Query 015434
Match_columns 407
No_of_seqs 260 out of 2070
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 06:16:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015434.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015434hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 4.7E-39 1E-43 313.4 36.9 295 104-398 46-350 (350)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 2.2E-38 4.8E-43 303.8 32.7 297 107-405 2-302 (302)
3 KOG1441 Glucose-6-phosphate/ph 100.0 3.1E-39 6.6E-44 303.4 14.0 297 104-404 14-315 (316)
4 PLN00411 nodulin MtN21 family 100.0 2.9E-28 6.3E-33 236.9 31.3 289 107-404 13-336 (358)
5 KOG1444 Nucleotide-sugar trans 100.0 5.5E-28 1.2E-32 222.4 27.0 293 109-405 14-309 (314)
6 PF08449 UAA: UAA transporter 100.0 1.7E-26 3.7E-31 221.3 31.9 280 116-402 9-303 (303)
7 KOG1443 Predicted integral mem 100.0 7.5E-27 1.6E-31 211.7 25.1 299 98-396 7-315 (349)
8 PRK11272 putative DMT superfam 100.0 7.3E-25 1.6E-29 209.1 33.8 274 112-400 13-289 (292)
9 PRK11689 aromatic amino acid e 99.9 1.5E-24 3.2E-29 207.3 32.6 270 105-399 6-290 (295)
10 KOG1442 GDP-fucose transporter 99.9 5.7E-28 1.2E-32 215.4 6.3 303 97-404 18-335 (347)
11 PRK10532 threonine and homoser 99.9 1.5E-23 3.2E-28 200.1 34.9 277 103-406 12-291 (293)
12 PRK11453 O-acetylserine/cystei 99.9 6.9E-24 1.5E-28 203.0 31.8 281 106-403 7-294 (299)
13 PF06027 DUF914: Eukaryotic pr 99.9 3.2E-24 7E-29 204.5 27.8 270 121-400 27-309 (334)
14 TIGR00950 2A78 Carboxylate/Ami 99.9 1.5E-23 3.3E-28 196.5 28.9 253 122-391 4-259 (260)
15 PRK15430 putative chlorampheni 99.9 3.2E-23 6.9E-28 198.1 30.8 278 100-399 5-288 (296)
16 TIGR03340 phn_DUF6 phosphonate 99.9 1.8E-20 4E-25 177.8 27.6 263 120-393 14-280 (281)
17 KOG1580 UDP-galactose transpor 99.9 3.5E-22 7.5E-27 174.8 13.9 258 133-397 50-314 (337)
18 COG5070 VRG4 Nucleotide-sugar 99.9 2.4E-21 5.3E-26 168.2 18.3 287 110-404 9-304 (309)
19 KOG1581 UDP-galactose transpor 99.9 4.5E-19 9.7E-24 161.5 26.9 292 102-400 9-317 (327)
20 KOG2765 Predicted membrane pro 99.9 5.5E-20 1.2E-24 171.6 20.5 227 169-399 159-393 (416)
21 KOG4510 Permease of the drug/m 99.8 6.4E-22 1.4E-26 176.3 5.5 277 105-398 37-327 (346)
22 COG0697 RhaT Permeases of the 99.8 1.4E-17 3.1E-22 157.9 34.6 262 121-397 21-288 (292)
23 TIGR00688 rarD rarD protein. T 99.8 2.7E-17 5.8E-22 154.0 28.3 244 105-371 4-255 (256)
24 KOG1582 UDP-galactose transpor 99.8 1.3E-17 2.8E-22 149.2 19.1 291 103-400 39-336 (367)
25 COG5006 rhtA Threonine/homoser 99.8 3.7E-16 8.1E-21 138.9 26.9 257 124-403 29-289 (292)
26 PF03151 TPT: Triose-phosphate 99.7 5.3E-17 1.1E-21 139.8 16.3 147 250-396 1-153 (153)
27 TIGR00776 RhaT RhaT L-rhamnose 99.7 4.5E-15 9.8E-20 141.2 28.8 262 107-396 5-288 (290)
28 PF04142 Nuc_sug_transp: Nucle 99.7 2.1E-15 4.5E-20 139.3 21.9 212 166-386 14-243 (244)
29 KOG3912 Predicted integral mem 99.7 2E-15 4.3E-20 135.9 20.6 281 113-396 9-334 (372)
30 KOG1583 UDP-N-acetylglucosamin 99.7 2.5E-16 5.5E-21 141.4 14.6 264 123-398 19-316 (330)
31 COG2962 RarD Predicted permeas 99.7 5.2E-14 1.1E-18 128.6 29.5 280 103-404 7-291 (293)
32 KOG2234 Predicted UDP-galactos 99.7 3.3E-13 7.1E-18 126.8 30.1 274 119-401 27-327 (345)
33 KOG2766 Predicted membrane pro 99.5 3.2E-15 6.9E-20 132.9 2.9 261 120-397 31-300 (336)
34 KOG4314 Predicted carbohydrate 99.4 2.8E-12 6E-17 110.1 8.8 222 168-400 52-280 (290)
35 TIGR00803 nst UDP-galactose tr 99.2 9.4E-11 2E-15 107.4 11.9 194 193-394 2-222 (222)
36 PF00892 EamA: EamA-like trans 99.2 1.6E-10 3.5E-15 95.2 9.6 118 121-240 5-125 (126)
37 COG2510 Predicted membrane pro 99.2 8.5E-10 1.8E-14 88.5 12.5 121 120-241 16-139 (140)
38 PF13536 EmrE: Multidrug resis 99.0 1E-09 2.2E-14 89.4 8.5 104 141-245 2-110 (113)
39 PF06800 Sugar_transport: Suga 99.0 1.8E-07 3.9E-12 86.5 22.2 215 161-393 35-268 (269)
40 PF00892 EamA: EamA-like trans 99.0 6.7E-09 1.5E-13 85.4 11.5 125 259-395 1-125 (126)
41 COG2510 Predicted membrane pro 98.9 9.1E-09 2E-13 82.7 9.4 135 250-395 4-138 (140)
42 TIGR00950 2A78 Carboxylate/Ami 98.7 7.7E-07 1.7E-11 83.2 17.5 117 121-237 142-260 (260)
43 PRK15430 putative chlorampheni 98.7 1.6E-06 3.6E-11 82.9 18.2 140 246-395 5-144 (296)
44 TIGR00688 rarD rarD protein. T 98.6 1.8E-06 3.9E-11 80.8 17.5 140 249-395 2-141 (256)
45 TIGR03340 phn_DUF6 phosphonate 98.5 3.7E-06 8.1E-11 79.8 16.1 132 251-396 3-135 (281)
46 PRK13499 rhamnose-proton sympo 98.5 0.00022 4.7E-09 68.8 26.4 233 164-397 68-342 (345)
47 PRK10532 threonine and homoser 98.4 1.6E-05 3.6E-10 75.8 16.5 118 121-240 162-280 (293)
48 PLN00411 nodulin MtN21 family 98.4 2.3E-05 4.9E-10 76.8 17.3 135 251-396 15-156 (358)
49 PF05653 Mg_trans_NIPA: Magnes 98.3 4.8E-06 1E-10 79.4 11.5 64 178-241 59-122 (300)
50 PRK11272 putative DMT superfam 98.3 1.7E-05 3.7E-10 75.7 15.2 119 122-242 165-286 (292)
51 PRK11689 aromatic amino acid e 98.3 2.3E-05 5E-10 74.9 14.9 117 121-241 170-287 (295)
52 PRK02971 4-amino-4-deoxy-L-ara 98.3 4.3E-05 9.3E-10 63.4 14.4 122 249-399 2-125 (129)
53 PRK15051 4-amino-4-deoxy-L-ara 98.2 2.8E-05 6E-10 62.9 12.0 64 177-240 45-108 (111)
54 PRK11453 O-acetylserine/cystei 98.1 0.00013 2.9E-09 69.8 16.2 121 121-241 157-287 (299)
55 PF03151 TPT: Triose-phosphate 98.1 0.00022 4.8E-09 60.8 15.5 125 116-240 9-152 (153)
56 TIGR00817 tpt Tpt phosphate/ph 98.0 5.8E-05 1.3E-09 72.3 11.6 124 117-241 155-293 (302)
57 PTZ00343 triose or hexose phos 98.0 0.00039 8.5E-09 68.1 17.1 138 247-395 47-185 (350)
58 COG2962 RarD Predicted permeas 97.9 0.00043 9.3E-09 64.1 15.3 141 247-398 5-146 (293)
59 PF13536 EmrE: Multidrug resis 97.9 0.00051 1.1E-08 55.7 13.5 57 342-399 53-109 (113)
60 TIGR00776 RhaT RhaT L-rhamnose 97.8 0.00035 7.6E-09 66.6 12.3 113 121-240 166-287 (290)
61 COG0697 RhaT Permeases of the 97.7 0.0023 5E-08 60.2 16.2 119 121-242 168-288 (292)
62 PRK10452 multidrug efflux syst 97.7 0.0009 1.9E-08 54.6 11.3 71 327-401 37-108 (120)
63 COG4975 GlcU Putative glucose 97.6 2.3E-05 5E-10 70.4 1.9 219 161-397 51-286 (288)
64 PF08449 UAA: UAA transporter 97.6 0.0015 3.3E-08 62.6 14.1 130 261-401 12-141 (303)
65 KOG2922 Uncharacterized conser 97.6 0.00017 3.7E-09 67.5 7.1 66 177-242 72-137 (335)
66 PRK02971 4-amino-4-deoxy-L-ara 97.5 0.00049 1.1E-08 57.1 8.3 71 173-243 51-124 (129)
67 PRK15051 4-amino-4-deoxy-L-ara 97.5 0.0013 2.8E-08 53.2 10.3 54 342-395 55-108 (111)
68 PRK10452 multidrug efflux syst 97.5 0.00099 2.1E-08 54.4 9.0 71 172-242 33-104 (120)
69 COG5006 rhtA Threonine/homoser 97.4 0.0052 1.1E-07 55.8 13.1 118 120-238 161-279 (292)
70 PRK09541 emrE multidrug efflux 97.3 0.0045 9.9E-08 49.8 11.5 57 342-398 48-105 (110)
71 PRK10650 multidrug efflux syst 97.3 0.014 3E-07 46.8 13.6 64 328-395 43-107 (109)
72 PF06800 Sugar_transport: Suga 97.2 0.0081 1.8E-07 55.9 13.3 70 169-238 195-268 (269)
73 PRK09541 emrE multidrug efflux 97.2 0.0027 5.8E-08 51.1 8.9 69 174-242 35-104 (110)
74 PRK10650 multidrug efflux syst 97.2 0.005 1.1E-07 49.4 10.2 68 172-239 38-106 (109)
75 PRK11431 multidrug efflux syst 97.1 0.0055 1.2E-07 48.8 9.4 69 173-241 33-102 (105)
76 PRK13499 rhamnose-proton sympo 97.0 0.013 2.9E-07 56.7 13.4 138 248-397 6-154 (345)
77 PF04142 Nuc_sug_transp: Nucle 97.0 0.0029 6.3E-08 58.6 8.6 74 327-400 20-93 (244)
78 PRK11431 multidrug efflux syst 97.0 0.014 3E-07 46.5 11.0 64 329-396 38-102 (105)
79 PF06027 DUF914: Eukaryotic pr 97.0 0.036 7.8E-07 53.6 15.9 139 100-243 165-307 (334)
80 COG2076 EmrE Membrane transpor 97.0 0.015 3.1E-07 46.1 10.7 55 343-397 49-104 (106)
81 COG2076 EmrE Membrane transpor 97.0 0.0054 1.2E-07 48.5 8.1 70 172-241 33-103 (106)
82 KOG2234 Predicted UDP-galactos 96.8 0.072 1.6E-06 51.0 15.5 140 253-397 19-165 (345)
83 PF04657 DUF606: Protein of un 96.7 0.083 1.8E-06 44.4 14.3 129 251-392 3-137 (138)
84 PF04657 DUF606: Protein of un 96.5 0.12 2.6E-06 43.4 13.5 116 122-238 16-138 (138)
85 PF00893 Multi_Drug_Res: Small 96.3 0.036 7.9E-07 43.1 8.7 57 176-232 36-93 (93)
86 PF05653 Mg_trans_NIPA: Magnes 96.3 0.021 4.5E-07 54.6 8.7 116 247-395 5-121 (300)
87 PF10639 UPF0546: Uncharacteri 96.2 0.021 4.5E-07 46.0 7.2 70 169-239 42-112 (113)
88 TIGR00803 nst UDP-galactose tr 96.1 0.065 1.4E-06 48.8 11.1 66 173-238 156-221 (222)
89 KOG4510 Permease of the drug/m 96.0 0.0054 1.2E-07 56.1 3.2 77 161-237 245-321 (346)
90 PF07857 DUF1632: CEO family ( 95.9 0.025 5.5E-07 52.3 6.9 132 250-401 1-139 (254)
91 COG3238 Uncharacterized protei 95.1 1.6 3.5E-05 37.0 14.6 137 248-396 4-146 (150)
92 PF00893 Multi_Drug_Res: Small 95.0 0.12 2.5E-06 40.3 7.0 46 342-387 47-93 (93)
93 KOG1441 Glucose-6-phosphate/ph 93.5 0.24 5.3E-06 47.4 7.2 136 106-241 162-307 (316)
94 KOG1580 UDP-galactose transpor 93.5 0.21 4.6E-06 45.1 6.2 134 258-402 22-163 (337)
95 KOG1581 UDP-galactose transpor 93.3 0.81 1.8E-05 43.1 10.0 133 106-238 171-310 (327)
96 PF06379 RhaT: L-rhamnose-prot 93.2 1.9 4.2E-05 41.4 12.6 143 248-401 6-158 (344)
97 COG3238 Uncharacterized protei 93.0 2.9 6.2E-05 35.5 12.1 118 121-239 19-144 (150)
98 COG4975 GlcU Putative glucose 90.1 0.21 4.5E-06 45.5 2.3 72 167-238 207-282 (288)
99 PF10639 UPF0546: Uncharacteri 89.9 1.1 2.3E-05 36.2 6.0 52 342-393 59-111 (113)
100 KOG2765 Predicted membrane pro 89.8 0.35 7.7E-06 46.7 3.8 72 328-399 163-234 (416)
101 KOG4314 Predicted carbohydrate 85.9 0.4 8.7E-06 42.2 1.4 56 342-397 71-126 (290)
102 KOG1444 Nucleotide-sugar trans 83.3 11 0.00023 36.0 9.7 125 116-240 166-299 (314)
103 PF08627 CRT-like: CRT-like; 82.5 10 0.00022 31.0 7.9 42 102-143 52-94 (130)
104 COG5070 VRG4 Nucleotide-sugar 82.3 20 0.00044 32.4 10.5 98 137-234 186-289 (309)
105 KOG2922 Uncharacterized conser 78.0 0.74 1.6E-05 43.7 0.2 118 245-394 17-134 (335)
106 PF04342 DUF486: Protein of un 77.6 31 0.00067 27.3 8.9 55 185-239 51-106 (108)
107 KOG1442 GDP-fucose transporter 74.5 1.7 3.6E-05 40.4 1.5 52 342-393 120-171 (347)
108 PF06379 RhaT: L-rhamnose-prot 74.3 88 0.0019 30.4 25.9 232 165-396 69-340 (344)
109 KOG3912 Predicted integral mem 71.3 10 0.00022 35.5 5.7 54 342-395 104-157 (372)
110 PF02694 UPF0060: Uncharacteri 69.7 39 0.00085 26.8 7.8 46 353-398 60-105 (107)
111 KOG4831 Unnamed protein [Funct 68.7 9.3 0.0002 30.1 4.2 70 169-239 53-123 (125)
112 PF04342 DUF486: Protein of un 68.0 59 0.0013 25.8 9.3 29 365-393 77-105 (108)
113 PRK02237 hypothetical protein; 65.9 66 0.0014 25.6 9.8 46 353-398 62-107 (109)
114 KOG1582 UDP-galactose transpor 64.3 58 0.0013 30.6 9.0 78 166-243 257-334 (367)
115 PF02694 UPF0060: Uncharacteri 59.4 15 0.00032 29.1 3.8 39 204-242 66-104 (107)
116 PRK02237 hypothetical protein; 59.3 15 0.00032 29.2 3.7 39 204-242 68-106 (109)
117 KOG1583 UDP-N-acetylglucosamin 58.0 62 0.0013 30.5 8.1 138 103-240 160-313 (330)
118 COG3169 Uncharacterized protei 52.0 38 0.00082 26.4 4.8 30 365-394 84-113 (116)
119 COG1742 Uncharacterized conser 49.4 31 0.00067 27.2 4.1 39 204-242 67-105 (109)
120 KOG2322 N-methyl-D-aspartate r 48.2 85 0.0018 28.7 7.3 8 172-179 114-121 (237)
121 COG2116 FocA Formate/nitrite f 36.0 2.4E+02 0.0053 26.4 8.5 23 376-398 237-259 (265)
122 PF07857 DUF1632: CEO family ( 35.7 3.7E+02 0.008 25.0 12.2 101 135-240 26-133 (254)
123 PF11700 ATG22: Vacuole efflux 33.0 5.5E+02 0.012 26.2 29.0 65 202-272 278-345 (477)
124 COG1742 Uncharacterized conser 31.8 2.6E+02 0.0057 22.1 7.7 45 353-397 61-105 (109)
125 COG3169 Uncharacterized protei 29.7 2.7E+02 0.006 21.8 9.9 32 209-240 83-114 (116)
126 PF06570 DUF1129: Protein of u 28.7 4.2E+02 0.0091 23.5 10.6 9 214-222 194-202 (206)
127 PF06123 CreD: Inner membrane 28.4 6.3E+02 0.014 25.5 10.7 112 96-225 319-430 (430)
128 COG4657 RnfA Predicted NADH:ub 28.2 3.9E+02 0.0085 23.0 8.7 61 212-272 88-155 (193)
129 PRK02935 hypothetical protein; 27.2 2.2E+02 0.0048 22.5 5.6 23 377-399 41-63 (110)
130 PF00909 Ammonium_transp: Ammo 26.3 6.5E+02 0.014 25.0 18.1 84 207-295 236-321 (399)
131 PF05297 Herpes_LMP1: Herpesvi 26.2 22 0.00048 33.3 0.0 44 218-261 74-119 (381)
132 KOG4831 Unnamed protein [Funct 26.1 1.7E+02 0.0036 23.3 4.8 52 342-393 70-122 (125)
133 PF07444 Ycf66_N: Ycf66 protei 25.4 92 0.002 23.6 3.2 26 375-400 4-29 (84)
134 cd01324 cbb3_Oxidase_CcoQ Cyto 23.8 65 0.0014 21.6 1.9 19 384-402 19-37 (48)
135 COG3086 RseC Positive regulato 21.9 2.6E+02 0.0056 23.6 5.4 11 367-377 96-106 (150)
136 PRK11715 inner membrane protei 21.8 8.5E+02 0.018 24.7 10.7 112 96-225 325-436 (436)
137 PRK10447 HflBKC-binding inner 21.7 6.1E+02 0.013 23.0 16.8 20 249-268 160-179 (219)
138 PF08693 SKG6: Transmembrane a 21.1 63 0.0014 20.8 1.3 17 383-399 22-38 (40)
139 PF13937 DUF4212: Domain of un 20.7 3.8E+02 0.0081 20.2 7.6 56 99-154 4-65 (81)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=4.7e-39 Score=313.40 Aligned_cols=295 Identities=37% Similarity=0.652 Sum_probs=254.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhccc-CCCC--CHHHHHHHHHHHHHHH
Q 015434 104 RKIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLY-RPKV--SSTQLAAILPLALVHT 180 (407)
Q Consensus 104 ~~l~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~-~~~~--~~~~~~~~~~~g~l~~ 180 (407)
..+++..+++.||++|+..++.||++++.+++|++++++|++++.+++.+++..+.+ +++. .++.++.+++.|+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999998877666654433 3444 3557899999999998
Q ss_pred HHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccccccHHHHHHHHHHHHH
Q 015434 181 LGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLT 260 (407)
Q Consensus 181 ~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 260 (407)
..+...+.|++++++++++++++++|+|+++++++++|||++++++++++++++|+++...+|.++++.|++++++|+++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 88888889999999999999999999999999999999999999999999999999999988888889999999999999
Q ss_pred HHHHHHHHHHhhhccc---cCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHh---h-cCCchHHHHHHHHHHHHH
Q 015434 261 NQSRNVLSKKVMVNKE---EALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQ---S-AGLNLKEVYVRSLIAAIC 333 (407)
Q Consensus 261 ~a~~~vl~k~~~~~~~---~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~ 333 (407)
+|+|+++.|+.+++++ +++++.++..++.+++.++++|+....|+......... . .......++..++.++++
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~ 285 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVW 285 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHH
Confidence 9999999999986543 25778888888899999999999876765322211100 0 111223344457778999
Q ss_pred HHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhc
Q 015434 334 YHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVK 398 (407)
Q Consensus 334 ~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~ 398 (407)
++++|.+.|.++++++|+++++.+++||++++++|+++|||+++..+++|.+++++|+++|++.|
T Consensus 286 ~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 286 YYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999998763
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=2.2e-38 Score=303.76 Aligned_cols=297 Identities=56% Similarity=0.885 Sum_probs=250.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHH
Q 015434 107 EVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNL-YRPKVSSTQLAAILPLALVHTLGNLF 185 (407)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~g~l~~~~~~~ 185 (407)
+....+++|+++|++.+++||++++++++|.++++.|++++.+++.+.+..+. ++++.++++++.+++.|+++++++.+
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999887766643322 24556789999999999999899999
Q ss_pred HHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccccccHHHHHHHHHHHHHHHHHH
Q 015434 186 TNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRN 265 (407)
Q Consensus 186 ~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~ 265 (407)
.|.+++|+++++++++++++|+|+++++++++|||++++++.+++++++|+++...++.+.+..|++++++++++++++.
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 161 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN 161 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877777777889999999999999999
Q ss_pred HHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhc--CCchHHHHHHHHHH-HHHHHHHHHHHH
Q 015434 266 VLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSA--GLNLKEVYVRSLIA-AICYHAYQQVSY 342 (407)
Q Consensus 266 vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~ 342 (407)
++.||..+ ++++|+.++..|++.++.+.+.|+....|+.+......... ......++...+.. ..++.++|...+
T Consensus 162 v~~k~~~~--~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (302)
T TIGR00817 162 IFSKKAMT--IKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAF 239 (302)
T ss_pred HHHHHhhc--cCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999873 23688999999999999999999987766533222111110 11112233323333 335666777778
Q ss_pred HHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhcccccccc
Q 015434 343 MILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRIKPKAK 405 (407)
Q Consensus 343 ~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~~~~~k 405 (407)
.+++++||+++++.++++|++++++|++++||+++..+++|.++++.|+++|++.|.+|+++|
T Consensus 240 ~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~~~~ 302 (302)
T TIGR00817 240 MLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPKPK 302 (302)
T ss_pred HHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCcCCC
Confidence 899999999999999999999999999999999999999999999999999999887777665
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-39 Score=303.43 Aligned_cols=297 Identities=37% Similarity=0.553 Sum_probs=266.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHHHHhcccCC--CCCHHHHHHHHHHHHHH
Q 015434 104 RKIEVLLLMGLWYFFNIIFNIYNKQVLK--VYRFPVTVTTCQFGVGTVLVLLLWTFNLYRP--KVSSTQLAAILPLALVH 179 (407)
Q Consensus 104 ~~l~~~~~~~~~~~~~~~~~~~~K~~l~--~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~g~l~ 179 (407)
+.+....++..|++++++.++.||++++ +|++|++++..|+.++.+.....+..+...+ ..++..++.++++|+++
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~ 93 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF 93 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence 6677888899999999999999999999 7999999999999999999888888776522 23567899999999999
Q ss_pred HHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccccccHHHHHHHHHHHH
Q 015434 180 TLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNL 259 (407)
Q Consensus 180 ~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~s~~ 259 (407)
+++.++.|.|+.|++++++|++|+++|++++++++++.+|++++..+++++.++.||++...+|.++|+.|++.++++.+
T Consensus 94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~ 173 (316)
T KOG1441|consen 94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNL 173 (316)
T ss_pred HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHH-HHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHHH
Q 015434 260 TNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMI-PVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQ 338 (407)
Q Consensus 260 ~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (407)
..++++++.|++++++++++|+.+++.|+..++.+.++ |+....|+... . .+....++.. .+..++.+ ++++++|
T Consensus 174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~~~~~~~-~~~~~~~s-v~~f~~N 249 (316)
T KOG1441|consen 174 AFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLTAPWFVT-FLILLLNS-VLAFLLN 249 (316)
T ss_pred HHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeeccccchh-hHHHHHHH-HHHHHHH
Confidence 99999999999998777899999999999999999998 88877776554 2 2222233333 33344444 9999999
Q ss_pred HHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhccccccc
Q 015434 339 QVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRIKPKA 404 (407)
Q Consensus 339 ~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~~~~~ 404 (407)
+..|++++++||+|+++.+.+|++++++.++++|+|++++.+.+|+++.++|+++|++.|.+++++
T Consensus 250 ls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~ 315 (316)
T KOG1441|consen 250 LSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG 315 (316)
T ss_pred HHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 999999999999999999999999999999999999999999999999999999999998877654
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.97 E-value=2.9e-28 Score=236.91 Aligned_cols=289 Identities=13% Similarity=0.086 Sum_probs=217.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcc--c-CCCCCHHHHHHHHHHHHHHHHHH
Q 015434 107 EVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNL--Y-RPKVSSTQLAAILPLALVHTLGN 183 (407)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~--~-~~~~~~~~~~~~~~~g~l~~~~~ 183 (407)
+..+.++..-+...+...+.|..++..-.|..+.++|+.++++++.++.+.++ + .++.+++++..+...|++..+.+
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~ 92 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYV 92 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHH
Confidence 33445555566677899999999998877889999999999988876654432 2 23445677788888888876667
Q ss_pred HHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHH------hcCCCCHHHHHHHHHHhhhheeeecc-cc------------
Q 015434 184 LFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMF------LGEFPTLWVVGSLIPIMGGVALASVT-EV------------ 244 (407)
Q Consensus 184 ~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~------l~er~s~~~~~~~~~~~~Gv~l~~~~-~~------------ 244 (407)
.+.+.+++|++++.++++.++.|++++++++++ +|||.+++++++++++++|++++... +.
