BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015429
(407 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1VKC|A Chain A, Putative Acetyl Transferase From Pyrococcus Furiosus
pdb|1VKC|B Chain B, Putative Acetyl Transferase From Pyrococcus Furiosus
Length = 158
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 81 EEKEIVGVIRGCVKTVTTGGSNFVKLAYLLGLRVSPTHRRLGIGTKLVQKLEEWCKQQGA 140
E E++G + C+ T ++VK+AY+ + V R LGIG+ L++K EEW K++GA
Sbjct: 69 ERSELLGHVWICI---TLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERGA 125
Query: 141 EYSYMATECSNEA 153
+ + E N A
Sbjct: 126 KKIVLRVEIDNPA 138
>pdb|4E8O|A Chain A, Crystal Structure Of Aminoglycoside Antibiotic
6'-N-Acetyltransferase Aac(6')-Ih From Acinetobacter
Baumannii
pdb|4E8O|B Chain B, Crystal Structure Of Aminoglycoside Antibiotic
6'-N-Acetyltransferase Aac(6')-Ih From Acinetobacter
Baumannii
Length = 167
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 71 SHIALVAEYGEEKEIVGVIRGCVKTVTTGGSNFVKLAYLLGLRVSPTHRRLGIGTKLVQK 130
+H + Y + ++ + ++ ++ G+ +A+L G+ V P +RR GI T LVQ+
Sbjct: 61 AHRLQLLAYTDTQQAIAMLEASIRYEYVNGTQTSPVAFLEGIFVLPEYRRSGIATGLVQQ 120
Query: 131 LEEWCKQQGAEYSYMATECSNEASIN 156
+E W KQ + TE +++A+++
Sbjct: 121 VEIWAKQ------FACTEFASDAALD 140
>pdb|4EVY|A Chain A, Crystal Structure Of Aminoglycoside Antibiotic
6'-N-Acetyltransferase Aac(6')-Ig From Acinetobacter
Haemolyticus In Complex With Tobramycin
pdb|4EVY|B Chain B, Crystal Structure Of Aminoglycoside Antibiotic
6'-N-Acetyltransferase Aac(6')-Ig From Acinetobacter
Haemolyticus In Complex With Tobramycin
pdb|4F0Y|A Chain A, Crystal Structure Of Aminoglycoside Antibiotic
6'-N-Acetyltransferase Aac(6')-Ig From Acinetobacter
Haemolyticus, Apo
pdb|4F0Y|B Chain B, Crystal Structure Of Aminoglycoside Antibiotic
6'-N-Acetyltransferase Aac(6')-Ig From Acinetobacter
Haemolyticus, Apo
Length = 166
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 82 EKEIVGVIRGCVKTVTTGGSNFVKLAYLLGLRVSPTHRRLGIGTKLVQKLEEWCKQQGAE 141
+ + + ++ ++ G+ + +L G+ V P HRR G+ T L+++ E W KQ
Sbjct: 71 DHQAIAMLEASIRFEYVNGTETSPVGFLEGIYVLPAHRRSGVATMLIRQAEVWAKQ---- 126
Query: 142 YSYMATECSNEASIN 156
+ TE +++A+++
Sbjct: 127 --FSCTEFASDAALD 139
>pdb|3TFY|A Chain A, Naa50p Amino-Terminal Acetyltransferase Bound To Substrate
Peptide Fragment And Coa
pdb|3TFY|B Chain B, Naa50p Amino-Terminal Acetyltransferase Bound To Substrate
Peptide Fragment And Coa
pdb|3TFY|C Chain C, Naa50p Amino-Terminal Acetyltransferase Bound To Substrate
Peptide Fragment And Coa
Length = 169
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 105 KLAYLLGLRVSPTHRRLGIGTKLVQKLEEWCKQQGA-EYSYMATECSNEASINLFTRKCS 163
K Y++ L +RRLGIGTK++ + C++ G + Y+ + SNE++I+ F RK
Sbjct: 70 KRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAID-FYRKFG 128
Query: 164 YTKFRTPTML---VQPVHAH 180
+ T ++P AH
Sbjct: 129 FEIIETKKNYYKRIEPADAH 148
>pdb|2OB0|A Chain A, Human Mak3 Homolog In Complex With Acetyl-Coa
pdb|2OB0|B Chain B, Human Mak3 Homolog In Complex With Acetyl-Coa
pdb|2OB0|C Chain C, Human Mak3 Homolog In Complex With Acetyl-Coa
pdb|2PSW|A Chain A, Human Mak3 Homolog In Complex With Coa
