BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015435
(407 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|7AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|7AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|A Chain A, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|B Chain B, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|1TAR|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAR|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1OXO|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1OXO|B Chain B, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1IVR|A Chain A, Structure Of Aspartate Aminotransferase
pdb|1AMA|A Chain A, Domain Closure In Mitochondrial Aspartate Aminotransferase
pdb|1MAP|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1MAQ|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1OXP|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Closed
Conformation
Length = 401
Score = 459 bits (1180), Expect = e-129, Method: Compositional matrix adjust.
Identities = 216/397 (54%), Positives = 282/397 (71%), Gaps = 2/397 (0%)
Query: 5 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVND 64
S + + P DPILGVT A+ +DT+ K+NLGVGAYR + GKP VLN VRKAE ++
Sbjct: 2 SWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAK 61
Query: 65 QSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY 124
+ KEYLPI GL DF + SA+L LG +S A K R TVQ +SGTGSLRVGA FL R +
Sbjct: 62 KMD-KEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFF 120
Query: 125 H-QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 183
+Y+P+P+WGNH +F AGL ++ YRYYDP T L+F G +ED+ P +I+LL
Sbjct: 121 KFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILL 180
Query: 184 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGG 243
HACAHNPTGVDP EQW+++ +++ + LL +FD AYQGFASG ++ DA ++R F+ G
Sbjct: 181 HACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGI 240
Query: 244 ECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVAT 303
+ +++QSYAKNMGLYGER GA +++C+ + A RVESQLK++IRPMYS+PP++GA I +
Sbjct: 241 DVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASL 300
Query: 304 ILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSE 363
IL + KEW +E+K MADRIISMR QL L G+ +W HI QIGMF FTGL E
Sbjct: 301 ILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPE 360
Query: 364 QVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIH 400
QV +TKE+ IYMT DGRIS+AG++S V +L AIH
Sbjct: 361 QVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIH 397
>pdb|1AKA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate- Binding Lysine Residue
Length = 401
Score = 456 bits (1174), Expect = e-129, Method: Compositional matrix adjust.
Identities = 215/397 (54%), Positives = 281/397 (70%), Gaps = 2/397 (0%)
Query: 5 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVND 64
S + + P DPILGVT A+ +DT+ K+NLGVGAYR + GKP VLN VRKAE ++
Sbjct: 2 SWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAK 61
Query: 65 QSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY 124
+ KEYLPI GL DF + SA+L LG +S A K R TVQ +SGTGSLRVGA FL R +
Sbjct: 62 KMD-KEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFF 120
Query: 125 H-QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 183
+Y+P+P+WGNH +F AGL ++ YRYYDP T L+F G +ED+ P +I+LL
Sbjct: 121 KFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILL 180
Query: 184 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGG 243
HACAHNPTGVDP EQW+++ +++ + LL +FD AYQGFASG ++ DA ++R F+ G
Sbjct: 181 HACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGI 240
Query: 244 ECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVAT 303
+ +++QSYA NMGLYGER GA +++C+ + A RVESQLK++IRPMYS+PP++GA I +
Sbjct: 241 DVVLSQSYAHNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASL 300
Query: 304 ILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSE 363
IL + KEW +E+K MADRIISMR QL L G+ +W HI QIGMF FTGL E
Sbjct: 301 ILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPE 360
Query: 364 QVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIH 400
QV +TKE+ IYMT DGRIS+AG++S V +L AIH
Sbjct: 361 QVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIH 397
>pdb|3PD6|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 447 bits (1151), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/389 (55%), Positives = 274/389 (70%), Gaps = 2/389 (0%)
Query: 13 APEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYL 72
P DPILGVT A+ +DT+ K+NLGVGAYR + GKP VL VRKAE + ++ KEYL
Sbjct: 10 GPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYL 68
Query: 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-QLTIYI 131
PI GL +F K SA+L LG ++ +K R TVQ +SGTG+LRVGA FL R + +++
Sbjct: 69 PIGGLAEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFL 128
Query: 132 PQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPT 191
P+P+WGNH +F AG+ ++ YRYYDP T G +F G LED+ P +++LLHACAHNPT
Sbjct: 129 PKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHNPT 188
Query: 192 GVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSY 251
GVDP EQW++I +++ K L FFD AYQGFASG D DA +VR F+ G + QSY
Sbjct: 189 GVDPRPEQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSY 248
Query: 252 AKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMY 311
AKNMGLYGERVGA ++VCK + A RVESQLK++IRP+YS+PP++GA I ATIL +
Sbjct: 249 AKNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPLYSNPPLNGARIAATILTSPDLR 308
Query: 312 KEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKE 371
K+W E+K MADRIISMR QL L G+ +W HI QIGMF FTGL EQV +TKE
Sbjct: 309 KQWLQEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKE 368
Query: 372 YHIYMTSDGRISMAGLSSKTVPHLTDAIH 400
+ +YMT DGRIS+AG++S V +L AIH
Sbjct: 369 FSVYMTKDGRISVAGVTSGNVGYLAHAIH 397
>pdb|3HLM|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3PD6|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/389 (55%), Positives = 273/389 (70%), Gaps = 2/389 (0%)
Query: 13 APEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYL 72
P DPILGVT A+ +DT+ K+NLGVGAYR + GKP VL VRKAE + ++ KEYL
Sbjct: 10 GPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAA-KNLDKEYL 68
Query: 73 PIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-QLTIYI 131
PI GL +F K SA+L LG ++ +K R TVQ +SGTG+LRVGA FL R + +++
Sbjct: 69 PIGGLAEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFL 128
Query: 132 PQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPT 191
P+P+WGNH +F AG+ ++ YRYYDP T G +F G LED+ P +++LLHACAHNPT
Sbjct: 129 PKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHNPT 188
Query: 192 GVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSY 251
GVDP EQW++I +++ K L FFD AYQGFASG D DA +VR F+ G + QSY
Sbjct: 189 GVDPRPEQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSY 248
Query: 252 AKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMY 311
A NMGLYGERVGA ++VCK + A RVESQLK++IRP+YS+PP++GA I ATIL +
Sbjct: 249 AXNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPLYSNPPLNGARIAATILTSPDLR 308
Query: 312 KEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKE 371
K+W E+K MADRIISMR QL L G+ +W HI QIGMF FTGL EQV +TKE
Sbjct: 309 KQWLQEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKE 368
Query: 372 YHIYMTSDGRISMAGLSSKTVPHLTDAIH 400
+ +YMT DGRIS+AG++S V +L AIH
Sbjct: 369 FSVYMTKDGRISVAGVTSGNVGYLAHAIH 397
>pdb|2CST|A Chain A, Crystal Structure Of The Closed Form Of Chicken Cytosolic
Aspartate Aminotransferase At 1.9 Angstroms Resolution
pdb|2CST|B Chain B, Crystal Structure Of The Closed Form Of Chicken Cytosolic
Aspartate Aminotransferase At 1.9 Angstroms Resolution
Length = 411
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/408 (52%), Positives = 283/408 (69%), Gaps = 6/408 (1%)
Query: 5 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVND 64
S+F + RAP + +T + +D K+NLGVGAYRT+EG+P VL VVRK EQL+ D
Sbjct: 3 SIFAAVPRAPPVAVFKLTADFREDGDSRKVNLGVGAYRTDEGQPWVLPVVRKVEQLIAGD 62
Query: 65 QSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY 124
S EYLPI+GL +F ++++ LG DSPAI RV +VQ L GTG+LR+GAEFL R Y
Sbjct: 63 GSLNHEYLPILGLPEFRANASRIALGDDSPAIAQKRVGSVQGLGGTGALRIGAEFLRRWY 122
Query: 125 H-----QLTIYIPQPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSG 178
+ +Y+ PTW NH VF AG ++TYRY+D A RGL+ QGLL+D+ AP
Sbjct: 123 NGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTYRYWDAAKRGLDLQGLLDDMEKAPEF 182
Query: 179 AIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMF 238
+I +LHACAHNPTG DPT ++W+QI +M+ + L PFFDSAYQGFASGSLD DA +VR F
Sbjct: 183 SIFILHACAHNPTGTDPTPDEWKQIAAVMKRRCLFPFFDSAYQGFASGSLDKDAWAVRYF 242
Query: 239 VADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGA 298
V++G E AQS++KN GLY ERVG LS+V K ED RV SQ++ ++R +S+PP GA
Sbjct: 243 VSEGFELFCAQSFSKNFGLYNERVGNLSVVGKDEDNVQRVLSQMEKIVRTTWSNPPSQGA 302
Query: 299 SIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFT 358
IVAT L ++ EW +K MADR++ MR +L L + GTPG W+HI QIGMF+FT
Sbjct: 303 RIVATTLTSPQLFAEWKDNVKTMADRVLLMRSELRSRLESLGTPGTWNHITDQIGMFSFT 362
Query: 359 GLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 406
GLN +QV +M KE HIY+ + GRI+M GL++K + ++ +IH AVT++
Sbjct: 363 GLNPKQVEYMIKEKHIYLMASGRINMCGLTTKNLDYVAKSIHEAVTKI 410
>pdb|1AAT|A Chain A, Oxoglutarate-Induced Conformational Changes In Cytosolic
Aspartate Aminotransferase
pdb|1AAT|B Chain B, Oxoglutarate-Induced Conformational Changes In Cytosolic
Aspartate Aminotransferase
Length = 411
Score = 440 bits (1131), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/408 (51%), Positives = 282/408 (69%), Gaps = 6/408 (1%)
Query: 5 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVND 64
S+F + RAP + +T + +D K+NLGVGAYRT+EG+P VL VVRK EQL+ +
Sbjct: 3 SIFAAVPRAPPVAVFKLTADFREDGDSRKVNLGVGAYRTDEGQPWVLPVVRKVEQLIAGN 62
Query: 65 QSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY 124
S EYLPI+GL +F ++++ LG DSPAI RV +VQ L GTG+LR+GAEFL R Y
Sbjct: 63 GSLNHEYLPILGLPEFRANASRIALGDDSPAIAQKRVGSVQGLGGTGALRIGAEFLRRWY 122
