_dssp EEETTTTEEEEEEEC--SS-----SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS--E-EEEEECTTS
T ss_pred EEECCCCeEEEEEeC--CC-----CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC--c-ceEEECCCC
Confidence 899888754322111 00 1122333 454 544443 6789999998876533 332211 1 122222 45
Q ss_pred eEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCCEEEEec----CCEEEEEECCCCeEEE
Q 015428 309 ELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSDILIILL----PNKVIAYHVKAQKMQV 383 (407)
Q Consensus 309 ~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll~~----~~~l~~yd~~t~~~~~ 383 (407)
+..++....+.. ..+++...+ .....+... .....+.+ .+|+.++... +..+..||+++++...
T Consensus 170 ~~l~~~~~~~~~-v~~~d~~~~--~~~~~~~~~--------~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~ 238 (391)
T 1l0q_A 170 TKVYVANFDSMS-ISVIDTVTN--SVIDTVKVE--------AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITA 238 (391)
T ss_dssp SEEEEEETTTTE-EEEEETTTT--EEEEEEECS--------SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCE-EEEEECCCC--eEEEEEecC--------CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEE
Confidence 544333332222 223333222 222222211 12233444 3566666543 5778999988876543
No 76
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=44.85 E-value=2.4e+02 Score=27.76 Aligned_cols=195 Identities=12% Similarity=-0.018 Sum_probs=97.0
Q ss_pred CceEEEeeecccCCeEEEEEcCccccee-ecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEE
Q 015428 158 NGLVCCQSVFEVGNFFYYICNPVTKEWH-VLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIY 236 (407)
Q Consensus 158 ~GLll~~~~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy 236 (407)
++++++.. .....+.|+|+.|++.. .+|.... ..++.+.|. ++|-.|. . . + ..+.+|
T Consensus 166 ~~~~~V~~---~~~~~V~viD~~t~~v~~~i~~g~~------p~~v~~SpD-----Gr~lyv~-~-~---d---g~V~vi 223 (567)
T 1qks_A 166 ENLFSVTL---RDAGQIALIDGSTYEIKTVLDTGYA------VHISRLSAS-----GRYLFVI-G-R---D---GKVNMI 223 (567)
T ss_dssp GGEEEEEE---TTTTEEEEEETTTCCEEEEEECSSC------EEEEEECTT-----SCEEEEE-E-T---T---SEEEEE
T ss_pred CceEEEEe---CCCCeEEEEECCCCeEEEEEeCCCC------ccceEECCC-----CCEEEEE-c-C---C---CeEEEE
Confidence 34555554 46678999999998765 3543221 135677775 5654432 2 1 1 168889
Q ss_pred eCCCCcccccCCCCCCCcccccccceEEE-----CCE-EEEEec-CCcEEEEEcCCC-eEeeEeCCCC-CC-----CC--
Q 015428 237 SSRSRSWRTTDTICSEPDVLKLSINGFYM-----KGF-VYWTSL-SGAILVFDLKDE-QYGILPLPAR-SG-----PY-- 300 (407)
Q Consensus 237 ~s~t~~W~~~~~~~~~~~~~~~~~~~v~~-----~G~-lYwl~~-~~~Il~fD~~~e-~~~~i~lP~~-~~-----~~-- 300 (407)
|..+..-+.+........ ...-.+- +|. +|.... .+.|.+||..+. ....+++... .. ..
T Consensus 224 D~~~~t~~~v~~i~~G~~----P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~r 299 (567)
T 1qks_A 224 DLWMKEPTTVAEIKIGSE----ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPR 299 (567)
T ss_dssp ETTSSSCCEEEEEECCSE----EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCC
T ss_pred ECCCCCCcEeEEEecCCC----CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCc
Confidence 985222233322211111 1122222 564 444433 578999998774 3355555421 10 01
Q ss_pred -ccEEEe-cCeEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCCEEEEec--CCEEEEEE
Q 015428 301 -GALTQM-HGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSDILIILL--PNKVIAYH 375 (407)
Q Consensus 301 -~~l~~~-~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll~~--~~~l~~yd 375 (407)
..+... ++...++.......+|.+. +....... +..+. .+ .....+++ .+|..+++.. .+.+..+|
T Consensus 300 va~i~~s~~~~~~vv~~~~~g~v~~vd-~~~~~~~~--v~~i~---~~---~~~~d~~~~pdgr~~~va~~~sn~V~ViD 370 (567)
T 1qks_A 300 VAAILASHYRPEFIVNVKETGKILLVD-YTDLNNLK--TTEIS---AE---RFLHDGGLDGSHRYFITAANARNKLVVID 370 (567)
T ss_dssp EEEEEECSSSSEEEEEETTTTEEEEEE-TTCSSEEE--EEEEE---CC---SSEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred eEEEEEcCCCCEEEEEecCCCeEEEEe-cCCCccce--eeeee---cc---ccccCceECCCCCEEEEEeCCCCeEEEEE
Confidence 112222 2344555554445555543 33222111 11121 11 12233445 3667666643 47899999
Q ss_pred CCCCeEEEeccc
Q 015428 376 VKAQKMQVVSET 387 (407)
Q Consensus 376 ~~t~~~~~l~~~ 387 (407)
.+++++...-..
T Consensus 371 ~~t~kl~~~i~v 382 (567)
T 1qks_A 371 TKEGKLVAIEDT 382 (567)
T ss_dssp TTTTEEEEEEEC
T ss_pred CCCCcEEEEEec
Confidence 999987654433
No 77
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=44.39 E-value=1.6e+02 Score=25.61 Aligned_cols=192 Identities=8% Similarity=0.027 Sum_probs=87.6
Q ss_pred EEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCc-ccccCCCCC
Q 015428 173 FYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRS-WRTTDTICS 251 (407)
Q Consensus 173 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~-W~~~~~~~~ 251 (407)
.+.|+|+.+++....-+.. .....+.++|. +++-++. ... +. ..+.+|+...+. -........
T Consensus 109 ~i~v~d~~~~~~~~~~~~~-----~~~~~~~~spd-----g~~l~~~-~~~---~~--~~i~~~~~~~~g~~~~~~~~~~ 172 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIP-----YDAVGIAISPN-----GNGLILI-DRS---SA--NTVRRFKIDADGVLFDTGQEFI 172 (331)
T ss_dssp EEEEEETTTTEEEEEEECC-----TTEEEEEECTT-----SSCEEEE-EET---TT--TEEEEEEECTTCCEEEEEEEEE
T ss_pred cEEEEECCCCCeEEEEECC-----CCccceEECCC-----CCEEEEE-ecC---CC--ceEEEEEECCCCcEeecCCccc
Confidence 8999999998865432211 12256778876 4443332 221 11 125566554321 100000000
Q ss_pred CCcccccccceEEE--CCE-EEEEec-CCcEEEEEcCCCeE----eeEeCCCCCCCCccEEE-ecCeEEEEeeeCCCceE
Q 015428 252 EPDVLKLSINGFYM--KGF-VYWTSL-SGAILVFDLKDEQY----GILPLPARSGPYGALTQ-MHGELCYMLPQIQDGEC 322 (407)
Q Consensus 252 ~~~~~~~~~~~v~~--~G~-lYwl~~-~~~Il~fD~~~e~~----~~i~lP~~~~~~~~l~~-~~G~L~~v~~~~~~~~w 322 (407)
... .....+.+ +|. +|.... ++.|..||+.+.+. ..++.. ... ..+.. -+|+..++....+..++
T Consensus 173 ~~~---~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~--~~~-~~~~~spdg~~l~v~~~~~~~i~ 246 (331)
T 3u4y_A 173 SGG---TRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN--NLP-GTIVVSRDGSTVYVLTESTVDVF 246 (331)
T ss_dssp CSS---SSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS--SCC-CCEEECTTSSEEEEECSSEEEEE
T ss_pred cCC---CCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC--CCC-ceEEECCCCCEEEEEEcCCCEEE
Confidence 000 00122222 565 555543 57899999987653 334432 221 12333 36774444333222333
Q ss_pred EEEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCCEEEEec--CCEEEEEECCCCeEEEeccc
Q 015428 323 LIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSDILIILL--PNKVIAYHVKAQKMQVVSET 387 (407)
Q Consensus 323 ~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll~~--~~~l~~yd~~t~~~~~l~~~ 387 (407)
+++...+.......+.-.....+........+++ .+|+.|++.. ++.+..||+.+++...+...
T Consensus 247 -~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~ 313 (331)
T 3u4y_A 247 -NFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYVAGI 313 (331)
T ss_dssp -EEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEECTTC
T ss_pred -EEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccceecc
Confidence 2443333321122221100000100001123455 4677776653 46899999999998877643
No 78
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=42.97 E-value=1.8e+02 Score=25.95 Aligned_cols=179 Identities=13% Similarity=0.120 Sum_probs=89.5
Q ss_pred CCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCcccccCCC
Q 015428 170 GNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRSWRTTDTI 249 (407)
Q Consensus 170 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~ 249 (407)
....+.|+|+.+++....-... .....+.+.|. +++-++.... + ..+.+|+..++.....-..
T Consensus 94 ~~~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~d-----g~~l~~~~~~----~---~~v~~~d~~~~~~~~~~~~ 156 (391)
T 1l0q_A 94 ASSTLSVIDTTSNTVAGTVKTG-----KSPLGLALSPD-----GKKLYVTNNG----D---KTVSVINTVTKAVINTVSV 156 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECS-----SSEEEEEECTT-----SSEEEEEETT----T---TEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEECCCCeEEEEEeCC-----CCcceEEECCC-----CCEEEEEeCC----C---CEEEEEECCCCcEEEEEec
Confidence 4577999999998875543221 12356677765 4443333221 1 2688899888765432111
Q ss_pred CCCCcccccccceEEE--CC-EEEEEec-CCcEEEEEcCCCeEee-EeCCCCCCCCccEEEe-cCeEEEEeeeC-CCceE
Q 015428 250 CSEPDVLKLSINGFYM--KG-FVYWTSL-SGAILVFDLKDEQYGI-LPLPARSGPYGALTQM-HGELCYMLPQI-QDGEC 322 (407)
Q Consensus 250 ~~~~~~~~~~~~~v~~--~G-~lYwl~~-~~~Il~fD~~~e~~~~-i~lP~~~~~~~~l~~~-~G~L~~v~~~~-~~~~w 322 (407)
.. ....+.+ +| .+|.... ++.|..+|+.+.+... +..... -..+... +|+..++.... .....
T Consensus 157 --~~-----~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~~g~~l~~~~~~~~~~~v 226 (391)
T 1l0q_A 157 --GR-----SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAA---PSGIAVNPEGTKAYVTNVDKYFNTV 226 (391)
T ss_dssp --CS-----SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSE---EEEEEECTTSSEEEEEEECSSCCEE
T ss_pred --CC-----CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCC---ccceEECCCCCEEEEEecCcCCCcE
Confidence 10 0122222 35 4444433 5789999998875532 332211 1122222 45544444321 12223
Q ss_pred EEEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCCEEEEe--cCCEEEEEECCCCeEEEec
Q 015428 323 LIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSDILIIL--LPNKVIAYHVKAQKMQVVS 385 (407)
Q Consensus 323 ~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll~--~~~~l~~yd~~t~~~~~l~ 385 (407)
.+++...+ .....+... .....+.+ .+|+.|++. .+..+..||++++++....
