BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015432
(407 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B0BN95|HARB1_RAT Putative nuclease HARBI1 OS=Rattus norvegicus GN=Harbi1 PE=2 SV=1
Length = 349
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 138/297 (46%), Gaps = 27/297 (9%)
Query: 67 TSKNFESVFKISRKTFDYICSLVKEDLAARQSNFSFSNGKPLSPNDMVAIALRRLSSGES 126
T + S++ R+ Y+ L+ L+ R + S + +SP + AL +SG
Sbjct: 31 TDEYLMSMYGFPRQFIYYLVELLGASLS-RPTQRS----RAISPETQILAALGFYTSGSF 85
Query: 127 LQIIGDLFGLNQSTVSQVTWRFVESMEERGLHHLQWPSKETEMEDIKSKFEKIRGFRNCC 186
+GD G++Q+++S+ E++ ER + +P+ E ++ +K +F + G
Sbjct: 86 QTRMGDAIGISQASMSRCVANVTEALVERASQFIHFPADEAAIQSLKDEFYGLAGMPGVI 145
Query: 187 GAIDITHIVMNIPAVDPANNVWYDREKNYSMILQGIVDPEMRFRDIIAGWPGSLTDALVL 246
GA+D H+ + P + + V +R+ +S+ + D + WPGSL D VL
Sbjct: 146 GAVDCIHVAIKAPNAEDLSYV--NRKGLHSLNCLVVCDIRGALMTVETSWPGSLQDCAVL 203
Query: 247 RNSGFFKLTEEGKRLDGKSLQLSEGIELREYIIGDTGFPLLPWLLTPYQGKGLSDIEAEY 306
+ S S Q G+ +++GD+ F L WLLTP + E Y
Sbjct: 204 QQSSL-------------SSQFETGMPKDSWLLGDSSFFLHTWLLTPLHIPE-TPAEYRY 249
Query: 307 NKRHSATRMVAQMALARLKDVWRIIHG----VMWMPDKNRLPRIVLVCCLLHNIVID 359
N+ HSAT V + L L +R + G + + P+K+ I+L CC+LHNI ++
Sbjct: 250 NRAHSATHSVIEKTLRTLCCRFRCLDGSKGALQYSPEKSS--HIILACCVLHNISLE 304
>sp|Q17QR8|HARB1_BOVIN Putative nuclease HARBI1 OS=Bos taurus GN=HARBI1 PE=2 SV=1
Length = 349
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 136/297 (45%), Gaps = 27/297 (9%)
Query: 67 TSKNFESVFKISRKTFDYICSLVKEDLAARQSNFSFSNGKPLSPNDMVAIALRRLSSGES 126
T + S++ R+ Y+ L+ L+ R + S + +SP + AL +SG
Sbjct: 31 TDEYLMSMYGFPRQFIYYLVELLGASLS-RPTQRS----RAISPETQILAALGFYTSGSF 85
Query: 127 LQIIGDLFGLNQSTVSQVTWRFVESMEERGLHHLQWPSKETEMEDIKSKFEKIRGFRNCC 186
+GD G++Q+++S+ E++ ER + +P+ E ++ +K +F + G
Sbjct: 86 QTRMGDAIGISQASMSRCVANVTEALVERASQFIHFPADEASVQALKDEFYGLAGIPGVI 145
Query: 187 GAIDITHIVMNIPAVDPANNVWYDREKNYSMILQGIVDPEMRFRDIIAGWPGSLTDALVL 246
G +D H+ + P + + V +R+ +S+ + D + WPGSL D +VL
Sbjct: 146 GVVDCMHVAIKAPNAEDLSYV--NRKGLHSLNCLMVCDIRGALMTVETSWPGSLQDCVVL 203
Query: 247 RNSGFFKLTEEGKRLDGKSLQLSEGIELREYIIGDTGFPLLPWLLTPYQGKGLSDIEAEY 306
+ S S Q G+ +++GD+ F L WL+TP + E Y
Sbjct: 204 QQSSL-------------SSQFEAGMHKESWLLGDSSFFLRTWLMTPLHIPE-TPAEYRY 249
Query: 307 NKRHSATRMVAQMALARLKDVWRIIHG----VMWMPDKNRLPRIVLVCCLLHNIVID 359
N HSAT V + L +R + G + + P+K+ I+L CC+LHNI ++