T Consensus 93 ~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~ 172 (358)
T PLN00411 93 ITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLN 172 (358)
T ss_pred HHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccccc
Confidence 789999999999999999999999999999999 69999999999999999999876531 10
Q ss_pred -----------ccc-HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCh-hHHHHHHHHHHHHHHHHHHHHhcCccchhh
Q 015434 245 -----------SFN-WAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDN-ITLFSIITVMSFILMIPVTLIMEGVTFTPA 311 (407)
Q Consensus 245 -----------~~~-~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~-~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~ 311 (407)
..+ ..|++++++++++||+|++++|+..+ +.++ ....+++..++.+.+.+.....++.+...+
T Consensus 173 ~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~----~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~ 248 (358)
T PLN00411 173 FRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMS----EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW 248 (358)
T ss_pred ccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH----HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccc
Confidence 112 45999999999999999999999874 3333 345566677666666655555543222111
Q ss_pred hHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHH
Q 015434 312 YLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGV 391 (407)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~ 391 (407)
.. ..+.....+...++..++++.+ +++++++.+|.++++..+++|+++++++++++||++++.+++|+++++.|+
T Consensus 249 ~~-~~~~~~~~i~y~~i~t~lay~l----w~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv 323 (358)
T PLN00411 249 II-HFDITLITIVTMAIITSVYYVI----HSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGF 323 (358)
T ss_pred ee-ccchHHHHHHHHHHHHHHHHHH----HHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence 11 0111111111122223333333 368999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccccc
Q 015434 392 FLYSRVKRIKPKA 404 (407)
Q Consensus 392 ~ly~~~~~~~~~~ 404 (407)
++..+.+++|.++
T Consensus 324 ~l~~~~~~~~~~~ 336 (358)
T PLN00411 324 YAVMWGKANEEKD 336 (358)
T ss_pred HHHHhhhhhhhhh
Confidence 9998877766444
No 5
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=5.5e-28 Score=222.37 Aligned_cols=293 Identities=21% Similarity=0.262 Sum_probs=253.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH--HHHHHHHHHHHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHH
Q 015434 109 LLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVT--TCQFGVGTVLVLLLWTFNLY-RPKVSSTQLAAILPLALVHTLGNLF 185 (407)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~--~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~g~l~~~~~~~ 185 (407)
....+.|+.+++.++++||++++.+++|..+. ..|.+.+.+.+......+.. .++++++..|+++|..+++.++.+.
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t 93 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFT 93 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHH
Confidence 55677788889999999999999999985555 59999998888877776655 6678999999999999999999999
Q ss_pred HHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccccccHHHHHHHHHHHHHHHHHH
Q 015434 186 TNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRN 265 (407)
Q Consensus 186 ~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~ 265 (407)
...+++|++++.++++|..+|+++++.+..++|.|++...+.++..+.+|.......|.+++..|..|++...++.+.+.
T Consensus 94 ~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~ 173 (314)
T KOG1444|consen 94 GSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFV 173 (314)
T ss_pred ccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015434 266 VLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMIL 345 (407)
Q Consensus 266 vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 345 (407)
++.|+-.+ ..+.+.+.+++|.++++...+....+++|+++ .- ......+....++..+.++|++++..++++++|.
T Consensus 174 v~~kk~vd--~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l-~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct 249 (314)
T KOG1444|consen 174 VYVKKSVD--SANLNKFGLVFYNNLLSLPPLLILSFITGELD-AL-SLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCT 249 (314)
T ss_pred HHHHHhhc--cccccceeEEeehhHHHHHHHHHHHHHhcchH-HH-HhhcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998774 35677888899999999998888888888765 11 1111223334667788999999999999999999
Q ss_pred hccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhcccccccc
Q 015434 346 QRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRIKPKAK 405 (407)
Q Consensus 346 ~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~~~~~k 405 (407)
+..|++++++++..+...+.+...+++|++.++..++|+.+.+.|..+|++.+.++++.+
T Consensus 250 ~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~ 309 (314)
T KOG1444|consen 250 RVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP 309 (314)
T ss_pred hhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence 999999999999555555566566666678999999999999999999999886665444
No 6
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.96 E-value=1.7e-26 Score=221.31 Aligned_cols=280 Identities=19% Similarity=0.295 Sum_probs=228.1
Q ss_pred HHHHHHHHHHHHHHHhc-C--CchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 015434 116 YFFNIIFNIYNKQVLKV-Y--RFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTNMSLGK 192 (407)
Q Consensus 116 ~~~~~~~~~~~K~~l~~-~--~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~al~~ 192 (407)
+++.....++++.+.+. . ++|.++++.|+++..+...+.....+ .++.++..++++++.++++.++..+.|.|++|
T Consensus 9 ~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 87 (303)
T PF08449_consen 9 FGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-FPKSRKIPLKKYAILSFLFFLASVLSNAALKY 87 (303)
T ss_pred HHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33334455666666664 3 26999999999999887776554443 23445677889999999999999999999999
Q ss_pred cchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeeccccc----c------cHHHHHHHHHHHHHHH
Q 015434 193 VAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVS----F------NWAGFWSAMASNLTNQ 262 (407)
Q Consensus 193 ~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~~----~------~~~G~~~~l~s~~~~a 262 (407)
++.++.+++|++.|+++++++++++|||++++++++++++++|+++....|.+ . ...|+++.+++.++.|
T Consensus 88 i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a 167 (303)
T PF08449_consen 88 ISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDA 167 (303)
T ss_pred CChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998876521 1 1239999999999999
Q ss_pred HHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHH--hcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHHHHH
Q 015434 263 SRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLI--MEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQV 340 (407)
Q Consensus 263 ~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (407)
...+++||++++ .+.++.++++|.+.++.+...+.... .++......... .....+..++..++++...+..
T Consensus 168 ~~~~~qe~~~~~--~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~----~~p~~~~~l~~~s~~~~~g~~~ 241 (303)
T PF08449_consen 168 FTGVYQEKLFKK--YGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS----AHPSVLLYLLLFSLTGALGQFF 241 (303)
T ss_pred HHHHHHHHHHHH--hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH----HhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999854 56778999999999999988877766 333211111111 1123455566777777777777
Q ss_pred HHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhccccc
Q 015434 341 SYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRIKP 402 (407)
Q Consensus 341 ~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~~~ 402 (407)
.+.++++.||++.++..++++++++++++++||+++++.+|+|+++++.|..+|.+.|+||+
T Consensus 242 i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~ 303 (303)
T PF08449_consen 242 IFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN 303 (303)
T ss_pred HHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence 78899999999999999999999999999999999999999999999999999999887653
No 7
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.96 E-value=7.5e-27 Score=211.72 Aligned_cols=299 Identities=23% Similarity=0.338 Sum_probs=252.4
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhccc-CCC----CC-HHHHHH
Q 015434 98 QTTELSRKIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLY-RPK----VS-STQLAA 171 (407)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~-~~~----~~-~~~~~~ 171 (407)
+++.+.........+..||+++++..+++|+.-.+|++|.+++.+|.++-.++.........+ .++ .+ ++..++
T Consensus 7 ~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~ 86 (349)
T KOG1443|consen 7 DNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRR 86 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHH
Confidence 345555555556666999999999999999999999999999999999988777655443322 222 22 456788
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccccccHHHH
Q 015434 172 ILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGF 251 (407)
Q Consensus 172 ~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~ 251 (407)
..|+|+..+++..+.|++++|++++++++.|+.+++|+.+++.+|.-||+++.-.+.+.++-+|+++.++.+.+++..|+
T Consensus 87 ~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf 166 (349)
T KOG1443|consen 87 LAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGF 166 (349)
T ss_pred hhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccc-cCCChhHHHHHHHHHHHHHHHHHHHHhcCccch--hhhHhhcCCc-hHHHHHHH
Q 015434 252 WSAMASNLTNQSRNVLSKKVMVNKE-EALDNITLFSIITVMSFILMIPVTLIMEGVTFT--PAYLQSAGLN-LKEVYVRS 327 (407)
Q Consensus 252 ~~~l~s~~~~a~~~vl~k~~~~~~~-~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~ 327 (407)
.+.++++++.++++.+.|.++++++ .+-+|+...+.......+.++|..+..|+.... ...+...+.. .......+
T Consensus 167 ~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i 246 (349)
T KOG1443|consen 167 FLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLI 246 (349)
T ss_pred HHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHH
Confidence 9999999999999999999998766 556788888888888888899999999987543 1222222322 22333445
Q ss_pred HHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHH
Q 015434 328 LIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSR 396 (407)
Q Consensus 328 ~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~ 396 (407)
.+.+...++...+.+..+.+++.++.++.+..|.+.+.+++.+..+|.++..+|.|..+++.|+..|..
T Consensus 247 ~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 247 SLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred HHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 556777777777889999999999999999999999999999999999999999999999999999944
No 8
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.95 E-value=7.3e-25 Score=209.07 Aligned_cols=274 Identities=15% Similarity=0.137 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHH-HHHHHHHHhhh
Q 015434 112 MGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVH-TLGNLFTNMSL 190 (407)
Q Consensus 112 ~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~-~~~~~~~~~al 190 (407)
.+.-.+.+....+..|...++.+ |..++++|+.++.+++.+....++.+ ..++++++..+..|.+. ...+.+.+.+.
T Consensus 13 ~~~~~~iWg~~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 90 (292)
T PRK11272 13 LFALYIIWGSTYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP-LPTLRQWLNAALIGLLLLAVGNGMVTVAE 90 (292)
T ss_pred HHHHHHHHhhHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344456678898888666 99999999999988877665544322 23567777777788765 45677888888
Q ss_pred -cCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecc-cccccHHHHHHHHHHHHHHHHHHHHH
Q 015434 191 -GKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT-EVSFNWAGFWSAMASNLTNQSRNVLS 268 (407)
Q Consensus 191 -~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~-~~~~~~~G~~~~l~s~~~~a~~~vl~ 268 (407)
++++++.++++.++.|+++.+++++ +|||++++++++++++++|+.++..+ +.+.+..|++++++++++||.+.+..
T Consensus 91 ~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~ 169 (292)
T PRK11272 91 HQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWS 169 (292)
T ss_pred HccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999986 69999999999999999999887644 33456789999999999999999999
Q ss_pred HHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 015434 269 KKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRV 348 (407)
Q Consensus 269 k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 348 (407)
||..+ + ++.....++..++.+.+.+.....++.... ..+.......++..++.+.+.+.++ ++.+++.
T Consensus 170 ~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~l~i~~s~~~~~l~----~~~~~~~ 237 (292)
T PRK11272 170 SRLPL----P-VGMMAGAAEMLAAGVVLLIASLLSGERLTA---LPTLSGFLALGYLAVFGSIIAISAY----MYLLRNV 237 (292)
T ss_pred HhcCC----C-cchHHHHHHHHHHHHHHHHHHHHcCCcccc---cCCHHHHHHHHHHHHHHHHHHHHHH----HHHHhhc
Confidence 98641 1 234455677788887777776544322110 0000111122233333344444444 6788999
Q ss_pred ChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhccc
Q 015434 349 SPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRI 400 (407)
Q Consensus 349 s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~ 400 (407)
++.+.++...++|+++.+++++++||++++.+++|+++++.|+++.+..+++
T Consensus 238 ~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~ 289 (292)
T PRK11272 238 RPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL 289 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999988776553
No 9
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.95 E-value=1.5e-24 Score=207.26 Aligned_cols=270 Identities=16% Similarity=0.179 Sum_probs=191.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH
Q 015434 105 KIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNL 184 (407)
Q Consensus 105 ~l~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 184 (407)
.+.....+++|. ......|..+++++ |..++++|+.++.+++.+... +++.++++++..+..++.+...+.
T Consensus 6 ~l~~l~a~~~Wg----~~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~ 76 (295)
T PRK11689 6 TLIGLIAILLWS----TMVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTVG----FPRLRQFPKRYLLAGGLLFVSYEI 76 (295)
T ss_pred hHHHHHHHHHHH----HHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHcc----ccccccccHHHHHHHhHHHHHHHH
Confidence 445556666664 45577899988877 999999999999887765421 122222233344444444556667
Q ss_pred HHHhhhc----CcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccc-----------cccHH
Q 015434 185 FTNMSLG----KVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV-----------SFNWA 249 (407)
Q Consensus 185 ~~~~al~----~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~-----------~~~~~ 249 (407)
+.+.+++ ++++..+.++.++.|+++.+++++++|||++++++.+++++++|++++..++. +.+..
T Consensus 77 ~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~ 156 (295)
T PRK11689 77 CLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPL 156 (295)
T ss_pred HHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChH
Confidence 7777765 46778889999999999999999999999999999999999999988875432 12356
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHH
Q 015434 250 GFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLI 329 (407)
Q Consensus 250 G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (407)
|++++++++++||.++++.||.. ++.++..... ..+.+.+.+.....+++... .. ...+..+.+..+.
T Consensus 157 G~~~~l~aa~~~A~~~v~~k~~~----~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~---~~--~~~~~~l~~~~~~ 224 (295)
T PRK11689 157 SYGLAFIGAFIWAAYCNVTRKYA----RGKNGITLFF---ILTALALWIKYFLSPQPAMV---FS--LPAIIKLLLAAAA 224 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc----CCCCchhHHH---HHHHHHHHHHHHHhcCcccc---CC--HHHHHHHHHHHHH
Confidence 99999999999999999999975 3455554322 22333333333332221110 00 0011122222233
Q ss_pred HHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhcc
Q 015434 330 AAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKR 399 (407)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~ 399 (407)
+++++.++ ++.+++.+|.+.++..+++|+++++++++++||+++..+++|+++++.|+++.....+
T Consensus 225 t~~~~~l~----~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~ 290 (295)
T PRK11689 225 MGFGYAAW----NVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR 290 (295)
T ss_pred HHHHHHHH----HHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence 34444444 7889999999999999999999999999999999999999999999999977655443
No 10
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=5.7e-28 Score=215.40 Aligned_cols=303 Identities=20% Similarity=0.265 Sum_probs=256.8
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCchHHHHHHHHHHHHHHHHHHHHh-ccc-------CCCC
Q 015434 97 HQTTELSRKIEVLLLMGLWYFFNIIFNIYNKQVLKV----YRFPVTVTTCQFGVGTVLVLLLWTF-NLY-------RPKV 164 (407)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~K~~l~~----~~~P~~l~~~r~~~~~~~l~~~~~~-~~~-------~~~~ 164 (407)
|++.-.++..+....+..++.+++++.+.||++++. .+.|.+++++|+++...++...-.. .+. ..++
T Consensus 18 e~~~l~~n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~l 97 (347)
T KOG1442|consen 18 EMPVLEANAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQL 97 (347)
T ss_pred hhHHHHHhhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccc
Confidence 444555566777788888899999999999999996 5789999999999988777654322 111 1235
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeeccc-
Q 015434 165 SSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE- 243 (407)
Q Consensus 165 ~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~- 243 (407)
+-+..++++++++.+.+++.+.|.+++|++++++++-++++.+|+++++++++|||-+..-..++.++++|-.+-+..|
T Consensus 98 dl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~ 177 (347)
T KOG1442|consen 98 DLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEG 177 (347)
T ss_pred cHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecccccc
Confidence 6678899999999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred --ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchH
Q 015434 244 --VSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLK 321 (407)
Q Consensus 244 --~~~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~ 321 (407)
.+..+.|.++++.+.++-|+..++.||..... +-.-+.+.+|+++.+.++.+|...+.++.+-. +.-+..+..
T Consensus 178 ~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v--~~~iw~lt~ynnv~a~lLflpll~lnge~~~v---~~~~~l~a~ 252 (347)
T KOG1442|consen 178 STGTLSWIGVIFGVLASLAVALNAIYTKKVLPPV--GDCIWRLTAYNNVNALLLFLPLLILNGEFQAV---VGFPHLPAI 252 (347)
T ss_pred ccCccchhhhHHHHHHHHHHHHHHHhhheecccc--cCeehhhHHHHHHHHHHHHHHHHHHcchHHHH---cCcccchHH
Confidence 56679999999999999999999999876322 22346788999999999999998887764321 111122345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhcccc
Q 015434 322 EVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRIK 401 (407)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~~ 401 (407)
.+|..+.+++++++..|+.+.+.+|.+||+|+.+.++.|....+++++.+++|.-+..-|-|-++++.|..+|++.|+.+
T Consensus 253 ~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~e 332 (347)
T KOG1442|consen 253 KFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHE 332 (347)
T ss_pred HHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHH
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999987765
Q ss_pred ccc
Q 015434 402 PKA 404 (407)
Q Consensus 402 ~~~ 404 (407)
.++
T Consensus 333 m~~ 335 (347)
T KOG1442|consen 333 MRK 335 (347)
T ss_pred HHh
Confidence 433
No 11
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.94 E-value=1.5e-23 Score=200.09 Aligned_cols=277 Identities=15% Similarity=0.160 Sum_probs=204.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHH
Q 015434 103 SRKIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLG 182 (407)
Q Consensus 103 ~~~l~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 182 (407)
+......+.+++|. ......|+.+++.+ |..+.++|++++.+++.+....+ +.+.++++++..+..|++....
T Consensus 12 ~~~~~~~la~~~~~----~~~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~ 84 (293)
T PRK10532 12 LPILLLLIAMASIQ----SGASLAKSLFPLVG-APGVTALRLALGTLILIAIFKPW--RLRFAKEQRLPLLFYGVSLGGM 84 (293)
T ss_pred hHHHHHHHHHHHHH----hhHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHH--hccCCHHHHHHHHHHHHHHHHH
Confidence 34555555555654 34457899998876 88999999999988877654322 2234577788888888888888
Q ss_pred HHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecc--c-ccccHHHHHHHHHHHH
Q 015434 183 NLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT--E-VSFNWAGFWSAMASNL 259 (407)
Q Consensus 183 ~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~--~-~~~~~~G~~~~l~s~~ 259 (407)
+.+.+++++|++++.+.++..+.|+++.+++ +|++... .++.++++|+.++... + .+.+..|+++++++++
T Consensus 85 ~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~ 158 (293)
T PRK10532 85 NYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGA 158 (293)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHH
Confidence 8899999999999999999999999999886 3665544 4566778998876532 2 2345789999999999
Q ss_pred HHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHHHH
Q 015434 260 TNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQ 339 (407)
Q Consensus 260 ~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (407)
+||.|.++.||.. ++.++... .+...++.+.+.|+....++. .. .. .......++..++.+.+.+.++
T Consensus 159 ~~a~~~v~~r~~~----~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~-~~---~~-~~~~~~~l~lgv~~t~~~~~l~-- 226 (293)
T PRK10532 159 CWAIYILSGQRAG----AEHGPATV-AIGSLIAALIFVPIGALQAGE-AL---WH-WSILPLGLAVAILSTALPYSLE-- 226 (293)
T ss_pred HHHHHHHHHHHHh----ccCCchHH-HHHHHHHHHHHHHHHHHccCc-cc---CC-HHHHHHHHHHHHHHHHHHHHHH--
Confidence 9999999999986 34455554 456677777777776543321 10 00 0001112333344444455455
Q ss_pred HHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhccccccccc
Q 015434 340 VSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRIKPKAKT 406 (407)
Q Consensus 340 ~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~~~~~k~ 406 (407)
++.+++.++.++++..+++|+++++++++++||+++..+++|++++++|.+.+.+..++|.|-|+
T Consensus 227 --~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~~~~ 291 (293)
T PRK10532 227 --MIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPKIKE 291 (293)
T ss_pred --HHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 68889999999999999999999999999999999999999999999999999887777665554
No 12
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.94 E-value=6.9e-24 Score=203.03 Aligned_cols=281 Identities=17% Similarity=0.236 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHH-HHHH
Q 015434 106 IEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHT-LGNL 184 (407)
Q Consensus 106 l~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~-~~~~ 184 (407)
+...+...+|. ......|..+++.+ |..++++|+.++++.+.+... + ++.+ ++..+..|++.. ....
T Consensus 7 l~~l~~~~~Wg----~~~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~-~---~~~~---~~~~~~~g~~~~~~~~~ 74 (299)
T PRK11453 7 VLALLVVVVWG----LNFVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA-R---PKVP---LNLLLGYGLTISFGQFA 74 (299)
T ss_pred HHHHHHHHHHh----hhHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc-C---CCCc---hHHHHHHHHHHHHHHHH
Confidence 34444555554 45567798888766 999999999997765544332 1 1222 233444555433 3455
Q ss_pred HHHhhhcC-cchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeeccc---ccccHHHHHHHHHHHHH
Q 015434 185 FTNMSLGK-VAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE---VSFNWAGFWSAMASNLT 260 (407)
Q Consensus 185 ~~~~al~~-~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~---~~~~~~G~~~~l~s~~~ 260 (407)
+.+.+++| ++++.+.++.++.|+++.+++++++|||++++++++++++++|+.++..++ .+.++.|++++++++++
T Consensus 75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~ 154 (299)
T PRK11453 75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFS 154 (299)
T ss_pred HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHH
Confidence 67788888 688999999999999999999999999999999999999999998887542 22346799999999999
Q ss_pred HHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhc--CCchHHHHHHHHHHHHHHHHHH
Q 015434 261 NQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSA--GLNLKEVYVRSLIAAICYHAYQ 338 (407)
Q Consensus 261 ~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 338 (407)
++.+.+++||..++. ...+......+...++.+.........+++......+... ......++..++.+++.+.++
T Consensus 155 ~a~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~- 232 (299)
T PRK11453 155 WACGNIFNKKIMSHS-TRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIW- 232 (299)
T ss_pred HHHHHHHHHHHhccc-CccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHH-
Confidence 999999999975321 2233344445555555544443333334321100000000 111222333334444445444
Q ss_pred HHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhcccccc
Q 015434 339 QVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRIKPK 403 (407)
Q Consensus 339 ~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~~~~ 403 (407)
+..+++.++.+.++...++|+++++++++++||+++..+++|.+++++|+++..+.++.+++
T Consensus 233 ---~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~~~~~ 294 (299)
T PRK11453 233 ---GTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLRWRKA 294 (299)
T ss_pred ---HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchhhhcc
Confidence 67889999999999999999999999999999999999999999999999887766553333
No 13
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.94 E-value=3.2e-24 Score=204.51 Aligned_cols=270 Identities=15% Similarity=0.186 Sum_probs=208.6
Q ss_pred HHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHHHHhcccC---CCCCHHHHHHHHHHHHHHHHHHHHHHhhhcCcchh
Q 015434 121 IFNIYNKQVLKV-YRFPVTVTTCQFGVGTVLVLLLWTFNLYR---PKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVS 196 (407)
Q Consensus 121 ~~~~~~K~~l~~-~~~P~~l~~~r~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s 196 (407)
+.+..+..+-++ .+.|.+-+++.++.-.++.......|... .+..++++++++.++++...++++.+.|++|++++
T Consensus 27 ~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvt 106 (334)
T PF06027_consen 27 GTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVT 106 (334)
T ss_pred hHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHh
Confidence 334444444443 56687777666665544443333333221 12235667778888999999999999999999999
Q ss_pred hHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccc---------cccHHHHHHHHHHHHHHHHHHHH
Q 015434 197 FTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV---------SFNWAGFWSAMASNLTNQSRNVL 267 (407)
Q Consensus 197 ~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~---------~~~~~G~~~~l~s~~~~a~~~vl 267 (407)
.++++.+++.+|+++++++++|+|+++.+++|++++++|++++...|. +....|++++++++++||+++++
T Consensus 107 S~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~ 186 (334)
T PF06027_consen 107 SVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVL 186 (334)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998876652 23478999999999999999999
Q ss_pred HHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015434 268 SKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQR 347 (407)
Q Consensus 268 ~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 347 (407)
.|++. ++.+..+.+++..+++.++..+...+.|..++... .++.. .....+..+++.+......-..++.