Query: 125 H-----QLTIYIPQPTWGNHPKVFTLAGLS-VKTYRYYDPATRGLNFQGLLEDLRAAPSG 178
+ +Y+ PTW NH VF AG ++TYRY+D A RGL+ QGLL D+ AP
Sbjct: 123 NGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTYRYWDAAKRGLDLQGLLSDMEKAPEF 182
Query: 179 AIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMF 238
+I +LHACAHNPTG DPT ++W+QI +M+ + L PFFDSAYQGFASG+L+ DA +VR F
Sbjct: 183 SIFILHACAHNPTGTDPTPDEWKQIAAVMKRRCLFPFFDSAYQGFASGNLEKDAWAVRYF 242
Query: 239 VADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGA 298
V++G E AQS++KN GLY ERVG LS+V K ED RV SQ++ ++R +S+PP GA
Sbjct: 243 VSEGFELFCAQSFSKNFGLYNERVGNLSVVGKDEDNVQRVLSQMEKIVRTTWSNPPSQGA 302
Query: 299 SIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFT 358
IVAT L ++ EW +K MADR++ MR +L L + GTPG W+HI QIGMF+FT
Sbjct: 303 RIVATTLTSPQLFAEWKDNVKTMADRVLLMRSELRSRLESLGTPGTWNHITDQIGMFSFT 362
Query: 359 GLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 406
GLN +QV +M KE HIY+ + GRI+M GL++K + ++ +IH AVT++
Sbjct: 363 GLNPKQVEYMIKEKHIYLMASGRINMCGLTTKNLDYVAKSIHEAVTKI 410
>pdb|1AJS|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/408 (50%), Positives = 280/408 (68%), Gaps = 6/408 (1%)
Query: 5 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVND 64
SVF ++ +A + + + +D P K+NLGVGAYRT++ +P VL VVRK EQ + N+
Sbjct: 4 SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANN 63
Query: 65 QSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY 124
S EYLPI+GL +F +++L LG DSPA+++ RV VQ L GTG+LR+GAEFLAR Y
Sbjct: 64 SSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWY 123
Query: 125 H-----QLTIYIPQPTWGNHPKVFTLAGLS-VKTYRYYDPATRGLNFQGLLEDLRAAPSG 178
+ +Y+ PTW NH VFT AG +++YRY+D RGL+ QG L DL AP
Sbjct: 124 NGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEF 183
Query: 179 AIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMF 238
+I +LHACAHNPTG DPT EQW+QI +M+ + L PFFDSAYQGFASG+L+ DA ++R F
Sbjct: 184 SIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243
Query: 239 VADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGA 298
V++G E AQS++KN GLY ERVG L++V K D RV SQ++ ++R +S+PP GA
Sbjct: 244 VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGA 303
Query: 299 SIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFT 358
IVA L D ++ EWT +K MADRI+SMR +L L A TPG W+HI QIGMF+FT
Sbjct: 304 RIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFT 363
Query: 359 GLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 406
GLN +QV ++ + HIY+ GRI+M GL++K + ++ +IH AVT++
Sbjct: 364 GLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEAVTKI 411
>pdb|1AJR|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
pdb|1AJR|B Chain B, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
pdb|1AJS|B Chain B, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 430 bits (1105), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/408 (50%), Positives = 279/408 (68%), Gaps = 6/408 (1%)
Query: 5 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVND 64
SVF ++ +A + + + +D P K+NLGVGAYRT++ +P VL VVRK EQ + N+
Sbjct: 4 SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANN 63
Query: 65 QSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY 124
S EYLPI+GL +F +++L LG DSPA+++ RV VQ L GTG+LR+GAEFLAR Y
Sbjct: 64 SSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWY 123
Query: 125 H-----QLTIYIPQPTWGNHPKVFTLAGLS-VKTYRYYDPATRGLNFQGLLEDLRAAPSG 178
+ +Y+ PTW NH VFT AG +++YRY+D RGL+ QG L DL AP
Sbjct: 124 NGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEF 183
Query: 179 AIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMF 238
+I +LHACAHNPTG DPT EQW+QI +M+ + L PFFDSAYQGFASG+L+ DA ++R F
Sbjct: 184 SIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243
Query: 239 VADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGA 298
V++G E AQS++ N GLY ERVG L++V K D RV SQ++ ++R +S+PP GA
Sbjct: 244 VSEGFELFCAQSFSXNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGA 303
Query: 299 SIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFT 358
IVA L D ++ EWT +K MADRI+SMR +L L A TPG W+HI QIGMF+FT
Sbjct: 304 RIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFT 363
Query: 359 GLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 406
GLN +QV ++ + HIY+ GRI+M GL++K + ++ +IH AVT++
Sbjct: 364 GLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEAVTKI 411
>pdb|3II0|A Chain A, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|B Chain B, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|C Chain C, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|D Chain D, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
Length = 422
Score = 427 bits (1097), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/396 (50%), Positives = 278/396 (70%), Gaps = 6/396 (1%)
Query: 18 ILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGL 77
+ +T + +D P K+NLGVGAYRT++ P VL VV+K EQ + ND S EYLPI+GL
Sbjct: 6 VFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGL 65
Query: 78 VDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH-----QLTIYIP 132
+F +++L LG DSPA+K+ RV VQ L GTG+LR+GA+FLAR Y+ +Y+
Sbjct: 66 AEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVS 125
Query: 133 QPTWGNHPKVFTLAGL-SVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPT 191
PTW NH VF+ AG +++YRY+D RGL+ QG L DL AP +IV+LHACAHNPT
Sbjct: 126 SPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPT 185
Query: 192 GVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSY 251
G+DPT EQW+QI +M+ + L PFFDSAYQGFASG+L+ DA ++R FV++G E AQS+
Sbjct: 186 GIDPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWAIRYFVSEGFEFFCAQSF 245
Query: 252 AKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMY 311
+KN GLY ERVG L++V K + +V SQ++ ++R +S+PP GA IVA+ L + ++
Sbjct: 246 SKNFGLYNERVGNLTVVGKEPESILQVLSQMEKIVRITWSNPPAQGARIVASTLSNPELF 305
Query: 312 KEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKE 371
+EWT +K MADRI++MR +L L A TPG W+HI QIGMF+FTGLN +QV ++ E
Sbjct: 306 EEWTGNVKTMADRILTMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLVNE 365
Query: 372 YHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRMG 407
HIY+ GRI+++GL++K + ++ +IH AVT++
Sbjct: 366 KHIYLLPSGRINVSGLTTKNLDYVATSIHEAVTKIA 401
>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASL|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ARG|A Chain A, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1ARG|B Chain B, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1C9C|A Chain A, Aspartate Aminotransferase Complexed With
C3-Pyridoxal-5'-Phosphate
pdb|1CQ6|A Chain A, Aspartate Aminotransferase Complex With
C4-Pyridoxal-5p-Phosphate
pdb|1CQ7|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C5-Pyridoxal- 5p-Phosphate
pdb|1CQ8|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C6-Pyridoxal- 5p-Phosphate
pdb|1X28|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X28|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X29|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X29|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X2A|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1X2A|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1AAW|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
pdb|1AMQ|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMR|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMS|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1ARS|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ART|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ASA|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASD|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With N-Meplp
pdb|1ASE|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With Plp-N-Oxide
pdb|3PA9|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 7.5
pdb|3PAA|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 8.0
pdb|3QPG|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/398 (45%), Positives = 244/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f
pdb|1IX7|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Maleate
Complex
Length = 396
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/398 (45%), Positives = 244/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGFYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASG|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
Length = 396
Score = 360 bits (925), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 244/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD A+QGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAFQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An
Active-Site Mutant Of Aspartate Aminotransferase From
Escherichia Coli
pdb|4DBC|A Chain A, Substrate Activation In Aspartate Aminotransferase
Length = 396
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 243/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+ N GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSANFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli
L-Aspartate Aminotransferase
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms At Ph 6.0
pdb|2QBT|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph 8.0)
pdb|2QA3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph6.5)
pdb|2QB2|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Dihydro-2thiophenecarboylic Acid (Sadta) Via Two
Mechanisms (At Ph 7.0).
pdb|2QB3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-aspartate Aminotransferase By
(s)-4,5-dihydro-2-thiophenecarboxylic Acid (sadta) Via
Two Mechanisms (at Ph 7.5)
pdb|3QN6|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 243/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+ N GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
Length = 396
Score = 359 bits (922), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 243/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+ N GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSHNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm.