Sbjct: 250 NMAHSATHSVIEKTFRTLCSRFRCLDGSKGALQYSPEKSS--HIILACCVLHNISLE 304
>sp|Q6AZB8|HARB1_DANRE Putative nuclease HARBI1 OS=Danio rerio GN=harbi1 PE=2 SV=1
Length = 349
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 132/290 (45%), Gaps = 26/290 (8%)
Query: 73 SVFKISRKTFDYICSLVKEDLAARQSNFSFSNGKPLSPNDMVAIALRRLSSGESLQIIGD 132
+ F R+ Y+ L+K+ L R + +SP+ + AL +SG +GD
Sbjct: 37 NTFGFPREFIYYLVELLKDSLLRRTQR-----SRAISPDVQILAALGFYTSGSFQSKMGD 91
Query: 133 LFGLNQSTVSQVTWRFVESMEERGLHHLQWPSKETEMEDIKSKFEKIRGFRNCCGAIDIT 192
G++Q+++S+ +++ E+ + + E + K +F +I G N G +D
Sbjct: 92 AIGISQASMSRCVSNVTKALIEKAPEFIGFTRDEATKQQFKDEFYRIAGIPNVTGVVDCA 151
Query: 193 HIVMNIPAVDPANNVWYDREKNYSMILQGIVDPEMRFRDIIAGWPGSLTDALVLRNSGFF 252
HI + P D ++ V +++ +S+ Q + D WPGSLTD V + S
Sbjct: 152 HIAIKAPNADDSSYV--NKKGFHSINCQLVCDARGLLLSAETHWPGSLTDRAVFKQSNVA 209
Query: 253 KLTEEGKRLDGKSLQLSEGIELREYIIGDTGFPLLPWLLTPYQGKGLSDIEAEYNKRHSA 312
KL EE + D EG +++GD +PL WL+TP Q S + YN H+
Sbjct: 210 KLFEEQENDD-------EG-----WLLGDNRYPLKKWLMTPVQSPE-SPADYRYNLAHTT 256
Query: 313 TRMVAQMALARLKDVWRIIHG----VMWMPDKNRLPRIVLVCCLLHNIVI 358
T + ++ +R + G + + P+K I+ CC+LHNI +
Sbjct: 257 THEIVDRTFRAIQTRFRCLDGAKGYLQYSPEK--CSHIIQACCVLHNISL 304
>sp|Q96MB7|HARB1_HUMAN Putative nuclease HARBI1 OS=Homo sapiens GN=HARBI1 PE=1 SV=1
Length = 349
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 27/297 (9%)
Query: 67 TSKNFESVFKISRKTFDYICSLVKEDLAARQSNFSFSNGKPLSPNDMVAIALRRLSSGES 126
T + S++ R+ Y+ L+ +L+ R + S + +SP V AL +SG
Sbjct: 31 TDEYLMSMYGFPRQFIYYLVELLGANLS-RPTQRS----RAISPETQVLAALGFYTSGSF 85
Query: 127 LQIIGDLFGLNQSTVSQVTWRFVESMEERGLHHLQWPSKETEMEDIKSKFEKIRGFRNCC 186
+GD G++Q+++S+ E++ ER +++P+ E ++ +K +F + G
Sbjct: 86 QTRMGDAIGISQASMSRCVANVTEALVERASQFIRFPADEASIQALKDEFYGLAGMPGVM 145
Query: 187 GAIDITHIVMNIPAVDPANNVWYDREKNYSMILQGIVDPEMRFRDIIAGWPGSLTDALVL 246
G +D H+ + P + + V +R+ +S+ + D + WPGSL D VL
Sbjct: 146 GVVDCIHVAIKAPNAEDLSYV--NRKGLHSLNCLMVCDIRGTLMTVETNWPGSLQDCAVL 203
Query: 247 RNSGFFKLTEEGKRLDGKSLQLSEGIELREYIIGDTGFPLLPWLLTPYQGKGLSDIEAEY 306
+ S S Q G+ +++GD+ F L WL+TP + E Y
Sbjct: 204 QQSSL-------------SSQFEAGMHKDSWLLGDSSFFLRTWLMTPLHIPE-TPAEYRY 249
Query: 307 NKRHSATRMVAQMALARLKDVWRIIHG----VMWMPDKNRLPRIVLVCCLLHNIVID 359
N HSAT V + L +R + G + + P+K+ I+L CC+LHNI ++
Sbjct: 250 NMAHSATHSVIEKTFRTLCSRFRCLDGSKGALQYSPEKSS--HIILACCVLHNISLE 304