T Consensus 227 ~~~d~~~~--~~~~~~~~~--------~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 227 SMIDTGTN--KITARIPVG--------PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp EEEETTTT--EEEEEEECC--------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEECCCC--eEEEEEecC--------CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 33443322 122222211 11233444 367777654 3578999999998876543
No 79
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=42.43 E-value=2.1e+02 Score=26.41 Aligned_cols=26 Identities=8% Similarity=0.153 Sum_probs=15.0
Q ss_pred ecCCEEEEecCCEEEEEECCCCeEEE
Q 015428 358 VNSDILIILLPNKVIAYHVKAQKMQV 383 (407)
Q Consensus 358 ~~g~~lll~~~~~l~~yd~~t~~~~~ 383 (407)
.+|.+|.-..++.+..+|+++++.++
T Consensus 410 pdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 410 PMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp TTSSCEEEECSSEEEECCCC------
T ss_pred CCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 36676665667789999999887653
No 80
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=42.30 E-value=2e+02 Score=26.28 Aligned_cols=108 Identities=12% Similarity=0.128 Sum_probs=57.4
Q ss_pred ecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEE
Q 015428 156 TCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEI 235 (407)
Q Consensus 156 s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~v 235 (407)
|.+++|.+.. ...++|||..|++...+-..... ......+.|.|. +.|-+++ .. + ..+.+
T Consensus 114 S~~n~lAvgl-----d~tV~lWd~~tg~~~~~~~~~~~--~~~V~sv~fspd-----g~~lasg--s~---D---g~v~i 173 (420)
T 4gga_A 114 SSGNVLAVAL-----DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKE-----GNYLAVG--TS---S---AEVQL 173 (420)
T ss_dssp CTTSEEEEEE-----TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTT-----SSEEEEE--ET---T---SCEEE
T ss_pred CCCCEEEEEe-----CCEEEEEECCCCCEEEEEEecCC--CCcEEEEEECCC-----CCEEEEE--EC---C---CeEEE
Confidence 4566655432 36799999999987665432211 223456778775 4554332 22 1 25788
Q ss_pred EeCCCCcccccCCCCCCCcccccccceEEECCEEEEE-ecCCcEEEEEcCCCeEe
Q 015428 236 YSSRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYWT-SLSGAILVFDLKDEQYG 289 (407)
Q Consensus 236 y~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl-~~~~~Il~fD~~~e~~~ 289 (407)
|+..++.-...-. ... ....++..+|.+-.. ..++.+..+|.......
T Consensus 174 Wd~~~~~~~~~~~--~h~----~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~ 222 (420)
T 4gga_A 174 WDVQQQKRLRNMT--SHS----ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHH 222 (420)
T ss_dssp EETTTTEEEEEEC--CCS----SCEEEEEEETTEEEEEETTSEEEEEETTSSSCE
T ss_pred EEcCCCcEEEEEe--CCC----CceEEEeeCCCEEEEEeCCCceeEeeeccccee
Confidence 8888764221110 000 112344455543332 34567888887765443
No 81
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=41.46 E-value=1.2e+02 Score=26.43 Aligned_cols=108 Identities=19% Similarity=0.359 Sum_probs=56.8
Q ss_pred CeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCcccccCCCC
Q 015428 171 NFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRSWRTTDTIC 250 (407)
Q Consensus 171 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~ 250 (407)
...++.+||.|++...+. .. ....++.++|. +.+ ++...... .......+.+|+...+.........
T Consensus 168 ~~~v~~~d~~~g~~~~~~--~~----~~p~gl~~spd-----g~~-lyv~~~~~-~~~~~~~i~~~~~~~~~l~~~~~~~ 234 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMA--DL----DHPNGLAFSPD-----EQT-LYVSQTPE-QGHGSVEITAFAWRDGALHDRRHFA 234 (305)
T ss_dssp CEEEEEECSSSCCCEEEE--EE----SSEEEEEECTT-----SSE-EEEEECCC----CCCEEEEEEEETTEEEEEEEEE
T ss_pred CCeEEEEcCCCCcEEEEe--cC----CCCcceEEcCC-----CCE-EEEEecCC-cCCCCCEEEEEEecCCCccCCeEEE
Confidence 367999999998877664 11 12245677765 232 22222110 0001125667776554321110000
Q ss_pred CCCcccccccceEEE--CCEEEEEecCCcEEEEEcCCCeEeeEeCCC
Q 015428 251 SEPDVLKLSINGFYM--KGFVYWTSLSGAILVFDLKDEQYGILPLPA 295 (407)
Q Consensus 251 ~~~~~~~~~~~~v~~--~G~lYwl~~~~~Il~fD~~~e~~~~i~lP~ 295 (407)
.... ....++.+ +|. .|++..+.|..||+..+....+.+|.
T Consensus 235 ~~~~---~~pdgi~~d~~G~-lwv~~~~gv~~~~~~g~~~~~~~~~~ 277 (305)
T 3dr2_A 235 SVPD---GLPDGFCVDRGGW-LWSSSGTGVCVFDSDGQLLGHIPTPG 277 (305)
T ss_dssp CCSS---SCCCSEEECTTSC-EEECCSSEEEEECTTSCEEEEEECSS
T ss_pred ECCC---CCCCeEEECCCCC-EEEecCCcEEEECCCCCEEEEEECCC
Confidence 0000 01123333 577 56665677999999988889998886
No 82
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=41.38 E-value=1.8e+02 Score=25.49 Aligned_cols=120 Identities=14% Similarity=0.061 Sum_probs=64.8
Q ss_pred eEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCC---cccccCC
Q 015428 172 FFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSR---SWRTTDT 248 (407)
Q Consensus 172 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~---~W~~~~~ 248 (407)
..+++++|.+++...+.... ....++++++. +.+-.|+ .. ....+.+|+..+. ..+....
T Consensus 165 g~v~~~d~~~~~~~~~~~~~-----~~p~gia~~~d-----g~~lyv~-d~------~~~~I~~~~~~~~~~~~~~~~~~ 227 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKEL-----HVPGGAEVSAD-----SSFVLVA-EF------LSHQIVKYWLEGPKKGTAEVLVK 227 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEE-----SCCCEEEECTT-----SSEEEEE-EG------GGTEEEEEESSSTTTTCEEEEEE
T ss_pred ceEEEEeCCCCEEEEeccCC-----ccCcceEECCC-----CCEEEEE-eC------CCCeEEEEECCCCcCCccceEEe
Confidence 67899999888765543210 11134566654 3322222 11 1126777877653 2222111
Q ss_pred CCCCCcccccccceEEE--CCEEEEEecC-----------CcEEEEEcCCCeEeeEeCCCCC--CCCccEEEecCeEEEE
Q 015428 249 ICSEPDVLKLSINGFYM--KGFVYWTSLS-----------GAILVFDLKDEQYGILPLPARS--GPYGALTQMHGELCYM 313 (407)
Q Consensus 249 ~~~~~~~~~~~~~~v~~--~G~lYwl~~~-----------~~Il~fD~~~e~~~~i~lP~~~--~~~~~l~~~~G~L~~v 313 (407)
. +. ..++.+ +|.+|.-... +.|..||...+....+..|... ..-..+..-+|+|++.
T Consensus 228 ~--~g------P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~ 299 (322)
T 2fp8_A 228 I--PN------PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIG 299 (322)
T ss_dssp C--SS------EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEE
T ss_pred C--CC------CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEe
Confidence 0 10 133444 4775443322 4699999998888888888642 2223445567888876
Q ss_pred eee
Q 015428 314 LPQ 316 (407)
Q Consensus 314 ~~~ 316 (407)
...
T Consensus 300 ~~~ 302 (322)
T 2fp8_A 300 TLF 302 (322)
T ss_dssp CSS
T ss_pred ecC
Confidence 543
No 83
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=41.33 E-value=1.4e+02 Score=29.30 Aligned_cols=81 Identities=12% Similarity=0.143 Sum_probs=50.5
Q ss_pred EEEEEEeCCCCc--ccccCCCCCCCcccccccceEEECCEEEEEecCCcEEEEEcCCC-eEeeEeCCCCCCCCccEEEec
Q 015428 231 IFFEIYSSRSRS--WRTTDTICSEPDVLKLSINGFYMKGFVYWTSLSGAILVFDLKDE-QYGILPLPARSGPYGALTQMH 307 (407)
Q Consensus 231 ~~~~vy~s~t~~--W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~~~~Il~fD~~~e-~~~~i~lP~~~~~~~~l~~~~ 307 (407)
-.+..+|..+++ |+...... . .....+..+|.+|.-+.++.|.+||.++. ....++++..........+.+
T Consensus 444 g~l~a~D~~tG~~~W~~~~~~~--~----~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~ 517 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWEKFA--A----WGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFK 517 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESSC--C----CSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred CeEEEEECCCCCEEEEecCCCC--c----cceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEEC
Confidence 467778887764 88643211 1 11123445788888767899999998764 333456665443333334579
Q ss_pred CeEEEEeeeC
Q 015428 308 GELCYMLPQI 317 (407)
Q Consensus 308 G~L~~v~~~~ 317 (407)
|+++++....
T Consensus 518 G~~yv~~~~G 527 (571)
T 2ad6_A 518 GKQYIGSMYG 527 (571)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEECC
Confidence 9999887763
No 84
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=41.14 E-value=2.2e+02 Score=28.90 Aligned_cols=109 Identities=17% Similarity=0.124 Sum_probs=53.2
Q ss_pred CCEEEEEec--CCcEEEEEcCCCeEeeEeCCCCCCCCccEEEe--cCeEEEEeeeCCCceEEEEEcCCccceeeEeeeee
Q 015428 266 KGFVYWTSL--SGAILVFDLKDEQYGILPLPARSGPYGALTQM--HGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVE 341 (407)
Q Consensus 266 ~G~lYwl~~--~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~--~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~ 341 (407)
+|.|||... .+.|.++++....-.++-. .....-..|+.. +|+|+++... ...++++...+.. .+..+...
T Consensus 507 ~g~ly~td~~~~~~I~~~~~dG~~~~~l~~-~~l~~PnGlavd~~~~~LY~aD~~-~~~I~~~d~dG~~---~~~~~~~~ 581 (699)
T 1n7d_A 507 HGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGN---RKTILEDE 581 (699)
T ss_dssp SSCCEECCCSSSCCEEBCCSSSCCCCEESC-SSCSSCCCEEECTTTCCEEEEETT-TTEEEEECSSSSC---CEEECCCS
T ss_pred CCcEEEcccCCCCeEEEEeCCCCCeeEEEe-CCCCCccEEEEeccCCEEEEEecC-CCeEEEEccCCCc---eEEEEecC
Confidence 689999653 2689999987644333311 111111234443 5778776643 2344443322211 11111110
Q ss_pred cccccCcCCcceEEEeecCCEEEEec--CCEEEEEECCCCeEEEec
Q 015428 342 HEVLGETFSDCRVLTCVNSDILIILL--PNKVIAYHVKAQKMQVVS 385 (407)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~g~~lll~~--~~~l~~yd~~t~~~~~l~ 385 (407)
..+ +....+++ +++.||+.. ...|..+|..+++...+-
T Consensus 582 -~~~----~~P~glav-d~~~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 582 -KRL----AHPFSLAV-FEDKVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp -SSC----SSCCCCEE-ETTEEEEECSTTTCEEEEETTTEEEEECC
T ss_pred -CcC----CCceEeEE-ECCEEEEEeCCCCeEEEEEccCCCceEEe
Confidence 001 11122333 345566543 367999999877765544
No 85
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=39.83 E-value=3.1e+02 Score=27.71 Aligned_cols=51 Identities=18% Similarity=0.330 Sum_probs=28.4
Q ss_pred EEEEEeCCCCcccccCCCCCCCcccccccceEEEC----C-EEEEEecCCcEEEEEcCCC
Q 015428 232 FFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMK----G-FVYWTSLSGAILVFDLKDE 286 (407)
Q Consensus 232 ~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~----G-~lYwl~~~~~Il~fD~~~e 286 (407)
.+.+|+..++.|.......... ....++.+. | .+.--+.++.|..+|+.+.
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~----~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHS----ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCS----SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred eEEEEECCCCcccccccccCCC----CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 5788888888776544321111 111223332 3 3333445688999998765
No 86
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=39.41 E-value=1.7e+02 Score=24.50 Aligned_cols=194 Identities=9% Similarity=0.023 Sum_probs=88.9
Q ss_pred eEEeecCceEEE-eeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcce
Q 015428 152 NIRTTCNGLVCC-QSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSI 230 (407)
Q Consensus 152 ~i~~s~~GLll~-~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~ 230 (407)
.+.-+.+|.+.+ .. .....++++|+-++....++..... ...++.+++. +. +.+....
T Consensus 28 ~i~~~~~g~l~v~~~---~~~~~i~~~~~~~~~~~~~~~~~~~----~p~~i~~~~~-----g~--l~v~~~~------- 86 (270)
T 1rwi_B 28 GVAVDSAGNVYVTSE---GMYGRVVKLATGSTGTTVLPFNGLY----QPQGLAVDGA-----GT--VYVTDFN------- 86 (270)
T ss_dssp EEEECTTCCEEEEEC---SSSCEEEEECC-----EECCCCSCC----SCCCEEECTT-----CC--EEEEETT-------
T ss_pred ceEECCCCCEEEEcc---CCCCcEEEecCCCcccceEeeCCcC----CcceeEECCC-----CC--EEEEcCC-------
Confidence 344455677666 43 2456788999988877666533211 1234666764 33 3332211
Q ss_pred EEEEEEeCCCCcccccCCCCCCCcccccccceEEE--CCEEEEEec-CCcEEEEEcCCCeEeeEeCCCCCCCCccEEEe-
Q 015428 231 IFFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYM--KGFVYWTSL-SGAILVFDLKDEQYGILPLPARSGPYGALTQM- 306 (407)
Q Consensus 231 ~~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lYwl~~-~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~- 306 (407)
..+.+|+..++.-........ ....++.+ +|.+|+... .+.|..||..+........ .....-..+...