pdb|4F5M|B Chain B, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm
Length = 406
Score = 359 bits (922), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/397 (45%), Positives = 242/397 (60%), Gaps = 2/397 (0%)
Query: 7 FGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQS 66
F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ +++
Sbjct: 12 FENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET 71
Query: 67 RVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQ 126
K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 72 -TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSV 130
Query: 127 LTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHAC 186
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H C
Sbjct: 131 KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGC 190
Query: 187 AHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECL 246
HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E +
Sbjct: 191 CHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELI 249
Query: 247 VAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILK 306
VA SY+ N GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 250 VASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILS 309
Query: 307 DSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVA 366
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 310 NDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVL 369
Query: 367 FMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 370 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 406
>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
Length = 396
Score = 358 bits (920), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 243/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K I YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIDANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASC|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1SPA|A Chain A, Role Of Asp222 In The Catalytic Mechanism Of Escherichia
Coli Aspartate Aminotransferase: The Amino Acid Residue
Which Enhances The Function Of The Enzyme-Bound Coenzyme
Pyridoxal 5'-Phosphate
Length = 396
Score = 358 bits (920), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 243/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP F AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFAFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y
And R386f Of Escherichia Coli Aspartate Aminotransferase
Length = 396
Score = 358 bits (919), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 243/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + G +++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGFVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1IX8|A Chain A, Aspartate Aminotransferase Active Site Mutant V39fN194A
Length = 396
Score = 358 bits (918), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 243/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGFYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C H PTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation,
With Bound Maleate
pdb|5EAA|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation
Length = 396
Score = 357 bits (917), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 243/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 SCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1G4V|A Chain A, Aspartate Aminotransferase Active Site Mutant N194a/y225f
Length = 396
Score = 357 bits (917), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 243/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C H PTG+DPTLEQW+ + QL KG LP FD A+QGFA G L+ DA+ +R F A E
Sbjct: 180 CCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAFQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid
Length = 396
Score = 357 bits (916), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 180/398 (45%), Positives = 241/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITTAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YSSPP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IKQ GMF F GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFTIKQNGMFFFGGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRLNVAGMTPDNLAPLCEAIVAVL 396
>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHY|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHX|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHX|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHG|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHG|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHF|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHF|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHE|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHE|B Chain B, Aspartate Aminotransferase Hexamutant
Length = 396
Score = 357 bits (916), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 180/398 (45%), Positives = 243/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGLYYDETGKIPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q G+G+LRV A+FLA++
Sbjct: 61 T-TKLYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YSSPP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSSPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f
Mutation, With Bound Maleate
Length = 396
Score = 357 bits (916), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 243/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 FCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w
Mutation, With Bound Maleate
Length = 396
Score = 357 bits (916), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 243/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 WCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y
Mutation, With Bound Maleate
Length = 396
Score = 357 bits (916), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 243/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 YCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid
pdb|2D63|A Chain A, Aspartate Aminotransferase Mutant Ma With Isovaleric Acid
pdb|2D7Y|A Chain A, Aspartate Aminotransferase Mutant Ma
Length = 396
Score = 357 bits (915), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 180/398 (45%), Positives = 242/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ D P K++LG+G Y E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YSSPP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1BQA|A Chain A, Aspartate Aminotransferase P195a Mutant
pdb|1BQA|B Chain B, Aspartate Aminotransferase P195a Mutant
Length = 396
Score = 356 bits (914), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 242/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HN TG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNATGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+ N GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1ARI|A Chain A, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
pdb|1ARI|B Chain B, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
Length = 396
Score = 356 bits (914), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 243/398 (61%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+ NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSHPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT
pdb|1ARH|B Chain B, Aspartate Aminotransferase, Y225rR386A MUTANT
Length = 396
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 242/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD A QGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFARQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + G +++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGAVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1G7W|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR386L
Length = 396
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 242/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C H PTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + G +++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGLVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1G4X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292L
Length = 396
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 242/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C H PTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K I YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAILANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOI|A Chain A, Hydrocinnamic Acid-Bound Structure Of Hexamutant + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 354 bits (909), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 242/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGLYYDETGKIPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q G+G+LRV A+FLA++
Sbjct: 61 T-TKLYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+ N GLY ERVGA ++V + R SQ+K IR YSSPP HGAS+VATIL
Sbjct: 239 IVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRDNYSSPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1.
pdb|4F5F|B Chain B, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1
Length = 406
Score = 353 bits (907), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 177/398 (44%), Positives = 241/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
F I AP DPILG+ + D P K++LGVG Y+ E GK VL V+KAEQ L+ ++
Sbjct: 11 TFENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVLTSVKKAEQYLLENE 70
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL + GL +F + + +L+ G S I D R T Q G+G+LRVGA+FLA++
Sbjct: 71 T-TKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVGADFLAKNTS 129
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH +F AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 130 VKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 189
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP D AYQGF G L+ DA+ +R F A E
Sbjct: 190 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLIDFAYQGFGRG-LEEDAEGLRAFAAMHKEL 248
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+ N GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 249 IVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 308
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 309 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 368
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GRI++AG++ + L +AI A +
Sbjct: 369 LRLREEFGVYAVASGRINVAGMTPDNMAPLCEAIVAVL 406
>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|3ZZK|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|4A00|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
Length = 396
Score = 353 bits (906), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 241/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGQGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD A QGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAQQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K I YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIYANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1BQD|A Chain A, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
pdb|1BQD|B Chain B, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
Length = 396
Score = 353 bits (906), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 177/398 (44%), Positives = 241/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ +W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNASWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HN TG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNATGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+ N GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab
pdb|2D7Z|A Chain A, Aspartate Aminotransferase Mutant Mab Complexed With
Maleic Acid
Length = 396
Score = 353 bits (905), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 240/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ D P K++LG+G Y E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P W H VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YSSPP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1G7X|A Chain A, Aspartate Aminotransferase Active Site Mutant
N194aR292LR386L
Length = 396
Score = 352 bits (904), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 177/398 (44%), Positives = 241/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ + D P K+NLG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C H PTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K I YS+PP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAILANYSNPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + G +++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGLVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
GLUTARIC ACID
pdb|1CZE|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
SUCCINIC ACID
Length = 396
Score = 349 bits (896), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 238/398 (59%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ D P K++LG+G Y E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VRRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVG ++V + R SQ+K IR YSSPP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGTCTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IKQ GMF F GL EQV
Sbjct: 299 GNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFTIKQNGMFFFGGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRLNVAGMTPDNLAPLCEAIVAVL 396
>pdb|4EU1|A Chain A, Structure Of A Mitochondrial Aspartate Aminotransferase
From Trypanosoma Brucei
pdb|4EU1|B Chain B, Structure Of A Mitochondrial Aspartate Aminotransferase
From Trypanosoma Brucei
Length = 409
Score = 349 bits (895), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/386 (44%), Positives = 243/386 (62%), Gaps = 7/386 (1%)
Query: 16 DPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIV 75
DPILG+ + D + K+NL +G YR + +P VL V++A L N +Y P+
Sbjct: 26 DPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQA-TLGTN-----MDYAPVT 79
Query: 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLT-IYIPQP 134
G+ F + + KL G A++D R+ + Q L GTG+LR+G + L R IY P
Sbjct: 80 GIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDV 139
Query: 135 TWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVD 194
+ NH +F AG+ + Y YYDPAT+GLN G+LE L AP G+++L+HACAHNPTGVD
Sbjct: 140 GYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVD 199
Query: 195 PTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKN 254
PT + W Q+ +++ + +PF D AYQGFA+G LD DA R V +VAQS++ N
Sbjct: 200 PTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSXN 259
Query: 255 MGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEW 314
GLYG R GAL I + + A R+ SQL L+IRPMY++PP++GA +V++ILKD + W
Sbjct: 260 FGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALW 319
Query: 315 TLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHI 374
ELK M+ RI +R++L L A G+ DWSHI +Q+GM +TGL EQV + EYHI
Sbjct: 320 KKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLTREQVELLRSEYHI 379
Query: 375 YMTSDGRISMAGLSSKTVPHLTDAIH 400
YMT +GR +++GL+S V +++ AIH
Sbjct: 380 YMTLNGRAAVSGLNSTNVEYVSQAIH 405
>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOK|A Chain A, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
pdb|1TOK|B Chain B, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
Length = 396
Score = 348 bits (893), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 239/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I DPILG+ + D P K++LG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITATTADPILGLADLFRADERPGKIDLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q G+G+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+ N LY ERVGA ++V + R Q+K IR YSSPP HGAS+VATIL
Sbjct: 239 IVASSYSXNFALYNERVGACTLVAADSETVDRAFGQMKAAIRANYSSPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
pdb|1TOG|B Chain B, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 348 bits (893), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 239/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I DPILG+ + D P K++LG+G Y+ E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITATTADPILGLADLFRADERPGKIDLGIGVYKDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q G+G+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+ N LY ERVGA ++V + R Q+K IR YSSPP HGAS+VATIL
Sbjct: 239 IVASSYSXNFALYNERVGACTLVAADSETVDRAFGQMKAAIRDNYSSPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3.
pdb|4F5H|B Chain B, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3
Length = 406
Score = 348 bits (892), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 239/398 (60%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
F I AP DPILG+ + D P K++LG+G Y+ E GK V+ V+KAEQ L+ ++
Sbjct: 11 TFENITAAPADPILGLADLFRADERPGKVDLGIGVYKDETGKTPVMTSVKKAEQYLLENE 70
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL + GL +F + + +L+ G S I D R T Q G+G+LRV A+FLA++
Sbjct: 71 T-TKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 129
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P+W NH +F AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 130 VKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 189
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG DPTLEQW+ + QL KG LP D AYQGF G L+ DA+ +R F A E
Sbjct: 190 CCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDFAYQGFGRG-LEEDAEGLRAFAAMHKEL 248
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+ N GLY ERVGA ++V + R SQ+K IR YSSPP HGAS+VATIL
Sbjct: 249 IVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSSPPAHGASVVATIL 308
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI +RQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 309 SNDALRAIWEQELTDMRQRIQRLRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 368
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 369 LRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 406
>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric
Acid
pdb|2D65|A Chain A, Aspartate Aminotransferase Mutant Mabc
Length = 396
Score = 348 bits (892), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 237/398 (59%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ D P K++LG+G Y E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P W H VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VKRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVGA ++V + R SQ+K IR YSSPP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IKQ GMF F GL EQV
Sbjct: 299 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFTIKQNGMFFFGGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRLNVAGMTPDNLAPLCEAIVAVL 396
>pdb|4F5I|A Chain A, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4.