>sp|Q8BR93|HARB1_MOUSE Putative nuclease HARBI1 OS=Mus musculus GN=Harbi1 PE=2 SV=1
Length = 349
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 27/297 (9%)
Query: 67 TSKNFESVFKISRKTFDYICSLVKEDLAARQSNFSFSNGKPLSPNDMVAIALRRLSSGES 126
T + S++ R+ ++ L+ L+ R + S + +SP + AL +SG
Sbjct: 31 TDEYLMSMYGFPRQFIYFLVELLGASLS-RPTQRS----RAISPETQILAALGFYTSGSF 85
Query: 127 LQIIGDLFGLNQSTVSQVTWRFVESMEERGLHHLQWPSKETEMEDIKSKFEKIRGFRNCC 186
+GD G++Q+++S+ E++ ER + +P E ++ +K +F + G
Sbjct: 86 QTRMGDAIGISQASMSRCVANVTEALVERASQFIHFPVDEAAVQSLKDEFYGLAGMPGVI 145
Query: 187 GAIDITHIVMNIPAVDPANNVWYDREKNYSMILQGIVDPEMRFRDIIAGWPGSLTDALVL 246
G D H+ + P + + V +R+ +S+ + D + WPGSL D VL
Sbjct: 146 GVADCIHVAIKAPNAEDLSYV--NRKGLHSLNCLVVCDIRGALMTVETSWPGSLQDCAVL 203
Query: 247 RNSGFFKLTEEGKRLDGKSLQLSEGIELREYIIGDTGFPLLPWLLTPYQGKGLSDIEAEY 306
+ S + Q G+ +++GD+ F L WLLTP + E Y
Sbjct: 204 QRSSL-------------TSQFETGMPKDSWLLGDSSFFLRSWLLTPLPIPE-TAAEYRY 249
Query: 307 NKRHSATRMVAQMALARLKDVWRIIHG----VMWMPDKNRLPRIVLVCCLLHNIVID 359
N+ HSAT V + L L +R + G + + P+K I+L CC+LHNI +D
Sbjct: 250 NRAHSATHSVIERTLQTLCCRFRCLDGSKGALQYSPEK--CSHIILACCVLHNISLD 304
>sp|Q5U538|HARB1_XENLA Putative nuclease HARBI1 OS=Xenopus laevis GN=harbi1 PE=2 SV=1
Length = 347
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 132/299 (44%), Gaps = 27/299 (9%)
Query: 73 SVFKISRKTFDYICSLVKEDLAARQSNFSFSNGKPLSPNDMVAIALRRLSSGESLQIIGD 132
+ + R DY+ L+ L+ R ++ S + +SP + AL +SG +GD
Sbjct: 37 TTYGFPRPFIDYLVDLLGASLS-RPTHRS----RAISPETQIMAALGFYTSGSFQTRMGD 91
Query: 133 LFGLNQSTVSQVTWRFVESMEERGLHHLQWPSKETEMEDIKSKFEKIRGFRNCCGAIDIT 192
G++Q+++S+ E++ ER + +P E ++ +K +F + G G +D T
Sbjct: 92 TIGISQASMSRCVTNVTEALVERASQFISFPRDERSVQGLKDEFYNLAGVPGVLGVVDCT 151
Query: 193 HIVMNIPAVDPANNVWYDREKNYSMILQGIVDPEMRFRDIIAGWPGSLTDALVLRNSGFF 252
+ NI A + + + + +S+ + D GS+ D VL S
Sbjct: 152 QV--NIKAPNSEDLSYVNSRGLHSLNCLLVCDARGSLLWAETSRLGSMQDNAVLHQSELS 209
Query: 253 KLTEEGKRLDGKSLQLSEGIELREYIIGDTGFPLLPWLLTPYQGKGLSDIEAEYNKRHSA 312
L E G +++ D F L PWL+TP Q S + YN H+A
Sbjct: 210 GLFETKMHKQG-------------WLLADNAFILRPWLMTPVQIPE-SPSDYRYNMAHTA 255
Query: 313 TRMVAQMALARLKDVWRIIHG----VMWMPDKNRLPRIVLVCCLLHNIVIDMEDEMLDE 367
T V + L+ +R + G + + P+K+ +IVL CC+LHNI + + +++ E
Sbjct: 256 THSVMERTQRSLRLRFRCLDGSRATLQYSPEKS--AQIVLACCILHNIALQHDLDIVSE 312
>sp|A1WQF4|NTPA_VEREI Non-canonical purine NTP pyrophosphatase OS=Verminephrobacter