pdb|2PSW|B Chain B, Human Mak3 Homolog In Complex With Coa
pdb|2PSW|C Chain C, Human Mak3 Homolog In Complex With Coa
Length = 170
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 105 KLAYLLGLRVSPTHRRLGIGTKLVQKLEEWCKQQGA-EYSYMATECSNEASINLFTRKCS 163
K Y+ L +RRLGIGTK + + C++ G + Y+ + SNE++I+ F RK
Sbjct: 71 KRLYIXTLGCLAPYRRLGIGTKXLNHVLNICEKDGTFDNIYLHVQISNESAID-FYRKFG 129
Query: 164 YTKFRTPTML---VQPVHAH 180
+ T ++P AH
Sbjct: 130 FEIIETKKNYYKRIEPADAH 149
>pdb|1SVJ|A Chain A, The Solution Structure Of The Nucleotide Binding Domain Of
Kdpb
pdb|1U7Q|A Chain A, The Solution Structure Of The Nucleotide Binding Domain Of
Kdpb
pdb|2A00|A Chain A, The Solution Structure Of The Amp-Pnp Bound Nucleotide
Binding Domain Of Kdpb
pdb|2A29|A Chain A, The Solution Structure Of The Amp-Pnp Bound Nucleotide
Binding Domain Of Kdpb
Length = 156
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 129 QKLEEWCKQQGAEYSYMATECSNEASINLFTRKCSYTKFRTPTMLVQPVHAHYKPVGA-- 186
Q ++E A+ + +A E SI + ++ +F VQ +HA + P A
Sbjct: 31 QGVDEKTLADAAQLASLADETPEGRSIVILAKQ----RFNLRERDVQSLHATFVPFTAQS 86
Query: 187 ---GISI-VRLPRK-SAETVYRRVFANSEFFPKDID 217
GI+I R+ RK S + + R V AN FP D+D
Sbjct: 87 RMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVD 122
>pdb|3PP9|A Chain A, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
pdb|3PP9|B Chain B, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
pdb|3PP9|C Chain C, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
Length = 187
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 102 NFVKLAYLLGLRVSPTHRRLGIGTKLVQKLEEWCKQQGAEYSYMATECSNEASINLFTRK 161
N+ AY+ + V +R LG+G +L+ + ++W K+ + T+ +N A+ F K
Sbjct: 96 NWNNYAYIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNXPGIXLETQNNNVAACK-FYEK 154
Query: 162 CSYT 165
C +
Sbjct: 155 CGFV 158
>pdb|2BL1|A Chain A, Crystal Structure Of A Putative Phosphinothricin
Acetyltransferase (Pa4866) From Pseudomonas Aeruginosa
Pac1
Length = 172
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 22/47 (46%)
Query: 114 VSPTHRRLGIGTKLVQKLEEWCKQQGAEYSYMATECSNEASINLFTR 160
V R G+G +L+Q L E + QG A E N ASI L R
Sbjct: 90 VRDDQRGKGLGVQLLQALIERARAQGLHVXVAAIESGNAASIGLHRR 136
>pdb|1YVO|A Chain A, Hypothetical Acetyltransferase From P.Aeruginosa Pa01
pdb|1YVO|B Chain B, Hypothetical Acetyltransferase From P.Aeruginosa Pa01
Length = 172
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 22/47 (46%)
Query: 114 VSPTHRRLGIGTKLVQKLEEWCKQQGAEYSYMATECSNEASINLFTR 160
V R G+G +L+Q L E + QG A E N ASI L R
Sbjct: 90 VRDDQRGKGLGVQLLQALIERARAQGLHVXVAAIESGNAASIGLHRR 136
>pdb|2J8M|A Chain A, Structure Of P. Aeruginosa Acetyltransferase Pa4866
pdb|2J8M|B Chain B, Structure Of P. Aeruginosa Acetyltransferase Pa4866
pdb|2J8N|A Chain A, Structure Of P. Aeruginosa Acetyltransferase Pa4866 Solved
At Room Temperature
pdb|2J8N|B Chain B, Structure Of P. Aeruginosa Acetyltransferase Pa4866 Solved
At Room Temperature
pdb|2J8R|A Chain A, Structure Of P. Aeruginosa Acetyltransferase Pa4866 Solved
In Complex With L-Methionine Sulfoximine
pdb|2J8R|B Chain B, Structure Of P. Aeruginosa Acetyltransferase Pa4866 Solved