pdb|4F5I|B Chain B, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4
Length = 406
Score = 347 bits (889), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 175/397 (44%), Positives = 238/397 (59%), Gaps = 2/397 (0%)
Query: 7 FGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQS 66
F I AP DPILG+ + D P K++LGVG Y+ E GK V+ V+KAEQ L+ +++
Sbjct: 12 FENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVMTSVKKAEQYLLENET 71
Query: 67 RVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQ 126
K YL I G+ +F + + +L+ G S I D R T Q G+G+LRV A+FLA++
Sbjct: 72 -TKTYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSV 130
Query: 127 LTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHAC 186
+++ PTW NH +F AGL V+ Y YYD L+F L+ L A +G +VL H C
Sbjct: 131 KRVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGC 190
Query: 187 AHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECL 246
HNPTG+DPTLEQW+ + QL KG LP D AYQGF G L+ DA+ +R F A E +
Sbjct: 191 CHNPTGIDPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKELI 249
Query: 247 VAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILK 306
VA S + N LY ERVGA ++V + R SQ+K IR YSSPP HGAS+VATIL
Sbjct: 250 VASSCSXNFSLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSSPPAHGASVVATILS 309
Query: 307 DSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVA 366
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 310 NDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVL 369
Query: 367 FMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GRI++AG++ + L +AI A +
Sbjct: 370 RLREEFGVYAVASGRINVAGMTPDNMAPLCEAIVAVL 406
>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P5.
pdb|4F5J|B Chain B, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P5
Length = 406
Score = 345 bits (886), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/397 (43%), Positives = 238/397 (59%), Gaps = 2/397 (0%)
Query: 7 FGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQS 66
F I AP DPILG+ + D P K++LGVG Y+ E GK VL V+KAEQ L+ +++
Sbjct: 12 FENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVLTSVKKAEQYLLENET 71
Query: 67 RVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQ 126
K YL + GL +F + + +L+ G S I D R T Q G+G+LRV A+FLA++
Sbjct: 72 -TKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSV 130
Query: 127 LTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHAC 186
+++ P+W NH +F AGL V+ Y YYD L+F L+ L A +G +VL H C
Sbjct: 131 KRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGC 190
Query: 187 AHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECL 246
HNPTG DPTLEQW+ + QL KG LP D AYQGF G L+ DA+ +R F A E +
Sbjct: 191 CHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKELI 249
Query: 247 VAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILK 306
VA S + N GLY ERVGA ++V + R SQ+K IR YS+PP HGAS+VATIL
Sbjct: 250 VASSCSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILS 309
Query: 307 DSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVA 366
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 310 NDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVL 369
Query: 367 FMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 370 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 406
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric
Acid
Length = 396
Score = 345 bits (886), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/398 (44%), Positives = 236/398 (59%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F I AP DPILG+ D P K++LG+G Y E GK VL V+KAEQ L+ ++
Sbjct: 1 MFENITTAPADPILGLADLLRADERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL I G+ +F + + +L+ G S I D R T Q GTG+LRV A+FLA++
Sbjct: 61 T-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTS 119
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ P W H VF AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 120 VRRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 179
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG+DPTLEQW+ + QL KG LP FD AYQGFA G L+ DA+ +R F A E
Sbjct: 180 CCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKEL 238
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA SY+KN GLY ERVG ++V + R SQ+K IR YSSPP HGAS+VATIL
Sbjct: 239 IVASSYSKNFGLYNERVGTCTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATIL 298
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IKQ GMF F GL EQV
Sbjct: 299 GNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFTIKQNGMFFFGGLTKEQV 358
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 359 LRLREEFGVYAVASGRLNVAGMTPDNLAPLCEAIVAVL 396
>pdb|1YAA|A Chain A, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|B Chain B, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|C Chain C, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|D Chain D, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
Length = 412
Score = 345 bits (885), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/408 (42%), Positives = 248/408 (60%), Gaps = 7/408 (1%)
Query: 3 SESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLV 62
S ++F I P D + G+ Y +D K++LG+GAYR + GKP VL V+ AE+L+
Sbjct: 1 SATLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIH 60
Query: 63 NDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLAR 122
ND S EYL I GL +AK+I G S A++++RV +VQ LSGTG+L + A+F ++
Sbjct: 61 NDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSK 120
Query: 123 HYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVL 182
+ +Y+ +PTW NH +F GL TY Y+ T+ L+ G L ++ AP G+I +
Sbjct: 121 FFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFV 180
Query: 183 LHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFV--- 239
LH+CAHNPTG+DPT EQW QI + SK + FD+AYQGFA+G LD DA +VR+ V
Sbjct: 181 LHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKL 240
Query: 240 ADGGECLVAQSYAKNMGLYGERVG----ALSIVCKTEDVASRVESQLKLVIRPMYSSPPI 295
+ V QS+AKN G+YGERVG AL+ + + + V SQL +IR S+PP
Sbjct: 241 STVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPA 300
Query: 296 HGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMF 355
+GA IVA +L+ + ++W ++ M+ RI MR L D L GTPG+W HI+ Q GMF
Sbjct: 301 YGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMF 360
Query: 356 TFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+FTGL + V + + + +Y+ + GR S+AGL+ V ++ AI V
Sbjct: 361 SFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAIDEVV 408
>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P2.
pdb|4F5G|B Chain B, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P2
Length = 406
Score = 343 bits (881), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 237/397 (59%), Gaps = 2/397 (0%)
Query: 7 FGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQS 66
F I AP DPILG+ + D P K++LGVG Y+ E GK VL V+KAEQ L+ +++
Sbjct: 12 FENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVLTSVKKAEQYLLENET 71
Query: 67 RVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQ 126
K YL + GL +F + + +L+ G S I D R T Q G+G+LRV A+FLA++
Sbjct: 72 -TKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTSV 130
Query: 127 LTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHAC 186
+++ P+W NH +F AGL V+ Y YYD L+F L+ L A +G +VL H C
Sbjct: 131 KRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGC 190
Query: 187 AHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECL 246
HNPTG DPTLEQW+ + QL KG LP D AYQGF G L+ DA+ +R F A E +
Sbjct: 191 CHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKELI 249
Query: 247 VAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILK 306
VA S + N GLY ERVGA ++V + R Q+K IR YS+PP HGAS+VATIL
Sbjct: 250 VASSCSXNFGLYNERVGACTLVAADSETVDRAFGQMKAAIRANYSNPPAHGASVVATILS 309
Query: 307 DSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVA 366
+ + W EL M RI MRQ + L +G D+S +IKQ GMF+F+GL EQV
Sbjct: 310 NDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFVIKQNGMFSFSGLTKEQVL 369
Query: 367 FMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG++ + L +AI A +
Sbjct: 370 RLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 406
>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6.
pdb|4F5K|B Chain B, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6
Length = 406
Score = 343 bits (879), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 236/398 (59%), Gaps = 2/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
F I AP DPILG+ + D P K++LGVG Y+ E GK V+ V+KAEQ L+ ++
Sbjct: 11 TFENITAAPADPILGLADLFRADERPGKVDLGVGVYKDETGKTPVMTSVKKAEQYLLENE 70
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K YL + GL +F + + +L+ G S I D R T Q G+G+LRV A+FLA++
Sbjct: 71 T-TKTYLGLDGLPEFGRCTQELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAKNTS 129
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+++ PTW NH +F AGL V+ Y YYD L+F L+ L A +G +VL H
Sbjct: 130 VKRVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHG 189
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG DPTLEQW+ + QL KG LP D AYQGF G L+ DA+ +R F A E
Sbjct: 190 CCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKEL 248
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
+VA S + N LY ERVGA ++V + R Q+K IR YS+PP HGAS+VATIL
Sbjct: 249 IVASSCSXNFSLYNERVGACTLVAADSETVDRAFGQMKAAIRANYSNPPAHGASVVATIL 308
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
+ + W EL M RI MRQ + L +G D+S IIKQ GMF+F+GL EQV
Sbjct: 309 SNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQV 368
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GRI++AG++ + L +AI A +
Sbjct: 369 LRLREEFGVYAVASGRINVAGMTPDNMAPLCEAIVAVL 406
>pdb|4H51|A Chain A, Crystal Structure Of A Putative Aspartate Aminotransferase
From Leishmania Major Friedlin
pdb|4H51|B Chain B, Crystal Structure Of A Putative Aspartate Aminotransferase
From Leishmania Major Friedlin
Length = 420