T Consensus 187 ~E~~v----~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~-----~w~~~-~~~~~v~~~~~lf~~y~l~p~~l~~ 256 (334)
T PF06027_consen 187 EEKLV----KKAPRVEFLGMLGLFGFIISGIQLAILERSGIESI-----HWTSQ-VIGLLVGYALCLFLFYSLVPIVLRM 256 (334)
T ss_pred HHHhc----ccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhcc-----CCChh-hHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99988 45678888999999999998888777765444321 12222 2223333444444443344567899
Q ss_pred cChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhccc
Q 015434 348 VSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRI 400 (407)
Q Consensus 348 ~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~ 400 (407)
.+|+..++......+.++++++++||+++++..++|.+++++|+++|+..+.+
T Consensus 257 ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~ 309 (334)
T PF06027_consen 257 SSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP 309 (334)
T ss_pred CccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence 99999999999999999999999999999999999999999999999875544
No 14
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.93 E-value=1.5e-23 Score=196.53 Aligned_cols=253 Identities=17% Similarity=0.190 Sum_probs=196.0
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHH-HHHHHHHHHhhhcCcchhhHHH
Q 015434 122 FNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALV-HTLGNLFTNMSLGKVAVSFTHT 200 (407)
Q Consensus 122 ~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l-~~~~~~~~~~al~~~s~s~~~~ 200 (407)
..+..|..+++...|..+++.|++.+.+++.+....+ .++++++..+..|.+ ..+++.+.+.|++|++++.+++
T Consensus 4 ~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~i 78 (260)
T TIGR00950 4 TGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAAL 78 (260)
T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHH
Confidence 4467899888777689999999999888776654433 234555556666654 6778899999999999999999
Q ss_pred HhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeeccc-ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 015434 201 IKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE-VSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEAL 279 (407)
Q Consensus 201 i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~ 279 (407)
+.++.|+++++++.+++|||++++++.+++++++|++++...+ .+.+..|++++++++++++.+.++.|+..++ .+.
T Consensus 79 i~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~--~~~ 156 (260)
T TIGR00950 79 LLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKK--EGP 156 (260)
T ss_pred HHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhc--CCc
Confidence 9999999999999999999999999999999999998876543 3456789999999999999999999998621 222
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchH-HHHHHHHHHHHHHHHHHHHHHHHhhccChhHHhHHHH
Q 015434 280 DNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLK-EVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNC 358 (407)
Q Consensus 280 ~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~ 358 (407)
++.....+.+.++.+.+.|.....++.... . ...+. .++..++.+.+++.++ ++++++.++.+.++...
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~----~~a~~~~~~~~~s~~~~ 226 (260)
T TIGR00950 157 ELLQFTGWVLLLGALLLLPFAWFLGPNPQA----L--SLQWGALLYLGLIGTALAYFLW----NKGLTLVDPSAASILAL 226 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----c--hHHHHHHHHHHHHHHHHHHHHH----HHHHhcCCchHHHHHHH
Confidence 244455567788888888876654432111 0 00111 1222222333444444 78899999999999999
Q ss_pred HHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHH
Q 015434 359 VKRVVVIVSSVMFFRTPVSAINAFGTGIALAGV 391 (407)
Q Consensus 359 l~~v~~iils~~~fge~~s~~~~~G~~lil~G~ 391 (407)
++|+++++++++++||+++..+++|.++++.|+
T Consensus 227 ~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 227 AEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999886
No 15
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.93 E-value=3.2e-23 Score=198.12 Aligned_cols=278 Identities=11% Similarity=0.052 Sum_probs=190.7
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCCC-----CCHHHHHHHHH
Q 015434 100 TELSRKIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPK-----VSSTQLAAILP 174 (407)
Q Consensus 100 ~~~~~~l~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~ 174 (407)
+..++.+...+..++|.. .....|.. .+.+ |..+.++|++++.+++.++...+++.+. .+++.+...+.
T Consensus 5 ~~~~g~~~~l~a~~~wg~----~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGI----APAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAV 78 (296)
T ss_pred hhhhHHHHHHHHHHHHHH----HHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHH
Confidence 344556666666666643 33455765 4455 8999999999998876655443321111 12333333344
Q ss_pred HHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccccccHHHHHHH
Q 015434 175 LALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSA 254 (407)
Q Consensus 175 ~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~ 254 (407)
.++..+.++.++++|+++++++.++++.++.|+++++++++++|||++++++.++++++.|++++...+.+. ..++
T Consensus 79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~ 154 (296)
T PRK15430 79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIA 154 (296)
T ss_pred HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHH
Confidence 455577789999999999999999999999999999999999999999999999999999999876433222 1467
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCC-chHHHHHHHHHHHHH
Q 015434 255 MASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGL-NLKEVYVRSLIAAIC 333 (407)
Q Consensus 255 l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 333 (407)
++++++||.|.++.|+... ++..+......|...++.+...+. .+.. ... ...... .+..++..++.+.++
T Consensus 155 l~aa~~~a~~~i~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~--~~~~~~~~~~~~~~~g~~t~i~ 226 (296)
T PRK15430 155 LGLAFSFAFYGLVRKKIAV--EAQTGMLIETMWLLPVAAIYLFAI---ADSS-TSH--MGQNPMSLNLLLIAAGIVTTVP 226 (296)
T ss_pred HHHHHHHHHHHHHHHhcCC--CCchhHHHHHHHHHHHHHHHHHHH---ccCC-ccc--ccCCcHHHHHHHHHHHHHHHHH
Confidence 8899999999999988642 112233333344444444432221 1111 000 000000 111222223334444
Q ss_pred HHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhcc
Q 015434 334 YHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKR 399 (407)
Q Consensus 334 ~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~ 399 (407)
+.++ +..+++.+|.+.++..+++|+++++++++++||++++.+++|+++++.|+.+......
T Consensus 227 ~~~~----~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~ 288 (296)
T PRK15430 227 LLCF----TAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAI 288 (296)
T ss_pred HHHH----HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444 6889999999999999999999999999999999999999999999988877665443
No 16
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.88 E-value=1.8e-20 Score=177.80 Aligned_cols=263 Identities=13% Similarity=0.088 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhc--cc-CCCCCHHHHHHHHHHHHHHHHHHHHHHhhhcCcchh
Q 015434 120 IIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFN--LY-RPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVS 196 (407)
Q Consensus 120 ~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~--~~-~~~~~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s 196 (407)
...+...|...++.+ + ..++++....+++.+....+ .. .+..+++.+...+..++.......+.+.++++.+++
T Consensus 14 a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 90 (281)
T TIGR03340 14 AGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVG 90 (281)
T ss_pred HHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChh
Confidence 356677886666522 3 24666666665655544432 11 222344455555556666778899999999999999
Q ss_pred hHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccc-cccHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015434 197 FTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV-SFNWAGFWSAMASNLTNQSRNVLSKKVMVNK 275 (407)
Q Consensus 197 ~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~-~~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~ 275 (407)
.++.+.++.|+++.+++++++|||++++++++++++++|++++...+. ..+..|+.++++++++++.|.++.|+..++.
T Consensus 91 ~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~ 170 (281)
T TIGR03340 91 LVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGV 170 (281)
T ss_pred hhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccch
Confidence 999999999999999999999999999999999999999988765432 3456788899999999999999988764211
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHhH
Q 015434 276 EEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSV 355 (407)
Q Consensus 276 ~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv 355 (407)
+...+......+......+.+.+.....++.... ......+...+..++.+++.+.++ ++.+++.++.+.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~s~l~~~l~----~~al~~~~a~~~~~ 242 (281)
T TIGR03340 171 PAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMF----PYARQILPSATLGGLMIGGAYALV----LWAMTRLPVATVVA 242 (281)
T ss_pred hcccccHHHHHHHHHHHHHHHHHHHHHHhccchh----hhHHHHHHHHHHHHHHHHHHHHHH----HHHHhhCCceEEEe
Confidence 1111222222222222211111111111211110 000111222333334444444444 68889999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHH
Q 015434 356 GNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFL 393 (407)
Q Consensus 356 ~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~l 393 (407)
...++|+++++++++++||+++..+++|+++++.|+++
T Consensus 243 ~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 243 LRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred ecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 99999999999999999999999999999999999875
No 17
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.88 E-value=3.5e-22 Score=174.81 Aligned_cols=258 Identities=16% Similarity=0.141 Sum_probs=210.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHH
Q 015434 133 YRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLL 212 (407)
Q Consensus 133 ~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~ll 212 (407)
|.+...+.++|+.+..++.-++...+.+ .+.++.+-+.+..+++-|.+.++..|.|+||++.++..+-+++.|+-++++
T Consensus 50 FTfalaLVf~qC~~N~vfAkvl~~ir~~-~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil 128 (337)
T KOG1580|consen 50 FTFALALVFFQCTANTVFAKVLFLIRKK-TEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL 128 (337)
T ss_pred ehHHHHHHHHHHHHHHHHHHhheeeccc-ccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence 5677888899999999987766555542 334455567788889999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCHHHHHHHHHHhhhheeeecccc-------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHH
Q 015434 213 SAMFLGEFPTLWVVGSLIPIMGGVALASVTEV-------SFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLF 285 (407)
Q Consensus 213 s~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~-------~~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~ 285 (407)
+.++.+++++|+++.++++++.||++..+.+. +....|-++.++|....++....++|+... .+-....++
T Consensus 129 GVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~--yq~~g~~MM 206 (337)
T KOG1580|consen 129 GVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRAS--YQRTGTSMM 206 (337)
T ss_pred ehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHh--hccCchhhH
Confidence 99999999999999999999999999887642 233689999999999999999999998643 344556788
Q ss_pred HHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHH
Q 015434 286 SIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVI 365 (407)
Q Consensus 286 ~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~i 365 (407)
.|+++.+.+.+-...++.++. ++..++.. -...++..+...++++.+.+.+.|..+...+|++.|++.+.+..+++
T Consensus 207 ~~~NlwStL~Lg~g~lfTGEl-weF~yF~~---RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTi 282 (337)
T KOG1580|consen 207 FYTNLWSTLYLGAGLLFTGEL-WEFFYFVQ---RHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTI 282 (337)
T ss_pred HHHHHHHHHHhhhhheehhhH-HHHHHHHH---hccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHH
Confidence 999999998877666665542 22112211 11244555666677777777778999999999999999999999999
Q ss_pred HHHHHHcCCcCchhHHHHHHHHHHHHHHHHHh
Q 015434 366 VSSVMFFRTPVSAINAFGTGIALAGVFLYSRV 397 (407)
Q Consensus 366 ils~~~fge~~s~~~~~G~~lil~G~~ly~~~ 397 (407)
+.++++|+++++..||+|..+++.|...-...
T Consensus 283 l~SVllf~npls~rQwlgtvlVF~aL~~D~~~ 314 (337)
T KOG1580|consen 283 LISVLLFNNPLSGRQWLGTVLVFSALTADVVD 314 (337)
T ss_pred HHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhc
Confidence 99999999999999999999999998765443
No 18
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.88 E-value=2.4e-21 Score=168.22 Aligned_cols=287 Identities=16% Similarity=0.210 Sum_probs=238.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 015434 110 LLMGLWYFFNIIFNIYNKQVLKV--YRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTN 187 (407)
Q Consensus 110 ~~~~~~~~~~~~~~~~~K~~l~~--~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 187 (407)
...+.|++.++.+++.||++++. |+.-+.+.+.|.+++.+.+.++.+.+.. ..+..+.+.+++.+++...+++...
T Consensus 9 ~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~--~fR~t~aK~WfpiSfLLv~MIyt~S 86 (309)
T COG5070 9 TASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLV--EFRLTKAKKWFPISFLLVVMIYTSS 86 (309)
T ss_pred hHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHh--heehhhhhhhcCHHHHHHHHHHhcc
Confidence 45678888999999999999996 6667889999999888877776665543 2235567889999999999999999
Q ss_pred hhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccccc-------cHHHHHHHHHHHHH
Q 015434 188 MSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSF-------NWAGFWSAMASNLT 260 (407)
Q Consensus 188 ~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~~~-------~~~G~~~~l~s~~~ 260 (407)
.++||.+++.+++.+.++.+.++..+..++|.|.+-....+.++++..-+...++|.+. -..|.+|....++.
T Consensus 87 KsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~Ncls 166 (309)
T COG5070 87 KSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLS 166 (309)
T ss_pred cceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHh
Confidence 99999999999999999999999999999999999999999999999998888887521 12599999999999
Q ss_pred HHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHHHHH
Q 015434 261 NQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQV 340 (407)
Q Consensus 261 ~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (407)
.+.+-...|+-.+- .+....+.++|.++++..+++.+.+..|+++-.. .. .+... -.+..+++++++.+...++
T Consensus 167 saafVL~mrkri~l--tNf~d~dtmfYnNllslPiL~~~s~~~edws~~n--~a-nnl~~-d~l~am~ISgl~svgiSy~ 240 (309)
T COG5070 167 SAAFVLIMRKRIKL--TNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGN--LA-NNLSV-DSLMAMFISGLCSVGISYC 240 (309)
T ss_pred HHHHHHHHHHhhcc--cccchhhHHHHhhhHHHHHHHHHHHHhccCCcch--hh-cCCCh-HHHHHHHHHHHHHhhhhhc
Confidence 99997777765421 2223455679999999999999999998875321 11 11111 1245678899999999999
Q ss_pred HHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhccccccc
Q 015434 341 SYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRIKPKA 404 (407)
Q Consensus 341 ~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~~~~~ 404 (407)
+-|+++.++.+++|+++.++.....+.|.++|||+.+...+..+.+-+....+|.+.+.+|+++
T Consensus 241 saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~ 304 (309)
T COG5070 241 SAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQN 304 (309)
T ss_pred cceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999988775433
No 19
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.86 E-value=4.5e-19 Score=161.53 Aligned_cols=292 Identities=15% Similarity=0.168 Sum_probs=231.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--------cCCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHH
Q 015434 102 LSRKIEVLLLMGLWYFFNIIFNIYNKQVLK--------VYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAIL 173 (407)
Q Consensus 102 ~~~~l~~~~~~~~~~~~~~~~~~~~K~~l~--------~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 173 (407)
.++.++++.++...+...+...++.+.+.+ +|.+|.++.+.|-+++.++-..+.-..+. +...++.+..+.
T Consensus 9 ~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~-~~~~~apl~~y~ 87 (327)
T KOG1581|consen 9 ANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKK-ELSGVAPLYKYS 87 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccc-cCCCCCchhHHh
Confidence 344555555555555666666677666655 36789999999999988877554433332 233456788888
Q ss_pred HHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccc---------
Q 015434 174 PLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV--------- 244 (407)
Q Consensus 174 ~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~--------- 244 (407)
..++...+...+.+.||+|++-++..+.|++--+-+++...++.|+|++..+++..+++.+||.+....+.
T Consensus 88 ~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~ 167 (327)
T KOG1581|consen 88 LISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGR 167 (327)
T ss_pred HHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCC
Confidence 88999999999999999999999999999999999999999999999999999999999999988765421
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHH
Q 015434 245 SFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVY 324 (407)
Q Consensus 245 ~~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (407)
++.++|+.++..+.++.++.+..++++.+ +.+++.+.++++.++++++...... +..+..+..-.+... ....+
T Consensus 168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~--~~k~s~~~mM~~vNLf~~i~~~~~l-i~qg~~~~av~F~~~---hp~~~ 241 (327)
T KOG1581|consen 168 ENSPIGILLLFGYLLFDGFTNATQDSLFK--KYKVSSLHMMFGVNLFSAILNGTYL-ILQGHLLPAVSFIKE---HPDVA 241 (327)
T ss_pred CCchHhHHHHHHHHHHHhhHHhHHHHHhc--cCCccHhHHHHHHHHHHHHHHHHhh-hcCCCCchHHHHHHc---ChhHH
Confidence 24589999999999999999999999995 4789999999999999998776653 222221111111111 12344
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhccc
Q 015434 325 VRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRI 400 (407)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~ 400 (407)
..+++.++++...|.+.|..+++.++++....++.+.++++.++.+.||++++..|++|..+++.|+.+-.+.+.+
T Consensus 242 ~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 242 FDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 5566777777777777899999999999999999999999999999999999999999999999999876654444
No 20
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.85 E-value=5.5e-20 Score=171.64 Aligned_cols=227 Identities=19% Similarity=0.205 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccc----
Q 015434 169 LAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV---- 244 (407)
Q Consensus 169 ~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~---- 244 (407)
.+.-+..+.++.+.++++|.||.|++++..+++.+++-+||..++.++..||+++.|.+++++.++|+++++.+|.
T Consensus 159 ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~ 238 (416)
T KOG2765|consen 159 AKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNS 238 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccc
Confidence 3444566667888999999999999999999999999999999999999999999999999999999999998743
Q ss_pred ----cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCch
Q 015434 245 ----SFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNL 320 (407)
Q Consensus 245 ----~~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~ 320 (407)
+....|.++++++++.||+|.++.||...++++++|.-.+.+|..++..+++.|..++.+....+...+....
T Consensus 239 ~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~--- 315 (416)
T KOG2765|consen 239 DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSST--- 315 (416)
T ss_pred cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCc---
Confidence 2237899999999999999999999988776678999889999999999999988777654443333332211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhcc
Q 015434 321 KEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKR 399 (407)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~ 399 (407)
.+...++.+.+..++-.+.+.++.-.++|++..+..++..+++++.++++-|.++++.+++|.+.+++|.+..++..+
T Consensus 316 -q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 316 -QFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred -eeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 111223333444444455668888999999999999999999999999999999999999999999999999887654
No 21
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.85 E-value=6.4e-22 Score=176.30 Aligned_cols=277 Identities=15% Similarity=0.130 Sum_probs=206.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH
Q 015434 105 KIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNL 184 (407)
Q Consensus 105 ~l~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 184 (407)
.+.+.+..+. ++++..+.+..|.+. +.|......|+++-.++..++...++..---++...+.+++.|+....+..
T Consensus 37 ~~gl~l~~vs-~ff~~~~vv~t~~~e---~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvm 112 (346)
T KOG4510|consen 37 NLGLLLLTVS-YFFNSCMVVSTKVLE---NDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVM 112 (346)
T ss_pred ccCceehhhH-HHHhhHHHhhhhhhc---cChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHH
Confidence 3444555555 566666767777664 358888888988877777666554433100122334556778899889999
Q ss_pred HHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeeccc--------------ccccHHH
Q 015434 185 FTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE--------------VSFNWAG 250 (407)
Q Consensus 185 ~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~--------------~~~~~~G 250 (407)
+.++|++|.+.+++.+|..++|+||.+++++++||+++....++..+.+.||+++.... .+.+..|
T Consensus 113 lmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~g 192 (346)
T KOG4510|consen 113 LMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPG 192 (346)
T ss_pred HHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCc
Confidence 99999999999999999999999999999999999999999999999999999987421 1235678
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHH
Q 015434 251 FWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIA 330 (407)
Q Consensus 251 ~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (407)
...++.+++..|.-.++.|++- ++.|.+....|..+++.+..+......+.+++..+..+ + +..+..
T Consensus 193 t~aai~s~lf~asvyIilR~iG----k~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkd-----r----~l~~~l 259 (346)
T KOG4510|consen 193 TVAAISSVLFGASVYIILRYIG----KNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCGKD-----R----WLFVNL 259 (346)
T ss_pred hHHHHHhHhhhhhHHHHHHHhh----ccccEEEEehHHHHHHHHHHHHHHhhccceecCccccc-----e----EEEEEe
Confidence 9999999999998889998875 56667666778888888877776666665554433221 1 122334
Q ss_pred HHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhc
Q 015434 331 AICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVK 398 (407)
Q Consensus 331 ~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~ 398 (407)
|++++..|+.-.+.+++-.|-..++..+...+++.++.+++|||.+++++|.|+++++....+....|
T Consensus 260 GvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 260 GVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred hhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 55555556544455555444445899999999999999999999999999999999999887765544
No 22
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.84 E-value=1.4e-17 Score=157.85 Aligned_cols=262 Identities=19% Similarity=0.222 Sum_probs=181.5
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHH
Q 015434 121 IFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLY-RPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTH 199 (407)
Q Consensus 121 ~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~ 199 (407)
......|...++...+....+.|+..+..+.......+.. ..+..+..+...+..++.......+++.++++++++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (292)
T COG0697 21 LSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVAS 100 (292)
T ss_pred HHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHH
Confidence 4445556666553334666677999887774333333221 111111223444455555677889999999999999999
Q ss_pred HHhhhhHHHHHHHHH-HHhcCCCCHHHHHHHHHHhhhheeeeccccccc---HHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015434 200 TIKATEPFFSVLLSA-MFLGEFPTLWVVGSLIPIMGGVALASVTEVSFN---WAGFWSAMASNLTNQSRNVLSKKVMVNK 275 (407)
Q Consensus 200 ~i~~~~Pvft~lls~-~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~~~~---~~G~~~~l~s~~~~a~~~vl~k~~~~~~ 275 (407)
++.++.|+++.+++. +++|||++++++.++++++.|++++...+...+ ..|+++++.+++++|++.+..|+..
T Consensus 101 ~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~--- 177 (292)
T COG0697 101 LIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS--- 177 (292)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 999999999999997 777999999999999999999999988775443 5899999999999999999999875
Q ss_pred ccCCChhHHHH-HHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHh
Q 015434 276 EEALDNITLFS-IITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHS 354 (407)
Q Consensus 276 ~~~~~~~~l~~-~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~s 354 (407)
+.++..... +..........+. ........ ... .......+..++..++.+.+ .+..+++.++...+
T Consensus 178 --~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~---~~~~~~~~~g~~~~~i~~~~----~~~~~~~~~~~~~~ 245 (292)
T COG0697 178 --RLGPVTLALLLQLLLALLLLLLF--FLSGFGAP-ILS---RAWLLLLYLGVFSTGLAYLL----WYYALRLLGASLVA 245 (292)
T ss_pred --CCChHHHHHHHHHHHHHHHHHHH--Hhcccccc-CCH---HHHHHHHHHHHHHHHHHHHH----HHHHHHhcCchHHH
Confidence 233433334 3333222222222 22211100 000 00111222222222233333 37889999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHh
Q 015434 355 VGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRV 397 (407)
Q Consensus 355 v~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~ 397 (407)
....++++.+++++++++||+++..+++|..+++.|+.+....
T Consensus 246 ~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 246 LLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999988766
No 23
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.81 E-value=2.7e-17 Score=154.00 Aligned_cols=244 Identities=14% Similarity=0.079 Sum_probs=159.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhccc-C------CCCCHH-HHHHHHHHH
Q 015434 105 KIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLY-R------PKVSST-QLAAILPLA 176 (407)
Q Consensus 105 ~l~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~-~------~~~~~~-~~~~~~~~g 176 (407)
.+...+...+|. ....+.|. ..+.+ |..+.++|++++.+++.++...+++ + ++.+++ .+......|
T Consensus 4 ~~~~i~a~~~wg----~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 77 (256)
T TIGR00688 4 IIVSLLASFLFG----YMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCG 77 (256)
T ss_pred HHHHHHHHHHHH----HHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHH
Confidence 344445555554 45567787 44444 8999999999998776654422211 0 111222 234456677
Q ss_pred HHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccccccHHHHHHHHH
Q 015434 177 LVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMA 256 (407)
Q Consensus 177 ~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~ 256 (407)
++...+..+++.|+++++++.++++.++.|+|+++++++++|||++++++++++++++|++++..++.+.. .++++
T Consensus 78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~ 153 (256)
T TIGR00688 78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALV 153 (256)
T ss_pred HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHH
Confidence 77888899999999999999999999999999999999999999999999999999999988754332221 35788
Q ss_pred HHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHH
Q 015434 257 SNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHA 336 (407)
Q Consensus 257 s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (407)
+++++|.|.+..|+..+ + +....... .........+... .+++.... .. +....+..++..++.+++++.+
T Consensus 154 aa~~~a~~~i~~~~~~~---~--~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~-~~-~~~~~~~~l~~~g~~t~i~~~l 224 (256)
T TIGR00688 154 LAFSFTAYGLIRKALKN---T--DLAGFCLE-TLSLMPVAIYYLL-QTDFATVQ-QT-NPFPIWLLLVLAGLITGTPLLA 224 (256)
T ss_pred HHHHHHHHHHHHhhcCC---C--CcchHHHH-HHHHHHHHHHHHH-HhccCccc-cc-CchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999998642 1 22221111 1111111111111 11111000 00 0111222233333334444444
Q ss_pred HHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHH
Q 015434 337 YQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMF 371 (407)
Q Consensus 337 ~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~ 371 (407)
+ ...+++.++.+.++..+++|+++.++++++
T Consensus 225 ~----~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 225 F----VIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred H----HHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 4 688999999999999999999999999864
No 24
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.79 E-value=1.3e-17 Score=149.20 Aligned_cols=291 Identities=13% Similarity=0.149 Sum_probs=229.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhc--C-CchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHH
Q 015434 103 SRKIEVLLLMGLWYFFNIIFNIYNKQVLKV--Y-RFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVH 179 (407)
Q Consensus 103 ~~~l~~~~~~~~~~~~~~~~~~~~K~~l~~--~-~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 179 (407)
.++.+..+++...++.-.......+++++. | ++.|.+++.|+++-..+-++.+. ..+++.....|+.+..++++.