In Complex With L-Methionine Sulfoximine
Length = 172
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 22/47 (46%)
Query: 114 VSPTHRRLGIGTKLVQKLEEWCKQQGAEYSYMATECSNEASINLFTR 160
V R G+G +L+Q L E + QG A E N ASI L R
Sbjct: 90 VRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRR 136
>pdb|2Q0Y|A Chain A, Crystal Structure Of Gcn5-Related N-Acetyltransferase
(Yp_295895.1) From Ralstonia Eutropha Jmp134 At 1.80 A
Resolution
Length = 153
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 105 KLAYLLGLRVSPTHRRLGIGTKLVQKLEEWCKQQGAEYSYM-ATE 148
K Y+L L V P+HR GIG L + E ++G ++ + ATE
Sbjct: 86 KRGYILNLYVDPSHRERGIGQALXNRAEAEFAERGIAFAVLHATE 130
>pdb|3JVN|A Chain A, Crystal Structure Of The Acetyltransferase Vf_1542 From
Vibrio Fischeri, Northeast Structural Genomics
Consortium Target Vfr136
Length = 166
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 59 MGDPVCRVRHFPSHIALVAEYGEEKEIVGVIRGCVKTVTTGGSNFVKLAYLLGLRVSPTH 118
+ DP C V VAE + I+G I G + + S V A + L + +
Sbjct: 51 LDDPECXV--------YVAEXDDV--IIGFITGHFCELISTVSKLVXXATIDELYIEKEY 100
Query: 119 RRLGIGTKLVQKLEEWCKQQGAEYSYMATECSNEASINLFTRK 161
RR G+ +L ++E+ K G + ++ N+ ++ + ++
Sbjct: 101 RREGVAEQLXXRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQ 143
>pdb|2IM5|A Chain A, Crystal Structure Of Nicotinate Phosphoribosyltransferase
From Porphyromonas Gingivalis
pdb|2IM5|B Chain B, Crystal Structure Of Nicotinate Phosphoribosyltransferase
From Porphyromonas Gingivalis
pdb|2IM5|C Chain C, Crystal Structure Of Nicotinate Phosphoribosyltransferase
From Porphyromonas Gingivalis
pdb|2IM5|D Chain D, Crystal Structure Of Nicotinate Phosphoribosyltransferase
From Porphyromonas Gingivalis
Length = 394
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 14/78 (17%)
Query: 82 EKEIVGVIRGCVKTVTTGGSNFVKLAYLLGLRVSPTHRRLGIGTKLVQKLEEWCKQQGAE 141
E + +++ G SN V LA+ GLRVS TH EW + GA
Sbjct: 176 EDRVTDILKQYAGESLFGTSN-VHLAHKHGLRVSGTHP------------HEWIQFHGAI 222
Query: 142 YSY-MATECSNEASINLF 158
Y Y MA + E IN++
Sbjct: 223 YGYKMANYVAMEDWINVY 240
>pdb|2AJ6|A Chain A, Crystal Structure Of A Putative Gnat Family
Acetyltransferase (Mw0638) From Staphylococcus Aureus
Subsp. Aureus At 1.63 A Resolution
Length = 159
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 112 LRVSPTHRRLGIGTKLVQKLEEWCKQQGAE 141
L V P R+LGI T+L LE+W K A+
Sbjct: 96 LYVEPQFRKLGIATQLKIALEKWAKTXNAK 125
>pdb|3DR8|A Chain A, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium With Its Cofactor Acetyl-Coa
pdb|3DR8|B Chain B, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium With Its Cofactor Acetyl-Coa
pdb|3DR6|A Chain A, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium
pdb|3DR6|B Chain B, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium
pdb|3DR6|C Chain C, Structure Of Ynca, A Putative Acetyltransferase From
Salmonella Typhimurium
Length = 174
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 81 EEKEIVG--VIRGCVKTVTTGGSNFVKLAYLLGLR--------VSPTHRRLGIGTKLVQK 130
E ++++G V+ V TG ++F G R V P H+ G+G KL+ +
Sbjct: 47 EARQLLGYPVLVSEENGVVTGYASFGDWRSFDGFRYTVEHSVYVHPAHQGKGLGRKLLSR 106
Query: 131 LEEWCKQQGAEYSYMATECSNEASINL 157