eiseniae (strain EF01-2) GN=Veis_4156 PE=3 SV=1
Length = 199
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 280 GDTGFPLLPWLLTPYQGKGLSDIEAEYNKRHSATRMVAQMALARLKDVW 328
G GF P LL P GK +++ AE HS AQ LA L++ W
Sbjct: 150 GSNGFGFDPVLLLPGLGKTFAELPAEVKNAHSHRGRAAQQMLALLRERW 198
>sp|Q8NKR7|SYL_PYRKO Leucine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=leuS PE=3 SV=2
Length = 967
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 192 THIVMNIPAVDPANNVWY-DREKNYSMILQGIVDPEMRFRDIIAGWPGSLTDALVLRNSG 250
T +VM++PA P +++ D +K ++L+ +DP + +I S + L G
Sbjct: 319 TGVVMSVPAHAPFDHIALEDLKKETEILLKYDIDPRV-VEEI------SYISLISLEGYG 371
Query: 251 FFKLTEEGKRLDGKSLQLSEGIELREYIIGDTGFPLLPWLLTPYQGK------------- 297
F EE +RL KS + E +E I + + + PY GK
Sbjct: 372 EFPAVEEAERLGVKSQKDKEKLEQATKNIYKAEYHKGIFKIEPYAGKPVQEVKELVAKEM 431
Query: 298 ---GLSDIEAEYNKRHSATRMVAQMALARLKDVWRIIHG 333
G+++I E+ + +R Q + + D W I +G
Sbjct: 432 MEKGIAEIMYEFADKPVISRFGNQAVIKIIHDQWFIDYG 470
>sp|P05987|KAPR_DICDI cAMP-dependent protein kinase regulatory subunit OS=Dictyostelium
discoideum GN=pkaR PE=1 SV=1
Length = 327
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 34 GDADADSLVAQPQPLDWWDNFSRRISGPLFGSKTSKNFESVFKISRKTFDYICSLVKEDL 93
GD +V++ P D++ + P + TS + ++ R+ F+ +C + + L
Sbjct: 243 GDHSTSHVVSELHPSDYFGEIALLTDRPRAATVTSIGYTKCVELDRQRFNRLCGPIDQML 302
Query: 94 AARQSNFS-FSNGKPLSPN 111
++ F N P SPN
Sbjct: 303 RRNMETYNQFLNRPPSSPN 321
>sp|Q59986|IGA1_STRSA Immunoglobulin A1 protease OS=Streptococcus sanguis GN=iga PE=1
SV=2
Length = 1854
Score = 33.5 bits (75), Expect = 3.1, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 57 RISGPLFGSKTSKNFESVFKISRKTFDYICSLVKEDLAARQSNFS 101
R +G LFGSK KN+ +++ + + FD + + E+L + N S
Sbjct: 712 RFTGKLFGSKDGKNY-AIYNLKKPLFDTLSAATVENLTLKDVNIS 755
>sp|B1YL94|PPK_EXIS2 Polyphosphate kinase OS=Exiguobacterium sibiricum (strain DSM 17290
/ JCM 13490 / 255-15) GN=ppk PE=3 SV=1
Length = 719
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 298 GLSDIEAEYNKRHSATRMVAQMALARLKDVWRIIHGVMWMPDKNRLPRIVL-VCCLLHNI 356
L D E +Y+K+H R+VA+M KD+ I+ R+ IV VCCL I
Sbjct: 518 SLIDEEIKYHKKHGNGRIVAKMNSLTEKDI--IVKLYQASRAGVRIELIVRGVCCLRPQI 575
Query: 357 --------VIDMEDEMLDELPLSYHHDSGYHQQTCESVDKTASVMRDNLSL 399
V + D L+ + Y H +G C S D MR + +
Sbjct: 576 KGVSENIRVTSVVDRYLEHSRIFYFHHNGDDLIYCSSADWMTRNMRKRIEI 626