Score = 338 bits (866), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 177/374 (47%), Positives = 241/374 (64%), Gaps = 8/374 (2%)
Query: 33 KLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGAD 92
K NL +GAYR E+G+P L VVRKAEQLL+ D + EYLPI G F + K+I G
Sbjct: 46 KANLVIGAYRDEQGRPYPLRVVRKAEQLLL-DMNLDYEYLPISGYQPFIDEAVKIIYGN- 103
Query: 93 SPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLT--IYIPQPTWGNHPKVFTLAGL-S 149
++ + VQ LSGTG++ +GA+ L R + T IY+ PTW NH V AG +
Sbjct: 104 --TVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKN 161
Query: 150 VKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRS 209
+ TY YYDP T LNF+G+ +D+ AAP G++ +LH CAHNPTGVDP+ EQW +I LM +
Sbjct: 162 ICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLA 221
Query: 210 KGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVC 269
K FFDSAYQG+ASGSLD DA + R+F G E L+AQS++ NMGLY ER G LS++
Sbjct: 222 KHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSXNMGLYSERAGTLSLLL 281
Query: 270 KTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMR 329
K + + V+S + +IR Y+ PP HGA + IL ++ + KEW EL AMA+RI +MR
Sbjct: 282 KDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMR 341
Query: 330 QQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSS 389
+ ++D L TPG W H+I QIGMF+F GL+ Q + + ++I++T GR +MAGL+
Sbjct: 342 RTVYDELLRLQTPGSWEHVINQIGMFSFLGLSKAQCEY-CQNHNIFITVSGRANMAGLTH 400
Query: 390 KTVPHLTDAIHAAV 403
+T L I+ AV
Sbjct: 401 ETALMLAQTINDAV 414
>pdb|3MEB|A Chain A, Structure Of Cytoplasmic Aspartate Aminotransferase From
Giardia Lamblia
pdb|3MEB|B Chain B, Structure Of Cytoplasmic Aspartate Aminotransferase From
Giardia Lamblia
Length = 448
Score = 334 bits (857), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 182/424 (42%), Positives = 257/424 (60%), Gaps = 20/424 (4%)
Query: 3 SESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLV 62
S SVF +P D IL +TV YN DT+P K+NLGVGAYR E GKP +L V++AE ++
Sbjct: 21 SMSVFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIIS 80
Query: 63 NDQSRV-KEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLA 121
+D S+ KEY P+ G F + + L+ G DS A ++ R+ + Q LSGTGSL +G EFL
Sbjct: 81 SDLSKYNKEYPPVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLH 140
Query: 122 RHYHQLTIYIPQPTWGNH----PKVFTLAGLSVKTYRYY-DPATRGLNFQGLLEDLRAAP 176
+ Y+P TW NH KVF + K Y Y ++F +D+++AP
Sbjct: 141 LWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAP 200
Query: 177 SGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVR 236
+I L HACAHNP+G+D T QW+++ +M+ K + FFDSAYQGFA+GS +ADA +VR
Sbjct: 201 EKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVR 260
Query: 237 MFVADGGECLVAQSYAKNMGLYGERVGALSIVC--------KTEDVASRVESQLKLVIRP 288
MFV G E LVAQS++KN GLYGER+G L +V K + +++ + S + L IR
Sbjct: 261 MFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRK 320
Query: 289 MYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTP-----G 343
+S IHGA IV I+ D + + + +K M+ RI MR L +L+ R TP G
Sbjct: 321 TWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKG 380
Query: 344 DWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMT-SDGRISMAGLSSKTVPHLTDAIHAA 402
W HI+ IGMFTFTGL E V ++ +++ IY+ + GR+SM GL+ ++ +AIH A
Sbjct: 381 TWDHILTAIGMFTFTGLTPEHVDYLKEKWSIYLVKAGGRMSMCGLTESNCDYVAEAIHDA 440
Query: 403 VTRM 406
VT++
Sbjct: 441 VTKL 444
>pdb|4F4E|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei Covalently Bound To
Pyridoxal Phosphate
pdb|4F4E|B Chain B, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei Covalently Bound To
Pyridoxal Phosphate
Length = 420
Score = 330 bits (846), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 182/399 (45%), Positives = 248/399 (62%), Gaps = 2/399 (0%)
Query: 3 SESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLV 62
S S+F + AP DPILG+ A+N DT P K+NLGVG Y E+GK +L VR AE+ V
Sbjct: 21 SMSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARV 80
Query: 63 NDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLAR 122
+ + YLPI G+ ++ KL+LG DSP I RV T Q L GTG+L++GA+FL
Sbjct: 81 -EAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRT 139
Query: 123 HYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVL 182
+ + I P+W NH +F +AG V Y YYD T G+NF G+L L G IV+
Sbjct: 140 LNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVV 199
Query: 183 LHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADG 242
LHAC HNPTGVD QW Q+ ++++++ L+PF D AYQGF S++ADA +VR+F A
Sbjct: 200 LHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGE-SIEADAAAVRLFAAAN 258
Query: 243 GECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVA 302
V+ S++ + LYGERVGALSI+ ++D A+RV SQLK VIR YS+PP HG +IVA
Sbjct: 259 LNVFVSSSFSXSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVA 318
Query: 303 TILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNS 362
+L + W EL M DRI +MR L + L A G D+S I Q GMF+++GL S
Sbjct: 319 AVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLTS 378
Query: 363 EQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHA 401
QV + +E+ IY S GRI +A L+++ + + +AI A
Sbjct: 379 AQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAIAA 417
>pdb|4EFF|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei
Length = 420
Score = 330 bits (846), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 183/399 (45%), Positives = 249/399 (62%), Gaps = 2/399 (0%)
Query: 3 SESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLV 62
S S+F + AP DPILG+ A+N DT P K+NLGVG Y E+GK +L VR AE+ V
Sbjct: 21 SMSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARV 80
Query: 63 NDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLAR 122
+ + YLPI G+ ++ KL+LG DSP I RV T Q L GTG+L++GA+FL
Sbjct: 81 -EAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRT 139
Query: 123 HYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVL 182
+ + I P+W NH +F +AG V Y YYD T G+NF G+L L G IV+
Sbjct: 140 LNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVV 199
Query: 183 LHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADG 242
LHAC HNPTGVD QW Q+ ++++++ L+PF D AYQGF S++ADA +VR+F A
Sbjct: 200 LHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGE-SIEADAAAVRLFAAAN 258
Query: 243 GECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVA 302
V+ S++K+ LYGERVGALSI+ ++D A+RV SQLK VIR YS+PP HG +IVA
Sbjct: 259 LNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVA 318
Query: 303 TILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNS 362
+L + W EL M DRI +MR L + L A G D+S I Q GMF+++GL S
Sbjct: 319 AVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLTS 378
Query: 363 EQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHA 401
QV + +E+ IY S GRI +A L+++ + + +AI A
Sbjct: 379 AQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAIAA 417
>pdb|3TAT|A Chain A, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|B Chain B, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|C Chain C, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|D Chain D, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|E Chain E, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|F Chain F, Tyrosine Aminotransferase From E. Coli
Length = 397
Score = 318 bits (815), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 240/398 (60%), Gaps = 1/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F K+ DPIL + + +D K+NL +G Y E+G L V +AE L
Sbjct: 1 MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQP 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
YLP+ GL + A L+ GAD P +K RV T+Q L G+G+L+VGA+FL R++
Sbjct: 61 HGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFP 120
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+ +++ PTW NH +F AG V TY +YD AT G+ F LL L+ P+ +IVLLH
Sbjct: 121 ESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHP 180
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG D T +QW+ + ++++++ L+PF D AYQGF +G ++ DA ++R + G
Sbjct: 181 CCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAG-MEEDAYAIRAIASAGLPA 239
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
LV+ S++K LYGERVG LS++C+ + A RV QLK +R YSSPP GA +VA +L
Sbjct: 240 LVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVL 299
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
D + W E++ M RI++MRQ+L LS ++ +++ Q GMF++TGL++ QV
Sbjct: 300 NDEALKASWLAEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQV 359
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y+ + GR+ +AGL++ V + A A +
Sbjct: 360 DRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAVM 397
>pdb|3FSL|A Chain A, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|B Chain B, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|C Chain C, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|D Chain D, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|E Chain E, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|F Chain F, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
Length = 397
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 240/398 (60%), Gaps = 1/398 (0%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+F K+ DPIL + + +D K+NL +G Y E+G L V +AE L
Sbjct: 1 MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQP 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
YLP+ GL + A L+ GAD P +K RV T+Q L G+G+L+VGA+FL R++
Sbjct: 61 HGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFP 120
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
+ +++ PTW NH +F AG V TY +YD AT G+ F LL L+ +G+IVLLH
Sbjct: 121 ESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHP 180
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG D T +QW+ + ++++++ L+PF D AYQGF +G ++ DA ++R + G
Sbjct: 181 CCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAG-MEEDAYAIRAIASAGLPA 239
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATIL 305
LV+ S++K LYGERVG LS++C+ + A RV QLK +R YSSPP GA +VA +L