T Consensus 39 pkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~--~~~~k~r~iP~rtY~~la~~t 116 (367)
T KOG1582|consen 39 PKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQ--LIQTKRRVIPWRTYVILAFLT 116 (367)
T ss_pred chhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEE--eecccceecchhHhhhhHhhh
Confidence 345666777777777777778889999886 4 36699999999987555433221 113333445688888889988
Q ss_pred HHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccc----cccHHHHHHHH
Q 015434 180 TLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV----SFNWAGFWSAM 255 (407)
Q Consensus 180 ~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~----~~~~~G~~~~l 255 (407)
.+.+.+.|-++.|.+.+...+.|+|..+-+++.+.++-++|+.+.++.+..+..+|.++....|. ++|..|+.+.-
T Consensus 117 ~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIs 196 (367)
T KOG1582|consen 117 VGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMIS 196 (367)
T ss_pred hhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999988773 56789999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHH
Q 015434 256 ASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYH 335 (407)
Q Consensus 256 ~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (407)
++.++.|.-.-++++.++.. +-+..++++|...+|.+.++......++.. ..+.+. .... ...+...++-++.++
T Consensus 197 gALl~DA~iGNvQEk~m~~~--~~ss~EmvfySy~iG~vflf~~mvlTge~f-~a~~fc-aehp-~~tyGy~~~~s~~gy 271 (367)
T KOG1582|consen 197 GALLADAVIGNVQEKAMKMN--PASSSEMVFYSYGIGFVFLFAPMVLTGELF-SAWTFC-AEHP-VRTYGYAFLFSLAGY 271 (367)
T ss_pred HHHHHHHHhhHHHHHHHhhC--CCCcceEEEeeecccHHHHHHHHHhcccch-hhhHHH-HhCc-HhHHHHHHHHHHHhH
Confidence 99999999988899988543 344567788888899888877766666532 111111 1112 223444555566666
Q ss_pred HHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhccc
Q 015434 336 AYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRI 400 (407)
Q Consensus 336 ~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~ 400 (407)
+.+.+....++..++.++..+.+.+..+++++++++|.+++|....-|..+++.|+++--+.++.
T Consensus 272 lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 272 LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence 66666678899999999999999999999999999999999999999999999999987776643
No 25
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.78 E-value=3.7e-16 Score=138.89 Aligned_cols=257 Identities=16% Similarity=0.179 Sum_probs=196.7
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHhh
Q 015434 124 IYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKA 203 (407)
Q Consensus 124 ~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~ 203 (407)
-+.|.++.... |.-++++|..++++++...+. ..+.+.+++++..++..|+....+|.++|.+++.++.+++..+-+
T Consensus 29 s~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~R--Pwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF 105 (292)
T COG5006 29 SFAKSLFPLVG-AAGVTALRLAIAALILLALFR--PWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEF 105 (292)
T ss_pred HHHHHHccccC-hhhHHHHHHHHHHHHHHHHhh--HHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhh
Confidence 35677765555 788999999999988776543 224467889999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeeccc---ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCC
Q 015434 204 TEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE---VSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALD 280 (407)
Q Consensus 204 ~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~---~~~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~ 280 (407)
+-|+.+.+++. +| .++...+.+.+.|..+..-.+ .+.|..|..+++.+..||++|.+..||.- ...+
T Consensus 106 ~GPL~vA~~~s----Rr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g----~~~~ 175 (292)
T COG5006 106 TGPLAVALLSS----RR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAG----RAEH 175 (292)
T ss_pred ccHHHHHHHhc----cc--hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhc----ccCC
Confidence 99998877753 33 445566667777776654332 46789999999999999999999999876 2344
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHHHH-HHHHHhhccChhHHhHHHHH
Q 015434 281 NITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQ-VSYMILQRVSPVTHSVGNCV 359 (407)
Q Consensus 281 ~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~s~~~~sv~~~l 359 (407)
...-+.+.+.++.++.+|+.....++.+.. ..+....+..+++.-..-+ .....+++.++-++++...+
T Consensus 176 g~~g~a~gm~vAaviv~Pig~~~ag~~l~~----------p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSL 245 (292)
T COG5006 176 GTAGVAVGMLVAALIVLPIGAAQAGPALFS----------PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSL 245 (292)
T ss_pred CchHHHHHHHHHHHHHhhhhhhhcchhhcC----------hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHh
Confidence 556667888899998899876444332211 1222223333333333333 34677999999999999999
Q ss_pred HHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhcccccc
Q 015434 360 KRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRIKPK 403 (407)
Q Consensus 360 ~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~~~~ 403 (407)
+|.++.+.|++++||.+|..||+|++.++.+....+...+|+.+
T Consensus 246 ePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~~ 289 (292)
T COG5006 246 EPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPAV 289 (292)
T ss_pred hHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCCC
Confidence 99999999999999999999999999999998877665555443
No 26
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.75 E-value=5.3e-17 Score=139.78 Aligned_cols=147 Identities=31% Similarity=0.534 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc---ccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhc--CCc-hHHH
Q 015434 250 GFWSAMASNLTNQSRNVLSKKVMVNK---EEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSA--GLN-LKEV 323 (407)
Q Consensus 250 G~~~~l~s~~~~a~~~vl~k~~~~~~---~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~--~~~-~~~~ 323 (407)
|++++++|+++.|+++++.|++++++ +++.+++++++|.++.+.+++.|..++.|+++......... +.. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 78999999999999999999999763 46899999999999999999999999998876433322111 111 3456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHH
Q 015434 324 YVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSR 396 (407)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~ 396 (407)
+..++.+++.++++|++.+++++++||+++++.+.+|.++.+++++++|||+++..+++|+.+.++|+++|+|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 6778889999999999999999999999999999999999999999999999999999999999999999975
No 27
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.73 E-value=4.5e-15 Score=141.23 Aligned_cols=262 Identities=17% Similarity=0.169 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCCCC-CHHHHHHHHHHHHHHHHHHHH
Q 015434 107 EVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKV-SSTQLAAILPLALVHTLGNLF 185 (407)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~g~l~~~~~~~ 185 (407)
...+.+++|.. ..+..|.+. ..+.++.+ |..++.+++..+....+ .++. .++.+..-+..|+++..++.+
T Consensus 5 ~~lia~~~wGs----~g~~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~-~~~~~~~~~~~~g~l~G~~w~ig~~~ 75 (290)
T TIGR00776 5 IALIPALFWGS----FVLINVKIG-GGPYSQTL---GTTFGALILSIAIAIFV-LPEFWALSIFLVGLLSGAFWALGQIN 75 (290)
T ss_pred HHHHHHHHHhh----hHHHHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHh-CCcccccHHHHHHHHHHHHHHhhhhh
Confidence 34444555643 334456554 34433332 56666665544333222 2222 244555566677778889999
Q ss_pred HHhhhcCcchhhHHHHhh-hhHHHHHHHHHHHhcCCCCHHH----HHHHHHHhhhheeeeccccc-------cc-HHHHH
Q 015434 186 TNMSLGKVAVSFTHTIKA-TEPFFSVLLSAMFLGEFPTLWV----VGSLIPIMGGVALASVTEVS-------FN-WAGFW 252 (407)
Q Consensus 186 ~~~al~~~s~s~~~~i~~-~~Pvft~lls~~~l~er~s~~~----~~~~~~~~~Gv~l~~~~~~~-------~~-~~G~~ 252 (407)
++.+.++++++.+..+.+ +.++++.+.+.+++||+.++++ +++++++++|+++....+.+ .+ ..|++
T Consensus 76 ~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~ 155 (290)
T TIGR00776 76 QFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGIL 155 (290)
T ss_pred HHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHH
Confidence 999999999999988888 8888999999999999999999 99999999999998754311 23 68999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCCChhHH---HHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHH
Q 015434 253 SAMASNLTNQSRNVLSKKVMVNKEEALDNITL---FSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLI 329 (407)
Q Consensus 253 ~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l---~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (407)
++++++++|+.|.+..|+. +.|+.+. +++...++.++..+.. ... .+. .. ...+..+. .++.
T Consensus 156 ~~l~sg~~y~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~---~~~-~~--~~~~~~~~-~Gi~ 220 (290)
T TIGR00776 156 LLLMSTIGYLVYVVVAKAF------GVDGLSVLLPQAIGMVIGGIIFNLGH--ILA---KPL-KK--YAILLNIL-PGLM 220 (290)
T ss_pred HHHHHHHHHHHHHHHHHHc------CCCcceehhHHHHHHHHHHHHHHHHH--hcc---cch-HH--HHHHHHHH-HHHH
Confidence 9999999999999999864 2456555 4444444444333322 110 010 00 00111111 1222
Q ss_pred HHHHHHHHHHHHHHHhh-ccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHH----HHHHHHHHHHHHHHH
Q 015434 330 AAICYHAYQQVSYMILQ-RVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINA----FGTGIALAGVFLYSR 396 (407)
Q Consensus 330 ~~~~~~~~~~~~~~~l~-~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~----~G~~lil~G~~ly~~ 396 (407)
.++.+.+| +...+ +.++.+.++...++|+.+++++++++||+.+..++ +|.++++.|+.+...
T Consensus 221 ~~ia~~~y----~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 221 WGIGNFFY----LFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHH----HHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 23333333 56678 99999999999999999999999999999999999 999999999987654
No 28
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.71 E-value=2.1e-15 Score=139.25 Aligned_cols=212 Identities=16% Similarity=0.220 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccc-
Q 015434 166 STQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV- 244 (407)
Q Consensus 166 ~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~- 244 (407)
+++..++..-+++|.+.+.+.+.++++++++++++++.+..++|++++++++|+|.+.+||.++++.+.|++++..++.
T Consensus 14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 4556667777899999999999999999999999999999999999999999999999999999999999999864321
Q ss_pred ----------------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccc
Q 015434 245 ----------------SFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTF 308 (407)
Q Consensus 245 ----------------~~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~ 308 (407)
.....|+++.++++++.++..++.||++++++ .+.+.........|.++.+....+.+..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~ 171 (244)
T PF04142_consen 94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSAI 171 (244)
T ss_pred ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 11258999999999999999999999996543 444444444455665555554433332222
Q ss_pred hh-hhHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHH
Q 015434 309 TP-AYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGI 386 (407)
Q Consensus 309 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~l 386 (407)
.+ ..+ .+++. ..|..++..++.+.+. -..+|+.+...-+....+..+++.++++++||.+++....+|..+
T Consensus 172 ~~~g~f--~G~~~-~~~~~i~~~a~gGllv----a~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~ 243 (244)
T PF04142_consen 172 SESGFF--HGYSW-WVWIVIFLQAIGGLLV----AFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL 243 (244)
T ss_pred ccCCch--hhcch-HHHHHHHHHHHhhHHH----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence 21 122 23333 3455666677777665 467899999999999999999999999999999999999999865
No 29
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.71 E-value=2e-15 Score=135.88 Aligned_cols=281 Identities=15% Similarity=0.144 Sum_probs=209.3
Q ss_pred HHHHHHHHHHHHHHHHHHhc-------CCchHHHHHHHHHHHHHHHHHHHHhccc--CCCC--------C----HHHHHH
Q 015434 113 GLWYFFNIIFNIYNKQVLKV-------YRFPVTVTTCQFGVGTVLVLLLWTFNLY--RPKV--------S----STQLAA 171 (407)
Q Consensus 113 ~~~~~~~~~~~~~~K~~l~~-------~~~P~~l~~~r~~~~~~~l~~~~~~~~~--~~~~--------~----~~~~~~ 171 (407)
++...++...++..||.=+. |++|+.-+..-|+.-.+++.++...+.+ .+.. + .-+-..
T Consensus 9 ~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~l 88 (372)
T KOG3912|consen 9 LIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVL 88 (372)
T ss_pred hhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcce
Confidence 34445666677888987662 7789888877777777777665554433 1111 0 112344
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccc-------
Q 015434 172 ILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV------- 244 (407)
Q Consensus 172 ~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~------- 244 (407)
+++-+++...+..+.+.++.+++++.+|+++....+|+.+++..+++++++.++|+++..++.|++++...|.
T Consensus 89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~ 168 (372)
T KOG3912|consen 89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPY 168 (372)
T ss_pred ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCc
Confidence 5677889999999999999999999999999999999999999999999999999999999999999876642
Q ss_pred ---cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHH----HHHHHhcCcc--------ch
Q 015434 245 ---SFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMI----PVTLIMEGVT--------FT 309 (407)
Q Consensus 245 ---~~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~----p~~~~~~~~~--------~~ 309 (407)
+.-..|+++.+++-+..|.+.++.+|..+ +.+++|.+..+|..++|.+++. |..++..+.. ++
T Consensus 169 ~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~--~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~e 246 (372)
T KOG3912|consen 169 TDYSSIITGDLLIIIAQIIVAIQMVCEEKQLK--KSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLE 246 (372)
T ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHhhhh--hccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchh
Confidence 22368999999999999999999999883 4678999999999999965443 3332221211 11
Q ss_pred hhh--HhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHH
Q 015434 310 PAY--LQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIA 387 (407)
Q Consensus 310 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~li 387 (407)
++. +...+.. ..++.......+.--++|+......+..|+++-.+...++..+.-+++..+..|.+...|+.|.++.
T Consensus 247 D~~~~~~~~~e~-p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliL 325 (372)
T KOG3912|consen 247 DWGDAFAALQES-PSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLIL 325 (372)
T ss_pred hHHHHHHHhcCC-chhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHH
Confidence 110 1111111 1122222222223334566677888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 015434 388 LAGVFLYSR 396 (407)
Q Consensus 388 l~G~~ly~~ 396 (407)
+.|.++|+-
T Consensus 326 i~Gi~lY~~ 334 (372)
T KOG3912|consen 326 IMGIILYNQ 334 (372)
T ss_pred HHHHHHHHH
Confidence 999999974
No 30
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.70 E-value=2.5e-16 Score=141.45 Aligned_cols=264 Identities=14% Similarity=0.207 Sum_probs=200.3
Q ss_pred HHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHhhhcC-cchhh
Q 015434 123 NIYNKQVLKVYRF-PVTVTTCQFGVGTVLVLLLWTFNLY---RPKVSSTQLAAILPLALVHTLGNLFTNMSLGK-VAVSF 197 (407)
Q Consensus 123 ~~~~K~~l~~~~~-P~~l~~~r~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~g~l~~~~~~~~~~al~~-~s~s~ 197 (407)
.+.-+.+.+..|. -..+++.||++.+.--++.. .+. +++. ..+.++..-.++...+.++|+++++ ++.+.
T Consensus 19 vv~lE~L~~~~pgsgNLITFaqFlFia~eGlif~--skf~~~k~ki---plk~Y~i~V~mFF~vnv~NN~al~f~I~~Pl 93 (330)
T KOG1583|consen 19 VVFLELLVRNEPGSGNLITFAQFLFIATEGLIFT--SKFFTVKPKI---PLKDYAITVAMFFIVNVTNNYALKFNIPMPL 93 (330)
T ss_pred HHHHHHHHHhCCCCeeehHHHHHHHHHHhceeee--ccccccCCCC---chhhhheehheeeeeeeeccceeeecccceE
Confidence 3445555555543 37889999998765443322 221 3333 4555556666777889999999998 89999
Q ss_pred HHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeeccc---cc--------------cc--HHHHHHHHHHH
Q 015434 198 THTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE---VS--------------FN--WAGFWSAMASN 258 (407)
Q Consensus 198 ~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~---~~--------------~~--~~G~~~~l~s~ 258 (407)
..+.++-.++-+++++++++|+|++.+|+.+++++.+|+++.+... .. .. ..|+.+..++.
T Consensus 94 HiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al 173 (330)
T KOG1583|consen 94 HIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFAL 173 (330)
T ss_pred EEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986431 10 01 36888888999
Q ss_pred HHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhH----------hhcCCchHHHHHHHH
Q 015434 259 LTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYL----------QSAGLNLKEVYVRSL 328 (407)
Q Consensus 259 ~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 328 (407)
+..|.-.++++...++++ -++-+.++|....+ +|+.++.++. +.+.+. ...+...+..|..++
T Consensus 174 ~~sa~mgiyqE~~Y~kyG--Kh~~EalFytH~Ls----LP~Flf~~~d-iv~~~~~~~~se~~~~p~~g~~vP~~~~yLl 246 (330)
T KOG1583|consen 174 LLSAYMGIYQETTYQKYG--KHWKEALFYTHFLS----LPLFLFMGDD-IVSHWRLAFKSESYLIPLLGFKVPSMWVYLL 246 (330)
T ss_pred HHHHHHHHHHHHHHHHhc--CChHHHHHHHHHhc----cchHHHhcch-HHHHHHHHhcCcceeccccCccccHHHHHHH
Confidence 999999999999887654 35667788888765 4444444332 211110 112233455667777
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhc
Q 015434 329 IAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVK 398 (407)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~ 398 (407)
...+..+.+--..+.+...++++|++++-++++.++.++++++|.++++++.|+|.++++.|.++|....
T Consensus 247 ~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~ 316 (330)
T KOG1583|consen 247 FNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVW 316 (330)
T ss_pred HHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887776677788899999999999999999999999999999999999999999999999997543
No 31
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.70 E-value=5.2e-14 Score=128.63 Aligned_cols=280 Identities=15% Similarity=0.115 Sum_probs=194.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhccc----CC-CCCHHHHHHHHHHHH
Q 015434 103 SRKIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLY----RP-KVSSTQLAAILPLAL 177 (407)
Q Consensus 103 ~~~l~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~----~~-~~~~~~~~~~~~~g~ 177 (407)
++.+....+-++|. ..-++-|.+- ..+ +..+...|.+....++.......++ +. ..+++.+..+...++
T Consensus 7 ~Gil~~l~Ay~lwG----~lp~y~kll~-~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~ 80 (293)
T COG2962 7 KGILLALLAYLLWG----LLPLYFKLLE-PLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL 80 (293)
T ss_pred chhHHHHHHHHHHH----HHHHHHHHHc-cCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH
Confidence 34444444444553 4555666552 223 6788899999887777654332221 11 123445666667777
Q ss_pred HHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccccccHHHHHHHHHH
Q 015434 178 VHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMAS 257 (407)
Q Consensus 178 l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~s 257 (407)
+-..+...+.+|.+.-.+-.+++-....|++.++++.+|+|||+++.|++++++..+||..-.....+..|....+
T Consensus 81 li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l---- 156 (293)
T COG2962 81 LIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL---- 156 (293)
T ss_pred HHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----
Confidence 7778888999999998888899999999999999999999999999999999999999999887777777765544
Q ss_pred HHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHH
Q 015434 258 NLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAY 337 (407)
Q Consensus 258 ~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (407)
++.|+.|..+-|+ -++|+.+-.+.-++.-....+.+.++.++.+. ....+....+..+...+.++++--.++
T Consensus 157 a~sf~~Ygl~RK~------~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~--~~~~~~~~~~~LLv~aG~vTavpL~lf 228 (293)
T COG2962 157 ALSFGLYGLLRKK------LKVDALTGLTLETLLLLPVALIYLLFLADSGQ--FLQQNANSLWLLLVLAGLVTAVPLLLF 228 (293)
T ss_pred HHHHHHHHHHHHh------cCCchHHhHHHHHHHHhHHHHHHHHHHhcCch--hhhcCCchHHHHHHHhhHHHHHHHHHH
Confidence 6788999877555 34555544443333333333333333333221 011112222333334455555555554
Q ss_pred HHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhccccccc
Q 015434 338 QQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRIKPKA 404 (407)
Q Consensus 338 ~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~~~~~ 404 (407)
...-++++-.+.++..+++|.+..+++++++||+++..+....+++..|+.+|....-++.++
T Consensus 229 ----~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~ 291 (293)
T COG2962 229 ----AAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARK 291 (293)
T ss_pred ----HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 355699999999999999999999999999999999999999999999999998776654443
No 32
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.66 E-value=3.3e-13 Score=126.81 Aligned_cols=274 Identities=14% Similarity=0.192 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHhcC--Cc-hHHHHHHHHHHHHHHHHHHHHhc-----cc-CCCC------CHHHHHHHHHHHHHHHHHH
Q 015434 119 NIIFNIYNKQVLKVY--RF-PVTVTTCQFGVGTVLVLLLWTFN-----LY-RPKV------SSTQLAAILPLALVHTLGN 183 (407)
Q Consensus 119 ~~~~~~~~K~~l~~~--~~-P~~l~~~r~~~~~~~l~~~~~~~-----~~-~~~~------~~~~~~~~~~~g~l~~~~~ 183 (407)
+.+..+..|+.-+.. ++ |.+..+.-=++-.+++....+.. .+ ...+ .+++..++..-+++|++.|
T Consensus 27 ~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqN 106 (345)
T KOG2234|consen 27 NTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYALQN 106 (345)
T ss_pred HhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHHhh
Confidence 345666666665543 22 44444444444444443333222 11 1111 2334555666678899998
Q ss_pred HHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeeccc-----------ccccHHHHH
Q 015434 184 LFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE-----------VSFNWAGFW 252 (407)
Q Consensus 184 ~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~-----------~~~~~~G~~ 252 (407)
.+.+.++.+.+++++++...+..+.|+++..+++++|.+++||.++++.++|++++-.+. .+..+.|..
T Consensus 107 nl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~ 186 (345)
T KOG2234|consen 107 NLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLV 186 (345)
T ss_pred hHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHH
Confidence 899999999999999999999999999999999999999999999999999999975211 123478999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccch-hhhHhhcCCchHHHHHHHHHHH
Q 015434 253 SAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFT-PAYLQSAGLNLKEVYVRSLIAA 331 (407)
Q Consensus 253 ~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 331 (407)
..+.++++.++-.++.+|++++. +.+.+...--...+|.++.+...+..++.... ...+ .|++ ...|..++..+
T Consensus 187 avl~~c~~SgfAgvYfEkiLK~s--~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff--~G~s-~~vw~vVl~~a 261 (345)
T KOG2234|consen 187 AVLVACFLSGFAGVYFEKILKGS--NVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFF--YGYS-SIVWLVVLLNA 261 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHHhhccccccccCCcc--cccc-HHHHHHHHHHh
Confidence 99999999999999999999643 34333333333345555444444444332221 1122 2333 35566677777
Q ss_pred HHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhcccc
Q 015434 332 ICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRIK 401 (407)
Q Consensus 332 ~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~~ 401 (407)
+.+.+. -..+++.+-..-.....+..+++.+.++.+||.++|....+|+.+++..+.+|+..+.++
T Consensus 262 ~gGLlv----s~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 262 VGGLLV----SLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred ccchhH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 777776 467799999988888889999999999999999999999999999999999999666543
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.53 E-value=3.2e-15 Score=132.93 Aligned_cols=261 Identities=13% Similarity=0.128 Sum_probs=199.7
Q ss_pred HHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhH
Q 015434 120 IIFNIYNKQVLKV-YRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFT 198 (407)
Q Consensus 120 ~~~~~~~K~~l~~-~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~ 198 (407)
.+..+.+.++-.+ .+.|..=++.....-+++--++..+|. +.-+..|+.++++++...-++++...|.||++..-.
T Consensus 31 t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi 107 (336)
T KOG2766|consen 31 TSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR---KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSI 107 (336)
T ss_pred HcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh---HHHHHHHHHhhheeEEeecccEEEeeehhhcchHHH
Confidence 3455666666666 567877666666655555445555543 333556777899999998899999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccc--------cccHHHHHHHHHHHHHHHHHHHHHHH
Q 015434 199 HTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV--------SFNWAGFWSAMASNLTNQSRNVLSKK 270 (407)
Q Consensus 199 ~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~--------~~~~~G~~~~l~s~~~~a~~~vl~k~ 270 (407)
+++-+-..+.+++++|+|+|.|+.+.++.+++++++|++++...|. +....|+++.++++-+||..|+..+.
T Consensus 108 ~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEf 187 (336)
T KOG2766|consen 108 MLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEF 187 (336)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHH
Confidence 9999999999999999999999999999999999999999887652 23468999999999999999999998
Q ss_pred hhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccCh
Q 015434 271 VMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSP 350 (407)
Q Consensus 271 ~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~ 350 (407)
+. ++.|..+++....++|.++...- ++.+..+...- .+++.. ...+. .+++.++..-..-..++..|+
T Consensus 188 lv----kn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl-----~w~~~i-~~yl~-f~L~MFllYsl~pil~k~~~a 255 (336)
T KOG2766|consen 188 LV----KNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTL-----HWDSAI-FLYLR-FALTMFLLYSLAPILIKTNSA 255 (336)
T ss_pred HH----hcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeE-----eehHHH-HHHHH-HHHHHHHHHHhhHHheecCCc
Confidence 87 77889999999999999987766 44554332211 111111 11112 333333333233467899999
Q ss_pred hHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHh
Q 015434 351 VTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRV 397 (407)
Q Consensus 351 ~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~ 397 (407)
+.+++.......++.++ ..||-+++|...+....+..|.++|.-.
T Consensus 256 T~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r 300 (336)
T KOG2766|consen 256 TMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR 300 (336)
T ss_pred eEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence 99999888899999888 7888889999999999999999999543
No 34
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.36 E-value=2.8e-12 Score=110.14 Aligned_cols=222 Identities=17% Similarity=0.174 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeeccc--cc
Q 015434 168 QLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE--VS 245 (407)
Q Consensus 168 ~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~--~~ 245 (407)
.+++..|.++++.+.++.+..+++.++++.++.+.++.-.|+.+++++.+|+|+...++++.++.+.|++++.+.| ..