L + ++ G E N ASI L
Sbjct: 107 LIDEARRCGKHVXVAGIESQNAASIRL 133
>pdb|2CNM|A Chain A, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNM|B Chain B, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNM|C Chain C, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNS|A Chain A, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNS|B Chain B, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNS|C Chain C, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNT|A Chain A, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|B Chain B, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|C Chain C, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|D Chain D, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea
Length = 160
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 107 AYLLGLRVSPTHRRLGIGTKLVQKLEEWCKQQGAEYSYMATECSNEASINLF 158
A L + V P +R G+G L++ L + + +G ++ SN A+I L+
Sbjct: 64 ATLFNIAVDPDFQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALY 115
>pdb|2QRW|A Chain A, Crystal Stucture Of Mycobacterium Tuberculosis Trhbo
Wg8f Mutant
pdb|2QRW|B Chain B, Crystal Stucture Of Mycobacterium Tuberculosis Trhbo
Wg8f Mutant
pdb|2QRW|C Chain C, Crystal Stucture Of Mycobacterium Tuberculosis Trhbo
Wg8f Mutant
pdb|2QRW|D Chain D, Crystal Stucture Of Mycobacterium Tuberculosis Trhbo
Wg8f Mutant
pdb|2QRW|E Chain E, Crystal Stucture Of Mycobacterium Tuberculosis Trhbo
Wg8f Mutant
pdb|2QRW|F Chain F, Crystal Stucture Of Mycobacterium Tuberculosis Trhbo
Wg8f Mutant
pdb|2QRW|G Chain G, Crystal Stucture Of Mycobacterium Tuberculosis Trhbo
Wg8f Mutant
pdb|2QRW|H Chain H, Crystal Stucture Of Mycobacterium Tuberculosis Trhbo
Wg8f Mutant
pdb|2QRW|I Chain I, Crystal Stucture Of Mycobacterium Tuberculosis Trhbo
Wg8f Mutant
pdb|2QRW|J Chain J, Crystal Stucture Of Mycobacterium Tuberculosis Trhbo
Wg8f Mutant
pdb|2QRW|K Chain K, Crystal Stucture Of Mycobacterium Tuberculosis Trhbo
Wg8f Mutant
pdb|2QRW|L Chain L, Crystal Stucture Of Mycobacterium Tuberculosis Trhbo
Wg8f Mutant
Length = 128
Score = 28.9 bits (63), Expect = 4.9, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 24 IVREYNEERDKLGVEEIERRCETGQRGKPTLVTDLMGDPVCRVRHFPSHIALV 76
++R E D G EE R G P ++ G P R+RH P I+L+
Sbjct: 31 VLRRVYPEDDLAGAEERLRMFLEQYWGGPRTYSEQRGHPRLRMRHAPFRISLI 83
>pdb|1NGK|A Chain A, Crystallographic Structure Of Mycobacterium Tuberculosis
Hemoglobin O
pdb|1NGK|B Chain B, Crystallographic Structure Of Mycobacterium Tuberculosis
Hemoglobin O
pdb|1NGK|C Chain C, Crystallographic Structure Of Mycobacterium Tuberculosis
Hemoglobin O
pdb|1NGK|D Chain D, Crystallographic Structure Of Mycobacterium Tuberculosis
Hemoglobin O
pdb|1NGK|E Chain E, Crystallographic Structure Of Mycobacterium Tuberculosis
Hemoglobin O
pdb|1NGK|F Chain F, Crystallographic Structure Of Mycobacterium Tuberculosis
Hemoglobin O
pdb|1NGK|G Chain G, Crystallographic Structure Of Mycobacterium Tuberculosis
Hemoglobin O
pdb|1NGK|H Chain H, Crystallographic Structure Of Mycobacterium Tuberculosis
Hemoglobin O
pdb|1NGK|I Chain I, Crystallographic Structure Of Mycobacterium Tuberculosis