T Consensus 87 ~~i~~~d~~~~~~~~~~~~~~------~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~-~~~~~p~~i~~~~ 159 (270)
T 1rwi_B 87 NRVVTLAAGSNNQTVLPFDGL------NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF-TGLNDPDGVAVDN 159 (270)
T ss_dssp TEEEEECTTCSCCEECCCCSC------SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC-CSCCSCCCEEECT
T ss_pred CEEEEEeCCCceEeeeecCCc------CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc-ccCCCceeEEEeC
Confidence 157778877654433221100 01123444 588777643 5689999877654432211 111111234433
Q ss_pred cCeEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec--CCEEEEEECCCCeEEEe
Q 015428 307 HGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL--PNKVIAYHVKAQKMQVV 384 (407)
Q Consensus 307 ~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~--~~~l~~yd~~t~~~~~l 384 (407)
+|+|++..... ..+..+ +.+... ... .. .... .....+++..++.+++.. ...+..||+.++.....
T Consensus 160 ~g~l~v~~~~~-~~i~~~-~~~~~~--~~~---~~---~~~~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~ 228 (270)
T 1rwi_B 160 SGNVYVTDTDN-NRVVKL-EAESNN--QVV---LP---FTDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVL 228 (270)
T ss_dssp TCCEEEEEGGG-TEEEEE-CTTTCC--EEE---CC---CSSC-CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEEC
T ss_pred CCCEEEEECCC-CEEEEE-ecCCCc--eEe---ec---ccCC-CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceee
Confidence 57766654431 222221 111111 100 00 0100 122344553333455543 46799999988775544
No 87
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=38.71 E-value=2e+02 Score=25.21 Aligned_cols=19 Identities=16% Similarity=0.190 Sum_probs=14.1
Q ss_pred CEEEEEECCCCeEEEeccc
Q 015428 369 NKVIAYHVKAQKMQVVSET 387 (407)
Q Consensus 369 ~~l~~yd~~t~~~~~l~~~ 387 (407)
..++.||.+.+.++.+...
T Consensus 260 ~~v~~~d~~G~~~~~~~~~ 278 (322)
T 2fp8_A 260 PKGIKFDEFGNILEVIPLP 278 (322)
T ss_dssp EEEEEECTTSCEEEEEECC
T ss_pred cEEEEECCCCCEEEEEECC
Confidence 4689999987777776544
No 88
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=38.53 E-value=2e+02 Score=25.02 Aligned_cols=25 Identities=16% Similarity=0.323 Sum_probs=19.5
Q ss_pred cCCEEEEecCCEEEEEECCCCeEEEe
Q 015428 359 NSDILIILLPNKVIAYHVKAQKMQVV 384 (407)
Q Consensus 359 ~g~~lll~~~~~l~~yd~~t~~~~~l 384 (407)
+|+.++.. ...+..||+++++....
T Consensus 266 dg~~l~~~-~~~v~~~d~~~~~~~~~ 290 (349)
T 1jmx_B 266 DPNQIYGV-LNRLAKYDLKQRKLIKA 290 (349)
T ss_dssp CTTEEEEE-ESEEEEEETTTTEEEEE
T ss_pred CCCEEEEE-cCeEEEEECccCeEEEE
Confidence 66777766 77899999999886544
No 89
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=38.04 E-value=1.6e+02 Score=29.54 Aligned_cols=81 Identities=5% Similarity=-0.031 Sum_probs=53.0
Q ss_pred EEEEEEeCCCCc--ccccCCCCCCCcccccccceEEECCEEEEEecCCcEEEEEcCCC-eEeeEeCCCCCCCCccEEEec
Q 015428 231 IFFEIYSSRSRS--WRTTDTICSEPDVLKLSINGFYMKGFVYWTSLSGAILVFDLKDE-QYGILPLPARSGPYGALTQMH 307 (407)
Q Consensus 231 ~~~~vy~s~t~~--W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~~~~Il~fD~~~e-~~~~i~lP~~~~~~~~l~~~~ 307 (407)
-.+..+|..|++ |+.....+. .....+..+|.+|.-+.++.|.+||..+. ....+++|..........+.+
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~~------~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~ 511 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTHW------NGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELA 511 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSSC------CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred ceEEEEeCCCCcEEEEccCCCCC------cCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEEC
Confidence 456778888874 886432211 11234455778888777899999999864 445667775544334444689
Q ss_pred CeEEEEeeeC
Q 015428 308 GELCYMLPQI 317 (407)
Q Consensus 308 G~L~~v~~~~ 317 (407)
|+++++..+.
T Consensus 512 G~~yva~~~G 521 (668)
T 1kv9_A 512 GRQYVAIMAG 521 (668)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 9998876653
No 90
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=37.26 E-value=2.3e+02 Score=28.66 Aligned_cols=139 Identities=13% Similarity=-0.007 Sum_probs=69.3
Q ss_pred EEeecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEE
Q 015428 153 IRTTCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIF 232 (407)
Q Consensus 153 i~~s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~ 232 (407)
+....+|.+.+... ....++.+||.|++...+...... ......++..|.. +..- ++.. ..
T Consensus 477 i~~d~~g~lWi~~~---t~~Gl~~~d~~~~~~~~~~~~~~~-~~~~~~~i~~d~~-----g~lW---igt~-------~G 537 (758)
T 3ott_A 477 IIPDNEGNVWVLLY---NNKGIDKINPRTREVTKLFADELT-GEKSPNYLLCDED-----GLLW---VGFH-------GG 537 (758)
T ss_dssp EEECTTSCEEEEET---TCSSEEEEETTTTEEEEECTTTSC-GGGCEEEEEECTT-----SCEE---EEET-------TE
T ss_pred EEEcCCCCEEEEcc---CCCCcEEEeCCCCceEEecCCCcC-CCcccceEEECCC-----CCEE---EEec-------Cc
Confidence 34455676665211 124578899999988876432111 0112233444432 2222 1211 14
Q ss_pred EEEEeCCCCcccccCCCCCCCcccccccceEEECCEEEEEecCCcEEEEEcCCCeEeeEeCCCCCCCCccEEE-ecCeEE
Q 015428 233 FEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYWTSLSGAILVFDLKDEQYGILPLPARSGPYGALTQ-MHGELC 311 (407)
Q Consensus 233 ~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~-~~G~L~ 311 (407)
+..|+..++.++.......+.. .-..-+.-+|.+ |++....|..||+.+.++....+|...- ...... .+|.|+
T Consensus 538 l~~~~~~~~~~~~~~~~gl~~~---~i~~i~~~~g~l-Wi~t~~Gl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~l~ 612 (758)
T 3ott_A 538 VMRINPKDESQQSISFGSFSNN---EILSMTCVKNSI-WVSTTNGLWIIDRKTMDARQQNMTNKRF-TSLLFDPKEDCVY 612 (758)
T ss_dssp EEEECC--CCCCBCCCCC---C---CEEEEEEETTEE-EEEESSCEEEEETTTCCEEEC--CCCCC-SEEEEETTTTEEE
T ss_pred eEEEecCCCceEEecccCCCcc---ceEEEEECCCCE-EEECCCCeEEEcCCCceeEEecCCCCce-eeeEEECCCCcEE
Confidence 7788888888775531111111 011122346765 6666778999999999998776665322 112222 267777
Q ss_pred EEee
Q 015428 312 YMLP 315 (407)
Q Consensus 312 ~v~~ 315 (407)
+...
T Consensus 613 fG~~ 616 (758)
T 3ott_A 613 LGGA 616 (758)
T ss_dssp EECB
T ss_pred EecC
Confidence 6443
No 91
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=37.04 E-value=2e+02 Score=24.78 Aligned_cols=117 Identities=8% Similarity=0.086 Sum_probs=53.7
Q ss_pred CC-EEEEEe-cCCcEEEEEcCC-CeEe-----eEeCCCCCCCCccEEE-ecCeEEEEeeeCCCceEEEEEcC--Ccccee
Q 015428 266 KG-FVYWTS-LSGAILVFDLKD-EQYG-----ILPLPARSGPYGALTQ-MHGELCYMLPQIQDGECLIGVYG--NLDMSL 334 (407)
Q Consensus 266 ~G-~lYwl~-~~~~Il~fD~~~-e~~~-----~i~lP~~~~~~~~l~~-~~G~L~~v~~~~~~~~w~l~~~~--~~~W~~ 334 (407)
+| .+|... .++.|..||+.+ .+.. .+..+...... .+.. -+|+..++.... .....+++.+ .+.+..
T Consensus 139 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~pdg~~l~~~~~~-~~~i~~~~~~~~~g~~~~ 216 (343)
T 1ri6_A 139 DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPR-HMVFHPNEQYAYCVNEL-NSSVDVWELKDPHGNIEC 216 (343)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEE-EEEECTTSSEEEEEETT-TTEEEEEESSCTTSCCEE
T ss_pred CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcc-eEEECCCCCEEEEEeCC-CCEEEEEEecCCCCcEEE
Confidence 45 455554 468899999987 6554 23333322111 2222 256643333322 2223334432 233322
Q ss_pred eEeeeeecccccCcCCcceEEEe-ecCCEEEEec--CCEEEEEECC--CCeEEEec
Q 015428 335 KCVIPVEHEVLGETFSDCRVLTC-VNSDILIILL--PNKVIAYHVK--AQKMQVVS 385 (407)
Q Consensus 335 ~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll~~--~~~l~~yd~~--t~~~~~l~ 385 (407)
...+...+...+. ......+.+ .+|+.|++.. +..+..||++ +++.+.+.
T Consensus 217 ~~~~~~~~~~~~~-~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 217 VQTLDMMPENFSD-TRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp EEEEECSCTTCCS-CCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE
T ss_pred EeeccccCccccc-cCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee
Confidence 2222211100000 011223455 3666776543 4789999988 55555553
No 92
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=36.82 E-value=1.9e+02 Score=24.43 Aligned_cols=192 Identities=15% Similarity=0.114 Sum_probs=93.2
Q ss_pred eecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEE
Q 015428 155 TTCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFE 234 (407)
Q Consensus 155 ~s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~ 234 (407)
+..+|.|.+.. .....++++++-++....+-... .....++++|+. + . +++..... ...+.
T Consensus 44 d~~~~~ly~~d---~~~~~I~~~~~~g~~~~~~~~~~----~~~p~~ia~d~~----~-~-~lyv~d~~------~~~I~ 104 (267)
T 1npe_A 44 DCVDKVVYWTD---ISEPSIGRASLHGGEPTTIIRQD----LGSPEGIALDHL----G-R-TIFWTDSQ------LDRIE 104 (267)
T ss_dssp ETTTTEEEEEE---TTTTEEEEEESSSCCCEEEECTT----CCCEEEEEEETT----T-T-EEEEEETT------TTEEE
T ss_pred ecCCCEEEEEE---CCCCEEEEEecCCCCcEEEEECC----CCCccEEEEEec----C-C-eEEEEECC------CCEEE
Confidence 34467777765 35567888998776544332111 122356778865 2 2 22222211 12567
Q ss_pred EEeCCCCcccccCCCCCCCcccccccceEEE---CCEEEEEecC---CcEEEEEcCCCeEeeEeCCCCCCCCccEEEe--
Q 015428 235 IYSSRSRSWRTTDTICSEPDVLKLSINGFYM---KGFVYWTSLS---GAILVFDLKDEQYGILPLPARSGPYGALTQM-- 306 (407)
Q Consensus 235 vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lYwl~~~---~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~-- 306 (407)
+++.....-+..... . . ....++.+ +|.+||.... +.|.++++.......+... ....-..++..
T Consensus 105 ~~~~~g~~~~~~~~~--~---~-~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~-~~~~P~gia~d~~ 177 (267)
T 1npe_A 105 VAKMDGTQRRVLFDT--G---L-VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD-NLGLPNGLTFDAF 177 (267)
T ss_dssp EEETTSCSCEEEECS--S---C-SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT-TCSCEEEEEEETT
T ss_pred EEEcCCCCEEEEEEC--C---C-CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC-CCCCCcEEEEcCC
Confidence 777654322221110 1 0 11133444 6899998643 5899999876554443211 11111233333
Q ss_pred cCeEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEec--CCEEEEEECCCCeE-EE
Q 015428 307 HGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILL--PNKVIAYHVKAQKM-QV 383 (407)
Q Consensus 307 ~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~--~~~l~~yd~~t~~~-~~ 383 (407)
+++|+++... ...++.+.. +.. ..... +. .. .....+++ +++.|++.. ...+..+|..+++. +.