T Consensus 52 ~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a 131 (290)
T KOG4314|consen 52 FFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA 131 (290)
T ss_pred eeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence 3456678888999999999999999999999999999999999999999999999999999999999999998766 34
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHH----HHH-HHHHHhcCccchhhhHhhcCCch
Q 015434 246 FNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFI----LMI-PVTLIMEGVTFTPAYLQSAGLNL 320 (407)
Q Consensus 246 ~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l----~l~-p~~~~~~~~~~~~~~~~~~~~~~ 320 (407)
.++.|+.++++++...|+|.++.|+...+.. .. +...+++..|+. ... |+.+.+.+.+-.+.+ . ...|
T Consensus 132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn--~G--daa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsF-A--~~PW 204 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALYKVLFKMFIGNAN--FG--DAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSF-A--AAPW 204 (290)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhccCc--ch--hHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHH-h--hCCc
Confidence 5699999999999999999999999885432 21 111223333322 112 222222222111111 1 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhccc
Q 015434 321 KEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRI 400 (407)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~ 400 (407)
.. ++..+.....+|+.....+..+.|...|+...+..+....++.++-+-..+.....|..+++.|..+......+
T Consensus 205 G~----l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~ 280 (290)
T KOG4314|consen 205 GC----LCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDK 280 (290)
T ss_pred hh----hhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence 22 23333333444443345567788999999998989999999988877789999999999999999887655443
No 35
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.22 E-value=9.4e-11 Score=107.35 Aligned_cols=194 Identities=14% Similarity=0.130 Sum_probs=129.7
Q ss_pred cchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecc--------------------cc-------c
Q 015434 193 VAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT--------------------EV-------S 245 (407)
Q Consensus 193 ~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~--------------------~~-------~ 245 (407)
++++.....++..++++++.++.+.++|++..++++.+++..|++..... +. +
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 56778888899999999999999999999999999999988888753211 11 2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHH
Q 015434 246 FNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYV 325 (407)
Q Consensus 246 ~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (407)
..+.|....+.+.++.++..+++++..+++ +.....-.....+++.+...... ...+.+.....-...+.. ...+.
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~--~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~ 157 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDG--DTMFWSRNLQLPLFGLFSTFSVL-LWSDGTLISNFGFFIGYP-TAVWI 157 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCC--CCchHHHHHHHHHHHHHHHHHHH-hhcccchhhccCcccCCc-hHHHH
Confidence 236788888888888899999999876432 22211111112222222111111 111111110000001211 23344
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHH
Q 015434 326 RSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLY 394 (407)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly 394 (407)
.++..++.+.+ ..+++++.++.+.++...++++++.++++++|||+++..+++|+.+++.|+++|
T Consensus 158 ~~~~~a~~~~~----v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 158 VGLLNVGGGLC----IGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHhcCce----eeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 44444444444 368899999999999999999999999999999999999999999999998765
No 36
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.17 E-value=1.6e-10 Score=95.22 Aligned_cols=118 Identities=27% Similarity=0.418 Sum_probs=98.7
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhccc--CCCCCHHHHHHHHHHHHH-HHHHHHHHHhhhcCcchhh
Q 015434 121 IFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLY--RPKVSSTQLAAILPLALV-HTLGNLFTNMSLGKVAVSF 197 (407)
Q Consensus 121 ~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~g~l-~~~~~~~~~~al~~~s~s~ 197 (407)
...+++|...++.+ |...+++|+..+.+ +.+......+ ....+++++...+..+.+ ..+++.+.+.++++++++.
T Consensus 5 ~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 82 (126)
T PF00892_consen 5 IYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASI 82 (126)
T ss_pred eHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhH
Confidence 45678899988866 89999999999987 4443333222 245567777777888877 5788999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeee
Q 015434 198 THTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALAS 240 (407)
Q Consensus 198 ~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~ 240 (407)
++++..+.|+++.+++++++||+++++++++++++++|++++.
T Consensus 83 ~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 83 VSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998753
No 37
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.15 E-value=8.5e-10 Score=88.53 Aligned_cols=121 Identities=23% Similarity=0.178 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCC---CCCHHHHHHHHHHHHHHHHHHHHHHhhhcCcchh
Q 015434 120 IIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRP---KVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVS 196 (407)
Q Consensus 120 ~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s 196 (407)
....++.|..+++.+ |.+-++.|..+..+++.......++.. ..+++.+..++.-|+..+++..+++.|++.-.++
T Consensus 16 ~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as 94 (140)
T COG2510 16 GLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKAS 94 (140)
T ss_pred HHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcc
Confidence 356688999998777 999999999998888877666554421 2467888888888888899999999999999999
Q ss_pred hHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeec
Q 015434 197 FTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (407)
Q Consensus 197 ~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~ 241 (407)
...-+..++|+++.+++++++|||++..++++++++++|++++..
T Consensus 95 ~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 95 RVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred eEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 999999999999999999999999999999999999999998764
No 38
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.03 E-value=1e-09 Score=89.41 Aligned_cols=104 Identities=15% Similarity=0.204 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHHhcccC----CCCCHHHHHHHHHHHHHHH-HHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHH
Q 015434 141 TCQFGVGTVLVLLLWTFNLYR----PKVSSTQLAAILPLALVHT-LGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAM 215 (407)
Q Consensus 141 ~~r~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~-~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~ 215 (407)
.+|++++.+++......+++. +..+++.+..++..|++.. .++.++++|+++.+ +.+..+.++.|+|+++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 578888877776655544331 1123344556666677765 78999999999999 58889999999999999999
Q ss_pred HhcCCCCHHHHHHHHHHhhhheeeeccccc
Q 015434 216 FLGEFPTLWVVGSLIPIMGGVALASVTEVS 245 (407)
Q Consensus 216 ~l~er~s~~~~~~~~~~~~Gv~l~~~~~~~ 245 (407)
++|||++++++.+++++++|++++..+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999887754
No 39
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.98 E-value=1.8e-07 Score=86.51 Aligned_cols=215 Identities=16% Similarity=0.178 Sum_probs=150.9
Q ss_pred CCCCC--HHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHh-hhhHHHHHHHHHHHhcCCCCHHHH----HHHHHHh
Q 015434 161 RPKVS--STQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIK-ATEPFFSVLLSAMFLGEFPTLWVV----GSLIPIM 233 (407)
Q Consensus 161 ~~~~~--~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~-~~~Pvft~lls~~~l~er~s~~~~----~~~~~~~ 233 (407)
+|..+ .+.+..-+..|+++..++...+.|+++..++.+-=+. ....+.+.+.+.++++|..+..++ +++++++
T Consensus 35 ~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~lii 114 (269)
T PF06800_consen 35 QPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLII 114 (269)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHH
Confidence 44554 3777788899999999999999999999998885444 677888999999999997776664 5889999
Q ss_pred hhheeeeccccc--------ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcC
Q 015434 234 GGVALASVTEVS--------FNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEG 305 (407)
Q Consensus 234 ~Gv~l~~~~~~~--------~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~ 305 (407)
+|+++....|.+ ....|+...+++.+.|..|.++.|. .+.|++....-+.+--.+-.+.+....+.
T Consensus 115 iGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~------~~~~~~~~~lPqaiGm~i~a~i~~~~~~~ 188 (269)
T PF06800_consen 115 IGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA------FHVSGWSAFLPQAIGMLIGAFIFNLFSKK 188 (269)
T ss_pred HHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh------cCCChhHhHHHHHHHHHHHHHHHhhcccc
Confidence 999998876522 1256999999999999999999765 34566665554433222211222221111
Q ss_pred ccchhhhHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchh----HH
Q 015434 306 VTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAI----NA 381 (407)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~----~~ 381 (407)
. ..+ ...+ .-+++++.+-..|.+.+...++.+..+.=.+.-+..+++++.+.+++||+=+.. .+
T Consensus 189 ~-----~~~--k~~~-----~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~ 256 (269)
T PF06800_consen 189 P-----FFE--KKSW-----KNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTL 256 (269)
T ss_pred c-----ccc--cchH-----HhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHH
Confidence 1 111 1111 123444444444544567778888888777788889999999999999986654 66
Q ss_pred HHHHHHHHHHHH
Q 015434 382 FGTGIALAGVFL 393 (407)
Q Consensus 382 ~G~~lil~G~~l 393 (407)
+|.++++.|..+
T Consensus 257 ~G~~Liv~G~il 268 (269)
T PF06800_consen 257 IGLILIVIGAIL 268 (269)
T ss_pred HHHHHHHHhhhc
Confidence 788888887653
No 40
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.98 E-value=6.7e-09 Score=85.43 Aligned_cols=125 Identities=16% Similarity=0.170 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHHH
Q 015434 259 LTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQ 338 (407)
Q Consensus 259 ~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (407)
++||.+.++.|+.. ++.|+.....+....+.+ +.+...+.+..+.. ... .. .+.. ....+.++....+
T Consensus 1 ~~~a~~~~~~k~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~-~~-~~~~---~~~~~~~~~~~~~ 68 (126)
T PF00892_consen 1 FSWAIYSVFSKKLL----KKISPLSITFWRFLIAGI-LLILLLILGRKPFK--NLS-PR-QWLW---LLFLGLLGTALAY 68 (126)
T ss_pred ceeeeHHHHHHHHh----ccCCHHHHHHHHHHHHHH-HHHHHHhhcccccc--CCC-hh-hhhh---hhHhhccceehHH
Confidence 46788999999988 568999999999999987 66665555443211 011 11 1111 1122222222333
Q ss_pred HHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHH
Q 015434 339 QVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYS 395 (407)
Q Consensus 339 ~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~ 395 (407)
...+..+++.++...++...++|+++.++++++++|+++..+++|+++++.|+++..
T Consensus 69 ~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 69 LLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 344788999999999999999999999999999999999999999999999998754
No 41
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.91 E-value=9.1e-09 Score=82.65 Aligned_cols=135 Identities=15% Similarity=0.148 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHH
Q 015434 250 GFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLI 329 (407)
Q Consensus 250 G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (407)
..++++++++++++..++.|--. +++||..-...-++...+++....+..+.++.... . ....+..+++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl----~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~-~------~~k~~lflil 72 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGL----EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGE-I------GPKSWLFLIL 72 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----cccCccHHHHHHHHHHHHHHHHHHHhcCceecccc-c------CcceehhhhH
Confidence 46889999999999999999877 67777665666666666666666666655432211 1 1122344455
Q ss_pred HHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHH
Q 015434 330 AAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYS 395 (407)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~ 395 (407)
+|+...+..++.|++++.-.+..+.-..-..++++++++++++||+++..+++|++++.+|..+..
T Consensus 73 SGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 73 SGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 555555544555899998888887778888999999999999999999999999999999986543
No 42
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.72 E-value=7.7e-07 Score=83.20 Aligned_cols=117 Identities=25% Similarity=0.237 Sum_probs=91.9
Q ss_pred HHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHH-HHHHHHHHHhhhcCcchhhH
Q 015434 121 IFNIYNKQVLKVYRF-PVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALV-HTLGNLFTNMSLGKVAVSFT 198 (407)
Q Consensus 121 ~~~~~~K~~l~~~~~-P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l-~~~~~~~~~~al~~~s~s~~ 198 (407)
...+..|...++.+. +..+..+++.++.+++.+........+..+.+.+...+..+++ ......+++.++++.+++.+
T Consensus 142 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 221 (260)
T TIGR00950 142 LGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA 221 (260)
T ss_pred HHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence 556778888766542 3555567888888877765544333233355566666667766 45678999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhe
Q 015434 199 HTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVA 237 (407)
Q Consensus 199 ~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~ 237 (407)
+++.+++|++++++++++++|+++..++.++++++.|+.
T Consensus 222 s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 222 SILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999863
No 43
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.67 E-value=1.6e-06 Score=82.85 Aligned_cols=140 Identities=13% Similarity=0.120 Sum_probs=103.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHH
Q 015434 246 FNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYV 325 (407)
Q Consensus 246 ~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (407)
....|.++.+++++.|+...+..|.. .++++.++..+...++.+++.+......+.. . ...... ..... .
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-----~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~--~-~~~~~~-~~~~~-~ 74 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-----YYVPADEILTHRVIWSFFFMVVLMSICRQWS--Y-LKTLIQ-TPQKI-F 74 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHccHH--H-HHHHHc-CHHHH-H
Confidence 34679999999999999999999753 4588999999999999887777654432211 1 000000 11111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHH
Q 015434 326 RSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYS 395 (407)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~ 395 (407)
.....+++...++...++.++++++...++.....|+++.++++++++|+++..+++|+++.++|+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 75 MLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 1223333334444455889999999999999999999999999999999999999999999999988754
No 44
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.65 E-value=1.8e-06 Score=80.75 Aligned_cols=140 Identities=14% Similarity=0.138 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHH
Q 015434 249 AGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSL 328 (407)
Q Consensus 249 ~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (407)
.|.++.++++++|+...+..|. . .++++.++.++-.+++.+.+.+.................... ...+....
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~----~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 74 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-L----KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQK--RPLILSLL 74 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-h----ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCccc--chHHHHHH
Confidence 4889999999999999999987 4 358999999999999988777665443321100001110011 11122233
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHH
Q 015434 329 IAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYS 395 (407)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~ 395 (407)
..+++....+...++.++++++.+.++.....|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 3344344444455788999999999999999999999999999999999999999999999987654
No 45
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.52 E-value=3.7e-06 Score=79.75 Aligned_cols=132 Identities=12% Similarity=0.079 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhc-CccchhhhHhhcCCchHHHHHHHHH
Q 015434 251 FWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIME-GVTFTPAYLQSAGLNLKEVYVRSLI 329 (407)
Q Consensus 251 ~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (407)
+++.+++++++|.+.+..|+..++ .++ ...+....+.+.+.|+..... ...+. ..+.. .+.....
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~----~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~---~~~~~~~ 68 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK----EPD--FLWWALLAHSVLLTPYGLWYLAQVGWS-----RLPAT---FWLLLAI 68 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc----hhH--HHHHHHHHHHHHHHHHHHHhcccCCCC-----Ccchh---hHHHHHH
Confidence 567889999999999999987632 223 235555666666777655421 11111 00111 1222333
Q ss_pred HHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHH
Q 015434 330 AAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSR 396 (407)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~ 396 (407)
.++....+..+.+..+++.++...+......|+++.+++++++||+++..+++|+++++.|+++...
T Consensus 69 ~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 69 SAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4444445555557888999999999999999999999999999999999999999999999987654
No 46
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.46 E-value=0.00022 Score=68.83 Aligned_cols=233 Identities=10% Similarity=0.026 Sum_probs=143.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHH-hhhhHHHHHHHHHHHhcCCC-------CHHHHHHHHHHhhh
Q 015434 164 VSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTI-KATEPFFSVLLSAMFLGEFP-------TLWVVGSLIPIMGG 235 (407)
Q Consensus 164 ~~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i-~~~~Pvft~lls~~~l~er~-------s~~~~~~~~~~~~G 235 (407)
.+.+.+..-+..|++...+++....+++++.++...-+ ..+.-++..++..++++|-. ...-.++++++++|
T Consensus 68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG 147 (345)
T PRK13499 68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG 147 (345)
T ss_pred cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence 45667777888999999999999999999999998544 47788889999999988644 23456889999999
Q ss_pred heeeec----ccc---------cccHHHHHHHHHHHHHHHHHHHHHHHhhhc----cccCCChhHHHHHHH---HHHHHH
Q 015434 236 VALASV----TEV---------SFNWAGFWSAMASNLTNQSRNVLSKKVMVN----KEEALDNITLFSIIT---VMSFIL 295 (407)
Q Consensus 236 v~l~~~----~~~---------~~~~~G~~~~l~s~~~~a~~~vl~k~~~~~----~~~~~~~~~l~~~~~---~~~~l~ 295 (407)
+++... .|. .....|++.++++.+.+++|......-..- .+.+.++.....-+. +.+.++
T Consensus 148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~ 227 (345)
T PRK13499 148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAI 227 (345)
T ss_pred HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHH
Confidence 999876 332 123689999999999999999332221100 013445543332222 234333
Q ss_pred HHH-HHHHh--cCccch-hhhHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhH----HhHHHHHHHHHHHHH
Q 015434 296 MIP-VTLIM--EGVTFT-PAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVT----HSVGNCVKRVVVIVS 367 (407)
Q Consensus 296 l~p-~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~----~sv~~~l~~v~~iil 367 (407)
... +..+. ...... ..........+..-++...+.++..+..+....+.-++.+... +.+.+.+..+++.+.
T Consensus 228 ~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw 307 (345)
T PRK13499 228 TNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW 307 (345)
T ss_pred HHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence 322 11111 111110 0011000001112223345555555555554455555553332 224446777899999
Q ss_pred HHHHcCCcCc------hhHHHHHHHHHHHHHHHHHh
Q 015434 368 SVMFFRTPVS------AINAFGTGIALAGVFLYSRV 397 (407)
Q Consensus 368 s~~~fge~~s------~~~~~G~~lil~G~~ly~~~ 397 (407)
+. +++|.=+ ...++|++++++|..+....
T Consensus 308 Gi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 308 GL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred hh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 99 5998766 67899999999998876543
No 47
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.38 E-value=1.6e-05 Score=75.82 Aligned_cols=118 Identities=17% Similarity=0.158 Sum_probs=84.9
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHH-HHHHHHHHHhhhcCcchhhHH
Q 015434 121 IFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALV-HTLGNLFTNMSLGKVAVSFTH 199 (407)
Q Consensus 121 ~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l-~~~~~~~~~~al~~~s~s~~~ 199 (407)
...+..|...++.+ |...+ +...++.+++.+...........+...+...+..+++ ..+.+.+++.++++++++.++
T Consensus 162 ~~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as 239 (293)
T PRK10532 162 IYILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFG 239 (293)
T ss_pred HHHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHH
Confidence 45566676655544 55554 4445555554443333221122344444445566666 445688999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeee
Q 015434 200 TIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALAS 240 (407)
Q Consensus 200 ~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~ 240 (407)
++..++|++..++++++++|+++..++++.+++++|++...
T Consensus 240 ~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 240 TLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988764
No 48
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.36 E-value=2.3e-05 Score=76.80 Aligned_cols=135 Identities=13% Similarity=0.225 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCcc-chhhhHhhcCCchHHHHHHHHH
Q 015434 251 FWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVT-FTPAYLQSAGLNLKEVYVRSLI 329 (407)
Q Consensus 251 ~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 329 (407)
.+.+++.-++|+...++.|..++ ..+++..+.+|-..++.++++|+....+... ..... +.. +....+
T Consensus 15 ~~~~~~~q~~~~~~~~~~k~a~~---~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~-------~~~-~~~l~l 83 (358)
T PLN00411 15 LTAMLATETSVVGISTLFKVATS---KGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLS-------VSI-LSKIGL 83 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---CCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcch-------HHH-HHHHHH
Confidence 45556778899999999999884 6889999999999999998888876654211 11100 111 122223
Q ss_pred HHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHH------cCCcCchhHHHHHHHHHHHHHHHHH
Q 015434 330 AAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMF------FRTPVSAINAFGTGIALAGVFLYSR 396 (407)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~------fge~~s~~~~~G~~lil~G~~ly~~ 396 (407)
.++++..++...+..++++++...++..+..|+++.++++++ ++|+++..+++|+++.++|+.+...
T Consensus 84 ~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 84 LGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 333333444456788999999999999999999999999999 6999999999999999999987654
No 49
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.33 E-value=4.8e-06 Score=79.40 Aligned_cols=64 Identities=25% Similarity=0.340 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeec
Q 015434 178 VHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (407)
Q Consensus 178 l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~ 241 (407)
++.++..+...|+.+.|.+..+-+.+...++.++++..++|||++++.+.|+++++.|..++..
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 4677888999999999999999999999999999999999999999999999999999987653
No 50
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.32 E-value=1.7e-05 Score=75.65 Aligned_cols=119 Identities=14% Similarity=0.057 Sum_probs=89.8
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhccc-CC-CCCHHHHHHHHHHHHH-HHHHHHHHHhhhcCcchhhH
Q 015434 122 FNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLY-RP-KVSSTQLAAILPLALV-HTLGNLFTNMSLGKVAVSFT 198 (407)
Q Consensus 122 ~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~-~~-~~~~~~~~~~~~~g~l-~~~~~~~~~~al~~~s~s~~ 198 (407)
..+..|..-. +++...+.+++.++.+++.+....... .. ..+.+.+..++..+++ ..+...+++.++++.+++.+
T Consensus 165 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~ 242 (292)
T PRK11272 165 GSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALA 242 (292)
T ss_pred HHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHH
Confidence 3445555432 235566788888887776654433221 11 1245566666777776 45678899999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecc
Q 015434 199 HTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT 242 (407)
Q Consensus 199 ~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~ 242 (407)
+++..++|++.+++++++++|+++..++++.+++++|+.+....
T Consensus 243 s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 243 TSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999876543
No 51
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.27 E-value=2.3e-05 Score=74.91 Aligned_cols=117 Identities=12% Similarity=0.097 Sum_probs=83.0
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHH
Q 015434 121 IFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLY-RPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTH 199 (407)
Q Consensus 121 ~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~ 199 (407)
..++++|...++.+ |.... .. ...+.+.+....... ....+.+.+..++..++...+.+.+++.++++.+++.++
T Consensus 170 ~~~v~~k~~~~~~~-~~~~~--~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s 245 (295)
T PRK11689 170 AYCNVTRKYARGKN-GITLF--FI-LTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLA 245 (295)
T ss_pred HHHHHHhhccCCCC-chhHH--HH-HHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence 45566777654433 44332 22 222332222222211 123455566666666665666799999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeec
Q 015434 200 TIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (407)
Q Consensus 200 ~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~ 241 (407)
.+.+++|++..++++++++|+++..++++.+++++|+.+...
T Consensus 246 ~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 246 TASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 999999999999999999999999999999999999877654
No 52
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.27 E-value=4.3e-05 Score=63.42 Aligned_cols=122 Identities=15% Similarity=0.130 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHH
Q 015434 249 AGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSL 328 (407)
Q Consensus 249 ~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (407)
.|.++.+.+.++.+...++.|+-+++.+ +.+.. .. . ...+ . ...+ ....++..+.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~---~~-~-~~~~----~-~~~~--------------p~~~i~lgl~ 56 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHA---WD-F-IAAL----L-AFGL--------------ALRAVLLGLA 56 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC-Cccch---hH-H-HHHH----H-HHhc--------------cHHHHHHHHH
Confidence 4788999999999999999998774321 11111 00 0 0000 0 0000 1113445556
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHH--HcCCcCchhHHHHHHHHHHHHHHHHHhcc
Q 015434 329 IAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVM--FFRTPVSAINAFGTGIALAGVFLYSRVKR 399 (407)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~--~fge~~s~~~~~G~~lil~G~~ly~~~~~ 399 (407)
..+++++++ ...+++.+...+.-...+..+...+.++. +|||++|+.+++|++++++|+++.++.++
T Consensus 57 ~~~la~~~w----~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 57 GYALSMLCW----LKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHH----HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 666666666 57789998888776666777777777774 89999999999999999999999876544
No 53
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.22 E-value=2.8e-05 Score=62.88 Aligned_cols=64 Identities=14% Similarity=0.117 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeee
Q 015434 177 LVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALAS 240 (407)
Q Consensus 177 ~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~ 240 (407)
+.+.+..++...++++++.+.+..+-++.++++.+++++++|||++.+++++++++++|++++.
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3466778999999999999999999999999999999999999999999999999999998764
No 54
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.11 E-value=0.00013 Score=69.79 Aligned_cols=121 Identities=17% Similarity=0.168 Sum_probs=86.1
Q ss_pred HHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHH-Hhccc------CCCCCHHHHHHHHHHHHHH-HHHHHHHHhhh
Q 015434 121 IFNIYNKQVLKVYRFP--VTVTTCQFGVGTVLVLLLW-TFNLY------RPKVSSTQLAAILPLALVH-TLGNLFTNMSL 190 (407)
Q Consensus 121 ~~~~~~K~~l~~~~~P--~~l~~~r~~~~~~~l~~~~-~~~~~------~~~~~~~~~~~~~~~g~l~-~~~~~~~~~al 190 (407)
..+++.|...++.+.+ .....++++.+.+...... ..... ....+.+.+..++..+++. .+...+++.++
T Consensus 157 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l 236 (299)
T PRK11453 157 CGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLL 236 (299)
T ss_pred HHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666665544433 3444556655544333221 11111 0123456677777777654 45688999999
Q ss_pred cCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeec
Q 015434 191 GKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (407)
Q Consensus 191 ~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~ 241 (407)
++.++..++.+..++|++..++++++++|+++..++++.+++++|+.+...
T Consensus 237 ~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 237 GRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999987654
No 55
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.07 E-value=0.00022 Score=60.85 Aligned_cols=125 Identities=18% Similarity=0.191 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHHhc------CCchHHHHHHHHHHHHHHHHHHHHhccc-C--C---CC-------CHHHHHHHHHHH
Q 015434 116 YFFNIIFNIYNKQVLKV------YRFPVTVTTCQFGVGTVLVLLLWTFNLY-R--P---KV-------SSTQLAAILPLA 176 (407)
Q Consensus 116 ~~~~~~~~~~~K~~l~~------~~~P~~l~~~r~~~~~~~l~~~~~~~~~-~--~---~~-------~~~~~~~~~~~g 176 (407)
.++.....++.|..+++ ...++.+..+....+.+++.+....... . + .. +.+.+..++..|
T Consensus 9 ~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (153)
T PF03151_consen 9 SLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSG 88 (153)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHH
Confidence 34444566677777776 3357778777777777777665443322 1 0 00 224455566667
Q ss_pred HHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeee
Q 015434 177 LVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALAS 240 (407)
Q Consensus 177 ~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~ 240 (407)
++..+.++..+..++++++-+.+++....-+.+.++++++++|+++..++.|+++.++|+++..