Sbjct: 240 LVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVL 299
Query: 306 KDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQV 365
D + W E++ M RI++MRQ+L LS ++ +++ Q GMF++TGL++ QV
Sbjct: 300 NDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQV 359
Query: 366 AFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y+ + GR+ +AGL++ V + A A +
Sbjct: 360 DRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAVM 397
>pdb|3UAK|A Chain A, Crystal Structure Of De Novo Designed Cysteine Esterase
Ech14, Northeast Structural Genomics Consortium Target
Or54
pdb|3UAK|B Chain B, Crystal Structure Of De Novo Designed Cysteine Esterase
Ech14, Northeast Structural Genomics Consortium Target
Or54
Length = 406
Score = 307 bits (787), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 168/397 (42%), Positives = 226/397 (56%), Gaps = 2/397 (0%)
Query: 7 FGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQS 66
F I AP DPI G+ + D P K+NLG+ Y E GK VL V+KAEQ L+ +++
Sbjct: 2 FENITAAPADPIYGLADLFRADERPGKINLGLALYYDETGKIPVLTSVKKAEQYLLENET 61
Query: 67 RVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQ 126
K YL I G+ +F + + +L+ G S I D R T Q G G+LRV A+FLA++
Sbjct: 62 -TKLYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGHGALRVAADFLAKNTSV 120
Query: 127 LTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHAC 186
+++ P+ VF AGL V+ Y YYD L+F L+ L A +G +VL C
Sbjct: 121 KRVWVYNPSSNCSKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFTGC 180
Query: 187 AHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECL 246
HNPTG+DPTLEQW+ + QL KG LP F YQGFA G L+ DA+ +R F A E +
Sbjct: 181 CHNPTGIDPTLEQWQTLAQLSVEKGWLPLFTFFYQGFARG-LEEDAEGLRAFAAXHKELI 239
Query: 247 VAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILK 306
VA SY+KN GLY E VGA ++V + R SQ K IR YSSPP HGAS+VATIL
Sbjct: 240 VASSYSKNFGLYNESVGACTLVAADSETVDRAFSQXKAAIRDNYSSPPAHGASVVATILS 299
Query: 307 DSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVA 366
+ + W EL RI RQ + L +G D+S IIKQ G F+F+GL EQV
Sbjct: 300 NDALRAIWEQELTDXRQRIQRXRQLFVNTLQEKGANRDFSFIIKQNGXFSFSGLTKEQVL 359
Query: 367 FMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 403
+ +E+ +Y + GR+++AG + L +AI A +
Sbjct: 360 RLREEFGVYAVASGRVNVAGXTPDNXAPLCEAIVAVL 396
>pdb|1AY4|A Chain A, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY4|B Chain B, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY5|A Chain A, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY5|B Chain B, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY8|A Chain A, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|1AY8|B Chain B, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|2AY1|A Chain A, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY1|B Chain B, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY2|A Chain A, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY2|B Chain B, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY3|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY3|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY4|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY4|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY5|A Chain A, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY5|B Chain B, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY6|A Chain A, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY6|B Chain B, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY7|A Chain A, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY7|B Chain B, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY8|A Chain A, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY8|B Chain B, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY9|A Chain A, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
pdb|2AY9|B Chain B, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
Length = 394
Score = 264 bits (675), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 213/396 (53%), Gaps = 9/396 (2%)
Query: 6 VFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQ 65
+ G + D IL + + D K++LGVG Y+ G ++ V AEQ ++ +
Sbjct: 1 MLGNLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETE 60
Query: 66 SRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYH 125
+ K Y + G +F K +LILG +K T+ + GTG+LR E
Sbjct: 61 T-TKTYAGLSGEPEFQKAMGELILG---DGLKSETTATLATVGGTGALRQALELARMANP 116
Query: 126 QLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHA 185
L +++ PTW NH + GL V+TYRY+D TRG++F+G+ DL AA G +VLLH
Sbjct: 117 DLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHG 176
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGEC 245
C HNPTG + TL+QW +I ++ G LP D AYQGF G L+ DA R+ + E
Sbjct: 177 CCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDG-LEEDAAGTRLIASRIPEV 235
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQ--LKLVIRPMYSSPPIHGASIVAT 303
L+A S +KN G+Y ER G L +C D A+R +Q + + R YS PP HGA IV+T
Sbjct: 236 LIAASCSKNFGIYRERTGCLLALCA--DAATRELAQGAMAFLNRQTYSFPPFHGAKIVST 293
Query: 304 ILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSE 363
+L + +W EL+A+ ++ +R+QL L + + + GMF+ G E
Sbjct: 294 VLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGATPE 353
Query: 364 QVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAI 399
QV + +E+ IYM D RI++AGL+ T+P L AI
Sbjct: 354 QVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAI 389
>pdb|3K7Y|A Chain A, Aspartate Aminotransferase Of Plasmodium Falciparum
Length = 405
Score = 228 bits (581), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 214/395 (54%), Gaps = 7/395 (1%)
Query: 16 DPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIV 75
D IL + +DT K+NL +G ++G + + V A++L V + + K YL
Sbjct: 14 DNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADKL-VTENYKEKPYLLGN 72
Query: 76 GLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPT 135
G DF+ L+ LI G +S I+D ++ T+QC+ GTG++ V EFL + + T+Y+ P
Sbjct: 73 GTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFL-KMLNVETLYVTNPP 131
Query: 136 WGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDP 195
+ NH + G ++K ++D +N+ L DLR P+G+ V+L +NP V+
Sbjct: 132 YINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNI 191
Query: 196 TLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNM 255
+ +++I +++ K + FD AYQGF +L+ D +R F V QS++KNM
Sbjct: 192 EEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNM 251
Query: 256 GLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWT 315
LYGER GAL IVCK ++ V + L ++R YSSP IH I+ +L + + W
Sbjct: 252 SLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWI 311
Query: 316 LELKAMADRIISMRQQLFDALSA----RGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKE 371
EL ++ RI + R F+ L DW+ KQ G+F+F L + ++A K
Sbjct: 312 KELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA-KIAEHLKT 370
Query: 372 YHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 406
+HIY+ ++GRI+++G++ V ++ D I +++++
Sbjct: 371 HHIYIINNGRINVSGITKNNVDYIADKICLSLSQI 405
>pdb|3RQ1|A Chain A, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|B Chain B, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|C Chain C, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|D Chain D, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
Length = 418
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 159/391 (40%), Gaps = 32/391 (8%)
Query: 34 LNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADS 93
+N +GA EEG + L V K E L ++D V Y PI G+ DF + K G
Sbjct: 41 VNGTLGAIHDEEGNLVFLKTV-KEEYLSLSDSEHVG-YAPIAGIPDFLCAAEKECFGNFR 98
Query: 94 PAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQL--TIYIPQPTWGNHPKVFTLAGLSVK 151
P + + ++ GTG G L +Y + + WG + + + G ++
Sbjct: 99 P---EGHIRSIATAGGTG----GIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLV 151
Query: 152 TYRYYDPATRGLN--FQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRS 209
TY +D + FQ + +L A + +V+ + +NPTG + W+ I ++
Sbjct: 152 TYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKD 211
Query: 210 ------KGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGL--YGER 261
++ D AY + SG D F E L Y+ + G YG+R
Sbjct: 212 LVAIGRNNVIIGIDVAYLDY-SGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTXYGQR 270
Query: 262 VGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAM 321
VGA + E++A K R +S+ A I+ D +KE+ E
Sbjct: 271 VGAXIGISDDEEIADEFFEVNKSTSRATWSNICRPAXRTXANIVADPAKFKEYEAERNCY 330
Query: 322 ADRIISMRQQLFDALSAR-GTPGDWSHIIKQIGMF-TFTGLNSEQVAFMTKEYHIYMT-- 377
++I R +F +A+ G P + + G F T ++ + K+ HIY+
Sbjct: 331 Y-QLIRDRADIFKQEAAQVGLP----XLPYRGGFFITIPTDSANAICEELKKEHIYVIAL 385
Query: 378 SDG-RISMAGLSSKTVPHLTDAIHAAVTRMG 407
++G RI+ G+ L + I+ A +G
Sbjct: 386 ANGIRIAACGIPKCQXTGLAEKIYNAXKSLG 416
>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
pdb|2X5F|B Chain B, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
Length = 430
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 30/300 (10%)
Query: 128 TIYIPQPTWGNHPKVF-TLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHAC 186
TI +P+ WGN+ VF T G +++TY +D L+E L++ ++++
Sbjct: 139 TILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGH-YTTDSLVEALQSYNKDKVIMILNY 197
Query: 187 AHNPTGVDPTLEQWEQIRQLMR---SKG--LLPFFDSAYQGFASGSLDADAQSVRMFVA- 240
+NPTG PT ++ I + ++ +KG ++ D AY G D + +F A
Sbjct: 198 PNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGL----FYEDVYTQSLFTAL 253
Query: 241 -----DGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPI 295
+ + K +G RVG ++ + +E+++K +IR SS P+
Sbjct: 254 TNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPL 313
Query: 296 HGASIVATILKDSTMY-KEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGM 354
S V +LK++ + KE ++ + +R ++ ++ A W G
Sbjct: 314 PTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVY----ADQYHSHWQAYDFNSGY 369
Query: 355 FTFTGLNSEQVAFMTK----EYHIYM----TSDGRISMAGLSSKTVPHLTDAIHAAVTRM 406