T Consensus 178 ~~~lyv~d~~-~~~I~~~~~-~g~--~~~~~--~~--~~----~~P~gi~~-d~~~lyva~~~~~~v~~~d~~~g~~~~~ 244 (267)
T 1npe_A 178 SSQLCWVDAG-THRAECLNP-AQP--GRRKV--LE--GL----QYPFAVTS-YGKNLYYTDWKTNSVIAMDLAISKEMDT 244 (267)
T ss_dssp TTEEEEEETT-TTEEEEEET-TEE--EEEEE--EE--CC----CSEEEEEE-ETTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCEEEEEECC-CCEEEEEec-CCC--ceEEE--ec--CC----CCceEEEE-eCCEEEEEECCCCeEEEEeCCCCCceEE
Confidence 3567666543 234444332 111 11111 11 01 11123333 456666643 47899999998764 45
Q ss_pred ec
Q 015428 384 VS 385 (407)
Q Consensus 384 l~ 385 (407)
+.
T Consensus 245 i~ 246 (267)
T 1npe_A 245 FH 246 (267)
T ss_dssp EC
T ss_pred Ec
Confidence 54
No 93
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=35.14 E-value=1.5e+02 Score=25.58 Aligned_cols=50 Identities=22% Similarity=0.214 Sum_probs=31.2
Q ss_pred CCEEEEE--------ecCCcEEEEEcCCCeEeeEeCCCCC---CCCccEEE-ec-CeEEEEee
Q 015428 266 KGFVYWT--------SLSGAILVFDLKDEQYGILPLPARS---GPYGALTQ-MH-GELCYMLP 315 (407)
Q Consensus 266 ~G~lYwl--------~~~~~Il~fD~~~e~~~~i~lP~~~---~~~~~l~~-~~-G~L~~v~~ 315 (407)
+|.+|+. ...+.|..||+.+.++..+..|... ..-..+.. -+ |+|+++..
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~ 90 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM 90 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC
Confidence 6888887 4467899999988888777653211 11112333 34 77777654
No 94
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=34.90 E-value=4.5e+02 Score=28.11 Aligned_cols=199 Identities=13% Similarity=0.080 Sum_probs=95.4
Q ss_pred eecCceEEEeeecccCCeEEEEEcCcccceee-cCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEE
Q 015428 155 TTCNGLVCCQSVFEVGNFFYYICNPVTKEWHV-LPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFF 233 (407)
Q Consensus 155 ~s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~ 233 (407)
-+.+|-.++... ..+.+.|||..|++... +.. .......+.|.|. +.|-+. ... + ..+
T Consensus 623 ~s~~~~~l~s~~---~d~~i~vw~~~~~~~~~~~~~-----h~~~v~~~~~s~~-----~~~l~s-~~~----d---~~v 681 (1249)
T 3sfz_A 623 FSQDGQRIASCG---ADKTLQVFKAETGEKLLDIKA-----HEDEVLCCAFSSD-----DSYIAT-CSA----D---KKV 681 (1249)
T ss_dssp ECTTSSEEEEEE---TTSCEEEEETTTCCEEEEECC-----CSSCEEEEEECTT-----SSEEEE-EET----T---SEE
T ss_pred ECCCCCEEEEEe---CCCeEEEEECCCCCEEEEecc-----CCCCEEEEEEecC-----CCEEEE-EeC----C---CeE
Confidence 355666666543 45678999999987543 331 1224466778775 444332 221 1 268
Q ss_pred EEEeCCCCcccccCCCCCCCcccccccceEEE----CC-EEEEEecCCcEEEEEcCCCeEeeEeCCCCCCCCccEEEe-c
Q 015428 234 EIYSSRSRSWRTTDTICSEPDVLKLSINGFYM----KG-FVYWTSLSGAILVFDLKDEQYGILPLPARSGPYGALTQM-H 307 (407)
Q Consensus 234 ~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~----~G-~lYwl~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~-~ 307 (407)
.+++..++.-...-.. .. ....++.+ ++ .+..-+.++.|..+|+.+......- ......-..+... +
T Consensus 682 ~vwd~~~~~~~~~~~~--~~----~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~-~~h~~~v~~~~~sp~ 754 (1249)
T 3sfz_A 682 KIWDSATGKLVHTYDE--HS----EQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM-FGHTNSVNHCRFSPD 754 (1249)
T ss_dssp EEEETTTCCEEEEEEC--CS----SCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE-CCCSSCEEEEEECSS
T ss_pred EEEECCCCceEEEEcC--CC----CcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee-cCCCCCEEEEEEecC
Confidence 8999888753221100 00 01122222 22 2333345678999999876543221 1111111122222 4
Q ss_pred CeEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccC------cCCcceEEEe-ecCCEEEEecCCEEEEEECCCCe
Q 015428 308 GELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGE------TFSDCRVLTC-VNSDILIILLPNKVIAYHVKAQK 380 (407)
Q Consensus 308 G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~------~~~~~~~~~~-~~g~~lll~~~~~l~~yd~~t~~ 380 (407)
|++.+.+.. .....+|+...+. ....+......... .......+.+ .+|..++....+.+..||+.++.
T Consensus 755 ~~~l~s~s~--dg~v~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~ 830 (1249)
T 3sfz_A 755 DELLASCSA--DGTLRLWDVRSAN--ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSG 830 (1249)
T ss_dssp TTEEEEEES--SSEEEEEEGGGTE--EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCC
T ss_pred CCEEEEEEC--CCeEEEEeCCCCc--ccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCC
Confidence 554444333 1223334432221 12222221100000 0011223334 47778887778899999999887
Q ss_pred EEEec
Q 015428 381 MQVVS 385 (407)
Q Consensus 381 ~~~l~ 385 (407)
.....
T Consensus 831 ~~~~~ 835 (1249)
T 3sfz_A 831 LLAEI 835 (1249)
T ss_dssp EEEEE
T ss_pred ceeEE
Confidence 65443
No 95
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=33.74 E-value=2.4e+02 Score=24.67 Aligned_cols=34 Identities=9% Similarity=0.310 Sum_probs=22.6
Q ss_pred eEEEe-ecCCEEEEec--CCEEEEE--ECCCCeEEEecc
Q 015428 353 RVLTC-VNSDILIILL--PNKVIAY--HVKAQKMQVVSE 386 (407)
Q Consensus 353 ~~~~~-~~g~~lll~~--~~~l~~y--d~~t~~~~~l~~ 386 (407)
..+++ .+|+.|++.. ...+..| |.++++++.+..
T Consensus 289 ~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 289 RDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp CEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred CeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEeccc
Confidence 45566 4677666643 2556666 888999887764
No 96
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=33.60 E-value=2.6e+02 Score=24.97 Aligned_cols=199 Identities=8% Similarity=-0.038 Sum_probs=0.0
Q ss_pred ecCceEEEeeecccC------CeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcc
Q 015428 156 TCNGLVCCQSVFEVG------NFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVS 229 (407)
Q Consensus 156 s~~GLll~~~~~~~~------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~ 229 (407)
|.+|-+++.. .. ...+.+|+..++....-..............+.|.|. + +++......
T Consensus 51 SpDG~~las~---s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d----~---~~l~~s~dg----- 115 (357)
T 4g56_B 51 RRDGALLLAA---SSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSE----K---GILVASDSG----- 115 (357)
T ss_dssp CSSSCEEEEE---ECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETT----T---EEEEEETTS-----
T ss_pred CCCCCEEEEE---cCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCC----C---CEEEEECCC-----
Q ss_pred eEEEEEEeCCCCcccccCCCCCCCcccccccceEEECCEEEEEec-CCcEEEEEcCCCeE-eeEeCCCCCCCCccEEEec
Q 015428 230 IIFFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYWTSL-SGAILVFDLKDEQY-GILPLPARSGPYGALTQMH 307 (407)
Q Consensus 230 ~~~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~-~~~Il~fD~~~e~~-~~i~lP~~~~~~~~l~~~~ 307 (407)
.+.+|+..++.-.................-...-+|.....+. ++.|..+|+.+.+. ..+......-........+
T Consensus 116 --~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 116 --AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp --CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC
T ss_pred --EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC
Q ss_pred CeEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCCEEEE--ecCCEEEEEECCCCe
Q 015428 308 GELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSDILII--LLPNKVIAYHVKAQK 380 (407)
Q Consensus 308 G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll--~~~~~l~~yd~~t~~ 380 (407)
..+.+.... .....+|+....+-.......... .....+.+ .+++.++. ..+..+..||+++.+
T Consensus 194 ~~~~~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~-------~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 194 DTIFLSCGE--DGRILLWDTRKPKPATRIDFCASD-------TIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD 260 (357)
T ss_dssp SSCEEEEET--TSCEEECCTTSSSCBCBCCCTTCC-------SCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG
T ss_pred Cceeeeecc--CCceEEEECCCCceeeeeeecccc-------ccccchhhhhcccceEEEeecccceeEEECCCCc
No 97
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=32.02 E-value=1.5e+02 Score=22.20 Aligned_cols=42 Identities=12% Similarity=0.154 Sum_probs=28.2
Q ss_pred eEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEE
Q 015428 172 FFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAV 221 (407)
Q Consensus 172 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~ 221 (407)
-.+++++|.|+.|...-... -...+.+..|.. .+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~~~----g~s~V~~~~d~~----~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKWVPAGGST----GFSRVHIYHHTG----NNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEEEEGGGCC----SCEEEEEEEETT----TTEEEEEEEE
T ss_pred EEEEEEcCCCCceEECCCCC----CceEEEEEEECC----CCEEEEEEEE
Confidence 56889999999774433211 123467788876 5789998775
No 98
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=31.97 E-value=2.5e+02 Score=24.25 Aligned_cols=185 Identities=8% Similarity=-0.044 Sum_probs=89.7
Q ss_pred CceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEe
Q 015428 158 NGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYS 237 (407)
Q Consensus 158 ~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~ 237 (407)
.+.+++.. .....+.++|+.|++....-... .... .+.++|. +++- ++.... + ..+.+|+
T Consensus 9 ~~~~~v~~---~~~~~v~~~d~~~~~~~~~~~~~----~~~~-~~~~s~d-----g~~l-~~~~~~---~---~~i~~~d 68 (331)
T 3u4y_A 9 SNFGIVVE---QHLRRISFFSTDTLEILNQITLG----YDFV-DTAITSD-----CSNV-VVTSDF---C---QTLVQIE 68 (331)
T ss_dssp CCEEEEEE---GGGTEEEEEETTTCCEEEEEECC----CCEE-EEEECSS-----SCEE-EEEEST---T---CEEEEEE
T ss_pred CCEEEEEe---cCCCeEEEEeCcccceeeeEEcc----CCcc-eEEEcCC-----CCEE-EEEeCC---C---CeEEEEE
Confidence 45555544 34568899999999875533222 1122 6778876 4433 333221 1 2788899
Q ss_pred CCCCcc-c-ccCCCCCCCcccccccceEEE--CC-EEEEEecCC----cEEEEEcCCCeE-eeEeCCCCCCCCccEEEe-
Q 015428 238 SRSRSW-R-TTDTICSEPDVLKLSINGFYM--KG-FVYWTSLSG----AILVFDLKDEQY-GILPLPARSGPYGALTQM- 306 (407)
Q Consensus 238 s~t~~W-~-~~~~~~~~~~~~~~~~~~v~~--~G-~lYwl~~~~----~Il~fD~~~e~~-~~i~lP~~~~~~~~l~~~- 306 (407)
..++.- . ...... ....++.+ +| .+| ..... .|..+|+.+.+. ..++.... . ..+...