>sp|B6YST9|SYL_THEON Leucine--tRNA ligase OS=Thermococcus onnurineus (strain NA1)
GN=leuS PE=3 SV=1
Length = 967
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 192 THIVMNIPAVDPANNVWY-DREKNYSMILQGIVDPEMRFRDIIAGWPGSLTDALVLRNSG 250
T +VM++PA P ++V D +K ++L+ +DP + +I S + L G
Sbjct: 319 TGVVMSVPAHAPFDHVALEDLKKETEILLKYDIDPRV-VEEI------SYISLIKLEGYG 371
Query: 251 FFKLTEEGKRLDGKSLQLSEGIELREYIIGDTGFPLLPWLLTPYQGK------------- 297
F EE ++L KS + E +E I + + + PY GK
Sbjct: 372 EFPAVEEVEKLGVKSQKDEEKLEEATKNIYKAEYHKGVFKIEPYAGKPVQEVKDLIAKEL 431
Query: 298 ---GLSDIEAEYNKRHSATRMVAQMALARLKDVWRIIHG 333
G+++I E+ ++ +R Q + + D W I +G
Sbjct: 432 QEKGIAEIMYEFAEKPVISRFGNQAVIKIIHDQWFIDYG 470
>sp|P23393|T112_STRAL Putative transposase for insertion sequence element IS112
OS=Streptomyces albus G PE=3 SV=1
Length = 256
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 29/130 (22%)
Query: 210 DREKNY--SMILQGIVDPEMRFRDIIAGWP--GSLTDALVLRNSGFFKLTEEGKRLDGKS 265
+R KNY S Q ++D + R ++ G P G+ D SG K GK+
Sbjct: 121 ERSKNYRYSTNHQVVIDADTRL-VVVVGRPLAGNRNDCKAWEESG-------AKAAVGKT 172
Query: 266 LQLSEGIELREYIIGDTGFPLLPWLLTPYQGK----GLSDIEAEYNKRHSATRMVAQMAL 321
L +++G G+P L+ P++ + GL D + E+NK H R +
Sbjct: 173 LTIADG-----------GYPGTG-LVIPHRRERGQAGLPDWKEEHNKSHKQVRARVEHVF 220
Query: 322 ARLKDVWRII 331
AR+K W+I+
Sbjct: 221 ARMK-TWKIL 229
>sp|P33569|BCA_STRVP Bromoperoxidase-catalase OS=Streptomyces venezuelae (strain ATCC
10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 /
PD 04745) GN=bca PE=1 SV=1
Length = 483
Score = 32.3 bits (72), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
Query: 132 DLFGLNQSTVSQVTWRF--------VESMEERGLHHLQWPSKETEMEDIKSKFEKIRGFR 183
D +GL+ + QVTW F M G H QW ++ E+ +K F+ +G +
Sbjct: 163 DFWGLSPESTHQVTWLFGDRGIPASYRHMNGYGSHTYQWNNEAGEVFWVKYHFKTDQGIK 222
Query: 184 NCC 186
N
Sbjct: 223 NLT 225
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,565,337
Number of Sequences: 539616
Number of extensions: 6672303
Number of successful extensions: 20906
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 20871
Number of HSP's gapped (non-prelim): 24
length of query: 407
length of database: 191,569,459
effective HSP length: 120
effective length of query: 287
effective length of database: 126,815,539
effective search space: 36396059693
effective search space used: 36396059693
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)