F ++ + K +Y I + +D RI+ + + +PH+ D+I A+ +
Sbjct: 370 FMAIKVHDVDPEALRKHLIDKYSIGVIALNATDIRIAFSCVEKDDIPHVFDSIAKAIDDL 429
>pdb|4EMY|A Chain A, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|B Chain B, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|C Chain C, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|D Chain D, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548
Length = 413
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 156/392 (39%), Gaps = 59/392 (15%)
Query: 34 LNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADS 93
+N +G ++GK + L V ++L D+S + Y PI G D+ K+ + G
Sbjct: 40 INAALGTLLDDKGKIIALPSVY--DRLDEXDRSHIASYAPIEGEKDYRKIVIDTLFGPYK 97
Query: 94 PAIKDNRVTTVQCLSGTGSLRV--------GAEFLARHYHQLTIYIPQPTWGNHPKVFTL 145
P + ++ + GTG++R G + Y+ W + K+
Sbjct: 98 P---EGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYY----------WAPYRKICEE 144
Query: 146 AGLSVKTYRYYDPATRGLNF------QGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQ 199
G + KT+ ++ T F + + E +R + A L+++ +NPTG + E+
Sbjct: 145 FGRNFKTFEFF---TDDFAFNIDVYKEAIDEGIRDSDRIA-SLINSPGNNPTGYSLSDEE 200
Query: 200 WEQIRQLM------RSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGE------CLV 247
W+++ + + K + D AY FA D D Q R F +V
Sbjct: 201 WDEVITFLKEKAEDKDKKITLIVDVAYLEFAG---DGDQQ--RKFFEKFSNLPRNLFVVV 255
Query: 248 AQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKD 307
A S +K+ YG R GA + ++++ E+ L R +S+ H A + L+
Sbjct: 256 AFSXSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSN-GTHAAQNILIELER 314
Query: 308 STMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTF--TGLNSEQV 365
+ K + EL + + + S D + I G FTF T + V
Sbjct: 315 AENKKIYEQELVDLRNXLKSRA----DVFVTAAKENKLTXIPYFGGFFTFIPTDKAFDIV 370
Query: 366 AFMTKE--YHIYMTSDGRISMAGLSSKTVPHL 395
+ KE + I R+++ G+ + +P L
Sbjct: 371 KDLEKENIFTIPSAKGIRVAICGVGEEKIPKL 402
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 166 QGLLEDLRAAPSGAIVLLHACA-HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA 224
G DL I+ C+ +NPTG T EQ Q+ + + G + +DSAY +
Sbjct: 187 NGFFPDLSTVGRTDIIFF--CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYX 244
Query: 225 SGSLDADAQSVRMFVADGGECLVAQ--SYAKNMGLYGERVG 263
S D +F G E + + S++K G G R+G
Sbjct: 245 S-----DDNPRSIFEIPGAEEVAXETASFSKYAGFTGVRLG 280
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 166 QGLLEDLRAAPSGAIVLLHACA-HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA 224
G DL I+ C+ +NPTG T EQ Q+ + + G + +DSAY +
Sbjct: 187 NGFFPDLSTVGRTDIIFF--CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYM 244
Query: 225 SGSLDADAQSVRMFVADGGE--CLVAQSYAKNMGLYGERVG 263
S D + +S+ F G E + S++K G G R+G
Sbjct: 245 S---DDNPRSI--FEIPGAEEVAMETASFSKYAGFTGVRLG 280
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Query: 168 LLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGS 227
DL P ++ +NPTG + +Q Q+ ++ G + FDSAY F
Sbjct: 203 FFPDLAMTPRTDVIFF-CSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIE-- 259
Query: 228 LDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVG 263
D +S+ + S++K G G R+G
Sbjct: 260 -DGSPRSIYEIPGAREVAIEVSSFSKFAGFTGVRLG 294
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 166 QGLLEDLRAAPSGAIVLLHACA-HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA 224
G DL I+ C+ +NPTG T EQ Q+ + + G + +DSAY +
Sbjct: 187 NGFFPDLSTVGRTDIIFF--CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYM 244
Query: 225 SGSLDADAQSVRMFVADGGE--CLVAQSYAKNMGLYGERVG 263
S D + +S+ F G E + S+++ G G R+G
Sbjct: 245 S---DDNPRSI--FEIPGAEEVAMETASFSQYAGFTGVRLG 280
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 166 QGLLEDLRAAPSGAIVLLHACA-HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFA 224
G DL I+ C+ +NPTG T EQ Q+ + + G + +DSAY +
Sbjct: 187 NGFFPDLSTVGRTDIIFF--CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYM 244
Query: 225 SGSLDADAQSVRMFVADGGE--CLVAQSYAKNMGLYGERVG 263
S D + +S+ F G E + S++ G G R+G
Sbjct: 245 S---DDNPRSI--FEIPGAEEVAMETASFSNYAGFTGVRLG 280
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 129 IYIPQPTWGNHPKVFTLA-GLSVKTYRYYDPATRGLNFQGLLEDLRAA--PSGAIVLLHA 185
+ IP P W ++P++ LA G V P T F+ E +R A P +++ +
Sbjct: 117 VIIPAPFWVSYPEMVKLAEGTPVIL-----PTTVETQFKVSPEQIRQAITPKTKLLVFNT 171
Query: 186 CAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADG--- 242
NPTG+ T ++ I Q+ GL D Y+ L DAQ + + A
Sbjct: 172 -PSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKI----LYDDAQHLSIGAASPEAY 226
Query: 243 GECLVAQSYAKNMGLYGERVGALS 266
+V +AK + G RVG L+
Sbjct: 227 ERSVVCSGFAKTYAMTGWRVGFLA 250
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 52/123 (42%), Gaps = 26/123 (21%)
Query: 169 LEDLRAAPSG----AIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLL-----PFFDSA 219
L DL+A P G A VLL +NPTG +E+ L R GL P+ D
Sbjct: 145 LADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQV 204
Query: 220 YQGFASGSL---DADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVAS 276
Y+G A L A + V +F S +K+ L G R+G +E+ +
Sbjct: 205 YEGEAPSPLALPGAKERVVELF-----------SLSKSYNLAGFRLG---FALGSEEALA 250
Query: 277 RVE 279
R+E
Sbjct: 251 RLE 253
>pdb|1TZB|A Chain A, Crystal Structure Of Native Phosphoglucose/phosphomannose
Isomerase From Pyrobaculum Aerophilum
pdb|1TZB|B Chain B, Crystal Structure Of Native Phosphoglucose/phosphomannose
Isomerase From Pyrobaculum Aerophilum
pdb|1TZC|A Chain A, Crystal Structure Of PhosphoglucosePHOSPHOMANNOSE
ISOMERASE FROM Pyrobaculum Aerophilum In Complex With
5-Phosphoarabinonate
pdb|1TZC|B Chain B, Crystal Structure Of PhosphoglucosePHOSPHOMANNOSE
ISOMERASE FROM Pyrobaculum Aerophilum In Complex With
5-Phosphoarabinonate
pdb|1X9H|A Chain A, Crystal Structure Of PhosphoglucosePHOSPHOMANNOSE
ISOMERASE FROM Pyrobaculum Aerophilum In Complex With
Fructose 6-Phosphate
pdb|1X9H|B Chain B, Crystal Structure Of PhosphoglucosePHOSPHOMANNOSE
ISOMERASE FROM Pyrobaculum Aerophilum In Complex With
Fructose 6-Phosphate
pdb|1X9I|A Chain A, Crystal Structure Of Crystal Structure Of
PhosphoglucosePHOSPHOMANNOSE
PHOSPHOGLUCOSEPHOSPHOMANNOSEISOMERASE From Pyrobaculum
Aerophilum In Complex With Glucose 6-Phosphate
pdb|1X9I|B Chain B, Crystal Structure Of Crystal Structure Of
PhosphoglucosePHOSPHOMANNOSE
PHOSPHOGLUCOSEPHOSPHOMANNOSEISOMERASE From Pyrobaculum
Aerophilum In Complex With Glucose 6-Phosphate
Length = 302
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 20/117 (17%)
Query: 277 RVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDAL 336
R+E+ +L I M G+ +VA +++D ++ W +E+ A+ D + R L A+
Sbjct: 33 RIEAMPRLYISGM------GGSGVVADLIRDFSLTWNWEVEVIAVKDYFLKARDGLLIAV 86
Query: 337 SARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVP 393
S G T L + + A + + +T+ GR++ G+ + VP
Sbjct: 87 SYSGN--------------TIETLYTVEYAKRRRIPAVAITTGGRLAQMGVPTVIVP 129
>pdb|3DEC|A Chain A, Crystal Structure Of A Glycosyl Hydrolases Family 2
Protein From Bacteroides Thetaiotaomicron
Length = 1000
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 17/124 (13%)
Query: 200 WEQIRQLMRSKGLLPFF----DSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNM 255
WE R ++ +G++ F+ + + G+ GS A + + DG + + Y +
Sbjct: 136 WEGRRVVLCCEGVISFYYVWVNGEFLGYNQGSKTAAEWDITDKLTDGENTIALEVYRWSS 195
Query: 256 GLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWT 315
G Y E C+ S +E + L YS+P + A T L + YKE
Sbjct: 196 GAYLE--------CQDXWRLSGIERDVYL-----YSTPEQYIADYKVTSLLEKEHYKEGI 242
Query: 316 LELK 319
EL+
Sbjct: 243 FELE 246
>pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 330
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 151 KTYRYYDPATRGLN---FQGLLEDLRAAPSGAIVLLHA-CAHNPTGVDPTLEQWEQIRQL 206
+ Y +YD R N ++ + P AIV C H G+ P L+ EQIR++
Sbjct: 134 RIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHG--GLSPDLQSMEQIRRI 191
Query: 207 MR 208
MR
Sbjct: 192 MR 193
>pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8A|B Chain B, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8G|A Chain A, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
pdb|2O8G|B Chain B, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
Length = 329
Score = 31.2 bits (69), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 151 KTYRYYDPATRGLN---FQGLLEDLRAAPSGAIVLLHA-CAHNPTGVDPTLEQWEQIRQL 206
+ Y +YD R N ++ + P AIV C H G+ P L+ EQIR++
Sbjct: 138 RIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHG--GLSPDLQSMEQIRRI 195
Query: 207 MR 208
MR
Sbjct: 196 MR 197
>pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound
To Protein Phosphatase-1
pdb|1IT6|A Chain A, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|1IT6|B Chain B, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|2BCD|A Chain A, X-Ray Crystal Structure Of Protein Phosphatase-1 With The
Marine Toxin Motuporin Bound
pdb|2BDX|A Chain A, X-Ray Crystal Structure Of Dihydromicrocystin-La Bound To
Protein Phosphatase-1
Length = 323
Score = 31.2 bits (69), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 151 KTYRYYDPATRGLN---FQGLLEDLRAAPSGAIVLLHA-CAHNPTGVDPTLEQWEQIRQL 206
+ Y +YD R N ++ + P AIV C H G+ P L+ EQIR++
Sbjct: 132 RIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHG--GLSPDLQSMEQIRRI 189
Query: 207 MR 208
MR
Sbjct: 190 MR 191
>pdb|3N5U|A Chain A, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
pdb|3N5U|B Chain B, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
Length = 300
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 151 KTYRYYDPATRGLN---FQGLLEDLRAAPSGAIVLLHA-CAHNPTGVDPTLEQWEQIRQL 206
+ Y +YD R N ++ + P AIV C H G+ P L+ EQIR++
Sbjct: 132 RIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHG--GLSPDLQSMEQIRRI 189
Query: 207 MR 208
MR
Sbjct: 190 MR 191
>pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin
Hybrid Bound To Okadaic Acid
Length = 293
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 151 KTYRYYDPATRGLN---FQGLLEDLRAAPSGAIVLLHA-CAHNPTGVDPTLEQWEQIRQL 206