T Consensus 69 ~~~~~~~~~~~~~~~-------~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~--~-~~~~~sp 137 (331)
T 3u4y_A 69 TQLEPPKVVAIQEGQ-------SSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIPYD--A-VGIAISP 137 (331)
T ss_dssp CSSSSCEEEEEEECS-------SCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECCTT--E-EEEEECT
T ss_pred CCCCceeEEecccCC-------CCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECCCC--c-cceEECC
Confidence 888764 1 111100 01121222 34 455 44433 899999987655 33343221 1 123332
Q ss_pred cCe-EEEEeeeCC--CceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCCEEEEec--CCEEEEEECCCCe
Q 015428 307 HGE-LCYMLPQIQ--DGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSDILIILL--PNKVIAYHVKAQK 380 (407)
Q Consensus 307 ~G~-L~~v~~~~~--~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll~~--~~~l~~yd~~t~~ 380 (407)
+|+ |++.....+ ..+|.+. ..+.........+. .+ .....+.+ .+|+.+++.. +..+..||+++++
T Consensus 138 dg~~l~~~~~~~~~~i~~~~~~--~~g~~~~~~~~~~~---~~---~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 138 NGNGLILIDRSSANTVRRFKID--ADGVLFDTGQEFIS---GG---TRPFNITFTPDGNFAFVANLIGNSIGILETQNPE 209 (331)
T ss_dssp TSSCEEEEEETTTTEEEEEEEC--TTCCEEEEEEEEEC---SS---SSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT
T ss_pred CCCEEEEEecCCCceEEEEEEC--CCCcEeecCCcccc---CC---CCccceEECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 565 444443321 2234332 11111000001111 11 12234455 3677666543 4789999999877
Q ss_pred E
Q 015428 381 M 381 (407)
Q Consensus 381 ~ 381 (407)
.
T Consensus 210 ~ 210 (331)
T 3u4y_A 210 N 210 (331)
T ss_dssp S
T ss_pred c
Confidence 4
No 99
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=31.59 E-value=2.3e+02 Score=28.59 Aligned_cols=79 Identities=9% Similarity=0.090 Sum_probs=51.0
Q ss_pred EEEEEEeCCCCc--ccccCCCCCCCcccccccceE-EECCEEEEEecCCcEEEEEcCCC-eEeeEeCCCCCCCCccEEEe
Q 015428 231 IFFEIYSSRSRS--WRTTDTICSEPDVLKLSINGF-YMKGFVYWTSLSGAILVFDLKDE-QYGILPLPARSGPYGALTQM 306 (407)
Q Consensus 231 ~~~~vy~s~t~~--W~~~~~~~~~~~~~~~~~~~v-~~~G~lYwl~~~~~Il~fD~~~e-~~~~i~lP~~~~~~~~l~~~ 306 (407)
-.+..+|..|++ |+.....+ .....+ ..+|.+|.-+.++.|.+||.++. ....+++|.........-+.
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~-------~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~ 527 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTI-------FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSV 527 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSS-------CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred eeEEEEECCCCCeEeEccCCCC-------ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEE
Confidence 467788998874 88643221 111223 34567777667899999999875 33456777665433333368
Q ss_pred cCeEEEEeee
Q 015428 307 HGELCYMLPQ 316 (407)
Q Consensus 307 ~G~L~~v~~~ 316 (407)
+|+.+++...
T Consensus 528 ~G~qyv~~~~ 537 (689)
T 1yiq_A 528 DGEQYVTFMA 537 (689)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 9999988765
No 100
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=31.49 E-value=3.1e+02 Score=25.18 Aligned_cols=90 Identities=8% Similarity=-0.005 Sum_probs=44.0
Q ss_pred EEEEEeCCCCcccccCCCCCCCcccccccceEEECCEEEEEecCCcEEEEEcCCCeEeeEeCCCCCCCCccEEEecCeEE
Q 015428 232 FFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMKGFVYWTSLSGAILVFDLKDEQYGILPLPARSGPYGALTQMHGELC 311 (407)
Q Consensus 232 ~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~~G~L~ 311 (407)
.+.+|+..++.-...... . ..........+|.+-..+.++.|..+|+.+.+.-..........-..+.-.++.|.
T Consensus 373 ~v~vwd~~~~~~~~~~~~--~---~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~ 447 (464)
T 3v7d_B 373 SIRGWDANDYSRKFSYHH--T---NLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLV 447 (464)
T ss_dssp EEEEEETTTCCEEEEEEC--T---TCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEE
T ss_pred cEEEEECCCCceeeeecC--C---CCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEE
Confidence 678888877542211100 0 00122344556665555567899999999876543222222221123333344555
Q ss_pred EEeeeCCCceEEEEE
Q 015428 312 YMLPQIQDGECLIGV 326 (407)
Q Consensus 312 ~v~~~~~~~~w~l~~ 326 (407)
++........|.+.+
T Consensus 448 ~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 448 AAVEKDGQSFLEILD 462 (464)
T ss_dssp EEEEETTEEEEEEEE
T ss_pred EEEEeCCeEEEEEee
Confidence 554443333444443
No 101
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=31.14 E-value=2.9e+02 Score=24.82 Aligned_cols=138 Identities=14% Similarity=0.053 Sum_probs=67.5
Q ss_pred CceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEe
Q 015428 158 NGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYS 237 (407)
Q Consensus 158 ~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~ 237 (407)
.+.|++.. ...+...++-+.....+-.. .....++.+|+. .+ +|+..... ...+..++
T Consensus 44 ~~~ll~~~-----~~~I~~i~~~g~~~~~~~~~-----~~~~~~l~~d~~----~~--~ly~~D~~------~~~I~r~~ 101 (349)
T 3v64_C 44 EPVLLFAN-----RIDIRQVLPHRSEYTLLLNN-----LENAIALDFHHR----RE--LVFWSDVT------LDRILRAN 101 (349)
T ss_dssp CCEEEEEC-----BSCEEEECTTSCCEEEEECS-----CSCEEEEEEETT----TT--EEEEEETT------TTEEEEEE
T ss_pred CceeEeec-----ccceEEEeCCCCeeEEeecC-----CCceEEEEEecc----cc--EEEEEecc------CCceEEEe
Confidence 45565543 23466677766655443221 123477888865 22 33332211 12466666
Q ss_pred CCCCcccccCCCCCCCcccccccceEEE---CCEEEEEec-CCcEEEEEcCCCeEeeEeCCCCCCCCccEEEe--cCeEE
Q 015428 238 SRSRSWRTTDTICSEPDVLKLSINGFYM---KGFVYWTSL-SGAILVFDLKDEQYGILPLPARSGPYGALTQM--HGELC 311 (407)
Q Consensus 238 s~t~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lYwl~~-~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~--~G~L~ 311 (407)
.....-+.+..... ....++.+ +|.+||... .+.|.++|+....-..+- ......-..++.- +|.|+
T Consensus 102 ~~g~~~~~~~~~~~------~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~-~~~l~~P~~iavdp~~g~ly 174 (349)
T 3v64_C 102 LNGSNVEEVVSTGL------ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGTIY 174 (349)
T ss_dssp TTSCSCEEEECSSC------SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CTTCSCEEEEEEETTTTEEE
T ss_pred cCCCCceEEEeCCC------CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE-eCCCCCcceEEEecCcCeEE
Confidence 66554333211100 01134444 689999764 578999999875443332 1111111233333 56666
Q ss_pred EEeeeCCCceEEE
Q 015428 312 YMLPQIQDGECLI 324 (407)
Q Consensus 312 ~v~~~~~~~~w~l 324 (407)
+........++.+
T Consensus 175 ~td~~~~~~I~r~ 187 (349)
T 3v64_C 175 WTDWGNTPRIEAS 187 (349)
T ss_dssp EEECSSSCEEEEE
T ss_pred EeccCCCCEEEEE
Confidence 6544322344444
No 102
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=30.27 E-value=4.5e+02 Score=26.65 Aligned_cols=203 Identities=11% Similarity=0.054 Sum_probs=96.5
Q ss_pred eecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcC----CCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcce
Q 015428 155 TTCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFF----HGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSI 230 (407)
Q Consensus 155 ~s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~----~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~ 230 (407)
...+|-|.+.. ....+..+||.|+++...+..+.. ........+..|+. +. ++-++.. +
T Consensus 364 ~d~~g~lWiGt----~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-----g~--~lWigt~---~--- 426 (795)
T 4a2l_A 364 EDKDKNLWIGT----NDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK-----KS--LVYIGTH---A--- 426 (795)
T ss_dssp ECTTSCEEEEE----SSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT-----TT--EEEEEET---T---
T ss_pred ECCCCCEEEEE----CCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC-----CC--EEEEEeC---c---
Confidence 34456555543 224578889998888776543210 01123344555543 22 1122221 1
Q ss_pred EEEEEEeCCCCcccccCCCCCCCcccccccceEEE--CCEEEEEecCCcEEEEEcCCCeEeeEeCC---CCCC-CC-ccE
Q 015428 231 IFFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYM--KGFVYWTSLSGAILVFDLKDEQYGILPLP---ARSG-PY-GAL 303 (407)
Q Consensus 231 ~~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lYwl~~~~~Il~fD~~~e~~~~i~lP---~~~~-~~-~~l 303 (407)
..+..|+..++.++........... ....+++. +|.+ |++....|..||+.+.+|..+... .... .. ..+
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~--~~v~~i~~d~~g~l-wigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 503 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVN--ENVYAILPDGEGNL-WLGTLSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTL 503 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSC--SCEEEEEECSSSCE-EEEESSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEE
T ss_pred CceeEEeCCCCcEEEeecCCCCcCC--CeeEEEEECCCCCE-EEEecCceeEEeCCCCeEEEccccccccccCCceEEEE
Confidence 1467888888877665421111000 11123333 4665 444447899999999999876533 1111 00 122
Q ss_pred EE-ecCeEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEeecCCEEEEecCCEEEEEECCCCeEE
Q 015428 304 TQ-MHGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCVNSDILIILLPNKVIAYHVKAQKMQ 382 (407)
Q Consensus 304 ~~-~~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~lll~~~~~l~~yd~~t~~~~ 382 (407)
.+ .+|+|.+.+. . .+..+.. ....+ .+.......+........+....++.|.+.+...|+.||.++++++
T Consensus 504 ~~d~~g~lWigt~-~--Gl~~~~~-~~~~~----~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~d~~~~~~~ 575 (795)
T 4a2l_A 504 FRDSHKRLWIGGE-E--GLSVFKQ-EGLDI----QKASILPVSNVTKLFTNCIYEASNGIIWVGTREGFYCFNEKDKQIK 575 (795)
T ss_dssp EECTTCCEEEEES-S--CEEEEEE-ETTEE----EECCCSCSCGGGGSCEEEEEECTTSCEEEEESSCEEEEETTTTEEE
T ss_pred EECCCCCEEEEeC-C--ceEEEeC-CCCeE----EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCCCceeECCCCCcEE
Confidence 22 2456665554 1 2222211 11111 1110000000000122233333344556666569999999999988
Q ss_pred Eec
Q 015428 383 VVS 385 (407)
Q Consensus 383 ~l~ 385 (407)
...
T Consensus 576 ~~~ 578 (795)
T 4a2l_A 576 RYN 578 (795)
T ss_dssp EEC
T ss_pred EeC
Confidence 764
No 103
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=30.02 E-value=4.5e+02 Score=26.65 Aligned_cols=117 Identities=11% Similarity=0.229 Sum_probs=61.6
Q ss_pred EEECCEEEEEe-----------cCCcEEEEEcCC--------CeEeeEeCCCCCCCCccEEEecCeEEEEeeeCCCceEE
Q 015428 263 FYMKGFVYWTS-----------LSGAILVFDLKD--------EQYGILPLPARSGPYGALTQMHGELCYMLPQIQDGECL 323 (407)
Q Consensus 263 v~~~G~lYwl~-----------~~~~Il~fD~~~--------e~~~~i~lP~~~~~~~~l~~~~G~L~~v~~~~~~~~w~ 323 (407)
-+.+|.+|... ..+.|++.|+.+ ..|+.+-.|.....-..+...++.|.+...........
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~l~ 375 (711)
T 4hvt_A 296 GSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNVVAKVV 375 (711)
T ss_dssp EEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETTEEEEE
T ss_pred eeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEEECCEEEEE
Confidence 46688998854 246799999875 36877655554322123444567776665553222222
Q ss_pred EEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCC-EEEEe----cCCEEEEEECCCCeEEEecc
Q 015428 324 IGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSD-ILIIL----LPNKVIAYHVKAQKMQVVSE 386 (407)
Q Consensus 324 l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~-~lll~----~~~~l~~yd~~t~~~~~l~~ 386 (407)
+.+...+.|..+..+.++. . +.+..+.. .+++ +++.. ....++.||+. ++.+.+..