T Consensus 89 ~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 89 LLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 7778889999999999999999999999999999999999999999999999999999998754
No 56
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.00 E-value=5.8e-05 Score=72.32 Aligned_cols=124 Identities=16% Similarity=0.060 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCH-----------H-HHHHHHHHHH-HHHH
Q 015434 117 FFNIIFNIYNKQVLK--VYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSS-----------T-QLAAILPLAL-VHTL 181 (407)
Q Consensus 117 ~~~~~~~~~~K~~l~--~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~-----------~-~~~~~~~~g~-l~~~ 181 (407)
++.....++.|...+ +. +|..++.+++..+.+++.+........+.... . .+...+..+. .+..
T Consensus 155 ~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (302)
T TIGR00817 155 ITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHF 233 (302)
T ss_pred HHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHH
Confidence 333455667777776 33 37888899998888777765443211010000 0 0111112222 2333
Q ss_pred HHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeec
Q 015434 182 GNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (407)
Q Consensus 182 ~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~ 241 (407)
.+.+.+.+++++++..+++.....|++++++++++++|+++..+++|.+++++|+.+...
T Consensus 234 ~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 234 YQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 346667899999999999999999999999999999999999999999999999987654
No 57
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.98 E-value=0.00039 Score=68.08 Aligned_cols=138 Identities=14% Similarity=0.071 Sum_probs=94.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCC-hhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHH
Q 015434 247 NWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALD-NITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYV 325 (407)
Q Consensus 247 ~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~-~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (407)
++.-..+.+.-=.+...+++..|.++ +..+ |+.+..++..++.+++..+.. .+....++ .. .....+.
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl----~~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~--~~----~~~~~~~ 115 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLAL----NMLPLPWTISSLQLFVGWLFALLYWA-TGFRKIPR--IK----SLKLFLK 115 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH----HhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCC--CC----CHHHHHH
Confidence 34444444555555566788888888 4567 999999999998776554422 22111110 00 0111222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHH
Q 015434 326 RSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYS 395 (407)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~ 395 (407)
.++..++++...+...+..++++++..+++...+.|+++.+++.++++|+++..+++|++++++|+.+..
T Consensus 116 ~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 116 NFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 3344444444434444678899999999999999999999999999999999999999999999998754
No 58
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.94 E-value=0.00043 Score=64.14 Aligned_cols=141 Identities=16% Similarity=0.227 Sum_probs=102.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHH
Q 015434 247 NWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVR 326 (407)
Q Consensus 247 ~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (407)
...|+++++.+-+.|+.--.+.|-+ ++.++.++..+-.+.+..+++........+........ +...+...
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-----~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~----~p~~~~~~ 75 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-----EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLK----QPKTLLML 75 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-----ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh----CcHHHHHH
Confidence 3479999999999999999988765 67888999999888888877766655544322111111 22222222
Q ss_pred HHHHHHHHHHHHH-HHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhc
Q 015434 327 SLIAAICYHAYQQ-VSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVK 398 (407)
Q Consensus 327 ~~~~~~~~~~~~~-~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~ 398 (407)
.+.+.+. ..|. .-.|+...-..+.+|....++|.+.+++|.++++|+++..|++..++..+|+..-.+..
T Consensus 76 ~l~a~li--~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 76 ALTALLI--GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHH--HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 2222221 1222 22477888899999999999999999999999999999999999999999998765443
No 59
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.88 E-value=0.00051 Score=55.68 Aligned_cols=57 Identities=16% Similarity=0.185 Sum_probs=50.6
Q ss_pred HHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhcc
Q 015434 342 YMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKR 399 (407)
Q Consensus 342 ~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~ 399 (407)
++.+++.++ .......+.|+++.+++.++|+|+++..+++|.+++++|+.+..+.+.
T Consensus 53 ~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 53 FYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 577788885 666888899999999999999999999999999999999998877654
No 60
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.76 E-value=0.00035 Score=66.60 Aligned_cols=113 Identities=20% Similarity=0.172 Sum_probs=82.3
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHH----HHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhc-Ccch
Q 015434 121 IFNIYNKQVLKVYRFPVTVTTCQFG----VGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTNMSLG-KVAV 195 (407)
Q Consensus 121 ~~~~~~K~~l~~~~~P~~l~~~r~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~al~-~~s~ 195 (407)
......|.. +. .|...++.|+. .+.++..+. ++.++. ..+.....+..|+++...+.++..+++ +.++
T Consensus 166 ~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~ 238 (290)
T TIGR00776 166 VYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGH---ILAKPL-KKYAILLNILPGLMWGIGNFFYLFSAQPKVGV 238 (290)
T ss_pred HHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHH---hcccch-HHHHHHHHHHHHHHHHHHHHHHHHHcccccch
Confidence 344566654 22 36666555554 333333322 111222 233444455588888888999999999 9999
Q ss_pred hhHHHHhhhhHHHHHHHHHHHhcCCCCHHHH----HHHHHHhhhheeee
Q 015434 196 SFTHTIKATEPFFSVLLSAMFLGEFPTLWVV----GSLIPIMGGVALAS 240 (407)
Q Consensus 196 s~~~~i~~~~Pvft~lls~~~l~er~s~~~~----~~~~~~~~Gv~l~~ 240 (407)
+.+.++.+.+|+...+.+++++||+.+++++ ++.+++++|+.+..
T Consensus 239 ~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 239 ATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 99999999988764
No 61
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.66 E-value=0.0023 Score=60.21 Aligned_cols=119 Identities=24% Similarity=0.310 Sum_probs=84.9
Q ss_pred HHHHHHHHHHhcCCchHHHHH-HHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHH-HHHHHHHhhhcCcchhhH
Q 015434 121 IFNIYNKQVLKVYRFPVTVTT-CQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHT-LGNLFTNMSLGKVAVSFT 198 (407)
Q Consensus 121 ~~~~~~K~~l~~~~~P~~l~~-~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~-~~~~~~~~al~~~s~s~~ 198 (407)
.....+|... +.+ +..... +++.....+......... ....+.+.+......+++.. .+..+.+.+++..+++..
T Consensus 168 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~ 244 (292)
T COG0697 168 LYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFLSGF-GAPILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLV 244 (292)
T ss_pred HHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHhccc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence 4556666665 222 444444 444422222222222111 12345667777778888766 589999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecc
Q 015434 199 HTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT 242 (407)
Q Consensus 199 ~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~ 242 (407)
+.+..+.|++..++++++++|+++..++++.++++.|+.+....
T Consensus 245 ~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 245 ALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999876543
No 62
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.65 E-value=0.0009 Score=54.60 Aligned_cols=71 Identities=14% Similarity=0.238 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChh-HHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhcccc
Q 015434 327 SLIAAICYHAYQQVSYMILQRVSPV-THSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRIK 401 (407)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~~s~~-~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~~ 401 (407)
+...+++++++ ...+++.+.. .+++..-+..+.+.++++++|||++++.+++|+.++++|+...+...++.
T Consensus 37 i~~~~~sf~~l----s~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~~ 108 (120)
T PRK10452 37 LVMISLSYIFL----SFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKA 108 (120)
T ss_pred HHHHHHHHHHH----HHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 34444444444 4566776654 46777778899999999999999999999999999999999887655433
No 63
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.64 E-value=2.3e-05 Score=70.42 Aligned_cols=219 Identities=16% Similarity=0.140 Sum_probs=146.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHH-hhhhHHHHHHHHHHHhcCCCCHHHH----HHHHHHhhh
Q 015434 161 RPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTI-KATEPFFSVLLSAMFLGEFPTLWVV----GSLIPIMGG 235 (407)
Q Consensus 161 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i-~~~~Pvft~lls~~~l~er~s~~~~----~~~~~~~~G 235 (407)
.|..+...+..-+..|+++..++...+-|+++..++-+.=+ ..+..+-+.+++.+.++|-.+..++ .+++++++|
T Consensus 51 ~p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG 130 (288)
T COG4975 51 SPELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIG 130 (288)
T ss_pred cCccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHh
Confidence 56667777777788899999999999999999999888544 3567788889999999998877664 688899999
Q ss_pred heeeecccc--------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCcc
Q 015434 236 VALASVTEV--------SFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVT 307 (407)
Q Consensus 236 v~l~~~~~~--------~~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~ 307 (407)
+.+....|. ++.-.|+...+.|.+.|-.|.++.+.+.- +..+.+--+...+.++.+.+ ....++..
T Consensus 131 ~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v---~g~saiLPqAiGMv~~ali~---~~~~~~~~ 204 (288)
T COG4975 131 IYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFDV---DGLSAILPQAIGMVIGALIL---GFFKMEKR 204 (288)
T ss_pred heEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccccc---cchhhhhHHHHHHHHHHHHH---hhcccccc
Confidence 999987663 12247889989999999999888876431 33344333333344433322 11122221
Q ss_pred chhhhHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchh----HHHH
Q 015434 308 FTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAI----NAFG 383 (407)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~----~~~G 383 (407)
.+... ..-.+.++..-..|...+...++.+-.+.=.+.-+-.+++++-+.++++|+=|.. -++|
T Consensus 205 ~~K~t------------~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iG 272 (288)
T COG4975 205 FNKYT------------WLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIG 272 (288)
T ss_pred hHHHH------------HHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhh
Confidence 21111 1122333333344444456666666555333444667888999999999997764 5678
Q ss_pred HHHHHHHHHHHHHh
Q 015434 384 TGIALAGVFLYSRV 397 (407)
Q Consensus 384 ~~lil~G~~ly~~~ 397 (407)
+++++.|..+....
T Consensus 273 iilivvgai~lg~~ 286 (288)
T COG4975 273 IILIVVGAILLGIA 286 (288)
T ss_pred HHHHHHHhhhhhee
Confidence 88888887765543
No 64
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.60 E-value=0.0015 Score=62.59 Aligned_cols=130 Identities=15% Similarity=0.108 Sum_probs=89.5
Q ss_pred HHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHHHHHHHHHHHHH
Q 015434 261 NQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQV 340 (407)
Q Consensus 261 ~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (407)
+..+.++++++.+.+...-.+..+.+.+.....+...+........... ......+ ...+++..+.+..
T Consensus 12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~----~~~~~~~~~~~~~ 80 (303)
T PF08449_consen 12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSR-------KIPLKKY----AILSFLFFLASVL 80 (303)
T ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCC-------cChHHHH----HHHHHHHHHHHHH
Confidence 3446678888886543332466677777777666655554433311111 1111111 2223444444455
Q ss_pred HHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhcccc
Q 015434 341 SYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRIK 401 (407)
Q Consensus 341 ~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~~ 401 (407)
....+++++.-++.+....+++.+.+++++++|++.+..++++.+++.+|+.+....+.++
T Consensus 81 ~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~ 141 (303)
T PF08449_consen 81 SNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSS 141 (303)
T ss_pred HHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccc
Confidence 6788899999999999999999999999999999999999999999999999988765443
No 65
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.60 E-value=0.00017 Score=67.52 Aligned_cols=66 Identities=17% Similarity=0.191 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecc
Q 015434 177 LVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT 242 (407)
Q Consensus 177 ~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~ 242 (407)
+.+.++...++.|+.+.|++..+-+.++..+..++++..++|||+++...++++++++|-.+++..
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence 347788999999999999999999999999999999999999999999999999999998777654
No 66
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.53 E-value=0.00049 Score=57.09 Aligned_cols=71 Identities=18% Similarity=0.068 Sum_probs=61.5
Q ss_pred HHHH-HHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHH--HhcCCCCHHHHHHHHHHhhhheeeeccc
Q 015434 173 LPLA-LVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAM--FLGEFPTLWVVGSLIPIMGGVALASVTE 243 (407)
Q Consensus 173 ~~~g-~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~--~l~er~s~~~~~~~~~~~~Gv~l~~~~~ 243 (407)
+..| +++.+..++.+.++++.+++.+.-+.+..+.++.+.++. +++|+++..++++++++++|++++..++
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 3344 457788999999999999999999999998888888885 8999999999999999999999887543
No 67
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.50 E-value=0.0013 Score=53.18 Aligned_cols=54 Identities=20% Similarity=0.290 Sum_probs=47.8
Q ss_pred HHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHH
Q 015434 342 YMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYS 395 (407)
Q Consensus 342 ~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~ 395 (407)
...+++.+...+...-.+.++.+.++++++|||+++..+++|+.++++|+.+..
T Consensus 55 ~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 55 LLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 567788888776666669999999999999999999999999999999998754
No 68
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.45 E-value=0.00099 Score=54.36 Aligned_cols=71 Identities=17% Similarity=0.351 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcchhhHHHHh-hhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecc
Q 015434 172 ILPLALVHTLGNLFTNMSLGKVAVSFTHTIK-ATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT 242 (407)
Q Consensus 172 ~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~-~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~ 242 (407)
.+...+++++..++...++++++.+.+..+- ...-+.+.+.+.++++|+++..+++++.++++|++++...
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 3455566788899999999999999998774 6889999999999999999999999999999999887553
No 69
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.36 E-value=0.0052 Score=55.82 Aligned_cols=118 Identities=17% Similarity=0.177 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHH-HHHHHHHHhhhcCcchhhH
Q 015434 120 IIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVH-TLGNLFTNMSLGKVAVSFT 198 (407)
Q Consensus 120 ~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~-~~~~~~~~~al~~~s~s~~ 198 (407)
..+.+..|.+-...+ ...-+..-+.+++++.+++........-.+++....-+..+++. .+-+.+.+.++...+..++
T Consensus 161 a~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F 239 (292)
T COG5006 161 ALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTF 239 (292)
T ss_pred HHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHH
Confidence 355555555543222 23344667777777777665533211123344455555556664 3458899999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhee
Q 015434 199 HTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVAL 238 (407)
Q Consensus 199 ~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l 238 (407)
.++.+++|.+..+.++++++|+++..||.++..++.+.+=
T Consensus 240 ~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG 279 (292)
T COG5006 240 GTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG 279 (292)
T ss_pred HHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999887653
No 70
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.34 E-value=0.0045 Score=49.76 Aligned_cols=57 Identities=18% Similarity=0.164 Sum_probs=48.2
Q ss_pred HHHhhccChh-HHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhc
Q 015434 342 YMILQRVSPV-THSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVK 398 (407)
Q Consensus 342 ~~~l~~~s~~-~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~ 398 (407)
..++++.+.. .+++..-+..+.++++++++|||++++.+++|+.++++|+...+..+
T Consensus 48 ~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 48 AQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 3556776654 47777778899999999999999999999999999999999987654
No 71
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.29 E-value=0.014 Score=46.84 Aligned_cols=64 Identities=11% Similarity=0.155 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHhhccCh-hHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHH
Q 015434 328 LIAAICYHAYQQVSYMILQRVSP-VTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYS 395 (407)
Q Consensus 328 ~~~~~~~~~~~~~~~~~l~~~s~-~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~ 395 (407)
...++++++. ...+++.+. +.+++..-+..+.+.+.++++|||++++.+++|+.+++.|+...+
T Consensus 43 ~~~~~sf~~L----s~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 43 AAVLAAFSAL----SQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHH----HHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3334444444 355677765 458888889999999999999999999999999999999998753
No 72
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.22 E-value=0.0081 Score=55.94 Aligned_cols=70 Identities=27% Similarity=0.194 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHH----HHHHHHhhhhee
Q 015434 169 LAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVV----GSLIPIMGGVAL 238 (407)
Q Consensus 169 ~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~----~~~~~~~~Gv~l 238 (407)
..+-+..|+++..++.++..+-+.+.++.+..+..+..+...+.+.+++||+=+++++ ++++++++|.++
T Consensus 195 ~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 195 SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 3444677999999999999999999999999999999999999999999998887765 455555556543
No 73
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.21 E-value=0.0027 Score=51.09 Aligned_cols=69 Identities=16% Similarity=0.131 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHhhhcCcchhhHHHHh-hhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecc
Q 015434 174 PLALVHTLGNLFTNMSLGKVAVSFTHTIK-ATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT 242 (407)
Q Consensus 174 ~~g~l~~~~~~~~~~al~~~s~s~~~~i~-~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~ 242 (407)
..-+++.+...+...+++++|.+.+..+- ...-+.+.+.++++++|++++.+++++.++++|+++....
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 34455777788889999999999998774 5788899999999999999999999999999999987553
No 74
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.20 E-value=0.005 Score=49.36 Aligned_cols=68 Identities=6% Similarity=-0.057 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcchhhHHHHh-hhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheee
Q 015434 172 ILPLALVHTLGNLFTNMSLGKVAVSFTHTIK-ATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALA 239 (407)
Q Consensus 172 ~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~-~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~ 239 (407)
.+..-+.+....++...+++++|.+.+..+- ..--+.+.+.+++++||++++.+++++.++++|++..
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 3444556777888889999999999996655 5678889999999999999999999999999999865
No 75
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.09 E-value=0.0055 Score=48.82 Aligned_cols=69 Identities=12% Similarity=0.082 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHhhhcCcchhhHHHHh-hhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeec
Q 015434 173 LPLALVHTLGNLFTNMSLGKVAVSFTHTIK-ATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (407)
Q Consensus 173 ~~~g~l~~~~~~~~~~al~~~s~s~~~~i~-~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~ 241 (407)
+..-+++....++...+++++|.+.+..+= ..--+.+.+.+++++||++++.+++++.++++|++....
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 344556777888889999999999996665 477889999999999999999999999999999987643
No 76
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.05 E-value=0.013 Score=56.68 Aligned_cols=138 Identities=11% Similarity=0.026 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHH--HHHHHHH-HhcCccchhhhHhhcCCchHHHH
Q 015434 248 WAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFI--LMIPVTL-IMEGVTFTPAYLQSAGLNLKEVY 324 (407)
Q Consensus 248 ~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l--~l~p~~~-~~~~~~~~~~~~~~~~~~~~~~~ 324 (407)
..|+++++++++|++.+.+-+|+. +...++.. |- ..+.+ ++.|+.. ..... ...+.........+
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~~------k~w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~----~f~~~~~~~~~~~~ 73 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKKV------KKWSWETM-WS-VGGIFSWLILPWLIAALLLP----DFWAYYSSFSGSTL 73 (345)
T ss_pred HHHHHHHHHHHHHhhccccccccc------CCCchhHH-HH-HHHHHHHHHHHHHHHHHHhh----hHHHHHHhcCHHHH
Confidence 579999999999999999988873 22344444 32 22221 1223111 11111 11111111123445
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccChh-HHhHHHHHHHHHHHHHHHHHcCCcC---c----hhHHHHHHHHHHHHHHHHH
Q 015434 325 VRSLIAAICYHAYQQVSYMILQRVSPV-THSVGNCVKRVVVIVSSVMFFRTPV---S----AINAFGTGIALAGVFLYSR 396 (407)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~l~~~s~~-~~sv~~~l~~v~~iils~~~fge~~---s----~~~~~G~~lil~G~~ly~~ 396 (407)
...++++++.-..|...+..+++.+-. +..+..-+..+.+++++.+++||=. + ..-.+|.+++++|+.+..+
T Consensus 74 ~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 74 LPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 556677777666676667777887754 3555666788899999999998633 2 3578899999999998877
Q ss_pred h
Q 015434 397 V 397 (407)
Q Consensus 397 ~ 397 (407)
.
T Consensus 154 A 154 (345)
T PRK13499 154 A 154 (345)
T ss_pred h
Confidence 3
No 77
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.04 E-value=0.0029 Score=58.61 Aligned_cols=74 Identities=19% Similarity=0.230 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhccc
Q 015434 327 SLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRI 400 (407)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~ 400 (407)
..+-++++.+.|...+..+++.+|.++.+....|.+++.++++++++++++..||+++.+.++|+.+.......
T Consensus 20 ~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 20 LAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 44556777778888899999999999999999999999999999999999999999999999999987655443
No 78
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.01 E-value=0.014 Score=46.48 Aligned_cols=64 Identities=8% Similarity=0.123 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHhhccCh-hHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHH
Q 015434 329 IAAICYHAYQQVSYMILQRVSP-VTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSR 396 (407)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~~s~-~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~ 396 (407)
..++++++. ...+++.+. +.+++..-+..+.+.+.++++|||++++.+++|+.+++.|+...+.
T Consensus 38 ~~~~sf~~L----s~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 38 AMIVSMALL----AWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHH----HHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 334444444 355677665 4588888899999999999999999999999999999999988654
No 79
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.99 E-value=0.036 Score=53.62 Aligned_cols=139 Identities=14% Similarity=0.139 Sum_probs=85.9
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH-HHhccc---CCCCCHHHHHHHHHH
Q 015434 100 TELSRKIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLL-WTFNLY---RPKVSSTQLAAILPL 175 (407)
Q Consensus 100 ~~~~~~l~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~-~~~~~~---~~~~~~~~~~~~~~~ 175 (407)
.+..+.+..+....+|. ..+++.|+...+.+....+.+.-+ ++.++..+. ...... .-..+.+....++..
T Consensus 165 ~~i~GDll~l~~a~lya----~~nV~~E~~v~~~~~~~~lg~~Gl-fg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~ 239 (334)
T PF06027_consen 165 NPILGDLLALLGAILYA----VSNVLEEKLVKKAPRVEFLGMLGL-FGFIISGIQLAILERSGIESIHWTSQVIGLLVGY 239 (334)
T ss_pred ccchhHHHHHHHHHHHH----HHHHHHHHhcccCCHHHHHHHHHH-HHHHHHHHHHHheehhhhhccCCChhhHHHHHHH
Confidence 34455555555555554 345567777776553333322222 222222221 111111 111233333333333
Q ss_pred HHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeeccc
Q 015434 176 ALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE 243 (407)
Q Consensus 176 g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~ 243 (407)
++.......+....+++.++....+-.-++.++.++++.++.++++++..++|.+++++|.++....+
T Consensus 240 ~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 240 ALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 33333444455677889999988888889999999999999999999999999999999999987654
No 80
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.98 E-value=0.015 Score=46.09 Aligned_cols=55 Identities=22% Similarity=0.289 Sum_probs=48.2
Q ss_pred HHhhccCh-hHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHh
Q 015434 343 MILQRVSP-VTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRV 397 (407)
Q Consensus 343 ~~l~~~s~-~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~ 397 (407)
..+|+++- +.|++..-+-.+.+.+.++++|||+++..+++|+.++++|+...+..
T Consensus 49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 56677765 45889999999999999999999999999999999999999887654
No 81
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.95 E-value=0.0054 Score=48.51 Aligned_cols=70 Identities=16% Similarity=0.169 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcchhhHHHH-hhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeec
Q 015434 172 ILPLALVHTLGNLFTNMSLGKVAVSFTHTI-KATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (407)
Q Consensus 172 ~~~~g~l~~~~~~~~~~al~~~s~s~~~~i-~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~ 241 (407)
.+..-+.+.....+...++++++.+.+..+ ...-.+.+.+.++++++|+.+..+++++.++++|++....
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 344445567778888999999999998655 4667888999999999999999999999999999987654
No 82
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.76 E-value=0.072 Score=51.02 Aligned_cols=140 Identities=17% Similarity=0.222 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCc---c----chhhhHhhcCCchHHHHH
Q 015434 253 SAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGV---T----FTPAYLQSAGLNLKEVYV 325 (407)
Q Consensus 253 ~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~---~----~~~~~~~~~~~~~~~~~~ 325 (407)
..+...+-.+......|.-..+++.+..+.+.....-++-.+++....+.-+.. + ...+.+. . +.. .+
T Consensus 19 ~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~--~--~~~-~l 93 (345)
T KOG2234|consen 19 SLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILA--A--PRE-TL 93 (345)
T ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHh--C--hHH-HH
Confidence 333444445555555555444344456666666655566555555443322211 0 1111111 1 101 12
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHh
Q 015434 326 RSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRV 397 (407)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~ 397 (407)
-..+-++.+.+-|...|..+.+.+|.++++...+|...+.++++++++++++..||...++.+.|+......
T Consensus 94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~ 165 (345)
T KOG2234|consen 94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP 165 (345)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 233445556666667788999999999999999999999999999999999999999999999999888743
No 83
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.75 E-value=0.083 Score=44.38 Aligned_cols=129 Identities=15% Similarity=0.209 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCC-ChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHH
Q 015434 251 FWSAMASNLTNQSRNVLSKKVMVNKEEAL-DNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLI 329 (407)
Q Consensus 251 ~~~~l~s~~~~a~~~vl~k~~~~~~~~~~-~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (407)
.++++.+.+.-+.+..+.-++. ++. +++.-.......+++.+....++.++.+.. ... +.. .+.|.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~----~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~--~~~--~~p-~w~~l---- 69 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLG----KALGSPLVASFISFGVGFILLLIILLITGRPSLA--SLS--SVP-WWAYL---- 69 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHhCccHHHHHHHHHHHHHHHHHHHHHhcccccc--hhc--cCC-hHHhc----
Confidence 4667777777788877777776 334 477777888888888887777766654221 111 111 22233
Q ss_pred HHHHHHHHHHHHHHHhhccChhHHhHHHH-HHHHHHHHHHHH-HcC---CcCchhHHHHHHHHHHHHH
Q 015434 330 AAICYHAYQQVSYMILQRVSPVTHSVGNC-VKRVVVIVSSVM-FFR---TPVSAINAFGTGIALAGVF 392 (407)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~~s~~~~sv~~~-l~~v~~iils~~-~fg---e~~s~~~~~G~~lil~G~~ 392 (407)
.++++..+-......+.+.++........ -+.+.+.+++.+ +|| +++++.+++|.+++++|++
T Consensus 70 GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 70 GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI 137 (138)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 33333333333457779999987666444 455666777876 443 6799999999999999986
No 84
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.47 E-value=0.12 Score=43.41 Aligned_cols=116 Identities=21% Similarity=0.204 Sum_probs=83.8
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccC--CCCCHHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHH
Q 015434 122 FNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYR--PKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTH 199 (407)
Q Consensus 122 ~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~ 199 (407)
...+|-.+-+....|+.-++..+..+.+.+.+++...+.. ....+.+++. ...|++......+.......+.++.+.