Hemoglobin O
pdb|1NGK|J Chain J, Crystallographic Structure Of Mycobacterium Tuberculosis
Hemoglobin O
pdb|1NGK|K Chain K, Crystallographic Structure Of Mycobacterium Tuberculosis
Hemoglobin O
pdb|1NGK|L Chain L, Crystallographic Structure Of Mycobacterium Tuberculosis
Hemoglobin O
Length = 128
Score = 28.9 bits (63), Expect = 5.2, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 24 IVREYNEERDKLGVEEIERRCETGQRGKPTLVTDLMGDPVCRVRHFPSHIALV 76
++R E D G EE R G P ++ G P R+RH P I+L+
Sbjct: 31 VLRRVYPEDDLAGAEERLRMFLEQYWGGPRTYSEQRGHPRLRMRHAPFRISLI 83
>pdb|1S58|A Chain A, The Structure Of B19 Parvovirus Capsid
Length = 554
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 228 TFMAMPKKFVPRWDPKTGILPPSFA 252
TF P+K RW+P+ G+ PP A
Sbjct: 491 TFKLGPRKATGRWNPQPGVYPPHAA 515
>pdb|1U6M|A Chain A, The Crystal Structure Of Acetyltransferase
pdb|1U6M|B Chain B, The Crystal Structure Of Acetyltransferase
pdb|1U6M|C Chain C, The Crystal Structure Of Acetyltransferase
pdb|1U6M|D Chain D, The Crystal Structure Of Acetyltransferase
Length = 199
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 108 YLLGLRVSPTHRRLGIGTKLVQKLEEWCKQQGAEYSYMATECSNEASINLFTRK 161
YL + V R +GIG+KL+ L E K G + + + N + L+ K
Sbjct: 114 YLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASK 167
>pdb|4DSQ|A Chain A, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Oxidized Form
pdb|4DSQ|B Chain B, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Oxidized Form
pdb|4DSQ|C Chain C, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Oxidized Form
pdb|4DSQ|D Chain D, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Oxidized Form
pdb|4DSR|A Chain A, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Reduced Form
pdb|4DSR|B Chain B, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Reduced Form
pdb|4DSR|C Chain C, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Reduced Form
pdb|4DSR|D Chain D, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Reduced Form
Length = 184
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 62 PVCRVRHFPSHIALVAEYGEEKEIVGVIRGCVKTVTTGGSNFVKLAYLLGLRVSPT 117
P C V H P +I + E +EKE+ VI V T + F A+ L V T
Sbjct: 68 PTCTVSHIPGYINYLDELVKEKEVDQVI------VVTVDNPFANQAWAKSLGVKDT 117
>pdb|4H86|A Chain A, Crystal Structure Of Ahp1 From Saccharomyces Cerevisiae In
Reduced Form
Length = 199
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 62 PVCRVRHFPSHIALVAEYGEEKEIVGVIRGCVKTVTTGGSNFVKLAYLLGLRVSPT 117
P C V H P +I + E +EKE+ VI V T + F A+ L V T
Sbjct: 83 PTCTVSHIPGYINYLDELVKEKEVDQVI------VVTVDNPFANQAWAKSLGVKDT 132
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,204,554
Number of Sequences: 62578
Number of extensions: 500381
Number of successful extensions: 1003
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 986
Number of HSP's gapped (non-prelim): 22
length of query: 407
length of database: 14,973,337
effective HSP length: 101
effective length of query: 306
effective length of database: 8,652,959
effective search space: 2647805454
effective search space used: 2647805454
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)