T Consensus 376 ~~~~~~g~~~~~~~i~lp~--~----~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~ 437 (711)
T 4hvt_A 376 TFTLENEQWTKPVVLKLPY--Q----NAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKIIRK 437 (711)
T ss_dssp EECEETTEECCCEEECCCS--T----TCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEEC
T ss_pred EEECCCCceEEEeccCCCC--C----eEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEec
Confidence 2222234454433344431 1 11222222 2333 44433 34789999998 77776654
No 104
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=29.11 E-value=5.5e+02 Score=27.38 Aligned_cols=177 Identities=6% Similarity=-0.022 Sum_probs=82.8
Q ss_pred CCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCcccccCCC
Q 015428 170 GNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRSWRTTDTI 249 (407)
Q Consensus 170 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~ 249 (407)
..+.+.+||..+++........ ......+.+.|. +.+-+ .... + ..+.+|+..++........
T Consensus 981 ~~g~i~i~d~~~~~~~~~~~~h----~~~v~~l~~s~d-----g~~l~-s~~~----d---g~i~vwd~~~~~~~~~~~~ 1043 (1249)
T 3sfz_A 981 EDGAIKIIELPNNRVFSSGVGH----KKAVRHIQFTAD-----GKTLI-SSSE----D---SVIQVWNWQTGDYVFLQAH 1043 (1249)
T ss_dssp TTSCCEEEETTTTSCEEECCCC----SSCCCCEEECSS-----SSCEE-EECS----S---SBEEEEETTTTEEECCBCC
T ss_pred CCCCEEEEEcCCCceeeecccC----CCceEEEEECCC-----CCEEE-EEcC----C---CEEEEEECCCCceEEEecC
Confidence 3456778887777654432211 112234556654 33322 2221 1 2578899888776543321
Q ss_pred CCCCcccccccceEEECCEEEEEecCCcEEEEEcCCCeE-eeEeCCCCCCCCccEEE-ecCeEEEEee-eCCCceEEEEE
Q 015428 250 CSEPDVLKLSINGFYMKGFVYWTSLSGAILVFDLKDEQY-GILPLPARSGPYGALTQ-MHGELCYMLP-QIQDGECLIGV 326 (407)
Q Consensus 250 ~~~~~~~~~~~~~v~~~G~lYwl~~~~~Il~fD~~~e~~-~~i~lP~~~~~~~~l~~-~~G~L~~v~~-~~~~~~w~l~~ 326 (407)
... ...-...-+|.+.-.+.++.|..+|+.+.+. ..+...... -..+.. -+|++.++.. +....+|.+
T Consensus 1044 ~~~-----v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~--v~~~~~s~d~~~l~s~s~d~~v~iwd~-- 1114 (1249)
T 3sfz_A 1044 QET-----VKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGT--VLSCAISSDATKFSSTSADKTAKIWSF-- 1114 (1249)
T ss_dssp SSC-----EEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSC--CCCEEECSSSSSCEEECCSSCCCEECS--
T ss_pred CCc-----EEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCc--EEEEEECCCCCEEEEEcCCCcEEEEEC--
Confidence 110 0011111256665556678999999987653 223322211 112222 2444433332 223344432
Q ss_pred cCCccceeeEeeeeecccccCcCCcceEEEe-ecCCEEEEec-CCEEEEEECCCCeEE
Q 015428 327 YGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSDILIILL-PNKVIAYHVKAQKMQ 382 (407)
Q Consensus 327 ~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll~~-~~~l~~yd~~t~~~~ 382 (407)
..+. ....+ .++ .+....+++ .+|..|+... ++.+..||+.+++..
T Consensus 1115 -~~~~--~~~~l------~~h-~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~ 1162 (1249)
T 3sfz_A 1115 -DLLS--PLHEL------KGH-NGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLL 1162 (1249)
T ss_dssp -SSSS--CSBCC------CCC-SSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCC
T ss_pred -CCcc--eeeee------ccC-CCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceE
Confidence 1111 11111 111 122344555 3666666544 567889999887643
No 105
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=28.31 E-value=5.1e+02 Score=26.68 Aligned_cols=64 Identities=16% Similarity=0.184 Sum_probs=36.8
Q ss_pred ceEEE---CCEEEEEec-CCcEEEEEcCCCeEee-EeCCCCCCCCccEEEecCeEEEEeeeCCCceEEEE
Q 015428 261 NGFYM---KGFVYWTSL-SGAILVFDLKDEQYGI-LPLPARSGPYGALTQMHGELCYMLPQIQDGECLIG 325 (407)
Q Consensus 261 ~~v~~---~G~lYwl~~-~~~Il~fD~~~e~~~~-i~lP~~~~~~~~l~~~~G~L~~v~~~~~~~~w~l~ 325 (407)
.++.+ +|.|||.-. ...|.++|+....-.. +..+.....-..|...+++|+++... ...++.+.
T Consensus 561 ~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~-~~~I~~~d 629 (791)
T 3m0c_C 561 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII-NEAIFSAN 629 (791)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT-TTEEEEEE
T ss_pred eEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECC-CCEEEEEe
Confidence 34554 589999854 5689999997654333 33222222222456667777776543 24455554
No 106
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=28.31 E-value=1.4e+02 Score=22.69 Aligned_cols=40 Identities=15% Similarity=0.377 Sum_probs=28.2
Q ss_pred eEEEEEcCccc-ceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEE
Q 015428 172 FFYYICNPVTK-EWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAV 221 (407)
Q Consensus 172 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~ 221 (407)
-.+++.||.|+ .|...-... ..+.+.+|+. .+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p~g~~~------~~V~~~~d~~----~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKHA------VTVSYFYDST----RNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEESCSSC------EEEEEEEETT----TTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCCc------eEEEEEEcCC----CCEEEEEEcc
Confidence 56889999996 885433321 3466777876 5779999865
No 107
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=26.91 E-value=3.1e+02 Score=27.51 Aligned_cols=79 Identities=6% Similarity=0.053 Sum_probs=50.6
Q ss_pred EEEEEEeCCCC--cccccCCCCCCCcccccccceEE-ECCEEEEEecCCcEEEEEcCCC-eEeeEeCCCCCCCCccEEEe
Q 015428 231 IFFEIYSSRSR--SWRTTDTICSEPDVLKLSINGFY-MKGFVYWTSLSGAILVFDLKDE-QYGILPLPARSGPYGALTQM 306 (407)
Q Consensus 231 ~~~~vy~s~t~--~W~~~~~~~~~~~~~~~~~~~v~-~~G~lYwl~~~~~Il~fD~~~e-~~~~i~lP~~~~~~~~l~~~ 306 (407)
-.+..+|..|+ .|+.....+ .....+. .+|.+|.-+.++.+.+||..+. ....+.+|.........-+.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~-------~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~ 529 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSP-------WNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMV 529 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSS-------CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCCC-------CcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEe
Confidence 56777898887 487643211 1123333 3567777666899999999864 44567888754433344457
Q ss_pred cCeEEEEeee
Q 015428 307 HGELCYMLPQ 316 (407)
Q Consensus 307 ~G~L~~v~~~ 316 (407)
+|+.+++...
T Consensus 530 ~G~~~v~~~~ 539 (677)
T 1kb0_A 530 DGRQYVSVAV 539 (677)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEEec
Confidence 8998887644
No 108
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=26.65 E-value=3.3e+02 Score=23.95 Aligned_cols=58 Identities=19% Similarity=0.146 Sum_probs=31.7
Q ss_pred CCEEEEEec-CCcEEEEEcCCCeEeeEeCCCCCCCCccEEE--ecCeEEEEeeeCCCceEEE
Q 015428 266 KGFVYWTSL-SGAILVFDLKDEQYGILPLPARSGPYGALTQ--MHGELCYMLPQIQDGECLI 324 (407)
Q Consensus 266 ~G~lYwl~~-~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~--~~G~L~~v~~~~~~~~w~l 324 (407)
+|.+||... .+.|.++|+....-..+- ......-..++. .+|.|+++.......++.+
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~-~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~ 148 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 148 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEE-ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEE-ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEE
Confidence 689999854 578999999875443332 111111123433 2567776654322344444
No 109
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=25.38 E-value=3.9e+02 Score=24.43 Aligned_cols=100 Identities=8% Similarity=-0.024 Sum_probs=54.7
Q ss_pred CeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCcccccCCCC
Q 015428 171 NFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRSWRTTDTIC 250 (407)
Q Consensus 171 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~ 250 (407)
...++++|..+++...+.... .....+.+.|. +++-++.-. +.....+.+++..++..+.+....
T Consensus 290 ~~~i~~~d~~~~~~~~l~~~~-----~~~~~~~~spd-----G~~l~~~~~-----~~g~~~i~~~d~~~~~~~~l~~~~ 354 (415)
T 2hqs_A 290 RPQVYKVNINGGAPQRITWEG-----SQNQDADVSSD-----GKFMVMVSS-----NGGQQHIAKQDLATGGVQVLSSTF 354 (415)
T ss_dssp SCEEEEEETTSSCCEECCCSS-----SEEEEEEECTT-----SSEEEEEEE-----CSSCEEEEEEETTTCCEEECCCSS
T ss_pred CcEEEEEECCCCCEEEEecCC-----CcccCeEECCC-----CCEEEEEEC-----cCCceEEEEEECCCCCEEEecCCC
Confidence 347888999888866654321 12345667765 454433322 112457889999998876554321
Q ss_pred CCCcccccccceEEECCE-EEEEecCC---cEEEEEcCCCeEeeE
Q 015428 251 SEPDVLKLSINGFYMKGF-VYWTSLSG---AILVFDLKDEQYGIL 291 (407)
Q Consensus 251 ~~~~~~~~~~~~v~~~G~-lYwl~~~~---~Il~fD~~~e~~~~i 291 (407)
. .......-+|. +++.+.++ .|..+|+.++....+
T Consensus 355 --~----~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 355 --L----DETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp --S----CEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred --C----cCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence 0 11111112443 44444333 688888876665544
No 110
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=24.97 E-value=4.1e+02 Score=24.47 Aligned_cols=114 Identities=9% Similarity=0.022 Sum_probs=0.0
Q ss_pred CCEEEEEec-CCcEEEEEcCCCeEeeEeCCCCCCCCccEEEecCeEEEEeeeCCCceEEEEEcCCccceeeEeeeeeccc
Q 015428 266 KGFVYWTSL-SGAILVFDLKDEQYGILPLPARSGPYGALTQMHGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEV 344 (407)
Q Consensus 266 ~G~lYwl~~-~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~ 344 (407)
+|.|||... ...|..||+.+.....+........ ..+..-++.|+++.......+|.+. ....|.....-.+....
T Consensus 141 ~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d--~~~~~~~~~~g~~~~~~ 217 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYM--KASGWAPTRIGQLGSTF 217 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEE--GGGTTCEEEEEECCTTS
T ss_pred CCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEE--cCCCceeEEeeeccchh
Q ss_pred ccCcCCcceEEEeecCCEEEEecCCEEEEEECCCCeEEEe
Q 015428 345 LGETFSDCRVLTCVNSDILIILLPNKVIAYHVKAQKMQVV 384 (407)
Q Consensus 345 ~~~~~~~~~~~~~~~g~~lll~~~~~l~~yd~~t~~~~~l 384 (407)
... +....+.-.++.+.+......++.||+++++...+
T Consensus 218 ~~~--p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 218 SGK--IGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CSC--CCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred cCC--cEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
No 111
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=24.95 E-value=3e+02 Score=22.85 Aligned_cols=111 Identities=14% Similarity=0.080 Sum_probs=60.8
Q ss_pred EEeecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEE
Q 015428 153 IRTTCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIF 232 (407)
Q Consensus 153 i~~s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~ 232 (407)
+.-..+|.+.+.. . ...++++||-++....++... .....++.+++. +. ++..... ...
T Consensus 72 i~~~~~g~l~v~~---~-~~~i~~~d~~~~~~~~~~~~~----~~~p~~i~~~~~-----g~--l~v~~~~------~~~ 130 (270)
T 1rwi_B 72 LAVDGAGTVYVTD---F-NNRVVTLAAGSNNQTVLPFDG----LNYPEGLAVDTQ-----GA--VYVADRG------NNR 130 (270)
T ss_dssp EEECTTCCEEEEE---T-TTEEEEECTTCSCCEECCCCS----CSSEEEEEECTT-----CC--EEEEEGG------GTE
T ss_pred eEECCCCCEEEEc---C-CCEEEEEeCCCceEeeeecCC----cCCCcceEECCC-----CC--EEEEECC------CCE
Confidence 4334467766654 2 467899999888776665322 123356778875 32 3332211 125
Q ss_pred EEEEeCCCCcccccCCCCCCCcccccccceEEE--CCEEEEEec-CCcEEEEEcCCCeEee
Q 015428 233 FEIYSSRSRSWRTTDTICSEPDVLKLSINGFYM--KGFVYWTSL-SGAILVFDLKDEQYGI 290 (407)
Q Consensus 233 ~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lYwl~~-~~~Il~fD~~~e~~~~ 290 (407)
+.+|+.++......... . . ....++.+ +|.+|+... .+.|..||..+.....