T Consensus 16 q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~-~lGG~lG~~~V~~~~~~vp~lG~~~~~ 94 (138)
T PF04657_consen 16 QAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWA-YLGGLLGVFFVLSNIILVPRLGAALTT 94 (138)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHH-hccHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 3445555555555699999999999988887766554431 1122223333 347888888889999999999998886
Q ss_pred HHh-hhhHHHHHHHHHH----HhcCCCCHHHHHHHHHHhhhhee
Q 015434 200 TIK-ATEPFFSVLLSAM----FLGEFPTLWVVGSLIPIMGGVAL 238 (407)
Q Consensus 200 ~i~-~~~Pvft~lls~~----~l~er~s~~~~~~~~~~~~Gv~l 238 (407)
.+. .-.-+..++++.+ .-|++++..|+++++++++|+.+
T Consensus 95 ~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 95 ILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 655 4557777788875 35689999999999999999864
No 85
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.27 E-value=0.036 Score=43.15 Aligned_cols=57 Identities=19% Similarity=0.161 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhhhcCcchhhHHHH-hhhhHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 015434 176 ALVHTLGNLFTNMSLGKVAVSFTHTI-KATEPFFSVLLSAMFLGEFPTLWVVGSLIPI 232 (407)
Q Consensus 176 g~l~~~~~~~~~~al~~~s~s~~~~i-~~~~Pvft~lls~~~l~er~s~~~~~~~~~~ 232 (407)
-.++....++...++++++.+.+..+ .....+.+.+.+.++++|+.+..++.++.++
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33677888999999999999999665 4688999999999999999999999998764
No 86
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.26 E-value=0.021 Score=54.62 Aligned_cols=116 Identities=15% Similarity=0.157 Sum_probs=76.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhcccc-CCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHH
Q 015434 247 NWAGFWSAMASNLTNQSRNVLSKKVMVNKEE-ALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYV 325 (407)
Q Consensus 247 ~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~-~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (407)
...|+.+++.++++.+....++|+-..+.++ +...-. + ...++.+ ..|+
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~--------------------~----~~~~l~~------~~W~ 54 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGS--------------------G----GRSYLRR------PLWW 54 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--------------------h----hhHHHhh------HHHH
Confidence 4689999999999999999999987643322 111000 0 0001110 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHH
Q 015434 326 RSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYS 395 (407)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~ 395 (407)
.++.....+-..+ +.++...++...+-++.+..++..+++.+++||+++...+.|+.+++.|..+.-
T Consensus 55 ~G~~~~~~g~~~~---~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 55 IGLLLMVLGEILN---FVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHHHHHhcchHHH---HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 2222222222232 445566777777777889999999999999999999999999999999987643
No 87
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.23 E-value=0.021 Score=45.97 Aligned_cols=70 Identities=21% Similarity=0.271 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHh-hhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheee
Q 015434 169 LAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIK-ATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALA 239 (407)
Q Consensus 169 ~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~-~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~ 239 (407)
++..++.. ++-.+.+.+++.+...+.+.+.-+. ++.-+||++.++++.+|..++++++++.+++.|+.+.
T Consensus 42 ~~y~ipf~-lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFL-LNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 44444443 3556778889999999999998774 8999999999999988888999999999999999875
No 88
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.14 E-value=0.065 Score=48.78 Aligned_cols=66 Identities=14% Similarity=0.018 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhee
Q 015434 173 LPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVAL 238 (407)
Q Consensus 173 ~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l 238 (407)
....+..+.+..+....++|.+.....+...+.++++.+++.++++|+++..++.++.+++.|+.+
T Consensus 156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 344455677778899999999999999999999999999999999999999999999999999765
No 89
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.02 E-value=0.0054 Score=56.12 Aligned_cols=77 Identities=14% Similarity=0.305 Sum_probs=67.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhe
Q 015434 161 RPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVA 237 (407)
Q Consensus 161 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~ 237 (407)
..+..++++..++-+|++..+++++...++|.=-++-.++++++..+|..+...+|+++.|+++.|.+.++++...+
T Consensus 245 ~lP~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v 321 (346)
T KOG4510|consen 245 QLPHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTV 321 (346)
T ss_pred ecCccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHH
Confidence 33456778888888999999999999999999999999999999999999999999999999999987666555443
No 90
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=95.85 E-value=0.025 Score=52.33 Aligned_cols=132 Identities=17% Similarity=0.202 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHH
Q 015434 250 GFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLI 329 (407)
Q Consensus 250 G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (407)
|++.++.|+++++...+=.||. +.-|++..+.+++....+......++.+.+.+.+. ..+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-----~~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f~p~---------------aml 60 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-----DTGDGFFFQWVMCSGIFLVGLVVNLILGFPPFYPW---------------AML 60 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-----cCCCcHHHHHHHHHHHHHHHHHHHHhcCCCcceeH---------------HHh
Confidence 6778889999999888888865 44578877777766655555555444443333221 222
Q ss_pred HHHHHHHHHHHHHHHhhccCh-hHHhHHHHHHHHHHHHHHHH-HcCCc-----CchhHHHHHHHHHHHHHHHHHhcccc
Q 015434 330 AAICYHAYQQVSYMILQRVSP-VTHSVGNCVKRVVVIVSSVM-FFRTP-----VSAINAFGTGIALAGVFLYSRVKRIK 401 (407)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~~s~-~~~sv~~~l~~v~~iils~~-~fge~-----~s~~~~~G~~lil~G~~ly~~~~~~~ 401 (407)
+|......|....-+++.++- +-..+.+..+.+.+-..+-+ +||++ -.+.+++|++++++|..+|...|..+
T Consensus 61 gG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 61 GGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 333333333333444555543 23445666667777666654 67643 34689999999999999998765544
No 91
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.11 E-value=1.6 Score=36.96 Aligned_cols=137 Identities=13% Similarity=0.126 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCC-ChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHH
Q 015434 248 WAGFWSAMASNLTNQSRNVLSKKVMVNKEEAL-DNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVR 326 (407)
Q Consensus 248 ~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~-~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (407)
+...++++.+.++-..+....-++.+ .. +|..-.......|++.+..+....++..... .. .+ ...+.|..
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~----~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a--~~-~~-~pwW~~~G 75 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLAR----YLGSPLLASLISFLVGTVLLLILLLIKQGHPGLA--AV-AS-APWWAWIG 75 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHH----HcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchh--hc-cC-CchHHHHc
Confidence 45567777777777777777777652 22 3555556666777777776666544322111 11 11 11222333
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhHHhH-HHHHHHHHHHHHHHHHcC----CcCchhHHHHHHHHHHHHHHHHH
Q 015434 327 SLIAAICYHAYQQVSYMILQRVSPVTHSV-GNCVKRVVVIVSSVMFFR----TPVSAINAFGTGIALAGVFLYSR 396 (407)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~~s~~~~sv-~~~l~~v~~iils~~~fg----e~~s~~~~~G~~lil~G~~ly~~ 396 (407)
+ +++..+-........+.++.+.-. .-.-+.+.+.+++.+=+. .+++...++|++++++|+++..+
T Consensus 76 G----~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 76 G----LLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred c----chhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 3 222223333356678888776544 445566667777766543 56999999999999999665543
No 92
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=94.96 E-value=0.12 Score=40.29 Aligned_cols=46 Identities=22% Similarity=0.288 Sum_probs=25.9
Q ss_pred HHHhhccChhH-HhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHH
Q 015434 342 YMILQRVSPVT-HSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIA 387 (407)
Q Consensus 342 ~~~l~~~s~~~-~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~li 387 (407)
..++++.+..+ +.+..-+..+.+.+.++++|||++|..+++|+.++
T Consensus 47 ~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 47 SLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 45667766543 57777788999999999999999999999999875
No 93
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=93.53 E-value=0.24 Score=47.42 Aligned_cols=136 Identities=13% Similarity=0.039 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--C-CchHHHHHHHHHHHHHHHH-HHHHhccc--C---CC-CCHHHHHHHHHH
Q 015434 106 IEVLLLMGLWYFFNIIFNIYNKQVLKV--Y-RFPVTVTTCQFGVGTVLVL-LLWTFNLY--R---PK-VSSTQLAAILPL 175 (407)
Q Consensus 106 l~~~~~~~~~~~~~~~~~~~~K~~l~~--~-~~P~~l~~~r~~~~~~~l~-~~~~~~~~--~---~~-~~~~~~~~~~~~ 175 (407)
+........+......-+++.|.++.+ . -+++.+..++--++.+++. +.+..... . .. ...-....+...
T Consensus 162 ~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (316)
T KOG1441|consen 162 LFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLN 241 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHH
Confidence 344555666666677778888888852 1 2367777777777777776 55443221 1 10 111113334444
Q ss_pred HHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeec
Q 015434 176 ALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (407)
Q Consensus 176 g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~ 241 (407)
+++..+.|...+..+..+++-+.++....-=+++.+.++++++++.+..+.+|..+.+.|+.+...
T Consensus 242 sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 242 SVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 566677788889999999999999999888888999999999999999999999999999987543
No 94
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.46 E-value=0.21 Score=45.09 Aligned_cols=134 Identities=15% Similarity=0.131 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHhhhcccc-C---CC----hhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHHHHHHH
Q 015434 258 NLTNQSRNVLSKKVMVNKEE-A---LD----NITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLI 329 (407)
Q Consensus 258 ~~~~a~~~vl~k~~~~~~~~-~---~~----~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (407)
-+||=.|.+.++|+.+++.. + .. ...+.+.++..-.+..=.+..+..... . +......| ..
T Consensus 22 fvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~-----~---D~t~~~~Y---aA 90 (337)
T KOG1580|consen 22 FVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTE-----I---DNTPTKMY---AA 90 (337)
T ss_pred hheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeeccccc-----c---cCCcchHH---HH
Confidence 46888899999998875421 1 11 123344444443333222111111110 1 11111222 12
Q ss_pred HHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhccccc
Q 015434 330 AAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKRIKP 402 (407)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~~~~ 402 (407)
.+..+.+-..++..+++.++=-|.-+....||+-++++|+++.+..-+|....-.++|++|+.++.+.+.|..
T Consensus 91 cs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~ 163 (337)
T KOG1580|consen 91 CSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVG 163 (337)
T ss_pred HHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccC
Confidence 2333333334556777888777777888899999999999999999999999999999999999888765543
No 95
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.34 E-value=0.81 Score=43.06 Aligned_cols=133 Identities=18% Similarity=0.174 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHHhccc-CC-----CCCHHHHHHHHHHHHH
Q 015434 106 IEVLLLMGLWYFFNIIFNIYNKQVLKVYR-FPVTVTTCQFGVGTVLVLLLWTFNLY-RP-----KVSSTQLAAILPLALV 178 (407)
Q Consensus 106 l~~~~~~~~~~~~~~~~~~~~K~~l~~~~-~P~~l~~~r~~~~~~~l~~~~~~~~~-~~-----~~~~~~~~~~~~~g~l 178 (407)
+....++..+..+-...+-..+.++..+. .++-+.+.-.++.+++-......... .+ +.+++.++.++..+++
T Consensus 171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~ 250 (327)
T KOG1581|consen 171 PIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTC 250 (327)
T ss_pred hHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHh
Confidence 45566677777777777777888877654 13333333333333333333222221 11 2357789999999999
Q ss_pred HHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhee
Q 015434 179 HTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVAL 238 (407)
Q Consensus 179 ~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l 238 (407)
.+.++.+.++-++.-.+=..++|.-+-=+++++++.+..+.+.+..+|.++.++++|..+
T Consensus 251 gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 251 GAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred hhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 999999888888777766777888888899999999999999999999998877777643
No 96
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=93.20 E-value=1.9 Score=41.42 Aligned_cols=143 Identities=15% Similarity=0.185 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHH-HHHHHHHHHHHHHHH-hcCccchhhhHhhcCCchHHHHH
Q 015434 248 WAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSI-ITVMSFILMIPVTLI-MEGVTFTPAYLQSAGLNLKEVYV 325 (407)
Q Consensus 248 ~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~-~~~~~~l~l~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 325 (407)
..|+++..+++++.+.+.+=.||.. -..++.... +.+++-+ .+|.... ..-+++.+...+.+.......++
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkvk------~WsWEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l 78 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKVK------GWSWESYWLVQGIFSWL-IVPWLWALLAIPDFFSIYSATPASTLFWTFL 78 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhcC------CccHHHHHHHHHHHHHH-HHHHHHHHHhCCcHHHHHHhCChhHHHHHHH
Confidence 5799999999999999988888752 234444432 3334333 3444332 22333322222211112222222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCh-hHHhHHHHHHHHHHHHHHHHHcC-------CcCchhHHHHHHHHHHHHHHHHHh
Q 015434 326 RSLIAAICYHAYQQVSYMILQRVSP-VTHSVGNCVKRVVVIVSSVMFFR-------TPVSAINAFGTGIALAGVFLYSRV 397 (407)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~l~~~s~-~~~sv~~~l~~v~~iils~~~fg-------e~~s~~~~~G~~lil~G~~ly~~~ 397 (407)
..++=++.+..+. ..+++++- +..++..-+-.++.+++--++.| ++-....++|.+++++|+....+.
T Consensus 79 ~G~lWGIGgltfG----l~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 79 FGVLWGIGGLTFG----LAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HHHHHhcchhhHh----HHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 3333344444443 34455543 33445444555555555555543 223357899999999999987765
Q ss_pred cccc
Q 015434 398 KRIK 401 (407)
Q Consensus 398 ~~~~ 401 (407)
...|
T Consensus 155 G~~K 158 (344)
T PF06379_consen 155 GSMK 158 (344)
T ss_pred HHhh
Confidence 4433
No 97
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.03 E-value=2.9 Score=35.46 Aligned_cols=118 Identities=17% Similarity=0.172 Sum_probs=75.7
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCCCCC--HH-HHHHHHHHHHHHHHHHHHHHhhhcCcchhh
Q 015434 121 IFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVS--ST-QLAAILPLALVHTLGNLFTNMSLGKVAVSF 197 (407)
Q Consensus 121 ~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~--~~-~~~~~~~~g~l~~~~~~~~~~al~~~s~s~ 197 (407)
...-+|-.+-+....|+.-++.-+.++.+++..+...+.+.+... ++ .|+. ...|++.+.....+......+.++.
T Consensus 19 ~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~-~~GG~lGa~~vt~s~~l~p~lGa~~ 97 (150)
T COG3238 19 LQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWA-WIGGLLGAIFVTSSILLAPRLGAAT 97 (150)
T ss_pred hHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHH-HHccchhhhhhhhhHHhccchhHHH
Confidence 445566666666677999999999998888776655533333222 22 3333 3445555555555555666666666
Q ss_pred HHHH-hhhhHHHHHHHHHHH----hcCCCCHHHHHHHHHHhhhheee
Q 015434 198 THTI-KATEPFFSVLLSAMF----LGEFPTLWVVGSLIPIMGGVALA 239 (407)
Q Consensus 198 ~~~i-~~~~Pvft~lls~~~----l~er~s~~~~~~~~~~~~Gv~l~ 239 (407)
...+ .+-.-+..+++..+= -+++++..++++++++++|+.+.
T Consensus 98 t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 98 TIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 6443 355566666666542 23789999999999999995543
No 98
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=90.11 E-value=0.21 Score=45.53 Aligned_cols=72 Identities=25% Similarity=0.284 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHH----HHHHHhhhhee
Q 015434 167 TQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVG----SLIPIMGGVAL 238 (407)
Q Consensus 167 ~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~----~~~~~~~Gv~l 238 (407)
+....-+..|+.++.++.+...|-+.+.+++.--+..+..+...+.+.+++|||=+.+++. ++++++.|..+
T Consensus 207 K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~ 282 (288)
T COG4975 207 KYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL 282 (288)
T ss_pred HHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence 3334445668999999999999999999999988888899999999999999999998864 44455555443
No 99
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=89.86 E-value=1.1 Score=36.20 Aligned_cols=52 Identities=19% Similarity=0.291 Sum_probs=39.6
Q ss_pred HHHhhccChh-HHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHH
Q 015434 342 YMILQRVSPV-THSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFL 393 (407)
Q Consensus 342 ~~~l~~~s~~-~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~l 393 (407)
+..+++.+-. .+-+.|.+.-+++.+.++++.+|..+...++|+++++.|+.+
T Consensus 59 ~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 59 FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 3445555433 334567788899999998888888899999999999999753
No 100
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=89.83 E-value=0.35 Score=46.68 Aligned_cols=72 Identities=11% Similarity=0.098 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhcc
Q 015434 328 LIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVKR 399 (407)
Q Consensus 328 ~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~~ 399 (407)
+..|...++.|+..-.++++++.....++....-.++.+++.++-+|++|+..+++..+.++|+++.+..+.
T Consensus 163 l~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s 234 (416)
T KOG2765|consen 163 LFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDS 234 (416)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccc
Confidence 334444555555556778888888888888899999999999999999999999999999999887765543
No 101
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=85.95 E-value=0.4 Score=42.15 Aligned_cols=56 Identities=11% Similarity=0.243 Sum_probs=50.5
Q ss_pred HHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHh
Q 015434 342 YMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRV 397 (407)
Q Consensus 342 ~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~ 397 (407)
..++++++|..++-....+..++.+++++.+||.+....++..++.+.|+.+..+.
T Consensus 71 l~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~ 126 (290)
T KOG4314|consen 71 LLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA 126 (290)
T ss_pred HHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence 57889999999999999999999999999999999999999999999888765543
No 102
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=83.31 E-value=11 Score=36.00 Aligned_cols=125 Identities=14% Similarity=0.030 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHHhccc-------CCC-CCHHHHHHHHHHHHHHHHHHHHH
Q 015434 116 YFFNIIFNIYNKQVLKVYRF-PVTVTTCQFGVGTVLVLLLWTFNLY-------RPK-VSSTQLAAILPLALVHTLGNLFT 186 (407)
Q Consensus 116 ~~~~~~~~~~~K~~l~~~~~-P~~l~~~r~~~~~~~l~~~~~~~~~-------~~~-~~~~~~~~~~~~g~l~~~~~~~~ 186 (407)
..+........|+....-+. -+-+.++..+.....+......... .+. .+...+..+..-+++..+-.++.
T Consensus 166 ~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s 245 (314)
T KOG1444|consen 166 CLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTS 245 (314)
T ss_pred HHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHH
Confidence 33344444555665553221 2445566666665555544432221 111 11223444445555566668999
Q ss_pred HhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeee
Q 015434 187 NMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALAS 240 (407)
Q Consensus 187 ~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~ 240 (407)
..+.+..++.+.++.....-..+.+...++.+++.++..++++.+.+.|-++..
T Consensus 246 ~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 246 FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS 299 (314)
T ss_pred HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence 999999999999988877777777777777888888888888888777766544
No 103
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=82.49 E-value=10 Score=30.96 Aligned_cols=42 Identities=10% Similarity=0.250 Sum_probs=33.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHH
Q 015434 102 LSRKIEVLLLMGLWYFFNIIFNIYNKQVLKVY-RFPVTVTTCQ 143 (407)
Q Consensus 102 ~~~~l~~~~~~~~~~~~~~~~~~~~K~~l~~~-~~P~~l~~~r 143 (407)
.++.+.+.++++++.+.+++..++-|.++..+ +||++++-+.
T Consensus 52 ~ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlT 94 (130)
T PF08627_consen 52 SKENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLT 94 (130)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhc
Confidence 35678888888888888888888888888875 5788777553
No 104
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=82.34 E-value=20 Score=32.43 Aligned_cols=98 Identities=10% Similarity=0.018 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcc-cCC-----CCCHHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHH
Q 015434 137 VTVTTCQFGVGTVLVLLLWTFNL-YRP-----KVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSV 210 (407)
Q Consensus 137 ~~l~~~r~~~~~~~l~~~~~~~~-~~~-----~~~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~ 210 (407)
+--.++..+.+..+++.+-+... ..+ .++.+....+++-|++..+..++.-+++.-++...+++..++.-....
T Consensus 186 ~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~a 265 (309)
T COG5070 186 FDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIA 265 (309)
T ss_pred hhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHH
Confidence 34556777776666554433221 111 233445667778888888888999999999999999999999988888
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHhh
Q 015434 211 LLSAMFLGEFPTLWVVGSLIPIMG 234 (407)
Q Consensus 211 lls~~~l~er~s~~~~~~~~~~~~ 234 (407)
+.+.++++|..+...+.+++++..
T Consensus 266 laGlvffdap~nf~si~sillGfl 289 (309)
T COG5070 266 LAGLVFFDAPVNFLSIFSILLGFL 289 (309)
T ss_pred HhhhhhcCCchhHHHHHHHHHHHH
Confidence 888899999888888877665443
No 105
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.00 E-value=0.74 Score=43.65 Aligned_cols=118 Identities=14% Similarity=0.187 Sum_probs=71.5
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHHHHHHHHHHHHHHhcCccchhhhHhhcCCchHHHH
Q 015434 245 SFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVY 324 (407)
Q Consensus 245 ~~~~~G~~~~l~s~~~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (407)
..+..|.++++.+.+.-+...++.||-..+.+. .. .-.++.+. .++. ...|
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~-----------------~ra~~gg~--~yl~------~~~W 67 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SG-----------------LRAGEGGY--GYLK------EPLW 67 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHHHhh----hc-----------------ccccCCCc--chhh------hHHH
Confidence 345689999999999999988888876532110 00 00000001 1111 0112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHH
Q 015434 325 VRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLY 394 (407)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly 394 (407)
+.+++....+=..|+++| ...++.-..-++.+..+...+++.++++|+++....+|+.++++|....
T Consensus 68 w~G~ltm~vGei~NFaAY---aFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~i 134 (335)
T KOG2922|consen 68 WAGMLTMIVGEIANFAAY---AFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTI 134 (335)
T ss_pred HHHHHHHHHHhHhhHHHH---hhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEE
Confidence 233333333333333222 3344444455566888999999999999999999999999999997543
No 106
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=77.61 E-value=31 Score=27.29 Aligned_cols=55 Identities=15% Similarity=0.179 Sum_probs=36.8
Q ss_pred HHHhhhcCcchhhHHHHh-hhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheee
Q 015434 185 FTNMSLGKVAVSFTHTIK-ATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALA 239 (407)
Q Consensus 185 ~~~~al~~~s~s~~~~i~-~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~ 239 (407)
.+-.|.+.-+.+.--+++ ..+...-+.++.+++||++++....+-+++++++.++
T Consensus 51 ANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 51 ANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred chhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 344455554444444444 2333344566788999999999999999998887664
No 107
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=74.55 E-value=1.7 Score=40.44 Aligned_cols=52 Identities=15% Similarity=0.147 Sum_probs=46.9
Q ss_pred HHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHH
Q 015434 342 YMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFL 393 (407)
Q Consensus 342 ~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~l 393 (407)
..++++++...+-+...+..++++++++++++++-+..-..|+.+++.|..+
T Consensus 120 nlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l 171 (347)
T KOG1442|consen 120 NLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL 171 (347)
T ss_pred ceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee
Confidence 5788999999999999999999999999999999999888888888888654
No 108
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=74.26 E-value=88 Score=30.35 Aligned_cols=232 Identities=13% Similarity=0.142 Sum_probs=125.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHh-hhhHHHHHHHHHHHhc-------CCCCHHHHHHHHHHhhhh
Q 015434 165 SSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIK-ATEPFFSVLLSAMFLG-------EFPTLWVVGSLIPIMGGV 236 (407)
Q Consensus 165 ~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~-~~~Pvft~lls~~~l~-------er~s~~~~~~~~~~~~Gv 236 (407)
+.+.....+..|++...+.+.+-.+.+|+.++..+-+. .++-++=.++-.++.+ ++-....++++++.++|+
T Consensus 69 ~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGI 148 (344)
T PF06379_consen 69 PASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGI 148 (344)
T ss_pred ChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHH
Confidence 44567777888999999999999999998888775433 4444444444444433 233456789999999999
Q ss_pred eeeeccc-----------cccc-HHHHHHHHHHHHHHHHHHHHHHHhhh--c--cccCCChhHH----HHHHHHHHHHHH
Q 015434 237 ALASVTE-----------VSFN-WAGFWSAMASNLTNQSRNVLSKKVMV--N--KEEALDNITL----FSIITVMSFILM 296 (407)
Q Consensus 237 ~l~~~~~-----------~~~~-~~G~~~~l~s~~~~a~~~vl~k~~~~--~--~~~~~~~~~l----~~~~~~~~~l~l 296 (407)
++....+ .+++ ..|.+.++++.+..|+.++-.+.-.. + .....+++.. ......-+++.-
T Consensus 149 ai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN 228 (344)
T PF06379_consen 149 AICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITN 228 (344)
T ss_pred HHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHH
Confidence 9876421 1122 47999999999999988875542110 0 0012233211 111122223333
Q ss_pred HHHHHHhcC--ccch-hhhHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhc----cChhHHhHHHHHHHHHHHHHHH
Q 015434 297 IPVTLIMEG--VTFT-PAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQR----VSPVTHSVGNCVKRVVVIVSSV 369 (407)
Q Consensus 297 ~p~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~s~~~~sv~~~l~~v~~iils~ 369 (407)
+..+++... .... ..+..........-++...+.++..+......-+.-.+ ....-..+.+.+..+++.+.+.