+ Y +YD R N ++ + P AIV C H G+ P L+ EQIR++
Sbjct: 127 RIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHG--GLSPDLQSMEQIRRI 184
Query: 207 MR 208
MR
Sbjct: 185 MR 186
>pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
pdb|1FJM|B Chain B, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
Length = 330
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 151 KTYRYYDPATRGLN---FQGLLEDLRAAPSGAIVLLHA-CAHNPTGVDPTLEQWEQIRQL 206
+ Y +YD R N ++ + P AIV C H G+ P L+ EQIR++
Sbjct: 132 RIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHG--GLSPDLQSMEQIRRI 189
Query: 207 MR 208
MR
Sbjct: 190 MR 191
>pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
pdb|4G9J|B Chain B, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
Length = 331
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 151 KTYRYYDPATRGLN---FQGLLEDLRAAPSGAIVLLHA-CAHNPTGVDPTLEQWEQIRQL 206
+ Y +YD R N ++ + P AIV C H G+ P L+ EQIR++
Sbjct: 133 RIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHG--GLSPDLQSMEQIRRI 190
Query: 207 MR 208
MR
Sbjct: 191 MR 192
>pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|C Chain C, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|E Chain E, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|G Chain G, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
Length = 306
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 151 KTYRYYDPATRGLN---FQGLLEDLRAAPSGAIVLLHA-CAHNPTGVDPTLEQWEQIRQL 206
+ Y +YD R N ++ + P AIV C H G+ P L+ EQIR++
Sbjct: 131 RIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHG--GLSPDLQSMEQIRRI 188
Query: 207 MR 208
MR
Sbjct: 189 MR 190
>pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7A|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7B|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
pdb|3E7B|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
Length = 299
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 151 KTYRYYDPATRGLN---FQGLLEDLRAAPSGAIVLLHA-CAHNPTGVDPTLEQWEQIRQL 206
+ Y +YD R N ++ + P AIV C H G+ P L+ EQIR++
Sbjct: 131 RIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHG--GLSPDLQSMEQIRRI 188
Query: 207 MR 208
MR
Sbjct: 189 MR 190
>pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGG|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGH|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3EGH|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3HVQ|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
pdb|3HVQ|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
Length = 329
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 151 KTYRYYDPATRGLN---FQGLLEDLRAAPSGAIVLLHA-CAHNPTGVDPTLEQWEQIRQL 206
+ Y +YD R N ++ + P AIV C H G+ P L+ EQIR++
Sbjct: 131 RIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHG--GLSPDLQSMEQIRRI 188
Query: 207 MR 208
MR
Sbjct: 189 MR 190
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 114/292 (39%), Gaps = 40/292 (13%)
Query: 129 IYIPQPTWGNH-PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACA 187
+ IP P + ++ P V G V+ Y + R LN L + + A+++ C
Sbjct: 114 VLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFR-LNVDEL-KKYVTDKTRALIINSPC- 170
Query: 188 HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADG--GEC 245
NPTG T + E+I + L+ D Y+ F + DA+ + DG
Sbjct: 171 -NPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHF----IYDDARHYSIASLDGMFERT 225
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSS--PPIHGASIVAT 303
+ ++K + G R+G ++ +E +K MY++ P A
Sbjct: 226 ITVNGFSKTFAMTGWRLGFVAAPSWI------IERMVKF---QMYNATCPVTFIQYAAAK 276
Query: 304 ILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTF------ 357
LKD +K E++ DR R+ ++ L+ G P +K G F
Sbjct: 277 ALKDERSWKA-VEEMRKEYDR---RRKLVWKRLNEMGLP-----TVKPKGAFYIFPRIRD 327
Query: 358 TGLNSEQVA-FMTKEYHIYMTSDGRISMAGLSSKTVPHLT--DAIHAAVTRM 406
TGL S++ + M KE + + AG + + T + + A+ RM
Sbjct: 328 TGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRM 379
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 114/292 (39%), Gaps = 40/292 (13%)
Query: 129 IYIPQPTWGNH-PKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACA 187
+ IP P + ++ P V G V+ Y + R LN L + + A+++ C
Sbjct: 113 VLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFR-LNVDEL-KKYVTDKTRALIINSPC- 169
Query: 188 HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADG--GEC 245
NPTG T + E+I + L+ D Y+ F + DA+ + DG
Sbjct: 170 -NPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHF----IYDDARHYSIASLDGMFERT 224
Query: 246 LVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSS--PPIHGASIVAT 303
+ ++K + G R+G ++ +E +K MY++ P A
Sbjct: 225 ITVNGFSKTFAMTGWRLGFVAAPSWI------IERMVKF---QMYNATCPVTFIQYAAAK 275
Query: 304 ILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTF------ 357
LKD +K E++ DR R+ ++ L+ G P +K G F
Sbjct: 276 ALKDERSWKA-VEEMRKEYDR---RRKLVWKRLNEMGLP-----TVKPKGAFYIFPRIRD 326
Query: 358 TGLNSEQVA-FMTKEYHIYMTSDGRISMAGLSSKTVPHLT--DAIHAAVTRM 406
TGL S++ + M KE + + AG + + T + + A+ RM
Sbjct: 327 TGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMERM 378
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 180 IVLLHACA-HNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMF 238
I +L C+ +NPTG +Q I +L FD+AY F S D
Sbjct: 164 IDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFIS---DPSLPKSIFE 220
Query: 239 VADGGECLVA-QSYAKNMGLYGERVG 263
+ D C + S++K +G G R+G
Sbjct: 221 IPDARFCAIEINSFSKPLGFAGIRLG 246
>pdb|3UGB|A Chain A, Ubch5c~ubiquitin Conjugate
Length = 147
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 364 QVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLT 396
+VAF T+ YH + S+G IS+ L S+ P LT
Sbjct: 66 KVAFTTRIYHPNINSNGSISLDILRSQWSPALT 98
>pdb|3A33|A Chain A, Ubch5b~ubiquitin Conjugate
Length = 150
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 364 QVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLT 396
+VAF T+ YH + S+G IS+ L S+ P LT
Sbjct: 69 KVAFTTRIYHPNINSNGSISLDILRSQWSPALT 101
>pdb|4AUQ|A Chain A, Structure Of Birc7-Ubch5b-Ub Complex.
pdb|4AUQ|D Chain D, Structure Of Birc7-Ubch5b-Ub Complex
Length = 147
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 360 LNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLT 396
+VAF T+ YH + S+G IS+ L S+ P LT
Sbjct: 62 FKPPKVAFTTRIYHPAINSNGSISLDILRSQWSPALT 98
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 153 YRYYDPATRGLNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGL 212
Y D GL+ GL E +A GA V L + +NP GV + E+ QI L G
Sbjct: 157 YVSADETRAGLDLTGLEEAFKA---GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGA 213
Query: 213 LPFFDSAY 220
D Y
Sbjct: 214 TVIADQLY 221
>pdb|2WD6|A Chain A, Crystal Structure Of The Variable Domain Of The
Streptococcus Gordonii Surface Protein Sspb
pdb|2WD6|B Chain B, Crystal Structure Of The Variable Domain Of The
Streptococcus Gordonii Surface Protein Sspb
Length = 349
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 191 TGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADA-QSVRMF 238
T ++ ++ +++ QLM G L F S +G SG++D DA +SVR F
Sbjct: 173 TNINVKVKFYDEEGQLMNLTGGLVNFSSLNRGNGSGAIDKDAIESVRNF 221
>pdb|4DDG|A Chain A, Crystal Structure Of Human Otub1UBCH5B~UBUB
pdb|4DDG|B Chain B, Crystal Structure Of Human Otub1UBCH5B~UBUB
pdb|4DDG|C Chain C, Crystal Structure Of Human Otub1UBCH5B~UBUB
pdb|4DDG|J Chain J, Crystal Structure Of Human Otub1UBCH5B~UBUB
pdb|4DDG|K Chain K, Crystal Structure Of Human Otub1UBCH5B~UBUB
pdb|4DDG|L Chain L, Crystal Structure Of Human Otub1UBCH5B~UBUB
pdb|4DDI|A Chain A, Crystal Structure Of Human Otub1UBCH5B~UBUB
pdb|4DDI|B Chain B, Crystal Structure Of Human Otub1UBCH5B~UBUB
pdb|4DDI|C Chain C, Crystal Structure Of Human Otub1UBCH5B~UBUB
Length = 399
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 364 QVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLT 396
+VAF T+ YH + S+G IS+ L S+ P LT
Sbjct: 68 KVAFTTRIYHPNINSNGSISLDILRSQWSPALT 100
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 14/107 (13%)
Query: 163 LNFQGLLEDLRAAPSGAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGL---LPFF--- 216
++F L E + A G I+ +NP+G + E +++ L+ K P F
Sbjct: 160 IDFDALEERINAHTRGVII---NSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIA 216
Query: 217 DSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVG 263
D Y+ + D V LV SY+K++ L GER+G
Sbjct: 217 DEPYR-----EIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIG 258
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 119 FLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLED-LRAAPS 177
LA H TI +P P++ H +AG V++ P G++F LE +R +
Sbjct: 116 MLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSV----PLVPGIDFFNELERAIRESIP 171
Query: 178 GAIVLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAY 220
+++ NPT L+ +E++ L + ++ D AY
Sbjct: 172 KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAY 214
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 181 VLLHACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVA 240
++ +NPTG T Q ++ R G + +D+AY + S + D +
Sbjct: 212 IIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYIS---NPDCPKTIYEIP 268
Query: 241 DGGECLVAQ-SYAKNMGLYGERVG 263
E + S++K G G R+G
Sbjct: 269 GADEVAIETCSFSKYAGFTGVRLG 292
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,949,375
Number of Sequences: 62578
Number of extensions: 503593
Number of successful extensions: 1349
Number of sequences better than 100.0: 99
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1145
Number of HSP's gapped (non-prelim): 99
length of query: 407
length of database: 14,973,337
effective HSP length: 101
effective length of query: 306
effective length of database: 8,652,959
effective search space: 2647805454
effective search space used: 2647805454
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)