T Consensus 131 i~~~~~~~~~~~~~~~~--~---~-~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~ 185 (270)
T 1rwi_B 131 VVKLAAGSKTQTVLPFT--G---L-NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV 185 (270)
T ss_dssp EEEECTTCCSCEECCCC--S---C-CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE
T ss_pred EEEEECCCceeEeeccc--c---C-CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe
Confidence 66676665544322111 0 0 01133444 588777654 4789999998765443
No 112
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=24.46 E-value=5.3e+02 Score=25.90 Aligned_cols=107 Identities=12% Similarity=0.169 Sum_probs=51.2
Q ss_pred CCEEEEEecCCcEEEEEcCCCeEeeEeCCCCCCC--CccEEEecCeEEEEeeeCCCceEEEEEcCCccceeeEeeeeecc
Q 015428 266 KGFVYWTSLSGAILVFDLKDEQYGILPLPARSGP--YGALTQMHGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHE 343 (407)
Q Consensus 266 ~G~lYwl~~~~~Il~fD~~~e~~~~i~lP~~~~~--~~~l~~~~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~ 343 (407)
+|.| |++....+..||..+++|.. |..... -..+...+|.|.+.+.. .+.... ..... .+ .+....
T Consensus 73 ~g~l-WigT~~Gl~~yd~~~~~f~~---~~~~~~~~i~~i~~~~g~lWigt~~---Gl~~~~-~~~~~--~~-~~~~~~- 140 (758)
T 3ott_A 73 NTYL-YMGTDNGILVYNYRADRYEQ---PETDFPTDVRTMALQGDTLWLGALN---GLYTYQ-LQSRK--LT-SFDTRR- 140 (758)
T ss_dssp TTEE-EEEETTEEEEEETTTTEECC---CSCCCCSCEEEEEEETTEEEEEETT---EEEEEE-TTTCC--EE-EECHHH-
T ss_pred CCcE-EEEeCCCeEEEeCCCCEEEC---cccCCCceEEEEEecCCcEEEEcCC---cceeEe-CCCCe--EE-EeccCC-
Confidence 4655 55556779999999998865 211111 11233345665554321 222211 11111 11 110000
Q ss_pred cccCcCCcceEEEeecCCEEEEecCCEEEEEECCCCeEEEec
Q 015428 344 VLGETFSDCRVLTCVNSDILIILLPNKVIAYHVKAQKMQVVS 385 (407)
Q Consensus 344 ~~~~~~~~~~~~~~~~g~~lll~~~~~l~~yd~~t~~~~~l~ 385 (407)
.+........+....++.|.+.+...|+.||.++++++.+.
T Consensus 141 -~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~ 181 (758)
T 3ott_A 141 -NGLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFEGIP 181 (758)
T ss_dssp -HCCSCSCEEEEEECTTCCEEEEETTEEEEEETTTTEEEEEC
T ss_pred -CCcCCCeEEEEEEcCCCCEEEEeCCCHhhCccCCCceEEec
Confidence 00000112223333344556666678999999998887654
No 113
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=24.04 E-value=3.2e+02 Score=22.92 Aligned_cols=194 Identities=11% Similarity=0.040 Sum_probs=96.0
Q ss_pred eEEeecCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceE
Q 015428 152 NIRTTCNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSII 231 (407)
Q Consensus 152 ~i~~s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~ 231 (407)
.+....+|.+.+.. .....+.++||. ++...++.+.. .....++.+++. +. +...... ..
T Consensus 24 ~i~~d~~g~l~v~~---~~~~~v~~~~~~-~~~~~~~~~~~---~~~~~~i~~~~~-----g~--l~v~~~~------~~ 83 (300)
T 2qc5_A 24 GITSSEDGKVWFTQ---HKANKISSLDQS-GRIKEFEVPTP---DAKVMCLIVSSL-----GD--IWFTENG------AN 83 (300)
T ss_dssp EEEECTTSCEEEEE---TTTTEEEEECTT-SCEEEEECSST---TCCEEEEEECTT-----SC--EEEEETT------TT
T ss_pred eeeECCCCCEEEEc---CCCCeEEEECCC-CceEEEECCCC---CCcceeEEECCC-----CC--EEEEecC------CC
Confidence 34445567777754 245678899998 77766543321 123356667754 33 2222211 11
Q ss_pred EEEEEeCCCCcccccCCCCCCCcccccccceEEE--CCEEEEEec-CCcEEEEEcCCCeEeeEeCCCCCCCCccEEE-ec
Q 015428 232 FFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYM--KGFVYWTSL-SGAILVFDLKDEQYGILPLPARSGPYGALTQ-MH 307 (407)
Q Consensus 232 ~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lYwl~~-~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~-~~ 307 (407)
.+.+|+.. +.++...... .. ....++.+ +|.+|+... .+.|..||.. .++..+.+|.....-..+.. -+
T Consensus 84 ~v~~~d~~-g~~~~~~~~~-~~----~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 84 KIGKLSKK-GGFTEYPLPQ-PD----SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD 156 (300)
T ss_dssp EEEEECTT-SCEEEEECSS-TT----CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT
T ss_pred eEEEECCC-CCeEEecCCC-CC----CCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCC
Confidence 56777777 6665432110 00 11133444 588777654 5689999998 66666666643222223333 35
Q ss_pred CeEEEEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEee-cCCEEEEec-CCEEEEEECCCCeEEEe
Q 015428 308 GELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTCV-NSDILIILL-PNKVIAYHVKAQKMQVV 384 (407)
Q Consensus 308 G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~~-~g~~lll~~-~~~l~~yd~~t~~~~~l 384 (407)
|+|++.... ...++.+.. .+.. . .+.++ +. ......+++. +|.+.+... ...+..||. ++++...
T Consensus 157 g~l~v~~~~-~~~i~~~~~--~g~~--~-~~~~~----~~-~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 157 NALWFTENQ-NNSIGRITN--TGKL--E-EYPLP----TN-AAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEY 223 (300)
T ss_dssp SSEEEEETT-TTEEEEECT--TCCE--E-EEECS----ST-TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE
T ss_pred CCEEEEecC-CCeEEEECC--CCcE--E-EeeCC----CC-CCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEE
Confidence 776665432 223333321 1221 1 12221 00 0112334443 444443333 357888888 5555554
No 114
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=23.41 E-value=3.7e+02 Score=23.39 Aligned_cols=51 Identities=18% Similarity=0.330 Sum_probs=28.7
Q ss_pred EEEEEeCCCCcccccCCCCCCCcccccccceEEEC----C-EEEEEecCCcEEEEEcCCC
Q 015428 232 FFEIYSSRSRSWRTTDTICSEPDVLKLSINGFYMK----G-FVYWTSLSGAILVFDLKDE 286 (407)
Q Consensus 232 ~~~vy~s~t~~W~~~~~~~~~~~~~~~~~~~v~~~----G-~lYwl~~~~~Il~fD~~~e 286 (407)
.+.+|+..++.|.......... ....++.+. | .+..-+.++.|..+|+.+.
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHS----ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCS----SCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred EEEEEEcCCCceeEeeeecCCC----cceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 5788888888876544321111 111223332 3 3444455788999998875
No 115
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=23.33 E-value=3.7e+02 Score=23.41 Aligned_cols=105 Identities=10% Similarity=-0.041 Sum_probs=0.0
Q ss_pred CCEEEEEec---CCcEEEEEcCCCeE-eeEeCCCCCCCCccEEEecCeEEEEeeeCCCceEEEEEcCCccceeeEeeeee
Q 015428 266 KGFVYWTSL---SGAILVFDLKDEQY-GILPLPARSGPYGALTQMHGELCYMLPQIQDGECLIGVYGNLDMSLKCVIPVE 341 (407)
Q Consensus 266 ~G~lYwl~~---~~~Il~fD~~~e~~-~~i~lP~~~~~~~~l~~~~G~L~~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~ 341 (407)
+|.+|--+. ...|.++|+.+.+- ..+++|.... ..-+...+++|+++....+. +..++.........|...
T Consensus 31 dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~f-geGi~~~g~~lyv~t~~~~~----v~viD~~t~~v~~~i~~g 105 (266)
T 2iwa_A 31 NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYF-GEGLTLLNEKLYQVVWLKNI----GFIYDRRTLSNIKNFTHQ 105 (266)
T ss_dssp TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCC-EEEEEEETTEEEEEETTCSE----EEEEETTTTEEEEEEECC
T ss_pred CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcc-eEEEEEeCCEEEEEEecCCE----EEEEECCCCcEEEEEECC
Q ss_pred -cccccCcCCcceEEEeecCCEEEEecCCEEEEEECCCCeEEE
Q 015428 342 -HEVLGETFSDCRVLTCVNSDILIILLPNKVIAYHVKAQKMQV 383 (407)
Q Consensus 342 -~~~~~~~~~~~~~~~~~~g~~lll~~~~~l~~yd~~t~~~~~ 383 (407)
+.-.+ +....+.+++-+....+..+|++|.+...
T Consensus 106 ~~~g~g--------lt~Dg~~l~vs~gs~~l~viD~~t~~v~~ 140 (266)
T 2iwa_A 106 MKDGWG--------LATDGKILYGSDGTSILYEIDPHTFKLIK 140 (266)
T ss_dssp SSSCCE--------EEECSSSEEEECSSSEEEEECTTTCCEEE
T ss_pred CCCeEE--------EEECCCEEEEECCCCeEEEEECCCCcEEE
No 116
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=23.29 E-value=3.8e+02 Score=23.48 Aligned_cols=192 Identities=14% Similarity=0.117 Sum_probs=87.3
Q ss_pred ecCceEEEeeecccCCeEEEEEcCcccceee-cCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEE
Q 015428 156 TCNGLVCCQSVFEVGNFFYYICNPVTKEWHV-LPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFE 234 (407)
Q Consensus 156 s~~GLll~~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~ 234 (407)
+.+|-+++... ....+.|||..+++... ++.. ......+.+.|. +.|- +.... + ..+.
T Consensus 64 s~d~~~l~s~s---~Dg~v~iWd~~~~~~~~~~~~~-----~~~v~~~~~s~~-----~~~l-~s~~~----d---~~v~ 122 (340)
T 1got_B 64 GTDSRLLLSAS---QDGKLIIWDSYTTNKVHAIPLR-----SSWVMTCAYAPS-----GNYV-ACGGL----D---NICS 122 (340)
T ss_dssp CTTSSEEEEEE---TTTEEEEEETTTCCEEEEEECS-----SSCEEEEEECTT-----SSEE-EEEET----T---CEEE
T ss_pred CCCCCEEEEEe---CCCcEEEEECCCCCcceEeecC-----CccEEEEEECCC-----CCEE-EEEeC----C---CeEE
Confidence 44555555542 45678889988876543 2221 123456677765 4432 22221 1 2678
Q ss_pred EEeCCCCc--ccccCCCCCCCcccccccceEEECCEEEEEecCCcEEEEEcCCCeEeeEeCCCCCCCCccEEEe-cCeEE
Q 015428 235 IYSSRSRS--WRTTDTICSEPDVLKLSINGFYMKGFVYWTSLSGAILVFDLKDEQYGILPLPARSGPYGALTQM-HGELC 311 (407)
Q Consensus 235 vy~s~t~~--W~~~~~~~~~~~~~~~~~~~v~~~G~lYwl~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~-~G~L~ 311 (407)
+|+..++. .+...... ........-...-+|.+.--+.++.|..+|+.+...... +......-..+... +|++.