T Consensus 229 ~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl 308 (344)
T PF06379_consen 229 LIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGL 308 (344)
T ss_pred HHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHH
Confidence 344433211 1010 00000011111122233333343333222211122222 3355667788888888888887
Q ss_pred HHc-----CCcCchhHHHHHHHHHHHHHHHHH
Q 015434 370 MFF-----RTPVSAINAFGTGIALAGVFLYSR 396 (407)
Q Consensus 370 ~~f-----ge~~s~~~~~G~~lil~G~~ly~~ 396 (407)
++- +.+.-..-++|+++++.++.+..+
T Consensus 309 ~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 309 ILKEWKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred HHHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 654 123335678898888888776543
No 109
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=71.29 E-value=10 Score=35.51 Aligned_cols=54 Identities=17% Similarity=0.191 Sum_probs=45.1
Q ss_pred HHHhhccChhHHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHH
Q 015434 342 YMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYS 395 (407)
Q Consensus 342 ~~~l~~~s~~~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~ 395 (407)
+..+..+++..+.+..-...+++-+++.-+++.+++..+|+|+..+.+|+....
T Consensus 104 ~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg 157 (372)
T KOG3912|consen 104 YVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG 157 (372)
T ss_pred HHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee
Confidence 344566777777777777789999999999999999999999999999987543
No 110
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=69.73 E-value=39 Score=26.79 Aligned_cols=46 Identities=15% Similarity=0.041 Sum_probs=39.2
Q ss_pred HhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhc
Q 015434 353 HSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVK 398 (407)
Q Consensus 353 ~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~ 398 (407)
++..+-+-.+.+.+.++.+-|++++...++|..++++|+.+..+..
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 5566667789999999999999999999999999999988765443
No 111
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=68.73 E-value=9.3 Score=30.11 Aligned_cols=70 Identities=14% Similarity=0.177 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcchhhHH-HHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheee
Q 015434 169 LAAILPLALVHTLGNLFTNMSLGKVAVSFTH-TIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALA 239 (407)
Q Consensus 169 ~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~-~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~ 239 (407)
+...+|..+ .-.+..+++.-++..+.+.+. +-.+++-.|+.+.+..+..|....+.+++..+++.|..+.
T Consensus 53 w~Y~iPFll-NqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 53 WEYLIPFLL-NQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHH-HHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 344445443 445567788888898888875 4457788899999988877788888899999999997654
No 112
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=68.01 E-value=59 Score=25.75 Aligned_cols=29 Identities=17% Similarity=0.225 Sum_probs=25.3
Q ss_pred HHHHHHHcCCcCchhHHHHHHHHHHHHHH
Q 015434 365 IVSSVMFFRTPVSAINAFGTGIALAGVFL 393 (407)
Q Consensus 365 iils~~~fge~~s~~~~~G~~lil~G~~l 393 (407)
+.++++++||++++..+.|.++++++++.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 56788999999999999999999888653
No 113
>PRK02237 hypothetical protein; Provisional
Probab=65.94 E-value=66 Score=25.59 Aligned_cols=46 Identities=11% Similarity=-0.027 Sum_probs=38.9
Q ss_pred HhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHhc
Q 015434 353 HSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRVK 398 (407)
Q Consensus 353 ~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~~ 398 (407)
++..+-+-.+.+++.++.+-|++++...++|..++++|+.+..+..
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 5566667788899999999999999999999999999987765443
No 114
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=64.28 E-value=58 Score=30.57 Aligned_cols=78 Identities=17% Similarity=0.142 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeeccc
Q 015434 166 STQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE 243 (407)
Q Consensus 166 ~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~ 243 (407)
.+.....+..+....+++.+...=.+--.+.++.++...---.|.+++++++.+.++..-.-+.++++.|..+=...+
T Consensus 257 ~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 257 VRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 444555555555544443333222233455566666666667889999999999999999999999999998876655
No 115
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=59.36 E-value=15 Score=29.12 Aligned_cols=39 Identities=21% Similarity=0.110 Sum_probs=32.6
Q ss_pred hhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecc
Q 015434 204 TEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT 242 (407)
Q Consensus 204 ~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~ 242 (407)
...+...+-.+.+.|+||+++++++..++++|+.++...
T Consensus 66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 445566777888899999999999999999999887653
No 116
>PRK02237 hypothetical protein; Provisional
Probab=59.28 E-value=15 Score=29.23 Aligned_cols=39 Identities=18% Similarity=0.022 Sum_probs=31.8
Q ss_pred hhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecc
Q 015434 204 TEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT 242 (407)
Q Consensus 204 ~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~ 242 (407)
...+...+-.+.+.++||+++++++..++++|+.++...
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 345556677888899999999999999999999876543
No 117
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=57.96 E-value=62 Score=30.48 Aligned_cols=138 Identities=14% Similarity=0.145 Sum_probs=70.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHH-------HHhcccCCCCCHHHHHHHHH
Q 015434 103 SRKIEVLLLMGLWYFFNIIFNIYNKQVLKVY-RFPVTVTTCQFGVGTVLVLLL-------WTFNLYRPKVSSTQLAAILP 174 (407)
Q Consensus 103 ~~~l~~~~~~~~~~~~~~~~~~~~K~~l~~~-~~P~~l~~~r~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~ 174 (407)
.++........+-...+..+.++++..++++ .++-...++.-+....+.+++ +..-...++.--......+|
T Consensus 160 ~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP 239 (330)
T KOG1583|consen 160 FWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVP 239 (330)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCcccc
Confidence 3344444444444556677888899888874 556555555333332222211 00000011000000001134
Q ss_pred HHHHHHHHHH-HHHhhhcC-------cchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeee
Q 015434 175 LALVHTLGNL-FTNMSLGK-------VAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALAS 240 (407)
Q Consensus 175 ~g~l~~~~~~-~~~~al~~-------~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~ 240 (407)
....+.+.+. ..+.+.+. ++.=+.++...+--++..+++.+.++..++++.|+|..++.+|..+..
T Consensus 240 ~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 240 SMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 4444433322 22222222 223333445556667888888888888999999999888888887754
No 118
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=51.97 E-value=38 Score=26.36 Aligned_cols=30 Identities=17% Similarity=0.333 Sum_probs=26.0
Q ss_pred HHHHHHHcCCcCchhHHHHHHHHHHHHHHH
Q 015434 365 IVSSVMFFRTPVSAINAFGTGIALAGVFLY 394 (407)
Q Consensus 365 iils~~~fge~~s~~~~~G~~lil~G~~ly 394 (407)
..+++++++|++.+..+.|..+++.|+...
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 446889999999999999999999887654
No 119
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=49.43 E-value=31 Score=27.17 Aligned_cols=39 Identities=15% Similarity=-0.053 Sum_probs=31.6
Q ss_pred hhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecc
Q 015434 204 TEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT 242 (407)
Q Consensus 204 ~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~ 242 (407)
...+...+-.++.-+.+++++++++..++++|+.++..+
T Consensus 67 vyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 67 VYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred hHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 344556666777889999999999999999999887654
No 120
>KOG2322 consensus N-methyl-D-aspartate receptor glutamate-binding subunit [Signal transduction mechanisms]
Probab=48.22 E-value=85 Score=28.69 Aligned_cols=8 Identities=13% Similarity=0.434 Sum_probs=3.9
Q ss_pred HHHHHHHH
Q 015434 172 ILPLALVH 179 (407)
Q Consensus 172 ~~~~g~l~ 179 (407)
++.++++.
T Consensus 114 ~ilL~iFT 121 (237)
T KOG2322|consen 114 LILLGIFT 121 (237)
T ss_pred HhHHHHHH
Confidence 45555443
No 121
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=35.98 E-value=2.4e+02 Score=26.38 Aligned_cols=23 Identities=22% Similarity=0.264 Sum_probs=12.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHhc
Q 015434 376 VSAINAFGTGIALAGVFLYSRVK 398 (407)
Q Consensus 376 ~s~~~~~G~~lil~G~~ly~~~~ 398 (407)
.+..+++|..+.+.-.+.|.+.+
T Consensus 237 v~lGNivGG~v~vgl~Y~~~~~~ 259 (265)
T COG2116 237 VTLGNIVGGAVFVGLMYWYLYRK 259 (265)
T ss_pred HHHhchhcchhhhhHHHHHhccc
Confidence 34456667666654444444433
No 122
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=35.70 E-value=3.7e+02 Score=25.04 Aligned_cols=101 Identities=7% Similarity=-0.050 Sum_probs=62.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHH-H
Q 015434 135 FPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLL-S 213 (407)
Q Consensus 135 ~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~ll-s 213 (407)
++++.-++.+....+.-.+....+. .|+. ...-++.|.+++.++.+..-..+.+..+....+=++.-+.+--. +
T Consensus 26 Dg~~fQw~~~~~i~~~g~~v~~~~~-~p~f----~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~g 100 (254)
T PF07857_consen 26 DGFFFQWVMCSGIFLVGLVVNLILG-FPPF----YPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASG 100 (254)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhcC-CCcc----eeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 3566656555555444444433332 2222 23334567889999999999999999999988887644333322 2
Q ss_pred HH-Hhc---C--CCCHHHHHHHHHHhhhheeee
Q 015434 214 AM-FLG---E--FPTLWVVGSLIPIMGGVALAS 240 (407)
Q Consensus 214 ~~-~l~---e--r~s~~~~~~~~~~~~Gv~l~~ 240 (407)
.+ +++ | +-++..+++++++++|..+..
T Consensus 101 rfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~ 133 (254)
T PF07857_consen 101 RFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFS 133 (254)
T ss_pred hceeccccccccchhHHHHHHHHHHHHHHHhee
Confidence 21 222 2 346677889999888887754
No 123
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=32.96 E-value=5.5e+02 Score=26.24 Aligned_cols=65 Identities=9% Similarity=0.117 Sum_probs=35.9
Q ss_pred hhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhe---eeecccccccHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015434 202 KATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVA---LASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVM 272 (407)
Q Consensus 202 ~~~~Pvft~lls~~~l~er~s~~~~~~~~~~~~Gv~---l~~~~~~~~~~~G~~~~l~s~~~~a~~~vl~k~~~ 272 (407)
+..-.++-.+++++++.+-.+ .+..++++. ....+..+....+++..+.+.++.-+...++||+-
T Consensus 278 ~~~~~~~~fLia~~l~~dg~~------ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g 345 (477)
T PF11700_consen 278 RKLRQLFLFLIAYFLYSDGVN------TIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFG 345 (477)
T ss_pred HhChHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344667778888888664322 222222222 22223333345666666666666666667777764
No 124
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=31.81 E-value=2.6e+02 Score=22.15 Aligned_cols=45 Identities=16% Similarity=-0.016 Sum_probs=35.3
Q ss_pred HhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHHHHHh
Q 015434 353 HSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFLYSRV 397 (407)
Q Consensus 353 ~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~ly~~~ 397 (407)
++-.+-+-.+.+.+..++.=|..++...++|..+.++|+.+..+.
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 344444667788888888889999999999999999997655443
No 125
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.71 E-value=2.7e+02 Score=21.75 Aligned_cols=32 Identities=22% Similarity=0.200 Sum_probs=26.8
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHhhhheeee
Q 015434 209 SVLLSAMFLGEFPTLWVVGSLIPIMGGVALAS 240 (407)
Q Consensus 209 t~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~ 240 (407)
-..++.+++||.+.+..+.+-.++.+|+.++.
T Consensus 83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 34578889999999999999999998887653
No 126
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=28.69 E-value=4.2e+02 Score=23.54 Aligned_cols=9 Identities=11% Similarity=0.161 Sum_probs=4.3
Q ss_pred HHHhcCCCC
Q 015434 214 AMFLGEFPT 222 (407)
Q Consensus 214 ~~~l~er~s 222 (407)
..++|+|++
T Consensus 194 ~~~lkkk~~ 202 (206)
T PF06570_consen 194 RFYLKKKYN 202 (206)
T ss_pred HHHHHHHhC
Confidence 344555554
No 127
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=28.36 E-value=6.3e+02 Score=25.52 Aligned_cols=112 Identities=10% Similarity=0.106 Sum_probs=0.0
Q ss_pred cccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHH
Q 015434 96 EHQTTELSRKIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPL 175 (407)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 175 (407)
...+-+.-+++.++++.+++|..-..++ -+-++..+.+=...+.+.+..+..... .+...+.+...
T Consensus 319 ~~~~iHpiQY~LVGlAl~lFYlLLLSlS---------Ehi~F~~AYliAa~a~i~Li~~Y~~~v-----l~~~k~~~~~~ 384 (430)
T PF06123_consen 319 SKLRIHPIQYLLVGLALVLFYLLLLSLS---------EHIGFNLAYLIAALACIGLISLYLSSV-----LKSWKRGLIFA 384 (430)
T ss_pred hcCcccHHHHHHHHHHHHHHHHHHHHHH---------hhhchHHHHHHHHHHHHHHHHHHHHHH-----HhcchHHHHHH
Q ss_pred HHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHH
Q 015434 176 ALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWV 225 (407)
Q Consensus 176 g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~ 225 (407)
+.+.++..+++.. +..-.++++..+.-+|.++...+++.+|.+|.+
T Consensus 385 ~~L~~LY~~Ly~l----Lq~EdyALL~GSl~LF~iLa~vM~~TRkiDWy~ 430 (430)
T PF06123_consen 385 GLLAALYGFLYVL----LQSEDYALLMGSLLLFIILALVMYLTRKIDWYA 430 (430)
T ss_pred HHHHHHHHHHHHH----HHhhhHHHHHHHHHHHHHHHHHHheeecccccC
No 128
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=28.21 E-value=3.9e+02 Score=23.04 Aligned_cols=61 Identities=18% Similarity=0.093 Sum_probs=39.7
Q ss_pred HHHHHhcCCCCHHHHHHHHH-------HhhhheeeecccccccHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015434 212 LSAMFLGEFPTLWVVGSLIP-------IMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVM 272 (407)
Q Consensus 212 ls~~~l~er~s~~~~~~~~~-------~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~vl~k~~~ 272 (407)
.+.++.|..|+..+.+++.+ .+.|+++....+.+.-.-.++.++.+++.+++-.++..-+.
T Consensus 88 ~Em~v~KtsP~LYr~LGIfLPLITTNCaVLgvaLln~~~~~~f~qsv~~gf~a~lGfslvmvlfA~iR 155 (193)
T COG4657 88 TEMVVRKTSPTLYRLLGIFLPLITTNCAVLGVALLNINEGHNFLQSVVYGFGAALGFSLVMVLFAAIR 155 (193)
T ss_pred HHHHHHccCHHHHHHHHHhhhhHhhchHHHHHHHHHhhhhhhHHHHHHHHhhhHhhHHHHHHHHHHHH
Confidence 34445555666666665543 45688877766655545577778888888888877765543
No 129
>PRK02935 hypothetical protein; Provisional
Probab=27.23 E-value=2.2e+02 Score=22.52 Aligned_cols=23 Identities=13% Similarity=0.159 Sum_probs=16.4
Q ss_pred chhHHHHHHHHHHHHHHHHHhcc
Q 015434 377 SAINAFGTGIALAGVFLYSRVKR 399 (407)
Q Consensus 377 s~~~~~G~~lil~G~~ly~~~~~ 399 (407)
+...++|.+.++++.++|-+...
T Consensus 41 ~ifm~~G~l~~l~S~vvYFwiGm 63 (110)
T PRK02935 41 TIFMLLGFLAVIASTVVYFWIGM 63 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 34456788888888888876543
No 130
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=26.33 E-value=6.5e+02 Score=24.98 Aligned_cols=84 Identities=10% Similarity=0.065 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHhhhheeeecccccccH-HHHHHHHHH-HHHHHHHHHHHHHhhhccccCCChhHH
Q 015434 207 FFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNW-AGFWSAMAS-NLTNQSRNVLSKKVMVNKEEALDNITL 284 (407)
Q Consensus 207 vft~lls~~~l~er~s~~~~~~~~~~~~Gv~l~~~~~~~~~~-~G~~~~l~s-~~~~a~~~vl~k~~~~~~~~~~~~~~l 284 (407)
+...++++ +.++|++......- .++|.+-++....-.++ ..++.++++ .+++-....+.+|+. -++..|...+
T Consensus 236 l~~~~~~~-~~~gk~~~~~~~nG--~laGlVaita~~~~v~p~~A~~iG~iag~i~~~~~~~l~~~~~--iDD~~~~~~v 310 (399)
T PF00909_consen 236 LTWLLISY-LLSGKWSMVGICNG--ALAGLVAITAGAGYVTPWGALLIGAIAGLISYFGVSWLLKRLK--IDDPVGAFAV 310 (399)
T ss_dssp HHHHHHHH-HHCSS--HHHHHHH--HHHHHHHHTTTTTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHT--S-HTTGHHHH
T ss_pred HHHHHhhh-ccccccchhhhhhh--hhhhhhheecccCCCcHHHHHHhhhhHhhhhhhheecccceeE--eccccceEee
Confidence 33344444 34466665554321 22333333323222333 344555555 344444443444442 2234455544
Q ss_pred HHHHHHHHHHH
Q 015434 285 FSIITVMSFIL 295 (407)
Q Consensus 285 ~~~~~~~~~l~ 295 (407)
-....+.|.+.
T Consensus 311 Hg~~Gi~G~i~ 321 (399)
T PF00909_consen 311 HGVGGIWGTIL 321 (399)
T ss_dssp CHHHHHHHHHH
T ss_pred eeccHHHHHHH
Confidence 45555555553
No 131
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=26.19 E-value=22 Score=33.25 Aligned_cols=44 Identities=11% Similarity=-0.046 Sum_probs=0.0
Q ss_pred cCCCCHHHHHHHHHHhhhheeeeccc--ccccHHHHHHHHHHHHHH
Q 015434 218 GEFPTLWVVGSLIPIMGGVALASVTE--VSFNWAGFWSAMASNLTN 261 (407)
Q Consensus 218 ~er~s~~~~~~~~~~~~Gv~l~~~~~--~~~~~~G~~~~l~s~~~~ 261 (407)
++-+-..-.++++++++-..++..-. .+.-+.|+++.++..+..
T Consensus 74 RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLa 119 (381)
T PF05297_consen 74 RRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLA 119 (381)
T ss_dssp ----------------------------------------------
T ss_pred HhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 33344455566666666555544332 223356766655544433
No 132
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=26.07 E-value=1.7e+02 Score=23.29 Aligned_cols=52 Identities=15% Similarity=0.260 Sum_probs=34.3
Q ss_pred HHHhhccChh-HHhHHHHHHHHHHHHHHHHHcCCcCchhHHHHHHHHHHHHHH
Q 015434 342 YMILQRVSPV-THSVGNCVKRVVVIVSSVMFFRTPVSAINAFGTGIALAGVFL 393 (407)
Q Consensus 342 ~~~l~~~s~~-~~sv~~~l~~v~~iils~~~fge~~s~~~~~G~~lil~G~~l 393 (407)
|+.+++.+-. .+-+.+.+.-.++.+.|..+-.|......++|..++++|+.+
T Consensus 70 ~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 70 YLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred HHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 3444444422 223455566777788887655556677889999999999865
No 133
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=25.40 E-value=92 Score=23.63 Aligned_cols=26 Identities=19% Similarity=0.094 Sum_probs=20.0
Q ss_pred cCchhHHHHHHHHHHHHHHHHHhccc
Q 015434 375 PVSAINAFGTGIALAGVFLYSRVKRI 400 (407)
Q Consensus 375 ~~s~~~~~G~~lil~G~~ly~~~~~~ 400 (407)
.+++..++|++++++|..+|.....+
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~~ 29 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFFR 29 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 46778889999999998888754433
No 134
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=23.77 E-value=65 Score=21.56 Aligned_cols=19 Identities=16% Similarity=0.195 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHhccccc
Q 015434 384 TGIALAGVFLYSRVKRIKP 402 (407)
Q Consensus 384 ~~lil~G~~ly~~~~~~~~ 402 (407)
..++++|+++|.+.+++++
T Consensus 19 ~~~~Figiv~wa~~p~~k~ 37 (48)
T cd01324 19 LALFFLGVVVWAFRPGRKK 37 (48)
T ss_pred HHHHHHHHHHHHhCCCcch
Confidence 4677889999988776554
No 135
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=21.94 E-value=2.6e+02 Score=23.60 Aligned_cols=11 Identities=18% Similarity=0.501 Sum_probs=6.2
Q ss_pred HHHHHcCCcCc
Q 015434 367 SSVMFFRTPVS 377 (407)
Q Consensus 367 ls~~~fge~~s 377 (407)
.++++++|.+.
T Consensus 96 a~~L~~~e~~~ 106 (150)
T COG3086 96 AQYLFFSELIV 106 (150)
T ss_pred HHHHhhhhHHH
Confidence 45556666544
No 136
>PRK11715 inner membrane protein; Provisional
Probab=21.83 E-value=8.5e+02 Score=24.70 Aligned_cols=112 Identities=14% Similarity=0.140 Sum_probs=0.0
Q ss_pred cccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHH
Q 015434 96 EHQTTELSRKIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPL 175 (407)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~K~~l~~~~~P~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 175 (407)
...+-+.-+++.++++.+++|..-..++ -+-++..+.+=...+.+.+...+.... .+...+.....
T Consensus 325 ~~~~iHpiQYlLVGlAl~lFYLLLLSlS---------EHigF~~AYliAa~a~v~li~~Y~~~v-----l~~~k~g~~~~ 390 (436)
T PRK11715 325 KKLRIHPVQYLLVGLALVLFYLLLLSLS---------EHIGFTLAYLIAALACVLLIGFYLSAV-----LRSWKRGLLFA 390 (436)
T ss_pred cCceecHHHHHHHHHHHHHHHHHHHHHH---------hhhchHHHHHHHHHHHHHHHHHHHHHH-----HhcchHHHHHH
Q ss_pred HHHHHHHHHHHHhhhcCcchhhHHHHhhhhHHHHHHHHHHHhcCCCCHHH
Q 015434 176 ALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWV 225 (407)
Q Consensus 176 g~l~~~~~~~~~~al~~~s~s~~~~i~~~~Pvft~lls~~~l~er~s~~~ 225 (407)
+.+.++..+++.. +..-.++++..+.-+|.++....++.+|.+|..
T Consensus 391 ~~L~~LYg~Ly~l----Lq~EDyALL~GSllLF~~La~vM~~TR~iDWy~ 436 (436)
T PRK11715 391 AALAALYGVLYGL----LQSEDYALLLGSLLLFAVLALVMFLTRRIDWYA 436 (436)
T ss_pred HHHHHHHHHHHHH----HHHhHHHHHHHHHHHHHHHHHHHheeecccccC
No 137
>PRK10447 HflBKC-binding inner membrane protein; Provisional
Probab=21.68 E-value=6.1e+02 Score=22.99 Aligned_cols=20 Identities=5% Similarity=-0.091 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 015434 249 AGFWSAMASNLTNQSRNVLS 268 (407)
Q Consensus 249 ~G~~~~l~s~~~~a~~~vl~ 268 (407)
.......++.+.++.+.++-
T Consensus 160 ~~~~~s~~g~llfsgyilyD 179 (219)
T PRK10447 160 LHLAISAVFILISSGAILFE 179 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444455566666666654
No 138
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=21.09 E-value=63 Score=20.79 Aligned_cols=17 Identities=35% Similarity=0.601 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHhcc
Q 015434 383 GTGIALAGVFLYSRVKR 399 (407)
Q Consensus 383 G~~lil~G~~ly~~~~~ 399 (407)
|.+++++|.++|.++++
T Consensus 22 ~vI~~vl~~~l~~~~rR 38 (40)
T PF08693_consen 22 GVIIIVLGAFLFFWYRR 38 (40)
T ss_pred HHHHHHHHHHhheEEec
Confidence 45556666666655444
No 139
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=20.70 E-value=3.8e+02 Score=20.18 Aligned_cols=56 Identities=5% Similarity=0.252 Sum_probs=29.7
Q ss_pred chhhhhhHHH-HHHHHHHHHHHHHH-HHHHHHHHh----cCCchHHHHHHHHHHHHHHHHHH
Q 015434 99 TTELSRKIEV-LLLMGLWYFFNIIF-NIYNKQVLK----VYRFPVTVTTCQFGVGTVLVLLL 154 (407)
Q Consensus 99 ~~~~~~~l~~-~~~~~~~~~~~~~~-~~~~K~~l~----~~~~P~~l~~~r~~~~~~~l~~~ 154 (407)
+..+++.+.+ ..+.++|...+.+. .++...+-+ .+|..+.++.--.....++++..
T Consensus 4 ~~yWr~n~rl~~~lL~iW~vvsfg~~~lfa~~Ln~~~~~GfPlgfw~aaQGsi~~fviLi~~ 65 (81)
T PF13937_consen 4 RAYWRKNLRLIAILLAIWFVVSFGVGILFADELNQITFGGFPLGFWFAAQGSIIVFVILIFV 65 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeCCCChHHHHHHHhHHHHHHHHHHH
Confidence 4455555444 44466788777777 555554422 24444555554444444444443
Done!