T Consensus 123 iw~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l 199 (340)
T 1got_B 123 IYNLKTREGNVRVSRELA--GHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTT-FTGHTGDVMSLSLAPDTRLF 199 (340)
T ss_dssp EEETTTCSBSCEEEEEEE--CCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEE-ECCCSSCEEEEEECTTSSEE
T ss_pred EEECccCCCcceeEEEec--CCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEE-EcCCCCceEEEEECCCCCEE
Confidence 88876643 11111000 000000111112356655445578899999988654322 11111111122222 45554
Q ss_pred EEeeeCCCceEEEEEcCCccceeeEeeeeecccccCcCCcceEEEe-ecCCEEEEe-cCCEEEEEECCCCeEE
Q 015428 312 YMLPQIQDGECLIGVYGNLDMSLKCVIPVEHEVLGETFSDCRVLTC-VNSDILIIL-LPNKVIAYHVKAQKMQ 382 (407)
Q Consensus 312 ~v~~~~~~~~w~l~~~~~~~W~~~~~i~l~~~~~~~~~~~~~~~~~-~~g~~lll~-~~~~l~~yd~~t~~~~ 382 (407)
+.... .....+|+...+. ....+. ++ ......+.+ .++..++.. .++.+..||+++++..
T Consensus 200 ~sg~~--d~~v~~wd~~~~~--~~~~~~------~h-~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 200 VSGAC--DASAKLWDVREGM--CRQTFT------GH-ESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261 (340)
T ss_dssp EEEET--TSCEEEEETTTCS--EEEEEC------CC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEeC--CCcEEEEECCCCe--eEEEEc------CC-cCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 44433 1222333332221 111111 11 122344455 356665554 3567888998876643
No 117
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=23.28 E-value=4.1e+02 Score=23.83 Aligned_cols=34 Identities=12% Similarity=0.252 Sum_probs=23.6
Q ss_pred ceEEEe-ecCCEEEEecCCEEEEEECCCCeEEEec
Q 015428 352 CRVLTC-VNSDILIILLPNKVIAYHVKAQKMQVVS 385 (407)
Q Consensus 352 ~~~~~~-~~g~~lll~~~~~l~~yd~~t~~~~~l~ 385 (407)
...+++ .+|+.++......+..||.++++++.+.
T Consensus 307 p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~ 341 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLR 341 (361)
T ss_dssp CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEE
T ss_pred eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeE
Confidence 345566 4778777765588999999998444443
No 118
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=23.08 E-value=2.1e+02 Score=21.47 Aligned_cols=57 Identities=16% Similarity=0.190 Sum_probs=34.1
Q ss_pred eEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEE
Q 015428 172 FFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIY 236 (407)
Q Consensus 172 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy 236 (407)
-.+++++|.|+.|. |......+ ...+.+..|.. .+.|+|+...-.. +..-...+++|
T Consensus 11 A~V~~~d~~~~~W~--p~~~g~~g-vs~V~~~~d~~----~~~yrI~~~~l~~-~~~vv~~~~l~ 67 (115)
T 1egx_A 11 ATVMLYDDGNKRWL--PAGTGPQA-FSRVQIYHNPT----ANSFRVVGRKMQP-DQQVVINCAIV 67 (115)
T ss_dssp EECBEECTTTSSCC--BSSCSCCC-CEEEEEEEETT----TTEEEEEEEESST-TCCEEEEEEEC
T ss_pred EEEEEEcCCCCcee--ECCCCCCC-ccEEEEEEeCC----CCEEEEEEEEcCC-CCEEEEeeEEc
Confidence 46789999999974 54321111 12467788876 6889998876321 12234445554
No 119
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=22.68 E-value=4.7e+02 Score=24.33 Aligned_cols=109 Identities=9% Similarity=0.056 Sum_probs=55.6
Q ss_pred CCEEEEEecCCcEEEEEcCCCeEeeEeCCCCCCCCccEEE-ecCe-EEEEeeeCC-CceEEEEEcCCccceeeEeeeeec
Q 015428 266 KGFVYWTSLSGAILVFDLKDEQYGILPLPARSGPYGALTQ-MHGE-LCYMLPQIQ-DGECLIGVYGNLDMSLKCVIPVEH 342 (407)
Q Consensus 266 ~G~lYwl~~~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~-~~G~-L~~v~~~~~-~~~w~l~~~~~~~W~~~~~i~l~~ 342 (407)
+|.||+......|..||+.+.....+-.+. ..-..+.. .+|+ |+++..... ...-.++....+.+.....+ .
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~--~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l--~- 223 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYSGL--SKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITEL--T- 223 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEECCC--SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEE--E-
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEecCC--CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeee--c-
Confidence 389999876588999999998876664211 11112332 2466 666554322 12112222122333222211 1
Q ss_pred ccccCcCCcceEEEeec-CCEEEEe--cCCEEEEEECCCCeEEEe
Q 015428 343 EVLGETFSDCRVLTCVN-SDILIIL--LPNKVIAYHVKAQKMQVV 384 (407)
Q Consensus 343 ~~~~~~~~~~~~~~~~~-g~~lll~--~~~~l~~yd~~t~~~~~l 384 (407)
. + .....+++.. ++.|++. ...+++.||+.+++...+
T Consensus 224 ~-~----~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 224 K-G----QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp E-C----SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred c-C----CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 0 1 1223344532 3444543 247899999998877444
No 120
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=22.48 E-value=54 Score=30.14 Aligned_cols=30 Identities=7% Similarity=0.256 Sum_probs=21.1
Q ss_pred ceEEECCEEEEEecCCcEEEEEcCCC--eEee
Q 015428 261 NGFYMKGFVYWTSLSGAILVFDLKDE--QYGI 290 (407)
Q Consensus 261 ~~v~~~G~lYwl~~~~~Il~fD~~~e--~~~~ 290 (407)
.++..+|.+|.-+.++.|.++|..+. .|+.
T Consensus 4 sP~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~ 35 (369)
T 2hz6_A 4 TVTLPETLLFVSTLDGSLHAVSKRTGSIKWTL 35 (369)
T ss_dssp ----CTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCeeeCCEEEEEcCCCEEEEEECCCCCEEEEe
Confidence 45677899999888899999998754 5654
No 121
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=22.05 E-value=6.1e+02 Score=25.45 Aligned_cols=64 Identities=16% Similarity=0.209 Sum_probs=35.6
Q ss_pred ceEEE---CCEEEEEec-CCcEEEEEcCCCeEeeE-eCCCCCCCCccEEEecCeEEEEeeeCCCceEEEE
Q 015428 261 NGFYM---KGFVYWTSL-SGAILVFDLKDEQYGIL-PLPARSGPYGALTQMHGELCYMLPQIQDGECLIG 325 (407)
Q Consensus 261 ~~v~~---~G~lYwl~~-~~~Il~fD~~~e~~~~i-~lP~~~~~~~~l~~~~G~L~~v~~~~~~~~w~l~ 325 (407)
.++.+ +|.|||.-. ...|.+||+....-..+ ..+.....-..|..-.++|+++.. ....++.+.
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~-~~~~V~~~d 611 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI-INEAIFSAN 611 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECS-TTTCEEEEE
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeC-CCCeEEEEE
Confidence 45565 489999764 56899999976433333 222222212234445667766653 234455543
No 122
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=22.01 E-value=3.9e+02 Score=23.21 Aligned_cols=109 Identities=14% Similarity=0.082 Sum_probs=53.2
Q ss_pred cCceEEEeeecccCCeEEEEEcCcccceeecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEE
Q 015428 157 CNGLVCCQSVFEVGNFFYYICNPVTKEWHVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIY 236 (407)
Q Consensus 157 ~~GLll~~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy 236 (407)
.+|-+++.. .....+.|||..++++..+-.... .......+.+.|. +++-+ .... + -.+.+|
T Consensus 18 ~~~~~l~~~---~~d~~v~i~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~-----~~~l~-~~~~----d---g~i~vw 79 (372)
T 1k8k_C 18 KDRTQIAIC---PNNHEVHIYEKSGNKWVQVHELKE--HNGQVTGVDWAPD-----SNRIV-TCGT----D---RNAYVW 79 (372)
T ss_dssp TTSSEEEEE---CSSSEEEEEEEETTEEEEEEEEEC--CSSCEEEEEEETT-----TTEEE-EEET----T---SCEEEE
T ss_pred CCCCEEEEE---eCCCEEEEEeCCCCcEEeeeeecC--CCCcccEEEEeCC-----CCEEE-EEcC----C---CeEEEE
Confidence 345444443 245678888888885322221111 1223456677765 34332 2221 1 157888
Q ss_pred eCCCCcccccCCCCCCCcccccccceEEE--CC-EEEEEecCCcEEEEEcCCCe
Q 015428 237 SSRSRSWRTTDTICSEPDVLKLSINGFYM--KG-FVYWTSLSGAILVFDLKDEQ 287 (407)
Q Consensus 237 ~s~t~~W~~~~~~~~~~~~~~~~~~~v~~--~G-~lYwl~~~~~Il~fD~~~e~ 287 (407)
+..++.+.......... ....++.+ +| .+..-+.++.|..+|+.+..
T Consensus 80 d~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRIN----RAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp EEETTEEEEEEECCCCS----SCEEEEEECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred ECCCCeeeeeEEeecCC----CceeEEEECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 88887765432111000 01122222 34 33333456788888887654
No 123
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=21.82 E-value=4.2e+02 Score=23.45 Aligned_cols=59 Identities=17% Similarity=0.085 Sum_probs=32.2
Q ss_pred CCEEEEEec-CCcEEEEEcCCCeEeeEeCCCCCCCCccEEE--ecCeEEEEeeeCCCceEEEE
Q 015428 266 KGFVYWTSL-SGAILVFDLKDEQYGILPLPARSGPYGALTQ--MHGELCYMLPQIQDGECLIG 325 (407)
Q Consensus 266 ~G~lYwl~~-~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~--~~G~L~~v~~~~~~~~w~l~ 325 (407)
+|.+||.-. .+.|.++|+....-..+.- .....-..++. .+|.|+.........++.+.
T Consensus 90 ~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~ 151 (318)
T 3sov_A 90 GEKLYWTDSETNRIEVSNLDGSLRKVLFW-QELDQPRAIALDPSSGFMYWTDWGEVPKIERAG 151 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEEC-SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEE
T ss_pred CCeEEEEECCCCEEEEEECCCCcEEEEEe-CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEE
Confidence 689999754 5789999998654333321 11111123333 24677666533234455543
No 124
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=21.81 E-value=5.9e+02 Score=25.20 Aligned_cols=130 Identities=12% Similarity=0.000 Sum_probs=62.9
Q ss_pred eEEEEEcCcccce-eecCCCCcCCCCcceEEEEecCCCCCCCCCeEEEEEEeccCCCcceEEEEEEeCCCCcccccCCCC
Q 015428 172 FFYYICNPVTKEW-HVLPQPKFFHGPETAVALVFEPSALGFSAHYEVVCAVPVDQNDVSIIFFEIYSSRSRSWRTTDTIC 250 (407)
Q Consensus 172 ~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~l~~d~~~~~~~~~ykVv~~~~~~~~~~~~~~~~vy~s~t~~W~~~~~~~ 250 (407)
..+...+.-+... ..+|... .....++.||+. .+ +|+..... .-.+..++......+.+-...
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~----~~~~~~l~~d~~----~~--~lywtD~~------~~~I~r~~~~g~~~~~v~~~g 78 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTG----VKEASALDFDVT----DN--RIYWTDIS------LKTISRAFMNGSALEHVVEFG 78 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCS----CSCEEEEEEETT----TT--EEEEEETT------TTEEEEEETTSCSCEEEECSS
T ss_pred CcEEEEECCCCCcceEEEcCC----CCceEEEEEECC----CC--EEEEEECC------CCeEEEEECCCCCcEEEEeCC
Confidence 4455666655543 3344322 123578889875 22 33333211 114555565544443322111
Q ss_pred CCCcccccccceEEE---CCEEEEEec-CCcEEEEEcCCCeEeeEeCCCCCCCCccEEEe--cCeEEEEeeeCCCceEEE
Q 015428 251 SEPDVLKLSINGFYM---KGFVYWTSL-SGAILVFDLKDEQYGILPLPARSGPYGALTQM--HGELCYMLPQIQDGECLI 324 (407)
Q Consensus 251 ~~~~~~~~~~~~v~~---~G~lYwl~~-~~~Il~fD~~~e~~~~i~lP~~~~~~~~l~~~--~G~L~~v~~~~~~~~w~l 324 (407)
. ....++.+ +|.|||.-. .+.|.++|+....-.++-- .....-..|+.- +|.|+.........++..
T Consensus 79 ~------~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~-~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~ 151 (628)
T 4a0p_A 79 L------DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW-KDLDSPRALALDPAEGFMYWTEWGGKPKIDRA 151 (628)
T ss_dssp C------SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC-SSCCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred C------CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe-CCCCCcccEEEccCCCeEEEeCCCCCCEEEEE
Confidence 0 11245555 589999754 5789999997654333321 111111233332 577776553323344443
Done!